Citrus Sinensis ID: 046395
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 535 | 2.2.26 [Sep-21-2011] | |||||||
| Q5B5X8 | 405 | Probable glucan 1,3-beta- | no | no | 0.519 | 0.686 | 0.332 | 7e-37 | |
| Q7Z9L3 | 405 | Glucan 1,3-beta-glucosida | yes | no | 0.542 | 0.716 | 0.311 | 2e-36 | |
| B8N151 | 405 | Probable glucan 1,3-beta- | N/A | no | 0.542 | 0.716 | 0.311 | 2e-36 | |
| P29717 | 438 | Glucan 1,3-beta-glucosida | N/A | no | 0.523 | 0.639 | 0.309 | 2e-35 | |
| A2RAR6 | 416 | Probable glucan 1,3-beta- | yes | no | 0.543 | 0.699 | 0.316 | 8e-35 | |
| Q4WK60 | 416 | Probable glucan 1,3-beta- | yes | no | 0.542 | 0.697 | 0.327 | 2e-34 | |
| B0XN12 | 416 | Probable glucan 1,3-beta- | N/A | no | 0.542 | 0.697 | 0.321 | 2e-34 | |
| Q96V64 | 426 | Glucan 1,3-beta-glucosida | N/A | no | 0.523 | 0.657 | 0.323 | 3e-34 | |
| A1CRV0 | 415 | Probable glucan 1,3-beta- | N/A | no | 0.540 | 0.696 | 0.315 | 4e-34 | |
| Q12725 | 421 | Glucan 1,3-beta-glucosida | yes | no | 0.523 | 0.665 | 0.315 | 1e-33 |
| >sp|Q5B5X8|EXGA_EMENI Probable glucan 1,3-beta-glucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=exgA PE=3 SV=2 | Back alignment and function desciption |
|---|
Score = 155 bits (392), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 164/328 (50%), Gaps = 50/328 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY +T G ++AA + +HW ++ITEEDF +++ GLN VRIP+G+W A P +P+V
Sbjct: 59 EYTLTEVLGVEEAAARLSEHWNTFITEEDFALIAEAGLNYVRIPIGYWAAA-PLDGEPYV 117
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSD-IQETVAII 275
G L+ LDNA WA+ + +KVIVDLH SQNG +SG R G W D +++T+
Sbjct: 118 SGQLEHLDNAVAWARAHNLKVIVDLHGAPGSQNGFDNSGRR-GPIGWQQGDTVEQTILAF 176
Query: 276 DFLASRY-ADHPSLVAIELMNEPKAP-DLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333
+ LA RY AD ++ IE +NEP P + D LK YY+ VRK S A ++L +
Sbjct: 177 ETLAQRYLADDDTVTMIEALNEPHVPGGINQDQLKDYYEETLARVRKNSPEATLLLHD-- 234
Query: 334 GGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGP 393
G +E + V++D H Y +F N S++++ID + L+ +D P
Sbjct: 235 GFVQTEGWNGFMTGENVMMDTHHYEVFEGGQNAWSIEKHIDAACQLGRQHLQ---AADKP 291
Query: 394 LSFVGEW-------------------------------SCEWEAEGASK-------RDYQ 415
+ VGEW +C ++EG+ + +
Sbjct: 292 V-IVGEWTGALSDCTRYLNGKGIGIRYDGTLGSNTAVGACGSKSEGSVAGLSADEIANTR 350
Query: 416 RFAEAQLDVYGRATFGWAYWAYKFAESP 443
RF EAQLD + GW +W +K +P
Sbjct: 351 RFIEAQLDAF-ELRNGWVFWTWKTEGAP 377
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) (taxid: 227321) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 5EC: 8 |
| >sp|Q7Z9L3|EXGA_ASPOR Glucan 1,3-beta-glucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=exgA PE=1 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 161/343 (46%), Gaps = 53/343 (15%)
Query: 143 PSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVG 202
PS+F+ + E+ +T G ++A + HWKS+++ DF+ M+ GLN VRIP+G
Sbjct: 48 PSIFDAAGAEAVD-EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIG 106
Query: 203 WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262
+W A P P+V G L+ LD A WA G+KV++DLH SQNG +SG R Q
Sbjct: 107 YW-ALGPLEGDPYVDGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRRGAIQ- 164
Query: 263 WSDSD-IQETVAIIDFLASRYADHPSLVAIELMNEPKAP-DLKLDSLKTYYKAGYDTVRK 320
W D +++T+ D LA RY ++ AIE +NEP P + L+ YY + Y V K
Sbjct: 165 WQQGDTVEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNK 224
Query: 321 YSSSAYVILSNRL--GGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYR 378
Y++ V+ + W+ F + S+VV+D H Y++F + M + +ID + +
Sbjct: 225 YNAGTSVVYGDGFLPVESWN---GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQ 281
Query: 379 QRSSDLRNVTTSDGPLSFVGEWS-------------------------------CEWEAE 407
L SD P+ VGEW+ C A
Sbjct: 282 FAHQHLE---ASDKPV-IVGEWTGAVTDCAKYLNGKGNGARYDGSYAADKAIGDCSSLAT 337
Query: 408 G-------ASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443
G + D +RF EAQLD + GW +W +K +P
Sbjct: 338 GFVSKLSDEERSDMRRFIEAQLDAF-ELKSGWVFWTWKTEGAP 379
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|B8N151|EXGA_ASPFN Probable glucan 1,3-beta-glucosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 161/343 (46%), Gaps = 53/343 (15%)
Query: 143 PSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVG 202
PS+F+ + E+ +T G ++A + HWKS+++ DF+ M+ GLN VRIP+G
Sbjct: 48 PSIFDAAGAEAVD-EWSLTKILGKEEAEARLSAHWKSFVSAGDFQRMADAGLNHVRIPIG 106
Query: 203 WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262
+W A P P+V G L+ LD A WA G+KV++DLH SQNG +SG R Q
Sbjct: 107 YW-ALGPLEGDPYVDGQLEYLDKAVEWAGAAGLKVLIDLHGAPGSQNGFDNSGRRGAIQ- 164
Query: 263 WSDSD-IQETVAIIDFLASRYADHPSLVAIELMNEPKAP-DLKLDSLKTYYKAGYDTVRK 320
W D +++T+ D LA RY ++ AIE +NEP P + L+ YY + Y V K
Sbjct: 165 WQQGDTVEQTLDAFDLLAERYLGSDTVAAIEAINEPNIPGGVDQGKLQEYYGSVYGIVNK 224
Query: 321 YSSSAYVILSNRL--GGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYR 378
Y++ V+ + W+ F + S+VV+D H Y++F + M + +ID + +
Sbjct: 225 YNAGTSVVYGDGFLPVESWN---GFKTEGSKVVMDTHHYHMFDNGLIAMDIDSHIDAVCQ 281
Query: 379 QRSSDLRNVTTSDGPLSFVGEWS-------------------------------CEWEAE 407
L SD P+ VGEW+ C A
Sbjct: 282 FAHQHLE---ASDKPV-IVGEWTGAVTDCAKYLNGKGNGARYDGSYAADKAIGDCSSLAT 337
Query: 408 G-------ASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443
G + D +RF EAQLD + GW +W +K +P
Sbjct: 338 GFVSKLSDEERSDMRRFIEAQLDAF-ELKSGWVFWTWKTEGAP 379
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) (taxid: 332952) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|P29717|EXG_CANAL Glucan 1,3-beta-glucosidase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=XOG1 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 165/330 (50%), Gaps = 50/330 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A+++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 277 FLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWD-----NFN-KMSVQQNIDYIYRQRSS--- 382
++ G W+ L+ A VV+D H Y +F N N +SV N + ++ S
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 327
Query: 383 ----------------------------DLRNVTTSDGPLSFVGEWSCEWEAEGASKRDY 414
D S PL + +WS E K D
Sbjct: 328 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDE------HKTDT 381
Query: 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+R+ EAQLD + T GW +W++K +P+
Sbjct: 382 RRYIEAQLDAF-EYTGGWVFWSWKTENAPE 410
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A2RAR6|EXGA_ASPNC Probable glucan 1,3-beta-glucosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 149 bits (375), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 108/341 (31%), Positives = 163/341 (47%), Gaps = 50/341 (14%)
Query: 143 PSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVG 202
PS+++ T + E+ + G D+A + HW S+IT+ DF M+Q GLN VRIP+G
Sbjct: 59 PSLYDSTGGGAVD-EWTLCQILGKDEAQAKLSSHWSSFITQSDFDRMAQAGLNHVRIPIG 117
Query: 203 WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262
+W A P +P+V G + LD A WA+ G+KV+VDLH SQNG +SG R Q
Sbjct: 118 YW-AVAPIDGEPYVSGQIDYLDQAVTWARAAGLKVLVDLHGAPGSQNGFDNSGHRGPIQ- 175
Query: 263 WSDSD-IQETVAIIDFLASRYADHPSLVAIELMNEPKAP-DLKLDSLKTYYKAGYDTVRK 320
W D + +T+ D LA RYA ++ AIE +NEP P + D LK YY V++
Sbjct: 176 WQQGDTVNQTMTAFDALARRYAQSDTVTAIEAVNEPNIPGGVNEDGLKNYYYGALADVQR 235
Query: 321 YSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQR 380
+ S + +S+ G + E + S VV+D H Y +F MS+ D++
Sbjct: 236 LNPSTTLFMSD--GFQPVESWNGFMQGSNVVMDTHHYQVFDTGLLSMSID---DHVKTAC 290
Query: 381 SSDLRNVTTSDGPLSFVGEWS-------------------------------CEWEAEGA 409
S ++ SD P+ VGEW+ C ++ G+
Sbjct: 291 SLATQHTMQSDKPV-VVGEWTGALTDCAKYLNGVGNAARYDGTYMSTTKYGDCTGKSTGS 349
Query: 410 -------SKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443
K + +R+ EAQL+ Y + GW +W +K +P
Sbjct: 350 VADFSADEKANTRRYIEAQLEAYEMKS-GWLFWTWKTEGAP 389
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q4WK60|EXGA_ASPFU Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 164/342 (47%), Gaps = 52/342 (15%)
Query: 143 PSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVG 202
PS+F+ + + E+ +T G D+A ++ HW ++IT++DF+ ++Q G+N VRIP+G
Sbjct: 59 PSIFDNAGDAAVD-EWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIG 117
Query: 203 WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262
+W A P +P+V G L+ LDNA WA++ G+KV++DLH SQNG +SG R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 263 WSDSD-IQETVAIIDFLASRYADHPSLV-AIELMNEPKAP-DLKLDSLKTYYKAGYDTVR 319
W D + +TV LA RY +V AIE +NEP P + L+ YY D VR
Sbjct: 176 WQQGDTVSQTVDAFRALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVVR 235
Query: 320 KYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQ 379
+ V LS+ G +E + VV+D H Y +F DN+ + +ID +
Sbjct: 236 QIDPGTSVFLSD--GFLSTESWNGFKTGEDVVMDTHHYEMF-DNY---LISLDIDGHVKS 289
Query: 380 RSSDLRNVTTSDGPLSFVGEWS-----C--EWEAEGASKR-------------------- 412
+ + SD P+ VGEWS C +G S R
Sbjct: 290 ACDFGKQIEGSDKPV-VVGEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTTQG 348
Query: 413 -----------DYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443
D +RF EAQLD Y GW +W +K +P
Sbjct: 349 SVADLSDQERTDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAP 389
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|B0XN12|EXGA_ASPFC Probable glucan 1,3-beta-glucosidase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=exgA PE=3 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/342 (32%), Positives = 164/342 (47%), Gaps = 52/342 (15%)
Query: 143 PSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVG 202
PS+F+ + + E+ +T G D+A ++ HW ++IT++DF+ ++Q G+N VRIP+G
Sbjct: 59 PSIFDNAGDAAVD-EWTLTATLGQDQAKAVLSQHWSTFITQDDFQQIAQAGMNHVRIPIG 117
Query: 203 WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262
+W A P +P+V G L+ LDNA WA++ G+KV++DLH SQNG +SG R G
Sbjct: 118 YW-AVSSLPDEPYVDGQLEYLDNAISWAREAGLKVVIDLHGAPGSQNGFDNSG-RKGPIA 175
Query: 263 WSDSD-IQETVAIIDFLASRYADHPSLV-AIELMNEPKAP-DLKLDSLKTYYKAGYDTVR 319
W D + +TV LA RY +V AIE +NEP P + L+ YY D VR
Sbjct: 176 WQQGDTVSQTVDAFRALAERYLPQSDVVTAIEALNEPNIPGGVSEAGLRDYYNQIADVVR 235
Query: 320 KYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQ 379
+ V LS+ G +E + VV+D H Y +F DN+ + +ID +
Sbjct: 236 QIDPDTSVFLSD--GFLSTESWNGFKTGEDVVMDTHHYEMF-DNY---LISLDIDGHVKS 289
Query: 380 RSSDLRNVTTSDGPLSFVGEWS-------------------------------CEWEAEG 408
+ + SD P+ VGEWS C +G
Sbjct: 290 ACDFGKQIEGSDKPV-VVGEWSGAVTDCTKHLNGKGVSTRYQGEYANNVKYGDCANTTQG 348
Query: 409 A-------SKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443
+ + D +RF EAQLD Y GW +W +K +P
Sbjct: 349 SVADLSDQERTDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAP 389
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q96V64|EXG_BLUGR Glucan 1,3-beta-glucosidase OS=Blumeria graminis PE=3 SV=1 | Back alignment and function description |
|---|
Score = 147 bits (370), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 154/331 (46%), Gaps = 51/331 (15%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G D+A + +HW ++ITEEDF ++ GLN VRIP+G+W A P P+V
Sbjct: 69 EYSYTAALGKDEAFTRLNNHWATWITEEDFAEIASMGLNHVRIPIGYW-ALVAIPNDPYV 127
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSD-IQETVAII 275
G L +D A WA+K G+KV++DLH SQNG +SG R G W D + T+ I
Sbjct: 128 QGQLSYVDRAIDWARKNGLKVMLDLHGAPGSQNGFDNSG-RTGTIAWQSGDNVPNTLRAI 186
Query: 276 DFLASRYADHPSLV-AIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG 334
LA RYA +V AIEL+NEP L +K +Y G+ VR +A I L
Sbjct: 187 QALAERYAPQTDVVTAIELLNEPANWGNDLSQIKKFYYDGWGNVRTQGQTAVTIHDAFLD 246
Query: 335 GE-WSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGP 393
W+ ++ + ++ V++D H Y +F N M ++ + S + + +D
Sbjct: 247 PRSWNGFMNSEAGVNNVILDTHIYQVFSQNEVAMKPCAHV----QTACSSIDKIKPTD-K 301
Query: 394 LSFVGEW---------------------------------SCEWEAEG-------ASKRD 413
+ VGEW SC+ + EG K +
Sbjct: 302 WTIVGEWTGAQTDCAKWLNGLGKGARYDGTLPGHSEGYYGSCDKKYEGTVDSMLPVDKTN 361
Query: 414 YQRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
Q F EAQLD Y T GW +W +K +P+
Sbjct: 362 LQYFVEAQLDAYESHT-GWFFWTWKTESAPE 391
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Blumeria graminis (taxid: 34373) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|A1CRV0|EXGA_ASPCL Probable glucan 1,3-beta-glucosidase A OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=exgA PE=3 SV=2 | Back alignment and function description |
|---|
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/342 (31%), Positives = 164/342 (47%), Gaps = 53/342 (15%)
Query: 143 PSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVG 202
PS+F + + E+ + G DKA ++ HW S+IT++DF ++Q G+N VRIPVG
Sbjct: 59 PSIFENGGGAAVD-EWTLAEVLGKDKARAILSQHWSSFITQDDFNQIAQAGMNHVRIPVG 117
Query: 203 WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262
+W P +P+V G L+ LDNA WA+ G+KV++DLH SQNG +SG R G
Sbjct: 118 YWAV--SAPDEPYVDGQLEFLDNAISWARAAGLKVMIDLHGAPGSQNGFDNSG-RKGPIA 174
Query: 263 WSDSD-IQETVAIIDFLASRYADHPSLV-AIELMNEPKAP-DLKLDSLKTYYKAGYDTVR 319
W D + TV LA RY +V AIE +NEP P + LK YY + V
Sbjct: 175 WQQGDTVARTVDAFKALAERYLPESDVVTAIEAVNEPNIPGGVNEGQLKEYYNQVLEVVH 234
Query: 320 KYSSSAYVILSNRLGGEWSELLSFAS-----NLSRVVIDVHFYNLFWDNFNKMSVQQNI- 373
+ A V LS+ L+ AS N VV+D H Y++F + + + ++
Sbjct: 235 SINPDAGVFLSDG-------FLATASWNGYANGENVVMDTHHYHMFDNTLISLDINAHVR 287
Query: 374 ---DYIYRQRSSD---------------LRNVTTSDGPLSFVGEWS-------CEWEAEG 408
++ + + SD +++ D P + G+W+ C + +G
Sbjct: 288 AACEFGNQIKGSDKPVVVGEWTGALTDCTKHLNGKDIPTRYEGQWANSPRYGDCGNKRQG 347
Query: 409 AS-------KRDYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443
+S + D +RF EAQLD Y GW +W +K +P
Sbjct: 348 SSSGLSEQERSDTRRFIEAQLDAY-EGKNGWLFWTWKTEGAP 388
|
Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase. Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
| >sp|Q12725|EXG_YARLI Glucan 1,3-beta-glucosidase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=EXG1 PE=3 SV=2 | Back alignment and function description |
|---|
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 168/320 (52%), Gaps = 40/320 (12%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQN-GLNAVRIPVGWWIAYDPKPPKPF 215
EY T G ++A K + DHW ++ITE D K +++N LN VRIP+G+W A+ P P+
Sbjct: 71 EYHYTAWLGKEEAEKRLTDHWNTWITEYDIKAIAENYKLNLVRIPIGYW-AFSLLPNDPY 129
Query: 216 VGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSD-IQETVAI 274
V G LD A W +KYG+K VD+H + SQNG +SG RD + +W ++D +Q ++ +
Sbjct: 130 VQGQEAYLDRALGWCRKYGVKAWVDVHGVPGSQNGFDNSGLRDHW-DWPNADNVQHSINV 188
Query: 275 IDFLASRYAD---HPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331
I+++A +Y + +V IEL+NEP P + ++ ++ Y++ G+ TVR S V++ +
Sbjct: 189 INYIAGKYGAPEYNDIVVGIELVNEPLGPAIGMEVIEKYFQEGFWTVRHAGSDTAVVIHD 248
Query: 332 RLGGE--WSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNI------------DY-- 375
+ ++ ++ VV+D H Y +F ++ Q+I +Y
Sbjct: 249 AFQEKNYFNNFMTTEQGFWNVVLDHHQYQVFSPGELARNIDQHIAEVCNVGRQASTEYHW 308
Query: 376 -IYRQRSSDLRNVT-----TSDGPL---SFVGEW---SCEWEAEGAS-----KRDYQRFA 418
I+ + S+ L + T GP SF G + SC+ + + K++ +R+
Sbjct: 309 RIFGEWSAALTDCTHWLNGVGKGPRLDGSFPGSYYQRSCQGRGDIQTWSEQDKQESRRYV 368
Query: 419 EAQLDVYGRATFGWAYWAYK 438
EAQLD + GW YW YK
Sbjct: 369 EAQLDAWEHGGDGWIYWTYK 388
|
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591) EC: 3 EC: . EC: 2 EC: . EC: 1 EC: . EC: 5 EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 535 | ||||||
| 359497371 | 529 | PREDICTED: probable glucan 1,3-beta-gluc | 0.818 | 0.827 | 0.689 | 1e-178 | |
| 296086868 | 486 | unnamed protein product [Vitis vinifera] | 0.811 | 0.893 | 0.693 | 1e-177 | |
| 296086866 | 537 | unnamed protein product [Vitis vinifera] | 0.842 | 0.839 | 0.656 | 1e-176 | |
| 224093776 | 455 | predicted protein [Populus trichocarpa] | 0.811 | 0.953 | 0.680 | 1e-174 | |
| 147795863 | 610 | hypothetical protein VITISV_000586 [Viti | 0.831 | 0.729 | 0.646 | 1e-170 | |
| 224081170 | 481 | predicted protein [Populus trichocarpa] | 0.814 | 0.906 | 0.651 | 1e-168 | |
| 357455945 | 491 | Glucan 1,3-beta-glucosidase [Medicago tr | 0.807 | 0.879 | 0.622 | 1e-161 | |
| 388491144 | 497 | unknown [Medicago truncatula] | 0.809 | 0.871 | 0.628 | 1e-161 | |
| 289540917 | 504 | unknown [Trifolium repens] | 0.809 | 0.859 | 0.642 | 1e-160 | |
| 357455947 | 497 | Glucan 1,3-beta-glucosidase [Medicago tr | 0.809 | 0.871 | 0.628 | 1e-160 |
| >gi|359497371|ref|XP_003635494.1| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Vitis vinifera] gi|296080899|emb|CBI18831.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1623), Expect = e-178, Method: Compositional matrix adjust.
Identities = 307/445 (68%), Positives = 368/445 (82%), Gaps = 7/445 (1%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P++F GI N DLLDGTQVQ +STKL+KYL+AENG T ++AN SSS W+TFRLWR
Sbjct: 50 MKPSLFSGIPNQDLLDGTQVQFMSTKLQKYLSAENGGGTDVVANRTSSS--GWETFRLWR 107
Query: 61 INETFYNFRLSNKQFIGLENQG--NKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGY 118
INE+ +N R+ NKQF GLENQG NK+VAV + E FQI RKN + +RVR +ASNG
Sbjct: 108 INESTFNLRVFNKQFFGLENQGKGNKVVAVLNSPGNSETFQIVRKNDDRNRVRIKASNGL 167
Query: 119 FLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWK 178
FLQAK + VTADY G S W++N+PSVF+M IV T+ GEYQITNGYGPD+A ++M+DHW
Sbjct: 168 FLQAKPGL-VTADYGG-SGWDDNNPSVFHMKIVRTLQGEYQITNGYGPDRAPQVMQDHWN 225
Query: 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
+YIT EDF+F+S NGLNAVRIPVGWWIA DP PPKPFVGGSL+ALDNAF WAQ GMK+I
Sbjct: 226 AYITNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKII 285
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298
VDLHA++ SQNG+ HSG+RDGFQEW DS+IQ+TVA+IDFLA+RYA++PSL AIELMNEP
Sbjct: 286 VDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLAAIELMNEPL 345
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-GEWSELLSFASNLSRVVIDVHFY 357
AP + L+ LK YYKAGYD VRKY+S+AYVILSNRLG + ELL FA +L+RVVIDVH+Y
Sbjct: 346 APGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKELLDFARSLNRVVIDVHYY 405
Query: 358 NLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRF 417
+LF D FN M+VQQNID+IY QR+SDL VTTS+GPLSFVGEW+ EW GA K DYQRF
Sbjct: 406 SLFSDMFNNMNVQQNIDFIYNQRASDLSAVTTSNGPLSFVGEWTAEWAKSGAPKEDYQRF 465
Query: 418 AEAQLDVYGRATFGWAYWAYKFAES 442
A+AQ+DVYGRATFGWAYWAY+ A++
Sbjct: 466 AKAQIDVYGRATFGWAYWAYRCAQN 490
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086868|emb|CBI33035.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 306/441 (69%), Positives = 364/441 (82%), Gaps = 7/441 (1%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P++F GI N DLLDGTQVQ +STKL+KYL+AENG T ++AN +S S W+TFRLWR
Sbjct: 50 MKPSLFAGIPNQDLLDGTQVQFMSTKLQKYLSAENGGGTDVVANR--TSPSGWETFRLWR 107
Query: 61 INETFYNFRLSNKQFIGLENQG--NKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGY 118
INE+ +N R+ NKQF GLENQG NK+VAV + E FQI RKN + +RVR +ASNG
Sbjct: 108 INESTFNLRVFNKQFFGLENQGKGNKVVAVLNSPGNSETFQIVRKNDDRNRVRIKASNGL 167
Query: 119 FLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWK 178
FLQAK + VTADY G S W++N+PSVF M IV T+ GEYQITNGYGPD+A ++M+DHW
Sbjct: 168 FLQAKPGL-VTADYGG-SGWDDNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWN 225
Query: 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
+YIT EDF+F+S NGLNAVRIPVGWWIA DP PPKPFVGGSL+ALDNAF WAQ GMK+I
Sbjct: 226 AYITNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKII 285
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298
VDLHA++ SQNG+ HSG+RDGFQEW DS+IQ+TVA+IDFLA+RYA++PSL AIELMNEP
Sbjct: 286 VDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLAAIELMNEPL 345
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-GEWSELLSFASNLSRVVIDVHFY 357
AP + L+ LK YYKAGYD VRKY+S+AYVILSNRLG + ELL FA L+RVVIDVH+Y
Sbjct: 346 APGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYY 405
Query: 358 NLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRF 417
+LF D FN M+VQQNID+IY QR+SDL VTTS+GPLSFVGEW+ EW GASK DYQRF
Sbjct: 406 SLFSDMFNNMNVQQNIDFIYNQRASDLSAVTTSNGPLSFVGEWTAEWAKSGASKEDYQRF 465
Query: 418 AEAQLDVYGRATFGWAYWAYK 438
A+AQ+DVYGRATFGWAYWAY+
Sbjct: 466 AKAQIDVYGRATFGWAYWAYR 486
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296086866|emb|CBI33033.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 308/469 (65%), Positives = 371/469 (79%), Gaps = 18/469 (3%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P +F GI N DLLDGTQVQ +STKL+KYL AENG T ++AN +S S W+TFRLWR
Sbjct: 50 MKPELFAGIPNQDLLDGTQVQFMSTKLQKYLAAENGGGTDVVANR--TSPSGWETFRLWR 107
Query: 61 INETFYNFRLSNKQFIGLENQG--NKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGY 118
IN++ +N R+ NKQF GLENQG NK+V+V + E FQI RKN + +RVR +ASNG
Sbjct: 108 INKSTFNLRVFNKQFFGLENQGKGNKVVSVLNSPGNSETFQIVRKNDDQNRVRIKASNGL 167
Query: 119 FLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWK 178
FLQAK + VTADY G S W++N+PSVF M IV T+ GEYQITNGYGPD+A ++M+DHW
Sbjct: 168 FLQAKPGL-VTADYGG-SGWDDNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWN 225
Query: 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
+YIT EDF+F+S NGLNAVRIPVGWWIA DP PPKPFVGGSL+ALDNAF WAQ GMK+I
Sbjct: 226 AYITNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKII 285
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298
VDLHA++ SQNG+ HSG+RDGFQEW DS+IQ+TVA+IDFLA+RYA++PSL +IELMNEP
Sbjct: 286 VDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAARYANNPSLASIELMNEPL 345
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-GEWSELLSFASNLSRVVIDVHFY 357
AP + L+ LK YYKAGYD VRKY+S+AYVILSNRLG + ELL FA L+RVVIDVH+Y
Sbjct: 346 APGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYY 405
Query: 358 NLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRF 417
+LF D FN M+VQQNID+IY QR+SDL VTTS+GPLSFVGEW+ EW GASK+DYQRF
Sbjct: 406 SLFSDMFNNMNVQQNIDFIYSQRASDLSAVTTSNGPLSFVGEWTAEWAKSGASKKDYQRF 465
Query: 418 AEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHI 466
A+AQ+DVY RATFGWAYWAY+ A++ SL W + HI
Sbjct: 466 AKAQIDVYRRATFGWAYWAYRCAQNHW-----------SLKWMIENGHI 503
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224093776|ref|XP_002309987.1| predicted protein [Populus trichocarpa] gi|222852890|gb|EEE90437.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 302/444 (68%), Positives = 364/444 (81%), Gaps = 10/444 (2%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P+++ G+ NNDLLDG QVQ +STKL+KYL++ENG T+L+AN S S W+TFRLWR
Sbjct: 1 MKPSLYDGMPNNDLLDGAQVQFLSTKLQKYLSSENGGGTVLVANR--PSASGWETFRLWR 58
Query: 61 INETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFL 120
INET++NFR+ NKQF+GLE+QG+K+ AVS T + FQI R N + +RVR +ASNG F+
Sbjct: 59 INETYFNFRVFNKQFVGLEDQGDKVTAVSDTVGNSQTFQIIRNNDDRNRVRLQASNGQFI 118
Query: 121 QAKSEMQVTADYKGPSTWEENDPSVFNMTIVS--TMHGEYQITNGYGPDKAAKLMRDHWK 178
QA SE VTADY G S WE++DPSVF MTIV+ + GEYQ+TNGYGPD+A ++++DHW
Sbjct: 119 QASSETLVTADYVG-SGWEDSDPSVFKMTIVNIYSFRGEYQLTNGYGPDRAPQVLQDHWN 177
Query: 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
SYITEEDF+FMS+N LNAVRIPVGWWIA DP PPKPFVGGSL+ALDNAF WAQKYGMKVI
Sbjct: 178 SYITEEDFRFMSENSLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQKYGMKVI 237
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLA-SRYADHPSLVAIELMNEP 297
VDLHA++ SQNG+ HS +RDG+QEW +S+IQETVA+IDFLA SRYAD PSL AIELMNEP
Sbjct: 238 VDLHAVQASQNGNDHSATRDGYQEWGESNIQETVAVIDFLAESRYADKPSLAAIELMNEP 297
Query: 298 KAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-GEWSELLSFASNLSRVVIDVHF 356
AP + LD+L YY+AGYD VRK+S +AYVILSNRLG + ELLSFAS L RVVIDVH+
Sbjct: 298 MAPGVNLDTLIKYYQAGYDAVRKHSENAYVILSNRLGPADSKELLSFASGLKRVVIDVHY 357
Query: 357 YNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQR 416
YNLF D+FN M+ QQNIDYIY QR+S L VTT++GPL EW+ +W +GAS +DYQ
Sbjct: 358 YNLFSDSFNNMNPQQNIDYIYNQRASALTTVTTTNGPLR---EWTGDWAVQGASMQDYQN 414
Query: 417 FAEAQLDVYGRATFGWAYWAYKFA 440
FA+AQLDVYGRATFGWAYWAYK A
Sbjct: 415 FAKAQLDVYGRATFGWAYWAYKCA 438
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147795863|emb|CAN74231.1| hypothetical protein VITISV_000586 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 303/469 (64%), Positives = 362/469 (77%), Gaps = 24/469 (5%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P +F GI N DLLDGTQVQ +STKL+KYL AENG T ++AN +S S W+TFRLWR
Sbjct: 158 MKPELFAGIPNQDLLDGTQVQFMSTKLQKYLAAENGGGTDVVANR--TSPSGWETFRLWR 215
Query: 61 INETFYNFRLSNKQFIGLENQG--NKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGY 118
IN++ +N R+ NKQF GLENQG NK+V+V + E FQI RKN + +RVR +ASNG
Sbjct: 216 INKSTFNLRVFNKQFFGLENQGKGNKVVSVLNSPGNSETFQIVRKNDDQNRVRIKASNGL 275
Query: 119 FLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWK 178
FLQAK + VTADY G S W+ N+PSVF M IV T+ GEYQITNGYGPD+A ++M+DHW
Sbjct: 276 FLQAKPGL-VTADYGG-SGWDXNNPSVFQMKIVRTLQGEYQITNGYGPDRAPQVMQDHWN 333
Query: 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
+YI EDF+F+S NGLNAVRIPVGWWIA DP PPKPFVGGSL+ALDNAF WAQ GMK+I
Sbjct: 334 AYIXNEDFRFLSSNGLNAVRIPVGWWIASDPTPPKPFVGGSLKALDNAFTWAQNNGMKII 393
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298
VDLHA++ SQNG+ HSG+RDGFQEW DS+IQ+TVA+IDFLA+ SL IELMNEP
Sbjct: 394 VDLHAVQGSQNGNDHSGTRDGFQEWGDSNIQDTVAVIDFLAA------SLAXIELMNEPL 447
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-GEWSELLSFASNLSRVVIDVHFY 357
AP + L+ LK YYKAGYD VRKY+S+AYVILSNRLG + ELL FA L+RVVIDVH+Y
Sbjct: 448 APGVTLNDLKKYYKAGYDAVRKYTSNAYVILSNRLGPADSKELLDFARGLNRVVIDVHYY 507
Query: 358 NLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRF 417
+LF D FN M+VQQNID+IY QR+SDL VTTS+GPLSFVGEW+ EW GASK+DYQRF
Sbjct: 508 SLFSDMFNNMNVQQNIDFIYSQRASDLSAVTTSNGPLSFVGEWTAEWAKSGASKKDYQRF 567
Query: 418 AEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHI 466
A+AQ+DVY RATFGWAYWAY+ A++ SL W + HI
Sbjct: 568 AKAQIDVYRRATFGWAYWAYRCAQNHW-----------SLKWMIENGHI 605
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224081170|ref|XP_002306319.1| predicted protein [Populus trichocarpa] gi|222855768|gb|EEE93315.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 599 bits (1544), Expect = e-168, Method: Compositional matrix adjust.
Identities = 297/456 (65%), Positives = 359/456 (78%), Gaps = 20/456 (4%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P+++ G+ NNDLLDGTQV+ ST+L+KYL +ENG TIL+AN S S W+TFRLWR
Sbjct: 15 MDPSLYDGMPNNDLLDGTQVRFFSTRLQKYLCSENGGGTILVANR--PSASDWETFRLWR 72
Query: 61 INETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFL 120
INET++NFR+ NKQF+GLE+QGNK+ A S T E FQI RKN + VR +ASNG FL
Sbjct: 73 INETYFNFRVFNKQFVGLEDQGNKVTAFSDTAGNRETFQIIRKNDDRSIVRLQASNGQFL 132
Query: 121 QAKSEMQVTADYKGPSTWEENDPSVFNMTIVS--TMHGEYQITNGYGPDKAAKLMRDHWK 178
QA SE VTADY G S W++ DPSVF MTIV+ + GEYQ+TNGYG D+A ++++DHW
Sbjct: 133 QAISETLVTADYVG-SGWDDGDPSVFKMTIVNPNAIRGEYQLTNGYGTDRAPQVLQDHWN 191
Query: 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQ------- 231
SYIT+EDF+FMS NGLNAVRIPVGWWIA DP PPKPFV GSL+ALDNAF WAQ
Sbjct: 192 SYITDEDFRFMSANGLNAVRIPVGWWIACDP-PPKPFVSGSLKALDNAFTWAQCYKYSDD 250
Query: 232 ------KYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADH 285
+YGMKVIVDLHA++ SQNG+ HSG+RDG+QEW DS+IQ+TVA+IDFLA RYA++
Sbjct: 251 GLRIYMEYGMKVIVDLHAIQGSQNGNGHSGTRDGYQEWGDSNIQDTVAVIDFLAERYANN 310
Query: 286 PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-GEWSELLSFA 344
SL AIELMNEP AP + LD+LK YY+AGYD VRKY+ +AYVILSNRLG + ELLSFA
Sbjct: 311 TSLAAIELMNEPMAPGISLDTLKKYYQAGYDAVRKYTQNAYVILSNRLGNADAKELLSFA 370
Query: 345 SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEW 404
S+L V IDVH+YNLF D+F+ M+ QQNID+I+ QRSSDL VTT++GP FVGEW+ EW
Sbjct: 371 SSLHCVAIDVHYYNLFSDSFSNMNAQQNIDFIHNQRSSDLDTVTTANGPSIFVGEWTGEW 430
Query: 405 EAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440
E GAS DYQ FA+AQ++VYGRA FGWAYWAYK A
Sbjct: 431 EVNGASMEDYQNFAKAQIEVYGRAQFGWAYWAYKCA 466
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455945|ref|XP_003598253.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|355487301|gb|AES68504.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 274/440 (62%), Positives = 347/440 (78%), Gaps = 8/440 (1%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P++F GI N DLLDGTQVQ STK +KYL AE+G T ++AN S S W+TF+LWR
Sbjct: 21 MKPSLFEGIVNKDLLDGTQVQFKSTKFQKYLCAEDGGGTAIVANR--GSPSGWETFKLWR 78
Query: 61 INETFYNFRLSNKQFIGLEN--QGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGY 118
+N++ +NFR+ NK+F+GL N GN +V+ S + E FQI R N +P ++R +ASNG
Sbjct: 79 VNDSSFNFRVFNKKFVGLNNIGGGNTIVSFSDSPGNRETFQIIRNNDDPLKIRIKASNGL 138
Query: 119 FLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWK 178
FLQA+SE VTA+Y+G + WEE+DPSVF MTIV T+ GEYQ+TNGYGPD+A +++R+HW
Sbjct: 139 FLQAQSETLVTANYQG-TNWEESDPSVFKMTIVRTLEGEYQLTNGYGPDRAPQVLREHWN 197
Query: 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
SYITE+DF+FMSQNGL+AVRIPVGWWIAYDP PPKPFVGGSL ALDNAF WAQ + MKVI
Sbjct: 198 SYITEDDFRFMSQNGLDAVRIPVGWWIAYDPNPPKPFVGGSLAALDNAFTWAQNHEMKVI 257
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298
VDLHA+ SQNG+ HSG+RDG+ EW DS I +TVA+IDFLA RY + PSL IELMNEP+
Sbjct: 258 VDLHAVEGSQNGNEHSGTRDGYTEWGDSYIPQTVAVIDFLAQRYGNKPSLGGIELMNEPQ 317
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYN 358
+ LDSLK YYKA YD VRKY+ AYVI+SN L G+ LLSF S ++VV+DVH+YN
Sbjct: 318 G--VNLDSLKKYYKAAYDAVRKYNPEAYVIMSNPLDGDSKALLSFVSGFNKVVLDVHYYN 375
Query: 359 LFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFA 418
+FW+ FN M+VQQNID+I +R+SDL V++++ L+F+GEW+ EW + ASK+D+Q FA
Sbjct: 376 MFWEKFNGMNVQQNIDFIRNERASDLAGVSSTNA-LTFIGEWTGEWTIQNASKQDFQNFA 434
Query: 419 EAQLDVYGRATFGWAYWAYK 438
+AQLDVY RATFGWAYW+YK
Sbjct: 435 QAQLDVYSRATFGWAYWSYK 454
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388491144|gb|AFK33638.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 276/439 (62%), Positives = 346/439 (78%), Gaps = 6/439 (1%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P++F GI N DLLDGTQVQL+STK +KYL A+NG ++AN +S+S W+TF LWR
Sbjct: 45 MKPSLFEGIVNKDLLDGTQVQLVSTKFQKYLAADNGGGAGIVANRDSAS--GWETFPLWR 102
Query: 61 INETFYNFRLSNKQFIGLENQG-NKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYF 119
+N+T++NFR+ NKQF+G+ NQG NK+VAVS + E FQI R +G+P ++R +ASNG +
Sbjct: 103 VNDTYFNFRVFNKQFMGINNQGDNKIVAVSNSPSNQETFQIIRNSGDPLKIRIKASNGLY 162
Query: 120 LQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKS 179
Q +SE VTADY ++WEE+DPSVF M IV T+ GEYQ+TNGYGPDKA +++RDHW S
Sbjct: 163 WQVRSETLVTADYGQGTSWEESDPSVFRMKIVRTLEGEYQLTNGYGPDKAPQVLRDHWNS 222
Query: 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV 239
YITE+DF FMSQNGLNAVRIPVGWWIA DP PPKPFVGGSL ALDNAF WAQ +GMKVIV
Sbjct: 223 YITEDDFTFMSQNGLNAVRIPVGWWIAQDPNPPKPFVGGSLAALDNAFTWAQIHGMKVIV 282
Query: 240 DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299
DLHA+ SQNG+ HSG+RDGF EW +S I +TV++IDFLA RY + PSL IELMNEP+
Sbjct: 283 DLHAVEGSQNGNDHSGTRDGFIEWGESYIPQTVSVIDFLAKRYGNRPSLGGIELMNEPQG 342
Query: 300 PDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNL 359
+ LDSLK YYK YD VRKY+ +AYVI+SN L + LLSF + ++VV+DVH+YNL
Sbjct: 343 --VNLDSLKKYYKEAYDAVRKYNPNAYVIMSNPLDADSKVLLSFVTGFNKVVLDVHYYNL 400
Query: 360 FWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAE 419
+ D F M+VQQNIDYI +R+SDL V++++ LSFVGEW+ E+ +GAS +DYQR+ +
Sbjct: 401 YSDKFTNMNVQQNIDYINNERASDLSGVSSTNA-LSFVGEWTDEFLVQGASMQDYQRYGQ 459
Query: 420 AQLDVYGRATFGWAYWAYK 438
AQLDVY RATFGWAYWAYK
Sbjct: 460 AQLDVYSRATFGWAYWAYK 478
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|289540917|gb|ADD09589.1| unknown [Trifolium repens] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 284/442 (64%), Positives = 344/442 (77%), Gaps = 9/442 (2%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P++F GIKNNDLLDGT VQ +S KL+KYL AENG TI++AN + S W+TFRLWR
Sbjct: 49 MQPSLFDGIKNNDLLDGTHVQFMSMKLQKYLCAENGGGTIVVANR--TKASGWETFRLWR 106
Query: 61 INETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFL 120
+NET +N R+SNKQFIGLE++ NKLVA + E F+I R N +P+RV+ R NG FL
Sbjct: 107 VNETSFNLRVSNKQFIGLEDE-NKLVADINSPGDKETFEIVRNNDDPNRVKIRTPNGLFL 165
Query: 121 QA-KSEMQVTAD-YKGPSTWEENDPSVFNMTIVST--MHGEYQITNGYGPDKAAKLMRDH 176
QA SE V A+ S+WE++DPSVF MT++++ + GEYQITNGYGPDKA K+MRDH
Sbjct: 166 QAISSESIVNAETVYEESSWEDSDPSVFKMTVLTSTILKGEYQITNGYGPDKAPKIMRDH 225
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W +YITE+DFKFMS+NGLNAVRIPVGWWI DP PPKPFVGGSL+ LDNAF WAQKYGMK
Sbjct: 226 WNTYITEDDFKFMSENGLNAVRIPVGWWITKDPTPPKPFVGGSLKILDNAFTWAQKYGMK 285
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
VIVDLHA SQNG HS +RDG++EW DS I +TVA IDFLA RYA+ PSL+AI+LMNE
Sbjct: 286 VIVDLHAAPASQNGRVHSATRDGYREWGDSYISDTVATIDFLAERYAESPSLIAIQLMNE 345
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHF 356
P D L SLK YY+AGY+ VRK++SSAYVI+SN L + LL FA RVVIDVH+
Sbjct: 346 PYGVD--LGSLKRYYQAGYEAVRKHTSSAYVIMSNPLDRDSKVLLQFARAFDRVVIDVHY 403
Query: 357 YNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQR 416
YNLFWD F+ M+V+QNIDYI R+S+L ++T+S+GPL VGEWS EW + ASK DYQ+
Sbjct: 404 YNLFWDKFSNMNVKQNIDYIRYNRASELSSLTSSNGPLIIVGEWSGEWMVKSASKEDYQK 463
Query: 417 FAEAQLDVYGRATFGWAYWAYK 438
F +AQ+DVY RATFGWAYWAYK
Sbjct: 464 FMKAQVDVYSRATFGWAYWAYK 485
|
Source: Trifolium repens Species: Trifolium repens Genus: Trifolium Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357455947|ref|XP_003598254.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] gi|355487302|gb|AES68505.1| Glucan 1,3-beta-glucosidase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 276/439 (62%), Positives = 346/439 (78%), Gaps = 6/439 (1%)
Query: 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR 60
M+P++F GI N DLLDGTQVQL+STK +KYL A+NG ++AN +S+S W+TF LWR
Sbjct: 45 MKPSLFEGIVNKDLLDGTQVQLMSTKFQKYLAADNGGGAGIVANRDSAS--GWETFPLWR 102
Query: 61 INETFYNFRLSNKQFIGLENQG-NKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYF 119
+N+T++NFR+ NKQF+G+ NQG NK+VAVS + E FQI R +G+P ++R +ASNG +
Sbjct: 103 VNDTYFNFRVFNKQFMGINNQGDNKIVAVSNSPSNQETFQIIRNSGDPLKIRIKASNGLY 162
Query: 120 LQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKS 179
Q +SE VTADY ++WEE+DPSVF M IV T+ GEYQ+TNGYGPDKA +++RDHW S
Sbjct: 163 WQVRSETLVTADYGQGTSWEESDPSVFRMKIVRTLEGEYQLTNGYGPDKAPQVLRDHWNS 222
Query: 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV 239
YITE+DF FMSQNGLNAVRIPVGWWIA DP PPKPFVGGSL ALDNAF WAQ +GMKVIV
Sbjct: 223 YITEDDFTFMSQNGLNAVRIPVGWWIAQDPNPPKPFVGGSLAALDNAFTWAQIHGMKVIV 282
Query: 240 DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299
DLHA+ SQNG+ HSG+RDGF EW +S I +TV++IDFLA RY + PSL IELMNEP+
Sbjct: 283 DLHAVEGSQNGNDHSGTRDGFIEWGESYIPQTVSVIDFLAKRYGNRPSLGGIELMNEPQG 342
Query: 300 PDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNL 359
+ LDSLK YYK YD VRKY+ +AYVI+SN L + LLSF + ++VV+DVH+YNL
Sbjct: 343 --VNLDSLKKYYKEAYDAVRKYNPNAYVIMSNPLDADSKVLLSFVTGFNKVVLDVHYYNL 400
Query: 360 FWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAE 419
+ D F M+VQQNIDYI +R+SDL V++++ LSFVGEW+ E+ +GAS +DYQR+ +
Sbjct: 401 YSDKFTNMNVQQNIDYINNERASDLSGVSSTNA-LSFVGEWTDEFLVQGASMQDYQRYGQ 459
Query: 420 AQLDVYGRATFGWAYWAYK 438
AQLDVY RATFGWAYWAYK
Sbjct: 460 AQLDVYSRATFGWAYWAYK 478
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 535 | ||||||
| ASPGD|ASPL0000016384 | 405 | exgC [Emericella nidulans (tax | 0.463 | 0.612 | 0.371 | 1.8e-42 | |
| CGD|CAL0006153 | 438 | XOG1 [Candida albicans (taxid: | 0.379 | 0.463 | 0.358 | 2.5e-41 | |
| UNIPROTKB|P29717 | 438 | XOG1 "Glucan 1,3-beta-glucosid | 0.379 | 0.463 | 0.358 | 2.5e-41 | |
| POMBASE|SPBC1105.05 | 407 | exg1 "glucan 1,6-beta-glucosid | 0.428 | 0.562 | 0.320 | 7.6e-34 | |
| SGD|S000005716 | 445 | SPR1 "Sporulation-specific exo | 0.429 | 0.516 | 0.319 | 2.3e-33 | |
| SGD|S000004291 | 448 | EXG1 "Major exo-1,3-beta-gluca | 0.403 | 0.482 | 0.32 | 5.6e-30 | |
| CGD|CAL0006050 | 479 | EXG2 [Candida albicans (taxid: | 0.327 | 0.365 | 0.329 | 1.2e-26 | |
| UNIPROTKB|Q5AIA1 | 479 | EXG2 "Putative uncharacterized | 0.327 | 0.365 | 0.329 | 1.2e-26 | |
| CGD|CAL0006247 | 525 | SPR1 [Candida albicans (taxid: | 0.489 | 0.499 | 0.273 | 7.1e-22 | |
| UNIPROTKB|Q59Z61 | 525 | SPR1 "Putative uncharacterized | 0.489 | 0.499 | 0.273 | 7.1e-22 |
| ASPGD|ASPL0000016384 exgC [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 98/264 (37%), Positives = 149/264 (56%)
Query: 143 PSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVG 202
PS+F+ + EY +T G ++AA + +HW ++ITEEDF +++ GLN VRIP+G
Sbjct: 46 PSLFDEAGDEAVD-EYTLTEVLGVEEAAARLSEHWNTFITEEDFALIAEAGLNYVRIPIG 104
Query: 203 WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262
+W A P +P+V G L+ LDNA WA+ + +KVIVDLH SQNG +SG R G
Sbjct: 105 YWAAA-PLDGEPYVSGQLEHLDNAVAWARAHNLKVIVDLHGAPGSQNGFDNSGRR-GPIG 162
Query: 263 WSDSD-IQETVAIIDFLASRY-ADHPSLVAIELMNEPKAPD-LKLDSLKTYYKAGYDTVR 319
W D +++T+ + LA RY AD ++ IE +NEP P + D LK YY+ VR
Sbjct: 163 WQQGDTVEQTILAFETLAQRYLADDDTVTMIEALNEPHVPGGINQDQLKDYYEETLARVR 222
Query: 320 KYSSSAYVILSNR-LGGE-WSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIY 377
K S A ++L + + E W+ ++ N V++D H Y +F N S++++ID
Sbjct: 223 KNSPEATLLLHDGFVQTEGWNGFMT-GEN---VMMDTHHYEVFEGGQNAWSIEKHIDAAC 278
Query: 378 RQRSSDLRNVTTSDGPLSFVGEWS 401
+ L+ +D P+ VGEW+
Sbjct: 279 QLGRQHLQ---AADKPV-IVGEWT 298
|
|
| CGD|CAL0006153 XOG1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 75/209 (35%), Positives = 124/209 (59%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A+++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 277 FLASRYADHPS---LVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLF 360
++ G W+ L+ A VV+D H Y +F
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVF 296
|
|
| UNIPROTKB|P29717 XOG1 "Glucan 1,3-beta-glucosidase" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 367 (134.2 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 75/209 (35%), Positives = 124/209 (59%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A+++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 89 EYHWTQTLGKEAASRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 147
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 148 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 207
Query: 277 FLASRYADHPS---LVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-- 331
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 208 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 267
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLF 360
++ G W+ L+ A VV+D H Y +F
Sbjct: 268 QVFGYWNNFLTVAEGQWNVVVDHHHYQVF 296
|
|
| POMBASE|SPBC1105.05 exg1 "glucan 1,6-beta-glucosidase Exg1" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 307 (113.1 bits), Expect = 7.6e-34, Sum P(3) = 7.6e-34
Identities = 78/243 (32%), Positives = 130/243 (53%)
Query: 165 GPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALD 224
G D+AA + H+ S+ TE DF ++ G+N +RIP+G+W A++ +P+V G LD
Sbjct: 80 GADEAASQLAAHYSSFYTESDFATIASWGVNVLRIPIGYW-AFNVVDGEPYVQGQEYWLD 138
Query: 225 NAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSD-IQETVAIIDFLASRY- 282
A WA++YG+KV +DLH + SQNG +SG + G W +D + T+ II ++A++Y
Sbjct: 139 QALTWAEQYGLKVWIDLHGVPGSQNGFENSG-KTGSIGWQQNDTVTRTLDIITYVANKYT 197
Query: 283 -ADHPSLV-AIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG--GEWS 338
+ + S+V IE +NEP L +D LK Y Y+ V SSS I+ + W
Sbjct: 198 QSQYASVVIGIETVNEPLGYGLDMDQLKQYDLDAYNIVNPLSSSVATIIHDAYVDLSIWD 257
Query: 339 ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVG 398
+ S+ + +V+DVH Y L+ + ++ ++ + + + S ++ G
Sbjct: 258 YGVVSPSSYN-LVMDVHRYQLYESDECSKTLDDHLSDV-----CSIGDSIASSPYITVTG 311
Query: 399 EWS 401
EWS
Sbjct: 312 EWS 314
|
|
| SGD|S000005716 SPR1 "Sporulation-specific exo-1,3-beta-glucanase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 325 (119.5 bits), Expect = 2.3e-33, Sum P(2) = 2.3e-33
Identities = 77/241 (31%), Positives = 124/241 (51%)
Query: 128 VTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFK 187
V Y PS +E + +N + EY G +KA + + HW ++ EEDF
Sbjct: 64 VLEPYITPSLFETFRTNPYNDDGIPV--DEYHFCEKLGYEKAKERLYSHWSTFYKEEDFA 121
Query: 188 FMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQA-LDNAFRWAQKYGMKVIVDLHALRV 246
++ G N VRIP+G+W A+ P+V + LD A WA+KYG+KV +DLH
Sbjct: 122 KIASQGFNLVRIPIGYW-AFTTLSHDPYVTAEQEYFLDRAIDWARKYGLKVWIDLHGAAG 180
Query: 247 SQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADH---PSLVAIELMNEPKAPDLK 303
SQNG +SG RD ++ D ++ T+ + ++ S+Y+ +++ IEL+NEP P +
Sbjct: 181 SQNGFDNSGLRDSYKFLEDENLSATMKALTYILSKYSTDVYLDTVIGIELLNEPLGPVID 240
Query: 304 LDSLKTYY-KAGYDTVR-KYSSSAYVILSNRLGGE--WSELLSFASNLSRVVIDVHFYNL 359
++ LK K YD +R K +S+ +++ + W L+ N V+ID H Y +
Sbjct: 241 MERLKNLLLKPAYDYLRNKINSNQIIVIHDAFQPYHYWDGFLNDEKNEYGVIIDHHHYQV 300
Query: 360 F 360
F
Sbjct: 301 F 301
|
|
| SGD|S000004291 EXG1 "Major exo-1,3-beta-glucanase of the cell wall" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 314 (115.6 bits), Expect = 5.6e-30, Sum P(2) = 5.6e-30
Identities = 72/225 (32%), Positives = 117/225 (52%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY G D A ++ HW ++ E+DF ++ G N VRIP+G+W A+ P+V
Sbjct: 90 EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYW-AFQTLDDDPYV 148
Query: 217 GGSLQA-LDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAII 275
G ++ LD A WA+ +KV VDLH SQNG +SG RD ++ DS++ T ++
Sbjct: 149 SGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTTNVL 208
Query: 276 DFLASRYADHPSL---VAIELMNEPKAPDLKLDSLKTYYKA-GYDTVRKYSSSAYVILSN 331
+++ +Y+ L + IEL+NEP P L +D +K Y A Y+ +R S VI+ +
Sbjct: 209 NYILKKYSAEEYLDTVIGIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIH 268
Query: 332 ---RLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNI 373
+ W + ++ V ID H Y +F + + S+ ++I
Sbjct: 269 DAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLERSIDEHI 313
|
|
| CGD|CAL0006050 EXG2 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 272 (100.8 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 64/194 (32%), Positives = 104/194 (53%)
Query: 143 PSVFNMTIVS--TMHG----EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNA 196
PS+FN T+ S T EY G +A K + DHW+S E DFK + + GLN
Sbjct: 59 PSLFNATLSSGETWTDLPVDEYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNM 118
Query: 197 VRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGS 256
VRIP+G+W +++ P+V G+ LD A W+ +KV++DLH +QNG +SG
Sbjct: 119 VRIPIGYW-SFEKLEGDPYVSGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGL 177
Query: 257 RD-GFQEWSDSD--IQETVAIIDFLASRY------ADHPS-LVAIELMNEPKAPDLKLDS 306
R+ G+ W + + T ++ + +Y +D+ + ++ IE++NEP P++ D
Sbjct: 178 RNLGYPGWQNKTEYVNHTYKVLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPNM--DK 235
Query: 307 LKTYYKAGYDTVRK 320
LK +Y Y+ R+
Sbjct: 236 LKEFYIESYNDGRE 249
|
|
| UNIPROTKB|Q5AIA1 EXG2 "Putative uncharacterized protein EXG2" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 272 (100.8 bits), Expect = 1.2e-26, Sum P(3) = 1.2e-26
Identities = 64/194 (32%), Positives = 104/194 (53%)
Query: 143 PSVFNMTIVS--TMHG----EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNA 196
PS+FN T+ S T EY G +A K + DHW+S E DFK + + GLN
Sbjct: 59 PSLFNATLSSGETWTDLPVDEYHFCEKLGAKEAEKRLTDHWESMYNETDFKQIKEAGLNM 118
Query: 197 VRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGS 256
VRIP+G+W +++ P+V G+ LD A W+ +KV++DLH +QNG +SG
Sbjct: 119 VRIPIGYW-SFEKLEGDPYVSGAQDYLDKAIEWSHANDLKVMIDLHGAPNTQNGFDNSGL 177
Query: 257 RD-GFQEWSDSD--IQETVAIIDFLASRY------ADHPS-LVAIELMNEPKAPDLKLDS 306
R+ G+ W + + T ++ + +Y +D+ + ++ IE++NEP P++ D
Sbjct: 178 RNLGYPGWQNKTEYVNHTYKVLQQMFQKYGTGKYASDYKNTIIGIEVLNEPLNPNM--DK 235
Query: 307 LKTYYKAGYDTVRK 320
LK +Y Y+ R+
Sbjct: 236 LKEFYIESYNDGRE 249
|
|
| CGD|CAL0006247 SPR1 [Candida albicans (taxid:5476)] | Back alignment and assigned GO terms |
|---|
Score = 281 (104.0 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 76/278 (27%), Positives = 142/278 (51%)
Query: 128 VTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGP--DKAAKLMRDHWKSYITEED 185
VT + PS +E N + N S EY +T+ D + +++HW + E D
Sbjct: 76 VTEPWITPSLYE-NAVNNHNNN-KSIPVDEYTLTSLLRDTMDNGSIYLQNHWDQFYNETD 133
Query: 186 FKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALR 245
F+ +SQ LN +RIP+G+W A++ P P++ G + LD A WA KY + + + +H L
Sbjct: 134 FQQISQLKLNLIRIPIGYW-AFELLPNDPYIQGQEKYLDIAIEWATKYNLFIQIGIHGLP 192
Query: 246 VSQNGSPHSGSRDGFQEWSDSDIQE--TVAIIDFLASRYADHPSLVAIELMNEPKAPDLK 303
SQNG +SG W ++++ T ++D++ ++Y +H ++ +I+L+NEP L
Sbjct: 193 GSQNGFDNSGLYTETPTWLENELNMNLTYRLVDYILNKYGNHTTIHSIQLVNEPLGFLLN 252
Query: 304 LDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDN 363
+ L +Y + + + + A ++L + + + S+ + ++D H Y +F
Sbjct: 253 KEKLSNFYIYCLEKIIQKNIKAKLVLHDA----FFNIESWKNFPGEFILDHHLYEVFSQW 308
Query: 364 FNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWS 401
+++QQ++ I Q S +++ G S VGE+S
Sbjct: 309 QIDLNLQQHLQSIKHQGESIVKS-----GHRSIVGEFS 341
|
|
| UNIPROTKB|Q59Z61 SPR1 "Putative uncharacterized protein SPR1" [Candida albicans SC5314 (taxid:237561)] | Back alignment and assigned GO terms |
|---|
Score = 281 (104.0 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 76/278 (27%), Positives = 142/278 (51%)
Query: 128 VTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGP--DKAAKLMRDHWKSYITEED 185
VT + PS +E N + N S EY +T+ D + +++HW + E D
Sbjct: 76 VTEPWITPSLYE-NAVNNHNNN-KSIPVDEYTLTSLLRDTMDNGSIYLQNHWDQFYNETD 133
Query: 186 FKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALR 245
F+ +SQ LN +RIP+G+W A++ P P++ G + LD A WA KY + + + +H L
Sbjct: 134 FQQISQLKLNLIRIPIGYW-AFELLPNDPYIQGQEKYLDIAIEWATKYNLFIQIGIHGLP 192
Query: 246 VSQNGSPHSGSRDGFQEWSDSDIQE--TVAIIDFLASRYADHPSLVAIELMNEPKAPDLK 303
SQNG +SG W ++++ T ++D++ ++Y +H ++ +I+L+NEP L
Sbjct: 193 GSQNGFDNSGLYTETPTWLENELNMNLTYRLVDYILNKYGNHTTIHSIQLVNEPLGFLLN 252
Query: 304 LDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDN 363
+ L +Y + + + + A ++L + + + S+ + ++D H Y +F
Sbjct: 253 KEKLSNFYIYCLEKIIQKNIKAKLVLHDA----FFNIESWKNFPGEFILDHHLYEVFSQW 308
Query: 364 FNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWS 401
+++QQ++ I Q S +++ G S VGE+S
Sbjct: 309 QIDLNLQQHLQSIKHQGESIVKS-----GHRSIVGEFS 341
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| GSVIVG00011902001 | SubName- Full=Chromosome undetermined scaffold_349, whole genome shotgun sequence; (486 aa) | ||||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 535 | |||
| COG2730 | 407 | COG2730, BglC, Endoglucanase [Carbohydrate transpo | 5e-31 | |
| pfam00150 | 269 | pfam00150, Cellulase, Cellulase (glycosyl hydrolas | 8e-19 | |
| pfam02449 | 376 | pfam02449, Glyco_hydro_42, Beta-galactosidase | 6e-08 | |
| cd00257 | 119 | cd00257, Fascin, Fascin-like domain; members inclu | 1e-04 | |
| COG2723 | 460 | COG2723, BglB, Beta-glucosidase/6-phospho-beta-glu | 7e-04 |
| >gnl|CDD|225344 COG2730, BglC, Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 5e-31
Identities = 70/329 (21%), Positives = 125/329 (37%), Gaps = 36/329 (10%)
Query: 145 VFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204
+ G G A L+ HW ++ITEEDF + G NAVRIP+G+W
Sbjct: 38 TDPKESPGQLVGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYW 97
Query: 205 I--AYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262
A D P L+ LD A WA+K G+ V++DLH NG HSG + +
Sbjct: 98 ALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNGHEHSGYTSDY-K 156
Query: 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA---PDLKLDSLKTYYKAGYDTVR 319
+ +++ T+ I F+A+R+ ++ +++ EL+NEP + Y + +
Sbjct: 157 EENENVEATIDIWKFIANRFKNYDTVIGFELINEPNGIVTSETWNGGDDEAYDVVRNAIL 216
Query: 320 KYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLF---WDNFNKMSVQQNIDY- 375
+ + + + W +++ S D Y + + Y
Sbjct: 217 SNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTANKHLYAPHVYG 276
Query: 376 --IYRQRSSD------------------LRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQ 415
+ S + + +G + +GE+ + A + +D +
Sbjct: 277 DDVLNGGSWTVGGEFDLAETDCAIWLNYVGHGARKNGYPTVIGEFGGNYNANNPNPQDER 336
Query: 416 R-----FAEAQLDVYGRATFGWAYWAYKF 439
+ + E QLDV+ T W +
Sbjct: 337 KDNVKVYLENQLDVFDT-TTYWINNPWSG 364
|
Length = 407 |
| >gnl|CDD|215751 pfam00150, Cellulase, Cellulase (glycosyl hydrolase family 5) | Back alignment and domain information |
|---|
Score = 86.3 bits (214), Expect = 8e-19
Identities = 66/276 (23%), Positives = 97/276 (35%), Gaps = 34/276 (12%)
Query: 176 HWK--SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKY 233
HW Y T+ + G N VR+PV W P L +D +A
Sbjct: 16 HWGNPYYTTKAMIDLVKDWGFNVVRLPVSWGGYVPNNPDYLIDENWLNRVDEVVDYAIDN 75
Query: 234 GMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIEL 293
GM VI+D H + G P+ D+ + +A+RY ++P V EL
Sbjct: 76 GMYVIIDWHHD--TWPGDPNGN--------IDTAKAFFKKLWTQIATRYGNNP-NVIFEL 124
Query: 294 MNEPKAPDLKL--DSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFA-----SN 346
MNEP D D +K Y + D +R + +I+ G WS+ A ++
Sbjct: 125 MNEPHGVDPATWDDDVKDYAQEAIDAIRAAGPNNLIIVG---GPSWSQNPDGAALNDPND 181
Query: 347 LSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA 406
++ VHFY F+ QR N +G F+GE+
Sbjct: 182 DDNLIYSVHFY-APSH-FSGTWFGCEDKTNLAQRLRAAANYALDNGIPVFIGEF------ 233
Query: 407 EGASKRD--YQRFAEAQLDVYGRATFGWAYWAYKFA 440
G D + AE LD W W+
Sbjct: 234 -GGGNADGPCRDEAEKWLDYLKENGISWTGWSNGNK 268
|
Length = 269 |
| >gnl|CDD|217042 pfam02449, Glyco_hydro_42, Beta-galactosidase | Back alignment and domain information |
|---|
Score = 54.6 bits (132), Expect = 6e-08
Identities = 42/167 (25%), Positives = 64/167 (38%), Gaps = 25/167 (14%)
Query: 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYG 234
+ W EED + M + G+N VR+ + W +P+ K G LD K G
Sbjct: 5 EQWPEETWEEDIRLMKEAGVNVVRLGIFAWAKLEPEEGKYDFGW----LDEIIDLLAKAG 60
Query: 235 MKVI------------VDLH--ALRVSQNGSPHS-GSRDGFQEWSDSDIQETVAIIDFLA 279
+KVI H L V +G GSR + S + I++ LA
Sbjct: 61 IKVILATPTAAPPAWLAKKHPEILPVDADGRRRGFGSRHHYCPSSPVYREYAARIVEALA 120
Query: 280 SRYADHPSLVAIELMNEPKAP------DLKLDSLKTYYKAGYDTVRK 320
RY DHP+L+ + NE + + + + K Y T+
Sbjct: 121 ERYGDHPALIGWHIDNEYGCHVSECYCETCQQAFRKWLKNRYGTIDA 167
|
This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. Length = 376 |
| >gnl|CDD|238160 cd00257, Fascin, Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 1e-04
Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 14/126 (11%)
Query: 18 TQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIG 77
QV L S +YL+AE G + + + N S +TF L N Y R + +++
Sbjct: 2 PQVVLRS-VNGRYLSAEAGGDKV---DANRDSLKGDETFTLEFDNTGKYALRSHDGKYLS 57
Query: 78 LENQGNKLVAVSATEKFPEPFQITRKNGEPH---RVRFRASNGYFLQAKSEMQVTADYKG 134
++ G V + F + E H + RA NG +L + A +
Sbjct: 58 ADSDGG--VQLEGHPNADCRFTL-----EFHGDGKWALRAENGRYLGGDGSGTLKASSET 110
Query: 135 PSTWEE 140
E
Sbjct: 111 VGPDEL 116
|
Length = 119 |
| >gnl|CDD|225343 COG2723, BglB, Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.9 bits (99), Expect = 7e-04
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 22/122 (18%)
Query: 124 SEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQ--ITNGYGPDKAAKLMRDHWKSYI 181
E D KGPS W+ +H E + +G P++A+ D + Y
Sbjct: 19 VEGAWNEDGKGPSDWDVW------------VHDEIPGRLVSGDPPEEAS----DFYHRY- 61
Query: 182 TEEDFKFMSQNGLNAVRIPVGW-WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD 240
+ED + GLNA R + W I + + G L+ D F + G++ V
Sbjct: 62 -KEDIALAKEMGLNAFRTSIEWSRIFPNGDGGEVNEKG-LRFYDRLFDELKARGIEPFVT 119
Query: 241 LH 242
L+
Sbjct: 120 LY 121
|
Length = 460 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 535 | |||
| PF00150 | 281 | Cellulase: Cellulase (glycosyl hydrolase family 5) | 100.0 | |
| COG2730 | 407 | BglC Endoglucanase [Carbohydrate transport and met | 99.92 | |
| cd00257 | 119 | Fascin Fascin-like domain; members include actin-b | 99.73 | |
| TIGR03356 | 427 | BGL beta-galactosidase. | 99.68 | |
| COG2723 | 460 | BglB Beta-glucosidase/6-phospho-beta-glucosidase/b | 99.68 | |
| PRK13511 | 469 | 6-phospho-beta-galactosidase; Provisional | 99.58 | |
| PLN02849 | 503 | beta-glucosidase | 99.58 | |
| TIGR01233 | 467 | lacG 6-phospho-beta-galactosidase. This enzyme is | 99.58 | |
| PLN02814 | 504 | beta-glucosidase | 99.57 | |
| PLN02998 | 497 | beta-glucosidase | 99.57 | |
| PRK15014 | 477 | 6-phospho-beta-glucosidase BglA; Provisional | 99.56 | |
| PF02449 | 374 | Glyco_hydro_42: Beta-galactosidase; InterPro: IPR0 | 99.55 | |
| PRK09589 | 476 | celA 6-phospho-beta-glucosidase; Reviewed | 99.54 | |
| PRK09852 | 474 | cryptic 6-phospho-beta-glucosidase; Provisional | 99.54 | |
| PRK09593 | 478 | arb 6-phospho-beta-glucosidase; Reviewed | 99.54 | |
| PF00232 | 455 | Glyco_hydro_1: Glycosyl hydrolase family 1; InterP | 99.48 | |
| PRK10150 | 604 | beta-D-glucuronidase; Provisional | 99.46 | |
| PF07745 | 332 | Glyco_hydro_53: Glycosyl hydrolase family 53; Inte | 99.45 | |
| PF06268 | 111 | Fascin: Fascin domain; InterPro: IPR022768 This fa | 99.44 | |
| COG1874 | 673 | LacA Beta-galactosidase [Carbohydrate transport an | 99.38 | |
| COG3934 | 587 | Endo-beta-mannanase [Carbohydrate transport and me | 99.36 | |
| KOG0626 | 524 | consensus Beta-glucosidase, lactase phlorizinhydro | 99.36 | |
| PF02836 | 298 | Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM | 99.26 | |
| cd00257 | 119 | Fascin Fascin-like domain; members include actin-b | 99.09 | |
| PRK10340 | 1021 | ebgA cryptic beta-D-galactosidase subunit alpha; R | 98.98 | |
| COG3867 | 403 | Arabinogalactan endo-1,4-beta-galactosidase [Carbo | 98.96 | |
| PRK09525 | 1027 | lacZ beta-D-galactosidase; Reviewed | 98.95 | |
| smart00633 | 254 | Glyco_10 Glycosyl hydrolase family 10. | 98.95 | |
| PF06268 | 111 | Fascin: Fascin domain; InterPro: IPR022768 This fa | 98.88 | |
| PF03198 | 314 | Glyco_hydro_72: Glucanosyltransferase; InterPro: I | 98.69 | |
| PF01229 | 486 | Glyco_hydro_39: Glycosyl hydrolases family 39; Int | 98.67 | |
| PF12876 | 88 | Cellulase-like: Sugar-binding cellulase-like; Inte | 98.64 | |
| PF01301 | 319 | Glyco_hydro_35: Glycosyl hydrolases family 35; Int | 98.63 | |
| PF06229 | 191 | FRG1: FRG1-like family; InterPro: IPR010414 This e | 98.62 | |
| PF06229 | 191 | FRG1: FRG1-like family; InterPro: IPR010414 This e | 98.53 | |
| PF13204 | 289 | DUF4038: Protein of unknown function (DUF4038); PD | 98.47 | |
| PF14488 | 166 | DUF4434: Domain of unknown function (DUF4434) | 98.43 | |
| PLN03059 | 840 | beta-galactosidase; Provisional | 98.2 | |
| PF00331 | 320 | Glyco_hydro_10: Glycosyl hydrolase family 10; Inte | 98.05 | |
| COG3250 | 808 | LacZ Beta-galactosidase/beta-glucuronidase [Carboh | 98.0 | |
| COG3693 | 345 | XynA Beta-1,4-xylanase [Carbohydrate transport and | 97.73 | |
| COG5309 | 305 | Exo-beta-1,3-glucanase [Carbohydrate transport and | 97.61 | |
| PF04601 | 142 | DUF569: Protein of unknown function (DUF569); Inte | 97.46 | |
| PF14587 | 384 | Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; P | 97.37 | |
| PRK13188 | 464 | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetyl | 97.03 | |
| TIGR02103 | 898 | pullul_strch alpha-1,6-glucosidases, pullulanase-t | 97.0 | |
| PF02055 | 496 | Glyco_hydro_30: O-Glycosyl hydrolase family 30; In | 96.9 | |
| PF11790 | 239 | Glyco_hydro_cc: Glycosyl hydrolase catalytic core; | 96.89 | |
| PRK00006 | 147 | fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Review | 96.89 | |
| PF13200 | 316 | DUF4015: Putative glycosyl hydrolase domain | 96.68 | |
| KOG0496 | 649 | consensus Beta-galactosidase [Carbohydrate transpo | 96.65 | |
| PF05089 | 333 | NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-b | 96.57 | |
| KOG2233 | 666 | consensus Alpha-N-acetylglucosaminidase [Intracell | 96.49 | |
| KOG3962 | 246 | consensus Predicted actin-bundling protein [Cytosk | 96.19 | |
| PLN02161 | 531 | beta-amylase | 96.16 | |
| TIGR01515 | 613 | branching_enzym alpha-1,4-glucan:alpha-1,4-glucan | 96.15 | |
| PLN02801 | 517 | beta-amylase | 96.09 | |
| PLN02877 | 970 | alpha-amylase/limit dextrinase | 96.08 | |
| PLN00197 | 573 | beta-amylase; Provisional | 96.03 | |
| PRK12313 | 633 | glycogen branching enzyme; Provisional | 96.01 | |
| COG5520 | 433 | O-Glycosyl hydrolase [Cell envelope biogenesis, ou | 95.98 | |
| PLN02803 | 548 | beta-amylase | 95.87 | |
| PLN02705 | 681 | beta-amylase | 95.83 | |
| KOG2230 | 867 | consensus Predicted beta-mannosidase [Carbohydrate | 95.82 | |
| PLN02447 | 758 | 1,4-alpha-glucan-branching enzyme | 95.8 | |
| PLN02905 | 702 | beta-amylase | 95.64 | |
| PRK05402 | 726 | glycogen branching enzyme; Provisional | 95.51 | |
| COG0296 | 628 | GlgB 1,4-alpha-glucan branching enzyme [Carbohydra | 95.49 | |
| TIGR02402 | 542 | trehalose_TreZ malto-oligosyltrehalose trehalohydr | 95.48 | |
| PLN02960 | 897 | alpha-amylase | 95.41 | |
| PF01373 | 402 | Glyco_hydro_14: Glycosyl hydrolase family 14; Inte | 95.39 | |
| smart00642 | 166 | Aamy Alpha-amylase domain. | 95.29 | |
| TIGR02104 | 605 | pulA_typeI pullulanase, type I. Pullulan is an unu | 95.06 | |
| PRK12568 | 730 | glycogen branching enzyme; Provisional | 94.95 | |
| PRK10785 | 598 | maltodextrin glucosidase; Provisional | 94.74 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 94.73 | |
| PF03662 | 319 | Glyco_hydro_79n: Glycosyl hydrolase family 79, N-t | 94.59 | |
| PRK14705 | 1224 | glycogen branching enzyme; Provisional | 94.1 | |
| COG1523 | 697 | PulA Type II secretory pathway, pullulanase PulA a | 94.02 | |
| COG3623 | 287 | SgaU Putative L-xylulose-5-phosphate 3-epimerase [ | 93.89 | |
| PF00128 | 316 | Alpha-amylase: Alpha amylase, catalytic domain; In | 93.78 | |
| TIGR02102 | 1111 | pullulan_Gpos pullulanase, extracellular, Gram-pos | 93.71 | |
| PRK14706 | 639 | glycogen branching enzyme; Provisional | 93.48 | |
| PF14871 | 132 | GHL6: Hypothetical glycosyl hydrolase 6 | 93.38 | |
| PF02638 | 311 | DUF187: Glycosyl hydrolase like GH101; InterPro: I | 93.36 | |
| TIGR02100 | 688 | glgX_debranch glycogen debranching enzyme GlgX. Th | 93.24 | |
| PRK03705 | 658 | glycogen debranching enzyme; Provisional | 93.04 | |
| COG3534 | 501 | AbfA Alpha-L-arabinofuranosidase [Carbohydrate tra | 91.98 | |
| PF01120 | 346 | Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR00 | 91.87 | |
| PRK09441 | 479 | cytoplasmic alpha-amylase; Reviewed | 90.1 | |
| PRK07379 | 400 | coproporphyrinogen III oxidase; Provisional | 89.56 | |
| COG0635 | 416 | HemN Coproporphyrinogen III oxidase and related Fe | 89.21 | |
| PLN00196 | 428 | alpha-amylase; Provisional | 89.08 | |
| TIGR02403 | 543 | trehalose_treC alpha,alpha-phosphotrehalase. Treha | 88.58 | |
| cd06565 | 301 | GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) | 88.45 | |
| PRK05799 | 374 | coproporphyrinogen III oxidase; Provisional | 88.34 | |
| cd02742 | 303 | GH20_hexosaminidase Beta-N-acetylhexosaminidases o | 88.32 | |
| TIGR01212 | 302 | radical SAM protein, TIGR01212 family. This unchar | 88.23 | |
| PRK05904 | 353 | coproporphyrinogen III oxidase; Provisional | 88.2 | |
| PLN02361 | 401 | alpha-amylase | 88.1 | |
| PRK06294 | 370 | coproporphyrinogen III oxidase; Provisional | 87.94 | |
| TIGR00539 | 360 | hemN_rel putative oxygen-independent coproporphyri | 87.92 | |
| PRK09505 | 683 | malS alpha-amylase; Reviewed | 87.58 | |
| PRK08208 | 430 | coproporphyrinogen III oxidase; Validated | 87.39 | |
| PRK05660 | 378 | HemN family oxidoreductase; Provisional | 87.26 | |
| PRK10933 | 551 | trehalose-6-phosphate hydrolase; Provisional | 87.18 | |
| PF07468 | 153 | Agglutinin: Agglutinin; InterPro: IPR008998 Agglut | 87.08 | |
| PRK14510 | 1221 | putative bifunctional 4-alpha-glucanotransferase/g | 86.64 | |
| cd06564 | 326 | GH20_DspB_LnbB-like Glycosyl hydrolase family 20 ( | 86.63 | |
| TIGR02456 | 539 | treS_nterm trehalose synthase. Trehalose synthase | 86.62 | |
| PRK09057 | 380 | coproporphyrinogen III oxidase; Provisional | 86.4 | |
| PRK13347 | 453 | coproporphyrinogen III oxidase; Provisional | 85.95 | |
| PRK08599 | 377 | coproporphyrinogen III oxidase; Provisional | 85.42 | |
| KOG0470 | 757 | consensus 1,4-alpha-glucan branching enzyme/starch | 85.2 | |
| PF00167 | 122 | FGF: Fibroblast growth factor; InterPro: IPR002348 | 85.02 | |
| PRK09058 | 449 | coproporphyrinogen III oxidase; Provisional | 84.33 | |
| PF14200 | 105 | RicinB_lectin_2: Ricin-type beta-trefoil lectin do | 84.17 | |
| PRK05628 | 375 | coproporphyrinogen III oxidase; Validated | 83.79 | |
| PLN03244 | 872 | alpha-amylase; Provisional | 83.66 | |
| PRK06582 | 390 | coproporphyrinogen III oxidase; Provisional | 83.59 | |
| PRK08446 | 350 | coproporphyrinogen III oxidase; Provisional | 83.35 | |
| PRK08207 | 488 | coproporphyrinogen III oxidase; Provisional | 82.62 | |
| COG3589 | 360 | Uncharacterized conserved protein [Function unknow | 82.31 | |
| COG3664 | 428 | XynB Beta-xylosidase [Carbohydrate transport and m | 81.93 | |
| PLN02784 | 894 | alpha-amylase | 81.49 | |
| PRK09249 | 453 | coproporphyrinogen III oxidase; Provisional | 81.23 | |
| COG0764 | 147 | FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl ca | 80.38 | |
| PF04601 | 142 | DUF569: Protein of unknown function (DUF569); Inte | 80.3 |
| >PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-32 Score=270.70 Aligned_cols=252 Identities=27% Similarity=0.402 Sum_probs=178.8
Q ss_pred hhCc-cchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC
Q 046395 176 HWKS-YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS 254 (535)
Q Consensus 176 hw~~-~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s 254 (535)
||.+ ++++++|+.||++|+|+|||||.|....++.++..+.+..++.||++|++|.++||+||||+|..|+...+
T Consensus 16 ~w~~~~~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~h~~~~w~~~---- 91 (281)
T PF00150_consen 16 HWYNPSITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILDLHNAPGWANG---- 91 (281)
T ss_dssp TTSGGGSHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEEEEESTTCSSS----
T ss_pred ccCCCCCHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEEeccCcccccc----
Confidence 3543 37899999999999999999999866665666555778899999999999999999999999987542111
Q ss_pred CCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC-------hHHHHHHHHHHHHHHHhcCCCcE
Q 046395 255 GSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK-------LDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 255 g~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~-------~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
+..... ....+.+.++|+.|++||+++|.|++|||+|||...... ...+.+++++++++||+++|+++
T Consensus 92 ----~~~~~~~~~~~~~~~~~~~~la~~y~~~~~v~~~el~NEP~~~~~~~~w~~~~~~~~~~~~~~~~~~Ir~~~~~~~ 167 (281)
T PF00150_consen 92 ----GDGYGNNDTAQAWFKSFWRALAKRYKDNPPVVGWELWNEPNGGNDDANWNAQNPADWQDWYQRAIDAIRAADPNHL 167 (281)
T ss_dssp ----TSTTTTHHHHHHHHHHHHHHHHHHHTTTTTTEEEESSSSGCSTTSTTTTSHHHTHHHHHHHHHHHHHHHHTTSSSE
T ss_pred ----ccccccchhhHHHHHhhhhhhccccCCCCcEEEEEecCCccccCCccccccccchhhhhHHHHHHHHHHhcCCcce
Confidence 111111 356677889999999999999999999999999975322 27899999999999999999999
Q ss_pred EEEcC-CCCCChhh-hhccc-CCCCcEEEEEeecCcCCCcccCC-ChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCC
Q 046395 327 VILSN-RLGGEWSE-LLSFA-SNLSRVVIDVHFYNLFWDNFNKM-SVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSC 402 (535)
Q Consensus 327 ii~~~-~~g~~~~~-~~~~~-~~~~n~v~d~H~Y~~~~~~~~~~-~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~ 402 (535)
|++++ .|+.+... ....+ ....++++++|.|.++....... ........+.......+.... ..+.|++|||||.
T Consensus 168 i~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~pv~~gE~G~ 246 (281)
T PF00150_consen 168 IIVGGGGWGADPDGAAADNPNDADNNDVYSFHFYDPYDFSDQWNPGNWGDASALESSFRAALNWAK-KNGKPVVVGEFGW 246 (281)
T ss_dssp EEEEEHHHHTBHHHHHHHSTTTTTTSEEEEEEEETTTCHHTTTSTCSHHHHHHHHHHHHHHHHHHH-HTTSEEEEEEEES
T ss_pred eecCCCccccccchhhhcCcccccCceeEEeeEeCCCCcCCccccccchhhhHHHHHHHHHHHHHH-HcCCeEEEeCcCC
Confidence 99876 34444333 22332 24789999999999754211110 111222233333333333343 3455799999998
Q ss_pred CcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 403 EWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
...... ...++..+.++.+++.++||++|+|+.+
T Consensus 247 ~~~~~~----~~~~~~~~~~~~~~~~~~g~~~W~~~~~ 280 (281)
T PF00150_consen 247 SNNDGN----GSTDYADAWLDYLEQNGIGWIYWSWKPN 280 (281)
T ss_dssp STTTSC----HHHHHHHHHHHHHHHTTCEEEECEESSS
T ss_pred cCCCCC----cCHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 632111 2334444457888889999999999975
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A .... |
| >COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.2e-24 Score=230.29 Aligned_cols=283 Identities=25% Similarity=0.445 Sum_probs=188.4
Q ss_pred cccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCC-CCCCcc--chHHHHHHHHHHHH
Q 046395 155 HGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKP-PKPFVG--GSLQALDNAFRWAQ 231 (535)
Q Consensus 155 ~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~-~~~~~~--~~l~~ld~~i~~a~ 231 (535)
.++...+..+|...+...++.||.++++++++..||++|||+||||++||.+ .+.. ..|+.. ..+..|+++|++|.
T Consensus 48 ~~~~~~g~~lg~~~~~~~~~~~w~~~~~~~~~~~ik~~G~n~VRiPi~~~~~-~~~~~~~p~~~~~~~~~~ld~~I~~a~ 126 (407)
T COG2730 48 VGVSWFGLNLGNHLAQGLLESHWGNFITEEDFDQIKSAGFNAVRIPIGYWAL-QATDGDNPYLIGLTQLKILDEAINWAK 126 (407)
T ss_pred ecccccceecCchhhcccchhccchhhhhhHHHHHHHcCCcEEEcccchhhh-hccCCCCCCeecchHHHHHHHHHHHHH
Confidence 3455667777877888899999999999999999999999999999999986 3322 233433 56779999999999
Q ss_pred HcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHH
Q 046395 232 KYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYY 311 (535)
Q Consensus 232 ~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~ 311 (535)
++||+|+||+|++|+++++.++++....+.. ..++.+++.+.|++|+.||++.+.|++++++|||+. -...+.|....
T Consensus 127 ~~gi~V~iD~H~~~~~~~~~~~s~~~~~~~~-~~~~~~~~~~~w~~ia~~f~~~~~VIg~~~~NEP~~-~~~~~~w~~~~ 204 (407)
T COG2730 127 KLGIYVLIDLHGYPGGNNGHEHSGYTSDYKE-ENENVEATIDIWKFIANRFKNYDTVIGFELINEPNG-IVTSETWNGGD 204 (407)
T ss_pred hcCeeEEEEecccCCCCCCcCcccccccccc-cchhHHHHHHHHHHHHHhccCCCceeeeeeecCCcc-cCCccccccch
Confidence 9999999999999999999999886555443 567889999999999999999999999999999995 11122333333
Q ss_pred HHHHHHHH-hcCCCc---EEEEcCC-CCC-----------Chh----hhhccc--CC---CCcEEEEEeecCcCC---Cc
Q 046395 312 KAGYDTVR-KYSSSA---YVILSNR-LGG-----------EWS----ELLSFA--SN---LSRVVIDVHFYNLFW---DN 363 (535)
Q Consensus 312 ~~~~~aIR-~~~p~~---~ii~~~~-~g~-----------~~~----~~~~~~--~~---~~n~v~d~H~Y~~~~---~~ 363 (535)
.++++.|| ++...+ +|.+++. ++. .+. .....+ .. ....+++.|.|.... +.
T Consensus 205 ~~A~~~v~~~i~~~~~~~~I~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~ 284 (407)
T COG2730 205 DEAYDVVRNAILSNAPHWLIRVGGQGLNGWRVIMAHTYGSSDGGNDNGVYIVPVDDPGLTANKHLYAPHVYGDDVLNGGS 284 (407)
T ss_pred HHHHHHHHhhhhhcCceEEEEECcccccCCeeeccCCCccccccccCCceeeeccchhhhccceeccceeecchhhcCCC
Confidence 55666663 444443 4444432 111 000 000001 12 234456666664321 11
Q ss_pred ccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcC-C----CCCCHHHHHHHHHHHHHHHhhCCcceEEEeee
Q 046395 364 FNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWE-A----EGASKRDYQRFAEAQLDVYGRATFGWAYWAYK 438 (535)
Q Consensus 364 ~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~-~----~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k 438 (535)
+............+..+...+....+..+.++++||||...+ . .....+..+.+++.+.+++.. ..+|.+|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ge~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~W~~~~~~ 363 (407)
T COG2730 285 WTVGGEFDLAETDCAIWLNYVGHGARKNGYPTVIGEFGGNYNANNPNPQDERKDNVKVYLENQLDVFDT-TTYWINNPWS 363 (407)
T ss_pred CCccCCcccccccceeeecceeecccccceeeeeccccCccccCCCCccchhhHHHHHHhhhhhhhccc-eeEEEeeccc
Confidence 110000111111111122223333335677799999998774 2 123456667888999999986 7889999988
Q ss_pred eCC
Q 046395 439 FAE 441 (535)
Q Consensus 439 ~~~ 441 (535)
...
T Consensus 364 ~~~ 366 (407)
T COG2730 364 GGN 366 (407)
T ss_pred CCC
Confidence 854
|
|
| >cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Probab=99.73 E-value=6.6e-17 Score=142.10 Aligned_cols=108 Identities=23% Similarity=0.267 Sum_probs=96.6
Q ss_pred ceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCCc
Q 046395 18 TQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEP 97 (535)
Q Consensus 18 ~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e~ 97 (535)
-||+|||. +||||||+.+| ..|.|||..+ ++||+|+|...+++++.||+.||+||+++. +|.|.|++. |+.+|+
T Consensus 2 p~v~Lrs~-~gkyl~~~~~g-~~v~a~~~~~--~~~e~F~l~~~~~g~v~Lrs~~G~yls~~~-~g~l~~~~~-~~~~e~ 75 (119)
T cd00257 2 PQVVLRSV-NGRYLSAEAGG-DKVDANRDSL--KGDETFTLEFDNTGKYALRSHDGKYLSADS-DGGVQLEGH-PNADCR 75 (119)
T ss_pred cEEEEEEc-CCCEEEEeccC-CEEEEcCccC--CCceEEEEEECCCCeEEEEECCCcEEEEEC-CCCEEecCC-CCCCcE
Confidence 48999999 99999999988 5999999999 999999999998999999999999999987 778999999 999999
Q ss_pred eEEEecCCCCceeEEEecCCceEEEecccEEecCCC
Q 046395 98 FQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYK 133 (535)
Q Consensus 98 f~~~~~~~~~~~v~I~~~nG~flq~~~~~~v~a~~~ 133 (535)
|++...++ +.+.|++.||+||.+.....+.+...
T Consensus 76 F~~e~~~~--g~~al~~~~G~yl~~~~~g~l~~~~~ 109 (119)
T cd00257 76 FTLEFHGD--GKWALRAENGRYLGGDGSGTLKASSE 109 (119)
T ss_pred EEEEECCC--CeEEEEcCCCCEEeecCCCeEEEecC
Confidence 99998753 46899999999999986666676654
|
|
| >TIGR03356 BGL beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.4e-16 Score=166.53 Aligned_cols=181 Identities=22% Similarity=0.295 Sum_probs=131.7
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-+|++|.||+| +++.||+|+..... . + .+......+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 9 ~atsa~Q~EG~~~~~gkg~s~wd~~~~~-~-~--~~~~~~~~~~a~----d~y~~y--~eDi~l~~~~G~~~~R~si~W- 77 (427)
T TIGR03356 9 VATASYQIEGAVNEDGRGPSIWDTFSHT-P-G--KVKDGDTGDVAC----DHYHRY--EEDVALMKELGVDAYRFSIAW- 77 (427)
T ss_pred eechHHhhCCCcCCCCCccchhheeccC-C-C--cccCCCCCCccc----cHHHhH--HHHHHHHHHcCCCeEEcccch-
Confidence 457889999999 44789999874321 0 0 111222334566 889888 899999999999999999986
Q ss_pred cccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhC
Q 046395 205 IAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRYA 283 (535)
Q Consensus 205 ~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~ 283 (535)
.++.|...+.++++.+++++++|+.|.++||.+||+||+. +.+........|. ++..+.|+++++.+++||+
T Consensus 78 sri~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~Hf-------d~P~~l~~~gGw~~~~~~~~f~~ya~~~~~~~~ 150 (427)
T TIGR03356 78 PRIFPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYHW-------DLPQALEDRGGWLNRDTAEWFAEYAAVVAERLG 150 (427)
T ss_pred hhcccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeeccC-------CccHHHHhcCCCCChHHHHHHHHHHHHHHHHhC
Confidence 7788873235888999999999999999999999999974 2222111224565 7889999999999999999
Q ss_pred CCCcEEEEEeecCCCCC------------CCC--h------HHHHHHHHHHHHHHHhcCCCcEE
Q 046395 284 DHPSLVAIELMNEPKAP------------DLK--L------DSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 284 ~~p~V~~~el~NEP~~~------------~~~--~------~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
+ .|-.|+++|||... ... . ..+.....++++++|+..|+..|
T Consensus 151 d--~v~~w~t~NEp~~~~~~~y~~G~~~P~~~~~~~~~~~~hnll~Aha~A~~~~~~~~~~~~I 212 (427)
T TIGR03356 151 D--RVKHWITLNEPWCSAFLGYGLGVHAPGLRDLRAALQAAHHLLLAHGLAVQALRANGPGAQV 212 (427)
T ss_pred C--cCCEEEEecCcceecccchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 9 67779999999742 101 0 12223345667788887776443
|
|
| >COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.9e-16 Score=162.74 Aligned_cols=156 Identities=21% Similarity=0.346 Sum_probs=126.4
Q ss_pred cEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
...+|++|.||+|. .+.+|+|+........+ .+..+++++.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 11 G~AtAa~Q~EGa~~~dGkg~s~wD~~~~~~~~~--~~~~~~~~~~a~----d~YhrY--keDi~L~~emG~~~~R~SI~W 82 (460)
T COG2723 11 GGATAAFQVEGAWNEDGKGPSDWDVWVHDEIPG--RLVSGDPPEEAS----DFYHRY--KEDIALAKEMGLNAFRTSIEW 82 (460)
T ss_pred ecccccccccCCcCCCCCCCeeeeeeeccccCC--cccCCCCCcccc----chhhhh--HHHHHHHHHcCCCEEEeeeeE
Confidence 35678999999994 38889998765432111 234456777888 999999 999999999999999999997
Q ss_pred ccccCCCCCC-CCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCC-CCCC-hHHHHHHHHHHHHHHH
Q 046395 204 WIAYDPKPPK-PFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGF-QEWS-DSDIQETVAIIDFLAS 280 (535)
Q Consensus 204 w~~~~p~~~~-~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~-~~W~-~~~~~~~~~~~~~la~ 280 (535)
.++-|++.+ ..++..++.++++|+.|.++||.++|+|||. +.+-..... .+|. ++.++.|+++.+.+++
T Consensus 83 -sRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~Hf-------d~P~~L~~~ygGW~nR~~i~~F~~ya~~vf~ 154 (460)
T COG2723 83 -SRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLYHF-------DLPLWLQKPYGGWENRETVDAFARYAATVFE 154 (460)
T ss_pred -EEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeccc-------CCcHHHhhccCCccCHHHHHHHHHHHHHHHH
Confidence 677776544 5789999999999999999999999999985 222222222 4676 7899999999999999
Q ss_pred HhCCCCcEEEEEeecCCCC
Q 046395 281 RYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 281 ry~~~p~V~~~el~NEP~~ 299 (535)
||+| .|-.|-++|||..
T Consensus 155 ~f~d--kVk~W~TFNE~n~ 171 (460)
T COG2723 155 RFGD--KVKYWFTFNEPNV 171 (460)
T ss_pred HhcC--cceEEEEecchhh
Confidence 9999 8999999999986
|
|
| >PRK13511 6-phospho-beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=8e-15 Score=157.73 Aligned_cols=149 Identities=19% Similarity=0.321 Sum_probs=119.6
Q ss_pred cEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+| +++.||+|+..... . +. ...+.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 12 G~Atsa~QiEG~~~~~Gkg~siwD~~~~~-~-~~------~~~~~a~----d~Y~ry--~eDi~L~~~lG~~~yRfSIsW 77 (469)
T PRK13511 12 GGATAAYQAEGATKTDGKGPVAWDKYLEE-N-YW------FTPDPAS----DFYHRY--PEDLKLAEEFGVNGIRISIAW 77 (469)
T ss_pred EeechHhhhcCCcCCCCCccchhhccccc-C-CC------CCCCccc----chhhhh--HHHHHHHHHhCCCEEEeeccH
Confidence 3567899999999 45889999864311 1 00 1234566 899999 999999999999999999997
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|+..+.++++.+++++++|+.|.++||.++|+|||. +.+........|. ++..+.|.++.+.++++|
T Consensus 78 -sRI~P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~H~-------dlP~~L~~~GGW~n~~~v~~F~~YA~~~~~~f 149 (469)
T PRK13511 78 -SRIFPDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLHHF-------DTPEALHSNGDWLNRENIDHFVRYAEFCFEEF 149 (469)
T ss_pred -hhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCC-------CCcHHHHHcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7888864345889999999999999999999999999984 3333222335676 889999999999999999
Q ss_pred CCCCcEEEEEeecCCCC
Q 046395 283 ADHPSLVAIELMNEPKA 299 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~ 299 (535)
+| |--|-++|||..
T Consensus 150 gd---Vk~W~T~NEP~~ 163 (469)
T PRK13511 150 PE---VKYWTTFNEIGP 163 (469)
T ss_pred CC---CCEEEEccchhh
Confidence 99 777999999974
|
|
| >PLN02849 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.8e-15 Score=160.67 Aligned_cols=154 Identities=23% Similarity=0.327 Sum_probs=123.8
Q ss_pred ceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-+|++|.||+| +++.||+|+..... . .....+.|. +||+.| ++|+++||++|+|
T Consensus 33 dFl----wG~AtsA~QiEGa~~~~Gkg~SiwD~~~~~-~-------~~~~~~~a~----D~YhrY--~eDI~Lm~~lG~~ 94 (503)
T PLN02849 33 GFV----FGAGTSAYQWEGAFDEDGRKPSVWDTFLHS-R-------NMSNGDIAC----DGYHKY--KEDVKLMVETGLD 94 (503)
T ss_pred CCE----EEeechhhhhcCCcCCCCCcCcceeeeecc-C-------CCCCCCccc----cHHHhH--HHHHHHHHHcCCC
Confidence 566 33667899999999 45789999874321 1 112234465 899998 9999999999999
Q ss_pred EEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQETVA 273 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~~~ 273 (535)
+.|++|.| .++.|+..++++++.+++++++|+.|.++||.++|+|||. +.+..... +..|. ++..+.|.+
T Consensus 95 aYRfSIsW-sRI~P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~H~-------dlP~~L~~~yGGW~nr~~v~~F~~ 166 (503)
T PLN02849 95 AFRFSISW-SRLIPNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLFHY-------DHPQYLEDDYGGWINRRIIKDFTA 166 (503)
T ss_pred eEEEeccH-HhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeecCC-------CCcHHHHHhcCCcCCchHHHHHHH
Confidence 99999997 7888875445899999999999999999999999999984 33332222 35676 789999999
Q ss_pred HHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 274 IIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 274 ~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
+.+.++++|+| .|-.|-++|||..
T Consensus 167 YA~~~f~~fgD--rVk~WiT~NEP~~ 190 (503)
T PLN02849 167 YADVCFREFGN--HVKFWTTINEANI 190 (503)
T ss_pred HHHHHHHHhcC--cCCEEEEecchhh
Confidence 99999999999 8888999999984
|
|
| >TIGR01233 lacG 6-phospho-beta-galactosidase | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-14 Score=156.21 Aligned_cols=149 Identities=16% Similarity=0.267 Sum_probs=119.4
Q ss_pred cEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-+|++|.||+| +++.||+|+..... . +. ...+.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 11 G~AtsA~QvEG~~~~~Gkg~siwD~~~~~-~-~~------~~~~~a~----d~yhry--~eDi~L~~~lG~~~yRfSIsW 76 (467)
T TIGR01233 11 GGATAAYQAEGATHTDGKGPVAWDKYLED-N-YW------YTAEPAS----DFYHKY--PVDLELAEEYGVNGIRISIAW 76 (467)
T ss_pred eeechhhhcCCCcCCCCCcCchhhccccC-C-CC------CCCCccC----chhhhH--HHHHHHHHHcCCCEEEEecch
Confidence 3567899999999 45889999863311 1 00 1234555 899999 999999999999999999997
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|...+.++++.+++++++|+.|.++||.++|+|||. +.+........|. ++.++.|.++.+.++++|
T Consensus 77 -sRI~P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~H~-------dlP~~L~~~GGW~n~~~v~~F~~YA~~~f~~f 148 (467)
T TIGR01233 77 -SRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHF-------DTPEALHSNGDFLNRENIEHFIDYAAFCFEEF 148 (467)
T ss_pred -hhccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEeccCC-------CCcHHHHHcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7788864345899999999999999999999999999984 3333223345676 899999999999999999
Q ss_pred CCCCcEEEEEeecCCCC
Q 046395 283 ADHPSLVAIELMNEPKA 299 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~ 299 (535)
++ |--|-++|||..
T Consensus 149 gd---Vk~WiT~NEP~~ 162 (467)
T TIGR01233 149 PE---VNYWTTFNEIGP 162 (467)
T ss_pred CC---CCEEEEecchhh
Confidence 84 778999999974
|
This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation. |
| >PLN02814 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.9e-15 Score=159.91 Aligned_cols=154 Identities=23% Similarity=0.321 Sum_probs=123.3
Q ss_pred ceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-||++|.||+| +++.||+|+..... ......+.|. +||+.| ++|+++||++|+|
T Consensus 31 ~Fl----wG~AtaA~QiEGa~~~~gkg~siwD~~~~~--------~~~~~~~~a~----D~Yhry--~EDI~L~k~lG~~ 92 (504)
T PLN02814 31 DFL----FGAATSAYQWEGAVDEDGRTPSVWDTTSHC--------YNGGNGDIAS----DGYHKY--KEDVKLMAEMGLE 92 (504)
T ss_pred CCE----EeeechhhhhcCCcCCCCCccchhheeeec--------cCCCCCCccc----cHHHhh--HHHHHHHHHcCCC
Confidence 566 33567899999998 45789999874310 0112334566 899998 9999999999999
Q ss_pred EEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQETVA 273 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~~~ 273 (535)
+.|++|.| .++.|+..+.++++.+++++++|+.|.++||.++|+|||. +.+..... +..|. ++..+.|.+
T Consensus 93 ayRfSIsW-sRI~P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~H~-------dlP~~L~~~yGGW~n~~~i~~F~~ 164 (504)
T PLN02814 93 SFRFSISW-SRLIPNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLYHY-------DLPQSLEDEYGGWINRKIIEDFTA 164 (504)
T ss_pred EEEEeccH-hhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEecCC-------CCCHHHHHhcCCcCChhHHHHHHH
Confidence 99999997 7788864345899999999999999999999999999984 33322222 35676 789999999
Q ss_pred HHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 274 IIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 274 ~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
+.+.++++|+| .|-.|-++|||..
T Consensus 165 YA~~~f~~fgd--rVk~WiT~NEP~~ 188 (504)
T PLN02814 165 FADVCFREFGE--DVKLWTTINEATI 188 (504)
T ss_pred HHHHHHHHhCC--cCCEEEeccccch
Confidence 99999999999 8888999999984
|
|
| >PLN02998 beta-glucosidase | Back alignment and domain information |
|---|
Probab=99.57 E-value=4.9e-15 Score=159.65 Aligned_cols=156 Identities=21% Similarity=0.310 Sum_probs=123.3
Q ss_pred ceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-+|++|.||+| +++.||+|+...... . ......+.|. +||+.| ++|+++||++|+|
T Consensus 34 ~Fl----wG~AtSA~QvEGa~~~~Gkg~siwD~~~~~~----~--~~~~~~~~a~----D~Yhry--~EDi~lmk~lG~~ 97 (497)
T PLN02998 34 GFV----FGSGTSAYQVEGAADEDGRTPSIWDVFAHAG----H--SGVAAGNVAC----DQYHKY--KEDVKLMADMGLE 97 (497)
T ss_pred CCE----EeeechHHHhCCCcCCCCCccchhhcccccC----c--CCCCCCcccc----cHHHhh--HHHHHHHHHcCCC
Confidence 566 33667899999999 457899998743211 1 0001234466 899999 9999999999999
Q ss_pred EEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQETVA 273 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~~~ 273 (535)
+.|++|.| .++.|+..+.++++++++++++|+.|.++||.++|+|||. +.+..... +..|. ++..+.|.+
T Consensus 98 ~YRfSIsW-sRI~P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~H~-------dlP~~L~~~yGGW~n~~~v~~F~~ 169 (497)
T PLN02998 98 AYRFSISW-SRLLPSGRGPINPKGLQYYNNLIDELITHGIQPHVTLHHF-------DLPQALEDEYGGWLSQEIVRDFTA 169 (497)
T ss_pred eEEeeccH-HhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEecCC-------CCCHHHHHhhCCcCCchHHHHHHH
Confidence 99999997 7888864345899999999999999999999999999984 33332222 35676 789999999
Q ss_pred HHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 274 IIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 274 ~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
+.+.++++|+| .|-.|-++|||..
T Consensus 170 YA~~~~~~fgd--rVk~WiT~NEP~~ 193 (497)
T PLN02998 170 YADTCFKEFGD--RVSHWTTINEVNV 193 (497)
T ss_pred HHHHHHHHhcC--cCCEEEEccCcch
Confidence 99999999999 8888999999985
|
|
| >PRK15014 6-phospho-beta-glucosidase BglA; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.1e-15 Score=157.11 Aligned_cols=157 Identities=18% Similarity=0.307 Sum_probs=118.9
Q ss_pred cEEecCCCCCCCc--ccCCcccceeccc--ccccccch---hhhc-cChhhhhHhHHhhhCccchHHHHHHHHHcCCCEE
Q 046395 126 MQVTADYKGPSTW--EENDPSVFNMTIV--STMHGEYQ---ITNG-YGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAV 197 (535)
Q Consensus 126 ~~v~a~~~~~~~w--~~~~ps~f~~~~~--~~~~~e~~---~~~~-~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~V 197 (535)
..-+|++|.||+| +++.||+|+.... ....+... .... ...+.|. +||+.| ++|+++||++|+|+.
T Consensus 13 G~AtsA~QiEGa~~e~Gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~A~----D~Yhry--~EDI~Lm~elG~~~y 86 (477)
T PRK15014 13 GGAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVVPGKYYPNHEAV----DFYGHY--KEDIKLFAEMGFKCF 86 (477)
T ss_pred eeecHHHHhCCCcCCCCCcccHhhccccccccCccccccccccCCcCCCCccc----Cccccc--HHHHHHHHHcCCCEE
Confidence 3567899999999 4588999987431 10000000 0000 1234566 899999 999999999999999
Q ss_pred EeCCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHHHHHHH
Q 046395 198 RIPVGWWIAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQETVAI 274 (535)
Q Consensus 198 Ripv~~w~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~~~~~~ 274 (535)
|++|.| .++.|.. +..+++..+++++++|+.|.++||.++|+|||. +.+.... .+..|. ++..+.|+++
T Consensus 87 RfSIsW-sRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL~H~-------dlP~~L~~~yGGW~n~~~~~~F~~Y 158 (477)
T PRK15014 87 RTSIAW-TRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHF-------EMPLHLVQQYGSWTNRKVVDFFVRF 158 (477)
T ss_pred Eecccc-eeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCC-------CCCHHHHHhcCCCCChHHHHHHHHH
Confidence 999997 6777763 233688999999999999999999999999874 2222221 235675 7899999999
Q ss_pred HHHHHHHhCCCCcEEEEEeecCCC
Q 046395 275 IDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 275 ~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
++.++++|+| .|-.|-++|||.
T Consensus 159 a~~~f~~fgd--rVk~WiT~NEp~ 180 (477)
T PRK15014 159 AEVVFERYKH--KVKYWMTFNEIN 180 (477)
T ss_pred HHHHHHHhcC--cCCEEEEecCcc
Confidence 9999999999 688899999996
|
|
| >PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-14 Score=151.82 Aligned_cols=145 Identities=28% Similarity=0.431 Sum_probs=107.3
Q ss_pred hhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecC--CCCC------
Q 046395 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH--ALRV------ 246 (535)
Q Consensus 175 ~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH--~~pg------ 246 (535)
+||+....++|++.|+++|+|+|||....|..++|.+|. | .+..||++|+.|.++||+|||.+- ..|.
T Consensus 5 e~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~-y---dF~~lD~~l~~a~~~Gi~viL~~~~~~~P~Wl~~~~ 80 (374)
T PF02449_consen 5 EQWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQ-Y---DFSWLDRVLDLAAKHGIKVILGTPTAAPPAWLYDKY 80 (374)
T ss_dssp GGS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB-------HHHHHHHHHHHCTT-EEEEEECTTTS-HHHHCCS
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCCe-e---ecHHHHHHHHHHHhccCeEEEEecccccccchhhhc
Confidence 789888899999999999999999987778899999886 8 789999999999999999999884 3331
Q ss_pred ------CCCCCC-CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-CC---ChHHHHHHHHHHH
Q 046395 247 ------SQNGSP-HSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-DL---KLDSLKTYYKAGY 315 (535)
Q Consensus 247 ------~~ng~~-~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-~~---~~~~~~~~~~~~~ 315 (535)
..+|.. ..|.+...+..++.+++.+.++++.|++||+++|+|++|+|.|||... .. +...++.|+++-|
T Consensus 81 Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p~vi~~~i~NE~~~~~~~~~~~~~~f~~wLk~kY 160 (374)
T PF02449_consen 81 PEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHPAVIGWQIDNEPGYHRCYSPACQAAFRQWLKEKY 160 (374)
T ss_dssp GCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTTTEEEEEECCSTTCTS--SHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccceEEEEEeccccCcCcCCChHHHHHHHHHHHHHh
Confidence 011111 122232333444889999999999999999999999999999999862 22 3467899999999
Q ss_pred HHHHhcCC
Q 046395 316 DTVRKYSS 323 (535)
Q Consensus 316 ~aIR~~~p 323 (535)
..|.+.+.
T Consensus 161 ~ti~~LN~ 168 (374)
T PF02449_consen 161 GTIEALNR 168 (374)
T ss_dssp SSHHHHHH
T ss_pred CCHHHHHH
Confidence 88877764
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A. |
| >PRK09589 celA 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-14 Score=155.22 Aligned_cols=157 Identities=20% Similarity=0.304 Sum_probs=119.9
Q ss_pred EEecCCCCCCCc--ccCCcccceeccc--ccccccch--hhhc--cChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEE
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIV--STMHGEYQ--ITNG--YGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVR 198 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~--~~~~~e~~--~~~~--~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VR 198 (535)
.-+|++|.||+| +++.||+|+.... ....+... .... +..+.|. +||+.| ++|+++||++|+|+.|
T Consensus 12 ~AtsA~QiEGa~~~~gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~a~----D~Yhry--~eDi~Lm~~lG~~~yR 85 (476)
T PRK09589 12 GAVAAHQLEGGWNEGGKGISVADVMTAGAHGVPREITEGVIEGKNYPNHEAI----DFYHRY--KEDIALFAEMGFKCFR 85 (476)
T ss_pred eechHhhhcCCcCCCCCCCchhcccccccccCccccccCccCCCcCCCcccc----cHHHhh--HHHHHHHHHcCCCEEE
Confidence 567899999999 4588999987431 10000000 0011 1234566 899999 9999999999999999
Q ss_pred eCCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHHHHHHHH
Q 046395 199 IPVGWWIAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQETVAII 275 (535)
Q Consensus 199 ipv~~w~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~~~~~~~ 275 (535)
++|.| .++.|+. ++.++++.+++++++|+.|.++||.++|+|||. +.+.... .+..|. ++..+.|.++.
T Consensus 86 fSIsW-sRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~H~-------dlP~~L~~~yGGW~n~~~i~~F~~YA 157 (476)
T PRK09589 86 TSIAW-TRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLSHF-------EMPYHLVTEYGGWRNRKLIDFFVRFA 157 (476)
T ss_pred eccch-hhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCC-------CCCHHHHHhcCCcCChHHHHHHHHHH
Confidence 99997 7888863 223688999999999999999999999999984 3332221 235676 78999999999
Q ss_pred HHHHHHhCCCCcEEEEEeecCCCC
Q 046395 276 DFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 276 ~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
+.++++|+| .|--|-++|||..
T Consensus 158 ~~~f~~fgd--rVk~WiT~NEp~~ 179 (476)
T PRK09589 158 EVVFTRYKD--KVKYWMTFNEINN 179 (476)
T ss_pred HHHHHHhcC--CCCEEEEecchhh
Confidence 999999999 8888999999973
|
|
| >PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.8e-14 Score=154.55 Aligned_cols=155 Identities=14% Similarity=0.218 Sum_probs=118.1
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccch----------h-hhc-cChhhhhHhHHhhhCccchHHHHHHHHHc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQ----------I-TNG-YGPDKAAKLMRDHWKSYITEEDFKFMSQN 192 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~----------~-~~~-~G~~~a~~~~~~hw~~~ite~D~~~ik~~ 192 (535)
.-+|++|.||+| +++.||+|+..... . +... . ... +..+.|. +||+.| ++|+++|+++
T Consensus 12 ~AtsA~QiEGa~~~~Gkg~siwD~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~A~----D~Yhry--~eDi~l~~~l 83 (474)
T PRK09852 12 GALAANQSEGAFREGGKGLTTVDMIPHG-E-HRMAVKLGLEKRFQLRDDEFYPSHEAI----DFYHRY--KEDIALMAEM 83 (474)
T ss_pred ccchHhhcCCCcCCCCCCCchhhccccC-C-CcccccccccccccccccCcCCCCccC----chhhhh--HHHHHHHHHc
Confidence 457899999999 45889999874321 0 1010 0 000 1234566 899999 9999999999
Q ss_pred CCCEEEeCCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHH
Q 046395 193 GLNAVRIPVGWWIAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQ 269 (535)
Q Consensus 193 G~N~VRipv~~w~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~ 269 (535)
|+|+.|++|.| .++.|+. +..+++..+++++++|+.|.++||.+||+||+. +.+.... .+..|. ++..+
T Consensus 84 G~~~yR~si~W-sRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~H~-------~~P~~l~~~~GGW~~~~~~~ 155 (474)
T PRK09852 84 GFKVFRTSIAW-SRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHF-------DVPMHLVTEYGSWRNRKMVE 155 (474)
T ss_pred CCCeEEeecee-eeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeeCC-------CCCHHHHHhcCCCCCHHHHH
Confidence 99999999998 5666653 223688899999999999999999999999974 2222221 235676 78999
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 270 ETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 270 ~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
.|.++++.++++|+| .|-.|-++|||..
T Consensus 156 ~F~~ya~~~~~~fgd--~Vk~WiTfNEPn~ 183 (474)
T PRK09852 156 FFSRYARTCFEAFDG--LVKYWLTFNEINI 183 (474)
T ss_pred HHHHHHHHHHHHhcC--cCCeEEeecchhh
Confidence 999999999999999 7888999999973
|
|
| >PRK09593 arb 6-phospho-beta-glucosidase; Reviewed | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.6e-14 Score=155.46 Aligned_cols=158 Identities=18% Similarity=0.307 Sum_probs=120.9
Q ss_pred cEEecCCCCCCCc--ccCCcccceeccccc--c---cccc---hhhhc--cChhhhhHhHHhhhCccchHHHHHHHHHcC
Q 046395 126 MQVTADYKGPSTW--EENDPSVFNMTIVST--M---HGEY---QITNG--YGPDKAAKLMRDHWKSYITEEDFKFMSQNG 193 (535)
Q Consensus 126 ~~v~a~~~~~~~w--~~~~ps~f~~~~~~~--~---~~e~---~~~~~--~G~~~a~~~~~~hw~~~ite~D~~~ik~~G 193 (535)
..-||++|.||+| +++.||+|+...... . .++- ...++ ...+.|. +||+.| ++|+++||++|
T Consensus 13 G~AtsA~QiEGa~~~~Gkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~----d~Yhry--~eDi~Lm~~lG 86 (478)
T PRK09593 13 GGATAANQCEGAYNVDGRGLANVDVVPIGEDRFPIITGEKKMFDFEEGYFYPAKEAI----DMYHHY--KEDIALFAEMG 86 (478)
T ss_pred eeechHHHhCCCcCCCCCccchhhccccCcCcccccccccccccccccccCCCCccc----chHHhh--HHHHHHHHHcC
Confidence 3567899999999 458899998633210 0 0000 00000 1234566 899999 99999999999
Q ss_pred CCEEEeCCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHHH
Q 046395 194 LNAVRIPVGWWIAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQE 270 (535)
Q Consensus 194 ~N~VRipv~~w~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~~ 270 (535)
+|+.|++|.| .++.|.. +..++++.+++++++|+.|.++||.++|+|||. +.+.... .+..|. ++..+.
T Consensus 87 ~~aYRfSIsW-sRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~H~-------dlP~~L~~~~GGW~n~~~v~~ 158 (478)
T PRK09593 87 FKTYRMSIAW-TRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTITHF-------DCPMHLIEEYGGWRNRKMVGF 158 (478)
T ss_pred CCEEEEecch-hhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeccc-------CCCHHHHhhcCCCCChHHHHH
Confidence 9999999997 7888863 223788999999999999999999999999984 4433322 235776 788999
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 271 TVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
|.++.+.++++|+| .|-.|-++|||..
T Consensus 159 F~~YA~~~~~~fgd--rVk~WiT~NEP~~ 185 (478)
T PRK09593 159 YERLCRTLFTRYKG--LVKYWLTFNEINM 185 (478)
T ss_pred HHHHHHHHHHHhcC--cCCEEEeecchhh
Confidence 99999999999999 8888999999974
|
|
| >PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.48 E-value=9.7e-15 Score=157.12 Aligned_cols=183 Identities=18% Similarity=0.279 Sum_probs=127.5
Q ss_pred cEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+|. .+.||+|+....... ....+...+.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 12 G~atsa~Q~EG~~~~dGkg~s~wd~~~~~~~----~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lg~~~yRfsi~W 81 (455)
T PF00232_consen 12 GVATSAYQIEGAWNEDGKGPSIWDTFCHEPG----KVEDGSTGDVAC----DHYHRY--KEDIALMKELGVNAYRFSISW 81 (455)
T ss_dssp EEE--HHHHSSSTTSTTSTTBHHHHHHHSTT----SSTTSSSSSSTT----GHHHHH--HHHHHHHHHHT-SEEEEE--H
T ss_pred EEeceeccccceecCCCCCcccccccccccc----eeeccccCcccc----cchhhh--hHHHHHHHhhccceeeeecch
Confidence 35678899999983 477899985432210 011222234455 888888 999999999999999999997
Q ss_pred ccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHH
Q 046395 204 WIAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASR 281 (535)
Q Consensus 204 w~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~r 281 (535)
.++.|.+ .+.+++..++.++++|+.|.++||++||+|||. +.+........|. ++..+.|.++.+.++++
T Consensus 82 -~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL~H~-------~~P~~l~~~ggw~~~~~~~~F~~Ya~~~~~~ 153 (455)
T PF00232_consen 82 -SRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTLYHF-------DLPLWLEDYGGWLNRETVDWFARYAEFVFER 153 (455)
T ss_dssp -HHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEEESS---------BHHHHHHTGGGSTHHHHHHHHHHHHHHHH
T ss_pred -hheeecccccccCHhHhhhhHHHHHHHHhhccceeeeeeec-------ccccceeecccccCHHHHHHHHHHHHHHHHH
Confidence 7888885 345899999999999999999999999999984 2211111123454 68999999999999999
Q ss_pred hCCCCcEEEEEeecCCCCC------------C-CC-------hHHHHHHHHHHHHHHHhcCCCcEEE
Q 046395 282 YADHPSLVAIELMNEPKAP------------D-LK-------LDSLKTYYKAGYDTVRKYSSSAYVI 328 (535)
Q Consensus 282 y~~~p~V~~~el~NEP~~~------------~-~~-------~~~~~~~~~~~~~aIR~~~p~~~ii 328 (535)
|++ .|-.|-++|||... + .+ ...+.....++++++|+..++..|-
T Consensus 154 ~gd--~V~~w~T~NEp~~~~~~~y~~g~~~p~~~~~~~~~~~~h~~l~AHa~A~~~~~~~~~~~~IG 218 (455)
T PF00232_consen 154 FGD--RVKYWITFNEPNVFALLGYLYGGFPPGRDSLKAFYQAAHNLLLAHAKAVKAIKEKYPDGKIG 218 (455)
T ss_dssp HTT--TBSEEEEEETHHHHHHHHHTSSSSTTCSSTHHHHHHHHHHHHHHHHHHHHHHHHHTCTSEEE
T ss_pred hCC--CcceEEeccccceeeccccccccccccccccchhhHHHhhHHHHHHHHHHHHhhcccceEEe
Confidence 999 78889999999741 1 11 1123334556778899988876653
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A .... |
| >PRK10150 beta-D-glucuronidase; Provisional | Back alignment and domain information |
|---|
Probab=99.46 E-value=8e-12 Score=139.43 Aligned_cols=230 Identities=17% Similarity=0.193 Sum_probs=137.9
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCC-CCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQ-NGSPHSGSRDGF 260 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~-ng~~~sg~~~~~ 260 (535)
.+.||++||++|+|+||+.- + |.. ..+++.|.++||+|+-++......+ .+..........
T Consensus 315 ~~~d~~l~K~~G~N~vR~sh-~-------p~~----------~~~~~~cD~~GllV~~E~p~~~~~~~~~~~~~~~~~~~ 376 (604)
T PRK10150 315 NVHDHNLMKWIGANSFRTSH-Y-------PYS----------EEMLDLADRHGIVVIDETPAVGLNLSFGAGLEAGNKPK 376 (604)
T ss_pred HHHHHHHHHHCCCCEEEecc-C-------CCC----------HHHHHHHHhcCcEEEEeccccccccccccccccccccc
Confidence 37899999999999999931 1 111 2368999999999998874311000 000000000111
Q ss_pred CCCC-----hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCC
Q 046395 261 QEWS-----DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGG 335 (535)
Q Consensus 261 ~~W~-----~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~ 335 (535)
..|. ++..+.+.+.++.|.+|+++||+|++|.+.||+.. ..+....+++++++.+|+.||+++|..+.....
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~mv~r~~NHPSIi~Ws~gNE~~~---~~~~~~~~~~~l~~~~k~~DptR~vt~~~~~~~ 453 (604)
T PRK10150 377 ETYSEEAVNGETQQAHLQAIRELIARDKNHPSVVMWSIANEPAS---REQGAREYFAPLAELTRKLDPTRPVTCVNVMFA 453 (604)
T ss_pred ccccccccchhHHHHHHHHHHHHHHhccCCceEEEEeeccCCCc---cchhHHHHHHHHHHHHHhhCCCCceEEEecccC
Confidence 1222 45677888999999999999999999999999864 234567899999999999999999887642100
Q ss_pred ChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcC-------CCC
Q 046395 336 EWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWE-------AEG 408 (535)
Q Consensus 336 ~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~-------~~~ 408 (535)
... .......-.|+++|.|..+.... .........+. ..+..+.+....|++++|||+... ...
T Consensus 454 ~~~---~~~~~~~~Dv~~~N~Y~~wy~~~--~~~~~~~~~~~----~~~~~~~~~~~kP~~isEyg~~~~~~~h~~~~~~ 524 (604)
T PRK10150 454 TPD---TDTVSDLVDVLCLNRYYGWYVDS--GDLETAEKVLE----KELLAWQEKLHKPIIITEYGADTLAGLHSMYDDM 524 (604)
T ss_pred Ccc---cccccCcccEEEEcccceecCCC--CCHHHHHHHHH----HHHHHHHHhcCCCEEEEccCCccccccccCCCCC
Confidence 100 00012335788888775432110 01111111111 122222222245699999995321 112
Q ss_pred CCHHHHHHHHHHHHHHHhh--CCcceEEEeeeeCC
Q 046395 409 ASKRDYQRFAEAQLDVYGR--ATFGWAYWAYKFAE 441 (535)
Q Consensus 409 ~~~~~~~~~~~~ql~~~~~--~~~Gw~~W~~k~~~ 441 (535)
.+.+....+++..++++.+ .-+|-+.|+|..-.
T Consensus 525 ~~ee~q~~~~~~~~~~~~~~p~~~G~~iW~~~D~~ 559 (604)
T PRK10150 525 WSEEYQCAFLDMYHRVFDRVPAVVGEQVWNFADFA 559 (604)
T ss_pred CCHHHHHHHHHHHHHHHhcCCceEEEEEEeeeccC
Confidence 2333333567777777764 33689999987643
|
|
| >PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.45 E-value=1e-11 Score=126.72 Aligned_cols=223 Identities=22% Similarity=0.340 Sum_probs=131.2
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCC-----CCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA-----LRVSQNGSPHSGS 256 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~-----~pg~~ng~~~sg~ 256 (535)
.++-|+.||+.|+|.|||-+ +.+|..++ + ..++...++.+.|+++||+|+||+|- .||.|.
T Consensus 26 ~~d~~~ilk~~G~N~vRlRv----wv~P~~~g-~--~~~~~~~~~akrak~~Gm~vlldfHYSD~WaDPg~Q~------- 91 (332)
T PF07745_consen 26 EKDLFQILKDHGVNAVRLRV----WVNPYDGG-Y--NDLEDVIALAKRAKAAGMKVLLDFHYSDFWADPGKQN------- 91 (332)
T ss_dssp B--HHHHHHHTT--EEEEEE-----SS-TTTT-T--TSHHHHHHHHHHHHHTT-EEEEEE-SSSS--BTTB-B-------
T ss_pred CCCHHHHHHhcCCCeEEEEe----ccCCcccc-c--CCHHHHHHHHHHHHHCCCeEEEeecccCCCCCCCCCC-------
Confidence 36889999999999999966 34555422 1 26888888999999999999999993 244442
Q ss_pred CCCCCCCC----hH----HHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC-------CCCChHHHHHHHHHHHHHHHhc
Q 046395 257 RDGFQEWS----DS----DIQETVAIIDFLASRYADHPSLVAIELMNEPKA-------PDLKLDSLKTYYKAGYDTVRKY 321 (535)
Q Consensus 257 ~~~~~~W~----~~----~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~-------~~~~~~~~~~~~~~~~~aIR~~ 321 (535)
-...|. ++ ..+++.++++.|.+ .+-.| -.++|-||-.. .....+.+..++..++++||+.
T Consensus 92 --~P~aW~~~~~~~l~~~v~~yT~~vl~~l~~-~G~~p--d~VQVGNEin~Gmlwp~g~~~~~~~~a~ll~ag~~AVr~~ 166 (332)
T PF07745_consen 92 --KPAAWANLSFDQLAKAVYDYTKDVLQALKA-AGVTP--DMVQVGNEINNGMLWPDGKPSNWDNLAKLLNAGIKAVREV 166 (332)
T ss_dssp ----TTCTSSSHHHHHHHHHHHHHHHHHHHHH-TT--E--SEEEESSSGGGESTBTTTCTT-HHHHHHHHHHHHHHHHTH
T ss_pred --CCccCCCCCHHHHHHHHHHHHHHHHHHHHH-CCCCc--cEEEeCccccccccCcCCCccCHHHHHHHHHHHHHHHHhc
Confidence 334554 22 23344444444432 33333 34799999653 2345688999999999999999
Q ss_pred CCCcEEEEcCCCCCChh---hhhccc--CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEE
Q 046395 322 SSSAYVILSNRLGGEWS---ELLSFA--SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSF 396 (535)
Q Consensus 322 ~p~~~ii~~~~~g~~~~---~~~~~~--~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~ 396 (535)
+|+..|+++-.-+.+.. .+.+.. .+.+-.|+.+++|+.|.. .++.+... +..+.++.+++++
T Consensus 167 ~p~~kV~lH~~~~~~~~~~~~~f~~l~~~g~d~DviGlSyYP~w~~---------~l~~l~~~----l~~l~~ry~K~V~ 233 (332)
T PF07745_consen 167 DPNIKVMLHLANGGDNDLYRWFFDNLKAAGVDFDVIGLSYYPFWHG---------TLEDLKNN----LNDLASRYGKPVM 233 (332)
T ss_dssp SSTSEEEEEES-TTSHHHHHHHHHHHHHTTGG-SEEEEEE-STTST----------HHHHHHH----HHHHHHHHT-EEE
T ss_pred CCCCcEEEEECCCCchHHHHHHHHHHHhcCCCcceEEEecCCCCcc---------hHHHHHHH----HHHHHHHhCCeeE
Confidence 99999998743323331 121111 346778999999976532 23333332 3334333356799
Q ss_pred EeccCCCcCC------------------CCCCHHHHHHHHHHHHHHHhh----CCcceEEEe
Q 046395 397 VGEWSCEWEA------------------EGASKRDYQRFAEAQLDVYGR----ATFGWAYWA 436 (535)
Q Consensus 397 vGEfg~~~~~------------------~~~~~~~~~~~~~~ql~~~~~----~~~Gw~~W~ 436 (535)
|.|.|..|.. ...+.+.-.+|++++++.... .+.|-+||.
T Consensus 234 V~Et~yp~t~~d~D~~~n~~~~~~~~~~yp~t~~GQ~~~l~~l~~~v~~~p~~~g~GvfYWe 295 (332)
T PF07745_consen 234 VVETGYPWTLDDGDGTGNIIGATSLISGYPATPQGQADFLRDLINAVKNVPNGGGLGVFYWE 295 (332)
T ss_dssp EEEE---SBS--SSSS--SSSSSTGGTTS-SSHHHHHHHHHHHHHHHHTS--TTEEEEEEE-
T ss_pred EEeccccccccccccccccCccccccCCCCCCHHHHHHHHHHHHHHHHHhccCCeEEEEeec
Confidence 9999976541 012345567788888887765 568999984
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A .... |
| >PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.2e-12 Score=113.64 Aligned_cols=100 Identities=31% Similarity=0.378 Sum_probs=87.9
Q ss_pred CcEEEEecCCCceEEeccCCCCCCCCceeEEEEecC-CeEEEEeeCCcEEEeecCCCeEEEeccCCCCCCceEEEecCCC
Q 046395 28 KKYLTAENGSETILMANHNSSSTSSWQTFRLWRINE-TFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEPFQITRKNGE 106 (535)
Q Consensus 28 ~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e~f~~~~~~~~ 106 (535)
++|+++|..|+. |.|||... +.||+|+|+..++ ..+.||..+|+|++++. +|.|+|++++|+++++|+|+.+
T Consensus 2 ~~~~~~~k~~~~-l~an~~~~--~~~e~f~le~~~~~~~v~lrs~~GkYls~~~-~G~v~~~~~~~~~~~~F~i~~~--- 74 (111)
T PF06268_consen 2 NGYLVSEKFGAH-LNANRASL--SDWETFQLEFDDGSYKVALRSHNGKYLSVDS-DGSVVADSETPGPDEFFEIEWH--- 74 (111)
T ss_dssp TEEEEETTCTCB-EEEEESSS--SCGGSEEEEEETTEEEEEEECTTSEEEEEET-TSEEEEEESSSSGGGCBEEEEE---
T ss_pred CcEEEEEEcCCE-EECChhcC--cccEEEEEEEECCCCEEEEEcCCCCEEEEcC-CCeEEecCCCCCCCcEEEEEEC---
Confidence 689999998654 99999999 9999999997776 44679999999999998 8889999999999999999998
Q ss_pred CceeEEEecCCceEEEecccEEecCCCC
Q 046395 107 PHRVRFRASNGYFLQAKSEMQVTADYKG 134 (535)
Q Consensus 107 ~~~v~I~~~nG~flq~~~~~~v~a~~~~ 134 (535)
.+.+.++++||+||.+..+..+.|....
T Consensus 75 ~~~~~~~~~nGkYl~~~~~g~l~a~~~~ 102 (111)
T PF06268_consen 75 GGKVALRASNGKYLSAGPNGQLKANATS 102 (111)
T ss_dssp TTEEEEECTTSCEEEEETTTEEEEEESS
T ss_pred CCEEEEECCCCCEEeeCCCCeEEEcCCC
Confidence 3468899999999998888888876543
|
The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A. |
| >COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.2e-11 Score=135.70 Aligned_cols=165 Identities=24% Similarity=0.360 Sum_probs=123.4
Q ss_pred hhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHH-HHHHHHcCCEEEEec-C-CC-CC----
Q 046395 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNA-FRWAQKYGMKVIVDL-H-AL-RV---- 246 (535)
Q Consensus 175 ~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~-i~~a~~~Gi~VIldl-H-~~-pg---- 246 (535)
.+|++...++|++.||++|+|+||+....|.+.+|.+|. | .|..+|.. ++.|.+.||+|||-- . .+ |.
T Consensus 25 ~~~p~~~w~ddl~~mk~~G~N~V~ig~faW~~~eP~eG~-f---df~~~D~~~l~~a~~~Gl~vil~t~P~g~~P~Wl~~ 100 (673)
T COG1874 25 ERWPRETWMDDLRKMKALGLNTVRIGYFAWNLHEPEEGK-F---DFTWLDEIFLERAYKAGLYVILRTGPTGAPPAWLAK 100 (673)
T ss_pred HHCCHHHHHHHHHHHHHhCCCeeEeeeEEeeccCccccc-c---CcccchHHHHHHHHhcCceEEEecCCCCCCchHHhc
Confidence 566667779999999999999999966667999999887 7 45577777 999999999999977 3 11 21
Q ss_pred --------CCCCC-CCCCCCCCCCCCChHHHHHHHHHHHHHHHH-hCCCCcEEEEEeecCCCC-C---CCChHHHHHHHH
Q 046395 247 --------SQNGS-PHSGSRDGFQEWSDSDIQETVAIIDFLASR-YADHPSLVAIELMNEPKA-P---DLKLDSLKTYYK 312 (535)
Q Consensus 247 --------~~ng~-~~sg~~~~~~~W~~~~~~~~~~~~~~la~r-y~~~p~V~~~el~NEP~~-~---~~~~~~~~~~~~ 312 (535)
..++. ...+.+...|.-++.+++....+.+.|++| |+++|+|++|.+-||-.+ + +.+...++.|.+
T Consensus 101 ~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~~~~~~~v~~w~~dneY~~~~~~~~~~~~~f~~wLk 180 (673)
T COG1874 101 KYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERLYGNGPAVITWQNDNEYGGHPCYCDYCQAAFRLWLK 180 (673)
T ss_pred CChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHHhccCCceeEEEccCccCCccccccccHHHHHHHHH
Confidence 00110 112233334444467888888999999999 999999999999999876 2 345678888999
Q ss_pred HHHHHHHhcCCCcEEEE-cCCCCCChhhhhccc
Q 046395 313 AGYDTVRKYSSSAYVIL-SNRLGGEWSELLSFA 344 (535)
Q Consensus 313 ~~~~aIR~~~p~~~ii~-~~~~g~~~~~~~~~~ 344 (535)
+-+..+...+......+ ++.+ .++.++..+.
T Consensus 181 ~~yg~l~~ln~~w~t~~ws~t~-~~~~~i~~p~ 212 (673)
T COG1874 181 KGYGSLDNLNEAWGTSFWSHTY-KDFDEIMSPN 212 (673)
T ss_pred hCcchHHhhhhhhhhhhccccc-ccHHhhcCCC
Confidence 99998888887766443 6666 6777776553
|
|
| >COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-12 Score=132.76 Aligned_cols=246 Identities=13% Similarity=0.142 Sum_probs=162.4
Q ss_pred HHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCC-----CCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCC
Q 046395 173 MRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK-----PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247 (535)
Q Consensus 173 ~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~-----~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~ 247 (535)
+-.||.....++|++.++.+|++.+|+-+ ++.+ .|....+..+.+++..++.|..++|+|+|.+-.
T Consensus 19 mw~~~~~~ei~~dle~a~~vg~k~lR~fi-----LDgEdc~d~~G~~na~s~~~y~~~fla~a~~l~lkvlitliv---- 89 (587)
T COG3934 19 MWPAIGNREIKADLEPAGFVGVKDLRLFI-----LDGEDCRDKEGYRNAGSNVWYAAWFLAPAGYLDLKVLITLIV---- 89 (587)
T ss_pred HHHHhhhhhhhcccccccCccceeEEEEE-----ecCcchhhhhceecccccHHHHHHHhhhcccCcceEEEEEee----
Confidence 34566654557889999999999999942 2311 222222335999999999999999999998853
Q ss_pred CCCCCCCCCCCCCCCCC-----------hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC-CCCChHHHHHHHHHHH
Q 046395 248 QNGSPHSGSRDGFQEWS-----------DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA-PDLKLDSLKTYYKAGY 315 (535)
Q Consensus 248 ~ng~~~sg~~~~~~~W~-----------~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~-~~~~~~~~~~~~~~~~ 315 (535)
+++|.|.+.-...|. +..+..+.++++.+.+.|+-+|+|++|++-|||.. .+.+...+-.|...++
T Consensus 90 --g~~hmgg~Nw~Ipwag~~~pdn~iyD~k~~~~~kkyvedlVk~yk~~ptI~gw~l~Ne~lv~~p~s~N~f~~w~~emy 167 (587)
T COG3934 90 --GLKHMGGTNWRIPWAGEQSPDNVIYDPKFRGPGKKYVEDLVKPYKLDPTIAGWALRNEPLVEAPISVNNFWDWSGEMY 167 (587)
T ss_pred --cccccCcceeEeecCCCCCccccccchhhcccHHHHHHHHhhhhccChHHHHHHhcCCccccccCChhHHHHHHHHHH
Confidence 222322222222232 45667789999999999999999999999999987 3566789999999999
Q ss_pred HHHHhcCCCcEEEEcCCCCCChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcE
Q 046395 316 DTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLS 395 (535)
Q Consensus 316 ~aIR~~~p~~~ii~~~~~g~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v 395 (535)
..|+.+||+++|-+++.. +-+..+.++.....-..-+.|.|..|+.+- -..+...+. ...+......+-.|+
T Consensus 168 ~yiK~ldd~hlvsvGD~~-sp~~~~~pyN~r~~vDya~~hLY~hyd~sl---~~r~s~~yg----~~~l~i~~~~g~~pV 239 (587)
T COG3934 168 AYIKWLDDGHLVSVGDPA-SPWPQYAPYNARFYVDYAANHLYRHYDTSL---VSRVSTVYG----KPYLDIPTIMGWQPV 239 (587)
T ss_pred HHhhccCCCCeeecCCcC-CcccccCCcccceeeccccchhhhhccCCh---hheeeeeec----chhhccchhccccee
Confidence 999999999999887643 123333333222233345779886543221 011111111 111211222222569
Q ss_pred EEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 396 FVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 396 ~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
++.|||.+..........|+-|... ++...+-|..+||+...
T Consensus 240 ~leefGfsta~g~e~s~ayfiw~~l---al~~ggdGaLiwclsdf 281 (587)
T COG3934 240 NLEEFGFSTAFGQENSPAYFIWIRL---ALDTGGDGALIWCLSDF 281 (587)
T ss_pred eccccCCcccccccccchhhhhhhh---HHhhcCCceEEEEecCC
Confidence 9999998765544445556666653 55557789999999875
|
|
| >KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.9e-12 Score=136.32 Aligned_cols=160 Identities=21% Similarity=0.318 Sum_probs=125.5
Q ss_pred CceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
.+|+-. ..+|+||.||++ +...||+|+.+....++ ..+.....+.|. ++|+.| ++|+++||++|+
T Consensus 39 ~~F~FG----tAtSAyQ~EGA~~e~gRg~svWD~f~~~~p~---~~~~~~ngdva~----D~Yh~y--keDv~Lmk~lgv 105 (524)
T KOG0626|consen 39 KGFLFG----TATSAYQVEGAANEDGRGPSVWDTFTHKYPG---KICDGSNGDVAV----DFYHRY--KEDVKLMKELGV 105 (524)
T ss_pred CCceee----ccchHHHhhhhhccCCCCCchhhhhhccCCc---ccccCCCCCeec----hhhhhh--HHHHHHHHHcCC
Confidence 466644 456789999988 45899999875433221 122333346676 788887 999999999999
Q ss_pred CEEEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCC-CCCCCCC-hHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSR-DGFQEWS-DSDIQE 270 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~-~~~~~W~-~~~~~~ 270 (535)
++.|+.|+| .++-|... ...+++.++++..+|+.+.++||.++|+|.| |+++... +.+..|. ++.++.
T Consensus 106 ~afRFSIsW-SRIlP~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLfH-------wDlPq~LeDeYgGwLn~~ived 177 (524)
T KOG0626|consen 106 DAFRFSISW-SRILPNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLFH-------WDLPQALEDEYGGWLNPEIVED 177 (524)
T ss_pred CeEEEEeeh-HhhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEec-------CCCCHHHHHHhccccCHHHHHH
Confidence 999999997 66666543 3478899999999999999999999999987 3443322 3366777 889999
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 271 TVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
|.++.+.+.++|+| .|-.|-++|||..
T Consensus 178 F~~yA~~CF~~fGD--rVK~WiT~NEP~v 204 (524)
T KOG0626|consen 178 FRDYADLCFQEFGD--RVKHWITFNEPNV 204 (524)
T ss_pred HHHHHHHHHHHhcc--cceeeEEecccce
Confidence 99999999999999 8999999999984
|
|
| >PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=99.26 E-value=4.6e-10 Score=114.49 Aligned_cols=120 Identities=21% Similarity=0.312 Sum_probs=84.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
+.|+.+||++|+|+||+.-. |.. .++++.|.++||.|+.++.....+ .+...+. .....
T Consensus 39 ~~d~~l~k~~G~N~iR~~h~--------p~~----------~~~~~~cD~~GilV~~e~~~~~~~--~~~~~~~-~~~~~ 97 (298)
T PF02836_consen 39 ERDLELMKEMGFNAIRTHHY--------PPS----------PRFYDLCDELGILVWQEIPLEGHG--SWQDFGN-CNYDA 97 (298)
T ss_dssp HHHHHHHHHTT-SEEEETTS----------S----------HHHHHHHHHHT-EEEEE-S-BSCT--SSSSTSC-TSCTT
T ss_pred HHHHHHHHhcCcceEEcccc--------cCc----------HHHHHHHhhcCCEEEEeccccccC--ccccCCc-cccCC
Confidence 79999999999999999221 111 237899999999999998642110 0111110 00001
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
-.++..+.+.+-++.+.+|+++||+|+.|.+.||+ ....+++++++.+|+.||+++|....
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~NHPSIi~W~~gNE~--------~~~~~~~~l~~~~k~~DptRpv~~~~ 158 (298)
T PF02836_consen 98 DDPEFRENAEQELREMVRRDRNHPSIIMWSLGNES--------DYREFLKELYDLVKKLDPTRPVTYAS 158 (298)
T ss_dssp TSGGHHHHHHHHHHHHHHHHTT-TTEEEEEEEESS--------HHHHHHHHHHHHHHHH-TTSEEEEET
T ss_pred CCHHHHHHHHHHHHHHHHcCcCcCchheeecCccC--------ccccchhHHHHHHHhcCCCCceeecc
Confidence 11567888899999999999999999999999999 56788899999999999999987765
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A .... |
| >cd00257 Fascin Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | Back alignment and domain information |
|---|
Probab=99.09 E-value=5e-10 Score=98.29 Aligned_cols=77 Identities=22% Similarity=0.227 Sum_probs=69.7
Q ss_pred CceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCC
Q 046395 17 GTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPE 96 (535)
Q Consensus 17 ~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e 96 (535)
+..|+||| .+|+||+++..| .|.|++. + +.||+|.+-..+++++.||..||+||+++. +|.|.|++++|+.+|
T Consensus 43 ~g~v~Lrs-~~G~yls~~~~g--~l~~~~~-~--~~~e~F~~e~~~~g~~al~~~~G~yl~~~~-~g~l~~~~~~~~~~e 115 (119)
T cd00257 43 TGKYALRS-HDGKYLSADSDG--GVQLEGH-P--NADCRFTLEFHGDGKWALRAENGRYLGGDG-SGTLKASSETVGPDE 115 (119)
T ss_pred CCeEEEEE-CCCcEEEEECCC--CEEecCC-C--CCCcEEEEEECCCCeEEEEcCCCCEEeecC-CCeEEEecCCCCccc
Confidence 57799998 799999998766 5899998 8 999999998888899999999999999987 779999999999999
Q ss_pred ceEE
Q 046395 97 PFQI 100 (535)
Q Consensus 97 ~f~~ 100 (535)
.|.+
T Consensus 116 ~f~~ 119 (119)
T cd00257 116 LFEL 119 (119)
T ss_pred eecC
Confidence 9953
|
|
| >PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.1e-08 Score=117.44 Aligned_cols=188 Identities=18% Similarity=0.220 Sum_probs=116.5
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEec----CCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL----HALRVSQNGSPHSGSR 257 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl----H~~pg~~ng~~~sg~~ 257 (535)
.++|+++||++|+|+||+.- + |..+ .+.+.|.++||+|+-+. |..+ ..+..
T Consensus 357 ~~~dl~lmK~~g~NavR~sH-y-------P~~~----------~fydlcDe~GllV~dE~~~e~~g~~-------~~~~~ 411 (1021)
T PRK10340 357 VEKDIQLMKQHNINSVRTAH-Y-------PNDP----------RFYELCDIYGLFVMAETDVESHGFA-------NVGDI 411 (1021)
T ss_pred HHHHHHHHHHCCCCEEEecC-C-------CCCH----------HHHHHHHHCCCEEEECCcccccCcc-------ccccc
Confidence 37899999999999999841 1 2222 26899999999999875 3321 00000
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCCh
Q 046395 258 DGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEW 337 (535)
Q Consensus 258 ~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~~ 337 (535)
....-.+...+.+.+-++.|.+|+++||+|+.|.+.||.... ....++++.+|+.||.++|..++..
T Consensus 412 -~~~~~~p~~~~~~~~~~~~mV~RdrNHPSIi~WslGNE~~~g--------~~~~~~~~~~k~~DptR~v~~~~~~---- 478 (1021)
T PRK10340 412 -SRITDDPQWEKVYVDRIVRHIHAQKNHPSIIIWSLGNESGYG--------CNIRAMYHAAKALDDTRLVHYEEDR---- 478 (1021)
T ss_pred -ccccCCHHHHHHHHHHHHHHHHhCCCCCEEEEEECccCcccc--------HHHHHHHHHHHHhCCCceEEeCCCc----
Confidence 000001455667777889999999999999999999998631 1236889999999999998765321
Q ss_pred hhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHH
Q 046395 338 SELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRF 417 (535)
Q Consensus 338 ~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~ 417 (535)
....-.|++. +|... +.+.. . .......|+++.|++.+.+...+..++|++.
T Consensus 479 -------~~~~~Dv~~~-~Y~~~-------------~~~~~-----~--~~~~~~kP~i~~Ey~hamgn~~g~~~~yw~~ 530 (1021)
T PRK10340 479 -------DAEVVDVIST-MYTRV-------------ELMNE-----F--GEYPHPKPRILCEYAHAMGNGPGGLTEYQNV 530 (1021)
T ss_pred -------Cccccceecc-ccCCH-------------HHHHH-----H--HhCCCCCcEEEEchHhccCCCCCCHHHHHHH
Confidence 0111233442 23221 11111 0 0111235699999997765444444555543
Q ss_pred HHHHHHHHhhCCcceEEEeeeeC
Q 046395 418 AEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 418 ~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
++. + ..-+|-+.|.|...
T Consensus 531 ~~~----~-p~l~GgfiW~~~D~ 548 (1021)
T PRK10340 531 FYK----H-DCIQGHYVWEWCDH 548 (1021)
T ss_pred HHh----C-CceeEEeeeecCcc
Confidence 322 1 13468899998774
|
|
| >COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.96 E-value=9.8e-08 Score=93.29 Aligned_cols=199 Identities=19% Similarity=0.306 Sum_probs=119.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCC--CCCCCccc--hHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPK--PPKPFVGG--SLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD 258 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~--~~~~~~~~--~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~ 258 (535)
++-|+.||..|+|.|||-| +.+|. .+.+|-.+ .++..-++-+.|+..||+|++|+|-- .-|..++...
T Consensus 66 qD~~~iLK~~GvNyvRlRv----wndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFHYS----DfwaDPakQ~ 137 (403)
T COG3867 66 QDALQILKNHGVNYVRLRV----WNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFHYS----DFWADPAKQK 137 (403)
T ss_pred HHHHHHHHHcCcCeEEEEE----ecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeeccch----hhccChhhcC
Confidence 6778889999999999966 23443 22334332 57777778888999999999999931 0012222222
Q ss_pred CCCCCC----hHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCCCcE
Q 046395 259 GFQEWS----DSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP-------DLKLDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 259 ~~~~W~----~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
....|. +.-....-++-+...+.+++.. ..-+.++-||-... ....+.+...+.+++.+||+.+|+..
T Consensus 138 kPkaW~~l~fe~lk~avy~yTk~~l~~m~~eGi~pdmVQVGNEtn~gflwp~Ge~~~f~k~a~L~n~g~~avrev~p~ik 217 (403)
T COG3867 138 KPKAWENLNFEQLKKAVYSYTKYVLTTMKKEGILPDMVQVGNETNGGFLWPDGEGRNFDKMAALLNAGIRAVREVSPTIK 217 (403)
T ss_pred CcHHhhhcCHHHHHHHHHHHHHHHHHHHHHcCCCccceEeccccCCceeccCCCCcChHHHHHHHHHHhhhhhhcCCCce
Confidence 334454 2222233344444444454432 22346899997652 23567889999999999999999998
Q ss_pred EEEcCCCC--CC-----hhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEec
Q 046395 327 VILSNRLG--GE-----WSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGE 399 (535)
Q Consensus 327 ii~~~~~g--~~-----~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGE 399 (535)
|+++-.-| .+ ++++.. ...+-.|+...+|+.|.. .+..+... +..++....+.|+|-|
T Consensus 218 v~lHla~g~~n~~y~~~fd~ltk--~nvdfDVig~SyYpyWhg---------tl~nL~~n----l~dia~rY~K~VmV~E 282 (403)
T COG3867 218 VALHLAEGENNSLYRWIFDELTK--RNVDFDVIGSSYYPYWHG---------TLNNLTTN----LNDIASRYHKDVMVVE 282 (403)
T ss_pred EEEEecCCCCCchhhHHHHHHHH--cCCCceEEeeeccccccC---------cHHHHHhH----HHHHHHHhcCeEEEEE
Confidence 88863222 11 122222 244567788778865432 22222222 3334444455689999
Q ss_pred cCCCc
Q 046395 400 WSCEW 404 (535)
Q Consensus 400 fg~~~ 404 (535)
-+..+
T Consensus 283 tay~y 287 (403)
T COG3867 283 TAYTY 287 (403)
T ss_pred eccee
Confidence 87643
|
|
| >PRK09525 lacZ beta-D-galactosidase; Reviewed | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.8e-08 Score=116.28 Aligned_cols=115 Identities=20% Similarity=0.223 Sum_probs=83.4
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC-CCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL-RVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~~ng~~~sg~~~~~~ 261 (535)
++||++||++|+|+||+.- + |..+ ++.++|.++||+|+-+.... .|.. . .+..
T Consensus 374 ~~di~lmK~~g~NaVR~sH-y-------P~~p----------~fydlcDe~GilV~dE~~~e~hg~~-~-------~~~~ 427 (1027)
T PRK09525 374 VQDILLMKQHNFNAVRCSH-Y-------PNHP----------LWYELCDRYGLYVVDEANIETHGMV-P-------MNRL 427 (1027)
T ss_pred HHHHHHHHHCCCCEEEecC-C-------CCCH----------HHHHHHHHcCCEEEEecCccccCCc-c-------ccCC
Confidence 6899999999999999931 1 2121 26799999999999886310 0100 0 0000
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 262 EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
.-.++..+.+.+-++.|.+|+++||+|+.|.+.||+... ....++++.+|+.||.++|...+
T Consensus 428 ~~dp~~~~~~~~~~~~mV~RdrNHPSIi~WSlgNE~~~g--------~~~~~l~~~~k~~DptRpV~y~~ 489 (1027)
T PRK09525 428 SDDPRWLPAMSERVTRMVQRDRNHPSIIIWSLGNESGHG--------ANHDALYRWIKSNDPSRPVQYEG 489 (1027)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCCEEEEEeCccCCCcC--------hhHHHHHHHHHhhCCCCcEEECC
Confidence 001456777888899999999999999999999998641 12467889999999999988764
|
|
| >smart00633 Glyco_10 Glycosyl hydrolase family 10 | Back alignment and domain information |
|---|
Probab=98.95 E-value=9.6e-08 Score=95.18 Aligned_cols=199 Identities=17% Similarity=0.209 Sum_probs=124.8
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-----hHHHHHHHHHHHHH
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-----DSDIQETVAIIDFL 278 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-----~~~~~~~~~~~~~l 278 (535)
|..++|.+|. | .++.+|+++++|+++||+|- -|..- .+. ..+.|. ++..+.+.++++.+
T Consensus 3 W~~~ep~~G~-~---n~~~~D~~~~~a~~~gi~v~--gH~l~------W~~----~~P~W~~~~~~~~~~~~~~~~i~~v 66 (254)
T smart00633 3 WDSTEPSRGQ-F---NFSGADAIVNFAKENGIKVR--GHTLV------WHS----QTPDWVFNLSKETLLARLENHIKTV 66 (254)
T ss_pred cccccCCCCc-c---ChHHHHHHHHHHHHCCCEEE--EEEEe------ecc----cCCHhhhcCCHHHHHHHHHHHHHHH
Confidence 4667887775 6 78999999999999999983 23210 000 111222 35678889999999
Q ss_pred HHHhCCCCcEEEEEeecCCCCCCC------ChHHH--HHHHHHHHHHHHhcCCCcEEEEcCCCC--CC---hh-------
Q 046395 279 ASRYADHPSLVAIELMNEPKAPDL------KLDSL--KTYYKAGYDTVRKYSSSAYVILSNRLG--GE---WS------- 338 (535)
Q Consensus 279 a~ry~~~p~V~~~el~NEP~~~~~------~~~~~--~~~~~~~~~aIR~~~p~~~ii~~~~~g--~~---~~------- 338 (535)
++||++ .|..|++.|||..... ..... .+|+..+++++|+++|+..+++.+ |+ .. ..
T Consensus 67 ~~ry~g--~i~~wdV~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~Nd-y~~~~~~~k~~~~~~~v~ 143 (254)
T smart00633 67 VGRYKG--KIYAWDVVNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYND-YNTEEPNAKRQAIYELVK 143 (254)
T ss_pred HHHhCC--cceEEEEeeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEec-cCCcCccHHHHHHHHHHH
Confidence 999998 5888999999986421 11111 278999999999999999888853 32 11 11
Q ss_pred hhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHH
Q 046395 339 ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFA 418 (535)
Q Consensus 339 ~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~ 418 (535)
.+.....+-+.+-+..|.+... .+ .+.+. +.|..+.+. +.|++|+|+...... +.+...+++
T Consensus 144 ~l~~~g~~iDgiGlQ~H~~~~~------~~----~~~~~----~~l~~~~~~-g~pi~iTE~dv~~~~---~~~~qA~~~ 205 (254)
T smart00633 144 KLKAKGVPIDGIGLQSHLSLGS------PN----IAEIR----AALDRFASL-GLEIQITELDISGYP---NPQAQAADY 205 (254)
T ss_pred HHHHCCCccceeeeeeeecCCC------CC----HHHHH----HHHHHHHHc-CCceEEEEeecCCCC---cHHHHHHHH
Confidence 1111123356666777876321 11 22222 234445444 556999999876532 213334455
Q ss_pred HHHHHHHhh--CCcceEEEeeee
Q 046395 419 EAQLDVYGR--ATFGWAYWAYKF 439 (535)
Q Consensus 419 ~~ql~~~~~--~~~Gw~~W~~k~ 439 (535)
+..++++-+ ...|-++|.+..
T Consensus 206 ~~~l~~~~~~p~v~gi~~Wg~~d 228 (254)
T smart00633 206 EEVFKACLAHPAVTGVTVWGVTD 228 (254)
T ss_pred HHHHHHHHcCCCeeEEEEeCCcc
Confidence 556666654 336888998765
|
|
| >PF06268 Fascin: Fascin domain; InterPro: IPR022768 This family consists of several eukaryotic fascin or singed proteins | Back alignment and domain information |
|---|
Probab=98.88 E-value=8.4e-09 Score=89.43 Aligned_cols=77 Identities=19% Similarity=0.230 Sum_probs=69.2
Q ss_pred CceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCC
Q 046395 17 GTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPE 96 (535)
Q Consensus 17 ~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e 96 (535)
+..|+||| .+||||+++.-| .|+|++..+ +.|++|.|-.- ++...||..||+||++.. +|.|.|++++|+.+|
T Consensus 35 ~~~v~lrs-~~GkYls~~~~G--~v~~~~~~~--~~~~~F~i~~~-~~~~~~~~~nGkYl~~~~-~g~l~a~~~~~~~~e 107 (111)
T PF06268_consen 35 SYKVALRS-HNGKYLSVDSDG--SVVADSETP--GPDEFFEIEWH-GGKVALRASNGKYLSAGP-NGQLKANATSPGKDE 107 (111)
T ss_dssp EEEEEEEC-TTSEEEEEETTS--EEEEEESSS--SGGGCBEEEEE-TTEEEEECTTSCEEEEET-TTEEEEEESSSSGGG
T ss_pred CCEEEEEc-CCCCEEEEcCCC--eEEecCCCC--CCCcEEEEEEC-CCEEEEECCCCCEEeeCC-CCeEEEcCCCCCcce
Confidence 46678995 799999998766 699999988 99999999987 778889999999999887 889999999999999
Q ss_pred ceEE
Q 046395 97 PFQI 100 (535)
Q Consensus 97 ~f~~ 100 (535)
-|++
T Consensus 108 lf~~ 111 (111)
T PF06268_consen 108 LFEY 111 (111)
T ss_dssp EEEE
T ss_pred EEeC
Confidence 9975
|
The fascins are a structurally unique and evolutionarily conserved group of actin cross-linking proteins. Fascins function in the organisation of two major forms of actin-based structures: dynamic, cortical cell protrusions and cytoplasmic microfilament bundles. The cortical structures, which include filopodia, spikes, lamellipodial ribs, oocyte microvilli and the dendrites of dendritic cells, have roles in cell-matrix adhesion, cell interactions and cell migration, whereas the cytoplasmic actin bundles appear to participate in cell architecture []. Dictyostelium hisactophilin, another actin-binding protein, is a submembranous pH sensor that signals slight changes of the H+ concentration to actin by inducing actin polymerisation and binding to microfilaments only at pH values below seven []. Members of this family are histidine rich, typically contain the repeated motif of HHXH []. ; GO: 0030674 protein binding, bridging, 0051015 actin filament binding; PDB: 1DFC_B 3P53_B 3LLP_A 1HCE_A 1HCD_A. |
| >PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.8e-07 Score=90.53 Aligned_cols=120 Identities=17% Similarity=0.201 Sum_probs=72.8
Q ss_pred chHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGF 260 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~ 260 (535)
+.+.|+..|+++|+|+||+ | .++|.. --|..++.+.+.||||||||-....+-+... ..
T Consensus 54 ~C~rDi~~l~~LgiNtIRV---Y--~vdp~~----------nHd~CM~~~~~aGIYvi~Dl~~p~~sI~r~~------P~ 112 (314)
T PF03198_consen 54 ACKRDIPLLKELGINTIRV---Y--SVDPSK----------NHDECMSAFADAGIYVILDLNTPNGSINRSD------PA 112 (314)
T ss_dssp HHHHHHHHHHHHT-SEEEE---S-----TTS------------HHHHHHHHHTT-EEEEES-BTTBS--TTS--------
T ss_pred HHHHhHHHHHHcCCCEEEE---E--EeCCCC----------CHHHHHHHHHhCCCEEEEecCCCCccccCCC------Cc
Confidence 4589999999999999999 2 334432 3577899999999999999987533322110 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC---CChHHHHHHHHHHHHHHHhcCCCc
Q 046395 261 QEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD---LKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 261 ~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~---~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
..|.....+++ ..+.+.|+.+|+++||-+-||-.... ....-++...+++-+.|++.....
T Consensus 113 ~sw~~~l~~~~----~~vid~fa~Y~N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~R~ 176 (314)
T PF03198_consen 113 PSWNTDLLDRY----FAVIDAFAKYDNTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGYRS 176 (314)
T ss_dssp ----HHHHHHH----HHHHHHHTT-TTEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS--
T ss_pred CCCCHHHHHHH----HHHHHHhccCCceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCCCC
Confidence 24444444444 44445578899999999999987532 124556777777778888866543
|
It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A. |
| >PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.67 E-value=1.3e-07 Score=102.87 Aligned_cols=258 Identities=17% Similarity=0.274 Sum_probs=124.2
Q ss_pred ChhhhhHhHHhhhCccchHHHHHHHH-HcCCCEEEeCCccccccCCC--------CCC-CCccchHHHHHHHHHHHHHcC
Q 046395 165 GPDKAAKLMRDHWKSYITEEDFKFMS-QNGLNAVRIPVGWWIAYDPK--------PPK-PFVGGSLQALDNAFRWAQKYG 234 (535)
Q Consensus 165 G~~~a~~~~~~hw~~~ite~D~~~ik-~~G~N~VRipv~~w~~~~p~--------~~~-~~~~~~l~~ld~~i~~a~~~G 234 (535)
|...+...++.+| .+.+..++ +.||..||+ ++.+.+.- .+. +| .|..+|++++.+.++|
T Consensus 29 ~~g~a~~~l~~~~-----q~~l~~~~~~~gf~yvR~---h~l~~ddm~~~~~~~~~~~~~Y---nf~~lD~i~D~l~~~g 97 (486)
T PF01229_consen 29 GSGRANLLLRADW-----QEQLRELQEELGFRYVRF---HGLFSDDMMVYSESDEDGIPPY---NFTYLDQILDFLLENG 97 (486)
T ss_dssp EES-GGGGGBHHH-----HHHHHHHHCCS--SEEEE---S-TTSTTTT-EEEEETTEEEEE-----HHHHHHHHHHHHCT
T ss_pred CCCchHHHhhHHH-----HHHHHHHHhccCceEEEE---EeeccCchhhccccccCCCCcC---ChHHHHHHHHHHHHcC
Confidence 3345666677777 67778776 799999999 33332110 111 13 6999999999999999
Q ss_pred CEEEEecCCCCCCCCCCCCCCCCCCCCCC-----ChHHHHHHHHHH----HHHHHHhCCCC-cEEEEEeecCCCCCC---
Q 046395 235 MKVIVDLHALRVSQNGSPHSGSRDGFQEW-----SDSDIQETVAII----DFLASRYADHP-SLVAIELMNEPKAPD--- 301 (535)
Q Consensus 235 i~VIldlH~~pg~~ng~~~sg~~~~~~~W-----~~~~~~~~~~~~----~~la~ry~~~p-~V~~~el~NEP~~~~--- 301 (535)
|+++|.|--.|..-. ++. ...-.| .+...+.+.+++ +++.+||+... .--.||++|||....
T Consensus 98 ~~P~vel~f~p~~~~----~~~-~~~~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev~~W~fEiWNEPd~~~f~~ 172 (486)
T PF01229_consen 98 LKPFVELGFMPMALA----SGY-QTVFWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEVSTWYFEIWNEPDLKDFWW 172 (486)
T ss_dssp -EEEEEE-SB-GGGB----SS---EETTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHHTTSEEEESS-TTSTTTSG
T ss_pred CEEEEEEEechhhhc----CCC-CccccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccccceeEEeCcCCCcccccC
Confidence 999999975542110 000 000011 134445555444 55555665321 112489999998742
Q ss_pred -CChHHHHHHHHHHHHHHHhcCCCcEEEEcC--CCC-CC-hhhhhccc--CCCCcEEEEEeecCcCCCcccCCChh---h
Q 046395 302 -LKLDSLKTYYKAGYDTVRKYSSSAYVILSN--RLG-GE-WSELLSFA--SNLSRVVIDVHFYNLFWDNFNKMSVQ---Q 371 (535)
Q Consensus 302 -~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~--~~g-~~-~~~~~~~~--~~~~n~v~d~H~Y~~~~~~~~~~~~~---~ 371 (535)
.....+.++|+.++++||+++|...|- ++ .++ .. ...++.+. ...+-..+++|.|............. .
T Consensus 173 ~~~~~ey~~ly~~~~~~iK~~~p~~~vG-Gp~~~~~~~~~~~~~l~~~~~~~~~~DfiS~H~y~~~~~~~~~~~~~~~~~ 251 (486)
T PF01229_consen 173 DGTPEEYFELYDATARAIKAVDPELKVG-GPAFAWAYDEWCEDFLEFCKGNNCPLDFISFHSYGTDSAEDINENMYERIE 251 (486)
T ss_dssp GG-HHHHHHHHHHHHHHHHHH-TTSEEE-EEEEETT-THHHHHHHHHHHHCT---SEEEEEEE-BESESE-SS-EEEEB-
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCccc-CccccccHHHHHHHHHHHHhcCCCCCCEEEEEecccccccccchhHHhhhh
Confidence 234678999999999999999998743 32 232 11 12333221 22445789999997421111110110 1
Q ss_pred hHHHHHHhhhHHHHHHhhcCC--CcEEEeccCCCcCCCCCCHH-HH-HHHH-HHHHHHHhhCCcceEEEeeee
Q 046395 372 NIDYIYRQRSSDLRNVTTSDG--PLSFVGEWSCEWEAEGASKR-DY-QRFA-EAQLDVYGRATFGWAYWAYKF 439 (535)
Q Consensus 372 ~i~~i~~~~~~~l~~~~~~~~--p~v~vGEfg~~~~~~~~~~~-~~-~~~~-~~ql~~~~~~~~Gw~~W~~k~ 439 (535)
..+.+..........+..... .++.+.||+..........+ .+ -.|+ +..++.....--+..||++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~e~~p~~~~~~tE~n~~~~~~~~~~dt~~~aA~i~k~lL~~~~~~l~~~sywt~sD 324 (486)
T PF01229_consen 252 DSRRLFPELKETRPIINDEADPNLPLYITEWNASISPRNPQHDTCFKAAYIAKNLLSNDGAFLDSFSYWTFSD 324 (486)
T ss_dssp -HHHHHHHHHHHHHHHHTSSSTT--EEEEEEES-SSTT-GGGGSHHHHHHHHH-HHHHGGGT-SEEEES-SBS
T ss_pred hHHHHHHHHHHHHHHHhhccCCCCceeecccccccCCCcchhccccchhhHHHHHHHhhhhhhhhhhccchhh
Confidence 112222222221122223322 35899999876432111111 12 2332 334555443223578999864
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A. |
| >PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.64 E-value=4.2e-08 Score=81.34 Aligned_cols=78 Identities=27% Similarity=0.465 Sum_probs=49.5
Q ss_pred HHHHhCCCCcEEEEEeecC-CCCC---------CCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCChhhhhcccCCC
Q 046395 278 LASRYADHPSLVAIELMNE-PKAP---------DLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNL 347 (535)
Q Consensus 278 la~ry~~~p~V~~~el~NE-P~~~---------~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~~~~~~~~~~~~ 347 (535)
+.++|+++|+|++|||+|| |... ....+.+..|+++++..||+++|.++|..+ .++.+...+... ...
T Consensus 1 iv~~~~~~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pvt~g-~~~~~~~~~~~~-~~~ 78 (88)
T PF12876_consen 1 IVTRFGYDPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPVTSG-FWGGDWEDLEQL-QAE 78 (88)
T ss_dssp -HHHTT-GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-EE---B--S-TTHHHHS---T
T ss_pred CchhhcCCCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcEEee-cccCCHHHHHHh-chh
Confidence 4678999999999999999 7621 113478899999999999999999997654 343333334333 224
Q ss_pred CcEEEEEeec
Q 046395 348 SRVVIDVHFY 357 (535)
Q Consensus 348 ~n~v~d~H~Y 357 (535)
.-.++++|.|
T Consensus 79 ~~DvisfH~Y 88 (88)
T PF12876_consen 79 NLDVISFHPY 88 (88)
T ss_dssp T-SSEEB-EE
T ss_pred cCCEEeeecC
Confidence 5678999998
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B. |
| >PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.63 E-value=4e-07 Score=93.55 Aligned_cols=135 Identities=19% Similarity=0.256 Sum_probs=87.3
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++.++.||++|+|+|-++|.| ...+|.++. |+-+....|+++|+.|+++||+|||-.-..- ...++. .|.+.
T Consensus 27 ~~~l~k~ka~G~n~v~~yv~W-~~he~~~g~-~df~g~~dl~~f~~~a~~~gl~vilrpGpyi--~aE~~~----gG~P~ 98 (319)
T PF01301_consen 27 RDRLQKMKAAGLNTVSTYVPW-NLHEPEEGQ-FDFTGNRDLDRFLDLAQENGLYVILRPGPYI--CAEWDN----GGLPA 98 (319)
T ss_dssp HHHHHHHHHTT-SEEEEE--H-HHHSSBTTB----SGGG-HHHHHHHHHHTT-EEEEEEES-----TTBGG----GG--G
T ss_pred HHHHHHHHhCCcceEEEeccc-cccCCCCCc-ccccchhhHHHHHHHHHHcCcEEEeccccee--cccccc----hhhhh
Confidence 899999999999999999987 677888876 8777778899999999999999998643110 000110 11222
Q ss_pred C------------ChHHHHHHHHHHHHHHHHhCC-----CCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCc
Q 046395 263 W------------SDSDIQETVAIIDFLASRYAD-----HPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 263 W------------~~~~~~~~~~~~~~la~ry~~-----~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
| ++.+.+...++++.|++..+. .-.||+.+|-||.... ..-+.|++.+.++.++.....
T Consensus 99 Wl~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~GGpII~vQvENEyg~~----~~~~~Y~~~l~~~~~~~g~~~ 174 (319)
T PF01301_consen 99 WLLRKPDIRLRTNDPPFLEAVERWYRALAKIIKPLQYTNGGPIIMVQVENEYGSY----GTDRAYMEALKDAYRDWGIDP 174 (319)
T ss_dssp GGGGSTTS-SSSS-HHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEEESSSGGCT----SS-HHHHHHHHHHHHHTT-SS
T ss_pred hhhccccccccccchhHHHHHHHHHHHHHHHHHhhhhcCCCceehhhhhhhhCCC----cccHhHHHHHHHHHHHhhCcc
Confidence 2 156777777777777775433 3469999999998732 233677888888888887774
Q ss_pred EEEE
Q 046395 326 YVIL 329 (535)
Q Consensus 326 ~ii~ 329 (535)
.+..
T Consensus 175 ~~~~ 178 (319)
T PF01301_consen 175 VLLY 178 (319)
T ss_dssp SBEE
T ss_pred ceee
Confidence 4444
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B .... |
| >PF06229 FRG1: FRG1-like family; InterPro: IPR010414 This entry represents Frg1 (FSHD region gene 1), a protein that is considered to be a candidate for facioscapulohumeral muscular dystrophy (FSHD) | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.2e-07 Score=89.53 Aligned_cols=82 Identities=20% Similarity=0.233 Sum_probs=51.4
Q ss_pred CCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCC
Q 046395 16 DGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFP 95 (535)
Q Consensus 16 ~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~ 95 (535)
+-++|+||| .+|||||++.-| .|+|+++++ |++|+|.+..-+++.-.|...|++|+++.. .+.|+|++.+++..
T Consensus 37 ~~~~iafKs-~~GkYLs~Dk~G--~v~a~sdAi--Gp~E~f~~V~~~~~~a~~~~~~~~FLs~~~-~~~i~a~s~~a~~~ 110 (191)
T PF06229_consen 37 GDEKIAFKS-GHGKYLSCDKDG--IVSARSDAI--GPQEQFEPVFQDGKPALFSSSNNKFLSVDE-EGDIRADSKTAGEN 110 (191)
T ss_dssp SSS-EEEEE-TTS-BEEE-SSS--BEEE--SS----TTTBEEEE-STT--EEEE-TTS-BEEE-S-SS-EEE--S---TT
T ss_pred CCCceEeec-cCccEEEEcCCC--cEEEEeecC--CCceEEEEEECCCCeEEEecCCCeEEEEec-ccCeeeccccCCCC
Confidence 447899998 699999999766 899999999 999999999976655555558999999987 55599999999999
Q ss_pred CceEEEec
Q 046395 96 EPFQITRK 103 (535)
Q Consensus 96 e~f~~~~~ 103 (535)
|.+.|.-+
T Consensus 111 e~~~iR~~ 118 (191)
T PF06229_consen 111 EMIKIRSD 118 (191)
T ss_dssp T--EEEE-
T ss_pred ceEEEEEe
Confidence 99977665
|
FSHD is a dominant neuromuscular disorder caused by deletions in a number of tandem repeat units (called D4Z4) located on chromosome 4q35. D4Z4 contains a transcriptional silencer whose deletion causes the over-expression in skeletal muscle of 4q35 genes, including Frg1 [, ]. Frg1 is localised to nucleoli and appears to be a component of the human spliceosome, but its exact function is unknown [].; PDB: 2YUG_A. |
| >PF06229 FRG1: FRG1-like family; InterPro: IPR010414 This entry represents Frg1 (FSHD region gene 1), a protein that is considered to be a candidate for facioscapulohumeral muscular dystrophy (FSHD) | Back alignment and domain information |
|---|
Probab=98.53 E-value=5.9e-07 Score=84.74 Aligned_cols=98 Identities=18% Similarity=0.246 Sum_probs=58.6
Q ss_pred EEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEe-cCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCCceEE
Q 046395 22 LISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRI-NETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEPFQI 100 (535)
Q Consensus 22 ~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e~f~~ 100 (535)
|.++.+|.|.+||.=.- . -.|++.|.|-+.++ ++++|+||..+|+|++|+. .|.|+|++++.|+.|.|++
T Consensus 4 i~a~d~G~~t~~ePhd~------~--~~p~p~qV~va~~v~~~~~iafKs~~GkYLs~Dk-~G~v~a~sdAiGp~E~f~~ 74 (191)
T PF06229_consen 4 IEALDNGLFTTGEPHDV------G--EGPDPRQVWVATRVPGDEKIAFKSGHGKYLSCDK-DGIVSARSDAIGPQEQFEP 74 (191)
T ss_dssp EEE-TTS-EEE----SS------S------TTT-EEEEE--SSS-EEEEETTS-BEEE-S-SSBEEE--SS--TTTBEEE
T ss_pred eeeeccCCccccCCCcC------C--CCCChhHeEEEEEecCCCceEeeccCccEEEEcC-CCcEEEEeecCCCceEEEE
Confidence 56677777777774221 1 23588999999999 8999999999999999998 8899999999999999999
Q ss_pred EecCCCCceeEEEe-cCCceEEEecccEEecC
Q 046395 101 TRKNGEPHRVRFRA-SNGYFLQAKSEMQVTAD 131 (535)
Q Consensus 101 ~~~~~~~~~v~I~~-~nG~flq~~~~~~v~a~ 131 (535)
|..++.. -+.. .|+.||.++...-+.++
T Consensus 75 V~~~~~~---a~~~~~~~~FLs~~~~~~i~a~ 103 (191)
T PF06229_consen 75 VFQDGKP---ALFSSSNNKFLSVDEEGDIRAD 103 (191)
T ss_dssp E-STT-----EEEE-TTS-BEEE-SSS-EEE-
T ss_pred EECCCCe---EEEecCCCeEEEEecccCeeec
Confidence 9976544 4445 99999998763334443
|
FSHD is a dominant neuromuscular disorder caused by deletions in a number of tandem repeat units (called D4Z4) located on chromosome 4q35. D4Z4 contains a transcriptional silencer whose deletion causes the over-expression in skeletal muscle of 4q35 genes, including Frg1 [, ]. Frg1 is localised to nucleoli and appears to be a component of the human spliceosome, but its exact function is unknown [].; PDB: 2YUG_A. |
| >PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D | Back alignment and domain information |
|---|
Probab=98.47 E-value=6.3e-06 Score=83.65 Aligned_cols=137 Identities=12% Similarity=0.136 Sum_probs=83.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccc-c-CCC--C--------CC-----CCccchHHHHHHHHHHHHHcCCEEEEe-cCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIA-Y-DPK--P--------PK-----PFVGGSLQALDNAFRWAQKYGMKVIVD-LHAL 244 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~-~-~p~--~--------~~-----~~~~~~l~~ld~~i~~a~~~Gi~VIld-lH~~ 244 (535)
+..++..|+.|||+||+-+.-... . .|. + +. .+++.+|+.+|++|+.|.++||.+.|- +|+.
T Consensus 33 ~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~~N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~ 112 (289)
T PF13204_consen 33 EQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTRPNPAYFDHLDRRIEKANELGIEAALVPFWGC 112 (289)
T ss_dssp HHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT----HHHHHHHHHHHHHHTT-EEEEESS-HH
T ss_pred HHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEEECC
Confidence 567889999999999997653211 1 110 0 00 145679999999999999999999654 4523
Q ss_pred CCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 046395 245 RVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 245 pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 324 (535)
+.....|. .+ .. .-..+...++++.|++||+..|+|+ |.|.||-. ....-.+.++++.+.||+.+|.
T Consensus 113 ~~~~~~Wg-~~----~~---~m~~e~~~~Y~~yv~~Ry~~~~Nvi-W~l~gd~~----~~~~~~~~w~~~~~~i~~~dp~ 179 (289)
T PF13204_consen 113 PYVPGTWG-FG----PN---IMPPENAERYGRYVVARYGAYPNVI-WILGGDYF----DTEKTRADWDAMARGIKENDPY 179 (289)
T ss_dssp HHH------------TT---SS-HHHHHHHHHHHHHHHTT-SSEE-EEEESSS------TTSSHHHHHHHHHHHHHH--S
T ss_pred cccccccc-cc----cc---CCCHHHHHHHHHHHHHHHhcCCCCE-EEecCccC----CCCcCHHHHHHHHHHHHhhCCC
Confidence 22111111 00 00 1357889999999999999999999 99999982 1223466777889999999998
Q ss_pred cEEEEcCC
Q 046395 325 AYVILSNR 332 (535)
Q Consensus 325 ~~ii~~~~ 332 (535)
.++.+++.
T Consensus 180 ~L~T~H~~ 187 (289)
T PF13204_consen 180 QLITIHPC 187 (289)
T ss_dssp S-EEEEE-
T ss_pred CcEEEeCC
Confidence 88777753
|
|
| >PF14488 DUF4434: Domain of unknown function (DUF4434) | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.9e-06 Score=76.73 Aligned_cols=134 Identities=22% Similarity=0.260 Sum_probs=95.1
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccC-----CCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYD-----PKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS 254 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~-----p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s 254 (535)
++++|+.|++.|+++|=|- |.... |... ..+....-+.|+.+++.|.++||+|+|.|...+.- ...
T Consensus 22 W~~~~~~m~~~GidtlIlq---~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~~~~~~----w~~ 94 (166)
T PF14488_consen 22 WREEFRAMKAIGIDTLILQ---WTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLYFDPDY----WDQ 94 (166)
T ss_pred HHHHHHHHHHcCCcEEEEE---EeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCCCCchh----hhc
Confidence 3899999999999999652 11111 1110 11333456899999999999999999999854321 110
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCC
Q 046395 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR 332 (535)
Q Consensus 255 g~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~ 332 (535)
+... ...+....+++++.++|+.||++.||=|-.|+... + ..-...++.+.+.++++.++.+|++++-
T Consensus 95 ----~~~~---~~~~~~~~v~~el~~~yg~h~sf~GWYip~E~~~~--~-~~~~~~~~~l~~~lk~~s~~~Pv~ISpf 162 (166)
T PF14488_consen 95 ----GDLD---WEAERNKQVADELWQRYGHHPSFYGWYIPYEIDDY--N-WNAPERFALLGKYLKQISPGKPVMISPF 162 (166)
T ss_pred ----cCHH---HHHHHHHHHHHHHHHHHcCCCCCceEEEecccCCc--c-cchHHHHHHHHHHHHHhCCCCCeEEecC
Confidence 1111 24445567889999999999999999999999853 2 2336667777888889988888888763
|
|
| >PLN03059 beta-galactosidase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.1e-05 Score=88.58 Aligned_cols=141 Identities=14% Similarity=0.152 Sum_probs=101.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-++.||++|+|+|-.-|.| .+.+|.+|. |+-.....|.++|+.|++.||+|||-.- |--...|+. .|.+.
T Consensus 62 ~d~L~k~Ka~GlNtV~tYV~W-n~HEp~~G~-~dF~G~~DL~~Fl~la~e~GLyvilRpG--PYIcAEw~~----GGlP~ 133 (840)
T PLN03059 62 PDLIQKAKDGGLDVIQTYVFW-NGHEPSPGN-YYFEDRYDLVKFIKVVQAAGLYVHLRIG--PYICAEWNF----GGFPV 133 (840)
T ss_pred HHHHHHHHHcCCCeEEEEecc-cccCCCCCe-eeccchHHHHHHHHHHHHcCCEEEecCC--cceeeeecC----CCCch
Confidence 899999999999999999986 777888876 8877889999999999999999999432 111111111 12223
Q ss_pred C------------ChHHHHHHHHHHHHHHHHhCC-------CCcEEEEEeecCCCCCCC-ChHHHHHHHHHHHHHHHhcC
Q 046395 263 W------------SDSDIQETVAIIDFLASRYAD-------HPSLVAIELMNEPKAPDL-KLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 263 W------------~~~~~~~~~~~~~~la~ry~~-------~p~V~~~el~NEP~~~~~-~~~~~~~~~~~~~~aIR~~~ 322 (535)
| ++.+.+...+++++|+.+.+. -..||+.+|-||-..... ....-+.|++.+.+..++.+
T Consensus 134 WL~~~~~i~~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPIImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~~G 213 (840)
T PLN03059 134 WLKYVPGIEFRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPIILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLG 213 (840)
T ss_pred hhhcCCCcccccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcEEEEEecccccceecccCcchHHHHHHHHHHHHHcC
Confidence 3 156777888888888877642 236889999999764210 00122678888888888888
Q ss_pred CCcEEEEcC
Q 046395 323 SSAYVILSN 331 (535)
Q Consensus 323 p~~~ii~~~ 331 (535)
-..+++.++
T Consensus 214 i~VPl~t~d 222 (840)
T PLN03059 214 TGVPWVMCK 222 (840)
T ss_pred CCcceEECC
Confidence 888777765
|
|
| >PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=98.05 E-value=6.1e-05 Score=77.62 Aligned_cols=226 Identities=15% Similarity=0.244 Sum_probs=132.8
Q ss_pred HHHHHHHcCCCEEEeCCc-cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCC-CCCCCCCCCCCCCCCC
Q 046395 185 DFKFMSQNGLNAVRIPVG-WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHA-LRVSQNGSPHSGSRDG 259 (535)
Q Consensus 185 D~~~ik~~G~N~VRipv~-~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~-~pg~~ng~~~sg~~~~ 259 (535)
....+-..-||.+-..-. -|...+|.+|. | .++..|+++++|+++||.|- |-+|. .|. |...
T Consensus 26 ~~~~~~~~~Fn~~t~eN~~Kw~~~e~~~g~-~---~~~~~D~~~~~a~~~g~~vrGH~LvW~~~~P~----w~~~----- 92 (320)
T PF00331_consen 26 RYRELFAKHFNSVTPENEMKWGSIEPEPGR-F---NFESADAILDWARENGIKVRGHTLVWHSQTPD----WVFN----- 92 (320)
T ss_dssp HHHHHHHHH-SEEEESSTTSHHHHESBTTB-E---E-HHHHHHHHHHHHTT-EEEEEEEEESSSS-H----HHHT-----
T ss_pred HHHHHHHHhCCeeeeccccchhhhcCCCCc-c---CccchhHHHHHHHhcCcceeeeeEEEcccccc----eeee-----
Confidence 455555566777776421 24566776664 5 78999999999999999986 55564 121 1000
Q ss_pred CCCCCh----HHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC-----ChHHH-----HHHHHHHHHHHHhcCCCc
Q 046395 260 FQEWSD----SDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL-----KLDSL-----KTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 260 ~~~W~~----~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~-----~~~~~-----~~~~~~~~~aIR~~~p~~ 325 (535)
...+.+ ...+...++++.+++||++...|.+|+++|||..... ....| ..|+..+++..|+.+|+.
T Consensus 93 ~~~~~~~~~~~~~~~l~~~I~~v~~~y~~~g~i~~WDVvNE~i~~~~~~~~~r~~~~~~~lG~~yi~~aF~~A~~~~P~a 172 (320)
T PF00331_consen 93 LANGSPDEKEELRARLENHIKTVVTRYKDKGRIYAWDVVNEAIDDDGNPGGLRDSPWYDALGPDYIADAFRAAREADPNA 172 (320)
T ss_dssp STTSSBHHHHHHHHHHHHHHHHHHHHTTTTTTESEEEEEES-B-TTSSSSSBCTSHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred ccCCCcccHHHHHHHHHHHHHHHHhHhccccceEEEEEeeecccCCCccccccCChhhhcccHhHHHHHHHHHHHhCCCc
Confidence 011221 2567788999999999998778999999999997432 01112 258899999999999999
Q ss_pred EEEEcCCCC--CCh---------hhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCc
Q 046395 326 YVILSNRLG--GEW---------SELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPL 394 (535)
Q Consensus 326 ~ii~~~~~g--~~~---------~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~ 394 (535)
.+++-+ |+ ... ..+..-..+-+.+-+..|+-.... .+.+. ..|..+... |.+
T Consensus 173 ~L~~ND-y~~~~~~k~~~~~~lv~~l~~~gvpIdgIG~Q~H~~~~~~-----------~~~i~----~~l~~~~~~-Gl~ 235 (320)
T PF00331_consen 173 KLFYND-YNIESPAKRDAYLNLVKDLKARGVPIDGIGLQSHFDAGYP-----------PEQIW----NALDRFASL-GLP 235 (320)
T ss_dssp EEEEEE-SSTTSTHHHHHHHHHHHHHHHTTHCS-EEEEEEEEETTSS-----------HHHHH----HHHHHHHTT-TSE
T ss_pred EEEecc-ccccchHHHHHHHHHHHHHHhCCCccceechhhccCCCCC-----------HHHHH----HHHHHHHHc-CCc
Confidence 888843 32 110 111111234577889999875421 22222 234445433 567
Q ss_pred EEEeccCCCcCCCCC---CHHHHHHHHHHHHHHHhhCC----cceEEEeeeeC
Q 046395 395 SFVGEWSCEWEAEGA---SKRDYQRFAEAQLDVYGRAT----FGWAYWAYKFA 440 (535)
Q Consensus 395 v~vGEfg~~~~~~~~---~~~~~~~~~~~ql~~~~~~~----~Gw~~W~~k~~ 440 (535)
+.|+|+-........ ......++++..++.+-+.. -|-++|.+...
T Consensus 236 i~ITElDv~~~~~~~~~~~~~~qA~~~~~~~~~~~~~~~~~v~git~Wg~~D~ 288 (320)
T PF00331_consen 236 IHITELDVRDDDNPPDAEEEEAQAEYYRDFLTACFSHPPAAVEGITWWGFTDG 288 (320)
T ss_dssp EEEEEEEEESSSTTSCHHHHHHHHHHHHHHHHHHHHTTHCTEEEEEESSSBTT
T ss_pred eEEEeeeecCCCCCcchHHHHHHHHHHHHHHHHHHhCCccCCCEEEEECCCCC
Confidence 999999654322111 01122234444455554433 47888887664
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B .... |
| >COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.00 E-value=4.1e-05 Score=87.09 Aligned_cols=110 Identities=22% Similarity=0.282 Sum_probs=78.7
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
.++|++.||++|+|+||.. ++ |+ . ....++|.++||+||-+....- | +.. ..
T Consensus 323 ~~~dl~lmk~~n~N~vRts-Hy-----P~--~----------~~~ydLcDelGllV~~Ea~~~~-------~-~~~-~~- 374 (808)
T COG3250 323 MERDLKLMKEANMNSVRTS-HY-----PN--S----------EEFYDLCDELGLLVIDEAMIET-------H-GMP-DD- 374 (808)
T ss_pred HHHHHHHHHHcCCCEEEec-CC-----CC--C----------HHHHHHHHHhCcEEEEecchhh-------c-CCC-CC-
Confidence 4789999999999999995 22 21 1 2367999999999999885320 0 000 11
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 262 EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
++..+....-+++|.+|-++||+|+.|.+.||+..+. . ...++..+++.++...+...
T Consensus 375 ---~~~~k~~~~~i~~mver~knHPSIiiWs~gNE~~~g~-~-------~~~~~~~~k~~d~~r~~~~~ 432 (808)
T COG3250 375 ---PEWRKEVSEEVRRMVERDRNHPSIIIWSLGNESGHGS-N-------HWALYRWFKASDPTRPVQYE 432 (808)
T ss_pred ---cchhHHHHHHHHHHHHhccCCCcEEEEeccccccCcc-c-------cHHHHHHHhhcCCccceecc
Confidence 3567788888999999999999999999999987521 1 22345566667776665554
|
|
| >COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0036 Score=62.90 Aligned_cols=169 Identities=21% Similarity=0.287 Sum_probs=103.8
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCC---CCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHH
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALR---VSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLA 279 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~p---g~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la 279 (535)
|..++|.+|. | .|+.-|.+++-|++|||.+ |..+ .+|...+.++. .++ +...+...+.+..++
T Consensus 69 we~i~p~~G~-f---~Fe~AD~ia~FAr~h~m~l----hGHtLvW~~q~P~W~~~~-----e~~~~~~~~~~e~hI~tV~ 135 (345)
T COG3693 69 WEAIEPERGR-F---NFEAADAIANFARKHNMPL----HGHTLVWHSQVPDWLFGD-----ELSKEALAKMVEEHIKTVV 135 (345)
T ss_pred cccccCCCCc-c---CccchHHHHHHHHHcCCee----ccceeeecccCCchhhcc-----ccChHHHHHHHHHHHHHHH
Confidence 3455665553 5 6788999999999999986 4321 11222111110 122 456778889999999
Q ss_pred HHhCCCCcEEEEEeecCCCCCCCC--hHHH------HHHHHHHHHHHHhcCCCcEEEEcCCCC--CCh----------hh
Q 046395 280 SRYADHPSLVAIELMNEPKAPDLK--LDSL------KTYYKAGYDTVRKYSSSAYVILSNRLG--GEW----------SE 339 (535)
Q Consensus 280 ~ry~~~p~V~~~el~NEP~~~~~~--~~~~------~~~~~~~~~aIR~~~p~~~ii~~~~~g--~~~----------~~ 339 (535)
.||++ .|+.|++.|||...... ...| -+|++.++...|+.+|+..+++-+ |+ .+. ..
T Consensus 136 ~rYkg--~~~sWDVVNE~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~~ND-Y~ie~~~~kr~~~~nlI~~ 212 (345)
T COG3693 136 GRYKG--SVASWDVVNEAVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLVIND-YSIEGNPAKRNYVLNLIEE 212 (345)
T ss_pred HhccC--ceeEEEecccccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEEeec-ccccCChHHHHHHHHHHHH
Confidence 99999 59999999999863111 1122 247888999999999999877743 32 111 22
Q ss_pred hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCC
Q 046395 340 LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCE 403 (535)
Q Consensus 340 ~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~ 403 (535)
+..-..+-+.+-+..|+=..+ . +. +..+ ..+....+. |-+++|+|.-..
T Consensus 213 LkekG~pIDgiG~QsH~~~~~----~--~~----~~~~----~a~~~~~k~-Gl~i~VTELD~~ 261 (345)
T COG3693 213 LKEKGAPIDGIGIQSHFSGDG----P--SI----EKMR----AALLKFSKL-GLPIYVTELDMS 261 (345)
T ss_pred HHHCCCCccceeeeeeecCCC----C--CH----HHHH----HHHHHHhhc-CCCceEEEeeee
Confidence 222224457788899933221 1 11 1111 124444455 666999999554
|
|
| >COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0061 Score=59.61 Aligned_cols=212 Identities=13% Similarity=0.158 Sum_probs=132.0
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
+.||+.|+..+. .||+ |- ..-..|..+..++.+.|++|+|-+.-.+..+
T Consensus 66 ~sDLe~l~~~t~-~IR~---------------Y~-sDCn~le~v~pAa~~~g~kv~lGiw~tdd~~-------------- 114 (305)
T COG5309 66 ASDLELLASYTH-SIRT---------------YG-SDCNTLENVLPAAEASGFKVFLGIWPTDDIH-------------- 114 (305)
T ss_pred HhHHHHhccCCc-eEEE---------------ee-ccchhhhhhHHHHHhcCceEEEEEeeccchh--------------
Confidence 689999999998 9998 21 1345678889999999999999776432111
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-CCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCC--CChhh
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-DLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG--GEWSE 339 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g--~~~~~ 339 (535)
...+. ..+..+ .-|..-+.|..+-+-||-... ..+..++.+++.++-.++.+.+-+..|...+.|- -+-.+
T Consensus 115 ---~~~~~--til~ay-~~~~~~d~v~~v~VGnEal~r~~~tasql~~~I~~vrsav~~agy~gpV~T~dsw~~~~~np~ 188 (305)
T COG5309 115 ---DAVEK--TILSAY-LPYNGWDDVTTVTVGNEALNRNDLTASQLIEYIDDVRSAVKEAGYDGPVTTVDSWNVVINNPE 188 (305)
T ss_pred ---hhHHH--HHHHHH-hccCCCCceEEEEechhhhhcCCCCHHHHHHHHHHHHHHHHhcCCCCceeecccceeeeCChH
Confidence 11121 222222 235667889999999998754 5678899999999999999888777766655552 11122
Q ss_pred hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcC-----CCCCCHHHH
Q 046395 340 LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWE-----AEGASKRDY 414 (535)
Q Consensus 340 ~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~-----~~~~~~~~~ 414 (535)
+.. ..+-++.-.|.|- ...+..+....+.....+.++... ....+++|+|-|=..+ ..-.+.++-
T Consensus 189 l~~---~SDfia~N~~aYw------d~~~~a~~~~~f~~~q~e~vqsa~-g~~k~~~v~EtGWPS~G~~~G~a~pS~anq 258 (305)
T COG5309 189 LCQ---ASDFIAANAHAYW------DGQTVANAAGTFLLEQLERVQSAC-GTKKTVWVTETGWPSDGRTYGSAVPSVANQ 258 (305)
T ss_pred Hhh---hhhhhhcccchhc------cccchhhhhhHHHHHHHHHHHHhc-CCCccEEEeeccCCCCCCccCCcCCChhHH
Confidence 222 2355677788882 233343333333222222233332 2225699999984322 222456667
Q ss_pred HHHHHHHHHHHhhCCcceEEEe-eeeCC
Q 046395 415 QRFAEAQLDVYGRATFGWAYWA-YKFAE 441 (535)
Q Consensus 415 ~~~~~~ql~~~~~~~~Gw~~W~-~k~~~ 441 (535)
..++++.+..+...++.-++-. |+..|
T Consensus 259 ~~~~~~i~~~~~~~G~d~fvfeAFdd~W 286 (305)
T COG5309 259 KIAVQEILNALRSCGYDVFVFEAFDDDW 286 (305)
T ss_pred HHHHHHHHhhhhccCccEEEeeeccccc
Confidence 7888888888877777665443 44444
|
|
| >PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0021 Score=57.53 Aligned_cols=105 Identities=19% Similarity=0.301 Sum_probs=66.8
Q ss_pred CCCceeEEEEeecCcEEEEec-CCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecC------CCeEEE
Q 046395 15 LDGTQVQLISTKLKKYLTAEN-GSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQ------GNKLVA 87 (535)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~a~~-~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~------~~~~~a 87 (535)
-||.-|.|+| ..||||+|+- |-+-.+--+|.+. -.-|.- +++.-+...+.||..-|.|+++.+. .|.-+.
T Consensus 5 ~d~~~VRLRS-~~~kYL~ADeDg~~Vs~~~~~~s~-na~W~V-e~v~~~~~~v~L~saYGrYL~as~~~~~lG~~G~~v~ 81 (142)
T PF04601_consen 5 PDGKHVRLRS-HHGKYLHADEDGEGVSQDRRGASL-NAAWTV-ERVPGSPNYVRLRSAYGRYLAASDEPALLGHTGRRVV 81 (142)
T ss_pred CCCCEEEEEe-cCCCEEEEcCCCCeEEECCCCCCC-cceEEE-EEecCCCCEEEEeeccCceEeccCCcCCCCCCCCEEE
Confidence 4799999999 9999999985 4444444444433 123322 2222224678899889999999764 122333
Q ss_pred ecc--CCCCCCceEEEecCCCCceeEEEecCCceEEEecc
Q 046395 88 VSA--TEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKSE 125 (535)
Q Consensus 88 ~~~--~~~~~e~f~~~~~~~~~~~v~I~~~nG~flq~~~~ 125 (535)
+.. .+...-.|+-+|. ...|.++..+|.||.++++
T Consensus 82 Q~~~~~~d~~~~Wepvr~---g~~V~Lr~~~gr~LRANG~ 118 (142)
T PF04601_consen 82 QTDPDRLDSSVEWEPVRD---GFYVKLRHRSGRYLRANGG 118 (142)
T ss_pred ecCCccCCCCceEEEecC---CCEEEEEecCCceEEcCCC
Confidence 322 2222334555564 2479999999999999876
|
Some family members contain two copies of the region. |
| >PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.019 Score=59.80 Aligned_cols=105 Identities=15% Similarity=0.173 Sum_probs=61.6
Q ss_pred HHHHHHHHcCCEEEEecCCC-CCC--CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC
Q 046395 225 NAFRWAQKYGMKVIVDLHAL-RVS--QNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP 300 (535)
Q Consensus 225 ~~i~~a~~~Gi~VIldlH~~-pg~--~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~ 300 (535)
.+++.|+++|+..++-+-.- |.- .||....+ ..+...-.+...+.|..|+..++++|+.+. .|-.++.+|||...
T Consensus 108 wfL~~Ak~rGV~~f~aFSNSPP~~MT~NG~~~g~-~~~~~NLk~d~y~~FA~YLa~Vv~~~~~~GI~f~~IsP~NEP~~~ 186 (384)
T PF14587_consen 108 WFLKAAKERGVNIFEAFSNSPPWWMTKNGSASGG-DDGSDNLKPDNYDAFADYLADVVKHYKKWGINFDYISPFNEPQWN 186 (384)
T ss_dssp HHHHHHHHTT---EEEE-SSS-GGGSSSSSSB-S--SSS-SS-TT-HHHHHHHHHHHHHHHHCTT--EEEEE--S-TTS-
T ss_pred HHHHHHHHcCCCeEEEeecCCCHHHhcCCCCCCC-CccccccChhHHHHHHHHHHHHHHHHHhcCCccceeCCcCCCCCC
Confidence 37799999999988866543 331 22222111 111111125788999999999999995543 57778999999863
Q ss_pred ---------CCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 301 ---------DLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 301 ---------~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
..+......+++.+..++++.+.+..|+++
T Consensus 187 W~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~ 225 (384)
T PF14587_consen 187 WAGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISAC 225 (384)
T ss_dssp GG--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEE
T ss_pred CCCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEec
Confidence 124567888999999999999988877775
|
|
| >PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.00047 Score=73.70 Aligned_cols=40 Identities=28% Similarity=0.585 Sum_probs=36.1
Q ss_pred cCCCCcccHHHHHhhCCCCCC-----------CCceEEEecCCccCCccccC
Q 046395 487 PAYPTVMHVNQIRGILPSRVR-----------SKREDGIKNLKEFGDDYYRP 527 (535)
Q Consensus 487 ~~~~~~~~~~~i~~~lphr~p-----------~~~~~~~k~v~~~~~~~f~~ 527 (535)
+..+++|+.++|+++||||+| +.++++.|+|+ .||+||+|
T Consensus 315 ~~~~~~m~~~~I~~lLPHR~PmLLVDrIl~~e~~~i~a~k~Vs-~De~ff~G 365 (464)
T PRK13188 315 PNKEPILDINRIMKILPHRYPFLLVDKIIELGDTKIVGIKNVT-MNEPFFQG 365 (464)
T ss_pred CCCCCccCHHHHHHhCCCCCCeEEEEEEeEEeCCEEEEEEEcC-CCcHHhhc
Confidence 445667899999999999999 77899999999 99999997
|
|
| >TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.18 Score=58.51 Aligned_cols=102 Identities=16% Similarity=0.230 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEec---CCCCCCCC---CCC-------C----CCCCCCCCCC------ChHHHHHHHHHHH
Q 046395 220 LQALDNAFRWAQKYGMKVIVDL---HALRVSQN---GSP-------H----SGSRDGFQEW------SDSDIQETVAIID 276 (535)
Q Consensus 220 l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~n---g~~-------~----sg~~~~~~~W------~~~~~~~~~~~~~ 276 (535)
+..++++|+.|.++||+||+|+ |...++.. .++ + .|.......+ .+..++..++.++
T Consensus 403 i~Efk~mV~alH~~Gi~VIlDVVyNHt~~~g~~~~s~ld~~~P~YY~r~~~~G~~~n~~~~~d~a~e~~~Vrk~iiDsl~ 482 (898)
T TIGR02103 403 IKEFREMVQALNKTGLNVVMDVVYNHTNASGPNDRSVLDKIVPGYYHRLNEDGGVENSTCCSNTATEHRMMAKLIVDSLV 482 (898)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeecccccccCccCcccccccCcHhhEeeCCCCCeecCCCCcCCCCCCHHHHHHHHHHHH
Confidence 5789999999999999999999 54432211 000 0 0100000001 1556677778888
Q ss_pred HHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCC
Q 046395 277 FLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333 (535)
Q Consensus 277 ~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~ 333 (535)
..++.|+=+ .. -++++..-. ..+++++.+++|+++|+.+ +++-.|
T Consensus 483 ~W~~ey~VD-GF-RfDlm~~~~---------~~f~~~~~~~l~~i~pdi~-l~GEgW 527 (898)
T TIGR02103 483 VWAKDYKVD-GF-RFDLMGHHP---------KAQMLAAREAIKALTPEIY-FYGEGW 527 (898)
T ss_pred HHHHHcCCC-EE-EEechhhCC---------HHHHHHHHHHHHHhCCCEE-EEecCC
Confidence 888878542 23 377776543 4577788888999999866 455455
|
Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102). |
| >PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.12 Score=56.31 Aligned_cols=231 Identities=17% Similarity=0.187 Sum_probs=115.3
Q ss_pred HcCCCEEEeCCccccccC------CCCC----CCCc--cchHHHHHHHHHHHHHc--CCEEEEecCCCCCCCC--CC-CC
Q 046395 191 QNGLNAVRIPVGWWIAYD------PKPP----KPFV--GGSLQALDNAFRWAQKY--GMKVIVDLHALRVSQN--GS-PH 253 (535)
Q Consensus 191 ~~G~N~VRipv~~w~~~~------p~~~----~~~~--~~~l~~ld~~i~~a~~~--Gi~VIldlH~~pg~~n--g~-~~ 253 (535)
-+|++.+|+||+-=.+.. ..++ ..|. .+..+.+-.+|+.|.+. +|+++-.--.+|+-.. +. ..
T Consensus 111 G~g~s~~R~pIgssDfs~~~Yty~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~~~~lki~aSpWSpP~WMKtn~~~~g 190 (496)
T PF02055_consen 111 GIGYSLLRVPIGSSDFSTRPYTYDDVPGDFNLSNFSIAREDKKYKIPLIKEALAINPNLKIFASPWSPPAWMKTNGSMNG 190 (496)
T ss_dssp TT---EEEEEES--SSSSS---ST-STTHTTTTT---HHHHHTTHHHHHHHHHHHHTT-EEEEEES---GGGBTTSSSCS
T ss_pred CceEEEEEeeccCcCCcCCcccccCCCCCCccccCCccccchhhHHHHHHHHHHhCCCcEEEEecCCCCHHHccCCcCcC
Confidence 489999999997522211 1111 0111 11111112344544433 5899888888876331 11 11
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC----------CCChHHHHHHHHH-HHHHHHhc
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP----------DLKLDSLKTYYKA-GYDTVRKY 321 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~----------~~~~~~~~~~~~~-~~~aIR~~ 321 (535)
.|...+.. .+++.+.+.+++.+..+.|+.+. .|-++-+-|||... ..+++..+.|.+. +..++++.
T Consensus 191 ~g~l~g~~--~~~y~~~yA~Y~vkfi~aY~~~GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~~~Fi~~~LgP~l~~~ 268 (496)
T PF02055_consen 191 GGSLKGSL--GDEYYQAYADYFVKFIQAYKKEGIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQADFIKNYLGPALRKA 268 (496)
T ss_dssp S-BBSCGT--TSHHHHHHHHHHHHHHHHHHCTT--ESEEESSSSCCGGGSTT-SSC--B--HHHHHHHHHHTHHHHHHTS
T ss_pred CCccCCCC--CchhHHHHHHHHHHHHHHHHHCCCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 12111211 13677788888888888888765 67888999999841 1245778889876 77899998
Q ss_pred CC--CcEEEE-cCCC-C-CCh-hhhhccc-CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCc
Q 046395 322 SS--SAYVIL-SNRL-G-GEW-SELLSFA-SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPL 394 (535)
Q Consensus 322 ~p--~~~ii~-~~~~-g-~~~-~~~~~~~-~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~ 394 (535)
++ +..|++ .+.+ . .++ ..++..+ ...--..+.+|.|.... ....++.+... .-...
T Consensus 269 ~~g~d~kI~~~D~n~~~~~~~~~~il~d~~A~~yv~GiA~HwY~g~~-------~~~~l~~~h~~----------~P~k~ 331 (496)
T PF02055_consen 269 GLGKDVKILIYDHNRDNLPDYADTILNDPEAAKYVDGIAFHWYGGDP-------SPQALDQVHNK----------FPDKF 331 (496)
T ss_dssp TT-TTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTEEEEEEEETTCS--------HCHHHHHHHHH----------STTSE
T ss_pred CCCCceEEEEEecCCcccchhhhhhhcChhhHhheeEEEEECCCCCc-------hhhHHHHHHHH----------CCCcE
Confidence 76 555544 3322 1 111 2233221 22235679999996411 11122222211 11234
Q ss_pred EEEeccCCC-cCC----CCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 395 SFVGEWSCE-WEA----EGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 395 v~vGEfg~~-~~~----~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
++.+|-+.. +.. .....+.-.+|....+..+.....||+.|.+--+
T Consensus 332 l~~TE~~~g~~~~~~~~~~g~w~~~~~y~~~ii~~lnn~~~gw~~WNl~LD 382 (496)
T PF02055_consen 332 LLFTEACCGSWNWDTSVDLGSWDRAERYAHDIIGDLNNWVSGWIDWNLALD 382 (496)
T ss_dssp EEEEEEESS-STTS-SS-TTHHHHHHHHHHHHHHHHHTTEEEEEEEESEBE
T ss_pred EEeeccccCCCCcccccccccHHHHHHHHHHHHHHHHhhceeeeeeeeecC
Confidence 788887542 211 1111222345566666666655579999997543
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A .... |
| >PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.032 Score=55.05 Aligned_cols=134 Identities=18% Similarity=0.260 Sum_probs=78.4
Q ss_pred HHHHHHHHHhCCCCcEEEEEeecCCCCCC---CChHHHHHHHHHHHHHHHhcCCCcEEEEcCCC--C-------CC-hhh
Q 046395 273 AIIDFLASRYADHPSLVAIELMNEPKAPD---LKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL--G-------GE-WSE 339 (535)
Q Consensus 273 ~~~~~la~ry~~~p~V~~~el~NEP~~~~---~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~--g-------~~-~~~ 339 (535)
..++.+.+. ++.+-.+..+|||.... .+++.....+++.++.+|. +... ++++.. . .+ +..
T Consensus 54 ~~~~~v~~~---~~~~~~ll~fNEPD~~~qsn~~p~~aa~~w~~~~~~~~~--~~~~-l~sPa~~~~~~~~~~g~~Wl~~ 127 (239)
T PF11790_consen 54 DWLANVQNA---HPGSKHLLGFNEPDLPGQSNMSPEEAAALWKQYMNPLRS--PGVK-LGSPAVAFTNGGTPGGLDWLSQ 127 (239)
T ss_pred HHHHHHHhh---ccCccceeeecCCCCCCCCCCCHHHHHHHHHHHHhHhhc--CCcE-EECCeecccCCCCCCccHHHHH
Confidence 344444444 33455567899999753 4566777777777777774 3333 233211 1 11 234
Q ss_pred hhcccC-CCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHH
Q 046395 340 LLSFAS-NLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFA 418 (535)
Q Consensus 340 ~~~~~~-~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~ 418 (535)
++.... +..-.++++|.|.. +.+...+. +..+.+..+.||+|+|||+.......+.+.-..|+
T Consensus 128 F~~~~~~~~~~D~iavH~Y~~--------~~~~~~~~--------i~~~~~~~~kPIWITEf~~~~~~~~~~~~~~~~fl 191 (239)
T PF11790_consen 128 FLSACARGCRVDFIAVHWYGG--------DADDFKDY--------IDDLHNRYGKPIWITEFGCWNGGSQGSDEQQASFL 191 (239)
T ss_pred HHHhcccCCCccEEEEecCCc--------CHHHHHHH--------HHHHHHHhCCCEEEEeecccCCCCCCCHHHHHHHH
Confidence 443323 45778999999922 12222222 22232233467999999976544445667778899
Q ss_pred HHHHHHHhhC
Q 046395 419 EAQLDVYGRA 428 (535)
Q Consensus 419 ~~ql~~~~~~ 428 (535)
+..+..+++.
T Consensus 192 ~~~~~~ld~~ 201 (239)
T PF11790_consen 192 RQALPWLDSQ 201 (239)
T ss_pred HHHHHHHhcC
Confidence 8888888754
|
|
| >PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.00096 Score=60.60 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=33.3
Q ss_pred CcccHHHHHhhCCCCCC------------CCceEEEecCCccCCccccCC
Q 046395 491 TVMHVNQIRGILPSRVR------------SKREDGIKNLKEFGDDYYRPS 528 (535)
Q Consensus 491 ~~~~~~~i~~~lphr~p------------~~~~~~~k~v~~~~~~~f~~~ 528 (535)
..|+..+|.++||||+| +.++++.|+|+ .|++||+|-
T Consensus 5 ~~~~~~~i~~~lPhr~p~l~vD~i~~~~~~~~~~~~~~v~-~d~~~~~gh 53 (147)
T PRK00006 5 MMLDIEEILKLLPHRYPFLLVDRVLELEPGKSIVAIKNVT-INEPFFQGH 53 (147)
T ss_pred cccCHHHHHHhCCCCCCeeeEEEEEEEcCCCEEEEEEEec-CCCccccCC
Confidence 36789999999999999 57899999999 999999963
|
|
| >PF13200 DUF4015: Putative glycosyl hydrolase domain | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.29 Score=50.12 Aligned_cols=247 Identities=16% Similarity=0.309 Sum_probs=122.9
Q ss_pred HHHHHHHHHcCCCEEEeCCccc---cccCCC-CCCC-C--ccchHHHHHHHHHHHHHcCCEEEEecCCCCC---------
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWW---IAYDPK-PPKP-F--VGGSLQALDNAFRWAQKYGMKVIVDLHALRV--------- 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w---~~~~p~-~~~~-~--~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg--------- 246 (535)
++-+++|++-|+|+|=|-|-=. ...... +... . .......++.+++.|+++|||+|-=+..+..
T Consensus 16 ~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~FkD~~la~~~pe 95 (316)
T PF13200_consen 16 DKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFKDPVLAEAHPE 95 (316)
T ss_pred HHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEecChHHhhhChh
Confidence 6889999999999999866310 000000 0000 0 1123467899999999999999965543210
Q ss_pred ----CCCCCCCCCCCCCCCCCC----hHHHHHHHHHHHHHHHH--------hCCCCc--EEEEEeecCCCCCCCChHHHH
Q 046395 247 ----SQNGSPHSGSRDGFQEWS----DSDIQETVAIIDFLASR--------YADHPS--LVAIELMNEPKAPDLKLDSLK 308 (535)
Q Consensus 247 ----~~ng~~~sg~~~~~~~W~----~~~~~~~~~~~~~la~r--------y~~~p~--V~~~el~NEP~~~~~~~~~~~ 308 (535)
..+|..+.. .....|- ++.++..+++.+++|+. |-..|. ...--.+.++.......+.+.
T Consensus 96 ~av~~~~G~~w~d--~~~~~WvnP~~~evw~Y~i~IA~Eaa~~GFdEIqfDYIRFP~~~~~~~l~y~~~~~~~~r~~aI~ 173 (316)
T PF13200_consen 96 WAVKTKDGSVWRD--NEGEAWVNPYSKEVWDYNIDIAKEAAKLGFDEIQFDYIRFPDEGRLSGLDYSENDTEESRVDAIT 173 (316)
T ss_pred hEEECCCCCcccC--CCCCccCCCCCHHHHHHHHHHHHHHHHcCCCEEEeeeeecCCCCcccccccCCCCCcchHHHHHH
Confidence 001110000 0112343 66777777888887763 111222 000001222222112457899
Q ss_pred HHHHHHHHHHHhcCCCcEEEE-c--------CCCCCChhhhhcccCCCCcEEEEEeecCcCC-Cc-ccCCChhhh-HHHH
Q 046395 309 TYYKAGYDTVRKYSSSAYVIL-S--------NRLGGEWSELLSFASNLSRVVIDVHFYNLFW-DN-FNKMSVQQN-IDYI 376 (535)
Q Consensus 309 ~~~~~~~~aIR~~~p~~~ii~-~--------~~~g~~~~~~~~~~~~~~n~v~d~H~Y~~~~-~~-~~~~~~~~~-i~~i 376 (535)
.|++.+.+.+++.+...-+-+ + ...|+++..+... -.+++.=.|+... .+ |.-..++.+ .+.+
T Consensus 174 ~Fl~~a~~~l~~~~v~vSaDVfG~~~~~~~~~~iGQ~~~~~a~~-----vD~IsPMiYPSh~~~g~~g~~~P~~~PY~~v 248 (316)
T PF13200_consen 174 DFLAYAREELHPYGVPVSADVFGYVAWSPDDMGIGQDFEKIAEY-----VDYISPMIYPSHYGPGFFGIDKPDLEPYEIV 248 (316)
T ss_pred HHHHHHHHHHhHcCCCEEEEecccccccCCCCCcCCCHHHHhhh-----CCEEEecccccccCcccCCCCCcccChHHHH
Confidence 999999999998865432211 1 1234666655433 3445555554321 11 111111111 2222
Q ss_pred HHhhhHHHHHHhhcCCCcE---EEeccCCCcCCCCCCHHHH-HHHHHHHHHHHhhCC-cceEEEeee
Q 046395 377 YRQRSSDLRNVTTSDGPLS---FVGEWSCEWEAEGASKRDY-QRFAEAQLDVYGRAT-FGWAYWAYK 438 (535)
Q Consensus 377 ~~~~~~~l~~~~~~~~p~v---~vGEfg~~~~~~~~~~~~~-~~~~~~ql~~~~~~~-~Gw~~W~~k 438 (535)
..........+.....+++ ++--|...|... ....| ...+++|++.....+ -||++|.-.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~RPWlQ~Ft~~~~~~--~~~~Yg~~ev~aQI~A~~d~g~~~~llWna~ 313 (316)
T PF13200_consen 249 YRSLKRAKERLRGLEGPAIIRPWLQDFTASWLGK--NYKEYGPEEVRAQIQALKDAGIEGWLLWNAS 313 (316)
T ss_pred HHHHHHHHHHhhcCCCCCeEeccccccccccccc--CccccCHHHHHHHHHHHHHcCCCeEEEECCC
Confidence 2222221122221111222 566666655322 12233 456888888887755 499999743
|
|
| >KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.019 Score=62.93 Aligned_cols=108 Identities=18% Similarity=0.220 Sum_probs=75.8
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-++.+|+.|+|+|-..|.| ...+|.+++ |+-...-.|.+.|..|++.|++|+|-+- |--+..|++. |.+.
T Consensus 52 ~~~i~k~k~~Gln~IqtYVfW-n~Hep~~g~-y~FsG~~DlvkFikl~~~~GLyv~LRiG--PyIcaEw~~G----G~P~ 123 (649)
T KOG0496|consen 52 PDLIKKAKAGGLNVIQTYVFW-NLHEPSPGK-YDFSGRYDLVKFIKLIHKAGLYVILRIG--PYICAEWNFG----GLPW 123 (649)
T ss_pred HHHHHHHHhcCCceeeeeeec-ccccCCCCc-ccccchhHHHHHHHHHHHCCeEEEecCC--CeEEecccCC----Ccch
Confidence 899999999999999999987 677888887 6655556666779999999999999654 2222223222 2222
Q ss_pred CC------------hHHHHHHHHHHHHHHHH----h-CCCCcEEEEEeecCCC
Q 046395 263 WS------------DSDIQETVAIIDFLASR----Y-ADHPSLVAIELMNEPK 298 (535)
Q Consensus 263 W~------------~~~~~~~~~~~~~la~r----y-~~~p~V~~~el~NEP~ 298 (535)
|. +.+..+..++++.|..+ | ++-.-||.-++-||-.
T Consensus 124 wL~~~pg~~~Rt~nepfk~~~~~~~~~iv~~mk~L~~~qGGPIIl~QIENEYG 176 (649)
T KOG0496|consen 124 WLRNVPGIVFRTDNEPFKAEMERWTTKIVPMMKKLFASQGGPIILVQIENEYG 176 (649)
T ss_pred hhhhCCceEEecCChHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEeechhh
Confidence 21 44566666677666663 2 3333577799999976
|
|
| >PF05089 NAGLU: Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; InterPro: IPR024733 Alpha-N-acetylglucosaminidase is a lysosomal enzyme that is required for the stepwise degradation of heparan sulphate [] | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0054 Score=62.50 Aligned_cols=146 Identities=17% Similarity=0.230 Sum_probs=80.9
Q ss_pred HHHHHHHHHcCCCEEEeCCcccccc-------------------CCC------------CCCC----CccchHHHHHHHH
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAY-------------------DPK------------PPKP----FVGGSLQALDNAF 227 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~-------------------~p~------------~~~~----~~~~~l~~ld~~i 227 (535)
|++|+.|+=.|+|..=.+++-+... .|. =++| +.+...+.=++++
T Consensus 22 EreIDWMALnGiNl~La~~GqEavw~~v~~~~G~t~~ei~~ff~GPA~laW~rMgNl~gwgGPLp~~w~~~q~~Lq~kIl 101 (333)
T PF05089_consen 22 EREIDWMALNGINLPLAIVGQEAVWQRVLRELGLTDEEIREFFTGPAFLAWWRMGNLQGWGGPLPQSWIDQQAELQKKIL 101 (333)
T ss_dssp HHHHHHHHHTT--EEE--TTHHHHHHHHHGGGT--HHHHHHHS--TT-HHHHHTTS--STT----TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhhhhhHHHHHHHHHHHHcCCCHHHHHHHcCCHHHHHHHHhCCcccCCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999998877532110 010 0112 3344566678899
Q ss_pred HHHHHcCCEEEEecCC--CCCCC---CCCC---CCCCCCCC--CCC----ChHHHHHHHHHHHHHHHHhCCCCcEEEEEe
Q 046395 228 RWAQKYGMKVIVDLHA--LRVSQ---NGSP---HSGSRDGF--QEW----SDSDIQETVAIIDFLASRYADHPSLVAIEL 293 (535)
Q Consensus 228 ~~a~~~Gi~VIldlH~--~pg~~---ng~~---~sg~~~~~--~~W----~~~~~~~~~~~~~~la~ry~~~p~V~~~el 293 (535)
+..++.||.+||=-.. .|..- .+.. ..+.-.+. +.| .+-..+-...++++..+.|+ ..++.+-++
T Consensus 102 ~RmreLGm~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~~f~~~~~L~P~dplF~~i~~~F~~~q~~~yG-~~~~Y~~D~ 180 (333)
T PF05089_consen 102 DRMRELGMTPVLPAFAGHVPRAFKRKYPNANITRQGNWNGFCRPYFLDPTDPLFAEIAKLFYEEQIKLYG-TDHIYAADP 180 (333)
T ss_dssp HHHHHHT-EEEEE--S-EE-TTHHHHSTT--EE---EETTEE--EEE-SS--HHHHHHHHHHHHHHHHH----SEEE--T
T ss_pred HHHHHcCCcccCCCcCCCCChHHHhcCCCCEEeeCCCcCCCCCCceeCCCCchHHHHHHHHHHHHHHhcC-CCceeCCCc
Confidence 9999999999984431 12100 0000 00000011 011 14566777889999999998 678999999
Q ss_pred ecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 294 MNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 294 ~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
+||-..+......+....+.+++++++.||+.+-++
T Consensus 181 FnE~~p~~~~~~~l~~~s~~v~~am~~~dp~AvWvm 216 (333)
T PF05089_consen 181 FNEGGPPSGDPEYLANVSKAVYKAMQAADPDAVWVM 216 (333)
T ss_dssp TTTS---TTS---HHHHHHHHHHHHHHH-TT-EEEE
T ss_pred cCCCCCCCCchHHHHHHHHHHHHHHHhhCCCcEEEE
Confidence 999887666667799999999999999999987555
|
Mutations on the alpha-N-acetylglucosaminidase gene can lead to mucopolysaccharidosis type IIIB (MPS IIIB; or Sanfilippo syndrome type B), characterised by neurological dysfunction but relatively mild somatic manifestations []. Alpha-N-acetylglucosaminidase is composed of three domains. This entry represents the central domain, which has a tim barrel fold [].; PDB: 4A4A_A 2VC9_A 2VCC_A 2VCB_A 2VCA_A. |
| >KOG2233 consensus Alpha-N-acetylglucosaminidase [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.024 Score=59.64 Aligned_cols=147 Identities=17% Similarity=0.178 Sum_probs=101.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccc-----------------------------cCC--CCCCCCcc----chHHHHHHHH
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIA-----------------------------YDP--KPPKPFVG----GSLQALDNAF 227 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~-----------------------------~~p--~~~~~~~~----~~l~~ld~~i 227 (535)
|..+++|+=.|||.+=.|.+-++. +.. .-++|... ..+-.-+++|
T Consensus 81 eR~iDWmALnGinl~la~~gQEaIWqkVf~~lgl~~eeldeyftgpAflAW~RMGNl~awgGpLs~aw~~~ql~LqkrIi 160 (666)
T KOG2233|consen 81 EREIDWMALNGINLVLAPLGQEAIWQKVFMGLGLQREELDEYFTGPAFLAWHRMGNLHAWGGPLSPAWMLNQLLLQKRII 160 (666)
T ss_pred HhHhhHHHHcCcceeeccchhHHHHHHHHHHcCCCHHHHHHhcccHHHHHHHHhcCccccCCCCCHHHHHHHHHHHHHHH
Confidence 899999999999999888543210 000 00122222 2344447899
Q ss_pred HHHHHcCCEEEEecCC--CC--------CCC----CCCCCCCCCCCCCC-----CChHHHHHHHHHHHHHHHHhCCCCcE
Q 046395 228 RWAQKYGMKVIVDLHA--LR--------VSQ----NGSPHSGSRDGFQE-----WSDSDIQETVAIIDFLASRYADHPSL 288 (535)
Q Consensus 228 ~~a~~~Gi~VIldlH~--~p--------g~~----ng~~~sg~~~~~~~-----W~~~~~~~~~~~~~~la~ry~~~p~V 288 (535)
+...+.||.+||--.+ .| .+. ..|.+.-++ -.|. .++-.++-...+++.+.+.|++..+|
T Consensus 161 drm~~lGmTpvLPaFaG~VP~al~rlfPesnf~rl~rWn~f~s~-~~C~l~v~P~dplF~eIgs~Flr~~~kefG~~tni 239 (666)
T KOG2233|consen 161 DRMLELGMTPVLPAFAGHVPDALERLFPESNFTRLPRWNNFTSR-YSCMLLVSPFDPLFQEIGSTFLRHQIKEFGGVTNI 239 (666)
T ss_pred HHHHHcCCCccchhhccccHHHHHHhCchhceeeccccCCCCcc-eeeeEEccCCcchHHHHHHHHHHHHHHHhCCcccc
Confidence 9999999999986542 22 111 112221111 1111 12456777789999999999998899
Q ss_pred EEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 289 VAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 289 ~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
..-+.+||..++...++-++.-..++|++.+++|++.+-++.
T Consensus 240 y~~DpFNE~~Pp~sepey~~staaAiyesm~kvdknaVWllQ 281 (666)
T KOG2233|consen 240 YSADPFNEILPPESEPEYVKSTAAAIYESMKKVDKNAVWLLQ 281 (666)
T ss_pred cccCcccccCCCCCChHHHHHHHHHHHHHHhccCcceEEeee
Confidence 999999999987777888999999999999999999876553
|
|
| >KOG3962 consensus Predicted actin-bundling protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.023 Score=53.95 Aligned_cols=103 Identities=17% Similarity=0.244 Sum_probs=80.4
Q ss_pred CCCceeEEEEeecCcEEEEecCCCceEEecc-CCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCC
Q 046395 15 LDGTQVQLISTKLKKYLTAENGSETILMANH-NSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEK 93 (535)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~a~~~g~~~~~anr-~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~ 93 (535)
|-| .|.+. +.-|.||.|+--|...|-+-. ....|.+=|.|.+..++++++.|++.=|+|++++. ++-|++.+.+.|
T Consensus 46 ~~g-~v~ie-~~~~~yl~a~dng~ft~g~ph~~~~gp~p~e~f~avki~dsrIaLKsGyGKYlsins-dglvvg~qeAvG 122 (246)
T KOG3962|consen 46 IEG-TVAIE-IDDGTYLGAMDNGLFTLGAPHDEVDGPEPEEQFMAVKISDSRIALKSGYGKYLSINS-DGLVVGRQEAVG 122 (246)
T ss_pred eeE-EEEEE-ecCceEEEEEecCceeeccCCccccCCCchhhEEEEEccCceEEecccccceeeecC-CccEEEehhhcC
Confidence 345 77777 777999987755555555543 33456788999999999999999999999999998 888999999999
Q ss_pred CCCceEEEecCCCCceeEEEecCCceEEEe
Q 046395 94 FPEPFQITRKNGEPHRVRFRASNGYFLQAK 123 (535)
Q Consensus 94 ~~e~f~~~~~~~~~~~v~I~~~nG~flq~~ 123 (535)
.-|.|.-|-- .+++-+-+.||.|...+
T Consensus 123 ~~EQw~~vFq---~~r~a~~as~s~~~~~~ 149 (246)
T KOG3962|consen 123 SREQWEPVFQ---EGRMALLASNSCFIRCN 149 (246)
T ss_pred cHhhchhhhh---ccceEEeeccceeEEec
Confidence 9999875553 24566777777776553
|
|
| >PLN02161 beta-amylase | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.073 Score=56.88 Aligned_cols=125 Identities=17% Similarity=0.327 Sum_probs=85.9
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRVSQNGSPHSGSRDGF 260 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg~~ng~~~sg~~~~~ 260 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..+.++++.+++.||+ ||+.+|.+.|...+. .+ ..-
T Consensus 120 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGGNvGd~--~~--IpL 191 (531)
T PLN02161 120 TVSLKALKLAGVHGIAVEV-WWGIVERFSPLEF---KWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGK--GG--ISL 191 (531)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCCCCCCc--cC--ccC
Confidence 7899999999999999999 8888887655568 899999999999999998 566778764422111 00 112
Q ss_pred CCCChHHHHHHHHHHHHHHHH-----hCC-----CCcEEEEEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCCCcE
Q 046395 261 QEWSDSDIQETVAIIDFLASR-----YAD-----HPSLVAIELMNEPKAPDLK-LDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 261 ~~W~~~~~~~~~~~~~~la~r-----y~~-----~p~V~~~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
+.| +..+.+. |+| ++.-+.+.+-|+|...+.+ .+.+.+|++...+.....-...+
T Consensus 192 P~W-----------V~~~g~~~pDi~ftDr~G~rn~EyLSlg~D~~pvl~GRTplq~Y~Dfm~SFr~~F~~~~~~~I 257 (531)
T PLN02161 192 PLW-----------IREIGDVNKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTKFEPYIGNVI 257 (531)
T ss_pred CHH-----------HHhhhccCCCceEEcCCCCcccceeeeecccchhcCCCCHHHHHHHHHHHHHHHHHHHhcCce
Confidence 222 1111111 332 2356678899999876544 47888888888887777654444
|
|
| >TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.19 Score=56.51 Aligned_cols=148 Identities=16% Similarity=0.160 Sum_probs=84.3
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccc-----cCCCCCCCC--ccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC--C
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIA-----YDPKPPKPF--VGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ--N 249 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~-----~~p~~~~~~--~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~--n 249 (535)
++-++.|+++|+|+|=| ||..... .++...-.. .-+..+.|+++|+.|.++||+||||+ |..+... .
T Consensus 160 ~~l~dyl~~LGvt~i~L~Pi~e~~~~~~wGY~~~~y~~~~~~~Gt~~dlk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~~ 239 (613)
T TIGR01515 160 DQLIPYVKELGFTHIELLPVAEHPFDGSWGYQVTGYYAPTSRFGTPDDFMYFVDACHQAGIGVILDWVPGHFPKDDHGLA 239 (613)
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCcccccccCCHHHHHHHHHHHHHCCCEEEEEecccCcCCccchhh
Confidence 44459999999999998 8743110 111100000 01457899999999999999999998 4432211 0
Q ss_pred ---C---CCCCCCC-CCCCCCC--------hHHHHHHHHHHHHHHHHhCCCC-------cEEEEEeecCCCC--C----C
Q 046395 250 ---G---SPHSGSR-DGFQEWS--------DSDIQETVAIIDFLASRYADHP-------SLVAIELMNEPKA--P----D 301 (535)
Q Consensus 250 ---g---~~~sg~~-~~~~~W~--------~~~~~~~~~~~~~la~ry~~~p-------~V~~~el~NEP~~--~----~ 301 (535)
+ +.+.... .....|. ++.++..++.++..++.|+=+- .++.+.-..++.. + .
T Consensus 240 ~~~~~~~y~~~~~~~~~~~~w~~~~~~~~~~~Vr~~l~~~~~~W~~ey~iDG~R~D~v~~~~~~~~~~~~~~~~~~~~~~ 319 (613)
T TIGR01515 240 EFDGTPLYEHKDPRDGEHWDWGTLIFDYGRPEVRNFLVANALYWAEFYHIDGLRVDAVASMLYLDYSRDEGEWSPNEDGG 319 (613)
T ss_pred ccCCCcceeccCCccCcCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCcEEEEcCHHHhhhhccccccccccccccCC
Confidence 0 0000000 0112232 6777888888888888775321 1221111122210 0 0
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 302 LKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 302 ~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
.....-..|.+++.+.||+..|+.++|-+
T Consensus 320 ~~~~~~~~fl~~~~~~v~~~~p~~~liaE 348 (613)
T TIGR01515 320 RENLEAVDFLRKLNQTVYEAFPGVVTIAE 348 (613)
T ss_pred cCChHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 11123467999999999999998877664
|
A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here. |
| >PLN02801 beta-amylase | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.05 Score=58.09 Aligned_cols=60 Identities=28% Similarity=0.630 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKV--IVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~V--IldlH~~pg 246 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..++++++.+++.||++ |+.+|.+.|
T Consensus 40 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 101 (517)
T PLN02801 40 EKQLKRLKEAGVDGVMVDV-WWGIVESKGPKQY---DWSAYRSLFELVQSFGLKIQAIMSFHQCGG 101 (517)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 6899999999999999999 8888887655558 7999999999999999985 677787543
|
|
| >PLN02877 alpha-amylase/limit dextrinase | Back alignment and domain information |
|---|
Probab=96.08 E-value=2.2 Score=49.97 Aligned_cols=110 Identities=11% Similarity=0.039 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHHHcCCEEEEec---CCCCCCC----CCCCC-----------CCCCCCC--C-CCC---hHHHHHHHHHH
Q 046395 220 LQALDNAFRWAQKYGMKVIVDL---HALRVSQ----NGSPH-----------SGSRDGF--Q-EWS---DSDIQETVAII 275 (535)
Q Consensus 220 l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~----ng~~~-----------sg~~~~~--~-~W~---~~~~~~~~~~~ 275 (535)
...++++|+.|.++||+||+|+ |....+. +..+. .|..... + ... +..++..++.+
T Consensus 465 I~efk~mV~~lH~~GI~VImDVVyNHt~~~g~~~~~s~ld~~vP~YY~r~~~~G~~~ns~c~n~~Ase~~mvrklIlDsl 544 (970)
T PLN02877 465 IIEFRKMVQALNRIGLRVVLDVVYNHLHSSGPFDENSVLDKIVPGYYLRRNSDGFIENSTCVNNTASEHYMVDRLIVDDL 544 (970)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCccccCCCCcchhhcccCCCCCceEEECCCCCcccCCccCCCccCCHHHHHHHHHHH
Confidence 5679999999999999999998 5432111 11100 1100000 0 001 34556677888
Q ss_pred HHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCC
Q 046395 276 DFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333 (535)
Q Consensus 276 ~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~ 333 (535)
+.-++.|+=+ . .-|+++..-.. .+....+..++++....+.++...+++++-+|
T Consensus 545 ~yW~~ey~VD-G-FRFDlmg~i~~--~tm~~~~~~L~~i~~~~~~~dg~~i~lyGEgW 598 (970)
T PLN02877 545 LNWAVNYKVD-G-FRFDLMGHLMK--RTMVRAKDALQSLTLERDGVDGSSIYLYGEGW 598 (970)
T ss_pred HHHHHHhCCC-E-EEEEccccccH--HHHHHHHHHHHHHhhhhcccCCCceEEEEeCC
Confidence 8888888542 2 23788877542 12223333333333333344544556677666
|
|
| >PLN00197 beta-amylase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.05 Score=58.59 Aligned_cols=60 Identities=15% Similarity=0.469 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg 246 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..+.++++.+++.||+ ||+.+|.+.|
T Consensus 130 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~p~~Y---dWsgY~~L~~mvr~~GLKlq~VmSFHqCGG 191 (573)
T PLN00197 130 KASLQALKSAGVEGIMMDV-WWGLVERESPGVY---NWGGYNELLEMAKRHGLKVQAVMSFHQCGG 191 (573)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeccCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 6899999999999999999 8888887655568 799999999999999998 5667787543
|
|
| >PRK12313 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.27 Score=55.66 Aligned_cols=145 Identities=14% Similarity=0.131 Sum_probs=80.2
Q ss_pred HHHHHHHHHcCCCEEEe-CCcccc-----ccCCCCCCCC--ccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC--C
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWI-----AYDPKPPKPF--VGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ--N 249 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~-----~~~p~~~~~~--~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~--n 249 (535)
++-++.|+++|+|+|=| ||.-.. ..++...-.. .-+..+.|+++|+.|.++||+||||+ |..+... .
T Consensus 174 ~~ll~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~~Gt~~d~k~lv~~~H~~Gi~VilD~V~nH~~~~~~~~~ 253 (633)
T PRK12313 174 DELIPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSRYGTPEDFMYLVDALHQNGIGVILDWVPGHFPKDDDGLA 253 (633)
T ss_pred HHHHHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccccc
Confidence 44469999999999986 552100 0111100000 11468899999999999999999998 4322111 0
Q ss_pred CCCC------CCC-CCCCCCCC--------hHHHHHHHHHHHHHHHHhCCCCcEEEEEee-cC------------C--CC
Q 046395 250 GSPH------SGS-RDGFQEWS--------DSDIQETVAIIDFLASRYADHPSLVAIELM-NE------------P--KA 299 (535)
Q Consensus 250 g~~~------sg~-~~~~~~W~--------~~~~~~~~~~~~~la~ry~~~p~V~~~el~-NE------------P--~~ 299 (535)
.++. ... ......|. ++.++..++.++...+.|+=+- + -++.. +. | ..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~w~~~~~n~~~~~vr~~l~~~~~~W~~~~~iDG-~-R~D~~~~~~~~d~~~~~~~~~~~~~ 331 (633)
T PRK12313 254 YFDGTPLYEYQDPRRAENPDWGALNFDLGKNEVRSFLISSALFWLDEYHLDG-L-RVDAVSNMLYLDYDEEGEWTPNKYG 331 (633)
T ss_pred ccCCCcceeecCCCCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCcE-E-EEcChhhhhhcccccccCcCCcccC
Confidence 0110 000 00112332 6777777788887777764321 0 01100 11 0 11
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 300 PDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 300 ~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
...+. .-..+.+.+.+.||+..|+.++|-+
T Consensus 332 ~~~~~-~~~~fl~~~~~~v~~~~p~~~liaE 361 (633)
T PRK12313 332 GRENL-EAIYFLQKLNEVVYLEHPDVLMIAE 361 (633)
T ss_pred CCCCc-HHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 11111 3467899999999999998766554
|
|
| >COG5520 O-Glycosyl hydrolase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.51 Score=48.28 Aligned_cols=222 Identities=14% Similarity=0.134 Sum_probs=104.8
Q ss_pred HcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCC-CCCCCCCCCCCCCChHHHH
Q 046395 191 QNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNG-SPHSGSRDGFQEWSDSDIQ 269 (535)
Q Consensus 191 ~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng-~~~sg~~~~~~~W~~~~~~ 269 (535)
.+|+..+|+||.--.+.-. +. ++. ..+.|.. -+-+..+|++|+-.-...|.+... ...-|...+..- .+-..
T Consensus 77 ~lg~si~Rv~I~~ndfsl~--g~-~d~-w~kels~-Ak~~in~g~ivfASPWspPa~Mktt~~~ngg~~g~Lk--~e~Ya 149 (433)
T COG5520 77 QLGFSILRVPIDSNDFSLG--GS-ADN-WYKELST-AKSAINPGMIVFASPWSPPASMKTTNNRNGGNAGRLK--YEKYA 149 (433)
T ss_pred ccCceEEEEEecccccccC--CC-cch-hhhhccc-chhhcCCCcEEEecCCCCchhhhhccCcCCccccccc--hhHhH
Confidence 4899999999963111100 11 110 1122221 123778999998877776654321 111111111111 12333
Q ss_pred HHHHHHHHHHHHhCCCC-cEEEEEeecCCCCCC---C---ChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCChhhh--
Q 046395 270 ETVAIIDFLASRYADHP-SLVAIELMNEPKAPD---L---KLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL-- 340 (535)
Q Consensus 270 ~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~~---~---~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~~~~~-- 340 (535)
.+.+++......++++. ++.+..+-|||...+ . .+++..+|+.+ ..+.+..+.-|++-.... +...+
T Consensus 150 ~yA~~l~~fv~~m~~nGvnlyalSVQNEPd~~p~~d~~~wtpQe~~rF~~q---yl~si~~~~rV~~pes~~-~~~~~~d 225 (433)
T COG5520 150 DYADYLNDFVLEMKNNGVNLYALSVQNEPDYAPTYDWCWWTPQEELRFMRQ---YLASINAEMRVIIPESFK-DLPNMSD 225 (433)
T ss_pred HHHHHHHHHHHHHHhCCCceeEEeeccCCcccCCCCcccccHHHHHHHHHH---hhhhhccccEEecchhcc-ccccccc
Confidence 44444444445555554 688899999998742 1 23344444443 334444344455433221 11111
Q ss_pred --h-cccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccC-CCcCCCCCCHHHHHH
Q 046395 341 --L-SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWS-CEWEAEGASKRDYQR 416 (535)
Q Consensus 341 --~-~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg-~~~~~~~~~~~~~~~ 416 (535)
+ ++..-..-.++..|.|..--. ++..- + . -.+..++.+|+.|-. .+++...+.++....
T Consensus 226 p~lnDp~a~a~~~ilg~H~Ygg~v~-----------~~p~~-l----a-k~~~~gKdlwmte~y~~esd~~s~dr~~~~~ 288 (433)
T COG5520 226 PILNDPKALANMDILGTHLYGGQVS-----------DQPYP-L----A-KQKPAGKDLWMTECYPPESDPNSADREALHV 288 (433)
T ss_pred ccccCHhHhcccceeEeeecccccc-----------cchhh-H----h-hCCCcCCceEEeecccCCCCCCcchHHHHHH
Confidence 1 221222445789999965211 11100 0 0 112235668998864 445544433322222
Q ss_pred HHHHHHHHHhh-CCcceEEEeeeeCC
Q 046395 417 FAEAQLDVYGR-ATFGWAYWAYKFAE 441 (535)
Q Consensus 417 ~~~~ql~~~~~-~~~Gw~~W~~k~~~ 441 (535)
.+.....+-+ ..-|..+|-+.-+.
T Consensus 289 -~~hi~~gm~~gg~~ayv~W~i~~~~ 313 (433)
T COG5520 289 -ALHIHIGMTEGGFQAYVWWNIRLDY 313 (433)
T ss_pred -HHHHHhhccccCccEEEEEEEeecc
Confidence 2222333323 33578889887764
|
|
| >PLN02803 beta-amylase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.062 Score=57.68 Aligned_cols=60 Identities=18% Similarity=0.439 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg 246 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..+.++++.+++.||+ +|+.+|.+.|
T Consensus 110 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~p~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 171 (548)
T PLN02803 110 NASLMALRSAGVEGVMVDA-WWGLVEKDGPMKY---NWEGYAELVQMVQKHGLKLQVVMSFHQCGG 171 (548)
T ss_pred HHHHHHHHHcCCCEEEEEe-eeeeeccCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 6899999999999999999 8888887655558 799999999999999998 4667787644
|
|
| >PLN02705 beta-amylase | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.063 Score=58.31 Aligned_cols=60 Identities=15% Similarity=0.427 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg 246 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..+.++++.+++.||+ ||+.+|.+.|
T Consensus 271 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mvr~~GLKlqvVmSFHqCGG 332 (681)
T PLN02705 271 RQELSHMKSLNVDGVVVDC-WWGIVEGWNPQKY---VWSGYRELFNIIREFKLKLQVVMAFHEYGG 332 (681)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeEeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEeeccCC
Confidence 6899999999999999999 8888887655558 799999999999999998 5677787644
|
|
| >KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.083 Score=56.71 Aligned_cols=151 Identities=22% Similarity=0.233 Sum_probs=94.1
Q ss_pred cchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG 259 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~ 259 (535)
..++--++-.++.|+|++|+ | .|+-|. -|..-+.|.+.||.|.=|+--+- + -
T Consensus 357 ~~~~~LL~Sv~e~~MN~lRV----W------GGGvYE------sd~FY~lad~lGilVWQD~MFAC---------A---l 408 (867)
T KOG2230|consen 357 AKTEFLLDSVAEVGMNMLRV----W------GGGVYE------SDYFYQLADSLGILVWQDMMFAC---------A---L 408 (867)
T ss_pred HHHHHHHHHHHHhCcceEEE----e------cCcccc------chhHHHHhhhccceehhhhHHHh---------h---c
Confidence 34455666678999999999 4 344343 34567889999999999886320 0 0
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-------------CCChHHHHHHHHH-HHHHHHhcCCCc
Q 046395 260 FQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-------------DLKLDSLKTYYKA-GYDTVRKYSSSA 325 (535)
Q Consensus 260 ~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-------------~~~~~~~~~~~~~-~~~aIR~~~p~~ 325 (535)
+ .-.++..+-..+-++.=+.|.+.||+|+.|.--||-... ......+.-+|++ +.+...+.++.+
T Consensus 409 Y-Pt~~eFl~sv~eEV~yn~~Rls~HpSviIfsgNNENEaAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~sr 487 (867)
T KOG2230|consen 409 Y-PTNDEFLSSVREEVRYNAMRLSHHPSVIIFSGNNENEAALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHSSR 487 (867)
T ss_pred c-cCcHHHHHHHHHHHHHHHHhhccCCeEEEEeCCCccHHHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCCCC
Confidence 0 001355666666677778899999999999999997531 1122344555666 444555566777
Q ss_pred EEEEcC-CCC--CChhhhhcccCCCCcEEEEEeecCcC
Q 046395 326 YVILSN-RLG--GEWSELLSFASNLSRVVIDVHFYNLF 360 (535)
Q Consensus 326 ~ii~~~-~~g--~~~~~~~~~~~~~~n~v~d~H~Y~~~ 360 (535)
+.+++. .-| ...+...+- .+.+|..=|+|+|.-+
T Consensus 488 Pfi~SSPsNG~ete~e~~VS~-NP~dn~~GDVHfYdy~ 524 (867)
T KOG2230|consen 488 PFIVSSPSNGKETEPENYVSS-NPQDNQNGDVHFYDYT 524 (867)
T ss_pred CceecCCCCCcccCccccccC-CCccccCCceEeeehh
Confidence 766654 233 222222221 3455666789999654
|
|
| >PLN02447 1,4-alpha-glucan-branching enzyme | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.33 Score=55.38 Aligned_cols=146 Identities=19% Similarity=0.233 Sum_probs=83.5
Q ss_pred hHHHHHHHHHcCCCEEEe-CCcc------ccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRI-PVGW------WIAYDPKP---PKPFVGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ 248 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRi-pv~~------w~~~~p~~---~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ 248 (535)
+++-+..||++|+|+|=| ||.- |. .++.. ..+ .-+..+.|+++|+.|.++||+||||+ |......
T Consensus 253 ~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wG-Y~~~~~fa~~~-~~Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~~~~~ 330 (758)
T PLN02447 253 ADDVLPRIKALGYNAVQLMAIQEHAYYGSFG-YHVTNFFAVSS-RSGTPEDLKYLIDKAHSLGLRVLMDVVHSHASKNTL 330 (758)
T ss_pred HHHHHHHHHHcCCCEEEECCccccCCCCCCC-cCcccCccccc-ccCCHHHHHHHHHHHHHCCCEEEEEecccccccccc
Confidence 366799999999999987 4321 10 01100 000 11356889999999999999999998 3322111
Q ss_pred ---CCC-------CCCCCCCCCCCCC--------hHHHHHHHHHHHHHHHHhCCC-------CcEEEE------E---ee
Q 046395 249 ---NGS-------PHSGSRDGFQEWS--------DSDIQETVAIIDFLASRYADH-------PSLVAI------E---LM 294 (535)
Q Consensus 249 ---ng~-------~~sg~~~~~~~W~--------~~~~~~~~~~~~~la~ry~~~-------p~V~~~------e---l~ 294 (535)
+.+ .+.+.......|. ++.++..++.++...+.|+=+ .+++.. + =+
T Consensus 331 ~gl~~fDg~~~~Yf~~~~~g~~~~w~~~~~N~~~~eVr~fLl~~~~~Wl~ey~IDGfRfDaV~smlY~~hg~~~~f~~~~ 410 (758)
T PLN02447 331 DGLNGFDGTDGSYFHSGPRGYHWLWDSRLFNYGNWEVLRFLLSNLRWWLEEYKFDGFRFDGVTSMLYHHHGLQMAFTGNY 410 (758)
T ss_pred ccccccCCCCccccccCCCCCcCcCCCceecCCCHHHHHHHHHHHHHHHHHhCcccccccchhhhhccccCcccccccCc
Confidence 111 1111111112342 466666777777777766421 122210 1 12
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 295 NEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 295 NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
||-.+...+. .-..|++.+...|++..|+.++|.+
T Consensus 411 ~~~~g~~~d~-~a~~fL~~~N~~i~~~~p~~~~IAE 445 (758)
T PLN02447 411 NEYFGMATDV-DAVVYLMLANDLLHGLYPEAVTIAE 445 (758)
T ss_pred ccccCCccCh-HHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 4433322233 3467999999999999999887664
|
|
| >PLN02905 beta-amylase | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.078 Score=57.81 Aligned_cols=60 Identities=13% Similarity=0.475 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg 246 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..+.++++.+++.||+ ||+.+|.+.|
T Consensus 289 ~a~L~aLK~aGVdGVmvDV-WWGiVE~~gP~~Y---dWsgY~~L~~mvr~~GLKlqvVMSFHqCGG 350 (702)
T PLN02905 289 LKQLRILKSINVDGVKVDC-WWGIVEAHAPQEY---NWNGYKRLFQMVRELKLKLQVVMSFHECGG 350 (702)
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcC---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 7899999999999999999 8888887655568 899999999999999998 5677787644
|
|
| >PRK05402 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.48 Score=54.46 Aligned_cols=146 Identities=12% Similarity=0.147 Sum_probs=81.7
Q ss_pred hHHHHHHHHHcCCCEEEe-CCcccc-----ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC--
Q 046395 182 TEEDFKFMSQNGLNAVRI-PVGWWI-----AYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ-- 248 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRi-pv~~w~-----~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~-- 248 (535)
.++-+..|+++|+|+|=| ||.-.. ..++...-..+ -+..+.|.++|+.|.++||+||||+ |..+...
T Consensus 268 ~~~l~~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~~Gt~~dfk~lV~~~H~~Gi~VilD~V~NH~~~~~~~~ 347 (726)
T PRK05402 268 ADQLIPYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSRFGTPDDFRYFVDACHQAGIGVILDWVPAHFPKDAHGL 347 (726)
T ss_pred HHHHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCccch
Confidence 344468999999999987 552110 01111000001 1467899999999999999999998 4322110
Q ss_pred CCCC------CCCC-CCCCCCCC--------hHHHHHHHHHHHHHHHHhCCCCcEEEEEe-ecC---------------C
Q 046395 249 NGSP------HSGS-RDGFQEWS--------DSDIQETVAIIDFLASRYADHPSLVAIEL-MNE---------------P 297 (535)
Q Consensus 249 ng~~------~sg~-~~~~~~W~--------~~~~~~~~~~~~~la~ry~~~p~V~~~el-~NE---------------P 297 (535)
..++ +... ......|. ++.++...+.++...++|+=+- +-++. -+. +
T Consensus 348 ~~~~~~~~y~~~~~~~~~~~~w~~~~~n~~~~~v~~~l~~~~~~W~~e~~iDG--~R~D~v~~~~~~~~~~~~g~~~~~~ 425 (726)
T PRK05402 348 ARFDGTALYEHADPREGEHPDWGTLIFNYGRNEVRNFLVANALYWLEEFHIDG--LRVDAVASMLYLDYSRKEGEWIPNI 425 (726)
T ss_pred hccCCCcceeccCCcCCccCCCCCccccCCCHHHHHHHHHHHHHHHHHhCCcE--EEECCHHHhhhcccccccccccccc
Confidence 0000 1000 01122331 6677777777777777764321 11221 111 1
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 298 KAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
.. +.....-..+.+.+...||+..|+.+++-+
T Consensus 426 ~~-~~~~~~~~~fl~~~~~~~~~~~p~~~liaE 457 (726)
T PRK05402 426 YG-GRENLEAIDFLRELNAVVHEEFPGALTIAE 457 (726)
T ss_pred cc-CcCCHHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 11 111123467899999999999999876654
|
|
| >COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.49 E-value=1.2 Score=49.73 Aligned_cols=142 Identities=13% Similarity=0.138 Sum_probs=80.0
Q ss_pred chHHHHHHHHHcCCCEEEe-CCcccc-----ccCCCCCCCCc----cchHHHHHHHHHHHHHcCCEEEEecC--CCCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRI-PVGWWI-----AYDPKPPKPFV----GGSLQALDNAFRWAQKYGMKVIVDLH--ALRVSQ 248 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRi-pv~~w~-----~~~p~~~~~~~----~~~l~~ld~~i~~a~~~Gi~VIldlH--~~pg~~ 248 (535)
..++-+..||++|+++|=| ||.-.. ..++. ..|. -+.-+.|.++|+.|.++||.||||+= ++|...
T Consensus 166 ~a~~llpYl~elG~T~IELMPv~e~p~~~sWGYq~~--g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 166 LAIELLPYLKELGITHIELMPVAEHPGDRSWGYQGT--GYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred HHHHHhHHHHHhCCCEEEEcccccCCCCCCCCCCcc--eeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 3477888999999999997 553100 01111 0111 14678899999999999999999993 233222
Q ss_pred CCC---CCCCCCC-------CCCCCC--------hHHHHHHHHHHHHHHHHh---------------CCCCcEEEEEeec
Q 046395 249 NGS---PHSGSRD-------GFQEWS--------DSDIQETVAIIDFLASRY---------------ADHPSLVAIELMN 295 (535)
Q Consensus 249 ng~---~~sg~~~-------~~~~W~--------~~~~~~~~~~~~~la~ry---------------~~~p~V~~~el~N 295 (535)
++. +.+-... -...|. ++.+..++.-...-.+.| .+...=.+-.+.|
T Consensus 244 ~~L~~fdg~~~~e~~~~~~~~~~~Wg~~i~~~gr~EVR~Fll~nal~Wl~~yHiDGlRvDAV~smly~d~~~~~~~~~~n 323 (628)
T COG0296 244 NYLARFDGTFLYEHEDPRRGEHTDWGTAIFNYGRNEVRNFLLANALYWLEEYHIDGLRVDAVASMLYLDYSRAEGEWVPN 323 (628)
T ss_pred chhhhcCCccccccCCcccccCCCcccchhccCcHHHHHHHHHHHHHHHHHhCCcceeeehhhhhhccchhhhhhccccc
Confidence 211 1110001 133554 233333333333333333 2222222335667
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHhcCCCcE
Q 046395 296 EPKAPDLKLDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 296 EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
|..+. ......++.+.+.+.|+...|..+
T Consensus 324 ~~ggr--~n~~a~efl~~~n~~i~~~~pg~~ 352 (628)
T COG0296 324 EYGGR--ENLEAAEFLRNLNSLIHEEEPGAM 352 (628)
T ss_pred ccCCc--ccHHHHHHhhhhhhhhcccCCCce
Confidence 77642 344678889999999998888664
|
|
| >TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.35 Score=53.58 Aligned_cols=133 Identities=17% Similarity=0.199 Sum_probs=74.8
Q ss_pred HHHHHHHHcCCCEEEe-CCcc------ccccCCCCCCCC--ccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCCCC-
Q 046395 184 EDFKFMSQNGLNAVRI-PVGW------WIAYDPKPPKPF--VGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQNG- 250 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~------w~~~~p~~~~~~--~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ng- 250 (535)
+.++.|+++|+|+|=| ||.- |. .++...... .-+..+.|+++|+.|.++||+||||+ |..+.+..-
T Consensus 115 ~~l~yl~~LGv~~i~L~Pi~~~~~~~~~G-Y~~~~~~~~~~~~G~~~e~k~lV~~aH~~Gi~VilD~V~NH~~~~~~~~~ 193 (542)
T TIGR02402 115 EKLPYLADLGITAIELMPVAQFPGTRGWG-YDGVLPYAPHNAYGGPDDLKALVDAAHGLGLGVILDVVYNHFGPEGNYLP 193 (542)
T ss_pred HhhHHHHHcCCCEEEeCccccCCCCCCCC-CCccCccccccccCCHHHHHHHHHHHHHCCCEEEEEEccCCCCCcccccc
Confidence 4589999999999987 5521 10 111100000 11467899999999999999999998 433321100
Q ss_pred CCCC-CCCCCCCCCC-------h---HHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHH
Q 046395 251 SPHS-GSRDGFQEWS-------D---SDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVR 319 (535)
Q Consensus 251 ~~~s-g~~~~~~~W~-------~---~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR 319 (535)
...+ -.......|. + ..++.+++.++..++.|+=+. . -+++...-.. . .-..+++++.+.+|
T Consensus 194 ~~~~y~~~~~~~~wg~~~n~~~~~~~~vr~~i~~~~~~W~~e~~iDG-f-R~D~~~~~~~--~---~~~~~l~~~~~~~~ 266 (542)
T TIGR02402 194 RYAPYFTDRYSTPWGAAINFDGPGSDEVRRYILDNALYWLREYHFDG-L-RLDAVHAIAD--T---SAKHILEELAREVH 266 (542)
T ss_pred ccCccccCCCCCCCCCccccCCCcHHHHHHHHHHHHHHHHHHhCCcE-E-EEeCHHHhcc--c---cHHHHHHHHHHHHH
Confidence 0000 0001112232 3 666777777777777774321 1 1333322211 0 12468888889999
Q ss_pred hcCCC
Q 046395 320 KYSSS 324 (535)
Q Consensus 320 ~~~p~ 324 (535)
++.|+
T Consensus 267 ~~~p~ 271 (542)
T TIGR02402 267 ELAAE 271 (542)
T ss_pred HHCCC
Confidence 99887
|
Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system. |
| >PLN02960 alpha-amylase | Back alignment and domain information |
|---|
Probab=95.41 E-value=0.67 Score=53.37 Aligned_cols=147 Identities=16% Similarity=0.207 Sum_probs=83.9
Q ss_pred chHHHHHHHHHcCCCEEEe-CCcc------ccccCCCCCCCC----ccchHHHHHHHHHHHHHcCCEEEEec---CCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRI-PVGW------WIAYDPKPPKPF----VGGSLQALDNAFRWAQKYGMKVIVDL---HALRV 246 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRi-pv~~------w~~~~p~~~~~~----~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg 246 (535)
++++-+..|+++|+|+|=| ||.- |. .++. ..| .-+..+.|+.+|+.|.++||+||||+ |..+.
T Consensus 418 ~~e~~LdYLk~LGvt~IeLmPv~e~~~~~swG-Y~~~--~yfa~~~~yGtp~dfk~LVd~aH~~GI~VILDvV~NH~~~d 494 (897)
T PLN02960 418 FTQKVLPHVKKAGYNAIQLIGVQEHKDYSSVG-YKVT--NFFAVSSRFGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 494 (897)
T ss_pred HHHHHHHHHHHcCCCEEEECCcccCCCCCCCC-CCcc--cCCCcccccCCHHHHHHHHHHHHHCCCEEEEEecccccCCc
Confidence 3456799999999999987 4421 10 0110 001 01357899999999999999999998 44332
Q ss_pred CCCC----------CCCCCCCCCCCCCC--------hHHHHHHHHHHHHHHHHhCCC-------CcEEEEE--eecCCC-
Q 046395 247 SQNG----------SPHSGSRDGFQEWS--------DSDIQETVAIIDFLASRYADH-------PSLVAIE--LMNEPK- 298 (535)
Q Consensus 247 ~~ng----------~~~sg~~~~~~~W~--------~~~~~~~~~~~~~la~ry~~~-------p~V~~~e--l~NEP~- 298 (535)
..++ +.+.+.......|. ++.++..+..+....+.|+=+ .+++..+ ...++.
T Consensus 495 ~~~~L~~FDG~~~~Yf~~~~~g~~~~WG~~~fNy~~~eVr~fLlsna~yWl~EyhIDGfR~DAV~sMlY~d~g~~~~~G~ 574 (897)
T PLN02960 495 EMVGLSLFDGSNDCYFHSGKRGHHKRWGTRMFKYGDHEVLHFLLSNLNWWVTEYRVDGFQFHSLGSMLYTHNGFASFTGD 574 (897)
T ss_pred cccchhhcCCCccceeecCCCCccCCCCCcccCCCCHHHHHHHHHHHHHHHHHHCCCceeecccceeeeeccCccccCCc
Confidence 1111 11111111122343 566777777777777776532 1222111 001111
Q ss_pred ----CCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 299 ----APDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 299 ----~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
.....-..-..|++.+...|++..|+.++|.+
T Consensus 575 ~~~~~n~~~d~~Ai~fL~~lN~~v~~~~P~vilIAE 610 (897)
T PLN02960 575 LDEYCNQYVDRDALIYLILANEMLHQLHPNIITIAE 610 (897)
T ss_pred ccccCCccCCchHHHHHHHHHHHHHhhCCCeEEEEE
Confidence 00011124567888999999999998887764
|
|
| >PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.022 Score=59.58 Aligned_cols=60 Identities=18% Similarity=0.516 Sum_probs=46.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKV--IVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~V--IldlH~~pg 246 (535)
+..++.||++|+..|=++| ||...+...+..| .|..++++++.+++.||++ |+.+|.+.|
T Consensus 19 ~~~L~~LK~~GV~GVmvdv-WWGiVE~~~p~~y---dWs~Y~~l~~~vr~~GLk~~~vmsfH~cGg 80 (402)
T PF01373_consen 19 EAQLRALKSAGVDGVMVDV-WWGIVEGEGPQQY---DWSGYRELFEMVRDAGLKLQVVMSFHQCGG 80 (402)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTGSSTTB------HHHHHHHHHHHHTT-EEEEEEE-S-BSS
T ss_pred HHHHHHHHHcCCcEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEeeecCCC
Confidence 7999999999999999999 7888888755558 8999999999999999986 567787644
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A .... |
| >smart00642 Aamy Alpha-amylase domain | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.066 Score=49.76 Aligned_cols=60 Identities=22% Similarity=0.321 Sum_probs=41.1
Q ss_pred HHHHHHHHHcCCCEEEeCCccccc--------cCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIA--------YDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~--------~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
.+.++.|+++|+|+|-|+=.+... .++......+ -+..+.++++|+.|+++||+||+|+-
T Consensus 22 ~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V 91 (166)
T smart00642 22 IEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred HHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 455779999999999984332111 1111100011 14679999999999999999999994
|
|
| >TIGR02104 pulA_typeI pullulanase, type I | Back alignment and domain information |
|---|
Probab=95.06 E-value=0.54 Score=52.87 Aligned_cols=136 Identities=14% Similarity=0.221 Sum_probs=76.9
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc-------------ccCCCC----CCCCcc------chHHHHHHHHHHHHHcCCEEEE
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI-------------AYDPKP----PKPFVG------GSLQALDNAFRWAQKYGMKVIV 239 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~-------------~~~p~~----~~~~~~------~~l~~ld~~i~~a~~~Gi~VIl 239 (535)
+-++.|+++|+|+|=| ||.-.. ..++.. ...|.. +..+.|+++|+.|.++||+|||
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~wGY~~~~y~~~~~~y~~~p~~~~~~~~efk~lV~~~H~~Gi~Vil 247 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNWGYDPLNYNVPEGSYSTNPYDPATRIRELKQMIQALHENGIRVIM 247 (605)
T ss_pred hHHHHHHHcCCCEEEeCCcccccccccccCCCCCCCCCCCccCCCcChhhhcCCCccchHHHHHHHHHHHHHHCCCEEEE
Confidence 4589999999999987 553110 011100 000100 1257899999999999999999
Q ss_pred ec---CCCCCCCCCCC-----------CCCCCCCCCCC-------ChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 240 DL---HALRVSQNGSP-----------HSGSRDGFQEW-------SDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 240 dl---H~~pg~~ng~~-----------~sg~~~~~~~W-------~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
|+ |...+....+. ..|.......| .+..++..++.++..+++|+=+ .. -+++...-
T Consensus 248 DvV~NH~~~~~~~~f~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~v~~~i~~~~~~W~~e~~iD-Gf-R~D~~~~~- 324 (605)
T TIGR02104 248 DVVYNHTYSREESPFEKTVPGYYYRYNEDGTLSNGTGVGNDTASEREMMRKFIVDSVLYWVKEYNID-GF-RFDLMGIH- 324 (605)
T ss_pred EEEcCCccCCCCCcccCCCCCeeEEECCCCCccCCCcccCCcccCCHHHHHHHHHHHHHHHHHcCCC-EE-EEechhcC-
Confidence 98 54321111111 00100000011 1566777777777777777432 22 24555332
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
+ ..+++++.+++++..|+.+++-+
T Consensus 325 ----~----~~~~~~~~~~~~~~~p~~~ligE 348 (605)
T TIGR02104 325 ----D----IETMNEIRKALNKIDPNILLYGE 348 (605)
T ss_pred ----C----HHHHHHHHHHHHhhCCCeEEEEc
Confidence 1 33667778888888887775543
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases. |
| >PRK12568 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.95 E-value=1.2 Score=50.87 Aligned_cols=144 Identities=15% Similarity=0.215 Sum_probs=82.6
Q ss_pred hHHHHHHHHHcCCCEEEe-CCc------cccccCCCCCCCC----ccchHHHHHHHHHHHHHcCCEEEEec---CCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRI-PVG------WWIAYDPKPPKPF----VGGSLQALDNAFRWAQKYGMKVIVDL---HALRVS 247 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRi-pv~------~w~~~~p~~~~~~----~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~ 247 (535)
.++-+..||++|+|+|=| ||. .|. .++. ..| .-+..+.+.++|+.|.++||+||||+ |..+..
T Consensus 272 a~~ll~ylk~LGvt~I~LmPi~e~~~~~~wG-Y~~~--~~~a~~~~~G~~~dfk~lV~~~H~~Gi~VIlD~V~nH~~~d~ 348 (730)
T PRK12568 272 AEQLIPYVQQLGFTHIELLPITEHPFGGSWG-YQPL--GLYAPTARHGSPDGFAQFVDACHRAGIGVILDWVSAHFPDDA 348 (730)
T ss_pred HHHHHHHHHHcCCCEEEECccccCCCCCCCC-CCCC--cCCccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccCCccc
Confidence 356689999999999986 552 111 1111 001 11467899999999999999999998 322210
Q ss_pred C--CCCC------CCCCCC-CCCCCC--------hHHHHHHHHHHHHHHHHhCCCC-------cEEEEE--------eec
Q 046395 248 Q--NGSP------HSGSRD-GFQEWS--------DSDIQETVAIIDFLASRYADHP-------SLVAIE--------LMN 295 (535)
Q Consensus 248 ~--ng~~------~sg~~~-~~~~W~--------~~~~~~~~~~~~~la~ry~~~p-------~V~~~e--------l~N 295 (535)
. ..++ +...+. ....|. ++.++..++.+....+.|.=+- +++..+ +-|
T Consensus 349 ~~l~~fdg~~~Ye~~d~~~g~~~~W~~~~~N~~~peVr~~li~~a~~Wl~eyhIDG~R~DAva~mly~d~~r~~g~w~pn 428 (730)
T PRK12568 349 HGLAQFDGAALYEHADPREGMHRDWNTLIYNYGRPEVTAYLLGSALEWIEHYHLDGLRVDAVASMLYRDYGRAEGEWVPN 428 (730)
T ss_pred cccccCCCccccccCCCcCCccCCCCCeecccCCHHHHHHHHHHHHHHHHHhCceEEEEcCHhHhhhhcccccccccccc
Confidence 0 0111 110011 122342 5667777777777777664321 111111 123
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 296 EPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 296 EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
+-.. ..+ ..-..|++++..+|++..|+.++|-+
T Consensus 429 ~~gg-~en-~ea~~Fl~~ln~~v~~~~P~~~~IAE 461 (730)
T PRK12568 429 AHGG-REN-LEAVAFLRQLNREIASQFPGVLTIAE 461 (730)
T ss_pred ccCC-ccC-hHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 3211 111 23467999999999999998876654
|
|
| >PRK10785 maltodextrin glucosidase; Provisional | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.76 Score=51.62 Aligned_cols=54 Identities=22% Similarity=0.345 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc--------c--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV--------G--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~--------~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.|+++|+|+|=| ||.- . +. ...|+ + +..+.|+++|+.|+++||+||||+
T Consensus 182 ~~kLdYL~~LGv~~I~L~Pif~-s---~s-~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~ 246 (598)
T PRK10785 182 SEKLPYLKKLGVTALYLNPIFT-A---PS-VHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDG 246 (598)
T ss_pred HHHHHHHHHcCCCEEEeCCccc-C---CC-CCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46689999999999987 4421 1 11 11121 1 467899999999999999999999
|
|
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.21 Score=42.28 Aligned_cols=82 Identities=11% Similarity=0.194 Sum_probs=59.8
Q ss_pred CceeEEEEeecCcEEEEecCC---CceEEeccCCCCCCCCceeEEEEecCCeEEEEee-CCcEEEeecC---CCe-EEEe
Q 046395 17 GTQVQLISTKLKKYLTAENGS---ETILMANHNSSSTSSWQTFRLWRINETFYNFRLS-NKQFIGLENQ---GNK-LVAV 88 (535)
Q Consensus 17 ~~~~~~~~~~~~~~~~a~~~g---~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~-~~~~v~~~~~---~~~-~~a~ 88 (535)
+...+|+++..|+||.+..++ |+.|+.-.... ..-+.|+|.+.++++|.|+.. .++.+.+.+. +|+ |+--
T Consensus 14 ~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~--~~~Q~W~i~~~~~g~y~I~n~~s~~~Ldv~~~~~~~g~~v~~~ 91 (105)
T PF14200_consen 14 DGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNG--NDNQQWKIEPVGDGYYRIRNKNSGKVLDVAGGSTANGTNVQQW 91 (105)
T ss_dssp TTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSS--SGGGEEEEEESTTSEEEEEETSTTEEEEEGGGSSSTTEBEEEE
T ss_pred CCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCC--CcCcEEEEEEecCCeEEEEECCCCcEEEECCCCCCCCCEEEEE
Confidence 457999999999999998775 67777766666 788999999999999999965 6788877642 222 4433
Q ss_pred cc-CCCCCCceEE
Q 046395 89 SA-TEKFPEPFQI 100 (535)
Q Consensus 89 ~~-~~~~~e~f~~ 100 (535)
.. .-+..+.|.|
T Consensus 92 ~~~~~~~~Q~W~l 104 (105)
T PF14200_consen 92 EYDNGSDNQQWKL 104 (105)
T ss_dssp E-STSSGGGEEEE
T ss_pred eCCCCCccCEEEe
Confidence 32 4455666654
|
... |
| >PF03662 Glyco_hydro_79n: Glycosyl hydrolase family 79, N-terminal domain ; InterPro: IPR005199 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.055 Score=55.36 Aligned_cols=28 Identities=36% Similarity=0.471 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 046395 219 SLQALDNAFRWAQKYGMKVIVDLHALRV 246 (535)
Q Consensus 219 ~l~~ld~~i~~a~~~Gi~VIldlH~~pg 246 (535)
..+..|++.+-|.+-|+++|..|-+..|
T Consensus 107 t~~rwd~l~~F~~~tG~~liFgLNAL~g 134 (319)
T PF03662_consen 107 TMSRWDELNNFAQKTGLKLIFGLNALLG 134 (319)
T ss_dssp -----HHHHHHHHHHT-EEEEEE-TTTS
T ss_pred chhHHHHHHHHHHHhCCEEEEEecccCC
Confidence 3578899999999999999999987643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of endo-beta-N-glucuronidase, or heparanase belonging to glycoside hydrolase family 79 (GH79 from CAZY). Heparan sulphate proteoglycans (HSPGs) play a key role in the self- assembly, insolubility and barrier properties of basement membranes and extracellular matrices. Hence, cleavage of heparan sulphate (HS) affects the integrity and functional state of tissues and thereby fundamental normal and pathological phenomena involving cell migration and response to changes in the extracellular microenvironment. Heparanase degrades HS at specific intrachain sites. The enzyme is synthesized as a latent approximately 65 kDa protein that is processed at the N terminus into a highly active approximately 50 kDa form. Experimental evidence suggests that heparanase may facilitate both tumor cell invasion and neovascularization, both critical steps in cancer progression. The enzyme is also involved in cell migration associated with inflammation and autoimmunity [].; GO: 0016798 hydrolase activity, acting on glycosyl bonds, 0016020 membrane; PDB: 3VNY_A 3VO0_A 3VNZ_A. |
| >PRK14705 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=94.10 E-value=1.3 Score=53.14 Aligned_cols=143 Identities=17% Similarity=0.229 Sum_probs=82.4
Q ss_pred HHHHHHHHHcCCCEEEe-CCc------cccccCCCC----CCCCccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI-PVG------WWIAYDPKP----PKPFVGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ 248 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~------~w~~~~p~~----~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ 248 (535)
++-++.||++|+|+|=| ||. .|- .++.. ...| +..+.|+++|+.|.++||+||||+ |..+...
T Consensus 769 ~~lldYlk~LGvt~IeLmPv~e~p~~~swG-Y~~~~y~ap~~ry--Gt~~dfk~lVd~~H~~GI~VILD~V~nH~~~d~~ 845 (1224)
T PRK14705 769 KELVDYVKWLGFTHVEFMPVAEHPFGGSWG-YQVTSYFAPTSRF--GHPDEFRFLVDSLHQAGIGVLLDWVPAHFPKDSW 845 (1224)
T ss_pred HHHHHHHHHhCCCEEEECccccCCCCCCCC-CCccccCCcCccc--CCHHHHHHHHHHHHHCCCEEEEEeccccCCcchh
Confidence 45579999999999976 552 121 11110 0011 468899999999999999999998 3321110
Q ss_pred -----CC---CCCCCCC-CCCCCCC--------hHHHHHHHHHHHHHHHHhCCCC----c---EEEEE--------eecC
Q 046395 249 -----NG---SPHSGSR-DGFQEWS--------DSDIQETVAIIDFLASRYADHP----S---LVAIE--------LMNE 296 (535)
Q Consensus 249 -----ng---~~~sg~~-~~~~~W~--------~~~~~~~~~~~~~la~ry~~~p----~---V~~~e--------l~NE 296 (535)
.+ +.+.... .....|. ++.++..++.+....++|+=+- . ++..+ +-|+
T Consensus 846 ~l~~fdg~~~y~~~d~~~g~~~~Wg~~~fn~~~~eVr~fli~~a~~Wl~eyhiDGfR~Dav~~mly~Dysr~~g~w~pn~ 925 (1224)
T PRK14705 846 ALAQFDGQPLYEHADPALGEHPDWGTLIFDFGRTEVRNFLVANALYWLDEFHIDGLRVDAVASMLYLDYSREEGQWRPNR 925 (1224)
T ss_pred hhhhcCCCcccccCCcccCCCCCCCCceecCCCHHHHHHHHHHHHHHHHHhCCCcEEEeehhhhhhcccccccccccccc
Confidence 01 1111100 1123342 5667777777777777775432 1 11111 1122
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 297 P~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
-.+ ..+ ..-..|++++.+.|++..|..++|-+
T Consensus 926 ~gg-~en-~~ai~fl~~ln~~v~~~~p~~~~IAE 957 (1224)
T PRK14705 926 FGG-REN-LEAISFLQEVNATVYKTHPGAVMIAE 957 (1224)
T ss_pred cCC-ccC-hHHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 221 112 23467999999999999998876653
|
|
| >COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.37 Score=54.46 Aligned_cols=64 Identities=20% Similarity=0.387 Sum_probs=45.1
Q ss_pred hHHHHHHHHHcCCCEEEe-CCccccccC--------------CC----CCCCCcc-----chHHHHHHHHHHHHHcCCEE
Q 046395 182 TEEDFKFMSQNGLNAVRI-PVGWWIAYD--------------PK----PPKPFVG-----GSLQALDNAFRWAQKYGMKV 237 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRi-pv~~w~~~~--------------p~----~~~~~~~-----~~l~~ld~~i~~a~~~Gi~V 237 (535)
.+..|+.||++|+++|.| ||..+.... |. |...|.. ..+..++.+|+.+.++||.|
T Consensus 202 ~~~~i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~~~Yss~p~p~~~i~EfK~mV~~lHkaGI~V 281 (697)
T COG1523 202 EPVIIDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPEGRYASNPEPATRIKEFKDMVKALHKAGIEV 281 (697)
T ss_pred cccHHHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCCccccCCCCcchHHHHHHHHHHHHHHcCCEE
Confidence 345599999999999996 776433211 10 0011222 25889999999999999999
Q ss_pred EEec---CCCC
Q 046395 238 IVDL---HALR 245 (535)
Q Consensus 238 Ildl---H~~p 245 (535)
|||+ |.+-
T Consensus 282 ILDVVfNHTae 292 (697)
T COG1523 282 ILDVVFNHTAE 292 (697)
T ss_pred EEEEeccCccc
Confidence 9999 7653
|
|
| >COG3623 SgaU Putative L-xylulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.89 E-value=2 Score=41.71 Aligned_cols=118 Identities=16% Similarity=0.246 Sum_probs=67.3
Q ss_pred ccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeec
Q 046395 216 VGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMN 295 (535)
Q Consensus 216 ~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~N 295 (535)
.+.+++.+.++|..|.+.||++|= |-++ +.. +..=+++.+++|++-+++.++.=....-.+++|+|-
T Consensus 91 r~~aleiM~KaI~LA~dLGIRtIQ-LAGY-------DVY-----YE~~d~eT~~rFi~g~~~a~~lA~~aqV~lAvEiMD 157 (287)
T COG3623 91 RQQALEIMEKAIQLAQDLGIRTIQ-LAGY-------DVY-----YEEADEETRQRFIEGLKWAVELAARAQVMLAVEIMD 157 (287)
T ss_pred HHHHHHHHHHHHHHHHHhCceeEe-eccc-------eee-----eccCCHHHHHHHHHHHHHHHHHHHhhccEEEeeecc
Confidence 456899999999999999999974 2211 110 000014678888766655443222233578899999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-----CCCCCh-hhhhcccCCCCcEEEEEeecCc
Q 046395 296 EPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-----RLGGEW-SELLSFASNLSRVVIDVHFYNL 359 (535)
Q Consensus 296 EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-----~~g~~~-~~~~~~~~~~~n~v~d~H~Y~~ 359 (535)
-|.. .-+.+.....+.+++-...+..+ .|+.+. +++ ..+ ..-+..+|.-..
T Consensus 158 tpfm---------~sIsk~~~~~~~I~sP~f~vYPDiGNlsaw~ndv~~El---~lG-~~~I~aiHlKDT 214 (287)
T COG3623 158 TPFM---------NSISKWLKYDKYINSPWFTVYPDIGNLSAWNNDVQSEL---QLG-IDKIVAIHLKDT 214 (287)
T ss_pred cHHH---------HHHHHHHHHHHHhCCCcEEecCCcccHhhhhhhHHHHH---HcC-cCceEEEEeccc
Confidence 8873 12223344556667666655543 232221 222 122 334668887655
|
|
| >PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=93.78 E-value=0.14 Score=51.52 Aligned_cols=56 Identities=21% Similarity=0.389 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|-|+=-+. .+.....|. -+..+.|.++|+.|+++||+||+|+
T Consensus 7 ~~kLdyl~~lGv~~I~l~Pi~~---~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~ 72 (316)
T PF00128_consen 7 IDKLDYLKDLGVNAIWLSPIFE---SPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDV 72 (316)
T ss_dssp HHTHHHHHHHTESEEEESS-EE---SSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCceecccccc---cccccccccceeeeccccccchhhhhhhhhhccccccceEEEee
Confidence 3558899999999999843221 110011121 1578999999999999999999999
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A .... |
| >TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive | Back alignment and domain information |
|---|
Probab=93.71 E-value=1.9 Score=51.49 Aligned_cols=99 Identities=18% Similarity=0.284 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHHcCCEEEEec---CCCCCCC-----CCCCC----CCCC-----CCCCC-CChHHHHHHHHHHHHHHHH
Q 046395 220 LQALDNAFRWAQKYGMKVIVDL---HALRVSQ-----NGSPH----SGSR-----DGFQE-WSDSDIQETVAIIDFLASR 281 (535)
Q Consensus 220 l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~-----ng~~~----sg~~-----~~~~~-W~~~~~~~~~~~~~~la~r 281 (535)
.+.|+++|+.|+++||+||||+ |....+. .++.+ .|.. .+... ..+..++..++.++..++.
T Consensus 554 i~EfK~LV~alH~~GI~VILDVVyNHt~~~~~f~~~~p~Yy~~~~~~G~~~~~~~g~~l~~e~~~vrk~iiDsl~yWv~e 633 (1111)
T TIGR02102 554 IAEFKNLINEIHKRGMGVILDVVYNHTAKVYIFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHEMSRRILVDSIKYLVDE 633 (1111)
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccccccccccCCCceEeeCCCCCcccccCCCCCCcCCHHHHHHHHHHHHHHHHh
Confidence 6789999999999999999998 5432111 00100 0100 00000 1156677778888888888
Q ss_pred hCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 282 YADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 282 y~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
|+=+ . +-|+++..- + ..+++.+..++++++|+.+++-
T Consensus 634 y~VD-G-FRfDl~g~~-----d----~~~~~~~~~~l~~~dP~~~liG 670 (1111)
T TIGR02102 634 FKVD-G-FRFDMMGDH-----D----AASIEIAYKEAKAINPNIIMIG 670 (1111)
T ss_pred cCCc-E-EEEeccccC-----C----HHHHHHHHHHHHHhCcCEEEEE
Confidence 8542 2 236776431 2 2355666777888899765443
|
Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645). |
| >PRK14706 glycogen branching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=93.48 E-value=3 Score=47.16 Aligned_cols=142 Identities=13% Similarity=0.185 Sum_probs=80.6
Q ss_pred HHHHHHHHHcCCCEEEe-CCcc------ccccCCCC----CCCCccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGW------WIAYDPKP----PKPFVGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ 248 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~------w~~~~p~~----~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ 248 (535)
++-+..||++|+|+|=| ||.- |. .++.. ...| +..+.|+++|+.|.++||+||||+ |..+. .
T Consensus 171 ~~l~~ylk~lG~t~velmPv~e~~~~~~wG-Y~~~~~~~~~~~~--g~~~~~~~lv~~~H~~gi~VilD~v~nH~~~~-~ 246 (639)
T PRK14706 171 HRLGEYVTYMGYTHVELLGVMEHPFDGSWG-YQVTGYYAPTSRL--GTPEDFKYLVNHLHGLGIGVILDWVPGHFPTD-E 246 (639)
T ss_pred HHHHHHHHHcCCCEEEccchhcCCCCCCCC-cCccccccccccc--CCHHHHHHHHHHHHHCCCEEEEEecccccCcc-h
Confidence 45458899999999986 4421 10 01100 0011 457899999999999999999998 43221 1
Q ss_pred CCC---C------CCCCCCC-CCCCC--------hHHHHHHHHHHHHHHHHhCCCC-------cEEEEE------eecCC
Q 046395 249 NGS---P------HSGSRDG-FQEWS--------DSDIQETVAIIDFLASRYADHP-------SLVAIE------LMNEP 297 (535)
Q Consensus 249 ng~---~------~sg~~~~-~~~W~--------~~~~~~~~~~~~~la~ry~~~p-------~V~~~e------l~NEP 297 (535)
++. + ......+ ...|. ++.++..++.++...+.|+=+. +++-++ +-|+.
T Consensus 247 ~~l~~~dg~~~y~~~~~~~g~~~~w~~~~~~~~~~eVr~~l~~~~~~W~~e~~iDG~R~Dav~~~ly~d~~~~~~~~~~~ 326 (639)
T PRK14706 247 SGLAHFDGGPLYEYADPRKGYHYDWNTYIFDYGRNEVVMFLIGSALKWLQDFHVDGLRVDAVASMLYLDFSRTEWVPNIH 326 (639)
T ss_pred hhhhccCCCcceeccCCcCCcCCCCCCcccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeehheeecccCccccccccc
Confidence 111 1 0000001 12232 5677777777777777664321 121111 11222
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 298 KAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
.+ .....-..|++.+...||+..|+.++|-+
T Consensus 327 gg--~~n~~a~~fl~~ln~~v~~~~p~~~~iAE 357 (639)
T PRK14706 327 GG--RENLEAIAFLKRLNEVTHHMAPGCMMIAE 357 (639)
T ss_pred CC--cccHHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 21 11234567899999999999998776653
|
|
| >PF14871 GHL6: Hypothetical glycosyl hydrolase 6 | Back alignment and domain information |
|---|
Probab=93.38 E-value=0.86 Score=40.65 Aligned_cols=98 Identities=19% Similarity=0.298 Sum_probs=59.3
Q ss_pred HHHHHHHHHcCCCEEEeCCc---cccccCCC--CCCCCccchHHHHHHHHHHHHHcCCEEEEecCC-C--------CC--
Q 046395 183 EEDFKFMSQNGLNAVRIPVG---WWIAYDPK--PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA-L--------RV-- 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~---~w~~~~p~--~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~-~--------pg-- 246 (535)
++-++.|++.|+|+|-+... -|...... +..|+.. .+.|.++|+.|++.||+|++-+-. . |.
T Consensus 3 ~~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L~--~Dllge~v~a~h~~Girv~ay~~~~~d~~~~~~HPeW~ 80 (132)
T PF14871_consen 3 EQFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGLK--RDLLGEQVEACHERGIRVPAYFDFSWDEDAAERHPEWF 80 (132)
T ss_pred HHHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCCC--cCHHHHHHHHHHHCCCEEEEEEeeecChHHHHhCCcee
Confidence 46678899999999999543 12222211 1123332 688999999999999999975521 1 21
Q ss_pred --CCCCCCCCCCCCCCCCCC-----hHHHHHHHHHHHHHHHHh
Q 046395 247 --SQNGSPHSGSRDGFQEWS-----DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 247 --~~ng~~~sg~~~~~~~W~-----~~~~~~~~~~~~~la~ry 282 (535)
..+|....+.......|. ..+++...+.++++.++|
T Consensus 81 ~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~y 123 (132)
T PF14871_consen 81 VRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDRY 123 (132)
T ss_pred eECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHcC
Confidence 111111111111122232 567788899999999999
|
|
| >PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.72 Score=47.39 Aligned_cols=147 Identities=19% Similarity=0.219 Sum_probs=85.0
Q ss_pred HHHHHHHHHcCCCEEEeCCccc------cccCCCC----CCCCccchHHHHHHHHHHHHHcCCEEEEec--C--CCCCC-
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWW------IAYDPKP----PKPFVGGSLQALDNAFRWAQKYGMKVIVDL--H--ALRVS- 247 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w------~~~~p~~----~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl--H--~~pg~- 247 (535)
++-++.|+++|||+|=+-|-.. +-+.|.. +.+.....++.|..+|+.|+++||.|.-=+ . ..+.+
T Consensus 22 ~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~DpL~~~I~eaHkrGlevHAW~~~~~~~~~~~~ 101 (311)
T PF02638_consen 22 DEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFDPLEFMIEEAHKRGLEVHAWFRVGFNAPDVSH 101 (311)
T ss_pred HHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCccHHHHHHHHHHHcCCEEEEEEEeecCCCchhh
Confidence 6888899999999997755321 1111111 111111258899999999999999986322 0 00000
Q ss_pred ---CCC-C---CCCCCC------CCCCCCC----hHHHHHHHHHHHHHHHHhCCCCcEEEEE--ee-------cC-----
Q 046395 248 ---QNG-S---PHSGSR------DGFQEWS----DSDIQETVAIIDFLASRYADHPSLVAIE--LM-------NE----- 296 (535)
Q Consensus 248 ---~ng-~---~~sg~~------~~~~~W~----~~~~~~~~~~~~~la~ry~~~p~V~~~e--l~-------NE----- 296 (535)
..+ + .+.+.. .+...|. |+.++..++.++.|+++|. -..|. ++ .+ ++
T Consensus 102 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Yd-vDGIh-lDdy~yp~~~~g~~~~~~~~ 179 (311)
T PF02638_consen 102 ILKKHPEWFAVNHPGWVRTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNYD-VDGIH-LDDYFYPPPSFGYDFPDVAA 179 (311)
T ss_pred hhhcCchhheecCCCceeecccCCCCceEECCCCHHHHHHHHHHHHHHHhcCC-CCeEE-ecccccccccCCCCCccHHH
Confidence 000 0 111110 0111232 8899999999999999984 22332 22 11 11
Q ss_pred --------CCCCCC-------ChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 297 --------PKAPDL-------KLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 297 --------P~~~~~-------~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
|..... ..+.+..+.++++++|+++.|...+-++.
T Consensus 180 y~~~~g~~~~~~~~d~~W~~WRr~~I~~~V~~i~~~ik~~kP~v~~sisp 229 (311)
T PF02638_consen 180 YEKYTGKDPFSSPEDDAWTQWRRDNINNFVKRIYDAIKAIKPWVKFSISP 229 (311)
T ss_pred HHHhcCcCCCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 110011 13456778999999999999998876653
|
|
| >TIGR02100 glgX_debranch glycogen debranching enzyme GlgX | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.65 Score=52.93 Aligned_cols=57 Identities=23% Similarity=0.498 Sum_probs=39.0
Q ss_pred HHHHHHHcCCCEEEe-CCcccc--------------ccCCCC----CCCCcc-chHHHHHHHHHHHHHcCCEEEEec
Q 046395 185 DFKFMSQNGLNAVRI-PVGWWI--------------AYDPKP----PKPFVG-GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 185 D~~~ik~~G~N~VRi-pv~~w~--------------~~~p~~----~~~~~~-~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
-++.||++|+|+|=| ||.-.. ..+|.. ...|-. +..+.|+++|+.|.++||+||||+
T Consensus 189 ~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDv 265 (688)
T TIGR02100 189 MIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNTLGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDV 265 (688)
T ss_pred hhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCcccccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 589999999999987 553110 011110 001211 347889999999999999999998
|
This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase. |
| >PRK03705 glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=93.04 E-value=0.91 Score=51.41 Aligned_cols=57 Identities=25% Similarity=0.526 Sum_probs=38.5
Q ss_pred HHHHHHHcCCCEEEe-CCcccc--------------ccCCC----CCCCCcc---chHHHHHHHHHHHHHcCCEEEEec
Q 046395 185 DFKFMSQNGLNAVRI-PVGWWI--------------AYDPK----PPKPFVG---GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 185 D~~~ik~~G~N~VRi-pv~~w~--------------~~~p~----~~~~~~~---~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
-++.||++|+|+|=| ||.-.. ..+|. +...|-. ..++.|+++|+.|.++||+||||+
T Consensus 184 ~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~ywGYd~~~yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~VIlDv 262 (658)
T PRK03705 184 MIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPLAMFALDPAYASGPETALDEFRDAVKALHKAGIEVILDV 262 (658)
T ss_pred chHHHHHcCCCEEEecCcccCCCcccccccccccccCcccccccccccccCCCCcchHHHHHHHHHHHHHCCCEEEEEE
Confidence 489999999999987 553110 00110 0011211 136789999999999999999998
|
|
| >COG3534 AbfA Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.98 E-value=8.3 Score=41.06 Aligned_cols=158 Identities=15% Similarity=0.245 Sum_probs=92.4
Q ss_pred HHHHHHHHHcCCCEEEeCCc-------cccccCCCCCCC--------CccchHHHHHHHHHHHHHcCCEEEEecCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVG-------WWIAYDPKPPKP--------FVGGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~-------~w~~~~p~~~~~--------~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~ 247 (535)
++-++.+|++.+-.+|.|=+ |...+.|.+..| ..+..-=-..++++||++.|..+.|.+.--
T Consensus 52 kDVle~lk~Lk~P~lR~PGGnFvs~Y~WeDGIGP~e~Rp~rldlaW~t~EtN~~Gt~EF~~~~e~iGaep~~avN~G--- 128 (501)
T COG3534 52 KDVLEALKDLKIPVLRWPGGNFVSGYHWEDGIGPREERPRRLDLAWGTTETNEFGTHEFMDWCELIGAEPYIAVNLG--- 128 (501)
T ss_pred HHHHHHHHhcCCceeecCCcccccccccccCcCchhhCchhhcccccccccccccHHHHHHHHHHhCCceEEEEecC---
Confidence 67788899999999999864 333333332211 112233346789999999999998877631
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHH--------HHHHHHHHhCC-CC-cEEEEEeecCCCCC----CCChHHHHHHHHH
Q 046395 248 QNGSPHSGSRDGFQEWSDSDIQETVA--------IIDFLASRYAD-HP-SLVAIELMNEPKAP----DLKLDSLKTYYKA 313 (535)
Q Consensus 248 ~ng~~~sg~~~~~~~W~~~~~~~~~~--------~~~~la~ry~~-~p-~V~~~el~NEP~~~----~~~~~~~~~~~~~ 313 (535)
++ + .+....+++ +|..+-..++- .| +|-.|.|-||-.+| ....+.+..++.+
T Consensus 129 --------sr-g-----vd~ar~~vEY~n~pggtywsdlR~~~G~~~P~nvK~w~lGNEm~GpWq~G~~~a~EY~~~A~e 194 (501)
T COG3534 129 --------SR-G-----VDEARNWVEYCNHPGGTYWSDLRRENGREEPWNVKYWGLGNEMDGPWQCGHKTAPEYGRLANE 194 (501)
T ss_pred --------Cc-c-----HHHHHHHHHHccCCCCChhHHHHHhcCCCCCcccceEEeccccCCCcccccccCHHHHHHHHH
Confidence 10 0 012222332 33344333332 33 79999999999765 2345667677777
Q ss_pred HHHHHHhcCCCcEEEEcC-CCC-----CChhhh-hcccCCCCcEEEEEeecC
Q 046395 314 GYDTVRKYSSSAYVILSN-RLG-----GEWSEL-LSFASNLSRVVIDVHFYN 358 (535)
Q Consensus 314 ~~~aIR~~~p~~~ii~~~-~~g-----~~~~~~-~~~~~~~~n~v~d~H~Y~ 358 (535)
..+..+=.+|..-.+++. .-+ .+|+.. +.- ....-..+++|+|.
T Consensus 195 ~~k~~k~~d~t~e~~v~g~a~~~n~~~~~W~~~vl~~-~~e~vD~ISlH~Y~ 245 (501)
T COG3534 195 YRKYMKYFDPTIENVVCGSANGANPTDPNWEAVVLEE-AYERVDYISLHYYK 245 (501)
T ss_pred HHHHHhhcCccccceEEeecCCCCCCchHHHHHHHHH-HhhhcCeEEEEEec
Confidence 777777777764444322 111 234332 221 22335689999993
|
|
| >PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
Probab=91.87 E-value=1.5 Score=45.65 Aligned_cols=135 Identities=13% Similarity=0.078 Sum_probs=77.2
Q ss_pred cchHHHHHHHHHcCCCEEEeCCcccccc--CCCCCCCCcc----chHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAY--DPKPPKPFVG----GSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPH 253 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~--~p~~~~~~~~----~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~ 253 (535)
+-.++-++.+|++|+.-|=+---.-..+ =|..-.+|+. ..-+.+.+++++|+++||++-+-+|... |.+
T Consensus 91 fD~dqW~~~ak~aGakY~VlTakHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~~d-----w~~ 165 (346)
T PF01120_consen 91 FDADQWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSPWD-----WHH 165 (346)
T ss_dssp --HHHHHHHHHHTT-SEEEEEEE-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEESSS-----CCC
T ss_pred CCHHHHHHHHHHcCCCEEEeehhhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecchH-----hcC
Confidence 4457888889999999987622100000 0111112321 2568899999999999999999887531 111
Q ss_pred CCCCCCC----CC---CC---hHH-HHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 046395 254 SGSRDGF----QE---WS---DSD-IQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 254 sg~~~~~----~~---W~---~~~-~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~ 322 (535)
....... .. -. .++ .+.+..-+++|.++| ++.++-++...... ...+. +.+.++.||+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~EL~~~Y--~~d~lWfDg~~~~~-----~~~~~--~~~~~~~i~~~q 236 (346)
T PF01120_consen 166 PDYPPDEEGDENGPADGPGNWQRYYNEYWLAQLRELLTRY--KPDILWFDGGWPDP-----DEDWD--SAELYNWIRKLQ 236 (346)
T ss_dssp TTTTSSCHCHHCC--HCCHHHHHHHHHHHHHHHHHHHHCS--TESEEEEESTTSCC-----CTHHH--HHHHHHHHHHHS
T ss_pred cccCCCccCCcccccccchhhHhHhhhhhHHHHHHHHhCC--CcceEEecCCCCcc-----ccccC--HHHHHHHHHHhC
Confidence 1100000 00 00 122 336667888999999 67888788776642 11222 288899999999
Q ss_pred CCcEEE
Q 046395 323 SSAYVI 328 (535)
Q Consensus 323 p~~~ii 328 (535)
|+.+|.
T Consensus 237 p~~ii~ 242 (346)
T PF01120_consen 237 PDVIIN 242 (346)
T ss_dssp TTSEEE
T ss_pred CeEEEe
Confidence 977643
|
2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B .... |
| >PRK09441 cytoplasmic alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=90.10 E-value=0.6 Score=50.98 Aligned_cols=59 Identities=24% Similarity=0.277 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCEEEeCCcccc-------ccCCCCCC---------CCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWI-------AYDPKPPK---------PFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~-------~~~p~~~~---------~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.|+++|+++|=|+=.+.. ..++.... ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 25 ~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi~D~ 101 (479)
T PRK09441 25 AERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVYADV 101 (479)
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35589999999999988432211 11111100 0111 467889999999999999999999
|
|
| >PRK07379 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=89.56 E-value=2.5 Score=45.03 Aligned_cols=121 Identities=15% Similarity=0.174 Sum_probs=79.0
Q ss_pred cchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPHS 254 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~s 254 (535)
.++++.++.|++.|+|.|-|.| ..+.+.. -+.. -..+.+.++++.+++.|+. |-+|+- +.||
T Consensus 112 ~lt~e~l~~l~~~GvnrislGv--QS~~d~~L~~l~R~---~~~~~~~~ai~~l~~~G~~~v~~dlI~GlPg-------- 178 (400)
T PRK07379 112 TFDLEQLQGYRSLGVNRVSLGV--QAFQDELLALCGRS---HRVKDIFAAVDLIHQAGIENFSLDLISGLPH-------- 178 (400)
T ss_pred cCCHHHHHHHHHCCCCEEEEEc--ccCCHHHHHHhCCC---CCHHHHHHHHHHHHHcCCCeEEEEeecCCCC--------
Confidence 4689999999999999666555 3221110 0111 1567778899999999998 778875 5454
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCC
Q 046395 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----------DLKLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 255 g~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p 323 (535)
+..+.+.+-++.+.+ . +-+.|-.+.+.-||..+ ..+.+.....+..+.+.+++.+=
T Consensus 179 -----------qt~e~~~~tl~~~~~-l-~p~~is~y~L~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~Gy 245 (400)
T PRK07379 179 -----------QTLEDWQASLEAAIA-L-NPTHLSCYDLVLEPGTAFGKQYQPGKAPLPSDETTAAMYRLAQEILTQAGY 245 (400)
T ss_pred -----------CCHHHHHHHHHHHHc-C-CCCEEEEecceecCCchhHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 234555555555554 2 23467778888888752 12345666778888888888776
Q ss_pred CcE
Q 046395 324 SAY 326 (535)
Q Consensus 324 ~~~ 326 (535)
.++
T Consensus 246 ~~y 248 (400)
T PRK07379 246 EHY 248 (400)
T ss_pred cee
Confidence 655
|
|
| >COG0635 HemN Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=89.21 E-value=3 Score=44.66 Aligned_cols=122 Identities=20% Similarity=0.181 Sum_probs=84.2
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~ 253 (535)
+.++.+-|+.+++.|+| ||+++-+.+-+.. -+. ....+....+++.+++.|+. |-+||- +.|+
T Consensus 133 ~~~~~e~~~~l~~~GvN--RiSlGVQsf~~~~lk~lgR---~h~~~~~~~a~~~~~~~g~~~in~DLIyglP~------- 200 (416)
T COG0635 133 GTVEAEKFKALKEAGVN--RISLGVQSFNDEVLKALGR---IHDEEEAKEAVELARKAGFTSINIDLIYGLPG------- 200 (416)
T ss_pred CCCCHHHHHHHHHcCCC--EEEeccccCCHHHHHHhcC---CCCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-------
Confidence 45678999999999999 8888875442211 010 11456677789999999986 668884 5553
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC----------CCChHHHHHHHHHHHHHHHhcCC
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP----------DLKLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p 323 (535)
++.+.+.+-++.+.+-- -+.|-.|.|.-||... -.+.+.-...++.+.+.+.+.+=
T Consensus 201 ------------QT~~~~~~~l~~a~~l~--pdhis~y~L~~~p~t~~~~~~~~~~~lP~~d~~~~~~~~~~e~L~~~Gy 266 (416)
T COG0635 201 ------------QTLESLKEDLEQALELG--PDHLSLYSLAIEPGTKFAQRKIKGKALPDEDEKADMYELVEELLEKAGY 266 (416)
T ss_pred ------------CCHHHHHHHHHHHHhCC--CCEEEEeeeecCCCchhhhhcccCCCCcChHHHHHHHHHHHHHHHHCCC
Confidence 45667777777766632 3478889999999863 12334566788888888888776
Q ss_pred CcE
Q 046395 324 SAY 326 (535)
Q Consensus 324 ~~~ 326 (535)
.++
T Consensus 267 ~~y 269 (416)
T COG0635 267 RQY 269 (416)
T ss_pred cEE
Confidence 444
|
|
| >PLN00196 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=89.08 E-value=1.2 Score=47.94 Aligned_cols=59 Identities=19% Similarity=0.206 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCEEEeCCccccc----cCCCCCCCCc---cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIA----YDPKPPKPFV---GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~----~~p~~~~~~~---~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.+..|+++|+++|=||=.+... ..+..-...+ -+..+.|+++|+.|+++||+||+|+
T Consensus 47 ~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDv 112 (428)
T PLN00196 47 MGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADI 112 (428)
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 577999999999999997433211 0111000011 1467889999999999999999998
|
|
| >TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase | Back alignment and domain information |
|---|
Probab=88.58 E-value=1.3 Score=49.23 Aligned_cols=56 Identities=14% Similarity=0.332 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.|+++|+++|=|.=-+.. +.....|. -+..+.|+++|+.|+++||+||+|+
T Consensus 30 ~~~l~yl~~lG~~~i~l~Pi~~~---~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~ 95 (543)
T TIGR02403 30 IEKLDYLKKLGVDYIWLNPFYVS---PQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDM 95 (543)
T ss_pred HHhHHHHHHcCCCEEEECCcccC---CCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 46688999999999987322211 11111121 1468999999999999999999998
|
Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor. |
| >cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins | Back alignment and domain information |
|---|
Probab=88.45 E-value=17 Score=37.03 Aligned_cols=144 Identities=8% Similarity=0.034 Sum_probs=83.7
Q ss_pred HHHHHHHHHcCCCEEEeCCcc--ccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCC----CC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGW--WIAYDPKP---PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGS----PH 253 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~--w~~~~p~~---~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~----~~ 253 (535)
++-++.|+..|+|.+=+-+.- ..-..|.- .+.| .-+.+.++++.|+++||.||..+-. ||....+ ..
T Consensus 20 k~~id~ma~~k~N~l~lhl~D~f~~~~~p~~~~~~~~y---T~~ei~ei~~yA~~~gI~vIPeid~-pGH~~~~l~~~~~ 95 (301)
T cd06565 20 KKLLRLLALLGANGLLLYYEDTFPYEGEPEVGRMRGAY---TKEEIREIDDYAAELGIEVIPLIQT-LGHLEFILKHPEF 95 (301)
T ss_pred HHHHHHHHHcCCCEEEEEEecceecCCCcccccCCCCc---CHHHHHHHHHHHHHcCCEEEecCCC-HHHHHHHHhCccc
Confidence 688899999999999874321 00001110 1224 5788999999999999999987743 2211000 00
Q ss_pred CCCCC-----C-CCCCChHHHHHHHHHHHHHHHHhCCCCcE-EEE-EeecCCCCC-------CCChHHHHHHHHHHHHHH
Q 046395 254 SGSRD-----G-FQEWSDSDIQETVAIIDFLASRYADHPSL-VAI-ELMNEPKAP-------DLKLDSLKTYYKAGYDTV 318 (535)
Q Consensus 254 sg~~~-----~-~~~W~~~~~~~~~~~~~~la~ry~~~p~V-~~~-el~NEP~~~-------~~~~~~~~~~~~~~~~aI 318 (535)
...++ + .+.-.++..+-..++++++++.|.. +.+ +|- |+.+-..+. ....+.+..|..++.+.+
T Consensus 96 ~~l~~~~~~~~~l~~~~~~t~~fi~~li~ev~~~f~s-~~~HIG~DE~~~~g~~~~~~~~~~~~~~~l~~~~~~~v~~~v 174 (301)
T cd06565 96 RHLREVDDPPQTLCPGEPKTYDFIEEMIRQVLELHPS-KYIHIGMDEAYDLGRGRSLRKHGNLGRGELYLEHLKKVLKII 174 (301)
T ss_pred ccccccCCCCCccCCCChhHHHHHHHHHHHHHHhCCC-CeEEECCCcccccCCCHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 00000 0 0111157777788888888888863 222 221 122211110 112356789999999999
Q ss_pred HhcCCCcEEEEcCC
Q 046395 319 RKYSSSAYVILSNR 332 (535)
Q Consensus 319 R~~~p~~~ii~~~~ 332 (535)
++.++ .++++++.
T Consensus 175 ~~~g~-~~~~W~D~ 187 (301)
T cd06565 175 KKRGP-KPMMWDDM 187 (301)
T ss_pred HHcCC-EEEEEhHH
Confidence 99987 55566553
|
GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >PRK05799 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=88.34 E-value=3.9 Score=42.99 Aligned_cols=122 Identities=16% Similarity=0.236 Sum_probs=77.5
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~ 253 (535)
..++++.++.|+++|+|.|-|+| ..+.+.. -+.. ...+.+.++++.+++.|+. |-+|+- +.||
T Consensus 95 ~~~t~e~l~~l~~~G~~rvsiGv--qS~~d~~L~~l~R~---~~~~~~~~ai~~l~~~g~~~v~~dli~GlPg------- 162 (374)
T PRK05799 95 GTFTEEKLKILKSMGVNRLSIGL--QAWQNSLLKYLGRI---HTFEEFLENYKLARKLGFNNINVDLMFGLPN------- 162 (374)
T ss_pred CcCCHHHHHHHHHcCCCEEEEEC--ccCCHHHHHHcCCC---CCHHHHHHHHHHHHHcCCCcEEEEeecCCCC-------
Confidence 45789999999999999655555 3322110 0111 1567788899999999997 667765 4443
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcC
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----------DLKLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~ 322 (535)
++.+.+.+.++.+.+. + -+.|-.|.+.-+|..+ ..+.+.....+..+.+.+.+.+
T Consensus 163 ------------qt~e~~~~~l~~~~~l-~-~~~is~y~l~~~pgT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~G 228 (374)
T PRK05799 163 ------------QTLEDWKETLEKVVEL-N-PEHISCYSLIIEEGTPFYNLYENGKLKLPDEEEEREMYHYTIEFLKEKG 228 (374)
T ss_pred ------------CCHHHHHHHHHHHHhc-C-CCEEEEeccEecCCCHHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcC
Confidence 3456666667766653 2 2356567777788642 1123455667777778887776
Q ss_pred CCcE
Q 046395 323 SSAY 326 (535)
Q Consensus 323 p~~~ 326 (535)
=.++
T Consensus 229 y~~y 232 (374)
T PRK05799 229 YHQY 232 (374)
T ss_pred CcEE
Confidence 5554
|
|
| >cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides | Back alignment and domain information |
|---|
Probab=88.32 E-value=24 Score=35.97 Aligned_cols=144 Identities=12% Similarity=0.158 Sum_probs=83.2
Q ss_pred hHHHHHHHHHcCCCEEEeCCc----cccccC--CC------------CCCCCccchHHHHHHHHHHHHHcCCEEEEecCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVG----WWIAYD--PK------------PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA 243 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~----~w~~~~--p~------------~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~ 243 (535)
.++-++.|+..++|.+-+-+. |-.-.. |. +++.| ..+.+.++++.|+++||.||..+-.
T Consensus 18 lk~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~y---T~~di~elv~yA~~rgI~viPEiD~ 94 (303)
T cd02742 18 IKRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFY---TYAQLKDIIEYAAARGIEVIPEIDM 94 (303)
T ss_pred HHHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeE---CHHHHHHHHHHHHHcCCEEEEeccc
Confidence 367888999999999988664 211001 11 11223 5688999999999999999977632
Q ss_pred C----------CCCC-CCCCCCCCC--CCC-CCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHH
Q 046395 244 L----------RVSQ-NGSPHSGSR--DGF-QEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKT 309 (535)
Q Consensus 244 ~----------pg~~-ng~~~sg~~--~~~-~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~ 309 (535)
. |.-. ......... .+. +.=.++..+-..++++++++.|...---+|= -|........+.+..
T Consensus 95 PGH~~a~~~~~p~l~~~~~~~~~~~~~~~~l~~~~~~t~~fl~~l~~e~~~lf~~~~iHiGg---DE~~~~~~~~~l~~~ 171 (303)
T cd02742 95 PGHSTAFVKSFPKLLTECYAGLKLRDVFDPLDPTLPKGYDFLDDLFGEIAELFPDRYLHIGG---DEAHFKQDRKHLMSQ 171 (303)
T ss_pred hHHHHHHHHhCHHhccCccccCCCCCCCCccCCCCccHHHHHHHHHHHHHHhCCCCeEEecc---eecCCCCCHHHHHHH
Confidence 1 1100 000000000 000 1111567778888999999888542111221 122111123456788
Q ss_pred HHHHHHHHHHhcCCCcEEEEcCC
Q 046395 310 YYKAGYDTVRKYSSSAYVILSNR 332 (535)
Q Consensus 310 ~~~~~~~aIR~~~p~~~ii~~~~ 332 (535)
|.+++.+.+++.+ ..++++++.
T Consensus 172 f~~~~~~~v~~~g-~~~~~W~d~ 193 (303)
T cd02742 172 FIQRVLDIVKKKG-KKVIVWQDG 193 (303)
T ss_pred HHHHHHHHHHHcC-CeEEEeccc
Confidence 8899999999987 455566543
|
These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself. |
| >TIGR01212 radical SAM protein, TIGR01212 family | Back alignment and domain information |
|---|
Probab=88.23 E-value=3.8 Score=41.87 Aligned_cols=127 Identities=19% Similarity=0.236 Sum_probs=75.7
Q ss_pred CccchHHHHHHHHH---cCCCEEEeCCccccccCCCCCCCCcc-chHHHHHHHHHHHHHcCCEEEEecC-CCCCCCCCCC
Q 046395 178 KSYITEEDFKFMSQ---NGLNAVRIPVGWWIAYDPKPPKPFVG-GSLQALDNAFRWAQKYGMKVIVDLH-ALRVSQNGSP 252 (535)
Q Consensus 178 ~~~ite~D~~~ik~---~G~N~VRipv~~w~~~~p~~~~~~~~-~~l~~ld~~i~~a~~~Gi~VIldlH-~~pg~~ng~~ 252 (535)
...++++.++.|++ .|++ +||-++.+...+..- ..... ...+.+.++++.++++||.|.+++- +.||
T Consensus 118 pd~l~~e~l~~L~~l~~~G~~-~~i~lGlQS~~d~~L-~~i~Rg~t~~~~~~ai~~l~~~gi~v~~~lI~GlPg------ 189 (302)
T TIGR01212 118 PDCVPDEVLDLLAEYVERGYE-VWVELGLQTAHDKTL-KKINRGHDFACYVDAVKRARKRGIKVCSHVILGLPG------ 189 (302)
T ss_pred CCcCCHHHHHHHHHhhhCCce-EEEEEccCcCCHHHH-HHHcCcChHHHHHHHHHHHHHcCCEEEEeEEECCCC------
Confidence 34566777777664 5885 344444332211100 00011 1467778899999999999887654 4343
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC--------CCChHHHHHHHHHHHHHHHhcCCC
Q 046395 253 HSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP--------DLKLDSLKTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 253 ~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~--------~~~~~~~~~~~~~~~~aIR~~~p~ 324 (535)
+..+.+.+.++.+.+.--+ .|..+.+.-+|..+ ......+..|+..+...++.+.++
T Consensus 190 -------------et~e~~~~t~~~l~~l~~d--~i~i~~l~~~pgT~L~~~~~~g~~~~~~~~e~~~~~~~~l~~l~~~ 254 (302)
T TIGR01212 190 -------------EDREEMMETAKIVSLLDVD--GIKIHPLHVVKGTKMAKMYEKGELKTLSLEEYISLACDFLEHLPPE 254 (302)
T ss_pred -------------CCHHHHHHHHHHHHhcCCC--EEEEEEEEecCCCHHHHHHHcCCCCCCCHHHHHHHHHHHHHhCCcC
Confidence 3446666666666552223 56667788888752 112234577888888999988887
Q ss_pred cEE
Q 046395 325 AYV 327 (535)
Q Consensus 325 ~~i 327 (535)
..|
T Consensus 255 ~~i 257 (302)
T TIGR01212 255 VVI 257 (302)
T ss_pred eEE
Confidence 654
|
This uncharacterized protein family shows significant similarity to TIGR01211, a longer protein that is a histone acetyltransferase at its C-terminus and is a subunit of RNA polymerase II (in yeast). This family lacks the GNAT acetyltransferase domain. |
| >PRK05904 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=88.20 E-value=4.4 Score=42.43 Aligned_cols=123 Identities=13% Similarity=0.171 Sum_probs=79.0
Q ss_pred CccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCC
Q 046395 178 KSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSP 252 (535)
Q Consensus 178 ~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~ 252 (535)
+..++++.++.|++.|+|.|=|+|- .+.+.. -+.. ...+.+.++++.|+++|+. |-+|+- +.||
T Consensus 98 P~~lt~e~l~~lk~~G~nrisiGvQ--S~~d~vL~~l~R~---~~~~~~~~ai~~lr~~G~~~v~~dlI~GlPg------ 166 (353)
T PRK05904 98 PELITQSQINLLKKNKVNRISLGVQ--SMNNNILKQLNRT---HTIQDSKEAINLLHKNGIYNISCDFLYCLPI------ 166 (353)
T ss_pred cCcCCHHHHHHHHHcCCCEEEEecc--cCCHHHHHHcCCC---CCHHHHHHHHHHHHHcCCCcEEEEEeecCCC------
Confidence 3467899999999999997766553 221110 0111 2567788899999999997 778874 5453
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC------CCChHHHHHHHHHHHHHHHhcCCCcE
Q 046395 253 HSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP------DLKLDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 253 ~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~------~~~~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
+..+.+.+.++.+.+ .+- +.|..+.+.=||..+ ..+.+.-.+.++.+.+.+++.+-.++
T Consensus 167 -------------qt~e~~~~tl~~~~~-l~p-~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~y 231 (353)
T PRK05904 167 -------------LKLKDLDEVFNFILK-HKI-NHISFYSLEIKEGSILKKYHYTIDEDKEAEQLNYIKAKFNKLNYKRY 231 (353)
T ss_pred -------------CCHHHHHHHHHHHHh-cCC-CEEEEEeeEecCCChHhhcCCCCChHHHHHHHHHHHHHHHHcCCcEE
Confidence 344556666665554 221 255556666677632 12344556677888888888877665
|
|
| >PLN02361 alpha-amylase | Back alignment and domain information |
|---|
Probab=88.10 E-value=1.4 Score=46.97 Aligned_cols=64 Identities=20% Similarity=0.416 Sum_probs=44.4
Q ss_pred hhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCC---C--c--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKP---F--V--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 175 ~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~---~--~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+|..- ++.++.|+++|+++|=||=..... .+....+ | + -+..+.|+.+|+.|+++||+||+|+
T Consensus 26 ~~w~~i--~~kl~~l~~lG~t~iwl~P~~~~~-~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 26 DWWRNL--EGKVPDLAKSGFTSAWLPPPSQSL-APEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHHH--HHHHHHHHHcCCCEEEeCCCCcCC-CCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 356433 677899999999999986543211 1100001 1 1 1467899999999999999999999
|
|
| >PRK06294 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=87.94 E-value=4.7 Score=42.44 Aligned_cols=122 Identities=15% Similarity=0.178 Sum_probs=79.8
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~ 253 (535)
..++++.++.|+++|+|.|-|.|- .+-+.. -+.. -..+.+.++++.|++.|+. |-+||- +.||
T Consensus 99 ~~~~~~~l~~l~~~G~nrislGvQ--S~~~~~L~~l~R~---~~~~~~~~ai~~~~~~g~~~v~~Dli~GlPg------- 166 (370)
T PRK06294 99 ENLSESYIRALALTGINRISIGVQ--TFDDPLLKLLGRT---HSSSKAIDAVQECSEHGFSNLSIDLIYGLPT------- 166 (370)
T ss_pred CCCCHHHHHHHHHCCCCEEEEccc--cCCHHHHHHcCCC---CCHHHHHHHHHHHHHcCCCeEEEEeecCCCC-------
Confidence 456799999999999997766553 221110 0111 1456777899999999996 778875 4443
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcC
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----------DLKLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~ 322 (535)
+..+.+.+.++.+.+ ++ -+.|-.|.+.=||..+ ....+.....++.+.+.+.+.+
T Consensus 167 ------------qt~~~~~~~l~~~~~-l~-~~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~G 232 (370)
T PRK06294 167 ------------QSLSDFIVDLHQAIT-LP-ITHISLYNLTIDPHTSFYKHRKRLLPSIADEEILAEMSLAAEELLTSQG 232 (370)
T ss_pred ------------CCHHHHHHHHHHHHc-cC-CCeEEEeeeEecCCChHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHcC
Confidence 345566666666665 22 2367778888888742 1133556678888888888877
Q ss_pred CCcE
Q 046395 323 SSAY 326 (535)
Q Consensus 323 p~~~ 326 (535)
=.++
T Consensus 233 y~~y 236 (370)
T PRK06294 233 FTRY 236 (370)
T ss_pred CCee
Confidence 6555
|
|
| >TIGR00539 hemN_rel putative oxygen-independent coproporphyrinogen III oxidase | Back alignment and domain information |
|---|
Probab=87.92 E-value=4.2 Score=42.62 Aligned_cols=123 Identities=18% Similarity=0.143 Sum_probs=75.1
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc-cchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV-GGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPHSG 255 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~-~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~sg 255 (535)
..++++.++.|+++|+|.|-|.|- .+ ++.--.... ....+.+.++++.+++.|+. |-+|+- +.|+
T Consensus 96 ~~lt~e~l~~l~~~Gv~risiGvq--S~-~~~~l~~lgR~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg--------- 163 (360)
T TIGR00539 96 ELITAEWCKGLKGAGINRLSLGVQ--SF-RDDKLLFLGRQHSAKNIAPAIETALKSGIENISLDLMYGLPL--------- 163 (360)
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc--cC-ChHHHHHhCCCCCHHHHHHHHHHHHHcCCCeEEEeccCCCCC---------
Confidence 457899999999999997766653 22 111000010 12577888899999999996 668875 3343
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCCCc
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-------DLKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
++.+.+.+.++.+.+ .+ -+.|..+.+.=||..+ ....+.....+..+.+.+++.+=.+
T Consensus 164 ----------qt~~~~~~~l~~~~~-l~-~~~is~y~l~~~~gT~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 228 (360)
T TIGR00539 164 ----------QTLNSLKEELKLAKE-LP-INHLSAYALSVEPNTNFEKNAKKLPDDDSCAHFDEVVREILEGFGFKQ 228 (360)
T ss_pred ----------CCHHHHHHHHHHHHc-cC-CCEEEeecceEcCCChhhhhhhcCcCHHHHHHHHHHHHHHHHHcCCce
Confidence 345566666666655 22 1255556666677642 1123455666777777777755433
|
Experimentally determined examples of oxygen-independent coproporphyrinogen III oxidase, an enzyme that replaces HemF function under anaerobic conditions, belong to a family of proteins described by the model hemN. This model, hemN_rel, models a closely related protein, shorter at the amino end and lacking the region containing the motif PYRT[SC]YP found in members of the hemN family. Several species, including E. coli, Helicobacter pylori, Aquifex aeolicus, and Chlamydia trachomatis, have members of both this family and the E. coli hemN family. The member of this family from Bacillus subtilis was shown to complement an hemF/hemN double mutant of Salmonella typimurium and to prevent accumulation of coproporphyrinogen III under anaerobic conditions, but the exact role of this protein is still uncertain. It is found in a number of species that do not synthesize heme de novo. |
| >PRK09505 malS alpha-amylase; Reviewed | Back alignment and domain information |
|---|
Probab=87.58 E-value=1.6 Score=49.66 Aligned_cols=59 Identities=20% Similarity=0.287 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccc-------------------cCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIA-------------------YDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~-------------------~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.|+++|+|+|=|+=.+... ..+......++ +..+.|+++|+.|+++||+||+|+
T Consensus 233 ~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 312 (683)
T PRK09505 233 TEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRILFDV 312 (683)
T ss_pred HHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 355899999999999873211110 00000000111 468899999999999999999998
|
|
| >PRK08208 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=87.39 E-value=3.5 Score=44.32 Aligned_cols=122 Identities=17% Similarity=0.236 Sum_probs=76.9
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEE-EecC-CCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMKVI-VDLH-ALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~VI-ldlH-~~pg~~ng~~~ 253 (535)
..++++.++.|+++|+|.|-|+|-- +.+.. -+.. ...+.+.++++.++++|+.+| +|+- +.|+
T Consensus 137 ~~lt~e~l~~l~~~G~~rvslGvQS--~~~~~L~~l~R~---~~~~~~~~ai~~l~~~g~~~i~~dlI~GlP~------- 204 (430)
T PRK08208 137 ATTTAEKLALLAARGVNRLSIGVQS--FHDSELHALHRP---QKRADVHQALEWIRAAGFPILNIDLIYGIPG------- 204 (430)
T ss_pred CcCCHHHHHHHHHcCCCEEEEeccc--CCHHHHHHhCCC---CCHHHHHHHHHHHHHcCCCeEEEEeecCCCC-------
Confidence 4578999999999999977776632 21110 0111 156788899999999999864 7764 4443
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----CCChHHHHHHHHHHHHHHHhcCCCcE
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----DLKLDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----~~~~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
+..+.+.+.++.+.+ .+ -+.|-.+.+.=||..+ ....+.....++.+.+.+.+.+=.++
T Consensus 205 ------------qt~e~~~~~l~~~~~-l~-~~~is~y~L~~~~~T~l~~~~~~~~~~~~~m~~~~~~~L~~~Gy~~y 268 (430)
T PRK08208 205 ------------QTHASWMESLDQALV-YR-PEELFLYPLYVRPLTGLGRRARAWDDQRLSLYRLARDLLLEAGYTQT 268 (430)
T ss_pred ------------CCHHHHHHHHHHHHh-CC-CCEEEEccccccCCCccchhcCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 344555555555554 22 2356667777777642 11235566777777777777664443
|
|
| >PRK05660 HemN family oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=87.26 E-value=5 Score=42.38 Aligned_cols=122 Identities=19% Similarity=0.200 Sum_probs=77.4
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEE-EEecC-CCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMKV-IVDLH-ALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~V-IldlH-~~pg~~ng~~~ 253 (535)
..++++.++.|+++|+|.|-|.|- .+.+.. -+. ....+...++++.|++.|+.. -+|+- +.||
T Consensus 103 ~~l~~e~l~~Lk~~Gv~risiGvq--S~~~~~L~~l~r---~~~~~~~~~ai~~~~~~G~~~v~~dli~Glpg------- 170 (378)
T PRK05660 103 GTVEADRFVGYQRAGVNRISIGVQ--SFSEEKLKRLGR---IHGPDEAKRAAKLAQGLGLRSFNLDLMHGLPD------- 170 (378)
T ss_pred CcCCHHHHHHHHHcCCCEEEeccC--cCCHHHHHHhCC---CCCHHHHHHHHHHHHHcCCCeEEEEeecCCCC-------
Confidence 457789999999999996666552 221100 011 125677888999999999975 48775 4343
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCCCcE
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-------DLKLDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
++.+.+.+.++.+.+--- +.|-.|.+.=||..+ -...+.....++.+.+.+.+.+=.++
T Consensus 171 ------------qt~~~~~~~l~~~~~l~p--~~is~y~l~~~~gT~l~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~y 236 (378)
T PRK05660 171 ------------QSLEEALDDLRQAIALNP--PHLSWYQLTIEPNTLFGSRPPVLPDDDALWDIFEQGHQLLTAAGYQQY 236 (378)
T ss_pred ------------CCHHHHHHHHHHHHhcCC--CeEEeeccEeccCCcccccCCCCcCHHHHHHHHHHHHHHHHHcCCcEe
Confidence 355666666666665222 366667777777632 01234556677788888888765554
|
|
| >PRK10933 trehalose-6-phosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=87.18 E-value=1.8 Score=48.14 Aligned_cols=55 Identities=20% Similarity=0.469 Sum_probs=39.7
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.|+++|+++|=| |+. .. |.....|+ -+..+.|+++|+.|+++||+||+|+
T Consensus 36 ~~~ldyl~~lGv~~i~l~P~~-~~---~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~ 101 (551)
T PRK10933 36 TQRLDYLQKLGVDAIWLTPFY-VS---PQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDM 101 (551)
T ss_pred HHhhHHHHhCCCCEEEECCCC-CC---CCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 36689999999999987 432 11 11000121 1467899999999999999999999
|
|
| >PF07468 Agglutinin: Agglutinin; InterPro: IPR008998 Agglutinins are sugar-specific lectins that can agglutinate erythrocytes and other cell types | Back alignment and domain information |
|---|
Probab=87.08 E-value=7.8 Score=35.18 Aligned_cols=100 Identities=14% Similarity=0.137 Sum_probs=67.0
Q ss_pred EEEEeecCcEEEEec--CCCce-EEeccCCCCCCCCceeEEEE--ecCCeEEEEee-CCcEEEeecCCC--eEEEeccCC
Q 046395 21 QLISTKLKKYLTAEN--GSETI-LMANHNSSSTSSWQTFRLWR--INETFYNFRLS-NKQFIGLENQGN--KLVAVSATE 92 (535)
Q Consensus 21 ~~~~~~~~~~~~a~~--~g~~~-~~anr~~~~~~~we~f~~~~--~~~~~~~~~~~-~~~~v~~~~~~~--~~~a~~~~~ 92 (535)
-++|=-|||||++-. +..-. |--+-+.+ ..++-.|++.. ..++.+.+|.. +++|..... ++ -+.|.++.|
T Consensus 8 V~fkg~N~kYLry~~e~~~~~~~LqF~~edi-~dP~v~fev~~~~~~dG~V~Ir~~y~nKfWrr~s-~n~~WI~ada~~p 85 (153)
T PF07468_consen 8 VAFKGDNGKYLRYRTEDIQQYGYLQFSGEDI-GDPYVKFEVEPSKTHDGLVHIRCCYNNKFWRRSS-PNDYWIWADADDP 85 (153)
T ss_dssp EEEETTTS-EEEEEESSCTTCCEEEEEESST-T-CCG-EEEEE-SSTTT-EEEEETTTTEEEEESC-CC--BEEEEESSH
T ss_pred EEEEcCCCcEEEEEecccccceeEEecCCcC-CCCceeEEEEEcccCCCeEEEEeccCCceeEeCC-CCCcEEEecCCCc
Confidence 456688999999876 33222 44444444 26999999999 88999999964 999998754 44 588887776
Q ss_pred C-----CCCc-eEEEecC-CCCceeEEEecC-CceEEE
Q 046395 93 K-----FPEP-FQITRKN-GEPHRVRFRASN-GYFLQA 122 (535)
Q Consensus 93 ~-----~~e~-f~~~~~~-~~~~~v~I~~~n-G~flq~ 122 (535)
. +..| |+-|+-+ ++...|+++... |.|.+-
T Consensus 86 ~ed~s~~~cTLF~Pv~vd~~~~~~i~l~~~~n~~~~~r 123 (153)
T PF07468_consen 86 DEDQSKPSCTLFEPVKVDVKDFNVIALRNMQNGHFCKR 123 (153)
T ss_dssp HH-TCSTCGG-EEEEESCCCETTEEEEEETTTTEEEEE
T ss_pred ccccCCCCceEEEEEEecCCCccEEEEEecCCceEEEE
Confidence 4 3677 9977643 445578888755 777754
|
Lectins occur widely in plants, as well as some microorganisms and animal []. Agglutinin from Amaranthus caudatus (amaranthin) is a lectin from the ancient South American crop, amaranth grain. Although its biological function is unknown, it can agglutinate A, B and O red blood cells, and has a carbohydrate-binding site that is specific for the methyl-glycoside of the T-antigen found linked to serine or threonine residues of cell surface glycoproteins []. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains []. Lectin B chains from ricin and related toxins also contain beta-trefoil domain, however they are not related to agglutinin, showing little sequence similarity [].; PDB: 1JLY_B 1JLX_B. |
| >PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional | Back alignment and domain information |
|---|
Probab=86.64 E-value=1.4 Score=53.52 Aligned_cols=59 Identities=24% Similarity=0.446 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccc--------------cCCC----CCCCCccchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIA--------------YDPK----PPKPFVGGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~--------------~~p~----~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++.++.||++|+|+|=| ||.-..- .++. +...|-.+..+.++++|+.|+++||+||||+
T Consensus 190 ~~~i~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~yWGY~~~~yfa~dp~yg~~~~~efk~lV~~~H~~GI~VILDv 267 (1221)
T PRK14510 190 PEAISYLKKLGVSIVELNPIFASVDEHHLPQLGLSNYWGYNTVAFLAPDPRLAPGGEEEFAQAIKEAQSAGIAVILDV 267 (1221)
T ss_pred chhHHHHHHcCCCEEEeCCccccCcccccccccCcCcCCCCCCCCCCcChhhccCcHHHHHHHHHHHHHCCCEEEEEE
Confidence 46688999999999987 5532110 0110 0001211267899999999999999999998
|
|
| >cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins | Back alignment and domain information |
|---|
Probab=86.63 E-value=17 Score=37.45 Aligned_cols=142 Identities=12% Similarity=0.155 Sum_probs=83.5
Q ss_pred hHHHHHHHHHcCCCEEEeCCcc-ccc-cC--CC-----------------------CCCCCccchHHHHHHHHHHHHHcC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGW-WIA-YD--PK-----------------------PPKPFVGGSLQALDNAFRWAQKYG 234 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~-w~~-~~--p~-----------------------~~~~~~~~~l~~ld~~i~~a~~~G 234 (535)
.++-++.|+..++|.+-+-+.= |.+ .+ |. .++.| ..+.++++++.|+++|
T Consensus 19 ik~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~Y---T~~di~eiv~yA~~rg 95 (326)
T cd06564 19 LKDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYY---TKEEFKELIAYAKDRG 95 (326)
T ss_pred HHHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcc---cHHHHHHHHHHHHHcC
Confidence 4788888999999999874421 111 00 10 11123 5788999999999999
Q ss_pred CEEEEecCCCCCCCCCC-----------CCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCC-CCcE-EE-EEeecCCCC
Q 046395 235 MKVIVDLHALRVSQNGS-----------PHSGSRDGFQEWS-DSDIQETVAIIDFLASRYAD-HPSL-VA-IELMNEPKA 299 (535)
Q Consensus 235 i~VIldlH~~pg~~ng~-----------~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~-~p~V-~~-~el~NEP~~ 299 (535)
|.||..+-. ||....+ .......+..... ++..+-..++++++++.|.. .+.| +| =|+.+.
T Consensus 96 I~vIPEID~-PGH~~a~~~~~pel~~~~~~~~~~~~~l~~~~~~t~~f~~~l~~E~~~~f~~~~~~~HiGgDE~~~~--- 171 (326)
T cd06564 96 VNIIPEIDS-PGHSLAFTKAMPELGLKNPFSKYDKDTLDISNPEAVKFVKALFDEYLDGFNPKSDTVHIGADEYAGD--- 171 (326)
T ss_pred CeEeccCCC-cHHHHHHHHhhHHhcCCCcccCCCcccccCCCHHHHHHHHHHHHHHHHhcCCCCCEEEecccccccc---
Confidence 999976632 2111000 0000000111111 66777788888999988873 2322 11 122222
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCC
Q 046395 300 PDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR 332 (535)
Q Consensus 300 ~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~ 332 (535)
....+.+..|..++.+.|++.+. .++++.+.
T Consensus 172 -~~~~~~~~~f~~~~~~~v~~~gk-~~~~W~d~ 202 (326)
T cd06564 172 -AGYAEAFRAYVNDLAKYVKDKGK-TPRVWGDG 202 (326)
T ss_pred -CccHHHHHHHHHHHHHHHHHcCC-eEEEeCCc
Confidence 23456788999999999999854 45566543
|
Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. |
| >TIGR02456 treS_nterm trehalose synthase | Back alignment and domain information |
|---|
Probab=86.62 E-value=1.8 Score=47.96 Aligned_cols=56 Identities=20% Similarity=0.376 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCC--------cc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPF--------VG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~--------~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.|+++|+|+|=|.=-+.. +.....| ++ +..+.++++|+.|+++||+||+|+
T Consensus 31 ~~~Ldyl~~LGv~~i~L~Pi~~~---~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~ 96 (539)
T TIGR02456 31 TSKLDYLKWLGVDALWLLPFFQS---PLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDL 96 (539)
T ss_pred HHhHHHHHHCCCCEEEECCCcCC---CCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35689999999999987321111 1000112 11 467899999999999999999998
|
Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530). |
| >PRK09057 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=86.40 E-value=5.4 Score=42.14 Aligned_cols=122 Identities=18% Similarity=0.085 Sum_probs=77.9
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEecC-CCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH-ALRVSQNGSPHS 254 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH-~~pg~~ng~~~s 254 (535)
..++++.++.|+++|+|.|-|.| ..+.+.. -+... ..+.+.++++++++.++.|-+|+- +.||
T Consensus 100 ~~i~~e~L~~l~~~GvnrislGv--QS~~d~vL~~l~R~~---~~~~~~~ai~~~~~~~~~v~~dli~GlPg-------- 166 (380)
T PRK09057 100 TSVEAGRFRGYRAAGVNRVSLGV--QALNDADLRFLGRLH---SVAEALAAIDLAREIFPRVSFDLIYARPG-------- 166 (380)
T ss_pred CcCCHHHHHHHHHcCCCEEEEec--ccCCHHHHHHcCCCC---CHHHHHHHHHHHHHhCccEEEEeecCCCC--------
Confidence 45778999999999999666655 2222110 01111 456677788999988999999985 4443
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCC
Q 046395 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----------DLKLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 255 g~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p 323 (535)
+..+.+.+-++.+.+ + +-+.|..+.+.=||..+ ..+.+.....++.+.+.+++.+-
T Consensus 167 -----------qt~~~~~~~l~~~~~-l-~p~~is~y~L~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~L~~~G~ 233 (380)
T PRK09057 167 -----------QTLAAWRAELKEALS-L-AADHLSLYQLTIEEGTAFYGLHAAGKLILPDEDLAADLYELTQEITAAAGL 233 (380)
T ss_pred -----------CCHHHHHHHHHHHHh-c-CCCeEEeecceecCCChHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCC
Confidence 234445555555554 3 33467778888888742 12334556778888888887765
Q ss_pred CcE
Q 046395 324 SAY 326 (535)
Q Consensus 324 ~~~ 326 (535)
.++
T Consensus 234 ~~y 236 (380)
T PRK09057 234 PAY 236 (380)
T ss_pred chh
Confidence 433
|
|
| >PRK13347 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=85.95 E-value=4.5 Score=43.82 Aligned_cols=123 Identities=15% Similarity=0.116 Sum_probs=75.2
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc-cchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV-GGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPHSG 255 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~-~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~sg 255 (535)
..++++.++.|+++|+|.|-|.|- .+ ++.--.... ....+.+.++++.+++.|+. |-+|+- +.||
T Consensus 148 ~~lt~e~l~~L~~~G~~rvsiGvQ--S~-~~~vl~~l~R~~~~~~~~~ai~~lr~~G~~~v~~dli~GlPg--------- 215 (453)
T PRK13347 148 RTVTAEMLQALAALGFNRASFGVQ--DF-DPQVQKAINRIQPEEMVARAVELLRAAGFESINFDLIYGLPH--------- 215 (453)
T ss_pred ccCCHHHHHHHHHcCCCEEEECCC--CC-CHHHHHHhCCCCCHHHHHHHHHHHHhcCCCcEEEeEEEeCCC---------
Confidence 457899999999999997666552 22 111000000 12577888999999999996 777764 4443
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC----------CCChHHHHHHHHHHHHHHHhcCCCc
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP----------DLKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
++.+.+.+.++.+.+.=-+ .|..+.+...|... -.+.+.....++.+.+.+.+.+=.+
T Consensus 216 ----------qt~e~~~~tl~~~~~l~p~--~i~~y~l~~~p~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~ 283 (453)
T PRK13347 216 ----------QTVESFRETLDKVIALSPD--RIAVFGYAHVPSRRKNQRLIDEAALPDAEERLRQARAVADRLLAAGYVP 283 (453)
T ss_pred ----------CCHHHHHHHHHHHHhcCCC--EEEEeccccccchhhHHhcCCccCCcCHHHHHHHHHHHHHHHHHCCCEE
Confidence 3556666666666652222 45445555555421 1123455667777778887766443
|
|
| >PRK08599 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=85.42 E-value=5.8 Score=41.77 Aligned_cols=122 Identities=21% Similarity=0.222 Sum_probs=76.6
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCC---CCCCCCccchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDP---KPPKPFVGGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p---~~~~~~~~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~ 253 (535)
..++++.++.|+++|+|.|-|+|-- +-+. .-+.. ...+.+.++++.+++.|+. |-+|+- +.||
T Consensus 96 ~~l~~e~l~~l~~~G~~rvsiGvqS--~~~~~l~~l~r~---~~~~~~~~~i~~l~~~g~~~v~~dli~GlPg------- 163 (377)
T PRK08599 96 GDLTKEKLQVLKDSGVNRISLGVQT--FNDELLKKIGRT---HNEEDVYEAIANAKKAGFDNISIDLIYALPG------- 163 (377)
T ss_pred CCCCHHHHHHHHHcCCCEEEEeccc--CCHHHHHHcCCC---CCHHHHHHHHHHHHHcCCCcEEEeeecCCCC-------
Confidence 4578999999999999977776632 2110 00111 2567888999999999997 567764 4443
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcC
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----------DLKLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~ 322 (535)
++.+.+.+.++.+.+ .+ -+.|..+.+.-+|..+ ..+.+...+.++.+.+.+++.+
T Consensus 164 ------------qt~~~~~~~l~~~~~-l~-~~~i~~y~l~~~pgT~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~G 229 (377)
T PRK08599 164 ------------QTIEDFKESLAKALA-LD-IPHYSAYSLILEPKTVFYNLMRKGKLRLPGEDLEAEMYEYLMDEMEAHG 229 (377)
T ss_pred ------------CCHHHHHHHHHHHHc-cC-CCEEeeeceeecCCChhHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 344555555555544 32 2356667777788642 0123455667777888888776
Q ss_pred CCcE
Q 046395 323 SSAY 326 (535)
Q Consensus 323 p~~~ 326 (535)
=.++
T Consensus 230 y~~~ 233 (377)
T PRK08599 230 FHQY 233 (377)
T ss_pred CcEe
Confidence 5443
|
|
| >KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.20 E-value=4.3 Score=45.64 Aligned_cols=59 Identities=19% Similarity=0.390 Sum_probs=41.7
Q ss_pred chHHHHHHHHHcCCCEEEe-CCccc-c-----------ccCCCCCCCCc----cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 181 ITEEDFKFMSQNGLNAVRI-PVGWW-I-----------AYDPKPPKPFV----GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRi-pv~~w-~-----------~~~p~~~~~~~----~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++++++..||.+|+|+|-| |+.-. . ++-|. ..|- ......++.+|+.|.+.||.|+||+
T Consensus 256 FteKvlphlK~LG~NaiqLmpi~Ef~~~~~s~GY~~~nFFaps--srYgt~~s~~ri~efK~lVd~aHs~GI~VlLDV 331 (757)
T KOG0470|consen 256 FTEKVLPHLKKLGYNAIQLMPIFEFGHYYASWGYQVTNFFAPS--SRYGTPESPCRINEFKELVDKAHSLGIEVLLDV 331 (757)
T ss_pred hhhhhhhHHHHhCccceEEeehhhhhhhhhccCcceeEeeccc--ccccCCCcccchHHHHHHHHHHhhCCcEEehhh
Confidence 4688899999999999997 44211 0 01111 0111 1237789999999999999999998
|
|
| >PF00167 FGF: Fibroblast growth factor; InterPro: IPR002348 The interleukin-1 (IL1) and heparin-binding growth factor (HBGF) families share low sequence similarity (about 25% []) but have very similar structures | Back alignment and domain information |
|---|
Probab=85.02 E-value=11 Score=32.73 Aligned_cols=74 Identities=12% Similarity=0.200 Sum_probs=57.9
Q ss_pred eeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEe-eCCcEEEeecCCCeEEEeccCCCCCCc
Q 046395 19 QVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRL-SNKQFIGLENQGNKLVAVSATEKFPEP 97 (535)
Q Consensus 19 ~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~a~~~~~~~~e~ 97 (535)
.+||=+-. |+||+....| .|.+.++.- +....|.+..++.+.+.+|. ..+.|+|++. .|.|.+.. .+...-.
T Consensus 2 ~~~Ly~~~-~~~L~i~~~g--~V~gt~~~~--~~~s~~~i~~~~~g~V~i~~~~s~~YLcmn~-~G~ly~~~-~~~~~C~ 74 (122)
T PF00167_consen 2 HVQLYCRT-GYFLQINPNG--TVDGTGDDN--SPYSVFEIHSVGFGVVRIRGVKSCRYLCMNK-CGRLYGSK-NFNKDCV 74 (122)
T ss_dssp EEEEEETT-SEEEEEETTS--BEEEESSTT--STTGEEEEEEEETTEEEEEETTTTEEEEEBT-TSBEEEES-SBTGGGE
T ss_pred CEEEEECC-CeEEEECCCC--eEeCCCCcC--cceeEEEEEeccceEEEEEEecceEEEEECC-CCeEcccc-ccCCCce
Confidence 46777555 9999987654 777778877 88899999999999999994 4899999997 78888854 4544555
Q ss_pred eE
Q 046395 98 FQ 99 (535)
Q Consensus 98 f~ 99 (535)
|.
T Consensus 75 F~ 76 (122)
T PF00167_consen 75 FR 76 (122)
T ss_dssp EE
T ss_pred EE
Confidence 54
|
Coupled with the Kunitz-type soybean trypsin inhibitors (STI), they form a structural superfamily. Despite their structural correspondence, however, they show no sequence similarity to the STI family. The crystal structures of interleukin-1 beta and HBGF1 have been solved, showing both families to have the same 12-stranded beta-sheet structure []; the beta-sheets are arranged in 3 similar lobes around a central axis, 6 strands forming an anti-parallel beta-barrel [, ]. The beta-sheets are generally well preserved and the crystal structures superimpose in these areas. The intervening loops are less well conserved - the loop between beta-strands 6 and 7 is slightly longer in interleukin-1 beta.; GO: 0008083 growth factor activity; PDB: 1AFC_F 1BAR_A 2P39_A 1EV2_D 2BFH_A 4FGF_A 1BAS_A 1BFG_A 1FQ9_B 1CVS_A .... |
| >PRK09058 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=84.33 E-value=12 Score=40.64 Aligned_cols=122 Identities=12% Similarity=0.024 Sum_probs=79.9
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcC-CEEEEecC-CCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYG-MKVIVDLH-ALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~G-i~VIldlH-~~pg~~ng~~~ 253 (535)
..++++.++.|++.|+|.|-|.|- .+.+.. -+. ....+.+.++++.++++| +.|.+||- +.||
T Consensus 159 ~~~t~e~l~~l~~aGvnRiSiGVQ--Sf~d~vLk~lgR---~~~~~~~~~~i~~l~~~g~~~v~~DlI~GlPg------- 226 (449)
T PRK09058 159 NGFDDEKADAALDAGANRFSIGVQ--SFNTQVRRRAGR---KDDREEVLARLEELVARDRAAVVCDLIFGLPG------- 226 (449)
T ss_pred CcCCHHHHHHHHHcCCCEEEecCC--cCCHHHHHHhCC---CCCHHHHHHHHHHHHhCCCCcEEEEEEeeCCC-------
Confidence 346799999999999997777663 221100 011 114567778899999999 78999985 5453
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----------CC-ChHHHHHHHHHHHHHHHhc
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----------DL-KLDSLKTYYKAGYDTVRKY 321 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----------~~-~~~~~~~~~~~~~~aIR~~ 321 (535)
+..+.+.+-++.+.+ ++ -..|..|.|.-||..+ .. +.+.....|+.+.+.+++.
T Consensus 227 ------------qT~e~~~~~l~~~~~-l~-~~~is~y~L~~~pgT~l~~~~~~g~l~~~~~~~~~~~my~~~~~~L~~~ 292 (449)
T PRK09058 227 ------------QTPEIWQQDLAIVRD-LG-LDGVDLYALNLLPGTPLAKAVEKGKLPPPATPAERADMYAYGVEFLAKA 292 (449)
T ss_pred ------------CCHHHHHHHHHHHHh-cC-CCEEEEeccccCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHC
Confidence 334555555555554 22 2367778888898752 11 3466678888888888887
Q ss_pred CCCcE
Q 046395 322 SSSAY 326 (535)
Q Consensus 322 ~p~~~ 326 (535)
+=.++
T Consensus 293 Gy~~y 297 (449)
T PRK09058 293 GWRQL 297 (449)
T ss_pred CCeEE
Confidence 76554
|
|
| >PF14200 RicinB_lectin_2: Ricin-type beta-trefoil lectin domain-like; PDB: 2X2S_C 2X2T_A 2VSE_B 2VSA_A 3EF2_A 2IHO_A 3HZB_H 1YBI_B 3PHZ_A 3NBE_A | Back alignment and domain information |
|---|
Probab=84.17 E-value=6.3 Score=33.15 Aligned_cols=69 Identities=12% Similarity=0.270 Sum_probs=50.3
Q ss_pred eeEEEEec--CCeEEEEe-eCCcEEEeecC---CCe-EEEeccCCCCCCceEEEecCCCCceeEEEecC-CceEEEecc
Q 046395 55 TFRLWRIN--ETFYNFRL-SNKQFIGLENQ---GNK-LVAVSATEKFPEPFQITRKNGEPHRVRFRASN-GYFLQAKSE 125 (535)
Q Consensus 55 ~f~~~~~~--~~~~~~~~-~~~~~v~~~~~---~~~-~~a~~~~~~~~e~f~~~~~~~~~~~v~I~~~n-G~flq~~~~ 125 (535)
.+++-.++ ++.|.|+. ..|+++.+.+. +++ |+.....-...+.|.|++..+++ .+|...+ |+.|.+.+.
T Consensus 4 ~W~~~~~~~~~g~Y~i~n~~sg~~L~v~~~~~~~g~~v~~~~~~~~~~Q~W~i~~~~~g~--y~I~n~~s~~~Ldv~~~ 80 (105)
T PF14200_consen 4 QWTFTPVGDSDGYYKIRNVNSGKYLDVAGGSTANGTNVQQWTCNGNDNQQWKIEPVGDGY--YRIRNKNSGKVLDVAGG 80 (105)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEGCTTCSTTEBEEEEESSSSGGGEEEEEESTTSE--EEEEETSTTEEEEEGGG
T ss_pred EEEEEEecCCCCEEEEEECCCCCEEEeCCCCcCCCcEEEEecCCCCcCcEEEEEEecCCe--EEEEECCCCcEEEECCC
Confidence 45666666 89999995 59999999863 233 65555555889999999987653 6677766 888887654
|
... |
| >PRK05628 coproporphyrinogen III oxidase; Validated | Back alignment and domain information |
|---|
Probab=83.79 E-value=12 Score=39.45 Aligned_cols=122 Identities=17% Similarity=0.074 Sum_probs=78.6
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~ 253 (535)
..++++.++.|+++|+|.|-++|-- +.+.. -+.. ...+.+.++++.+++.|+. |.+|+- +.||
T Consensus 104 ~~i~~e~l~~l~~~G~~rvslGvQS--~~~~~L~~l~R~---~s~~~~~~a~~~l~~~g~~~v~~dli~GlPg------- 171 (375)
T PRK05628 104 ESTSPEFFAALRAAGFTRVSLGMQS--AAPHVLAVLDRT---HTPGRAVAAAREARAAGFEHVNLDLIYGTPG------- 171 (375)
T ss_pred CCCCHHHHHHHHHcCCCEEEEeccc--CCHHHHHHcCCC---CCHHHHHHHHHHHHHcCCCcEEEEEeccCCC-------
Confidence 4578999999999999977776632 21110 0111 1567788899999999998 888875 4443
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcC
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----------DLKLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~ 322 (535)
+..+.+.+.++.+.+ ++- ..|..|.+.=||..+ ..+.+.....+..+.+.+++.+
T Consensus 172 ------------qt~~~~~~tl~~~~~-l~~-~~i~~y~l~~~~gT~l~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~G 237 (375)
T PRK05628 172 ------------ESDDDWRASLDAALE-AGV-DHVSAYALIVEDGTALARRVRRGELPAPDDDVLADRYELADARLSAAG 237 (375)
T ss_pred ------------CCHHHHHHHHHHHHh-cCC-CEEEeeeeecCCCChHHHHhhcCCCCCCChHHHHHHHHHHHHHHHHcC
Confidence 345666666666554 321 245556777677642 1223456677777778888776
Q ss_pred CCcE
Q 046395 323 SSAY 326 (535)
Q Consensus 323 p~~~ 326 (535)
=.++
T Consensus 238 ~~~y 241 (375)
T PRK05628 238 FDWY 241 (375)
T ss_pred CCee
Confidence 5544
|
|
| >PLN03244 alpha-amylase; Provisional | Back alignment and domain information |
|---|
Probab=83.66 E-value=16 Score=41.98 Aligned_cols=111 Identities=14% Similarity=0.207 Sum_probs=63.8
Q ss_pred hHHHHHHHHHHHHHcCCEEEEec---CCCCCCCCC----------CCCCCCCCCCCCCC--------hHHHHHHHHHHHH
Q 046395 219 SLQALDNAFRWAQKYGMKVIVDL---HALRVSQNG----------SPHSGSRDGFQEWS--------DSDIQETVAIIDF 277 (535)
Q Consensus 219 ~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ng----------~~~sg~~~~~~~W~--------~~~~~~~~~~~~~ 277 (535)
..+.|+++|+.|.++||.||||+ |..+....| +.+.+.......|. ++.++..+..++.
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~~~GL~~fDGt~~~Yf~~~~~g~~~~WGs~~fnyg~~EVr~FLLsna~y 518 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAAADEMVGLSLFDGSNDCYFHTGKRGHHKHWGTRMFKYGDLDVLHFLISNLNW 518 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCCCccccchhhcCCCccceeccCCCCccCCCCCceecCCCHHHHHHHHHHHHH
Confidence 57889999999999999999998 333321101 11111111123343 5667777777777
Q ss_pred HHHHhCCCC-------cEEEEE--e--ecCCC----CCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 278 LASRYADHP-------SLVAIE--L--MNEPK----APDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 278 la~ry~~~p-------~V~~~e--l--~NEP~----~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
..+.|+=+. +++..+ + ++.+. ....+ ..-..|++.+-..|++..|+.++|-.
T Consensus 519 WleEyhIDGFRfDaVtSMLY~d~G~~~f~g~~~~y~n~~~d-~dAv~fL~laN~~ih~~~P~~itIAE 585 (872)
T PLN03244 519 WITEYQIDGFQFHSLASMIYTHNGFASFNGDLDDYCNQYVD-KDALMYLILANEILHALHPKIITIAE 585 (872)
T ss_pred HHHHhCcCcceeecchhheeeccccccccCCccccccccCC-chHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 777664321 222111 1 01111 00112 24567888999999999998776664
|
|
| >PRK06582 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=83.59 E-value=9.5 Score=40.51 Aligned_cols=122 Identities=16% Similarity=0.084 Sum_probs=79.4
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEecC-CCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH-ALRVSQNGSPHS 254 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH-~~pg~~ng~~~s 254 (535)
..++++.++.|+++|+|.|-|.| ..+-+.. -+. ....+...++++.|++.+..|-+||- +.||
T Consensus 107 ~~~~~e~l~~l~~~GvnRiSiGv--QS~~d~~L~~lgR---~h~~~~~~~ai~~~~~~~~~v~~DlI~GlPg-------- 173 (390)
T PRK06582 107 TSFETEKFKAFKLAGINRVSIGV--QSLKEDDLKKLGR---THDCMQAIKTIEAANTIFPRVSFDLIYARSG-------- 173 (390)
T ss_pred CcCCHHHHHHHHHCCCCEEEEEC--CcCCHHHHHHcCC---CCCHHHHHHHHHHHHHhCCcEEEEeecCCCC--------
Confidence 45789999999999999655544 3322110 011 11456666778888888888999986 4443
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC-----------CCChHHHHHHHHHHHHHHHhcCC
Q 046395 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP-----------DLKLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 255 g~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~-----------~~~~~~~~~~~~~~~~aIR~~~p 323 (535)
+..+.+.+-++.+++ + +-+.|-.|.|.=||..+ ..+.+.....++.+.+.+++.+=
T Consensus 174 -----------qt~e~~~~~l~~~~~-l-~p~his~y~L~i~~gT~l~~~~~~g~~~~p~~~~~~~~~~~~~~~L~~~Gy 240 (390)
T PRK06582 174 -----------QTLKDWQEELKQAMQ-L-ATSHISLYQLTIEKGTPFYKLFKEGNLILPHSDAAAEMYEWTNHYLESKKY 240 (390)
T ss_pred -----------CCHHHHHHHHHHHHh-c-CCCEEEEecCEEccCChHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCC
Confidence 344556666666655 2 23478788888888642 12345667788888888888776
Q ss_pred CcE
Q 046395 324 SAY 326 (535)
Q Consensus 324 ~~~ 326 (535)
.++
T Consensus 241 ~~y 243 (390)
T PRK06582 241 FRY 243 (390)
T ss_pred cee
Confidence 555
|
|
| >PRK08446 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=83.35 E-value=10 Score=39.61 Aligned_cols=124 Identities=18% Similarity=0.117 Sum_probs=74.9
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc-cchHHHHHHHHHHHHHcCCE-EEEecC-CCCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV-GGSLQALDNAFRWAQKYGMK-VIVDLH-ALRVSQNGSPHSG 255 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~-~~~l~~ld~~i~~a~~~Gi~-VIldlH-~~pg~~ng~~~sg 255 (535)
..++++.++.|+++|+|.|-|.|- .+.+..- .... ....+.+.++++.+++.|+. |-+|+- +.||
T Consensus 94 ~~~~~e~l~~l~~~GvnRiSiGvQ--S~~~~~L-~~lgR~~~~~~~~~ai~~lr~~g~~~v~iDli~GlPg--------- 161 (350)
T PRK08446 94 NSATKAWLKGMKNLGVNRISFGVQ--SFNEDKL-KFLGRIHSQKQIIKAIENAKKAGFENISIDLIYDTPL--------- 161 (350)
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc--cCCHHHH-HHcCCCCCHHHHHHHHHHHHHcCCCEEEEEeecCCCC---------
Confidence 457799999999999996666553 2221100 0000 12567888899999999996 558885 4443
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC----hHHHHHHHHHHHHHHHhcCCCcE
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK----LDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~----~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
++.+.+.+.++.+.+ .+ -+.|..+.+.=||..+-.. ...-...+..+.+.+++.+=.++
T Consensus 162 ----------qt~~~~~~~l~~~~~-l~-~~~is~y~L~~~~gT~l~~~~~~~~~~~~~~~~~~~~l~~~Gy~~y 224 (350)
T PRK08446 162 ----------DNKKLLKEELKLAKE-LP-INHLSAYSLTIEENTPFFEKNHKKKDDENLAKFFIEQLEELGFKQY 224 (350)
T ss_pred ----------CCHHHHHHHHHHHHh-cC-CCEEEeccceecCCChhHHhhhcCCCHHHHHHHHHHHHHHCCCcEE
Confidence 345566666666554 22 2356667777788643100 00112466667777777765544
|
|
| >PRK08207 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=82.62 E-value=9.4 Score=41.79 Aligned_cols=123 Identities=15% Similarity=0.223 Sum_probs=75.2
Q ss_pred CccchHHHHHHHHHcCCCEEEeCCccccccCCC---CCCCCccchHHHHHHHHHHHHHcCC-EEEEecC-CCCCCCCCCC
Q 046395 178 KSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGM-KVIVDLH-ALRVSQNGSP 252 (535)
Q Consensus 178 ~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi-~VIldlH-~~pg~~ng~~ 252 (535)
+..++++.++.|+++|+|.|-| +...+.+.. -+. ....+.+.++++.|+++|+ .|-+|+- +.||
T Consensus 264 Pd~it~e~L~~Lk~~Gv~RISI--GvQS~~d~vLk~igR---~ht~e~v~~ai~~ar~~Gf~~In~DLI~GLPg------ 332 (488)
T PRK08207 264 PDTITEEKLEVLKKYGVDRISI--NPQTMNDETLKAIGR---HHTVEDIIEKFHLAREMGFDNINMDLIIGLPG------ 332 (488)
T ss_pred CCCCCHHHHHHHHhcCCCeEEE--cCCcCCHHHHHHhCC---CCCHHHHHHHHHHHHhCCCCeEEEEEEeCCCC------
Confidence 3467899999999999995444 433221100 011 1257888899999999999 6778875 4443
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC---------CCChHHHHHHHHHHHHHHHhcCC
Q 046395 253 HSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP---------DLKLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 253 ~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~---------~~~~~~~~~~~~~~~~aIR~~~p 323 (535)
+..+.+.+.++.+.+---+ .|-.+.|.=+|..+ ..+.+.....++.+.+..++.+-
T Consensus 333 -------------Et~ed~~~tl~~l~~L~pd--~isv~~L~i~~gT~l~~~~~~~~~~~~~~~~~m~~~a~~~l~~~Gy 397 (488)
T PRK08207 333 -------------EGLEEVKHTLEEIEKLNPE--SLTVHTLAIKRASRLTENKEKYKVADREEIEKMMEEAEEWAKELGY 397 (488)
T ss_pred -------------CCHHHHHHHHHHHHhcCcC--EEEEEeceEcCCChHHHhcCcCCCcCHHHHHHHHHHHHHHHHHcCC
Confidence 3456666666665542222 44445554444421 12345566777888888887765
Q ss_pred CcE
Q 046395 324 SAY 326 (535)
Q Consensus 324 ~~~ 326 (535)
.++
T Consensus 398 ~~Y 400 (488)
T PRK08207 398 VPY 400 (488)
T ss_pred Hhh
Confidence 554
|
|
| >COG3589 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=82.31 E-value=3 Score=42.66 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=40.7
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
.+-++.|.+.||.-|=..+. .| .+..+..+..++++++.|.++||+||+|.-
T Consensus 19 ~~Yi~~~~~~Gf~~IFtsl~-----~~---~~~~~~~~~~~~ell~~Anklg~~vivDvn 70 (360)
T COG3589 19 IAYIDRMHKYGFKRIFTSLL-----IP---EEDAELYFHRFKELLKEANKLGLRVIVDVN 70 (360)
T ss_pred HHHHHHHHHcCccceeeecc-----cC---CchHHHHHHHHHHHHHHHHhcCcEEEEEcC
Confidence 46677778899998766443 22 224556899999999999999999999996
|
|
| >COG3664 XynB Beta-xylosidase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.93 E-value=14 Score=38.84 Aligned_cols=224 Identities=13% Similarity=0.155 Sum_probs=109.7
Q ss_pred HHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE-EecCCCCCCCCCCCCCCCCCCCCCCC----
Q 046395 190 SQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI-VDLHALRVSQNGSPHSGSRDGFQEWS---- 264 (535)
Q Consensus 190 k~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI-ldlH~~pg~~ng~~~sg~~~~~~~W~---- 264 (535)
++.|+|-||--.-| .......- | .+.++|++++....+|+-.| ++||.-. -++ ..+ .|.
T Consensus 15 ~Ei~v~yi~~~~v~-h~~~q~~~--~---~~t~~d~i~d~~~~~~~~~ie~~l~~~~-l~~-~~~--------~wq~n~~ 78 (428)
T COG3664 15 DEIQVNYIRRHGVW-HVNAQKLF--Y---PFTYIDEIIDTLLDLGLDLIELFLIWNN-LNT-KEH--------QWQLNVD 78 (428)
T ss_pred hhhceeeehhccee-eeeecccc--C---ChHHHHHHHHHHHHhccHHHHHhhcccc-hhh-hhh--------hcccccC
Confidence 46777777653322 21111111 2 56889999999999995433 3334210 000 000 222
Q ss_pred --hHHHHHHHHHHHHHHHHhCCC-CcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCC-CChhhh
Q 046395 265 --DSDIQETVAIIDFLASRYADH-PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-GEWSEL 340 (535)
Q Consensus 265 --~~~~~~~~~~~~~la~ry~~~-p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g-~~~~~~ 340 (535)
....+....++..++.+|+-. -....+++.|||... .....+.+.|..++ |+..|. |-+++.|. .....+
T Consensus 79 ~~~~~~dl~~~fl~h~~~~vg~e~v~kw~f~~~~~pn~~-ad~~eyfk~y~~~a---~~~~p~--i~vg~~w~~e~l~~~ 152 (428)
T COG3664 79 DPKSVFDLIAAFLKHVIRRVGVEFVRKWPFYSPNEPNLL-ADKQEYFKLYDATA---RQRAPS--IQVGGSWNTERLHEF 152 (428)
T ss_pred CcHhHHHHHHHHHHHHHHHhChhheeecceeecCCCCcc-cchHHHHHHHHhhh---hccCcc--eeeccccCcHHHhhh
Confidence 247788899999999999843 256779999999974 33334444443333 344442 33444342 111222
Q ss_pred hcccCCCCcEEEEEeecCcCCCcccCCChhh--------hHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHH
Q 046395 341 LSFASNLSRVVIDVHFYNLFWDNFNKMSVQQ--------NIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKR 412 (535)
Q Consensus 341 ~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~--------~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~ 412 (535)
.. ..+.-..++.|.|.....+++.++.+. .++..+.- ...+... . -+.|.++.||....+.......
T Consensus 153 ~k--~~d~idfvt~~a~~~~av~~~~~~~~~~~l~~~~~~l~~~r~~-~d~i~~~-~-~~~pl~~~~wntlt~~~~~~n~ 227 (428)
T COG3664 153 LK--KADEIDFVTELANSVDAVDFSTPGAEEVKLSELKRTLEDLRGL-KDLIQHH-S-LGLPLLLTNWNTLTGPREPTNG 227 (428)
T ss_pred hh--ccCcccceeecccccccccccCCCchhhhhhhhhhhhhHHHHH-HHHHHhc-c-CCCcceeecccccCCCccccCc
Confidence 22 334455667788865433344333221 12222221 1112111 1 1346899999765443222222
Q ss_pred HHH--HHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 413 DYQ--RFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 413 ~~~--~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
.|. .++-.++.-.+..-.+..||++..-
T Consensus 228 sy~raa~i~~~Lr~~g~~v~a~~yW~~sdl 257 (428)
T COG3664 228 SYVRAAYIMRLLREAGSPVDAFGYWTNSDL 257 (428)
T ss_pred eeehHHHHHHHHHhcCChhhhhhhhhcccc
Confidence 222 2333222222222235557776543
|
|
| >PLN02784 alpha-amylase | Back alignment and domain information |
|---|
Probab=81.49 E-value=4.5 Score=46.71 Aligned_cols=58 Identities=22% Similarity=0.298 Sum_probs=41.7
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCC---C--c--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKP---F--V--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~---~--~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.|+++|+++|=||=..... .+....+ | + -+..+.|..+|+.|+++||+||+|+
T Consensus 524 ~ekldyL~~LG~taIWLpP~~~s~-s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 524 GEKAAELSSLGFTVVWLPPPTESV-SPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCC-CCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 677999999999999986533211 1100011 1 1 1467899999999999999999998
|
|
| >PRK09249 coproporphyrinogen III oxidase; Provisional | Back alignment and domain information |
|---|
Probab=81.23 E-value=10 Score=41.12 Aligned_cols=123 Identities=12% Similarity=0.065 Sum_probs=75.6
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc-cchHHHHHHHHHHHHHcCC-EEEEecC-CCCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV-GGSLQALDNAFRWAQKYGM-KVIVDLH-ALRVSQNGSPHSG 255 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~-~~~l~~ld~~i~~a~~~Gi-~VIldlH-~~pg~~ng~~~sg 255 (535)
..++++.++.|+++|+|.|-|+|-- + ++..-..+. ....+.+.++++.+++.|+ .|-+|+- +.||
T Consensus 147 ~~lt~e~l~~l~~aG~~risiGvqS--~-~~~~L~~l~r~~~~~~~~~ai~~l~~~G~~~v~~dli~GlPg--------- 214 (453)
T PRK09249 147 RELDLEMLDALRELGFNRLSLGVQD--F-DPEVQKAVNRIQPFEFTFALVEAARELGFTSINIDLIYGLPK--------- 214 (453)
T ss_pred CcCCHHHHHHHHHcCCCEEEECCCC--C-CHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEEEEEccCCC---------
Confidence 3578999999999999988887632 2 110000000 1256778889999999999 6878875 4443
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC----------CCChHHHHHHHHHHHHHHHhcCCCc
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP----------DLKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~----------~~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
++.+.+.+.++.+.+.-- ..|-.+.+...|... -.+.+.....+..+.+.+.+.+=.+
T Consensus 215 ----------qt~e~~~~~l~~~~~l~~--~~i~~y~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~Gy~~ 282 (453)
T PRK09249 215 ----------QTPESFARTLEKVLELRP--DRLAVFNYAHVPWLFKAQRKIDEADLPSPEEKLAILQQTIETLTEAGYQY 282 (453)
T ss_pred ----------CCHHHHHHHHHHHHhcCC--CEEEEccCccchhhhhHhcCCCcccCCCHHHHHHHHHHHHHHHHHCCCEE
Confidence 345566666666655222 245445555555421 1234566677777777777765444
|
|
| >COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=80.38 E-value=1.1 Score=40.73 Aligned_cols=20 Identities=25% Similarity=0.463 Sum_probs=17.7
Q ss_pred CCceEEEecCCccCCccccCC
Q 046395 508 SKREDGIKNLKEFGDDYYRPS 528 (535)
Q Consensus 508 ~~~~~~~k~v~~~~~~~f~~~ 528 (535)
++.++|+|||| .|||||+|-
T Consensus 32 g~~i~a~k~Vt-~nepfF~gH 51 (147)
T COG0764 32 GKRIVAIKNVT-INEPFFTGH 51 (147)
T ss_pred CcEEEEEEccC-CCCCeeCCc
Confidence 56788999999 999999973
|
|
| >PF04601 DUF569: Protein of unknown function (DUF569); InterPro: IPR007679 This is a family of hypothetical proteins | Back alignment and domain information |
|---|
Probab=80.30 E-value=9.1 Score=34.52 Aligned_cols=64 Identities=19% Similarity=0.410 Sum_probs=47.2
Q ss_pred cCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCCceEEEecCCCCceeEEEecCCceEEEecc
Q 046395 62 NETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKSE 125 (535)
Q Consensus 62 ~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e~f~~~~~~~~~~~v~I~~~nG~flq~~~~ 125 (535)
+...+.||+..++|+.|+..+.+|.=.+.-....-.|.+.+-.++...|++++.-|.||-+...
T Consensus 6 d~~~VRLRS~~~kYL~ADeDg~~Vs~~~~~~s~na~W~Ve~v~~~~~~v~L~saYGrYL~as~~ 69 (142)
T PF04601_consen 6 DGKHVRLRSHHGKYLHADEDGEGVSQDRRGASLNAAWTVERVPGSPNYVRLRSAYGRYLAASDE 69 (142)
T ss_pred CCCEEEEEecCCCEEEEcCCCCeEEECCCCCCCcceEEEEEecCCCCEEEEeeccCceEeccCC
Confidence 6778899999999999987334455555556667777654444445679999988999988644
|
Some family members contain two copies of the region. |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 535 | ||||
| 1eqp_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans Length | 2e-36 | ||
| 2pc8_A | 400 | E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida | 2e-36 | ||
| 3n9k_A | 399 | F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 3e-36 | ||
| 2pb1_A | 400 | Exo-b-(1,3)-glucanase From Candida Albicans In Comp | 4e-36 | ||
| 1cz1_A | 394 | Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 | 4e-36 | ||
| 2pbo_A | 400 | E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida A | 4e-36 | ||
| 3o6a_A | 399 | F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase | 9e-36 | ||
| 2pf0_A | 400 | F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida | 2e-35 | ||
| 1h4p_A | 408 | Crystal Structure Of Exo-1,3-Beta Glucanse From Sac | 3e-26 | ||
| 1cec_A | 343 | A Common Protein Fold And Similar Active Site In Tw | 2e-10 | ||
| 1cen_A | 343 | Cellulase (Celc) Mutant With Glu 140 Replaced By Gl | 5e-10 | ||
| 3mmu_A | 317 | Crystal Structure Of Endoglucanase Cel5a From The H | 8e-08 | ||
| 3azr_A | 317 | Diverse Substrates Recognition Mechanism Revealed B | 9e-08 | ||
| 3amg_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 4e-07 | ||
| 3aof_A | 317 | Crystal Structures Of Thermotoga Maritima Cel5a In | 5e-07 | ||
| 1vjz_A | 341 | Crystal Structure Of Endoglucanase (Tm1752) From Th | 4e-06 | ||
| 3rjy_A | 320 | Crystal Structure Of Hyperthermophilic Endo-Beta-1, | 4e-05 | ||
| 3nco_A | 320 | Crystal Structure Of Fncel5a From F. Nodosum Rt17-B | 7e-05 | ||
| 3rjx_A | 320 | Crystal Structure Of Hyperthermophilic Endo-Beta-1, | 8e-05 | ||
| 1ece_A | 358 | Acidothermus Cellulolyticus Endocellulase E1 Cataly | 5e-04 | ||
| 1vrx_A | 358 | Endocellulase E1 From Acidothermus Cellulolyticus M | 5e-04 |
| >pdb|1EQP|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans Length = 394 | Back alignment and structure |
|
| >pdb|2PC8|A Chain A, E292q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans In Complex With Two Separately Bound Glucopyranoside Units At 1.8 A Length = 400 | Back alignment and structure |
|
| >pdb|3N9K|A Chain A, F229aE292S DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans In Complex With Laminaritriose At 1.7 A Length = 399 | Back alignment and structure |
|
| >pdb|2PB1|A Chain A, Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Unhydrolysed And Covalently Linked 2,4-dinitrophenyl-2-deoxy-2- Fluoro-b-d-glucopyranoside At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|1CZ1|A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution Length = 394 | Back alignment and structure |
|
| >pdb|2PBO|A Chain A, E27q Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Length = 400 | Back alignment and structure |
|
| >pdb|3O6A|A Chain A, F144yF258Y DOUBLE MUTANT OF EXO-Beta-1,3-Glucanase From Candida Albicans At 2 A Length = 399 | Back alignment and structure |
|
| >pdb|2PF0|A Chain A, F258i Mutant Of Exo-B-(1,3)-Glucanase From Candida Albicans At 1.9 A Length = 400 | Back alignment and structure |
|
| >pdb|1H4P|A Chain A, Crystal Structure Of Exo-1,3-Beta Glucanse From Saccharomyces Cerevisiae Length = 408 | Back alignment and structure |
|
| >pdb|1CEC|A Chain A, A Common Protein Fold And Similar Active Site In Two Distinct Families Of Beta-Glycanases Length = 343 | Back alignment and structure |
|
| >pdb|1CEN|A Chain A, Cellulase (Celc) Mutant With Glu 140 Replaced By Gln Complexed With Cellohexaose Length = 343 | Back alignment and structure |
|
| >pdb|3MMU|A Chain A, Crystal Structure Of Endoglucanase Cel5a From The Hyperthermophilic Thermotoga Maritima Length = 317 | Back alignment and structure |
|
| >pdb|3AZR|A Chain A, Diverse Substrates Recognition Mechanism Revealed By Thermotoga Maritima Cel5a Structures In Complex With Cellobiose Length = 317 | Back alignment and structure |
|
| >pdb|3AMG|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Cellobiose Substrate, Mutant Form Length = 317 | Back alignment and structure |
|
| >pdb|3AOF|A Chain A, Crystal Structures Of Thermotoga Maritima Cel5a In Complex With Mannotriose Substrate Length = 317 | Back alignment and structure |
|
| >pdb|1VJZ|A Chain A, Crystal Structure Of Endoglucanase (Tm1752) From Thermotoga Maritima At 2.05 A Resolution Length = 341 | Back alignment and structure |
|
| >pdb|3RJY|A Chain A, Crystal Structure Of Hyperthermophilic Endo-Beta-1,4-Glucanase In Complex With Substrate Length = 320 | Back alignment and structure |
|
| >pdb|3NCO|A Chain A, Crystal Structure Of Fncel5a From F. Nodosum Rt17-B1 Length = 320 | Back alignment and structure |
|
| >pdb|3RJX|A Chain A, Crystal Structure Of Hyperthermophilic Endo-Beta-1,4-Glucanase Length = 320 | Back alignment and structure |
|
| >pdb|1ECE|A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose Length = 358 | Back alignment and structure |
|
| >pdb|1VRX|A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g Length = 358 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 535 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 8e-65 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 5e-63 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 1e-59 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 3e-55 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 3e-47 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 3e-43 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 6e-32 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 7e-32 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 9e-31 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 2e-30 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 1e-29 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 1e-28 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 2e-28 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 2e-28 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 7e-28 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 4e-25 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 2e-24 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 3e-24 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 8e-24 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 5e-23 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 5e-23 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 3e-22 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 5e-22 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 3e-21 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 2e-20 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 2e-19 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 4e-19 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 2e-17 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 2e-16 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 1e-15 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 1e-14 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 8e-06 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 8e-05 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 2e-11 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 3e-11 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 3e-11 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 4e-11 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 5e-10 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 1e-09 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 2e-07 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 5e-07 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 3e-06 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 2e-04 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A Length = 399 | Back alignment and structure |
|---|
Score = 215 bits (548), Expect = 8e-65
Identities = 97/343 (28%), Positives = 164/343 (47%), Gaps = 43/343 (12%)
Query: 143 PSVFNMT-----IVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAV 197
PS+F EY T G + A ++++ HW ++ITE+DFK +S GLN V
Sbjct: 31 PSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFV 90
Query: 198 RIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSR 257
RIP+G+W A+ P+V G +Q L+ A WA+K ++V +DLH SQNG +SG R
Sbjct: 91 RIPIGYW-AFQLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLR 149
Query: 258 DGFQEWSDSDIQETVAIIDFLASRYADHP---SLVAIELMNEPKAPDLKLDSLKTYYKAG 314
D + + + Q T+ +++ + +Y + ++ IEL+NEP P L +D LK ++ G
Sbjct: 150 DSYNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDG 209
Query: 315 YDTVRKYSSSAYVILSN--RLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQN 372
Y+++R+ S VI+ + ++ G W+ L+ A VV+D H Y +F ++ +
Sbjct: 210 YNSLRQTGSVTPVIIHDAAQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDH 269
Query: 373 IDYIYRQRSSDLRN-----VTTSDGPLSFVGEW---------------------SCEWEA 406
I + + L+ +W SC+
Sbjct: 270 ISVACNWGWDAKKESHWNVAGSWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLL 329
Query: 407 EGAS-----KRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+ + K D +R+ EAQLD + T GW +W++K +P+
Sbjct: 330 DISQWSDEHKTDTRRYIEAQLDAF-EYTGGWVFWSWKTENAPE 371
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 Length = 408 | Back alignment and structure |
|---|
Score = 210 bits (536), Expect = 5e-63
Identities = 85/352 (24%), Positives = 138/352 (39%), Gaps = 45/352 (12%)
Query: 135 PSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194
PS +E + EY G D A ++ HW ++ E+DF ++ G
Sbjct: 30 PSLFEAF--RTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGF 87
Query: 195 NAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS 254
N VRIP+G+W G LD A WA+ +KV VDLH SQNG +S
Sbjct: 88 NLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNS 147
Query: 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADHPS---LVAIELMNEPKAPDLKLDS-LKTY 310
G RD ++ DS++ T+ +++++ +Y+ ++ IEL+NEP P L +D Y
Sbjct: 148 GLRDSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDY 207
Query: 311 YKAGYDTVRKYSSSAYVILSNRLG---GEWSELLSFASNLSRVVIDVHFYNLFWDNFNKM 367
Y+ +R S VI+ + W + ++ V ID H Y +F + +
Sbjct: 208 LAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLER 267
Query: 368 SVQQNIDYIYRQRSSD---------------LRNVTTSDGPLSFVGEWSCEWEAEGAS-- 410
S+ ++I + L + + F + W +
Sbjct: 268 SIDEHIKVACEWGTGVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSS 327
Query: 411 ------------------KRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
K + +R+ EAQLD + GW W YK S +
Sbjct: 328 YIGSCANNDDIAYWSDERKENTRRYVEAQLDAF-EMRGGWIIWCYKTESSLE 378
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Length = 343 | Back alignment and structure |
|---|
Score = 199 bits (508), Expect = 1e-59
Identities = 54/313 (17%), Positives = 109/313 (34%), Gaps = 52/313 (16%)
Query: 167 DKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNA 226
+ ++H+ ++ITE+D + +++ G + VR+P + I + L +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 227 FRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQE-TVAIIDFLASRYADH 285
W +KY + +++D+H + + + + D + Q+ V I FLA RY +
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTSTL-----FEDPNQQKRFVDIWRFLAKRYINE 129
Query: 286 PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFAS 345
+A EL+N+ PD +R+ S+ ++ + EL + A
Sbjct: 130 REHIAFELLNQVVEPD--STRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLAD 187
Query: 346 -NLSRVVIDVHFYNLF---------------------------------------WDNFN 365
+ +V + HFYN F
Sbjct: 188 IDDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMME 247
Query: 366 KMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVY 425
+++ N + + + + L + GE+ A ++ E + +
Sbjct: 248 LNNLKLNKELLRKDLKPAIEFREKKKCKL-YCGEFGV---IAIADLESRIKWHEDYISLL 303
Query: 426 GRATFGWAYWAYK 438
G A W YK
Sbjct: 304 EEYDIGGAVWNYK 316
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 Length = 341 | Back alignment and structure |
|---|
Score = 188 bits (479), Expect = 3e-55
Identities = 53/287 (18%), Positives = 94/287 (32%), Gaps = 33/287 (11%)
Query: 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYG 234
EEDF +M+Q N VRIP+ + D P + +D W +KYG
Sbjct: 31 IKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYG 90
Query: 235 MKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQE-TVAIIDFLASRYADHPS-LVAIE 292
+ + + LH + W D QE + F+A RY S ++
Sbjct: 91 IHICISLHRAPGYSVNKEVE---EKTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFN 147
Query: 293 LMNEPKAPD---LKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSR 349
L+NEP PD + ++ + K +RK +I+ G + + +
Sbjct: 148 LINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIID---GLGYGNIPVDDLTIEN 204
Query: 350 VVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDG----------------- 392
V Y F K + D+ + + +
Sbjct: 205 TVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQKG 264
Query: 393 -PLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYK 438
+ F GE + ++ E L+++ G+A W ++
Sbjct: 265 IEV-FCGEMGAYNKTPHD---VVLKWLEDLLEIFKTLNIGFALWNFR 307
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Length = 317 | Back alignment and structure |
|---|
Score = 166 bits (421), Expect = 3e-47
Identities = 48/278 (17%), Positives = 98/278 (35%), Gaps = 32/278 (11%)
Query: 176 HWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGM 235
W I +E F + + G + VRIP+ W PP + + +D A K G+
Sbjct: 29 DWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGL 88
Query: 236 KVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMN 295
V++++H N R +A+ +A RY D+P + E++N
Sbjct: 89 AVVINIHHYEELMNDPEEHKER-------------FLALWKQIADRYKDYPETLFFEILN 135
Query: 296 EPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL-SNRLGGEWS-ELLSFASNLSRVVID 353
P +L + + +R +I+ + GG + E LS ++
Sbjct: 136 APHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAEWGGISALEKLSVPKWEKNSIVT 194
Query: 354 VHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLS-------------FVGEW 400
+H+YN F + + ++ + + ++GE+
Sbjct: 195 IHYYNPFEFTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNFIEEWSKKNKRPIYIGEF 254
Query: 401 SCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYK 438
+A+ S+ ++ + + + AYW +
Sbjct: 255 GAYRKADLESR---IKWTSFVVREMEKRRWSLAYWEFC 289
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* Length = 320 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 3e-43
Identities = 61/317 (19%), Positives = 101/317 (31%), Gaps = 42/317 (13%)
Query: 142 DPSVFNMTIVSTMHGEYQITNGY---GPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVR 198
D SV N+ S I +G +A W YI +E FK + + G ++VR
Sbjct: 2 DQSVSNVDKSSAFEYNKMIGHGINMGNALEAPV--EGSWGVYIEDEYFKIIKERGFDSVR 59
Query: 199 IPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD 258
IP+ W K P L + + A K + VI++ H +
Sbjct: 60 IPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHF-------------E 106
Query: 259 GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTV 318
+ D V I +A + D+P + E+ NEP A +L Y +
Sbjct: 107 ELYQAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEP-AQNLTPTKWNELYPKVLGEI 165
Query: 319 RKYSSSAYVILSNRLGGEWSELLSFAS----NLSRVVIDVHFYNLFWDNFNKMSVQQNID 374
RK + S VI+ WS + +++ H+Y F
Sbjct: 166 RKTNPSRIVIID---VPNWSNYSYVRELKLVDDKNIIVSFHYYEPFNFTHQGAEWVSPTL 222
Query: 375 YIYRQRSSDLRNVTTSDGPLS-------------FVGEWSCEWEAEGASKRDYQRFAEAQ 421
I + V F+GE+ +A+ ++ +
Sbjct: 223 PIGVKWEGKDWEVEQIRNHFKYVSEWAKKNNVPIFLGEFGAYSKADME---SRVKWTKTV 279
Query: 422 LDVYGRATFGWAYWAYK 438
+ F AYW +
Sbjct: 280 RRIAEEFGFSLAYWEFC 296
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* Length = 376 | Back alignment and structure |
|---|
Score = 125 bits (316), Expect = 6e-32
Identities = 51/281 (18%), Positives = 86/281 (30%), Gaps = 38/281 (13%)
Query: 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV 239
TE+ FK + N N RIP W + P L+ + + K G VI+
Sbjct: 62 KTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVIL 121
Query: 240 DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299
+LH H F E D+ + I +A + D+ + E +NEP+
Sbjct: 122 NLH----------HETWNHAFSETLDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNEPRK 171
Query: 300 PD----------LKLDSLKTYYKAGYDTVRKY----SSSAYVILSNRLGGEWSELLSFA- 344
D D++ TVR +I + +F
Sbjct: 172 NDTPVEWTGGDQEGWDAVNAMNAVFLKTVRSAGGNNPKRHLMIPPYAAACNENSFNNFIF 231
Query: 345 -SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVT-------TSDGPLSF 396
+ +V+ VH Y + NF + + +D DL G
Sbjct: 232 PEDDDKVIASVHAYAPY--NFALNNGEGAVDKFDAAGKRDLEWNINLMKKRFVDQGIPMI 289
Query: 397 VGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAY 437
+GE+ + + F ++ G +W
Sbjct: 290 LGEYGAMNRDNEEDRATWAEFYMEKVTAMG---VPQIWWDN 327
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A Length = 358 | Back alignment and structure |
|---|
Score = 125 bits (314), Expect = 7e-32
Identities = 53/310 (17%), Positives = 102/310 (32%), Gaps = 45/310 (14%)
Query: 161 TNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVG--- 217
N +G + ++ W + G N +R+P I P
Sbjct: 26 INWFGFETCNYVVHGLWSRDY-RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQM 84
Query: 218 -------GSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQE 270
SLQ +D +A + G+++I+D H P + S
Sbjct: 85 NQDLQGLTSLQVMDKIVAYAGQIGLRIILDRH--------RPDCSGQSALWYTSSVSEAT 136
Query: 271 TVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDS-----LKTYYKAGYDTVRKYSSSA 325
++ + LA RY +P++V +L NEP P + + + V + +
Sbjct: 137 WISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNL 196
Query: 326 YVIL-----SNRLGGEWSELLSFASNLS-------RVVIDVHFYNLFWDN---FNKMSVQ 370
+ + N W L A R+V H Y F+ +
Sbjct: 197 LIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFP 256
Query: 371 QNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAE--AQLDVYGRA 428
N+ I+ + L N + P+ ++GE+ ++ + + + YG
Sbjct: 257 NNMPGIWNKNWGYLFNQNIA--PV-WLGEFGTTLQSTT-DQTWLKTLVQYLRPTAQYGAD 312
Query: 429 TFGWAYWAYK 438
+F W +W++
Sbjct: 313 SFQWTFWSWN 322
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A Length = 305 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 9e-31
Identities = 45/285 (15%), Positives = 90/285 (31%), Gaps = 48/285 (16%)
Query: 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV 239
+ + G+N R+P L L + G +V
Sbjct: 31 WPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVV 90
Query: 240 DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDF---LASRYADHPSLVAIELMNE 296
D H + + +S I F +AS++A +P LV + NE
Sbjct: 91 DPHN----------------YGRYYNSIISSPSDFETFWKTVASQFASNP-LVIFDTDNE 133
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASN---------- 346
D L + +A D +R +++ I G W+ ++ +
Sbjct: 134 YHDMDQTL--VLNLNQAAIDGIRSAGATSQYIFVE--GNSWTGAWTWTNVNDNMKSLTDP 189
Query: 347 LSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA 406
+++ ++H Y + + S I ++R + ++G +GE++ +
Sbjct: 190 SDKIIYEMHQY--LDSDGSGTSATCVSSTIGQERITSATQWLRANGKKGIIGEFAGGADN 247
Query: 407 EGASK-RDYQRFAEAQLDVYGRATFGWAYWA-------YKFAESP 443
+ + DV+ G +WA Y F+ P
Sbjct: 248 VCETAITGMLDYMAQNTDVW----TGAIWWAAGPWWGDYIFSMEP 288
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Length = 395 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 1e-29
Identities = 51/300 (17%), Positives = 95/300 (31%), Gaps = 45/300 (15%)
Query: 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV 239
+T E K + G ++RIPV + P L + +A G+ VI+
Sbjct: 69 TVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVII 128
Query: 240 DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299
++H S G + ++ + +A++++++ + E MNE
Sbjct: 129 NIH---GDGYNSVQGGWLLVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFD 185
Query: 300 PD------LKLDSLKTYYKAGYDTVRK-----------------YSSSAYVILSNRLGGE 336
+ +L Y + DTVR+ L +
Sbjct: 186 GNYGNPNSAYYTNLNAYNQIFVDTVRQTGGNNNARWLLVPGWNTNIDYTVGNYGFTLPTD 245
Query: 337 WSELLSFASNLSRVVIDVHFYNLF----------------WDNFNKMSVQQNIDYIYRQR 380
+ S+ R++I H+Y+ + N K S DY+ Q
Sbjct: 246 NYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPAKKSTWGQEDYLESQF 305
Query: 381 SSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQR--FAEAQLDVYGRATFGWAYWAYK 438
S T P+ +GE+ + S + R +A+A + YW
Sbjct: 306 KSMYDKFVTQGYPV-VIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVYWDNG 364
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* Length = 306 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-28
Identities = 48/287 (16%), Positives = 94/287 (32%), Gaps = 42/287 (14%)
Query: 175 DHWKSYITEEDFKFMSQN-GLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKY 233
+ +T+ ++ + + +R+ + P+ G + A
Sbjct: 37 QWFDHCLTDSSLDALAYDWKADIIRLSMYIQEDGYETNPR----GFTDRMHQLIDMATAR 92
Query: 234 GMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIEL 293
G+ VIVD H L ++ +A R+A + V E+
Sbjct: 93 GLYVIVDWHILTPGD---------------PHYNLDRAKTFFAEIAQRHASKTN-VLYEI 136
Query: 294 MNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFA-SNLSRVVI 352
NEP S+K+Y + +R+ + +I+ WS L S + +
Sbjct: 137 ANEPNGVS--WASIKSYAEEVIPVIRQRDPDSVIIVG---TRGWSSLGVSEGSGPAEIAA 191
Query: 353 D-VHFYNLFWD-NFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW-SCEWEAEGA 409
+ V+ N+ + +F S + N R+ S P+ FV E+ + + +GA
Sbjct: 192 NPVNASNIMYAFHFYAASHRDNYLNALREASELF--------PV-FVTEFGTETYTGDGA 242
Query: 410 SKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSS 456
+ A+ +D+ GW W Y +
Sbjct: 243 NDFQM---ADRYIDLMAERKIGWTKWNYSDDFRSGAVFQPGTCASGG 286
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} Length = 340 | Back alignment and structure |
|---|
Score = 115 bits (288), Expect = 2e-28
Identities = 57/320 (17%), Positives = 104/320 (32%), Gaps = 50/320 (15%)
Query: 152 STMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKP 211
T G + Y P K + + F++++G+ R+PVGW +
Sbjct: 17 CTTDGTCVTSKVYPPLKNFT--GSNNYPDGIGQMQHFVNEDGMTIFRLPVGWQYLVNNNL 74
Query: 212 PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQET 271
S+ D + G IVD+H ++ G +
Sbjct: 75 GGNLDSTSISKYDQLVQGCLSLGAYCIVDIHN---------YARWNGGIIGQGGPTNAQF 125
Query: 272 VAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331
++ LAS+YA V +MNEP ++ + +R +++ I
Sbjct: 126 TSLWSQLASKYASQSR-VWFGIMNEPHDVNINT--WAATVQEVVTAIRNAGATSQFISLP 182
Query: 332 RLGGEWSELLSFASN---------------LSRVVIDVHFYNLFWDN--FNKMSVQQNID 374
G +W +F S+ + ++ DVH Y L DN + NID
Sbjct: 183 --GNDWQSAGAFISDGSAAALSQVTNPDGSTTNLIFDVHKY-LDSDNSGTHAECTTNNID 239
Query: 375 YIYRQRSSDLRNVTTSDGPLSFVGEW-SCEWEAEGASKRDYQRFAEAQLDVYGRATFGWA 433
+ ++ LR + + + E ++ ++ DVY G+
Sbjct: 240 GAFSPLATWLRQ----NNRQAILTETGGGNVQSCIQDMCQQIQYLNQNSDVY----LGYV 291
Query: 434 YWA-------YKFAESPQKA 446
W Y E+P +
Sbjct: 292 GWGAGSFDSTYVLTETPTSS 311
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Length = 345 | Back alignment and structure |
|---|
Score = 114 bits (287), Expect = 2e-28
Identities = 40/286 (13%), Positives = 95/286 (33%), Gaps = 40/286 (13%)
Query: 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYG 234
+ T + + G N +R+PV W P ++ ++ +A
Sbjct: 37 NWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDND 96
Query: 235 MKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQE-TVAIIDFLASRYADHPSLVAIEL 293
M VI++LH H +++ ++ + +A+ + + + E
Sbjct: 97 MYVIINLH----------HENEWLKPFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFET 146
Query: 294 MNEPKAPD----------LKLDSLKTYYKAGYDTVRK---YSSSAYVILSNRLGGEWSEL 340
MNEP+ + + Y + +R +++ Y+++ S +
Sbjct: 147 MNEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATGGNNATRYIMVP---TLAASAM 203
Query: 341 LSFASNL------SRVVIDVHFYNLFWDNFNKMSVQQ-NIDYIYRQRSSDLRNVTT---S 390
+ ++L S+V++ +H Y+ ++ + DY S+ V
Sbjct: 204 STTINDLVIPNNDSKVIVSLHMYSPYFFAMDINGTSSWGSDYDKSSLDSEFDAVYNKFVK 263
Query: 391 DGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWA 436
+G +GE + A++ + + G +W
Sbjct: 264 NGRAVVIGEMGSINKNNTAARVTHAEYYAKSAKARG---LTPIWWD 306
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A Length = 327 | Back alignment and structure |
|---|
Score = 113 bits (283), Expect = 7e-28
Identities = 51/287 (17%), Positives = 99/287 (34%), Gaps = 49/287 (17%)
Query: 176 HWKSYITEEDFKFM-SQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYG 234
+ Y+ ++ K++ G+ R + P + A A++ G
Sbjct: 64 WYGEYVNKDSLKWLRDDWGITVFRAAMYTADGGYIDNP-----SVKNKVKEAVEAAKELG 118
Query: 235 MKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELM 294
+ VI+D H L +G+P + + ++ ++S Y + P+ V E+
Sbjct: 119 IYVIIDWHIL---NDGNP------------NQNKEKAKEFFKEMSSLYGNTPN-VIYEIA 162
Query: 295 NEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNL----SRV 350
NEP +K Y + +RK +I+ G WS+ ++ A++ + V
Sbjct: 163 NEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVG---TGTWSQDVNDAADDQLKDANV 219
Query: 351 VIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW-SCEWEAEGA 409
+ +HFY + ++ +Y + P+ FV EW + + G
Sbjct: 220 MYALHFYA----GTHGQFLRDKANYALSK------GA-----PI-FVTEWGTSDASGNGG 263
Query: 410 SKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSS 456
D + L T W W + AL +S
Sbjct: 264 VFLDQ---SREWLKYLDSKTISWVNWNLSDKQESSSALKPGASKTGG 307
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* Length = 302 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-25
Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 51/279 (18%)
Query: 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH 242
+ F + +G N VR+ + + + P + N ++ + ++++H
Sbjct: 35 TQAFADIKSHGANTVRVVLSNGVRWSKNGP--------SDVANVISLCKQNRLICMLEVH 86
Query: 243 ALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD- 301
S S W + L S V I + NEP D
Sbjct: 87 DTTGYGEQSGASTLDQAVDYWIE------------LKSVLQGEEDYVLINIGNEPYGNDS 134
Query: 302 LKLDSLKTYYKAGYDTVRKYSSSAYVIL-SNRLGGEWSELLSFASN-------LSRVVID 353
+ + T A +R +++ + G +W+ + ++ V
Sbjct: 135 ATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTVFS 194
Query: 354 VHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRD 413
+H Y ++ +++ + PL +GE+ G D
Sbjct: 195 IHMY---GVYSQASTITSYLEHFVNA------GL-----PL-IIGEF-------GHDHSD 232
Query: 414 YQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSS 452
+ + R G+ W++ + L + +
Sbjct: 233 GNPDEDTIMAEAERLKLGYIGWSWSGNGGGVEYLDMVYN 271
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A Length = 303 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 2e-24
Identities = 48/284 (16%), Positives = 92/284 (32%), Gaps = 44/284 (15%)
Query: 177 WKSYITEEDFKFM-SQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGM 235
+ ++ E K++ G+N R + + P + + A A +
Sbjct: 40 YGQFVNYESMKWLRDDWGINVFRAAMYT--SSGGYIDDP---SVKEKVKEAVEAAIDLDI 94
Query: 236 KVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMN 295
VI+D H L + + +E D ++ Y D+P+ V E+ N
Sbjct: 95 YVIIDWHILSDNDP---------------NIYKEEAKDFFDEMSELYGDYPN-VIYEIAN 138
Query: 296 EPKAPDLKL-DSLKTYYKAGYDTVRKYSSSAYVILSNRL-GGEWSELLSFASNLSRVVID 353
EP D+ + +K Y + +R + +I+ + V+
Sbjct: 139 EPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYA 198
Query: 354 VHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW-SCEWEAEGASKR 412
HFY + +++ +DY Q + FV EW + +G
Sbjct: 199 FHFY----AGTHGQNLRDQVDYALDQ------GA-----AI-FVSEWGTSAATGDGGVFL 242
Query: 413 DYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSS 456
D A+ +D WA W+ + AL ++
Sbjct: 243 DE---AQVWIDFMDERNLSWANWSLTHKDESSAALMPGANPTGG 283
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* Length = 293 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-24
Identities = 43/265 (16%), Positives = 81/265 (30%), Gaps = 49/265 (18%)
Query: 180 YITEEDFKFM-SQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
+ T E ++ +R +G G++ LD A M VI
Sbjct: 38 FYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVI 96
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298
+D H+ + +D V + +A++Y + + V E+ NEP
Sbjct: 97 IDFHSHE------------------AHTDQATAVRFFEDVATKYGQYDN-VIYEIYNEPL 137
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNL----SRVVIDV 354
+ +K Y + D +R +++ WS+ + AS + + +
Sbjct: 138 QISWV-NDIKPYAETVIDKIRAIDPDNLIVVG---TPTWSQDVDVASQNPIDRANIAYTL 193
Query: 355 HFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW-SCEWEAEGASKRD 413
HFY + S + L F EW + + G +
Sbjct: 194 HFY----AGTHGQSYRNKAQTALDNGI-----------AL-FATEWGTVNADGNGGVNIN 237
Query: 414 YQRFAEAQLDVYGRATFGWAYWAYK 438
+A + + A WA
Sbjct: 238 E---TDAWMAFFKTNNISHANWALN 259
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 Length = 291 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 8e-24
Identities = 44/285 (15%), Positives = 87/285 (30%), Gaps = 49/285 (17%)
Query: 176 HWKSYITEEDFKFMSQN-GLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYG 234
+ + T + + ++ + VR +G + G+ ++ A
Sbjct: 34 GGEKFYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPA---GNKAKVERVVDAAIAND 90
Query: 235 MKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELM 294
M I+ H+ ++++ E + +A +Y + P+ V E+
Sbjct: 91 MYAIIGWHSHS------------------AENNRSEAIRFFQEMARKYGNKPN-VIYEIY 131
Query: 295 NEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNL----SRV 350
NEP +++K Y +A +R +I+ WS+ + AS +
Sbjct: 132 NEPLQVSWS-NTIKPYAEAVISAIRAIDPDNLIIVG---TPSWSQNVDEASRDPINAKNI 187
Query: 351 VIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGAS 410
+HFY + S++ L FV EW A+G
Sbjct: 188 AYTLHFY----AGTHGESLRNKARQALNNGI-----------AL-FVTEW-GTVNADGNG 230
Query: 411 KRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLS 455
+ +A + A WA S L+
Sbjct: 231 GVNQTE-TDAWVTFMRDNNISNANWALNDKNEGASTYYPDSKNLT 274
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Length = 380 | Back alignment and structure |
|---|
Score = 100 bits (249), Expect = 5e-23
Identities = 45/296 (15%), Positives = 94/296 (31%), Gaps = 52/296 (17%)
Query: 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV 239
T++ + Q G N VRIPV W + + + + M VI+
Sbjct: 61 KTTKQMIDAIKQKGFNTVRIPVSWH-PHVSGSDYKISDVWMNRVQEVVNYCIDNKMYVIL 119
Query: 240 DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299
+ H G S S + ++ +A+R+A++ + E MNEP+
Sbjct: 120 NTHHDVDKVKGYFPSSQYM------ASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRL 173
Query: 300 PD---------------LKLDSLKTYYKAGYDTVRK---YSSSAYVILSNRLGGEWSELL 341
++ + + +TVR ++S Y++ G S
Sbjct: 174 VGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCP---GYVASPDG 230
Query: 342 SFASNL----------SRVVIDVHFYNLF----------WDNFNKMSVQQNIDYIYRQRS 381
+ +++++ VH Y + N ++ ++ +
Sbjct: 231 ATNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMD 290
Query: 382 SDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAY 437
+ T+ P+ +GE + ++ +Y + AQ G W
Sbjct: 291 NIYNKYTSRGIPV-IIGECGAVDKNNLKTRVEYMSYYVAQAKARG---ILCILWDN 342
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} Length = 345 | Back alignment and structure |
|---|
Score = 99.6 bits (248), Expect = 5e-23
Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 52/282 (18%)
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W +++ G N +RI + ++ + + A++ M
Sbjct: 51 WYKDTASTAIPAIAEQGANTIRIVLSDGGQWEKDD--------IDTVREVIELAEQNKMV 102
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
+V++H +G S SD+ V + V I + NE
Sbjct: 103 AVVEVHD---------ATGR------DSRSDLDRAVDYWIEMKDALIGKEDTVIINIANE 147
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASN-------LSR 349
+ Y +R + +++ G++ + + L
Sbjct: 148 WY-GSWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 206
Query: 350 VVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGA 409
+ +H Y + + +V+ NID + Q ++ L +GE+ G
Sbjct: 207 TIFSIHMYE--YAGGDANTVRSNIDRVIDQ------DL-----AL-VIGEF-------GH 245
Query: 410 SKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSS 451
D + L GW W++K + L LS
Sbjct: 246 RHTDGDVDEDTILSYSEETGTGWLAWSWKGNSAEWDYLDLSE 287
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A Length = 294 | Back alignment and structure |
|---|
Score = 96.4 bits (240), Expect = 3e-22
Identities = 41/282 (14%), Positives = 83/282 (29%), Gaps = 54/282 (19%)
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W +++ G N +RI + ++ + + A++ M
Sbjct: 28 WYKDTASTAIPAIAEQGANTIRIVLSDGGQWEKDD--------IDTIREVIELAEQNKMV 79
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
+V++H G S SD+ V + V I + NE
Sbjct: 80 AVVEVHDA----TGR-----------DSRSDLNRAVDYWIEMKDALIGKEDTVIINIANE 124
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASN-------LSR 349
+ Y +R + +++ G++ + + L
Sbjct: 125 W-YGSWDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSIHDYGQDVFNADPLKN 183
Query: 350 VVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGA 409
+ +H Y + + +V+ NID + Q ++ L +GE+ G
Sbjct: 184 TMFSIHMYE--YAGGDANTVRSNIDRVIDQ------DL-----AL-VIGEF-------GH 222
Query: 410 SKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSS 451
+ L GW W++K + L LS
Sbjct: 223 R--HTDVDEDTILSYSEETGTGWLAWSWKGNSTSWDYLDLSE 262
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Length = 481 | Back alignment and structure |
|---|
Score = 98.1 bits (243), Expect = 5e-22
Identities = 54/328 (16%), Positives = 103/328 (31%), Gaps = 66/328 (20%)
Query: 169 AAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFR 228
+AK D + + + + G N VR + W + +P P + L +++
Sbjct: 55 SAKSAPDGMPQFTEADLAREYADMGTNFVRFLI-SWRSVEPAPGV-YDQQYLDRVEDRVG 112
Query: 229 WAQKYGMKVIVDLHALRVSQNGSPHSGSR-------DGFQEW------------------ 263
W + G KV++D+H S +P S +G W
Sbjct: 113 WYAERGYKVMLDMHQDVYSGAITPEGNSGNGAGAIGNGAPAWATYMDGLPVEPQPRWELY 172
Query: 264 -------------------SDSDIQETVAIIDFLASRYADHPSLVAIELMNEP-----KA 299
++ +A R+AD+ ++VA +LMNEP +
Sbjct: 173 YIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAYDLMNEPFGGSLQG 232
Query: 300 PDLKLDSLKTYYKAGYDTVRKYSSSAYVIL-------SNRLGGEWSELLSFASNLSRVVI 352
P + L Y+ D +R+ +V + + L +++ + R+
Sbjct: 233 PAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSGLTKIDDPRAGQQRIAY 292
Query: 353 DVHFYNL---FWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGA 409
H Y L D ++ I R++ +G + + GA
Sbjct: 293 CPHLYPLPLDIGDGHEGLARTLTDVTIDAWRANTAHTARVLGDVPIILGSFGLDTTLPGA 352
Query: 410 SKRDYQRFAEAQLDVYGRATFGWAYWAY 437
+ E G +YW+
Sbjct: 353 R-----DYIERVYGTAREMGAGVSYWSS 375
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* Length = 458 | Back alignment and structure |
|---|
Score = 95.7 bits (237), Expect = 3e-21
Identities = 38/304 (12%), Positives = 86/304 (28%), Gaps = 58/304 (19%)
Query: 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPK-------PFVGG--SLQALDNAFRWAQK 232
E+ + G NA+R+P P P + G SLQ ++ + A
Sbjct: 86 WEDMLLQIKSLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGD 145
Query: 233 YGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIE 292
G+ V++D H + D ++ + +A R+ + +++ +
Sbjct: 146 LGIFVLLDYH--------RIGCTHIEPLWYTEDFSEEDFINTWIEVAKRFGKYWNVIGAD 197
Query: 293 LMNEPKAPDLKLDS-----------------LKTYYKAGYDTVRKYSSSAYVIL------ 329
L NEP + + + + K + + +
Sbjct: 198 LKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVAPHWLIFVEGTQFT 257
Query: 330 --SNRLGGEWSELLSFASNL------------SRVVIDVHFYN-LFWDNFNKMSVQQNID 374
+W + NL +++V H + ++ + D
Sbjct: 258 NPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFPD 317
Query: 375 YIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA-EGASKRDYQRFAEAQLDVYGRATFGWA 433
+ V G +GE+ ++ +Q + +
Sbjct: 318 NLPDIWYHHFGYVKLELGYSVVIGEFGGKYGHGGDPRDVIWQNKLVDWMIENKFC--DFF 375
Query: 434 YWAY 437
YW++
Sbjct: 376 YWSW 379
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 Length = 464 | Back alignment and structure |
|---|
Score = 93.2 bits (231), Expect = 2e-20
Identities = 43/332 (12%), Positives = 93/332 (28%), Gaps = 60/332 (18%)
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W + ++ G N VRI + + +Q + N A+ +
Sbjct: 36 WYKDQATTAIEGIANTGANTVRIVLSDGGQWTK--------DDIQTVRNLISLAEDNNLV 87
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
++++H + + + + D + E + S V I + NE
Sbjct: 88 AVLEVHDATGYDSIASLNRAVDYWIE---------------MRSALIGKEDTVIINIANE 132
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASN---------- 346
+ YK +R + +++ W + +
Sbjct: 133 WFG-SWDGAAWADGYKQAIPRLRNAGLNNTLMID---AAGWGQFPQSIHDYGREVFNADP 188
Query: 347 LSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA 406
+ +H Y + N V+ NID + Q ++ L +GE+
Sbjct: 189 QRNTMFSIHMYE--YAGGNASQVRTNIDRVLNQ------DL-----AL-VIGEF------ 228
Query: 407 EGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSS--LHWQTQVT 464
G + + + GW W++K + L LS+ + W +
Sbjct: 229 -GHRHTNGDVDESTIMSYSEQRGVGWLAWSWKGNGPEWEYLDLSNDWAGNNLTAWGNTIV 287
Query: 465 HIFSSLNEPNDTDKITPIETRFPAYPTVMHVN 496
+ L E + + +
Sbjct: 288 NGPYGLRETSKLSTVFTGGGSDGRTSPTTLYD 319
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* Length = 364 | Back alignment and structure |
|---|
Score = 88.9 bits (220), Expect = 2e-19
Identities = 43/279 (15%), Positives = 88/279 (31%), Gaps = 43/279 (15%)
Query: 177 WKSYITEEDFKFMSQN-GLNAVRIPVGW---WIAYDPKPPKPFVGGSLQALDNAFRWAQK 232
+ + E F +S + G N +R+ + A +P+ + A +
Sbjct: 50 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPE--------VKDLVYEGIELAFE 101
Query: 233 YGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSL--VA 290
+ M VIVD H + + +A Y DHP +
Sbjct: 102 HDMYVIVDWH--------------VHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYII 147
Query: 291 IELMNEPKAPD----------LKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL 340
EL NEP + +++K Y + + +R+ + ++ +
Sbjct: 148 WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLS 207
Query: 341 LSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW 400
+ ++ VHFY + + +++R + + F EW
Sbjct: 208 ADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAV-FATEW 266
Query: 401 -SCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYK 438
+ + +G D A+ L+ + WA W+
Sbjct: 267 GTSQANGDGGPYFDE---ADVWLNFLNKHNISWANWSLT 302
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 Length = 353 | Back alignment and structure |
|---|
Score = 87.8 bits (217), Expect = 4e-19
Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 15/196 (7%)
Query: 162 NGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPK-----PPKPFV 216
Y D ++ E M +G N+VR+ + P+
Sbjct: 29 VNYARDFGHNQYSKGKSTF--ESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGID 86
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETV-AII 275
+ + AQ++ + + L V Q+ H +Q + +
Sbjct: 87 NTLISDMRAYLHAAQRHNILIFFTLWNGAVKQST--HYRLNGLM--VDTRKLQSYIDHAL 142
Query: 276 DFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGG 335
+A+ + +L ++MNE P+ ++ ++ + +DT S A
Sbjct: 143 KPMANALKNEKALGGWDIMNE---PEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQ 199
Query: 336 EWSELLSFASNLSRVV 351
E +++ + + V
Sbjct: 200 EIGRFVNWQAAAIKEV 215
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* Length = 344 | Back alignment and structure |
|---|
Score = 80.2 bits (197), Expect = 2e-16
Identities = 50/285 (17%), Positives = 96/285 (33%), Gaps = 45/285 (15%)
Query: 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKP-------------PKPFVGGSLQALDNAFRW 229
+ F +S +GL VR+ + P P LQ LD +
Sbjct: 39 DSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQS 98
Query: 230 AQKYGMKVIVDLHALRVSQNG-----SPHSGSRDGFQEWSDSDIQE-TVAIIDFLASRYA 283
A+++ +K+I+ G + G+ + ++++ Q + + SRYA
Sbjct: 99 AEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTW--YTNTAAQTQYRKYVQAVVSRYA 156
Query: 284 DHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL----------SNRL 333
+ ++ A EL NEP+ D + + + V+ S+ V L
Sbjct: 157 NSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEGLGLSTGDGAY 216
Query: 334 GGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGP 393
+ E FA N+ +D ++L+ D++ N + + + P
Sbjct: 217 PYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGT-----NYTWGNGWIQTHAAACLAAGKP 271
Query: 394 LSFVGEWSCEWEAEGASKRDYQRFAEAQLD-VYGRATFGWAYWAY 437
E+ GA + A Q + R G +W +
Sbjct: 272 C-VFEEY-------GAQQNPCTNEAPWQTTSLTTRGMGGDMFWQW 308
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} Length = 491 | Back alignment and structure |
|---|
Score = 78.6 bits (192), Expect = 1e-15
Identities = 43/361 (11%), Positives = 83/361 (22%), Gaps = 28/361 (7%)
Query: 176 HWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGM 235
W + + + + G NAV + + P P G ++ +D ++ G+
Sbjct: 35 EWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPGSKAPGYAVNEIDKIVERTRELGL 94
Query: 236 KVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMN 295
+++ + + N + Q F A RYA V E+ N
Sbjct: 95 YLVITIGNGANNGN----------------HNAQWARDFWKFYAPRYAKETH-VLYEIHN 137
Query: 296 EPKAP-------DLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLS 348
EP A Y +R Y+ V+L + + A
Sbjct: 138 EPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPVLLFSYAVFGGKGGAAEALKDI 197
Query: 349 RVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEG 408
R F N N+ + + G
Sbjct: 198 RAFNKAVFGNENAVWTNEAVAFHGYAGWQETTIAVEELLKAGYPCFMTEYAGGAWGSGMG 257
Query: 409 ASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHIFS 468
+L+ G + + Y S+ + + +
Sbjct: 258 G----LDVELTYELERLGVSWLTFQYIPPTGVSDDVTKPEYFSALVENSGLSWTPDYGNW 313
Query: 469 SLNEPNDTDKITPIETRFPAYPTVMHVNQIRGILPSRVRSKREDGIKNLKEFGDDYYRPS 528
+ ET + +I + + G Y
Sbjct: 314 PAARGVYGNGGLARETATWINNFLTGTTRIEAEDFDWGGNGVSYYDTDSVNVGGQYRPDE 373
Query: 529 T 529
Sbjct: 374 G 374
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 75.1 bits (184), Expect = 1e-14
Identities = 38/199 (19%), Positives = 74/199 (37%), Gaps = 27/199 (13%)
Query: 17 GTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINET-FYNFRLSNKQF 75
QV L + ++ ++ G + L AN + +TF+L +T FR ++
Sbjct: 260 CAQVVLQAAN-ERNVSTRQGMD--LSAN--QDEETDQETFQLEIDRDTKKCAFRTHTGKY 314
Query: 76 IGLENQGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKGP 135
L G + + ++++ F I ++ R+ RASNG F+ +K Q+ A +
Sbjct: 315 WTLTATG-GVQSTASSKNASCYFDIEWRDR---RITLRASNGKFVTSKKNGQLAASVETA 370
Query: 136 STWEENDPSVFNMTIVS----TMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQ 191
E F M +++ GE+ R + + F+
Sbjct: 371 GDSEL-----FLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSY------DVFQLEFN 419
Query: 192 NGLNAVRIPVG--WWIAYD 208
+G ++ G W + D
Sbjct: 420 DGAYNIKDSTGKYWTVGSD 438
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 47.4 bits (112), Expect = 8e-06
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 11/110 (10%)
Query: 29 KYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAV 88
K++T++ + L A+ + + F + IN FR FIG L A
Sbjct: 353 KFVTSKKNGQ--LAAS--VETAGDSELFLMKLINRPIIVFR-GEHGFIGCRKVTGTLDAN 407
Query: 89 SATEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKGPSTW 138
++ + FQ+ +G + S G + S+ VT+ P +
Sbjct: 408 RSS---YDVFQLEFNDG---AYNIKDSTGKYWTVGSDSAVTSSGDTPVDF 451
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* Length = 493 | Back alignment and structure |
|---|
Score = 44.3 bits (104), Expect = 8e-05
Identities = 30/196 (15%), Positives = 61/196 (31%), Gaps = 23/196 (11%)
Query: 48 SSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFP-EPFQITRKNGE 106
+ + L FR +++ L A AT+ E F + +
Sbjct: 204 ARPEPATGYTL-EFRSGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCA- 261
Query: 107 PHRVRFRASNGYFLQAKSEMQVTADYKGPSTWE----ENDPSVFNMTIVSTMHGEYQITN 162
+V +A+N + + M ++A+ + E E D T G+Y
Sbjct: 262 --QVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDRDTKKCAFR-THTGKYWTLT 318
Query: 163 GYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQA 222
G ++ ++ F ++ +R G ++ G L A
Sbjct: 319 ATGGVQSTASSKNAS------CYFDIEWRDRRITLRASNGKFVTSKK-------NGQLAA 365
Query: 223 LDNAFRWAQKYGMKVI 238
++ + MK+I
Sbjct: 366 SVETAGDSELFLMKLI 381
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Length = 399 | Back alignment and structure |
|---|
Score = 65.2 bits (158), Expect = 2e-11
Identities = 46/279 (16%), Positives = 88/279 (31%), Gaps = 33/279 (11%)
Query: 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGG--SLQALDNAFRWAQKYGMKVIV 239
++ FK + + G+N VR+ + W + GG L+ + A GMK++
Sbjct: 50 KQDIFKTLKEAGVNYVRVRI--WNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLA 107
Query: 240 DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAII-----DFLASRYADHPSLVAIELM 294
D H + + + W++ + ++ + L + A + +++
Sbjct: 108 DFH----YSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVG 163
Query: 295 NEPKAPDL---KLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRV- 350
NE + + AG VR+ S+ V L A L R
Sbjct: 164 NETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRHH 223
Query: 351 ----VIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTS--------DGPLSFVG 398
V +Y FW K ++ + + + TS DG +
Sbjct: 224 VDYDVFASSYYP-FWHGTLK-NLTSVLTSVADTYGKKVMVAETSYTYTAEDGDGHGNTAP 281
Query: 399 E--WSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYW 435
+ + + + R + G A G YW
Sbjct: 282 KNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYW 320
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} Length = 155 | Back alignment and structure |
|---|
Score = 60.8 bits (147), Expect = 3e-11
Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 6/120 (5%)
Query: 23 ISTKLKKYLTAENGSETILMANHNSSST--SSWQTFRLWRINETFYNFRLSNKQFIGLEN 80
I Y+ A + L A H S + F +++++ + +++G+ +
Sbjct: 29 IEMDKGAYIHALDNGLFTLGAPHREVDEGPSPPEQFTAVKLSDSRIALKSGYGKYLGINS 88
Query: 81 QGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKGPSTWEE 140
G +V S E ++ ++G ++ ASN F++ + A K E
Sbjct: 89 DG-LVVGRSDAIGPREQWEPVFQDG---KMALLASNSCFIRCNEAGDIEAKNKTAGEEEM 144
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 Length = 373 | Back alignment and structure |
|---|
Score = 64.2 bits (155), Expect = 3e-11
Identities = 50/301 (16%), Positives = 92/301 (30%), Gaps = 55/301 (18%)
Query: 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGG--SLQALDNAFRWAQKYGMKVIVD 240
F+ S+ +N R P P V Q LD A+KYG+ +I+
Sbjct: 45 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMS 104
Query: 241 LHALRVSQNGSPHSGSRDGFQEW---------------SDSDIQETV-AIIDFLASR--- 281
L N G + + EW ++ ++ + + +R
Sbjct: 105 LV------NNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNT 158
Query: 282 -----YADHPSLVAIELMNEPKAP-DLKLDSLKTYYKAGYDTVRKYSSSAYVIL------ 329
Y D P++++ EL+NEP+ P DL + + + ++ S+ + +
Sbjct: 159 ITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFY 218
Query: 330 ----SNRLGGEWSELLSFASNLSRVVIDV---HFYNLFWDNFNKMSVQQNIDYIYRQRSS 382
+ +F SN ID H Y W Q + +
Sbjct: 219 GNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLPGLTQEAQD--KWASQWIQV 276
Query: 383 DLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVY------GRATFGWAYWA 436
+ + PL + E+ + G + + E G G +W
Sbjct: 277 HIDDSKMLKKPL-LIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQ 335
Query: 437 Y 437
Sbjct: 336 V 336
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* Length = 440 | Back alignment and structure |
|---|
Score = 64.3 bits (155), Expect = 4e-11
Identities = 40/327 (12%), Positives = 88/327 (26%), Gaps = 54/327 (16%)
Query: 161 TNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGS- 219
N + + ++ + G+N +R+ + KP V
Sbjct: 44 VNMWYAAYLGA-PNEVGDRDRLAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF 102
Query: 220 -------LQALDNAFRWAQKYGMKVIVDLHALR---------VSQNGSPHSGSRDGFQEW 263
LQ LD K M V++ + ++ + EW
Sbjct: 103 GNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEW 162
Query: 264 -----------SDSDIQETVA---------IIDFLASRYADHPSLVAIELMNEPK----- 298
Q+ + Y D ++++ +L NEP+
Sbjct: 163 EAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQ 222
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR-LGGEWSELLSFASNLSRVVID---V 354
+ + A ++ + V + G +++ F + ID
Sbjct: 223 TTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTY 282
Query: 355 HFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLS---FVGEWSCEWEAEGASK 411
H + W F+K + + + + +R L+ + E+ + + +
Sbjct: 283 HMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAM 342
Query: 412 RDYQRFAEAQLDVYGRATFGWAYWAYK 438
D Y R F + +
Sbjct: 343 DSTT----EYRDNYFRGVFELMLASLE 365
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* Length = 645 | Back alignment and structure |
|---|
Score = 61.1 bits (147), Expect = 5e-10
Identities = 49/288 (17%), Positives = 95/288 (32%), Gaps = 46/288 (15%)
Query: 174 RDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKY 233
+HW +ED + M + GL+ VRI W +P+P + LD A
Sbjct: 8 PEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRL----EWGWLDEAIATLAAE 63
Query: 234 GMKVIVDLH--------------ALRVSQNGSPH-SGSRDGFQEWSDSDIQETVAIIDFL 278
G+KV++ L V + G G R + S +E I+ L
Sbjct: 64 GLKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLL 123
Query: 279 ASRYADHPSLVAIELMNEPKAPDLKLD-------SLKTYYKAGYDTVRKYSSSAYVILSN 331
A RY ++ + NE D + + + +A Y T+ + + +
Sbjct: 124 AERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWS 183
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD 391
+ ++E+ L + + + D + S Q + Q ++
Sbjct: 184 QRYRSFAEV-----ELPHLTVAEPNPSHLLDYYRFAS-DQVRAFNRLQV--EILRAHAPG 235
Query: 392 GPLS--FVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAY 437
++ F+G ++ D A+ LD ++ +
Sbjct: 236 KFVTHNFMGFFTDL---------DAFALAQ-DLDFASWDSYPLGFTDL 273
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* Length = 383 | Back alignment and structure |
|---|
Score = 59.5 bits (143), Expect = 1e-09
Identities = 45/307 (14%), Positives = 86/307 (28%), Gaps = 62/307 (20%)
Query: 183 EEDFKFMSQNGLNAVRIPV----------------GWWIAYDPKPPKPFVGGSLQALDNA 226
+ + G+ +RI + + LD
Sbjct: 46 DSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISNAQNGFERLDYT 105
Query: 227 FRWAQKYGMKVIVDLHALRVSQNGSP------HSGSRDGFQEWSDSDIQE-TVAIIDFLA 279
A++ G+K+I+ L G D F + D I+E + FL
Sbjct: 106 IAKAKELGIKLIIVLVNNWDDFGGMNQYVRWFGGTHHDDF--YRDERIKEEYKKYVSFLI 163
Query: 280 SR--------YADHPSLVAIELMNEPK-APDLKLDSLKTYYKAGYDTVRKYSSSAYVIL- 329
+ Y + P+++A EL NE + D ++L + K ++ + V +
Sbjct: 164 NHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWVKEMSSYIKSLDPNHLVAVG 223
Query: 330 ----------------SNRLGGEWSELLSFASNLSRVVIDV---HFYNLFWDNFNKMSVQ 370
+ + LS +D H Y W + Q
Sbjct: 224 DEGFFSNYEGFKPYGGEAEWAYNGWSGVDWKKLLSIETVDFGTFHLYPSHWGVSPENYAQ 283
Query: 371 QNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATF 430
+I ++ P+ + E+ A Y+ + + VY
Sbjct: 284 WGAKWI----EDHIKIAKEIGKPV-VLEEYGIPKSAPVNRTAIYRLWNDL---VYDLGGD 335
Query: 431 GWAYWAY 437
G +W
Sbjct: 336 GAMFWML 342
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Length = 334 | Back alignment and structure |
|---|
Score = 52.0 bits (124), Expect = 2e-07
Identities = 33/272 (12%), Positives = 79/272 (29%), Gaps = 46/272 (16%)
Query: 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL 241
T+ ++ G+N++R V W+ +P L + + GM + +DL
Sbjct: 29 TQALETILADAGINSIRQRV--WV--NP----SDGSYDLDYNLELAKRVKAAGMSLYLDL 80
Query: 242 HALRVSQNGSPHSGSRDGFQEWSDSDIQETVAII-----DFLASRYADHPSLVAIELMNE 296
H + + WS +D+ + + + + + I + NE
Sbjct: 81 H----LSDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNE 136
Query: 297 -------PKAPDLKLDSLKTYYKAGYDTVRKYSSS--AYVILSNRLGGEWSELLSFASNL 347
P ++ +G V+ + + +++ G W + F +
Sbjct: 137 IRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYETV 196
Query: 348 SRV---------VIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVG 398
V +Y + + S++ ++ + + V
Sbjct: 197 LATGELLSTDFDYFGVSYYPFYSASATLASLKTSLANLQSTYDKPV-----------VVV 245
Query: 399 EWSCEWEAEGASKRDYQRFAEAQLDVYGRATF 430
E + + + V G+ F
Sbjct: 246 ETNWPVSCPNPAYAFPSDLSSIPFSVAGQQEF 277
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* Length = 675 | Back alignment and structure |
|---|
Score = 51.5 bits (122), Expect = 5e-07
Identities = 27/142 (19%), Positives = 42/142 (29%), Gaps = 19/142 (13%)
Query: 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYG 234
+ W EED + + G++ + V W LD+ K
Sbjct: 18 EQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSY----DFTWLDDIIERLTKEN 73
Query: 235 MKVIVDLH--------------ALRVSQNGSPHS-GSRDGFQEWSDSDIQETVAIIDFLA 279
+ + + LRV G G R S + + + LA
Sbjct: 74 IYLCLATSTGAHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLA 133
Query: 280 SRYADHPSLVAIELMNEPKAPD 301
RY DHP +V + NE
Sbjct: 134 ERYKDHPQIVMWHVSNEYGGYC 155
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} Length = 552 | Back alignment and structure |
|---|
Score = 48.9 bits (116), Expect = 3e-06
Identities = 25/190 (13%), Positives = 61/190 (32%), Gaps = 38/190 (20%)
Query: 174 RDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPK-PFVGGSLQALDNAFRWAQK 232
+ + + + G N V++P+ W +P + F LD A++
Sbjct: 72 PSQM-----AKVWPAIEKVGANTVQVPIA-WEQIEPVEGQFDFSY-----LDLLLEQARE 120
Query: 233 YGMKVIVDLHALRV----------------------SQNGSPHSGSRDGFQEWSDSDIQE 270
+++++ +G + D+D +
Sbjct: 121 RKVRLVLLWFGTWKNSSPSYAPEWVKLDDKRFPRLIKDDGERSYSMSPLAKSTLDADRKA 180
Query: 271 TVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330
VA++ L ++ A +++ +++ NE S++ + A + + V
Sbjct: 181 FVALMTHLKAKDAAQKTVIMVQVENETGT----YGSVRDFGPAAQKVFNGPAPATLVKAV 236
Query: 331 NRLGGEWSEL 340
G WS+
Sbjct: 237 GAKPGTWSQA 246
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 | Back alignment and structure |
|---|
Score = 43.4 bits (101), Expect = 2e-04
Identities = 46/291 (15%), Positives = 83/291 (28%), Gaps = 47/291 (16%)
Query: 156 GEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPF 215
E NG + D I D F+ G+N +R+ A DP
Sbjct: 66 EELSNANGAFETSYIDALADPK---ICLRDIPFLKMLGVNTLRV-----YAIDPT----- 112
Query: 216 VGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAII 275
++ D GM V++DL P W + ++I
Sbjct: 113 -----KSHDICMEALSAEGMYVLLDL--------SEPDISINRENPSWDVHIFERYKSVI 159
Query: 276 DFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKY-----SSSAYVILS 330
D + P+L+ N+ D + KA ++Y V S
Sbjct: 160 D----AMSSFPNLLGYFAGNQV-TNDHTNTFASPFVKAAIRDAKEYISHSNHRKIPVGYS 214
Query: 331 NRLGGEWSELLSFASNLSRVVIDVHFYNLF-WDNFNKMSVQQNIDYIYRQRSSDLRNVTT 389
+ L+ V D + N++ W ++ YR+R+ +
Sbjct: 215 TNDDAMTRDNLARYFVCGDVKADFYGINMYEWCGYSTYGTSG-----YRERTKEFEGYPI 269
Query: 390 SDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVY-GRATFGWAYWAYKF 439
P+ F E+ C + V+ G + + ++
Sbjct: 270 ---PV-FFSEFGCNLVRPRPFTEVSALYGNKMSSVWSGGLAYMYFEEENEY 316
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 535 | |||
| 3n9k_A | 399 | Glucan 1,3-beta-glucosidase; aromatic entranceway/ | 100.0 | |
| 1h4p_A | 408 | Glucan 1,3-beta-glucosidase I/II; hydrolase, gluca | 100.0 | |
| 3qho_A | 458 | Endoglucanase, 458AA long hypothetical endo-1,4-be | 100.0 | |
| 3ndz_A | 345 | Endoglucanase D; cellotriose, xylanase, carbohydra | 100.0 | |
| 1ece_A | 358 | Endocellulase E1; glycosyl hydrolase; HET: BGC; 2. | 100.0 | |
| 1ceo_A | 343 | Cellulase CELC; glycosyl hydrolase, family A/5 of | 100.0 | |
| 1vjz_A | 341 | Endoglucanase; TM1752, structural genomics, JCSG, | 100.0 | |
| 3nco_A | 320 | Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1 | 100.0 | |
| 7a3h_A | 303 | Endoglucanase; hydrolase, cellulose degradation, g | 100.0 | |
| 3qr3_A | 340 | Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A | 100.0 | |
| 3pzt_A | 327 | Endoglucanase; alpha/beta barrel, glycosyl hydrola | 100.0 | |
| 3ayr_A | 376 | Endoglucanase; TIM barrel, hydrolase, carbohydrate | 100.0 | |
| 1h1n_A | 305 | Endo type cellulase ENGI; hydrolase, glycosyl hydr | 100.0 | |
| 1edg_A | 380 | Endoglucanase A; family A, cellulases, xylanases, | 100.0 | |
| 3l55_A | 353 | B-1,4-endoglucanase/cellulase; putative beta-1,4-e | 100.0 | |
| 3aof_A | 317 | Endoglucanase; glycosyl hydrolase family 5, cellul | 100.0 | |
| 1tvn_A | 293 | Cellulase, endoglucanase G; glycoside hydrolase, C | 99.98 | |
| 3icg_A | 515 | Endoglucanase D; cellulase, xylanase, carbohydrate | 99.98 | |
| 4hty_A | 359 | Cellulase; (alpha/beta)8 barrel, family 5 endogluc | 99.97 | |
| 2jep_A | 395 | Xyloglucanase; family 5, plant cell WALL, hydrolas | 99.97 | |
| 1g01_A | 364 | Endoglucanase; alpha/beta barrel, TIM barrel, hydr | 99.97 | |
| 1egz_A | 291 | Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CL | 99.97 | |
| 2osx_A | 481 | Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel | 99.97 | |
| 2whl_A | 294 | Beta-mannanase, baman5; glycoside hydrolase, hydro | 99.97 | |
| 2cks_A | 306 | Endoglucanase E-5; carbohydrate metabolism, polysa | 99.97 | |
| 3jug_A | 345 | Beta-mannanase; TIM-barrel, glycosidase, hydrolase | 99.97 | |
| 1wky_A | 464 | Endo-beta-1,4-mannanase; TIM barrel, catalytic dom | 99.97 | |
| 1bqc_A | 302 | Protein (beta-mannanase); glycosyl hydrolase, fami | 99.97 | |
| 2y8k_A | 491 | Arabinoxylanase, carbohydrate binding family 6; hy | 99.95 | |
| 3pzg_A | 383 | Mannan endo-1,4-beta-mannosidase. glycosyl hydrol | 99.94 | |
| 1rh9_A | 373 | Endo-beta-mannanase; endo-beta-mannase, retaining, | 99.94 | |
| 1uuq_A | 440 | Mannosyl-oligosaccharide glucosidase; hydrolase, m | 99.93 | |
| 1qnr_A | 344 | Endo-1,4-B-D-mannanase; hydrolase, anomalous scatt | 99.92 | |
| 2c0h_A | 353 | Mannan endo-1,4-beta-mannosidase; hydrolase, signa | 99.91 | |
| 3vup_A | 351 | Beta-1,4-mannanase; TIM barrel, digestive fluid, H | 99.87 | |
| 4awe_A | 387 | Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana | 99.87 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 99.82 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 99.77 | |
| 2j78_A | 468 | Beta-glucosidase A; family 1, hydrolase, inhibitor | 99.76 | |
| 1hjs_A | 332 | Beta-1,4-galactanase; 4-galactanases, family 53 gl | 99.76 | |
| 1vff_A | 423 | Beta-glucosidase; glycosyl hydrolase, membrane-bou | 99.75 | |
| 3fj0_A | 465 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase | 99.75 | |
| 1ur4_A | 399 | Galactanase; hydrolase, beta-1, glycoside hydrolas | 99.69 | |
| 3apg_A | 473 | Beta-glucosidase; TIM barrel, hydrolase, sugar bin | 99.68 | |
| 3llp_A | 493 | Fascin; beta-trefoil, actin bundling protein, canc | 99.67 | |
| 1kwg_A | 645 | Beta-galactosidase; TIM barrel, glycoside hydrolas | 99.66 | |
| 3hn3_A | 613 | Beta-G1, beta-glucuronidase; lysosomal enzyme, aci | 99.66 | |
| 1e4i_A | 447 | Beta-glucosidase; hydrolase, family 1 glycosyl hyd | 99.66 | |
| 1ug6_A | 431 | Beta-glycosidase; glucosidase, atomic resolution, | 99.66 | |
| 3ahx_A | 453 | Beta-glucosidase A; cellulases, glycosyl hydrolase | 99.66 | |
| 1qox_A | 449 | Beta-glucosidase; hydrolase, cellulose degradation | 99.65 | |
| 2xhy_A | 479 | BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, | 99.65 | |
| 2o9p_A | 454 | Beta-glucosidase B; family 1 glycoside hydrolase; | 99.64 | |
| 1uwi_A | 489 | Beta-galactosidase; hydrolase, beta-glycosidase, g | 99.64 | |
| 1fob_A | 334 | Beta-1,4-galactanase; B/A barrel, glycosyl hydrola | 99.63 | |
| 4ha4_A | 489 | Beta-galactosidase; TIM barrel, beta-glycosidase, | 99.63 | |
| 3ta9_A | 458 | Glycoside hydrolase family 1; TIM barrel, glucosid | 99.63 | |
| 1gnx_A | 479 | Beta-glucosidase; hydrolase, glycosyltransferase, | 99.62 | |
| 4hz8_A | 444 | Beta-glucosidase; BGLB,BGL, hydrolase, glycosid ba | 99.62 | |
| 3tty_A | 675 | Beta-GAL, beta-galactosidase; TIM barrel, glycosid | 99.61 | |
| 1qvb_A | 481 | Beta-glycosidase; TIM-barrel, thermostable, hydrol | 99.61 | |
| 1pbg_A | 468 | PGAL, 6-phospho-beta-D-galactosidase; hydrolase (g | 99.61 | |
| 3lpf_A | 605 | Beta-glucuronidase; alpha/beta barrel, sugar-bindi | 99.6 | |
| 4b3l_A | 479 | Beta-glucosidase; hydrolase, glycosidase, carbohyd | 99.59 | |
| 3vii_A | 487 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.57 | |
| 3f5l_A | 481 | Beta-glucosidase; beta-alpha-barrels, glycosidase, | 99.57 | |
| 3gnp_A | 488 | OS03G0212800 protein; beta-alpha barrel, glycosida | 99.57 | |
| 3qom_A | 481 | 6-phospho-beta-glucosidase; structural genomics, P | 99.57 | |
| 4dde_A | 480 | 6-phospho-beta-glucosidase; structural genomics, P | 99.55 | |
| 3ptm_A | 505 | Beta-glucosidase OS4BGlu12; beta-alpha barrel, gly | 99.54 | |
| 2e9l_A | 469 | Cytosolic beta-glucosidase; novel cytosolic neutra | 99.54 | |
| 4a3y_A | 540 | Raucaffricine-O-beta-D-glucosidase; hydrolase, alk | 99.54 | |
| 4atd_A | 513 | Raucaffricine-O-beta-D-glucosidase; alkaloid, hydr | 99.53 | |
| 1v08_A | 512 | Beta-glucosidase; glycoside hydrolase, dimboa-gluc | 99.53 | |
| 1wcg_A | 464 | Thioglucosidase, myrosinase; aphid, beta-glucosida | 99.53 | |
| 2e3z_A | 465 | Beta-glucosidase; TIM barrel, glycoside hydrolase | 99.52 | |
| 2dga_A | 565 | Beta-glucosidase; alpha/beta barrel, hydrolase; 1. | 99.51 | |
| 1v02_A | 565 | Dhurrinase, dhurrinase-1; beta-glucosidase, dhurri | 99.51 | |
| 1cbg_A | 490 | Cyanogenic beta-glucosidase; hydrolase (O-glycosyl | 99.5 | |
| 1e4m_M | 501 | Myrosinase MA1; hydrolase, family 1 glycosyl hydro | 99.49 | |
| 2jf7_A | 532 | Strictosidine-O-beta-D-glucosidase; alkaloid, hydr | 99.48 | |
| 3ahy_A | 473 | Beta-glucosidase; cellulases, glycosyl hydrolase, | 99.46 | |
| 1w91_A | 503 | Beta-xylosidase; MAD, seMet, tetramer, hydrolase; | 99.44 | |
| 2w61_A | 555 | GAS2P, glycolipid-anchored surface protein 2; glyc | 99.44 | |
| 3fn9_A | 692 | Putative beta-galactosidase; structural genomics, | 99.4 | |
| 3cmg_A | 667 | Putative beta-galactosidase; structural genomics, | 99.39 | |
| 1uhv_A | 500 | Beta-xylosidase; family 39 glycoside hydrolase, xy | 99.38 | |
| 4ekj_A | 500 | Beta-xylosidase; TIM-barrel fold, hemicellulase, h | 99.35 | |
| 3d3a_A | 612 | Beta-galactosidase; protein structure initiative I | 99.26 | |
| 3civ_A | 343 | Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. | 99.25 | |
| 1xyz_A | 347 | 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola | 99.23 | |
| 1nq6_A | 302 | XYS1; glycoside hydrolase family 10, xylanase, xyl | 99.22 | |
| 3oba_A | 1032 | Beta-galactosidase; TIM barrel, tetramer, GH2, gly | 99.2 | |
| 1yq2_A | 1024 | Beta-galactosidase; glycosyl hydrolase family 2, T | 99.2 | |
| 1vem_A | 516 | Beta-amylase; beta-alpha-barrels, optimum PH, hydr | 99.2 | |
| 2yug_A | 155 | Protein FRG1; spliceosome, facioscapulohumeral mus | 99.17 | |
| 3cui_A | 315 | EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine | 99.16 | |
| 1jz7_A | 1023 | Lactase, beta-galactosidase, LACZ; TIM barrel (alp | 99.15 | |
| 3bga_A | 1010 | Beta-galactosidase; NYSGXRC, protein structure ini | 99.11 | |
| 1v0l_A | 313 | Endo-1,4-beta-xylanase A; glycoside hydrolase fami | 99.09 | |
| 1ta3_B | 303 | Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), | 99.08 | |
| 1tg7_A | 971 | Beta-galactosidase; TIM barrel domain, glycoside h | 99.07 | |
| 2je8_A | 848 | Beta-mannosidase; glycoside hydrolase, hydrolase; | 99.05 | |
| 2d1z_A | 436 | Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en | 99.04 | |
| 3gm8_A | 801 | Glycoside hydrolase family 2, candidate beta-GLYC; | 99.02 | |
| 1i1w_A | 303 | Endo-1,4-beta-xylanase; xylan degradation, hydrola | 99.02 | |
| 1n82_A | 331 | Xylanase, intra-cellular xylanase; hydrolase; 1.45 | 98.99 | |
| 3u7v_A | 552 | Beta-galactosidase; structural genomics, PSI-biolo | 98.99 | |
| 3thd_A | 654 | Beta-galactosidase; TIM-barrel domain, glycosyl hy | 98.96 | |
| 2dep_A | 356 | Xylanase B, thermostable celloxylanase; glycosidas | 98.95 | |
| 1us2_A | 530 | Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca | 98.9 | |
| 2uwf_A | 356 | Endoxylanase, alkaline active endoxylanase; hydrol | 98.89 | |
| 1ur1_A | 378 | Endoxylanase; hydrolase, family 10, glycoside hydr | 98.87 | |
| 1w32_A | 348 | Endo-1,4-beta-xylanase A precursor; mutant, calciu | 98.81 | |
| 4e8d_A | 595 | Glycosyl hydrolase, family 35; TIM barrel, beta-pr | 98.81 | |
| 3og2_A | 1003 | Beta-galactosidase; TIM barrel domain, glycoside h | 98.77 | |
| 1r85_A | 379 | Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A | 98.77 | |
| 3niy_A | 341 | Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 | 98.71 | |
| 2vzs_A | 1032 | CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, | 98.63 | |
| 3emz_A | 331 | Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 ba | 98.58 | |
| 1qw9_A | 502 | Arabinosidase, alpha-L-arabinofuranosidase; hydrol | 98.54 | |
| 2c7f_A | 513 | Alpha-L-arabinofuranosidase; glycosidase, xylan, a | 98.53 | |
| 4h4g_A | 160 | (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; | 98.52 | |
| 3u7b_A | 327 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.47 | |
| 2y2w_A | 574 | Arabinofuranosidase; hydrolase, arabinoxylan, glyc | 98.46 | |
| 4f8x_A | 335 | Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET | 98.3 | |
| 3ug3_A | 504 | Alpha-L-arabinofuranosidase; TIM barrel, hydrolase | 98.3 | |
| 3kzs_A | 463 | Glycosyl hydrolase family 5; structural genomics, | 98.29 | |
| 4i83_A | 152 | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; | 98.22 | |
| 2vrq_A | 496 | Alpha-L-arabinofuranosidase; hydrolase, glycosidas | 98.21 | |
| 4h41_A | 340 | Putative alpha-L-fucosidase; hydrolase, carbohydra | 98.18 | |
| 3vny_A | 488 | Beta-glucuronidase; TIM barrel, greek-KEY, glycosi | 98.06 | |
| 2gll_A | 171 | FABZ, (3R)-hydroxymyristoyl-acyl carrier protein d | 98.02 | |
| 1z6b_A | 154 | Pffabz, fatty acid synthesis protein; malaria, bet | 97.99 | |
| 3clw_A | 507 | Conserved exported protein; structural genomics, u | 97.98 | |
| 1u1z_A | 168 | (3R)-hydroxymyristoyl-[acyl carrier protein] dehyd | 97.94 | |
| 2y24_A | 383 | Xylanase; hydrolase, GH5 family, aldotetraouronic | 97.92 | |
| 2w5f_A | 540 | Endo-1,4-beta-xylanase Y; cellulosome, glycosidase | 97.9 | |
| 3gyc_A | 393 | Putative glycoside hydrolase; YP_001304622.1, stru | 97.87 | |
| 2wnw_A | 447 | Activated by transcription factor SSRB; hydrolase, | 97.72 | |
| 3ur8_A | 323 | Glucan endo-1,3-beta-D-glucosidase; glucoside hydr | 97.6 | |
| 1ghs_A | 306 | 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg | 97.49 | |
| 3ro8_A | 341 | Endo-1,4-beta-xylanase; glycosyl hydrolase family | 97.41 | |
| 2nt0_A | 497 | Glucosylceramidase; cerezyme, glucocerebrosidase, | 97.39 | |
| 2cyg_A | 312 | Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be | 97.29 | |
| 1aq0_A | 306 | 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl | 97.06 | |
| 3em5_A | 316 | Beta-1,3-glucanase; glycoprotein, rossmann fold, ( | 97.0 | |
| 4aw7_A | 591 | GH86A beta-porphyranase; hydrolase, porphyran-hexa | 96.7 | |
| 3kl0_A | 401 | Glucuronoxylanase XYNC; alpha beta barrel, (beta/a | 96.59 | |
| 1wdp_A | 495 | Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.2 | 96.36 | |
| 1fa2_A | 498 | Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.3 | 96.32 | |
| 2xfr_A | 535 | Beta-amylase; hydrolase, carbohydrate metabolism, | 96.27 | |
| 2yih_A | 524 | CEL44C, xyloglucanase; hydrolase, GH44, endo-gluca | 96.09 | |
| 1ea9_C | 583 | Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A | 95.99 | |
| 2dh2_A | 424 | 4F2 cell-surface antigen heavy chain; TIM-barrel, | 95.83 | |
| 3zr5_A | 656 | Galactocerebrosidase; hydrolase, GALC, glycosyl hy | 95.6 | |
| 1j0h_A | 588 | Neopullulanase; beta-alpha-barrels, hydrolase; 1.9 | 95.54 | |
| 1wzl_A | 585 | Alpha-amylase II; pullulan, GH-13, alpha-amylase f | 95.27 | |
| 2vx5_A | 396 | Cellvibrio japonicus mannanase cjman26C; hydrolase | 95.26 | |
| 4a4a_A | 914 | Alpha-N-acetylglucosaminidase family protein; hydr | 95.22 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 95.21 | |
| 3ik2_A | 517 | Endoglucanase A; TIM-like barrel, hydrolase; 2.20A | 94.92 | |
| 3k1d_A | 722 | 1,4-alpha-glucan-branching enzyme; mycobacterium t | 94.91 | |
| 3ii1_A | 535 | Cellulase; CELM2, glucanase-xyanase, glucanase, xy | 94.77 | |
| 2e4t_A | 519 | Endoglucanase, xyloglucanase; TIM barrel, TIM-like | 94.66 | |
| 3edf_A | 601 | FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin c | 94.63 | |
| 3tp4_A | 475 | Computational design of enzyme; structural genomic | 94.58 | |
| 2z1k_A | 475 | (NEO)pullulanase; hydrolase, structural genomics, | 94.49 | |
| 1jlx_A | 303 | Agglutinin, amaranthin, ACA; complex (lectin/sacch | 94.41 | |
| 2wan_A | 921 | Pullulanase; hydrolase, glycoside hydrolase, polys | 94.35 | |
| 3aml_A | 755 | OS06G0726400 protein; starch-branching, transferas | 94.25 | |
| 3faw_A | 877 | Reticulocyte binding protein; TIM barrel, beta bar | 94.05 | |
| 3dhu_A | 449 | Alpha-amylase; structural genomics, hydrolase, gly | 94.04 | |
| 2e8y_A | 718 | AMYX protein, pullulanase; multiple domain, beta-a | 93.88 | |
| 1g94_A | 448 | Alpha-amylase; beta-alpha-8-barrel, 3 domain struc | 93.72 | |
| 2v3g_A | 283 | Endoglucanase H; beta-1 4 beta-1 3 glucanase, lich | 93.59 | |
| 4gqr_A | 496 | Pancreatic alpha-amylase; glycosyl hydrolase, diab | 93.59 | |
| 2ya0_A | 714 | Putative alkaline amylopullulanase; hydrolase, gly | 93.42 | |
| 1m7x_A | 617 | 1,4-alpha-glucan branching enzyme; alpha/beta barr | 93.31 | |
| 4aie_A | 549 | Glucan 1,6-alpha-glucosidase; hydrolase, glycoside | 92.67 | |
| 1jlx_A | 303 | Agglutinin, amaranthin, ACA; complex (lectin/sacch | 92.38 | |
| 1gcy_A | 527 | Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-b | 92.37 | |
| 2ya1_A | 1014 | Putative alkaline amylopullulanase; hydrolase, gly | 92.29 | |
| 1lwj_A | 441 | 4-alpha-glucanotransferase; alpha-amylase family, | 91.97 | |
| 3q62_A | 175 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; | 91.55 | |
| 4aef_A | 645 | Neopullulanase (alpha-amylase II); hydrolase, ther | 91.43 | |
| 3vsf_A | 526 | Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactana | 91.27 | |
| 4acy_A | 382 | Endo-alpha-mannosidase; hydrolase, endomannosidase | 91.08 | |
| 2fhf_A | 1083 | Pullulanase; multiple domain, beta-alpha-barrel, a | 91.04 | |
| 1jae_A | 471 | Alpha-amylase; glycosidase, carbohydrate metabolis | 90.86 | |
| 1ht6_A | 405 | AMY1, alpha-amylase isozyme 1; barley, beta-alpha- | 90.85 | |
| 2vr5_A | 718 | Glycogen operon protein GLGX; hydrolase, glycosida | 90.8 | |
| 1bf2_A | 750 | Isoamylase; hydrolase, glycosidase, debranching en | 90.58 | |
| 2wc7_A | 488 | Alpha amylase, catalytic region; CD/PUL-hydrolyzin | 90.47 | |
| 4b0b_A | 171 | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; | 90.36 | |
| 2guy_A | 478 | Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; | 90.29 | |
| 1wpc_A | 485 | Glucan 1,4-alpha-maltohexaosidase; maltohexaose-pr | 89.83 | |
| 2wsk_A | 657 | Glycogen debranching enzyme; carbohydrate metaboli | 89.81 | |
| 2aaa_A | 484 | Alpha-amylase; glycosidase; 2.10A {Aspergillus nig | 89.72 | |
| 1ud2_A | 480 | Amylase, alpha-amylase; calcium-free, alkaline, hy | 89.59 | |
| 1qho_A | 686 | Alpha-amylase; glycoside hydrolase, starch degrada | 89.54 | |
| 3bh4_A | 483 | Alpha-amylase; calcium, carbohydrate metabolism, g | 89.4 | |
| 3vgf_A | 558 | Malto-oligosyltrehalose trehalohydrolase; alpha/be | 89.36 | |
| 2ze0_A | 555 | Alpha-glucosidase; TIM barrel, glucoside hydrolase | 89.3 | |
| 3aj6_A | 286 | Main hemagglutinin component; toxin, beta-trefoil; | 89.27 | |
| 1uok_A | 558 | Oligo-1,6-glucosidase; sugar degradation, hydrolas | 89.27 | |
| 1m53_A | 570 | Isomaltulose synthase; klebsiella SP. LX3, sucrose | 89.26 | |
| 1hvx_A | 515 | Alpha-amylase; hydrolase, glycosyltransferase, the | 89.15 | |
| 2bhu_A | 602 | Maltooligosyltrehalose trehalohydrolase; alpha-amy | 89.11 | |
| 1zja_A | 557 | Trehalulose synthase; sucrose isomerase, alpha-amy | 89.08 | |
| 4ad1_A | 380 | Glycosyl hydrolase family 71; glycoside hydrolase | 88.87 | |
| 1wza_A | 488 | Alpha-amylase A; hydrolase, halophilic, thermophil | 88.67 | |
| 1ua7_A | 422 | Alpha-amylase; beta-alpha-barrels, acarbose, greek | 88.44 | |
| 2zic_A | 543 | Dextran glucosidase; TIM barrel, (beta/alpha)8-bar | 88.43 | |
| 3zss_A | 695 | Putative glucanohydrolase PEP1A; alpha-glucan bios | 88.42 | |
| 1odz_A | 386 | Mannanase A; hydrolase, family 26, glycoside-hydro | 88.22 | |
| 1mxg_A | 435 | Alpha amylase; hyperthermostable, family 13 glycos | 88.12 | |
| 3aj7_A | 589 | Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydro | 87.99 | |
| 3nbc_A | 148 | Ricin B-like lectin; lactose, sugar BIND protein; | 87.72 | |
| 3czg_A | 644 | Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; | 87.65 | |
| 1g5a_A | 628 | Amylosucrase; glycosyltransferase, glycoside hydro | 87.48 | |
| 3k8k_A | 669 | Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, bet | 87.39 | |
| 4aee_A | 696 | Alpha amylase, catalytic region; hydrolase, hypert | 87.33 | |
| 2wvv_A | 450 | Alpha-L-fucosidase; alpha-L-fucose, hydrolase, gly | 87.05 | |
| 3m07_A | 618 | Putative alpha amylase; IDP00968, csgid, structura | 86.81 | |
| 3ef2_A | 293 | Agglutinin, lectin; beta-trefoil, calcium-binding, | 86.72 | |
| 3bmv_A | 683 | Cyclomaltodextrin glucanotransferase; glycosidase, | 86.21 | |
| 1d3c_A | 686 | Cyclodextrin glycosyltransferase; alpha-amylase, p | 86.15 | |
| 2cf2_C | 342 | Fatty acid synthase, DH domain; transferase, fatty | 86.08 | |
| 1cyg_A | 680 | Cyclodextrin glucanotransferase; glycosyltransfera | 86.02 | |
| 3ues_A | 478 | Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydr | 85.83 | |
| 3bc9_A | 599 | AMYB, alpha amylase, catalytic region; acarbose, t | 85.82 | |
| 4aio_A | 884 | Limit dextrinase; hydrolase, pullulanase, glycosid | 85.17 | |
| 3ttq_A | 1108 | Dextransucrase; (beta/alpha)8 barrel, transferase; | 85.06 | |
| 3aie_A | 844 | Glucosyltransferase-SI; beta-alpha-barrels; HET: M | 85.0 | |
| 3ucq_A | 655 | Amylosucrase; thermostability, amylose synthesis, | 84.64 | |
| 1gjw_A | 637 | Maltodextrin glycosyltransferase; alpha-amylase, m | 84.49 | |
| 3eyp_A | 469 | Putative alpha-L-fucosidase; structural genomics, | 84.47 | |
| 3snv_A | 143 | Symfoil-4T/permutation #1 synthetic protein; beta- | 83.55 | |
| 1iv8_A | 720 | Maltooligosyl trehalose synthase; beta alpha barre | 82.96 | |
| 3pg0_A | 165 | Threefoil; symmetric design, beta-trefoil, enginee | 82.81 | |
| 2cf2_C | 342 | Fatty acid synthase, DH domain; transferase, fatty | 82.43 | |
| 1ji1_A | 637 | Alpha-amylase I; beta/alpha barrel, hydrolase; 1.6 | 81.87 | |
| 3klk_A | 1039 | Glucansucrase; native form, open conformation, mul | 81.17 | |
| 3hje_A | 704 | 704AA long hypothetical glycosyltransferase; treha | 80.23 |
| >3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-52 Score=437.70 Aligned_cols=331 Identities=30% Similarity=0.562 Sum_probs=270.8
Q ss_pred CceeEEEecC-CceEEEecccEEecCCCCCCCcccCCcccceec-c----cccccccchhhhccChhhhhHhHHhhhCcc
Q 046395 107 PHRVRFRASN-GYFLQAKSEMQVTADYKGPSTWEENDPSVFNMT-I----VSTMHGEYQITNGYGPDKAAKLMRDHWKSY 180 (535)
Q Consensus 107 ~~~v~I~~~n-G~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~-~----~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ 180 (535)
+...+|+..| |+||.. ..| ++|++|..+ . .....+||++++.+|.+.+..++++||++|
T Consensus 9 ~~~~~~rGVNlGgWlvl-------------E~w--itps~f~~~~~~~~~~~~~~dE~~l~~~lG~~~a~~~~~~hw~~~ 73 (399)
T 3n9k_A 9 YDNNVIRGVNLGGWFVL-------------EPY--MTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTW 73 (399)
T ss_dssp TTTCCEEEEECTTSSSC-------------CTT--TSGGGTGGGCBTTBCTTSCCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCceeeEEehhhhhcc-------------CCc--cCchhhhcccCccccCcccccHHHHHHHhCHHHHHHHHHHhhccc
Confidence 3445677777 777633 235 889999864 2 124578999999999999999999999999
Q ss_pred chHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGF 260 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~ 260 (535)
+|++||+.||++|+|+|||||+||.+ ++.++.||..+.+++||++|++|.++||+||||+|+.||+||+++++|.. +.
T Consensus 74 ite~D~~~ik~~G~N~VRipi~~~~~-~~~~~~py~~~~~~~ld~vV~~a~~~Gl~VILDlH~~pG~qng~~~sG~~-~~ 151 (399)
T 3n9k_A 74 ITEQDFKQISNLGLNFVRIPIGYWAF-QLLDNDPYVQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLR-DS 151 (399)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEEGGGT-CCCTTCCCCCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSST-TC
T ss_pred CcHHHHHHHHHcCCCEEEEcccHHHc-cCCCCCccchhHHHHHHHHHHHHHHCCCEEEEEecCCCcccccccCCCCC-CC
Confidence 99999999999999999999999875 55566678777999999999999999999999999999999999988865 34
Q ss_pred CCCC-hHHHHHHHHHHHHHHHHhCCC---CcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCC--
Q 046395 261 QEWS-DSDIQETVAIIDFLASRYADH---PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-- 334 (535)
Q Consensus 261 ~~W~-~~~~~~~~~~~~~la~ry~~~---p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g-- 334 (535)
..|. +.++++++++|+.||+||+++ |.|++|||+|||..+..+...|+.|+++++++||+++|+++|++++++.
T Consensus 152 ~~w~~~~~~~~~~~~w~~iA~ry~~~~y~~~V~~~el~NEP~~~~~~~~~~~~~~~~a~~~IR~~~p~~~Iii~dg~~~~ 231 (399)
T 3n9k_A 152 YNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAAQVF 231 (399)
T ss_dssp CCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEEESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhhcccCCCceEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCeEEEeCCCCCh
Confidence 5676 679999999999999999999 9999999999999755568899999999999999999999999987664
Q ss_pred CChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCC------
Q 046395 335 GEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEG------ 408 (535)
Q Consensus 335 ~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~------ 408 (535)
..|..++..+..++|+|||+|+|.+|+.....++.++++..+|+... .+.+. ..|+|||||+++.+.|.
T Consensus 232 ~~W~~~l~~~~~~~nvv~d~H~Y~~f~~~~~~~~~~~~i~~~c~~~~----~~~~~-~~~~ivGEwS~a~~dc~~~lng~ 306 (399)
T 3n9k_A 232 GYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGW----DAKKE-SHWNVAGSWSAALTDCAKWLNGV 306 (399)
T ss_dssp TTTTTSSCGGGTCCSEEEEEECCSCSSHHHHTSCHHHHHHHHHHHHH----HHHTC-SSEEEEEECCSCSSSCSTTTTCT
T ss_pred HHHHhhcccccCCCCEEEEeccccCCCcccccCCHHHHHHHHHHHHH----HHhcC-CCCEEEEecccccccchhhccCC
Confidence 45666665545679999999999999877777889999999987432 23333 35699999998753210
Q ss_pred ------------------------------CCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCCccccc
Q 046395 409 ------------------------------ASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLH 458 (535)
Q Consensus 409 ------------------------------~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~~~ 458 (535)
..++.+++|+++|+++|++ +.||+||+||.++++ .
T Consensus 307 ~~g~r~~gt~~~~~~~g~c~~~~~~~~~~~~~k~~~~~f~~aQ~~~~e~-~~Gw~fWtwK~e~~~--------------~ 371 (399)
T 3n9k_A 307 NRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEAQLDAFEY-TGGWVFWSWKTENAP--------------E 371 (399)
T ss_dssp TCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHHHHHHHHHHHHHHHT-TTEEEESCSCCSSCG--------------G
T ss_pred CccccccccCCCCCcCCcCcCcCccccccHHHHHHHHHHHHHHHHHHHc-CCcEEEeeeecCCCC--------------C
Confidence 0245689999999999997 459999999997532 5
Q ss_pred cccccccccCcCCCCC
Q 046395 459 WQTQVTHIFSSLNEPN 474 (535)
Q Consensus 459 W~~~~~~~~~~l~~~n 474 (535)
|+.+..+....|.+|.
T Consensus 372 W~~~~~~~~g~~p~~~ 387 (399)
T 3n9k_A 372 WSFQTLTYNGLFPQPV 387 (399)
T ss_dssp GCHHHHHHTTCSCSST
T ss_pred CCHHHHHhCCCcCCCh
Confidence 7777766555565543
|
| >1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-48 Score=408.25 Aligned_cols=310 Identities=28% Similarity=0.541 Sum_probs=247.8
Q ss_pred CCcccceecccc-----c-ccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCC
Q 046395 141 NDPSVFNMTIVS-----T-MHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKP 214 (535)
Q Consensus 141 ~~ps~f~~~~~~-----~-~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~ 214 (535)
++|++|...... . +.+||++++.+|.+++..++++||++++|++||+.||++|+|+|||||+||.+ ++.++.|
T Consensus 28 i~p~~f~~~~~~~~~~~~~~~dE~~l~~~lG~~~a~~~~~~hw~~~~te~d~~~i~~~G~N~VRipi~~~~~-~~~~~~p 106 (408)
T 1h4p_A 28 ITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAF-QILDDDP 106 (408)
T ss_dssp TSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGT-CCCTTCC
T ss_pred cCchhhhhhcccccccccccccHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEccCCHHHc-ccCCCCC
Confidence 677888654321 1 47899999999999999999999999999999999999999999999999865 5556667
Q ss_pred Cccc-hHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCC---CcEE
Q 046395 215 FVGG-SLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRYADH---PSLV 289 (535)
Q Consensus 215 ~~~~-~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~---p~V~ 289 (535)
|..+ .+++||++|++|+++||+||||+|+.||+||+++++|.. +...|. +.+.++++++|++||+||+++ |.|+
T Consensus 107 y~~~~~l~~ld~vv~~a~~~Gi~VilDlH~~pG~qng~~~sG~~-~~~~w~~~~~~~~~~~~w~~ia~ry~~~~y~~~Vi 185 (408)
T 1h4p_A 107 YVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLR-DSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVI 185 (408)
T ss_dssp CCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSST-TCCCTTSHHHHHHHHHHHHHHHHHTTSHHHHTTEE
T ss_pred CccccHHHHHHHHHHHHHHCCCEEEEECCCCCCccCCccCCCCC-CCCCCCCHHHHHHHHHHHHHHHHHHcccCCCCeEE
Confidence 8777 999999999999999999999999999999999888754 556776 788999999999999999998 9999
Q ss_pred EEEeecCCCCCCCChHHHH-HHHHHHHHHHHhc-CCCcEEEEcCCCC--CChhhhhcccCCCCcEEEEEeecCcCCCccc
Q 046395 290 AIELMNEPKAPDLKLDSLK-TYYKAGYDTVRKY-SSSAYVILSNRLG--GEWSELLSFASNLSRVVIDVHFYNLFWDNFN 365 (535)
Q Consensus 290 ~~el~NEP~~~~~~~~~~~-~~~~~~~~aIR~~-~p~~~ii~~~~~g--~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~ 365 (535)
+|||+|||.....+...++ .|+++++++||++ +++++|++++++. ..|..++......+++||++|+|.+|.....
T Consensus 186 ~~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~~iii~dg~~~~~~w~~~l~~~~~~~nvv~s~H~Y~~~~~~~~ 265 (408)
T 1h4p_A 186 GIELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQL 265 (408)
T ss_dssp EEESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEEEEEEECSCSSHHHH
T ss_pred EEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCceEeeecccCchhhhhhccccCCCCCEEEEeeeccCCCCccc
Confidence 9999999997545678998 9999999999999 8888878775542 4456665544457899999999998764434
Q ss_pred CCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC------------------------------C-------
Q 046395 366 KMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE------------------------------G------- 408 (535)
Q Consensus 366 ~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~------------------------------~------- 408 (535)
..+.++++..++.... .+. ..+.|+||||||+....| .
T Consensus 266 ~~~~~~~i~~~~~~~~----~~~-~~~~pvivGE~g~~~~dc~~~lng~~~g~~~~g~~~~~~~~~~~~~~c~~~~~~~~ 340 (408)
T 1h4p_A 266 ERSIDEHIKVACEWGT----GVL-NESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAY 340 (408)
T ss_dssp TCCHHHHHHHHHHHHH----HHT-TCSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGG
T ss_pred cCCHHHHHHHHHHHHH----HHh-hcCCCeEEEeccccccchHhhhcccccccccCCccccCccCCCccCcccCCCChhh
Confidence 4566677777664321 122 234569999999864321 0
Q ss_pred ---CCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCCccccccccccccccCcCCC
Q 046395 409 ---ASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHIFSSLNE 472 (535)
Q Consensus 409 ---~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~~~W~~~~~~~~~~l~~ 472 (535)
..++.+++|+++|+++|++.. ||+||+||.+.++ .|+.+..+-...|..
T Consensus 341 ~~~~~k~~~~~~~~aq~~~~~~~~-Gw~fWt~K~e~~~--------------~W~~~~~~~~g~~p~ 392 (408)
T 1h4p_A 341 WSDERKENTRRYVEAQLDAFEMRG-GWIIWCYKTESSL--------------EWDAQRLMFNGLFPQ 392 (408)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTTT-EEEESCSCCSSCS--------------TTCHHHHHHTTSSCS
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcC-CeEEEeEecCCCC--------------CCCHHHHHHCCCCCC
Confidence 023468899999999998665 9999999998532 577766555555544
|
| >3qho_A Endoglucanase, 458AA long hypothetical endo-1,4-beta-glucanase; cellulase, catalytic domain, hydrolase; HET: CTT; 1.65A {Pyrococcus horikoshii} PDB: 3axx_A* 2zum_A 2zun_A* 3qhm_A* 3qhn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-36 Score=323.74 Aligned_cols=325 Identities=14% Similarity=0.203 Sum_probs=222.1
Q ss_pred ecCCceEEEecccEEe---cCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHH
Q 046395 114 ASNGYFLQAKSEMQVT---ADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMS 190 (535)
Q Consensus 114 ~~nG~flq~~~~~~v~---a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik 190 (535)
.+...||++++++|+. +++. ..|-.+.+ + |.+|.+......++.|...+ +++++.||
T Consensus 35 ~~~~~~l~v~G~~iv~~~~~~G~-------~~~v~l~G--V----------N~~G~e~~~~~~~Gl~~~~~-~~~i~~ik 94 (458)
T 3qho_A 35 TPTGIYYEVRGDTIYMINVTSGE-------ETPIHLFG--V----------NWFGFETPNHVVHGLWKRNW-EDMLLQIK 94 (458)
T ss_dssp CSSSEEEEEETTEEEEEETTTCC-------EEECCCEE--E----------ECCCTTSTTCSCTTTTTSCH-HHHHHHHH
T ss_pred CCCCCeEEEECCEEEEecCCCCC-------cceEEEEE--E----------ecCcccccccccCCCCCCCH-HHHHHHHH
Confidence 3457899999999998 3441 13333333 2 33333332223334554432 79999999
Q ss_pred HcCCCEEEeCCccccccCCC-CC------CC--CccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 191 QNGLNAVRIPVGWWIAYDPK-PP------KP--FVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 191 ~~G~N~VRipv~~w~~~~p~-~~------~~--~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
++|+|+|||||.|+.+.... ++ .| +.+..++.||++|++|.++||+||||+|+.++++. ..
T Consensus 95 ~~G~N~VRipi~~~~l~~~~~p~~~~~~~np~~~~~~~l~~ld~vV~~a~~~Gi~VIldlH~~~~~~~----------~~ 164 (458)
T 3qho_A 95 SLGFNAIRLPFCTESVKPGTQPIGIDYSKNPDLRGLDSLQIMEKIIKKAGDLGIFVLLDYHRIGCTHI----------EP 164 (458)
T ss_dssp HTTCCEEEEEEETGGGSTTCCCCCCCTTTCGGGTTCCHHHHHHHHHHHHHHTTCEEEEEEEESSSSSC----------CS
T ss_pred HcCCCEEEEeeeHHHhCCCCCccccccccCccccchHHHHHHHHHHHHHHHCCCEEEEecccCCCccC----------CC
Confidence 99999999999997643211 11 11 13458999999999999999999999999875421 23
Q ss_pred CCC--hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC-----------------CChHHHHHHHHHHHHHHHhcC
Q 046395 262 EWS--DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD-----------------LKLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 262 ~W~--~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~-----------------~~~~~~~~~~~~~~~aIR~~~ 322 (535)
.|. ....++++++|++||+||+++|+|++|||+|||+... .+...|+.++++++++||+++
T Consensus 165 ~W~~~~~~~~~~~~~w~~lA~ryk~~p~Vi~~eL~NEP~~~~~~~~~~~~~~~~~W~~~~~~~~w~~~~~~ai~aIRa~d 244 (458)
T 3qho_A 165 LWYTEDFSEEDFINTWIEVAKRFGKYWNVIGADLKNEPHSVTSPPAAYTDGTGATWGMGNPATDWNLAAERIGKAILKVA 244 (458)
T ss_dssp SSCBTTBCHHHHHHHHHHHHHHHTTSTTEEEEECSSCCCCSSCTTGGGTSSSSCBSSSSCTTTBHHHHHHHHHHHHHHHC
T ss_pred ccCCchhhHHHHHHHHHHHHHHhCCCCCEEEEEccCCCCcccccccccccccccccCCCCcHHHHHHHHHHHHHHHHHhC
Confidence 454 2368999999999999999999999999999999621 234579999999999999999
Q ss_pred CCcEEEEcC-CCCC-----------------ChhhhhcccC--CCCcEEEEEeecCcCCC---cccCC-ChhhhHHHHHH
Q 046395 323 SSAYVILSN-RLGG-----------------EWSELLSFAS--NLSRVVIDVHFYNLFWD---NFNKM-SVQQNIDYIYR 378 (535)
Q Consensus 323 p~~~ii~~~-~~g~-----------------~~~~~~~~~~--~~~n~v~d~H~Y~~~~~---~~~~~-~~~~~i~~i~~ 378 (535)
|+++|++++ .|.+ ++..+.+.+. +.+|+||++|.|.+... .|... +....+. .
T Consensus 245 p~~lIiv~G~~w~~~~~~~~~~~~~~~wwg~~l~~v~~~Pi~l~~~nlvYs~H~Y~~~~~~~~~~~~~~~~~~~~~---~ 321 (458)
T 3qho_A 245 PHWLIFVEGTQFTNPKTDSSYKWGYNAWWGGNLMAVKDYPVNLPRNKLVYSPHVFGPDVYNQPYFGPAKGFPDNLP---D 321 (458)
T ss_dssp TTCEEEECCBSCCCHHHHHTSTTTTCCCTTCBCGGGTTSCCCSCTTTEEECCBCCCTTTCCCGGGSGGGTTTTTHH---H
T ss_pred CCCEEEEcCCcccCccccccccccccCcCCCCchhhhcCCCcCCCCCEEEEEEECCCCCCCCccccCccchHHHHH---H
Confidence 999999976 3422 4455554432 35899999999987531 12111 1112222 2
Q ss_pred hhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCc-ceEEEeeeeCCCCCCceeccCCCcccc
Q 046395 379 QRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATF-GWAYWAYKFAESPQKALTLSSSTLSSL 457 (535)
Q Consensus 379 ~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~-Gw~~W~~k~~~~~~~~~~l~~~~~~~~ 457 (535)
.+...+..+.+.++.|+||||||......+.. ...+|++..++.+.++++ +|+||||+++++++++++..+|.
T Consensus 322 ~w~~~~g~l~~~~~~Pl~igEfG~~~~~g~~~--~~~~w~~~~~~yl~~~~i~~w~~W~~np~s~dt~Gll~~dW~---- 395 (458)
T 3qho_A 322 IWYHHFGYVKLELGYSVVIGEFGGKYGHGGDP--RDVIWQNKLVDWMIENKFCDFFYWSWNPDSGDTGGILQDDWT---- 395 (458)
T ss_dssp HHHHHTTHHHHTTCCCBCBCBCCCCTTSSSCT--HHHHHHHHHHHHHHHTTCCCEEESCSSSCCTTTCCSBCTTSS----
T ss_pred HHHhhhhhHhhcCCCcEEEEecCCCcCCCCCc--chHHHHHHHHHHHHhcCCCCEEEEecCCCCCCCCcccccccC----
Confidence 22233444444556679999999875322222 235788888999999986 89999999988888888888887
Q ss_pred cccc-ccccccCcCCCCCCCC
Q 046395 458 HWQT-QVTHIFSSLNEPNDTD 477 (535)
Q Consensus 458 ~W~~-~~~~~~~~l~~~n~~~ 477 (535)
.|+. .-.++++.|..++...
T Consensus 396 t~~~~k~~~l~~~~~~~~~~~ 416 (458)
T 3qho_A 396 TIWEDKYNNLKRLMDSCSKSS 416 (458)
T ss_dssp SBCHHHHHHHGGGGC------
T ss_pred CcChHHHHHHHHHhccccccc
Confidence 4654 3466777776666553
|
| >3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=297.19 Aligned_cols=250 Identities=15% Similarity=0.244 Sum_probs=187.7
Q ss_pred hhhC-ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCC
Q 046395 175 DHWK-SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPH 253 (535)
Q Consensus 175 ~hw~-~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~ 253 (535)
..|. .++|++||+.||++|+|+|||||.|+.+..+.++.+++++.+++||++|++|.++||+||||+|+.++...
T Consensus 36 ~~W~~p~~t~~di~~i~~~G~n~vRipi~w~~~~~~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vildlH~~~~w~~---- 111 (345)
T 3ndz_A 36 TNWGNPMTTHAMINKIKEAGFNTLRLPVTWDGHMGAAPEYTIDQTWMKRVEEIANYAFDNDMYVIINLHHENEWLK---- 111 (345)
T ss_dssp TTTSCCCCCHHHHHHHHHHTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCSCTTTCC----
T ss_pred CCCCCCCCcHHHHHHHHHCCCCEEEEeeehHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEecCCcccccc----
Confidence 4574 57899999999999999999999998766655455688889999999999999999999999999864211
Q ss_pred CCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----------ChHHHHHHHHHHHHHHHhc-
Q 046395 254 SGSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----------KLDSLKTYYKAGYDTVRKY- 321 (535)
Q Consensus 254 sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----------~~~~~~~~~~~~~~aIR~~- 321 (535)
...|. +...++++++|++||+||++++.+++|||+|||+.... ....+++|+++++++||++
T Consensus 112 ------~~~~~~~~~~~~~~~~w~~iA~~y~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~~~~~i~aIR~~g 185 (345)
T 3ndz_A 112 ------PFYANEAQVKAQLTKVWTQIANNFKKYGDHLIFETMNEPRPVGASLQWTGGSYENREVVNRYNLTAVNAIRATG 185 (345)
T ss_dssp ------CSTTTHHHHHHHHHHHHHHHHHHTTTCCTTEEEESCSCCCCCSGGGTTSCCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ------ccccchHHHHHHHHHHHHHHHHHHcCCCCceEEEeccCCCCCCcccccCCCCchhHHHHHHHHHHHHHHHHhcC
Confidence 12333 67889999999999999999988889999999996421 1357889999999999999
Q ss_pred --CCCcEEEEcC-CCCCChhhhhccc--CCCCcEEEEEeecCcCCCcccC-------CChhhhHHHHHHhhhHHHHHHhh
Q 046395 322 --SSSAYVILSN-RLGGEWSELLSFA--SNLSRVVIDVHFYNLFWDNFNK-------MSVQQNIDYIYRQRSSDLRNVTT 389 (535)
Q Consensus 322 --~p~~~ii~~~-~~g~~~~~~~~~~--~~~~n~v~d~H~Y~~~~~~~~~-------~~~~~~i~~i~~~~~~~l~~~~~ 389 (535)
+|+++|++++ .|+++...+..+. ..++|++|++|+|.|+. |++ ...+...+.+...... +..+.+
T Consensus 186 ~~np~~~Iiv~g~~~~~~~~~~~~~~~P~~~~n~v~s~H~Y~p~~--f~~~~~g~~~w~~~~~~~~~~~~~~~-~~~~~~ 262 (345)
T 3ndz_A 186 GNNATRYIMVPTLAASAMSTTINDLVIPNNDSKVIVSLHMYSPYF--FAMDINGTSSWGSDYDKSSLDSEFDA-VYNKFV 262 (345)
T ss_dssp GGGGTSCEEEECGGGCCSHHHHHHCCCGGGCTTEEEEEECCCSHH--HHTCTTSCSCCCSHHHHHHHHHHHHH-HHHHTG
T ss_pred CCCCCcEEEECCCccCcccchhhcccCCCCCCcEEEEEEecCchh--cccCCCCCcCCCCcccHHHHHHHHHH-HHHHHH
Confidence 6778999876 3544433333332 23789999999999853 211 1122223344433332 333334
Q ss_pred cCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 390 SDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 390 ~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
.++.|++|||||+... ...+...+|++.+++.+++.++||++|++...
T Consensus 263 ~~g~pv~iGEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~g~~ 310 (345)
T 3ndz_A 263 KNGRAVVIGEMGSINK---NNTAARVTHAEYYAKSAKARGLTPIWWDNGYS 310 (345)
T ss_dssp GGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHTTTCEEEEEECSCC
T ss_pred HcCCcEEEEeecCCCC---CCHHHHHHHHHHHHHHHHHCCCeEEEECCCCC
Confidence 4566799999998653 23455578899999999999999999999753
|
| >1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-35 Score=301.82 Aligned_cols=296 Identities=16% Similarity=0.257 Sum_probs=197.7
Q ss_pred ceEEEecccEEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEE
Q 046395 118 YFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAV 197 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~V 197 (535)
.||+++++.+++.++ +|-.+.+. + .+|.+......+..|... .++||+.||++|+|+|
T Consensus 4 ~~l~v~G~~~~d~~G---------~~~~l~Gv--N----------~~g~~~~~~~~~g~~~~~-~~~~~~~~~~~G~n~v 61 (358)
T 1ece_A 4 GYWHTSGREILDANN---------VPVRIAGI--N----------WFGFETCNYVVHGLWSRD-YRSMLDQIKSLGYNTI 61 (358)
T ss_dssp SCCEEETTEEECTTS---------CEECCEEE--E----------CCCBTTTTCSCTTTTTSC-HHHHHHHHHHTTCCEE
T ss_pred CCEEEcCCEEEcCCC---------CEEEEEEE--e----------cCCcCccccCccchhhch-HHHHHHHHHHcCCCEE
Confidence 578999998887554 33344432 2 122211111223444332 3899999999999999
Q ss_pred EeCCccccccCCCCCCCCcc----------chHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC--h
Q 046395 198 RIPVGWWIAYDPKPPKPFVG----------GSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS--D 265 (535)
Q Consensus 198 Ripv~~w~~~~p~~~~~~~~----------~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~--~ 265 (535)
|||+.|+.+.....+..++. ..++.||++|++|.++||+||||+|+ |+++++ ...|. +
T Consensus 62 Ri~~~~~~~~~~~~~~~~~~~~~np~~~g~~~~~~ld~~v~~a~~~Gi~vild~h~-~~~~~~---------~~~w~~~~ 131 (358)
T 1ece_A 62 RLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHR-PDCSGQ---------SALWYTSS 131 (358)
T ss_dssp EEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEE-SBTTBC---------CSSSCCSS
T ss_pred EeeccHHHhcCCCCCccccccccCccccCccHHHHHHHHHHHHHHCCCEEEEecCC-CCCCCC---------CCCCcCCC
Confidence 99999865432111122332 28999999999999999999999998 665432 12342 4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC-----CChHHHHHHHHHHHHHHHhcCCCcEEEEcCC--------
Q 046395 266 SDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD-----LKLDSLKTYYKAGYDTVRKYSSSAYVILSNR-------- 332 (535)
Q Consensus 266 ~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-------- 332 (535)
...+++.++|+.|++||+++|+|++|||+|||.... .....|..++++++++||+++|+++|++++.
T Consensus 132 ~~~~~~~~~~~~ia~r~~~~p~v~~~el~NEP~~~~~w~~~~~~~~~~~~~~~~~~~Ir~~dp~~~v~v~g~~~~~~~~~ 211 (358)
T 1ece_A 132 VSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSY 211 (358)
T ss_dssp SCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEEC
T ss_pred ccHHHHHHHHHHHHHHhcCCCcEEEEEcccCCCCcccCCCCCCHHHHHHHHHHHHHHHHhhCCCeEEEECCCccCCCCCC
Confidence 578999999999999999999999999999998642 2356799999999999999999999999652
Q ss_pred -CCCChhhhhccc---CCCCcEEEEEeecCcCCC--c-ccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcC
Q 046395 333 -LGGEWSELLSFA---SNLSRVVIDVHFYNLFWD--N-FNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWE 405 (535)
Q Consensus 333 -~g~~~~~~~~~~---~~~~n~v~d~H~Y~~~~~--~-~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~ 405 (535)
|+.++..+...+ ...+++||++|.|.++.. . +........+... +...+..+.+..+.|++|||||....
T Consensus 212 ~w~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~~~~w~~~~~~~~~~~~~---~~~~~~~~~~~~g~Pv~igEfG~~~~ 288 (358)
T 1ece_A 212 WWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGI---WNKNWGYLFNQNIAPVWLGEFGTTLQ 288 (358)
T ss_dssp STTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHH---HHHHTHHHHHTTSSCEEEEECCCCCC
T ss_pred ccCCcCCcCccCCCcCCCCCceEEeeeecCCCcCCcccccCcchhhHHHHH---HHHHHHHHHhcCCCCEEEeccCCCCC
Confidence 433333322221 125789999999988641 1 1111122222221 11122233345566799999998653
Q ss_pred CCCCCHHHHHHHHHHHHHHHhh------CCcceEEEeeeeCCCCCCceeccCCC
Q 046395 406 AEGASKRDYQRFAEAQLDVYGR------ATFGWAYWAYKFAESPQKALTLSSST 453 (535)
Q Consensus 406 ~~~~~~~~~~~~~~~ql~~~~~------~~~Gw~~W~~k~~~~~~~~~~l~~~~ 453 (535)
. . ...+|++..++.+++ .++||+||+|+++.+...+++..+|.
T Consensus 289 ~----~-~~~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~~~d~~Gl~~~dw~ 337 (358)
T 1ece_A 289 S----T-TDQTWLKTLVQYLRPTAQYGADSFQWTFWSWNPDSGDTGGILKDDWQ 337 (358)
T ss_dssp S----H-HHHHHHHHHHHHTCCHHHHTTSSCEEEESCSCSCCTTTCCSBCTTSS
T ss_pred C----C-ccHHHHHHHHHHHHHhhhcccCCceeeEEcccCCCCCCCceeccccC
Confidence 1 1 124566666666666 89999999999876665555555544
|
| >1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=299.07 Aligned_cols=252 Identities=20% Similarity=0.363 Sum_probs=186.4
Q ss_pred hhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC
Q 046395 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS 254 (535)
Q Consensus 175 ~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s 254 (535)
.||.++++++||+.||++|+|+|||||.|+.+.....+..++++.++.||++|++|.++||+||||+|+.||++.. ..
T Consensus 23 ~~~~~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~~g~~~~~~~~~l~~~v~~a~~~Gi~vildlh~~~g~~~~--~~ 100 (343)
T 1ceo_A 23 EHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQ--DF 100 (343)
T ss_dssp HHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC--------
T ss_pred hhhhcccCHHHHHHHHHcCCCEEEecCCHHHhccccCCCcccHHHHHHHHHHHHHHHHCCCEEEEEecCCCccccC--CC
Confidence 5899999999999999999999999999876543322234788899999999999999999999999999876522 11
Q ss_pred CCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-
Q 046395 255 GSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR- 332 (535)
Q Consensus 255 g~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~- 332 (535)
+ ....|. +...+++.++|+.||+||+++|.|++|||+|||... ....|..++++++++||+++|+++|++++.
T Consensus 101 ~---~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~--~~~~~~~~~~~~~~~IR~~~p~~~i~v~~~~ 175 (343)
T 1ceo_A 101 K---TSTLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIGGNN 175 (343)
T ss_dssp -----CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEECHH
T ss_pred C---cccCcCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCc--chHHHHHHHHHHHHHHHhhCCCCEEEEeCCC
Confidence 1 113454 678999999999999999999999999999999963 357899999999999999999999998762
Q ss_pred CCCChhhhhcc-cCCCCcEEEEEeecCcCCCcccCCC-----------------------------------------hh
Q 046395 333 LGGEWSELLSF-ASNLSRVVIDVHFYNLFWDNFNKMS-----------------------------------------VQ 370 (535)
Q Consensus 333 ~g~~~~~~~~~-~~~~~n~v~d~H~Y~~~~~~~~~~~-----------------------------------------~~ 370 (535)
|+. ...+..+ +..+++++|++|+|.++. |++.. ..
T Consensus 176 ~~~-~~~~~~~~~~~~~~~v~~~H~Y~~~~--ft~~~~~w~~~~~~~~~~~~yp~~~~~~~~~~~~~~c~~~~~~~~~~~ 252 (343)
T 1ceo_A 176 YNS-PDELKNLADIDDDYIVYNFHFYNPFF--FTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELNNLK 252 (343)
T ss_dssp HHC-GGGGGGSCCCCCSSEEEEEEECCSHH--HHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGTTCE
T ss_pred cCC-HHHHhhcCcCCCCCEEEEeeccCccc--cCcCCCCCCcccccccCCCCCCCcccchhhhhccchhhhhhhhccccc
Confidence 321 1222221 134678999999998641 11110 00
Q ss_pred hhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 371 QNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 371 ~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
+..+.+...+.. +..+.+..+.|++|||||+... ...+...+|++.+++.+++.++||++|+|+.+
T Consensus 253 ~~~~~~~~~~~~-~~~~~~~~g~Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 318 (343)
T 1ceo_A 253 LNKELLRKDLKP-AIEFREKKKCKLYCGEFGVIAI---ADLESRIKWHEDYISLLEEYDIGGAVWNYKKM 318 (343)
T ss_dssp ESHHHHHHHHHH-HHHHHHHHCCEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred cCHHHHHHHHHH-HHHHHHHhCCCEEecccccccC---CChHHHHHHHHHHHHHHHHcCCCeEEeecCCC
Confidence 111223332222 2223334456699999998653 34556788999999999999999999999874
|
| >1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-34 Score=293.61 Aligned_cols=250 Identities=20% Similarity=0.335 Sum_probs=187.2
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD 258 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~ 258 (535)
++++++||+.||++|+|+|||||.||.+..+.++..++++.++.||++|++|.++||+||||+|+.||.+. .++...
T Consensus 35 ~~~~~~d~~~i~~~G~n~vRi~i~~~~~~~~~~p~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~pg~~~---~~~~~~ 111 (341)
T 1vjz_A 35 GNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSV---NKEVEE 111 (341)
T ss_dssp CCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEES---CTTSCC
T ss_pred CCCCHHHHHHHHHcCCCEEEeeCCHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCCccc---ccCCCc
Confidence 67889999999999999999999998754432223477889999999999999999999999999887631 112112
Q ss_pred CCCCCC-hHHHHHHHHHHHHHHHHhCCC-CcEEEEEeecCCCCCCC---ChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-
Q 046395 259 GFQEWS-DSDIQETVAIIDFLASRYADH-PSLVAIELMNEPKAPDL---KLDSLKTYYKAGYDTVRKYSSSAYVILSNR- 332 (535)
Q Consensus 259 ~~~~W~-~~~~~~~~~~~~~la~ry~~~-p~V~~~el~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~- 332 (535)
....|. +...+.+.++|+.||+||+++ |.|++|||+|||..... ....++.++++++++||+++|+++|++++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~ia~ry~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~v~g~~ 191 (341)
T 1vjz_A 112 KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLG 191 (341)
T ss_dssp SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCEEEECHH
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCCCCcccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCCc
Confidence 234565 778999999999999999999 99999999999997432 347899999999999999999999999752
Q ss_pred CCCChhhhhcccCCCCcEEEEEeecCcCCCcccCC-------------------ChhhhHHHHHHhhhHHHHHHhhcCCC
Q 046395 333 LGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKM-------------------SVQQNIDYIYRQRSSDLRNVTTSDGP 393 (535)
Q Consensus 333 ~g~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~-------------------~~~~~i~~i~~~~~~~l~~~~~~~~p 393 (535)
|+. ..+.. ..++++++++|+|.++....... ......+.+...+.... .+.+ ++.
T Consensus 192 ~~~--~~~~~--l~~~n~v~s~H~Y~~~~~~~~~~~w~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~~~~~-~~~~-~g~ 265 (341)
T 1vjz_A 192 YGN--IPVDD--LTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWI-KLRQ-KGI 265 (341)
T ss_dssp HHT--BCCTT--CCCSSEEEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHHHH-GGGG-GTC
T ss_pred CCc--ccccc--cCCCCeEEEEeeccCccccccCcccccccccCCCCCCCcccccchhhHHHHHHHHHHHH-HHHH-hCC
Confidence 322 11111 23689999999998753110000 01112334444333322 3444 466
Q ss_pred cEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 394 LSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 394 ~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
|++|||||+... ...+...+|++++++++++.++||+||+|+.+
T Consensus 266 Pv~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~W~~~~~ 309 (341)
T 1vjz_A 266 EVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFRGP 309 (341)
T ss_dssp EEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBST
T ss_pred CeEEeccccccC---CChHHHHHHHHHHHHHHHHcCCceEEEecCCC
Confidence 799999998653 24566778999999999999999999999885
|
| >3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-34 Score=290.93 Aligned_cols=245 Identities=21% Similarity=0.343 Sum_probs=185.9
Q ss_pred HhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCC
Q 046395 174 RDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPH 253 (535)
Q Consensus 174 ~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~ 253 (535)
++||.++++++||+.||++|+|+|||||.|+....+.++..++++.++.+|++|++|.++||+||||+|+.++..
T Consensus 35 ~~~w~~~~~~~d~~~l~~~G~n~vRi~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vildlh~~~~~~----- 109 (320)
T 3nco_A 35 EGSWGVYIEDEYFKIIKERGFDSVRIPIRWSAHISEKYPYEIDKFFLDRVKHVVDVALKNDLVVIINCHHFEELY----- 109 (320)
T ss_dssp TTTTSCCCCHHHHHHHHHHTCCEEEECCCGGGSBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHH-----
T ss_pred CCccCCcCCHHHHHHHHHCCCCEEEEeeehHHhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEcCCCcccc-----
Confidence 479999999999999999999999999998766544444457778899999999999999999999999864310
Q ss_pred CCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCC
Q 046395 254 SGSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR 332 (535)
Q Consensus 254 sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~ 332 (535)
.. +...+.+.++|++|++||+++|+|++|+|+|||... .+...+..++++++++||+++|+++|++++.
T Consensus 110 ---------~~~~~~~~~~~~~~~~ia~~~~~~~~vv~~~l~NEP~~~-~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~ 179 (320)
T 3nco_A 110 ---------QAPDKYGPVLVEIWKQVAQAFKDYPDKLFFEIFNEPAQN-LTPTKWNELYPKVLGEIRKTNPSRIVIIDVP 179 (320)
T ss_dssp ---------HCHHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSCCCTT-SCHHHHHHHHHHHHHHHHHHCSSCCEEEECS
T ss_pred ---------cCcHHHHHHHHHHHHHHHHHHcCCCceEEEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCcEEEECCC
Confidence 01 357899999999999999999999999999999963 4568899999999999999999999999763
Q ss_pred -CCCChhhhhccc-CCCCcEEEEEeecCcCCCcccCC----------------ChhhhHHHHHHhhhHHHHHHhhcCCCc
Q 046395 333 -LGGEWSELLSFA-SNLSRVVIDVHFYNLFWDNFNKM----------------SVQQNIDYIYRQRSSDLRNVTTSDGPL 394 (535)
Q Consensus 333 -~g~~~~~~~~~~-~~~~n~v~d~H~Y~~~~~~~~~~----------------~~~~~i~~i~~~~~~~l~~~~~~~~p~ 394 (535)
|+ ....+.... ..++++++++|.|.++. |++. ..+...+.+...+.. +..+.+..+.|
T Consensus 180 ~~~-~~~~~~~~~~~~~~~~v~~~H~Y~~~~--~~~~~~~w~~~~~~~~~~w~g~~~~~~~~~~~~~~-~~~~~~~~g~P 255 (320)
T 3nco_A 180 NWS-NYSYVRELKLVDDKNIIVSFHYYEPFN--FTHQGAEWVSPTLPIGVKWEGKDWEVEQIRNHFKY-VSEWAKKNNVP 255 (320)
T ss_dssp GGG-BGGGGGGCCCCSCTTEEEEEEECCSHH--HHTTTCTTSSSCCCSCCCCCCCHHHHHHHHHHHHH-HHHHHHHHTCC
T ss_pred CcC-chhHHhcCCCCCCCCeEEEEEecCCee--eEeccccccCCCCCCCCCCCCchhhHHHHHHHHHH-HHHHHHHcCCC
Confidence 32 222222221 23689999999998753 1111 111223344333332 33333344556
Q ss_pred EEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 395 SFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 395 v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
++|||||+... ...+...+|++.+++++++.++||++|+++..
T Consensus 256 v~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~gi~~~~W~~~~~ 298 (320)
T 3nco_A 256 IFLGEFGAYSK---ADMESRVKWTKTVRRIAEEFGFSLAYWEFCAG 298 (320)
T ss_dssp EEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSGG
T ss_pred EEEeeeeeecC---CCHHHHHHHHHHHHHHHHHcCCeEEEEecCCC
Confidence 99999998653 23555667899999999999999999999653
|
| >7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=284.71 Aligned_cols=274 Identities=16% Similarity=0.247 Sum_probs=193.2
Q ss_pred ceEEEecccEEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHH-HcCCCE
Q 046395 118 YFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMS-QNGLNA 196 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik-~~G~N~ 196 (535)
+.|+++++++++.+++ |-.+.+ + +..+. .+|.++++++||+.|+ ++|+|+
T Consensus 10 g~l~v~G~~l~d~nG~---------~v~lrG--v----------n~~~~--------~~~~~~~~~~~~~~l~~~~G~N~ 60 (303)
T 7a3h_A 10 GQLSISNGELVNERGE---------QVQLKG--M----------SSHGL--------QWYGQFVNYESMKWLRDDWGINV 60 (303)
T ss_dssp CSCEEETTEEECTTSC---------BCCCEE--E----------EESCH--------HHHGGGCSHHHHHHHHHHTCCCE
T ss_pred CeEEEeCCEEECCCCC---------EEEEEE--e----------ccCcc--------ccccccCCHHHHHHHHHhcCCCE
Confidence 4678888988875543 333332 1 11222 2455678899999998 799999
Q ss_pred EEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 046395 197 VRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276 (535)
Q Consensus 197 VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~ 276 (535)
||||+.|. .++...++..++.||++|++|.++||+||||+|..++++. ....+++.++|+
T Consensus 61 VRip~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~---------------~~~~~~~~~~w~ 120 (303)
T 7a3h_A 61 FRAAMYTS-----SGGYIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP---------------NIYKEEAKDFFD 120 (303)
T ss_dssp EEEEEESS-----TTSTTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHH
T ss_pred EEEEEEeC-----CCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecccCCCCc---------------hHHHHHHHHHHH
Confidence 99999862 1222135568999999999999999999999999876421 135678999999
Q ss_pred HHHHHhCCCCcEEEEEeecCCCCCCCCh-HHHHHHHHHHHHHHHhcCCCcEEEEcCC-CCCChhhhhcccCCCCcEEEEE
Q 046395 277 FLASRYADHPSLVAIELMNEPKAPDLKL-DSLKTYYKAGYDTVRKYSSSAYVILSNR-LGGEWSELLSFASNLSRVVIDV 354 (535)
Q Consensus 277 ~la~ry~~~p~V~~~el~NEP~~~~~~~-~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g~~~~~~~~~~~~~~n~v~d~ 354 (535)
.||+||+++|+|+ |||+|||....... ..++.++++++++||+++|+++|++++. |+.++..+...+..+++++|++
T Consensus 121 ~ia~r~~~~~~Vi-~el~NEP~~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w~~~~~~~~~~p~~~~n~v~s~ 199 (303)
T 7a3h_A 121 EMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYAF 199 (303)
T ss_dssp HHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSCCSCTTEEEEE
T ss_pred HHHHHhCCCCeEE-EEeccCCCCCCcChHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCcccchhhHhhCCCCCCCEEEEE
Confidence 9999999999999 99999999743333 3789999999999999999999999763 4455555544444578999999
Q ss_pred eecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEE
Q 046395 355 HFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAY 434 (535)
Q Consensus 355 H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~ 434 (535)
|+|.... . +.+.. .+..+.+ .+.|+||||||......... .+..+++..++.++++++||++
T Consensus 200 H~Y~~~~-------~----~~~~~----~~~~~~~-~g~P~~igEfG~~~~~~~g~--~~~~~~~~~l~~~~~~~i~w~~ 261 (303)
T 7a3h_A 200 HFYAGTH-------G----QNLRD----QVDYALD-QGAAIFVSEWGTSAATGDGG--VFLDEAQVWIDFMDERNLSWAN 261 (303)
T ss_dssp EEETTSC-------C----HHHHH----HHHHHHH-TTCCEEEEEEESSCTTSCSC--CCHHHHHHHHHHHHHTTCCEEE
T ss_pred EecCCCc-------h----HHHHH----HHHHHHH-cCCCEEEECCCCCCCCCCCc--ccHHHHHHHHHHHHhcCCceEE
Confidence 9997421 1 11221 1222333 34569999999864321111 1234556667888889999999
Q ss_pred EeeeeCCCCCCceeccCCCcccccccc
Q 046395 435 WAYKFAESPQKALTLSSSTLSSLHWQT 461 (535)
Q Consensus 435 W~~k~~~~~~~~~~l~~~~~~~~~W~~ 461 (535)
|+|+..... ..++.++......|+.
T Consensus 262 W~~~~~~~~--~~~l~~~~~~~~~~~~ 286 (303)
T 7a3h_A 262 WSLTHKDES--SAALMPGANPTGGWTE 286 (303)
T ss_dssp EEESCCSST--TCSBCTTCCTTCCCCG
T ss_pred EEecCCCCc--cceecCCCCCCCCCCh
Confidence 999986433 2345555544455654
|
| >3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-33 Score=286.70 Aligned_cols=258 Identities=17% Similarity=0.236 Sum_probs=183.1
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
|++.+++||++|+|+|||||.|+.+.....+.+++++.+++||++|++|.++||+||||+|+.++ .++... +.
T Consensus 45 t~~m~~~i~~~G~N~vRipi~w~~~~~~~~~g~~~~~~l~~ld~vV~~a~~~Gi~vIlDlH~~~~-~~g~~~-----~~- 117 (340)
T 3qr3_A 45 IGQMQHFVNEDGMTIFRLPVGWQYLVNNNLGGNLDSTSISKYDQLVQGCLSLGAYCIVDIHNYAR-WNGGII-----GQ- 117 (340)
T ss_dssp HHHHHHHHHHHCCCEEEEEECHHHHTTTCTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEECSTTE-ETTEET-----TT-
T ss_pred HHHHHHHHHHCCCCEEEEEeeHHHhCCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCcc-cCCccc-----CC-
Confidence 56778899999999999999986554323445588889999999999999999999999999875 222110 10
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC-cEEEEcC-CCCCChh-
Q 046395 262 EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSS-AYVILSN-RLGGEWS- 338 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~ii~~~-~~g~~~~- 338 (535)
.+...++++++|++||+||+++|.|+ |||+|||... +...|+.++++++++||+.+|+ ++|++++ .|++++.
T Consensus 118 --~~~~~~~~~~~w~~iA~ryk~~~~Vi-~el~NEP~~~--~~~~w~~~~~~~i~aIR~~~~~~~~Iiv~g~~w~~~~~w 192 (340)
T 3qr3_A 118 --GGPTNAQFTSLWSQLASKYASQSRVW-FGIMNEPHDV--NINTWAATVQEVVTAIRNAGATSQFISLPGNDWQSAGAF 192 (340)
T ss_dssp --TSSCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECSGGGBTTTT
T ss_pred --CHHHHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCC--CHHHHHHHHHHHHHHHHhhCCCccEEEEeCCcccccccc
Confidence 12478999999999999999999997 9999999963 6789999999999999999999 7888875 3542211
Q ss_pred -------hhhcccCC---CCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCC
Q 046395 339 -------ELLSFASN---LSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEG 408 (535)
Q Consensus 339 -------~~~~~~~~---~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~ 408 (535)
.+..+..+ ++|+||++|+|.+++ |++.+.++....+.. +...+..+.+.++.|+||||||...
T Consensus 193 ~~~~~~~~l~~l~dP~~~~~nlvys~H~Y~~~~--~sgt~~~~~~~~i~~-~~~~~~~~~~~~g~pv~iGEfG~~~---- 265 (340)
T 3qr3_A 193 ISDGSAAALSQVTNPDGSTTNLIFDVHKYLDSD--NSGTHAECTTNNIDG-AFSPLATWLRQNNRQAILTETGGGN---- 265 (340)
T ss_dssp TTTSHHHHHTTCCCTTSCCTTEEEEEECCCSTT--SSSCSSSCCCCSTTT-THHHHHHHHHHTTCCEEEEEECCCS----
T ss_pred cccccchhhcccCCCCCCCCCEEEEEEeCCCCC--CCCCCcccchhhHHH-HHHHHHHHHHHcCCcEEEeCccCCC----
Confidence 12222222 489999999999875 332222211111111 1112233334566679999999742
Q ss_pred CCHHHHHHHHHHHHHHHhhCC---cceEEEeeeeCCCCCCceeccCCCc-ccccccccc
Q 046395 409 ASKRDYQRFAEAQLDVYGRAT---FGWAYWAYKFAESPQKALTLSSSTL-SSLHWQTQV 463 (535)
Q Consensus 409 ~~~~~~~~~~~~ql~~~~~~~---~Gw~~W~~k~~~~~~~~~~l~~~~~-~~~~W~~~~ 463 (535)
.....++++.+++++++++ +||++|+..+-+++ +.+.+... +...|+.+.
T Consensus 266 --~~~~~~~~~~~l~~~~~~~~~~~gw~~W~~G~~~~~---y~~~~~p~~~~~~~~~~~ 319 (340)
T 3qr3_A 266 --VQSCIQDMCQQIQYLNQNSDVYLGYVGWGAGSFDST---YVLTETPTSSGNSWTDTS 319 (340)
T ss_dssp --SHHHHHHHHHHHHHHHTTTTTEEEEEEEEEETCCTT---STTCCCCEESSSCEECCH
T ss_pred --ChHHHHHHHHHHHHHHHcCCcceEEEEecCCCCCCC---cccccCCCCCCCccchHH
Confidence 2456788999999999988 78888887776553 23332222 245687764
|
| >3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=281.20 Aligned_cols=284 Identities=17% Similarity=0.252 Sum_probs=198.7
Q ss_pred CceEEEecccEEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHH-HHcCCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFM-SQNGLN 195 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~i-k~~G~N 195 (535)
-++|+++++++++.+++ |-.+.+ ++ ..+. .+|..+++++||+.| |++|+|
T Consensus 34 ~g~l~v~G~~l~d~nG~---------~v~l~G--vn----------~h~~--------~~~~~~~~~~~~~~l~~~~G~N 84 (327)
T 3pzt_A 34 NGQLSIKGTQLVNRDGK---------AVQLKG--IS----------SHGL--------QWYGEYVNKDSLKWLRDDWGIT 84 (327)
T ss_dssp CCSCEEETTEEECTTSC---------BCCCEE--EE----------ESCH--------HHHGGGCSHHHHHHHHHHTCCS
T ss_pred CCcEEEeCCEEECCCCC---------EEEEEE--Ec----------CCch--------hhcCCCCCHHHHHHHHHhcCCC
Confidence 35778888888875543 333332 11 1121 234557889999999 689999
Q ss_pred EEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAII 275 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~ 275 (535)
+||+|+.+. .++...++..++.||++|++|.++||+||||+|..++++. ..+.+++.++|
T Consensus 85 ~VRi~~~~~-----~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~H~~~~~~~---------------~~~~~~~~~~w 144 (327)
T 3pzt_A 85 VFRAAMYTA-----DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDWHILNDGNP---------------NQNKEKAKEFF 144 (327)
T ss_dssp EEEEEEESS-----TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHH
T ss_pred EEEEEeEEC-----CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc---------------hHHHHHHHHHH
Confidence 999999641 1222235678999999999999999999999998875421 13568899999
Q ss_pred HHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-CCCChhhhhcccCCCCcEEEEE
Q 046395 276 DFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR-LGGEWSELLSFASNLSRVVIDV 354 (535)
Q Consensus 276 ~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g~~~~~~~~~~~~~~n~v~d~ 354 (535)
+.|++||+++|+|+ |+|+|||.....-...++.|+++++++||+++|+++|++++. |+.++..+...+...++++|++
T Consensus 145 ~~~a~r~k~~p~Vi-~el~NEp~~~~~w~~~~~~~~~~~~~~IR~~dp~~~I~v~~~~w~~~~~~~~~~~~~~~n~v~s~ 223 (327)
T 3pzt_A 145 KEMSSLYGNTPNVI-YEIANEPNGDVNWKRDIKPYAEEVISVIRKNDPDNIIIVGTGTWSQDVNDAADDQLKDANVMYAL 223 (327)
T ss_dssp HHHHHHHTTCTTEE-EECCSCCCSSCCTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTCHHHHHTSCCCCTTEEEEE
T ss_pred HHHHHHhCCCCcEE-EEeccCCCCCcccHHHHHHHHHHHHHHHHhhCCCCEEEEeCCcccccchhhhhCCCCCCCeEEEE
Confidence 99999999999999 999999986322234789999999999999999999999763 5455555544444568999999
Q ss_pred eecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEE
Q 046395 355 HFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAY 434 (535)
Q Consensus 355 H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~ 434 (535)
|.|.... . +.+... +..+. ..+.|+||||||........ ..+..+++..++.++++++||++
T Consensus 224 H~Y~~~~-------~----~~~~~~----~~~~~-~~g~Pv~igEfG~~~~~g~g--~~~~~~~~~~l~~~~~~~i~w~~ 285 (327)
T 3pzt_A 224 HFYAGTH-------G----QFLRDK----ANYAL-SKGAPIFVTEWGTSDASGNG--GVFLDQSREWLKYLDSKTISWVN 285 (327)
T ss_dssp EEETTTC-------C----HHHHHH----HHHHH-HTTCCEEEEEEESSCTTSCS--CCCHHHHHHHHHHHHHTTCCEEE
T ss_pred EecCCCc-------h----HHHHHH----HHHHH-HcCCcEEEEccCCCCCCCCC--cccHHHHHHHHHHHHHcCCeeEE
Confidence 9996521 1 122211 22222 33456999999976432111 11234566777888889999999
Q ss_pred EeeeeCCCCCCceeccCCCcccccccc-----ccccccCcC
Q 046395 435 WAYKFAESPQKALTLSSSTLSSLHWQT-----QVTHIFSSL 470 (535)
Q Consensus 435 W~~k~~~~~~~~~~l~~~~~~~~~W~~-----~~~~~~~~l 470 (535)
|+|+..... ..+|.++++...+|+. .++++|+.|
T Consensus 286 W~~~d~~e~--~~~l~~~~~~~~~~~~~~l~~~g~~~~~~~ 324 (327)
T 3pzt_A 286 WNLSDKQES--SSALKPGASKTGGWRLSDLSASGTFVRENI 324 (327)
T ss_dssp EEESCCSST--TCSBCTTCCTTCCCCGGGBCHHHHHHHHHH
T ss_pred EEecCCCCc--ceeecCCCCCCCCCChHhcCHHHHHHHHHH
Confidence 999986543 3456666555556664 345555444
|
| >3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-32 Score=283.62 Aligned_cols=265 Identities=18% Similarity=0.222 Sum_probs=186.8
Q ss_pred hccChhhhhHhHHhhhC-ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe
Q 046395 162 NGYGPDKAAKLMRDHWK-SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD 240 (535)
Q Consensus 162 ~~~G~~~a~~~~~~hw~-~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld 240 (535)
+++|.+..+...+.||. .+++++||+.||++|+|+|||||.|.....+.++..++++.++.||++|++|.++||+||||
T Consensus 43 ~w~~~~~~~~~~e~~W~~~~~~~~di~~i~~~G~N~vRipi~w~~~~~~~~~~~~~~~~l~~~~~vv~~a~~~Gi~vild 122 (376)
T 3ayr_A 43 EYLNYEKDQTASETCWGNPKTTEDMFKVLIDNQFNVFRIPTTWSGHFGEAPDYKIDEKWLKRVHEVVDYPYKNGAFVILN 122 (376)
T ss_dssp TTSCGGGCTTGGGGTTSCCCCCHHHHHHHHHTTCCEEEECCCCTTSBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred ccccccCCCCCCCCccCCCcCcHHHHHHHHHcCCCEEEEeeEChhhcCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 45565556667789996 58999999999999999999999986554433444477889999999999999999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----------ChHHHHHH
Q 046395 241 LHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----------KLDSLKTY 310 (535)
Q Consensus 241 lH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----------~~~~~~~~ 310 (535)
+|+.+.... .+ +. .+...+.+.++|++||+||+++|.+++|+|+|||..... ....++.|
T Consensus 123 lH~~~~~~~----~~---~~---~~~~~~~~~~~w~~ia~~~~~~~~~v~~el~NEP~~~~~~~~W~~~~~~~~~~l~~~ 192 (376)
T 3ayr_A 123 LHHETWNHA----FS---ET---LDTAKEILEKIWSQIAEEFKDYDEHLIFEGLNEPRKNDTPVEWTGGDQEGWDAVNAM 192 (376)
T ss_dssp CCSCSSCCS----CT---TT---HHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSCCCCTTSTTTTTTCCHHHHHHHHHH
T ss_pred CCCcccccc----cc---cc---hHHHHHHHHHHHHHHHHHHcCCCceeeEEeecCCCcCCCccccCCccHHHHHHHHHH
Confidence 998642110 00 10 146788999999999999999999899999999997421 12357889
Q ss_pred HHHHHHHHHhcCC---CcEEEEcCC-CCCChhhhhcc--cCCCCcEEEEEeecCcCCCcccCC--------ChhhhHHHH
Q 046395 311 YKAGYDTVRKYSS---SAYVILSNR-LGGEWSELLSF--ASNLSRVVIDVHFYNLFWDNFNKM--------SVQQNIDYI 376 (535)
Q Consensus 311 ~~~~~~aIR~~~p---~~~ii~~~~-~g~~~~~~~~~--~~~~~n~v~d~H~Y~~~~~~~~~~--------~~~~~i~~i 376 (535)
+++++++||++++ +++|++++. ++.+...+..+ +..++++||++|+|.++. |++. ..+.....+
T Consensus 193 ~~~~~~aIR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~~~~n~v~s~H~Y~~~~--~~~~~~~~~~~~~~~~~~~~~ 270 (376)
T 3ayr_A 193 NAVFLKTVRSAGGNNPKRHLMIPPYAAACNENSFNNFIFPEDDDKVIASVHAYAPYN--FALNNGEGAVDKFDAAGKRDL 270 (376)
T ss_dssp HHHHHHHHHTSSTTGGGCCEEECCGGGBCSHHHHHTCCCCTTCTTEEEEEECCCSHH--HHTCCSTTCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCcEEEECCCccCccccccccccCCCCCCCEEEEEeecCchh--ccccCCCCcccccChhhhhHH
Confidence 9999999999954 468888752 21222233222 233589999999998853 1111 111112222
Q ss_pred HHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCC
Q 046395 377 YRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAES 442 (535)
Q Consensus 377 ~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~ 442 (535)
...+.. +.......+.|++|||||+.... +.+...+|++.+++.+.+.++||++|++..-++
T Consensus 271 ~~~~~~-~~~~~~~~g~Pv~igEfG~~~~~---~~~~~~~w~~~~~~~~~~~~ig~~~W~~g~~~g 332 (376)
T 3ayr_A 271 EWNINL-MKKRFVDQGIPMILGEYGAMNRD---NEEDRATWAEFYMEKVTAMGVPQIWWDNGVFEG 332 (376)
T ss_dssp HHHHHH-HHHHTGGGTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHHTTTCCEEEEECSCCSS
T ss_pred HHHHHH-HHHHHHHcCCcEEEEccccCCCC---CcHHHHHHHHHHHHHHHHCCCcEEEECCCCCCC
Confidence 222211 22222334556999999987542 345567788888999999999999999865443
|
| >1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-32 Score=279.72 Aligned_cols=240 Identities=17% Similarity=0.178 Sum_probs=175.6
Q ss_pred hhhCccchHHHHHHHHHcCCCEEEeCCccccccCC-CCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCC
Q 046395 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDP-KPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPH 253 (535)
Q Consensus 175 ~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p-~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~ 253 (535)
.+| ++++++||+.||++|+|+|||||.|. .+.| .++.+++++.++.||++|++|.++||+||||+|+.++- +
T Consensus 27 ~~~-~~~~~~di~~~~~~G~n~vRi~i~w~-~~~~~~~~~~~~~~~l~~~~~~v~~~~~~gi~vild~h~~~~~-~---- 99 (305)
T 1h1n_A 27 KDY-IWPDPNTIDTLISKGMNIFRVPFMME-RLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRY-Y---- 99 (305)
T ss_dssp TTB-CCCCHHHHHHHHHTTCCEEEEEECHH-HHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEE-T----
T ss_pred ccC-CCCCHHHHHHHHHCCCCEEEecccHH-HcCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEeccccccc-c----
Confidence 445 57889999999999999999999974 4555 44455888999999999999999999999999987531 1
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCC-CcEEEEcC-
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSS-SAYVILSN- 331 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p-~~~ii~~~- 331 (535)
|... ...++++++|++||+||+++|.| +|+|+|||... +...|+.++++++++||+.++ +++|++++
T Consensus 100 -g~~~-------~~~~~~~~~~~~ia~~~~~~~~V-~~~l~NEP~~~--~~~~w~~~~~~~~~~IR~~~~~~~~I~v~g~ 168 (305)
T 1h1n_A 100 -NSII-------SSPSDFETFWKTVASQFASNPLV-IFDTDNEYHDM--DQTLVLNLNQAAIDGIRSAGATSQYIFVEGN 168 (305)
T ss_dssp -TEEC-------CCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCCSS--CHHHHHHHHHHHHHHHHHTTCCSSCEEEECT
T ss_pred -CCcC-------CcHHHHHHHHHHHHHHhCCCCeE-EEeccCCCCCC--CHHHHHHHHHHHHHHHHhcCCCccEEEEccc
Confidence 1000 23789999999999999999999 89999999963 678999999999999999998 99988865
Q ss_pred CCCCC--hh----hhhcccCCCCcEEEEEeecCcCCCcccCCChhhh-HHHHHHhhhHHHHHHhhcCCCcEEEeccCCCc
Q 046395 332 RLGGE--WS----ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQN-IDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEW 404 (535)
Q Consensus 332 ~~g~~--~~----~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~-i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~ 404 (535)
.|+.+ +. .+..+..+.++++|++|+|.+++. ........ ...+...... +..+.+.++.|++|||||+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~p~~~~v~s~H~Y~~~~~--~g~~~~~~~~~~~~~~~~~-~~~~~~~~g~Pv~igEfG~~~ 245 (305)
T 1h1n_A 169 SWTGAWTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDG--SGTSATCVSSTIGQERITS-ATQWLRANGKKGIIGEFAGGA 245 (305)
T ss_dssp GGGBSTTHHHHSGGGGGCCCTTCCEEEEEEEECSTTS--SSCCSCCSCTTHHHHHHHH-HHHHHHHTTCCEEEEEEECCS
T ss_pred cccCcccccccCcccccCcCCCCCEEEEEEEcCCCCC--cCCCCCccCcchHHHHHHH-HHHHHHHcCCcEEEEeccCCC
Confidence 45322 21 122222335799999999987642 11111000 0001111111 122223445669999999764
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhCC---cceEEEeeeeCC
Q 046395 405 EAEGASKRDYQRFAEAQLDVYGRAT---FGWAYWAYKFAE 441 (535)
Q Consensus 405 ~~~~~~~~~~~~~~~~ql~~~~~~~---~Gw~~W~~k~~~ 441 (535)
. ....+|++.+++.+++++ +||++|++++-+
T Consensus 246 -----~-~~~~~~~~~~~~~~~~~~~~~ig~~~W~~g~~~ 279 (305)
T 1h1n_A 246 -----D-NVCETAITGMLDYMAQNTDVWTGAIWWAAGPWW 279 (305)
T ss_dssp -----S-HHHHHHHHHHHHHHHTCTTTEEEEEEEEECTTC
T ss_pred -----C-hHHHHHHHHHHHHHHHcCCeeEEEEEECCCCCC
Confidence 1 456788999999999999 999999987754
|
| >1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-32 Score=283.03 Aligned_cols=255 Identities=16% Similarity=0.224 Sum_probs=179.8
Q ss_pred HhhhC-ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCC
Q 046395 174 RDHWK-SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSP 252 (535)
Q Consensus 174 ~~hw~-~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~ 252 (535)
+.+|. .+++++||+.||++|+|+|||||.|+.+. |.++..++++.++.||++|++|.++||+||||+|+.++...+.
T Consensus 54 e~~W~~~~~~~~di~~i~~~G~n~vRipv~w~~~~-~~~~~~~~~~~l~~l~~~v~~a~~~Gi~vild~H~~~~w~~~~- 131 (380)
T 1edg_A 54 ETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHV-SGSDYKISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGY- 131 (380)
T ss_dssp HHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGE-ETTTTEECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSB-
T ss_pred cCcCCCCcccHHHHHHHHHcCCCEEEecccHHhhc-CCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEeCCCchhhhcCC-
Confidence 46674 46889999999999999999999986554 3333346778899999999999999999999999987532211
Q ss_pred CCCCCCCCCCCC-hHHHHHH-HHHHHHHHHHhCCCCcEEEEEeecCCCCCC--CCh-------------HHHHHHHHHHH
Q 046395 253 HSGSRDGFQEWS-DSDIQET-VAIIDFLASRYADHPSLVAIELMNEPKAPD--LKL-------------DSLKTYYKAGY 315 (535)
Q Consensus 253 ~sg~~~~~~~W~-~~~~~~~-~~~~~~la~ry~~~p~V~~~el~NEP~~~~--~~~-------------~~~~~~~~~~~ 315 (535)
.+.+. +...+++ .++|++||+||+++|.|++|||+|||.... ... ..+..|+++++
T Consensus 132 -------~~~~~~~~~~~~~~~~~w~~ia~~~~~~~~v~~~el~NEP~~~~~~~~W~~~~~~g~~~~~~~~l~~~~~~~~ 204 (380)
T 1edg_A 132 -------FPSSQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFV 204 (380)
T ss_dssp -------CSSGGGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred -------CCccccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEecCCCCcCCCCcccccccCCCchHHHHHHHHHHHHHHH
Confidence 11222 5678899 999999999999999999999999998642 111 56789999999
Q ss_pred HHHHhc---CCCcEEEEcC-CCCCChhhhhcc--cCC----CCcEEEEEeecCcCCCcccCCCh------------hhhH
Q 046395 316 DTVRKY---SSSAYVILSN-RLGGEWSELLSF--ASN----LSRVVIDVHFYNLFWDNFNKMSV------------QQNI 373 (535)
Q Consensus 316 ~aIR~~---~p~~~ii~~~-~~g~~~~~~~~~--~~~----~~n~v~d~H~Y~~~~~~~~~~~~------------~~~i 373 (535)
++||+. +|+++|++++ .|+.+...+..+ +.. .+++||++|+|.++. |.+... ....
T Consensus 205 ~~IR~~g~~np~~~Iiv~g~~~~~~~~~~~~~~~p~d~~~~~~n~v~s~H~Y~~~~--f~~~~~~~~g~~~w~~~~~~~~ 282 (380)
T 1edg_A 205 NTVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWN--FAGLAMADGGTNAWNINDSKDQ 282 (380)
T ss_dssp HHHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHH--HHTSCGGGTCCCCCCTTCHHHH
T ss_pred HHHHhcCCCCCCceEEECCCcCCccccccccccCCCCCccccCcEEEEEeecCCcc--cccccccCCCCCccCCCchhhH
Confidence 999999 4888888865 232222222222 222 239999999998752 211110 1112
Q ss_pred HHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCCC
Q 046395 374 DYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443 (535)
Q Consensus 374 ~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~ 443 (535)
+.+...... +.......+.|++|||||+.... ..+...+|++.+++.+++.++||++|++...++.
T Consensus 283 ~~i~~~~~~-~~~~~~~~g~Pv~igEfG~~~~~---~~~~~~~~~~~~~~~~~~~gig~~~W~~g~~~g~ 348 (380)
T 1edg_A 283 SEVTWFMDN-IYNKYTSRGIPVIIGECGAVDKN---NLKTRVEYMSYYVAQAKARGILCILWDNNNFSGT 348 (380)
T ss_dssp HHHHHHHHH-HHHHTGGGTCCEEEEEECCCCSS---CHHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSS
T ss_pred HHHHHHHHH-HHHHHHHcCCCEEEEeccCCCCC---ChHHHHHHHHHHHHHHHHCCCceEEECCCCCCCC
Confidence 233322222 22222233556999999986542 3345667889999999999999999998654443
|
| >3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-32 Score=277.41 Aligned_cols=246 Identities=18% Similarity=0.371 Sum_probs=181.5
Q ss_pred HhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCC
Q 046395 174 RDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPH 253 (535)
Q Consensus 174 ~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~ 253 (535)
++||.++++++||+.||++|+|+||+|+.|+.+.....+..+++..++.+|++|++|.++||+||||+|+.++.+.
T Consensus 27 ~~~w~~~~~~~d~~~l~~~G~n~vR~~i~w~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~Gi~vild~h~~~~~~~---- 102 (317)
T 3aof_A 27 EGDWGVVIKDEFFDIIKEAGFSHVRIPIRWSTHAYAFPPYKIMDRFFKRVDEVINGALKRGLAVVINIHHYEELMN---- 102 (317)
T ss_dssp TTTTSCCCCTHHHHHHHHHTCSEEEECCCGGGGBCSSTTCCBCHHHHHHHHHHHHHHHHTTCEEEEECCCCHHHHH----
T ss_pred CCcCCCCCCHHHHHHHHHcCCCEEEEeccHHHhcCCCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEecCCccccC----
Confidence 3789889999999999999999999999986554322222355778999999999999999999999998754221
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR- 332 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~- 332 (535)
. .+...+++.++|+.|++||+++|.|++|||+|||.. ..+...|..++++++++||+++|+++|++++.
T Consensus 103 ------~---~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~-~~~~~~~~~~~~~~~~~iR~~~p~~~i~v~~~~ 172 (317)
T 3aof_A 103 ------D---PEEHKERFLALWKQIADRYKDYPETLFFEILNAPHG-NLTPEKWNELLEEALKVIRSIDKKHTIIIGTAE 172 (317)
T ss_dssp ------C---HHHHHHHHHHHHHHHHHHHTTSCTTEEEECCSSCCT-TSCHHHHHHHHHHHHHHHHHHCSSSCEEECCSG
T ss_pred ------C---cHHHHHHHHHHHHHHHHHhcCCCCeEEEEeccCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEECCCC
Confidence 0 146789999999999999999999999999999996 34678999999999999999999999999763
Q ss_pred CCCChhhhhcc--cCCCCcEEEEEeecCcCCCcccCC----------------ChhhhHHHHHHhhhHHHHHHhhcCCCc
Q 046395 333 LGGEWSELLSF--ASNLSRVVIDVHFYNLFWDNFNKM----------------SVQQNIDYIYRQRSSDLRNVTTSDGPL 394 (535)
Q Consensus 333 ~g~~~~~~~~~--~~~~~n~v~d~H~Y~~~~~~~~~~----------------~~~~~i~~i~~~~~~~l~~~~~~~~p~ 394 (535)
|+ ....+..+ +....++++++|+|.++. |++. ......+.+...... +..+.+..+.|
T Consensus 173 ~~-~~~~~~~~~~p~~~~~~v~~~H~Y~~~~--~~~~~~~w~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~g~P 248 (317)
T 3aof_A 173 WG-GISALEKLSVPKWEKNSIVTIHYYNPFE--FTHQGAEWVEGSEKWLGRKWGSPDDQKHLIEEFNF-IEEWSKKNKRP 248 (317)
T ss_dssp GG-SSTTGGGCCCCTTCCSEEEEEECCCSHH--HHTTTCTTSTTGGGGTTCCCCCHHHHHHHHHHHHH-HHHHHHHHTCC
T ss_pred cC-cHhHHhhCcCCCCCCCEEEEEeccCCcc--cccCCCCCcCcccccCCcCcCcHHHHHHHHHHHHH-HHHHHHHcCCC
Confidence 42 11222222 223579999999998742 1110 011112233333222 22222233566
Q ss_pred EEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 395 SFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 395 v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
++|||||+... .+.+...+|++.+++.+++.++||++|+++..
T Consensus 249 v~igEfG~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~~ 291 (317)
T 3aof_A 249 IYIGEFGAYRK---ADLESRIKWTSFVVREMEKRRWSLAYWEFCSG 291 (317)
T ss_dssp EEEEECCCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSSST
T ss_pred EEEeeccccCC---CCHHHHHHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 99999998653 23455567888999999999999999999853
|
| >1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=269.27 Aligned_cols=218 Identities=17% Similarity=0.279 Sum_probs=159.6
Q ss_pred ccchHHHHHHHH-HcCCCEEEeCCccccccCCCCCCCCc----cchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMS-QNGLNAVRIPVGWWIAYDPKPPKPFV----GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPH 253 (535)
Q Consensus 179 ~~ite~D~~~ik-~~G~N~VRipv~~w~~~~p~~~~~~~----~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~ 253 (535)
.+++++||+.|| ++|+|+||+|+.|. |.++. |. ++.++.||++|++|.++||+||||+|+.++.
T Consensus 37 ~~~~~~di~~~~~~~G~N~vRi~~~~~----~~~~~-~~~~~p~~~~~~ld~~v~~a~~~Gi~vild~h~~~~~------ 105 (293)
T 1tvn_A 37 KFYTAETVAKAKTEFNATLIRAAIGHG----TSTGG-SLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEAH------ 105 (293)
T ss_dssp GGCSHHHHHHHHHHHCCSEEEEEEECC----TTSTT-STTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCGG------
T ss_pred CCCCHHHHHHHHHhcCCCEEEEecccc----CCCCC-ccccChHHHHHHHHHHHHHHHHCCCEEEEEcCCCCcc------
Confidence 467899999999 59999999999873 33332 43 4689999999999999999999999986531
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-C
Q 046395 254 SGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-R 332 (535)
Q Consensus 254 sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~ 332 (535)
.+.+.+.++|++|++||+++|+|+ |||+|||..... ...++.|+++++++||+.+|+++|++++ .
T Consensus 106 ------------~~~~~~~~~~~~~a~r~~~~p~V~-~el~NEP~~~~~-~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~ 171 (293)
T 1tvn_A 106 ------------TDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQISW-VNDIKPYAETVIDKIRAIDPDNLIVVGTPT 171 (293)
T ss_dssp ------------GCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSCCT-TTTHHHHHHHHHHHHHTTCCSCEEEECCHH
T ss_pred ------------ccHHHHHHHHHHHHHHhCCCCeEE-EEccCCCCCCch-HHHHHHHHHHHHHHHHhhCCCCEEEECCCC
Confidence 357899999999999999999998 999999986321 2578999999999999999999999975 3
Q ss_pred CCCChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC--CCC
Q 046395 333 LGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE--GAS 410 (535)
Q Consensus 333 ~g~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~--~~~ 410 (535)
|+.+.......+...++++|++|.|.+.. .+ .+.. .+.... ..+.|++|||||+..... ...
T Consensus 172 ~~~~~~~~~~~p~~~~n~v~s~H~Y~~~~--------~~---~~~~----~~~~~~-~~~~Pv~igEfG~~~~~~~g~~~ 235 (293)
T 1tvn_A 172 WSQDVDVASQNPIDRANIAYTLHFYAGTH--------GQ---SYRN----KAQTAL-DNGIALFATEWGTVNADGNGGVN 235 (293)
T ss_dssp HHTCHHHHHHSCCCSSSEEEEEEEETTTC--------CH---HHHH----HHHHHH-HTTCCEEEEEEESSCTTSCSCCC
T ss_pred cccccchhccCCCCCCCEEEEEEeCCCCc--------hH---HHHH----HHHHHH-HCCCcEEEEcccCcCCCCCCCCC
Confidence 43343322222234578999999997631 11 1211 122222 335569999999865322 122
Q ss_pred HHHHHHHHHHHHHHHhhCCcceEEEeeeeCC
Q 046395 411 KRDYQRFAEAQLDVYGRATFGWAYWAYKFAE 441 (535)
Q Consensus 411 ~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~ 441 (535)
.+...+ +++.+++.++||++|+|+...
T Consensus 236 ~~~~~~----~~~~~~~~~~g~~~W~~~~~~ 262 (293)
T 1tvn_A 236 INETDA----WMAFFKTNNISHANWALNDKN 262 (293)
T ss_dssp HHHHHH----HHHHHHHHTCCEEEEEESCSS
T ss_pred HHHHHH----HHHHHHHCCCeeEEEecCCCC
Confidence 333333 345677778999999999854
|
| >4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-32 Score=286.31 Aligned_cols=296 Identities=18% Similarity=0.218 Sum_probs=203.1
Q ss_pred CceEEEecccEEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCE
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNA 196 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~ 196 (535)
-.+|++++++|++.++ +|-.+.+. + ..|.... .....| .++||+.||++|+|+
T Consensus 49 ~~~l~v~G~~~~d~nG---------~~~~l~Gv--n----------~~~~~~~--~~~g~~----~~~di~~ik~~G~N~ 101 (359)
T 4hty_A 49 LPLIKVEGNRFVDEQG---------KTIVFRGV--N----------ISDPDKI--DKDKRF----SKKHFEVIRSWGANV 101 (359)
T ss_dssp CCCCEEETTEEECTTC---------CEECCEEE--E----------ECCHHHH--HHTTCC----SHHHHHHHHHTTCSE
T ss_pred CCcEEEeCCEEECCCC---------CEEEEEEE--e----------cCCcccC--CCCCCc----CHHHHHHHHhcCCCE
Confidence 4678999999987554 34334332 2 1222111 112333 389999999999999
Q ss_pred EEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-h---HHHHHHH
Q 046395 197 VRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-D---SDIQETV 272 (535)
Q Consensus 197 VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~---~~~~~~~ 272 (535)
||+|+.|+.+. +. ..+..++.||++|++|.++||+||||+|..++.+++ .|. + ...+.+.
T Consensus 102 VRi~~~~~~~~-~~----~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~-----------~~~~~~~~~~~~~~~ 165 (359)
T 4hty_A 102 VRVPVHPRAWK-ER----GVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSE-----------MFQNNSYHTTKGETF 165 (359)
T ss_dssp EEEEECHHHHH-HH----HHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTT-----------EESSGGGCCCHHHHH
T ss_pred EEEeccHHHhh-cc----CCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcc-----------cccCCcchhHHHHHH
Confidence 99999886532 21 134589999999999999999999999987654322 122 2 2478999
Q ss_pred HHHHHHHHHhCCCCcEEEEEeecCCCCC-----CCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-CCCCChhhhhcccCC
Q 046395 273 AIIDFLASRYADHPSLVAIELMNEPKAP-----DLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-RLGGEWSELLSFASN 346 (535)
Q Consensus 273 ~~~~~la~ry~~~p~V~~~el~NEP~~~-----~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~~g~~~~~~~~~~~~ 346 (535)
++|++|++||+++|+|++|+|+|||... ..+...|+.++++++++||+++|+++|++++ .|+.++..+...+..
T Consensus 166 ~~~~~la~ryk~~p~Vi~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~g~~w~~~~~~~~~~p~~ 245 (359)
T 4hty_A 166 DFWRRVSERYNGINSVAFYEIFNEPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVAGFNWAYDLKEAAANPID 245 (359)
T ss_dssp HHHHHHHHHTTTCTTEEEEESCSEECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEECHHHHTCCHHHHHSCCS
T ss_pred HHHHHHHHHhCCCCcEEEEEeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEcCcccccccchhhcCCCC
Confidence 9999999999999999999999999863 2356789999999999999999999999876 354555555443445
Q ss_pred CCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC-CCC--HHHHHHHHHHHHH
Q 046395 347 LSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE-GAS--KRDYQRFAEAQLD 423 (535)
Q Consensus 347 ~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~-~~~--~~~~~~~~~~ql~ 423 (535)
.++++|++|+|.++.. .+.. +. ....+..+. . +.|+||||||...... +.. .....+|.+..++
T Consensus 246 ~~n~~ys~H~Y~~~~~----~~~~---~~----~~~~~~~~~-~-~~Pv~vtEfG~~~~~g~g~~~~~~~~~~y~~~~~~ 312 (359)
T 4hty_A 246 RQNIAYVSHPYPQKVG----APYQ---AN----WERDFGFMA-D-KYPVFATEIGYQRATDKGAHIPVIDDGSYGPRITD 312 (359)
T ss_dssp SSSEEEECCCCTTSSC----SSHH---HH----HHHHTGGGG-G-TSCEEEEEECCBCTTSTTCCTTSBCCSTHHHHHHH
T ss_pred CCCEEEEEEeCCCCCC----cchH---HH----HHHHHHHHh-c-CCCEEEecccCCCCCCCCcccccccHHHHHHHHHH
Confidence 6899999999987521 1111 11 111122222 2 4569999999864321 110 0011245555567
Q ss_pred HHhhCCcceEEEeeeeCCCCCCceeccCCCccccccccccccccCcCCCC
Q 046395 424 VYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHIFSSLNEP 473 (535)
Q Consensus 424 ~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~~~W~~~~~~~~~~l~~~ 473 (535)
.+.++++||++|+|++.+++. ++.+|.+ ...++.++.+|+.|.+.
T Consensus 313 ~~~~~~i~~~~Ws~~~~~~~~---~~~~w~~--~~~t~~G~~~k~~l~~~ 357 (359)
T 4hty_A 313 YFNSKGISWVAWVFDPDWSPQ---LFTDYQT--YTPTMQGEHFRKVMLQD 357 (359)
T ss_dssp HHHHHTCEEEEEEESSSSSSC---SBSCTTT--CCBCHHHHHHHHHHHHH
T ss_pred HHHHcCCeEEEEEeCCCCcch---hhhcccc--CCCchhhHHHHHHHHhh
Confidence 777789999999999976653 4555543 34467788888776543
|
| >2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=274.56 Aligned_cols=255 Identities=18% Similarity=0.279 Sum_probs=179.6
Q ss_pred HhhhC-ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCC
Q 046395 174 RDHWK-SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSP 252 (535)
Q Consensus 174 ~~hw~-~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~ 252 (535)
+.||. .+++++||+.||++|+|+|||||.|+.+++|.++..++++.++.||++|++|.++||+||||+|+.... .
T Consensus 62 ~~~w~~~~~~~~d~~~l~~~G~n~vRl~i~w~~~~~~~~~~~~~~~~l~~~d~~v~~a~~~Gi~vild~h~~~~~-~--- 137 (395)
T 2jep_A 62 ETAWGNPTVTPELIKKVKAAGFKSIRIPVSYLNNIGSAPNYTINAAWLNRIQQVVDYAYNEGLYVIINIHGDGYN-S--- 137 (395)
T ss_dssp TTTTSCCCCCHHHHHHHHHTTCCEEEECCCCGGGBCCTTTCCBCHHHHHHHHHHHHHHHTTTCEEEECCCGGGCT-T---
T ss_pred ccccCCCcCcHHHHHHHHHcCCCEEEEeeeeccccCCCCCCccCHHHHHHHHHHHHHHHHCCCEEEEECCCcccc-C---
Confidence 46886 578999999999999999999999987776654445778899999999999999999999999986211 1
Q ss_pred CCCCCCCCCCCC-------hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC---CC---hHHHHHHHHHHHHHHH
Q 046395 253 HSGSRDGFQEWS-------DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD---LK---LDSLKTYYKAGYDTVR 319 (535)
Q Consensus 253 ~sg~~~~~~~W~-------~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~---~~---~~~~~~~~~~~~~aIR 319 (535)
. ...|. +...+.+.++|++|++||+++|.|++|||+|||.... .+ ...+..|+++++++||
T Consensus 138 -~-----~g~w~~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~w~~~~~~~~~~~~~~~~~~~~aIR 211 (395)
T 2jep_A 138 -V-----QGGWLLVNGGNQTAIKEKYKKVWQQIATKFSNYNDRLIFESMNEVFDGNYGNPNSAYYTNLNAYNQIFVDTVR 211 (395)
T ss_dssp -S-----TTCCCCTTCSCHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCSCSCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred -C-----CCccccCCcccHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeecCCCCCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 0 01121 3467899999999999999999999999999998632 11 2578999999999999
Q ss_pred hcC---CCcEEEEcCCCCCChhh-h----hccc----------CCCCcEEEEEeecCcCCC---------cccC--CChh
Q 046395 320 KYS---SSAYVILSNRLGGEWSE-L----LSFA----------SNLSRVVIDVHFYNLFWD---------NFNK--MSVQ 370 (535)
Q Consensus 320 ~~~---p~~~ii~~~~~g~~~~~-~----~~~~----------~~~~n~v~d~H~Y~~~~~---------~~~~--~~~~ 370 (535)
+++ |+++|++++ +..+... + +..+ ...+++|+++|+|.++.. .+.. ....
T Consensus 212 ~~~~~np~~~I~v~g-~~~~~~~~~~~~~~~~p~d~~~~~~i~~~~~~~v~s~H~Y~~~~~~~~~~~~~~~W~~~~~~~~ 290 (395)
T 2jep_A 212 QTGGNNNARWLLVPG-WNTNIDYTVGNYGFTLPTDNYRSSAIPSSQKRIMISAHYYSPWDFAGEENGNITQWGATSTNPA 290 (395)
T ss_dssp TSSGGGGTSCEEEEC-GGGCHHHHHSSSSCCCCCCTTSCTTSCTTCCCEEEEEEECCSHHHHTCSSSSCCBCSTTCSCGG
T ss_pred HhCCCCCCcEEEECC-CccCcccccccccccCCCCccccccCCCCCCCEEEEEEecCCccccCcccccccccccccCCcc
Confidence 994 678888865 2211111 0 1111 124799999999987421 0100 0010
Q ss_pred ----hh-HHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC-CC-CHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 371 ----QN-IDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE-GA-SKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 371 ----~~-i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~-~~-~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
.. .+.+...+......+.+ .+.|++|||||+..... +. +.+...+|++.+++.+.+.++||+||+++..
T Consensus 291 ~~~~~~~~~~i~~~~~~~~~~~~~-~g~Pv~igEfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~W~~~~~ 366 (395)
T 2jep_A 291 KKSTWGQEDYLESQFKSMYDKFVT-QGYPVVIGEFGSIDKTSYDSSNNVYRAAYAKAVTAKAKKYKMVPVYWDNGHN 366 (395)
T ss_dssp GBCSSCSHHHHHHHHHHHHHHTGG-GTCCEEEEEECCCCCTTTCTTHHHHHHHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cccccCcHHHHHHHHHHHHHHHHH-cCCCEEEeeccccCCCCccCCChHHHHHHHHHHHHHHHHCCCeEEEECCCCC
Confidence 00 02233222222222333 35569999999875422 11 2334568999999999999999999999875
|
| >1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=277.08 Aligned_cols=235 Identities=17% Similarity=0.258 Sum_probs=162.9
Q ss_pred ccchHHHHHHHH-HcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC-CCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMS-QNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL-RVSQNGSPHSGS 256 (535)
Q Consensus 179 ~~ite~D~~~ik-~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~~ng~~~sg~ 256 (535)
.+++++||+.|+ ++|+|+||||+.|. .++..+++..++.||++|++|.++||+||||+|+. ||++++
T Consensus 52 ~~~~~~d~~~l~~~~G~N~VRip~~~~-----~~~~~~~~~~l~~ld~~v~~a~~~Gi~VIld~H~~~~g~~~~------ 120 (364)
T 1g01_A 52 EIVNENAFVALSNDWGSNMIRLAMYIG-----ENGYATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPRA------ 120 (364)
T ss_dssp GGCSHHHHHHHHTTSCCSEEEEEEESS-----SSSTTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTTS------
T ss_pred CccCHHHHHHHHHHCCCCEEEEEeeeC-----CCCCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCCCh------
Confidence 457899999996 99999999999862 23334677789999999999999999999999984 554321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhC---CCCcEEEEEeecCCCCCC-----C-----ChHHHHHHHHHHHHHHHhcCC
Q 046395 257 RDGFQEWSDSDIQETVAIIDFLASRYA---DHPSLVAIELMNEPKAPD-----L-----KLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 257 ~~~~~~W~~~~~~~~~~~~~~la~ry~---~~p~V~~~el~NEP~~~~-----~-----~~~~~~~~~~~~~~aIR~~~p 323 (535)
...+.+.++|++||+||+ ++|+|+ |||+|||.... . ....++.|+++++++||+++
T Consensus 121 ---------~~~~~~~~~w~~ia~~y~~~~~~~~Vi-~el~NEP~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~IR~~~- 189 (364)
T 1g01_A 121 ---------DVYSGAYDFFEEIADHYKDHPKNHYII-WELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKG- 189 (364)
T ss_dssp ---------GGGTTHHHHHHHHHHHHTTCTTGGGEE-EECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ---------HHHHHHHHHHHHHHHHhhccCCCCeEE-EEcCCCCCcCcCCCcCCCCCHHHHHHHHHHHHHHHHHHHhcC-
Confidence 123468899999999999 778998 99999998631 1 12467889999999999999
Q ss_pred CcEEEEcC-CCCCChhhhhcccCCCCcEEEEEeecCcCCCc----ccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEe
Q 046395 324 SAYVILSN-RLGGEWSELLSFASNLSRVVIDVHFYNLFWDN----FNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVG 398 (535)
Q Consensus 324 ~~~ii~~~-~~g~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~----~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vG 398 (535)
+++|++++ .|+.++......+..++++||++|+|.++... +.....++..+.+. ..+..+.+ .+.|+|||
T Consensus 190 ~~~I~v~~~~w~~~~~~~~~~p~~~~niv~s~H~Y~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~g~Pv~ig 264 (364)
T 1g01_A 190 DNMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVM----ANVRYALD-NGVAVFAT 264 (364)
T ss_dssp CCCEEECCHHHHTCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGGGCCCHH----HHHHHHHH-TTCCEEEE
T ss_pred CcEEEECCCCcccccchhhcCCCCCCCEEEEEEecCCccCCCCCCCCCCchHHHHHHHH----HHHHHHHH-CCCeEEEE
Confidence 99999875 35444433322233468999999999885421 11001111111111 11222333 35569999
Q ss_pred ccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCC
Q 046395 399 EWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAES 442 (535)
Q Consensus 399 Efg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~ 442 (535)
|||+........ ....+.+.+++.+++.++||++|+|+....
T Consensus 265 EfG~~~~~~~~~--~~~~~~~~~~~~~~~~~ig~~~W~~~~~~~ 306 (364)
T 1g01_A 265 EWGTSQANGDGG--PYFDEADVWLNFLNKHNISWANWSLTNKNE 306 (364)
T ss_dssp EEESSBTTTBSC--CCHHHHHHHHHHHHHTTCCEEEEEECCSSS
T ss_pred ccccccCCCCCC--cCHHHHHHHHHHHHHCCCceEEEeCCCCCC
Confidence 999864211111 112344556678888999999999998643
|
| >1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-31 Score=264.38 Aligned_cols=246 Identities=16% Similarity=0.216 Sum_probs=172.3
Q ss_pred ccchHHHHHHHH-HcCCCEEEeCCccccccCCCCCCCCcc-chHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCC
Q 046395 179 SYITEEDFKFMS-QNGLNAVRIPVGWWIAYDPKPPKPFVG-GSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGS 256 (535)
Q Consensus 179 ~~ite~D~~~ik-~~G~N~VRipv~~w~~~~p~~~~~~~~-~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~ 256 (535)
.+++++||+.|| ++|+|+||+|+.|. +. .+...++ ..++.||++|++|.++||+||||+|+.++
T Consensus 37 ~~~~~~d~~~l~~~~G~N~vR~~~~~~---~~-~~~~~~~~~~~~~ld~~v~~a~~~Gi~vild~h~~~~---------- 102 (291)
T 1egz_A 37 KFYTADTVASLKKDWKSSIVRAAMGVQ---ES-GGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA---------- 102 (291)
T ss_dssp GGCSHHHHHHHHHTTCCCEEEEEEECS---ST-TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG----------
T ss_pred ccCCHHHHHHHHHHcCCCEEEEecccc---cc-CCCcCCHHHHHHHHHHHHHHHHHCCCEEEEEcCCCCc----------
Confidence 457899999999 89999999999873 11 1111132 47999999999999999999999998642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-CCC
Q 046395 257 RDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR-LGG 335 (535)
Q Consensus 257 ~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g~ 335 (535)
+.+.+.+.++|++|++||+++|+|+ |||+|||.... ....+..|+++++++||+.+|+++|++++. |+.
T Consensus 103 --------~~~~~~~~~~~~~ia~r~~~~p~V~-~el~NEP~~~~-~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~ 172 (291)
T 1egz_A 103 --------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQVS-WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQ 172 (291)
T ss_dssp --------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCSCC-TTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHT
T ss_pred --------chhHHHHHHHHHHHHHHhCCCCcEE-EEecCCCCCCc-hHHHHHHHHHHHHHHHHhcCCCCEEEECCCCccc
Confidence 2577899999999999999999998 99999999632 124789999999999999999999999763 433
Q ss_pred ChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCC--CCHHH
Q 046395 336 EWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEG--ASKRD 413 (535)
Q Consensus 336 ~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~--~~~~~ 413 (535)
+.......+..+++++|++|.|.+.. ++ .+.. .+.... ..+.|++|||||+...... ...+
T Consensus 173 ~~~~~~~~p~~~~~~~~s~H~Y~~~~--------~~---~~~~----~~~~~~-~~~~Pv~igEfG~~~~~~~g~~~~~- 235 (291)
T 1egz_A 173 NVDEASRDPINAKNIAYTLHFYAGTH--------GE---SLRN----KARQAL-NNGIALFVTEWGTVNADGNGGVNQT- 235 (291)
T ss_dssp CHHHHHTSCCCSSSEEEEEEEETTTC--------CH---HHHH----HHHHHH-HTTCCEEEEEEESSCTTSCSCCCHH-
T ss_pred ccchhhcCCCCCCCEEEEEEecCCCC--------hH---HHHH----HHHHHH-HCCCcEEEecccCcCCCCCCCcCHH-
Confidence 43332222233478999999997521 11 1211 122222 2355699999998643221 2222
Q ss_pred HHHHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCCccccccccccccccCcCCCC
Q 046395 414 YQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHIFSSLNEP 473 (535)
Q Consensus 414 ~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~~~W~~~~~~~~~~l~~~ 473 (535)
+.+.+++.+++.++||++|+|+..... .-++.+++ ...+..+.++++.|.+.
T Consensus 236 ---~~~~~~~~~~~~~~g~~~W~~~~~~~~--~~~~~~~~---~~~~~~g~~~~~~~~~~ 287 (291)
T 1egz_A 236 ---ETDAWVTFMRDNNISNANWALNDKNEG--ASTYYPDS---KNLTESGKKVKSIIQSW 287 (291)
T ss_dssp ---HHHHHHHHHHHTTCCEEEEEECCSSST--TCSBCTTS---CCBCHHHHHHHHHHHTC
T ss_pred ---HHHHHHHHHHHCCCeEEEEecCCCCCc--cceecCCC---CCcChhHHHHHHHHhcc
Confidence 233445677788899999999885422 22333333 23556666666666543
|
| >2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-31 Score=284.56 Aligned_cols=251 Identities=21% Similarity=0.351 Sum_probs=179.0
Q ss_pred ccchHHHH-HHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCC-------CCCCC--
Q 046395 179 SYITEEDF-KFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA-------LRVSQ-- 248 (535)
Q Consensus 179 ~~ite~D~-~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~-------~pg~~-- 248 (535)
.+++++|| +.||++|+|+||||+.|+ .++|.++. |+++.++.|+++|++|+++||+||||+|+ .|++|
T Consensus 64 ~~~~~~di~~~l~~~G~N~VRl~v~w~-~~~p~~g~-~~~~~l~~l~~~v~~a~~~Gi~vildlH~d~~~~~~~P~~~~~ 141 (481)
T 2osx_A 64 PQFTEADLAREYADMGTNFVRFLISWR-SVEPAPGV-YDQQYLDRVEDRVGWYAERGYKVMLDMHQDVYSGAITPEGNSG 141 (481)
T ss_dssp CSCCHHHHHHHHHHHCCCEEEEEECHH-HHCSBTTB-CCHHHHHHHHHHHHHHHHTTCEEEEEECCBSSCGGGSTTTCSB
T ss_pred ccccHHHHHHHHHHCCCCEEEEeCcHH-HcCCCCCC-cCHHHHHHHHHHHHHHHHCCCEEEEEccccccccccccccccc
Confidence 45779999 999999999999999874 55777664 89999999999999999999999999998 67776
Q ss_pred CCCCCCCCCCCCCCC------------------------------------C-hHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 046395 249 NGSPHSGSRDGFQEW------------------------------------S-DSDIQETVAIIDFLASRYADHPSLVAI 291 (535)
Q Consensus 249 ng~~~sg~~~~~~~W------------------------------------~-~~~~~~~~~~~~~la~ry~~~p~V~~~ 291 (535)
|+++..| .+.+.| . +..++++.++|+.|++||+++|+|++|
T Consensus 142 ng~~~gg--~g~P~W~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~la~ryk~~p~Vi~~ 219 (481)
T 2osx_A 142 NGAGAIG--NGAPAWATYMDGLPVEPQPRWELYYIQPGVMRAFDNFWNTTGKHPELVEHYAKAWRAVADRFADNDAVVAY 219 (481)
T ss_dssp TTBCSSS--BSSCGGGCCCTTCCCCCCSSGGGGGGSHHHHHHHHHHTTTTSSCTHHHHHHHHHHHHHHHHHTTCTTEEEE
T ss_pred cccccCC--CCCccceeccCCCCccccccchhhccchhhHHHHHHHhccccCCHHHHHHHHHHHHHHHHHhcCCCcEEEE
Confidence 3443211 111212 1 457889999999999999999999999
Q ss_pred EeecCCCCCCC-----ChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-CCCChh---hhhccc---CCCCcEEEEEeecCc
Q 046395 292 ELMNEPKAPDL-----KLDSLKTYYKAGYDTVRKYSSSAYVILSNR-LGGEWS---ELLSFA---SNLSRVVIDVHFYNL 359 (535)
Q Consensus 292 el~NEP~~~~~-----~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g~~~~---~~~~~~---~~~~n~v~d~H~Y~~ 359 (535)
||+|||..... +...+..++++++++||+++|+++|++++. |+.++. .+..+. ...+++|+++|+|.+
T Consensus 220 el~NEP~~~~~~~~~~~~~~l~~~~~~~~~aIR~~dp~~~I~v~~~~~~~~~~~~~~l~~~~~p~~~~~~~v~s~H~Y~~ 299 (481)
T 2osx_A 220 DLMNEPFGGSLQGPAFEAGPLAAMYQRTTDAIRQVDQDTWVCVAPQAIGVNQGLPSGLTKIDDPRAGQQRIAYCPHLYPL 299 (481)
T ss_dssp ECCSSCCCTTCCTHHHHTTHHHHHHHHHHHHHTTTCSSSEEEECCCSTTGGGTCCCCCCCCCCCSSSSCCEEECCBCCCH
T ss_pred EeecCCCCCCCCCccccHHHHHHHHHHHHHHHHhhCCCcEEEEcCcccccccCCCCCCcccCCCcccCCCEEEEEEecCc
Confidence 99999997421 245789999999999999999999999863 432221 121111 124689999999976
Q ss_pred C---CCcccCCChhhhHHHHHHhhhHHHHHHhhcC-CCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEE
Q 046395 360 F---WDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD-GPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYW 435 (535)
Q Consensus 360 ~---~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~-~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W 435 (535)
+ ...+.....+.....+...+ ..+..+.+.. +.|++|||||...+. ....+|++.+++.+.+.++||+||
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~Pv~igEfG~~~~~-----~~~~~~~~~~~~~~~~~~ig~~~W 373 (481)
T 2osx_A 300 PLDIGDGHEGLARTLTDVTIDAWR-ANTAHTARVLGDVPIILGSFGLDTTL-----PGARDYIERVYGTAREMGAGVSYW 373 (481)
T ss_dssp HHHHTTSSSHHHHHHHHHHHHHHH-HHHHHHHHHTTSCCBEECBCCCCTTS-----TTHHHHHHHHHHHHHHHTCEEEES
T ss_pred ccccCCccCccchhhHHHHHHHHH-HHHHHHHHHhcCCCEEEeccCCCCCc-----hHHHHHHHHHHHHHHHcCCCeEEE
Confidence 3 11121111111111222222 2233344344 667999999964321 134567888888888888999999
Q ss_pred eeee
Q 046395 436 AYKF 439 (535)
Q Consensus 436 ~~k~ 439 (535)
+++.
T Consensus 374 ~~~~ 377 (481)
T 2osx_A 374 SSDP 377 (481)
T ss_dssp CCSS
T ss_pred CCCC
Confidence 9986
|
| >2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.9e-31 Score=264.31 Aligned_cols=213 Identities=14% Similarity=0.224 Sum_probs=159.8
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
+++||+.||++|+|+||||+.. +.+|.++.++.||++|++|.++||+||||+|..++.++
T Consensus 33 ~~~~~~~i~~~G~N~VRi~~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~Vild~H~~~~~~~------------ 92 (294)
T 2whl_A 33 ASTAIPAIAEQGANTIRIVLSD--------GGQWEKDDIDTIREVIELAEQNKMVAVVEVHDATGRDS------------ 92 (294)
T ss_dssp HHHHHHHHHHTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC------------
T ss_pred hHHHHHHHHHcCCCEEEEEecC--------CCccCccHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc------------
Confidence 6899999999999999999962 12366678999999999999999999999998765321
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCC-CcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-CCCCChh-
Q 046395 262 EWSDSDIQETVAIIDFLASRYADH-PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-RLGGEWS- 338 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry~~~-p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~~g~~~~- 338 (535)
....+++.++|++||+||+++ +.| +|||+|||... .+...|..++++++++||+.+|+++|++++ .|+....
T Consensus 93 ---~~~~~~~~~~w~~ia~~y~~~~~~v-~~el~NEP~~~-~~~~~~~~~~~~~~~~IR~~d~~~~i~v~~~~~~~~~~~ 167 (294)
T 2whl_A 93 ---RSDLNRAVDYWIEMKDALIGKEDTV-IINIANEWYGS-WDGSAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQS 167 (294)
T ss_dssp ---HHHHHHHHHHHHHTHHHHTTCTTTE-EEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHH
T ss_pred ---chhHHHHHHHHHHHHHHHcCCCCeE-EEEecCCCCCC-CChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCCCchh
Confidence 157889999999999999999 556 69999999963 455678999999999999999999999875 4533211
Q ss_pred ------hhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHH
Q 046395 339 ------ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKR 412 (535)
Q Consensus 339 ------~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~ 412 (535)
.+. ..++.++++|++|.|.++.. . .+.+.. .+..+.+ .+.|++|||||+... . .
T Consensus 168 ~~~~~~~~~-~~d~~~n~v~s~H~Y~~~~~-----~----~~~~~~----~~~~~~~-~~~Pv~igEfG~~~~-~-~--- 227 (294)
T 2whl_A 168 IHDYGQDVF-NADPLKNTMFSIHMYEYAGG-----D----ANTVRS----NIDRVID-QDLALVIGEFGHRHT-D-V--- 227 (294)
T ss_dssp HHHHHHHHH-HTCTTCCEEEEEEESTTTTS-----S----HHHHHH----HHHHHHT-TTCCEEEEEECCCCC-C-C---
T ss_pred hhhhhhccc-cCCCcCCEEEEEEeccCCCC-----c----HHHHHH----HHHHHHH-CCCCEEEEccCCCCC-C-c---
Confidence 111 11334689999999975421 1 112222 2233333 355699999998654 1 1
Q ss_pred HHHHHHHHHHHHHhhCCcceEEEeeeeCCCC
Q 046395 413 DYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443 (535)
Q Consensus 413 ~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~ 443 (535)
+.+.+++.++++++||++|+|+...++
T Consensus 228 ----~~~~~~~~~~~~~i~w~~W~~~~~~~~ 254 (294)
T 2whl_A 228 ----DEDTILSYSEETGTGWLAWSWKGNSTS 254 (294)
T ss_dssp ----CHHHHHHHHHHHTCEEEESCSSCCCGG
T ss_pred ----cHHHHHHHHHHcCCeEEEEEecCCCCC
Confidence 245667778888899999999997654
|
| >2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-31 Score=266.73 Aligned_cols=235 Identities=18% Similarity=0.260 Sum_probs=164.9
Q ss_pred cchHHHHHHHH-HcCCCEEEeCCccccccCCCCCCCCccc-hHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMS-QNGLNAVRIPVGWWIAYDPKPPKPFVGG-SLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSR 257 (535)
Q Consensus 180 ~ite~D~~~ik-~~G~N~VRipv~~w~~~~p~~~~~~~~~-~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~ 257 (535)
+++++||+.|+ ++|+|+||||+.|. . ++...++. .++.||++|++|.++||+||||+|..+++.
T Consensus 42 ~~~~~d~~~l~~~~G~N~vRi~~~~~---~--~~~~~~~~~~l~~ld~~v~~a~~~Gl~vild~h~~~~g~--------- 107 (306)
T 2cks_A 42 CLTDSSLDALAYDWKADIIRLSMYIQ---E--DGYETNPRGFTDRMHQLIDMATARGLYVIVDWHILTPGD--------- 107 (306)
T ss_dssp GCSHHHHHHHHHTSCCSEEEEEEESS---T--TSGGGCHHHHHHHHHHHHHHHHTTTCEEEEEEECCSSCC---------
T ss_pred CCCHHHHHHHHHHcCCCEEEEEeeec---C--CCcccCHHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCC---------
Confidence 46789999886 69999999999863 1 22223443 789999999999999999999999864210
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-CC--
Q 046395 258 DGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNR-LG-- 334 (535)
Q Consensus 258 ~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g-- 334 (535)
. ..+.+.+.++|++||+||+++|+|+ |||+|||.. .+...++.|+++++++||+.+|+++|++++. |+
T Consensus 108 ---~---~~~~~~~~~~~~~ia~~y~~~~~V~-~el~NEP~~--~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~ 178 (306)
T 2cks_A 108 ---P---HYNLDRAKTFFAEIAQRHASKTNVL-YEIANEPNG--VSWASIKSYAEEVIPVIRQRDPDSVIIVGTRGWSSL 178 (306)
T ss_dssp ---G---GGGHHHHHHHHHHHHHHHTTCSSEE-EECCSCCCS--SCHHHHHHHHHHHHHHHHHHCTTCCEEECCHHHHST
T ss_pred ---c---ccCHHHHHHHHHHHHHHhCCCCcEE-EEcCCCCCC--CCHHHHHHHHHHHHHHHHHhCCCCEEEECCCCcccc
Confidence 0 1357889999999999999999998 999999985 3567899999999999999999999999752 32
Q ss_pred -----CChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC--C
Q 046395 335 -----GEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA--E 407 (535)
Q Consensus 335 -----~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~--~ 407 (535)
.+.......+....+++|++|+|.++.. + .+... +.... . +.|++|||||+.... .
T Consensus 179 ~~~~~~~~~~~~~~p~~~~~~v~s~H~Y~~~~~-------~----~~~~~----~~~~~-~-~~Pv~igEfG~~~~~g~~ 241 (306)
T 2cks_A 179 GVSEGSGPAEIAANPVNASNIMYAFHFYAASHR-------D----NYLNA----LREAS-E-LFPVFVTEFGTETYTGDG 241 (306)
T ss_dssp TGGGTCCTHHHHHSCCSCSSEEEEEEEETTTCC-------H----HHHHH----HHHHH-H-HSCEEEEEEESSCTTSCS
T ss_pred ccccccchhhhhcCCCCcCCeEEEEeeCCCCcc-------H----HHHHH----HHHHh-c-CCcEEEEcccCCcCCCCC
Confidence 1223333333345789999999987521 1 11111 22122 2 345999999986431 1
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCCccccccc
Q 046395 408 GASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQ 460 (535)
Q Consensus 408 ~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~~~W~ 460 (535)
..... +.++.++.+++.++||++|+|+..... ..++.++......|+
T Consensus 242 ~~~~~----~~~~~~~~~~~~~ig~~~W~~~~~~~~--~~~l~~~~~~~~~~~ 288 (306)
T 2cks_A 242 ANDFQ----MADRYIDLMAERKIGWTKWNYSDDFRS--GAVFQPGTCASGGPW 288 (306)
T ss_dssp CCCHH----HHHHHHHHHHHHTCCEEEECCSCCSST--TSSBCTTHHHHTCCS
T ss_pred CcCHH----HHHHHHHHHHHcCCCeEEEecCCCCCc--ceeECCCCCCCCCCC
Confidence 12222 333445667778899999999886433 344555443334564
|
| >3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-30 Score=267.21 Aligned_cols=239 Identities=14% Similarity=0.179 Sum_probs=170.4
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
+++|+.||++|+|+||||+.. +.+|.++.++.||++|++|.++||+||||+|..+|+++
T Consensus 57 ~~~i~~lk~~G~N~VRip~~~--------~~~~~~~~l~~ld~~v~~a~~~GiyVIlDlH~~~g~~~------------- 115 (345)
T 3jug_A 57 STAIPAIAEQGANTIRIVLSD--------GGQWEKDDIDTVREVIELAEQNKMVAVVEVHDATGRDS------------- 115 (345)
T ss_dssp HHHHHHHHHTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHTTTCEEEEEECTTTTCCC-------------
T ss_pred HHHHHHHHHcCCCEEEEEecC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEeccCCCCCc-------------
Confidence 579999999999999999852 23477778999999999999999999999998764311
Q ss_pred CChHHHHHHHHHHHHHHHHhCCC-CcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-CCCCChhhh
Q 046395 263 WSDSDIQETVAIIDFLASRYADH-PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-RLGGEWSEL 340 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~-p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~~g~~~~~~ 340 (535)
....+++.++|+.||+||+++ +.|+ |||+|||.. ..+...|.+++++++++||+.+|+++|++++ .|+.++..+
T Consensus 116 --~~~~~~~~~~w~~iA~ryk~~~~~Vi-~el~NEP~~-~~~~~~w~~~~~~~i~~IR~~dp~~~Iiv~g~~w~~~~~~~ 191 (345)
T 3jug_A 116 --RSDLDRAVDYWIEMKDALIGKEDTVI-INIANEWYG-SWDGAAWADGYIDVIPKLRDAGLTHTLMVDAAGWGQYPQSI 191 (345)
T ss_dssp --HHHHHHHHHHHHHTHHHHTTCTTTEE-EECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTTTBTHHH
T ss_pred --HHHHHHHHHHHHHHHHHHcCCCCeEE-EEecCCCCC-CCCHHHHHHHHHHHHHHHHhhCCCCEEEEeCCCccccchhh
Confidence 246889999999999999999 5665 999999996 3456789999999999999999999999976 576554332
Q ss_pred hc------ccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHH
Q 046395 341 LS------FASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDY 414 (535)
Q Consensus 341 ~~------~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~ 414 (535)
.. ..++.+|+||++|+|.... .+. +.+.. .+..+. .++.|+||||||+....+..
T Consensus 192 ~~~~~~~~~~dp~~nlvys~H~Y~~~g-----~~~----~~~~~----~~~~~~-~~g~Pv~igEfG~~~~~~~~----- 252 (345)
T 3jug_A 192 HDYGQDVFNADPLKNTIFSIHMYEYAG-----GDA----NTVRS----NIDRVI-DQDLALVIGEFGHRHTDGDV----- 252 (345)
T ss_dssp HHHHHHHHHTCTTCCEEEEEEESTTTT-----SSH----HHHHH----HHHHHH-TTTCCEEEEEECCCCCC--C-----
T ss_pred ccchhhhcccCCccceEEEEEecCCCC-----CCH----HHHHH----HHHHHH-HcCCcEEEECcCCCCCCCCH-----
Confidence 11 1234689999999995321 111 22222 233333 34556999999986532211
Q ss_pred HHHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCCccc-cccccccccccCc
Q 046395 415 QRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSS-LHWQTQVTHIFSS 469 (535)
Q Consensus 415 ~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~-~~W~~~~~~~~~~ 469 (535)
.++.+++.+++++++|++|+|+...+. .. +++..+..+ ...++.++.+...
T Consensus 253 --~~~~~l~~~~~~~i~w~~W~~~~~~~~-~~-~l~~~~~w~~~~lt~~G~~v~~~ 304 (345)
T 3jug_A 253 --DEDTILSYSEETGTGWLAWSWKGNSAE-WD-YLDLSEDWAGNHLTDWGNRIVHG 304 (345)
T ss_dssp --CHHHHHHHHHHHTCEEEESCSSCCCGG-GG-GGCSBSSTTSSSBCHHHHHHHHS
T ss_pred --HHHHHHHHHHHcCCEEEEEEEECCCCC-cc-cccccCCCCccCcChhhhhheeC
Confidence 245677888889999999999986442 22 233322111 1235566665544
|
| >1wky_A Endo-beta-1,4-mannanase; TIM barrel, catalytic domain, CBM, hydrolase; 1.65A {Bacillus SP} SCOP: b.18.1.31 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=270.95 Aligned_cols=247 Identities=13% Similarity=0.174 Sum_probs=173.4
Q ss_pred hCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCC
Q 046395 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGS 256 (535)
Q Consensus 177 w~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~ 256 (535)
|....+++||+.||++|+|+||||+.. +.+|.++.++.||++|++|.++||+||||+|..++.++
T Consensus 36 W~~~~~~~di~~ik~~G~N~VRipv~~--------g~~~~~~~l~~ld~vv~~a~~~Gl~VIlDlH~~~g~~~------- 100 (464)
T 1wky_A 36 WYKDQATTAIEGIANTGANTVRIVLSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYDS------- 100 (464)
T ss_dssp GCGGGHHHHHHHHHTTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCCC-------
T ss_pred cCCcchHHHHHHHHHCCCCEEEEEcCC--------CCccCHHHHHHHHHHHHHHHHCCCEEEEEecCCCCCCC-------
Confidence 434446899999999999999999962 22366678999999999999999999999998765321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCCC-CcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-CCC
Q 046395 257 RDGFQEWSDSDIQETVAIIDFLASRYADH-PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-RLG 334 (535)
Q Consensus 257 ~~~~~~W~~~~~~~~~~~~~~la~ry~~~-p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~~g 334 (535)
....+++.++|++||+||+++ +.| +|||+|||... .+...|..++++++++||+.+|+++|++++ .|+
T Consensus 101 --------~~~~~~~~~~w~~iA~ryk~~~~~V-i~eL~NEP~~~-~~~~~w~~~~~~~i~aIR~~dp~~~I~v~g~~w~ 170 (464)
T 1wky_A 101 --------IASLNRAVDYWIEMRSALIGKEDTV-IINIANEWFGS-WDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWG 170 (464)
T ss_dssp --------HHHHHHHHHHHHHTGGGTTTCTTTE-EEECCTTCCCS-SCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTT
T ss_pred --------hHHHHHHHHHHHHHHHHHcCCCCeE-EEEeccCCCCC-CCHHHHHHHHHHHHHHHHhcCCCCEEEEcCCCcC
Confidence 257889999999999999999 556 69999999963 456679999999999999999999999975 354
Q ss_pred CChh-------hhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC
Q 046395 335 GEWS-------ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE 407 (535)
Q Consensus 335 ~~~~-------~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~ 407 (535)
.... .+. ...+.++++|++|+|.++.. +.+.+.. .+..+.+ .+.|+||||||+.....
T Consensus 171 ~~~~~~~~~~~~l~-~~dp~~niv~s~H~Y~~~g~---------~~~~i~~----~~~~~~~-~g~Pv~igEfG~~~~~~ 235 (464)
T 1wky_A 171 QFPQSIHDYGREVF-NADPQRNTMFSIHMYEYAGG---------NASQVRT----NIDRVLN-QDLALVIGEFGHRHTNG 235 (464)
T ss_dssp TBTHHHHHHHHHHH-HTCTTCCEEEEEEESTTTSS---------SHHHHHH----HHHHHHT-TTCCEEEEEECSEETTE
T ss_pred cccccccccchhcc-ccCCCCCEEEEEEEECCCCC---------CHHHHHH----HHHHHHH-cCCCEEEECccCCCCCC
Confidence 3211 121 11335799999999975421 1122222 2223333 35569999999864321
Q ss_pred CCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCCCCCce-eccCCCccccccccccccccCcCCC
Q 046395 408 GASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKAL-TLSSSTLSSLHWQTQVTHIFSSLNE 472 (535)
Q Consensus 408 ~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~-~l~~~~~~~~~W~~~~~~~~~~l~~ 472 (535)
... .+.+++.++++++||++|+|+...++...+ ....|+.. ..++.++.++..++.
T Consensus 236 ~~~-------~~~~~~~~~~~~igw~~W~~~~~~~~~~~l~~~~~w~~~--~lt~~G~~~~~~~~g 292 (464)
T 1wky_A 236 DVD-------ESTIMSYSEQRGVGWLAWSWKGNGPEWEYLDLSNDWAGN--NLTAWGNTIVNGPYG 292 (464)
T ss_dssp ECC-------HHHHHHHHHHTTCEEEESCSSCCCGGGGGGCSBSSTTSS--SBCHHHHHHHHSTTS
T ss_pred cHH-------HHHHHHHHHHcCCeEEEEEEcCCCCCcccccccccCCcc--ccCHHHHHHHhhccc
Confidence 111 245567778889999999999875542221 11222221 133566777766653
|
| >1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.5e-30 Score=258.38 Aligned_cols=217 Identities=16% Similarity=0.282 Sum_probs=158.6
Q ss_pred HHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 046395 184 EDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEW 263 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W 263 (535)
++|+.||++|+|+||||+.+.. .|....++.||++|++|.++||+||||+|..++.++. + .
T Consensus 36 ~~~~~lk~~G~N~VRi~~~~~~--------~w~~~~~~~ld~~v~~a~~~Gi~Vild~h~~~~~~~~---~----~---- 96 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLSNGV--------RWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQ---S----G---- 96 (302)
T ss_dssp THHHHHHHTTCSEEEEEECCSS--------SSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTS---T----T----
T ss_pred HHHHHHHHcCCCEEEEEccCCc--------ccCCCCHHHHHHHHHHHHHCCCEEEEEeccCCCCCCC---C----c----
Confidence 8999999999999999997521 1333357999999999999999999999988765432 0 0
Q ss_pred ChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCCCcEEEEcC-CCCCChhh--
Q 046395 264 SDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK-LDSLKTYYKAGYDTVRKYSSSAYVILSN-RLGGEWSE-- 339 (535)
Q Consensus 264 ~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~~g~~~~~-- 339 (535)
+...+++.++|++|++||+++|.|++|||+|||...... ...|..++++++++||+.+|+++|++++ .|+.++..
T Consensus 97 -~~~~~~~~~~w~~ia~~~k~~~~vv~~el~NEP~~~~~~~~~~w~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~ 175 (302)
T 1bqc_A 97 -ASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTM 175 (302)
T ss_dssp -CCCHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCHH
T ss_pred -hhhHHHHHHHHHHHHHHhcCCCCEEEEEeCCCCCCCCCcchhhHHHHHHHHHHHHHhcCCCcEEEECCCccccCchhhh
Confidence 246789999999999999999999999999999863211 1248899999999999999999999875 46544422
Q ss_pred ------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHH
Q 046395 340 ------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRD 413 (535)
Q Consensus 340 ------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~ 413 (535)
+.. ....++++|++|.|.++.. . + .+.. .+..+.+. +.|++|||||+....+...
T Consensus 176 ~~~~~~~~~-~~~~~~~v~s~H~Y~~~~~------~-~---~~~~----~~~~~~~~-~~Pv~igEfG~~~~~~~~~--- 236 (302)
T 1bqc_A 176 RNNADQVYA-SDPTGNTVFSIHMYGVYSQ------A-S---TITS----YLEHFVNA-GLPLIIGEFGHDHSDGNPD--- 236 (302)
T ss_dssp HHHHHHHHH-TCTTCCEEEEEEESGGGCS------H-H---HHHH----HHHHHHHH-TCCEEEEEECCTTSTTCCC---
T ss_pred hccchhccc-cCCCCCEEEEEEEccCCCC------H-H---HHHH----HHHHHHHC-CCCEEEEeecCCCCCCchH---
Confidence 221 1345789999999987531 1 1 1221 12222233 4469999999875432211
Q ss_pred HHHHHHHHHHHHhhCCcceEEEeeeeCCCC
Q 046395 414 YQRFAEAQLDVYGRATFGWAYWAYKFAESP 443 (535)
Q Consensus 414 ~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~ 443 (535)
++..++.++++++||++|+|+...++
T Consensus 237 ----~~~~~~~~~~~~i~~~~W~~~~~~~~ 262 (302)
T 1bqc_A 237 ----EDTIMAEAERLKLGYIGWSWSGNGGG 262 (302)
T ss_dssp ----HHHHHHHHHHHTCEEEESCSSCCCTT
T ss_pred ----HHHHHHHHHHcCCEEEEeeccCCCCC
Confidence 34456777778899999999986543
|
| >2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.95 E-value=7.5e-28 Score=259.99 Aligned_cols=224 Identities=17% Similarity=0.227 Sum_probs=154.7
Q ss_pred hhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCcc-chHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC
Q 046395 176 HWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVG-GSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS 254 (535)
Q Consensus 176 hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~-~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s 254 (535)
||..+++++||+.||++|+|+||||+.||...-+.++ ..++ ..+++||++|++|.++||+||||+|.. .+++
T Consensus 35 ~w~~~~~~~d~~~i~~~G~N~VRipv~~~~~~~~~~~-~~~~~~~l~~ld~vv~~a~~~Gl~VIlD~H~~--~~~~---- 107 (491)
T 2y8k_A 35 EWTAAAPYDQIARVKELGFNAVHLYAECFDPRYPAPG-SKAPGYAVNEIDKIVERTRELGLYLVITIGNG--ANNG---- 107 (491)
T ss_dssp SSSCCCCHHHHGGGGGGTCCEEEEEEEECCTTTTSTT-CCCTTTTHHHHHHHHHHHHHHTCEEEEEEECT--TCTT----
T ss_pred CcCCCCCHHHHHHHHHcCCCEEEECceeecccccCCC-ccChhHHHHHHHHHHHHHHHCCCEEEEECCCC--CCCc----
Confidence 4666678999999999999999999998752111121 1333 269999999999999999999999973 1110
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC-CCh------HHHHHHHHHHHHHHHhcCCCcEE
Q 046395 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD-LKL------DSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 255 g~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~-~~~------~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
..+.++++++|++||+||+++|+|+ |||+|||.... ... ..|..++++++++||+++|+++|
T Consensus 108 ----------~~~~~~~~~~w~~iA~ryk~~p~Vi-~el~NEP~~w~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I 176 (491)
T 2y8k_A 108 ----------NHNAQWARDFWKFYAPRYAKETHVL-YEIHNEPVAWGPPYSSSTANPPGAVDMEIDVYRIIRTYAPETPV 176 (491)
T ss_dssp ----------CCCHHHHHHHHHHHHHHHTTCTTEE-EECCSSCSSSCSCTTSTTSSSTTHHHHHHHHHHHHHHHCTTSCE
T ss_pred ----------cccHHHHHHHHHHHHHHhCCCCceE-EEeecCCCCCCCccccccccHHHHHHHHHHHHHHHHhhCCCcEE
Confidence 0246899999999999999999998 99999997521 111 23999999999999999999999
Q ss_pred EEcCC--CC--CCh----hhhh--------cccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcC
Q 046395 328 ILSNR--LG--GEW----SELL--------SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD 391 (535)
Q Consensus 328 i~~~~--~g--~~~----~~~~--------~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~ 391 (535)
++++. ++ .++ ..+. ..+....+++|++|.|.+.. ..+. .+..+.+ .
T Consensus 177 ~v~g~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~n~v~s~H~Y~~~~-------------~~~~----~l~~~~~-~ 238 (491)
T 2y8k_A 177 LLFSYAVFGGKGGAAEALKDIRAFNKAVFGNENAVWTNEAVAFHGYAGWQ-------------ETTI----AVEELLK-A 238 (491)
T ss_dssp EEEEESCCCHHHHHHHHHHHHHHHHHHHHSSTTCCCSSEEEEEESTTCHH-------------HHHH----HHHHHHH-T
T ss_pred EEecccccCCCcccchhhcccccccccccccCCCCCCceeEEEeeCCCCc-------------ccHH----HHHHHHH-c
Confidence 98641 10 011 1111 01124578999999997631 1121 2233333 3
Q ss_pred CCcEEEeccCCCc-CCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCC
Q 046395 392 GPLSFVGEWSCEW-EAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAE 441 (535)
Q Consensus 392 ~p~v~vGEfg~~~-~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~ 441 (535)
+.|+||||||... ...... +..+.++.++++++||++|+|++..
T Consensus 239 g~Pv~igEfG~~~~~~~~~~------~~~~~~~~~~~~~i~w~~W~~~~~~ 283 (491)
T 2y8k_A 239 GYPCFMTEYAGGAWGSGMGG------LDVELTYELERLGVSWLTFQYIPPT 283 (491)
T ss_dssp TCCEEEEECCCC--CCSCSS------CCHHHHHHHHHHTCEEEEEEECTTC
T ss_pred CCCEEEEeecccccCCCCcc------hhHHHHHHHHhcCcceEEEeccCCC
Confidence 5569999999653 211111 1112346677788999999998654
|
| >3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.1e-26 Score=239.44 Aligned_cols=248 Identities=17% Similarity=0.232 Sum_probs=170.2
Q ss_pred HHHHHHHHHcCCCEEEeCCcc---------ccccCCCCCCCCc--------cchHHHHHHHHHHHHHcCCEEEEecCCC-
Q 046395 183 EEDFKFMSQNGLNAVRIPVGW---------WIAYDPKPPKPFV--------GGSLQALDNAFRWAQKYGMKVIVDLHAL- 244 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~---------w~~~~p~~~~~~~--------~~~l~~ld~~i~~a~~~Gi~VIldlH~~- 244 (535)
+++|+.||++|+|+||+.+.+ |..++|.++. |+ +..|+.||++|++|+++||+|||+||..
T Consensus 46 ~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~-yd~~~~~~~~~~~~~~LD~~i~~A~k~GI~viL~l~~~w 124 (383)
T 3pzg_A 46 DSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGV-FGVPEGISNAQNGFERLDYTIAKAKELGIKLIIVLVNNW 124 (383)
T ss_dssp HHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTB-CSSCTTCSSCEEHHHHHHHHHHHHHHHTCEEEEECCBSS
T ss_pred HHHHHHHHHcCCCEEEEeccccccccccccccccccCCCc-ccccccccchHHHHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 799999999999999998875 5567887765 77 7889999999999999999999999962
Q ss_pred --CCCCCCC-CCCCCCCCCCCCC-hHHHHHHHHHHHHHHHH--------hCCCCcEEEEEeecCCCCCC-CChHHHHHHH
Q 046395 245 --RVSQNGS-PHSGSRDGFQEWS-DSDIQETVAIIDFLASR--------YADHPSLVAIELMNEPKAPD-LKLDSLKTYY 311 (535)
Q Consensus 245 --pg~~ng~-~~sg~~~~~~~W~-~~~~~~~~~~~~~la~r--------y~~~p~V~~~el~NEP~~~~-~~~~~~~~~~ 311 (535)
.|+...+ ...+.......|. +..++.++++++.|++| |+++|+|++|+|.|||.+.. .+.+.++.|+
T Consensus 125 ~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~tG~~y~~~p~I~~w~l~NEp~~~~~~~~~~~~~w~ 204 (383)
T 3pzg_A 125 DDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYTGVPYREEPTIMAWELANELRCETDKSGNTLVEWV 204 (383)
T ss_dssp STTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBTCCCTTCTTSHHHHHHH
T ss_pred cccCCccchhhhcCCCccccccCCHHHHHHHHHHHHHHHhhhccccCcccCCCCcEEEEEecCCCCcccCccHHHHHHHH
Confidence 2221110 0011111111222 77899999999999999 99999999999999998743 2357899999
Q ss_pred HHHHHHHHhcCCCcEEEEcC--CCC-C----------Chh-------hhhcccCCCCcEEEEEeecCcCCCcccCCChhh
Q 046395 312 KAGYDTVRKYSSSAYVILSN--RLG-G----------EWS-------ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQ 371 (535)
Q Consensus 312 ~~~~~aIR~~~p~~~ii~~~--~~g-~----------~~~-------~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~ 371 (535)
++++++||+++|+++|+++. .++ + ++. .+........-.++++|.|+..+. .+.+.
T Consensus 205 ~~~~~~IR~~Dp~~lVt~G~~g~~~~~~~~~~~~~~~~~~~~~~~g~df~~~~~~~~iD~~t~H~Yp~~w~----~~~~~ 280 (383)
T 3pzg_A 205 KEMSSYIKSLDPNHLVAVGDEGFFSNYEGFKPYGGEAEWAYNGWSGVDWKKLLSIETVDFGTFHLYPSHWG----VSPEN 280 (383)
T ss_dssp HHHHHHHHHHCSSSEEECCCCCCCBCCTTCCCGGGTTGGGTBTTTSCCHHHHHTCTTCCSEEEEECHHHHT----CCGGG
T ss_pred HHHHHHHHhhCCCceEEEcccccccccccccccCCCCccccccccCCChHhhcCCCCCCEEEEEecccccC----cChHH
Confidence 99999999999999998874 221 0 010 011111122345899999975321 23333
Q ss_pred hHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHH-HHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 372 NIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKR-DYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 372 ~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~-~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
.+++....+.++++...+. ++|++|+|||...... ..++ .+..|++. +++..++|++||+|...
T Consensus 281 ~~~~~~~wi~~h~~~a~~~-gKPvv~eEfG~~~~~~-~~r~~~~~~~~~~---~~~~~~~g~~~Wq~~~~ 345 (383)
T 3pzg_A 281 YAQWGAKWIEDHIKIAKEI-GKPVVLEEYGIPKSAP-VNRTAIYRLWNDL---VYDLGGDGAMFWMLAGI 345 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHH-TCCEEEEEECCCTTSS-SCHHHHHHHHHHH---HHHTTCCEEEESCBCCB
T ss_pred HHHHHHHHHHHHHHHHHhc-CCCEEEEecCCCCCCh-hHHHHHHHHHHHH---HHHhCCcceEEEEecCc
Confidence 3444444444445444443 5569999999865422 2333 34555543 33446789999999875
|
| >1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-26 Score=237.82 Aligned_cols=259 Identities=14% Similarity=0.167 Sum_probs=165.5
Q ss_pred ccchHHHHHHHHHcCCCEEEeCCcc---ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC---CCCCCCC-
Q 046395 179 SYITEEDFKFMSQNGLNAVRIPVGW---WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL---RVSQNGS- 251 (535)
Q Consensus 179 ~~ite~D~~~ik~~G~N~VRipv~~---w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~---pg~~ng~- 251 (535)
....++||+.||++|+|+||+++.. |..++|.++. |+++.++.||++|++|.++||+|||+||+. .|+....
T Consensus 41 ~~~~~~dl~~~k~~G~N~vR~~~~~~~~w~~~~~~~g~-~~~~~~~~ld~~i~~a~~~Gi~vil~l~~~~~~~gg~~~~~ 119 (373)
T 1rh9_A 41 RIKVTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGV-YNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYV 119 (373)
T ss_dssp THHHHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTE-ECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEECeecCCCCccccCCCCc-cCHHHHHHHHHHHHHHHHCCCEEEEEecccccccCChHHHH
Confidence 3445899999999999999998642 5556666654 888899999999999999999999999963 1211000
Q ss_pred --C-CCCCC--CCCCCCC-hHHHHHHHHHHHHHHHH--------hCCCCcEEEEEeecCCCCCCC-ChHHHHHHHHHHHH
Q 046395 252 --P-HSGSR--DGFQEWS-DSDIQETVAIIDFLASR--------YADHPSLVAIELMNEPKAPDL-KLDSLKTYYKAGYD 316 (535)
Q Consensus 252 --~-~sg~~--~~~~~W~-~~~~~~~~~~~~~la~r--------y~~~p~V~~~el~NEP~~~~~-~~~~~~~~~~~~~~ 316 (535)
. ..|.. .....|. +..++.+.++++.|++| |+++|+|++|+|+|||..... +.+.+..|++++++
T Consensus 120 ~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~r~n~~tg~~y~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~ 199 (373)
T 1rh9_A 120 EWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAG 199 (373)
T ss_dssp HHHHHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHH
T ss_pred HHHhhcCCCCCchhhcccCHHHHHHHHHHHHHHHhccCccCCccccCCCcEEEEeeccCcCccCCCCHHHHHHHHHHHHH
Confidence 0 00100 0112343 78899999999999999 999999999999999997422 34789999999999
Q ss_pred HHHhcCCCcEEEEcCC--CCC-----Chhhh---hcc---cCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHH
Q 046395 317 TVRKYSSSAYVILSNR--LGG-----EWSEL---LSF---ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSD 383 (535)
Q Consensus 317 aIR~~~p~~~ii~~~~--~g~-----~~~~~---~~~---~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~ 383 (535)
+||+++|+++|+++.. ++. +...+ .++ .......++++|.|...+. ...+.+.............
T Consensus 200 ~ir~~dp~~~v~~g~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~~s~H~Y~~~~~--~~~~~~~~~~~~~~~l~~~ 277 (373)
T 1rh9_A 200 YLKSIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWL--PGLTQEAQDKWASQWIQVH 277 (373)
T ss_dssp HHHHHCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTSTTCCCEEEECCHHHHS--TTSCHHHHHHHHHHHHHHH
T ss_pred HHHhhCCCceEEeCcccccCCCCCcCCccccccccchhhhccCCCcCeEEEeeCCcccC--CCCCHHHHHHHHHHHHHHH
Confidence 9999999999887532 211 11111 010 0122345899999974211 1112222222222212222
Q ss_pred HHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHH----HHHHHHHHhhC--CcceEEEeeeeCC
Q 046395 384 LRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRF----AEAQLDVYGRA--TFGWAYWAYKFAE 441 (535)
Q Consensus 384 l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~----~~~ql~~~~~~--~~Gw~~W~~k~~~ 441 (535)
+....+. +.|++|+|||......+.+.....+| ++.+.+.+.+. ..|++||+|+...
T Consensus 278 ~~~~~~~-~kP~~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 340 (373)
T 1rh9_A 278 IDDSKML-KKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQG 340 (373)
T ss_dssp HHHHHHH-TSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCTT
T ss_pred HHHHHhc-CCCEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCceeEeeeecCCCC
Confidence 2222223 45699999998654322233333333 33444444432 4799999998864
|
| >1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=237.57 Aligned_cols=252 Identities=13% Similarity=0.204 Sum_probs=161.4
Q ss_pred hHHHHHHHHHcCCCEEEeC-------Ccc--ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIP-------VGW--WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSP 252 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRip-------v~~--w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~ 252 (535)
.++||+.||++|+|+||++ +.| |..+++.++. |+++.++.||++|++|.++||+|||+||.. +.
T Consensus 64 ~~~dl~~~k~~G~N~vR~~~~d~~~~~~~~~~~~~~~~~g~-~~e~~~~~lD~~l~~a~~~Gi~vil~l~~~------~~ 136 (440)
T 1uuq_A 64 LAKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGN-YDETLLQGLDYLLVELAKRDMTVVLYFNNF------WQ 136 (440)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTC-BCHHHHHHHHHHHHHHHHTTCEEEEECCBS------SS
T ss_pred HHHHHHHHHHcCCCEEEECcccCCCCCcccccccccCCCCc-cCHHHHHHHHHHHHHHHHCCCEEEEEcccc------cc
Confidence 4899999999999999997 322 4456666664 888999999999999999999999999942 11
Q ss_pred CCCCC------------------CC--------CCCCC-hHHHHHHHHHHHHHHHH--------hCCCCcEEEEEeecCC
Q 046395 253 HSGSR------------------DG--------FQEWS-DSDIQETVAIIDFLASR--------YADHPSLVAIELMNEP 297 (535)
Q Consensus 253 ~sg~~------------------~~--------~~~W~-~~~~~~~~~~~~~la~r--------y~~~p~V~~~el~NEP 297 (535)
.+|.. .+ ...|. +..++.+.++|+.|++| |+++|+|++|+|.|||
T Consensus 137 ~~Gg~~~~~~w~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~R~N~~tg~~ykn~P~Ii~w~l~NEp 216 (440)
T 1uuq_A 137 WSGGMTQYMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEP 216 (440)
T ss_dssp TTCHHHHHHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSC
T ss_pred ccCCchhhHHHhccCCCCCCcccccccchhhhhhhhccCHHHHHHHHHHHHHHHhccCCcCCcccCCCCceEEEeeccCc
Confidence 11100 00 11233 67788999999999999 9999999999999999
Q ss_pred CCCCC-----ChHHHHHHHHHHHHHHHhcCCCcEEEEcCC--CC--CChhhhhcccCCCCcEEEEEeecCcCCCcccCCC
Q 046395 298 KAPDL-----KLDSLKTYYKAGYDTVRKYSSSAYVILSNR--LG--GEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMS 368 (535)
Q Consensus 298 ~~~~~-----~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~--~g--~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~ 368 (535)
..... +...+..|+++++++||++||+++|+++.. ++ .+...+........-.++++|.|...+.......
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~Dp~~lV~~g~~g~~~~~~~~~~~~~~~~~~~iD~~s~H~Y~~~w~~~~~~~ 296 (440)
T 1uuq_A 217 RPGNSQTTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTK 296 (440)
T ss_dssp CSCSTTCCHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTS
T ss_pred ccccCcccccchHHHHHHHHHHHHHHHhhCCCCeEEECCccccCCCCcchhhHHhccCCCCCEEEEEeCCCccccCCCcc
Confidence 87421 346789999999999999999999888642 22 1111221111122345899999975432111111
Q ss_pred hhhhH----HHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC----CCCHHHHHHHHHHH----HHHHhhC--CcceEE
Q 046395 369 VQQNI----DYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE----GASKRDYQRFAEAQ----LDVYGRA--TFGWAY 434 (535)
Q Consensus 369 ~~~~i----~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~----~~~~~~~~~~~~~q----l~~~~~~--~~Gw~~ 434 (535)
..... ..+.......+....+. +.|++|+|||...... +.+.....+|++.. .+...+. ..|++|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~a~~~-~kPvil~EfG~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~ 375 (440)
T 1uuq_A 297 PAETWPSAWEKAQNYMRAHIDVAKQL-NKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNI 375 (440)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEE
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHh-CCCEEEEeCCCCCCCCccCcCCChHHHHHHHHHHHHHHHHHHHhCCCceeEEE
Confidence 11111 11111111222222222 4569999999865311 11222333444433 3333222 379999
Q ss_pred EeeeeCC
Q 046395 435 WAYKFAE 441 (535)
Q Consensus 435 W~~k~~~ 441 (535)
|+|....
T Consensus 376 W~~~d~~ 382 (440)
T 1uuq_A 376 WAWNGYG 382 (440)
T ss_dssp SCEEETC
T ss_pred eeecCCC
Confidence 9998753
|
| >1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4e-24 Score=219.89 Aligned_cols=242 Identities=17% Similarity=0.216 Sum_probs=154.5
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCC---------CCC--CCCc--cchHHHHHHHHHHHHHcCCEEEEecCCC---C
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDP---------KPP--KPFV--GGSLQALDNAFRWAQKYGMKVIVDLHAL---R 245 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p---------~~~--~~~~--~~~l~~ld~~i~~a~~~Gi~VIldlH~~---p 245 (535)
.++||+.||++|+|+||+++.++....| .++ ..++ +..++.||++|++|.++||+||||+|.. +
T Consensus 38 ~~~~l~~~k~~G~N~vR~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~i~~a~~~Gi~vild~~~~w~~~ 117 (344)
T 1qnr_A 38 VDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDY 117 (344)
T ss_dssp HHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTT
T ss_pred HHHHHHHHHHcCCCEEEEccccCCCCCCCCCceeeeecCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEEEeccCcccc
Confidence 4899999999999999998765431112 111 1243 5679999999999999999999999953 1
Q ss_pred CCCCCC-CCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 046395 246 VSQNGS-PHSGSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 246 g~~ng~-~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p 323 (535)
|+...+ ...+.. ....|. +..++.+.++|+.|++||+++|+|++|+|.|||.....+.+.+..|+++++++||+++|
T Consensus 118 g~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~w~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~dp 196 (344)
T 1qnr_A 118 GGINAYVNAFGGN-ATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDS 196 (344)
T ss_dssp SHHHHHHHHHCSC-TTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCS
T ss_pred CCHHHHHHHhCCC-hhhhcCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEcccCcccCCCChHHHHHHHHHHHHHHHhcCC
Confidence 111000 000100 112233 67889999999999999999999999999999987544567899999999999999999
Q ss_pred CcEEEEcC-CCCCC-----hh-------hhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhc
Q 046395 324 SAYVILSN-RLGGE-----WS-------ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTS 390 (535)
Q Consensus 324 ~~~ii~~~-~~g~~-----~~-------~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~ 390 (535)
+++|+++. .++.+ .. .+..........++++|.|...+.. ........+... +.... .
T Consensus 197 ~~~v~~g~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~D~~s~h~Y~~~~~~----~~~~~~~~~~~~----~~~~~-~ 267 (344)
T 1qnr_A 197 NHLVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGT----NYTWGNGWIQTH----AAACL-A 267 (344)
T ss_dssp SSEEECCCCCCCCTTSCCCGGGSSSSSCCHHHHHTCTTCCSEEEEECHHHHTC----CSTHHHHHHHHH----HHHHH-H
T ss_pred CCEEEECCccccCCCCCccCCccccccCcHHHHhCCCCCCeEEeeeCCCccCc----cchHHHHHHHHH----HHHHH-H
Confidence 99988853 23111 00 0100001223458999999742111 011111222211 11122 2
Q ss_pred CCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCC-cceEEEeeeeC
Q 046395 391 DGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRAT-FGWAYWAYKFA 440 (535)
Q Consensus 391 ~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~-~Gw~~W~~k~~ 440 (535)
.+.|++|+|||..... ......|++.. ....+ .|+++|+|...
T Consensus 268 ~~kPv~l~E~G~~~~~----~~~~~~~~~~~---~~~~~~~g~~~W~~~d~ 311 (344)
T 1qnr_A 268 AGKPCVFEEYGAQQNP----CTNEAPWQTTS---LTTRGMGGDMFWQWGDT 311 (344)
T ss_dssp TTSCEEEEEECCSSCH----HHHHHHHHHHH---HTSTTEEEEEESCEECB
T ss_pred cCCCEEEeecCCCCCC----CchHHHHHHHH---HhcCCCCceEEEeccCC
Confidence 3456999999976531 12234454432 22234 49999999774
|
| >2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-24 Score=220.88 Aligned_cols=232 Identities=13% Similarity=0.093 Sum_probs=147.9
Q ss_pred chHHHHHHHHHcCCCEEEeCCccccccCC---CCCCC--CccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC-
Q 046395 181 ITEEDFKFMSQNGLNAVRIPVGWWIAYDP---KPPKP--FVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS- 254 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv~~w~~~~p---~~~~~--~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s- 254 (535)
.+++||+.||++|+|+||+++.++...+| .++.. .++..++.+|++|++|.++||+|||++|.. +...
T Consensus 46 ~~~~d~~~~k~~G~N~vR~~~~~~~~~~p~~~~~g~~~~~~~~~~~~ld~~~~~a~~~Gi~vil~l~~~------~~~~~ 119 (353)
T 2c0h_A 46 TFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNG------AVKQS 119 (353)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEEC------SCCCT
T ss_pred HHHHHHHHHHHcCCCEEEEceecCCccCccccCCCccccCCHHHHHHHHHHHHHHHHcCCEEEEEccCc------cccCC
Confidence 45899999999999999999988755444 22211 123589999999999999999999999641 1111
Q ss_pred CCCC-CCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC---------------------------CChH
Q 046395 255 GSRD-GFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD---------------------------LKLD 305 (535)
Q Consensus 255 g~~~-~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~---------------------------~~~~ 305 (535)
+... ...... +...+.+.++|+.|++||+++|+|++|+|+|||.... ...+
T Consensus 120 g~~~~~~~~~~~~~~~~~~~~~~~~~a~ry~~~p~i~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 199 (353)
T 2c0h_A 120 THYRLNGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQ 199 (353)
T ss_dssp THHHHHHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHH
T ss_pred CcccccceEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccCCCCCccccccCCCccccccccccccccccccccCcHH
Confidence 1000 000011 1233344577799999999999999999999998630 1227
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEcCC--CC-CChhhhhcc----------cCCCCcE-EEEEeecCcCCCcccCCChhh
Q 046395 306 SLKTYYKAGYDTVRKYSSSAYVILSNR--LG-GEWSELLSF----------ASNLSRV-VIDVHFYNLFWDNFNKMSVQQ 371 (535)
Q Consensus 306 ~~~~~~~~~~~aIR~~~p~~~ii~~~~--~g-~~~~~~~~~----------~~~~~n~-v~d~H~Y~~~~~~~~~~~~~~ 371 (535)
.+..++++++++||+++|+++|+++.. +. .+....... ....+++ ++++|+|.+... +.....
T Consensus 200 ~~~~~~~~~~~~Ir~~dp~~~V~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~D~~s~H~Y~~~~~-~~~~~~-- 276 (353)
T 2c0h_A 200 EIGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNH-FGNESP-- 276 (353)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTB-CCTTCT--
T ss_pred HHHHHHHHHHHHHHhhCCCCeEEECCccccCCCcccCcCCCCcchhhhhhccccCCCCCEEEEeeCCCccc-ccccCc--
Confidence 899999999999999999999888631 21 110000000 0123455 999999975321 110000
Q ss_pred hHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCC-cceEEEeeee
Q 046395 372 NIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRAT-FGWAYWAYKF 439 (535)
Q Consensus 372 ~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~-~Gw~~W~~k~ 439 (535)
+. ..+..+ ..+.|++|+|||...... . ++...++.+.+.+ +||++|+|..
T Consensus 277 ---~~-----~~~~~~--~~~~P~~i~E~G~~~~~~-~-------~~~~~~~~~~~~g~~g~~~W~~~d 327 (353)
T 2c0h_A 277 ---FK-----HSFSNF--RLKKPMVIGEFNQEHGAG-M-------SSESMFEWAYTKGYSGAWTWSRTD 327 (353)
T ss_dssp ---TS-----SCGGGG--CCSSCEEEEECCGGGSTT-C-------CHHHHHHHHHHTTCSEEEESCSSS
T ss_pred ---cc-----chHHHh--cCCCCEEEEecCCCCCCC-c-------cHHHHHHHHHHCCCcEEEEEEEcC
Confidence 00 001111 124569999999865321 1 2233445555567 8999999987
|
| >3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-22 Score=202.67 Aligned_cols=235 Identities=16% Similarity=0.098 Sum_probs=147.7
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCC-------CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKP-------PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS 254 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~-------~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s 254 (535)
.++||+.||++|+|+||+|++++....|.. +..+.+..++.+|+++++|.++||+||||+|.......+....
T Consensus 44 ~~~~l~~~k~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~Gi~vil~~~~~~~~~~~~~~~ 123 (351)
T 3vup_A 44 IEPEFKKLHDAGGNSMRLWIHIQGETTPAFNDQGFVTGPDKQGTMLDDMKDLLDTAKKYNILVFPCLWNAAVNQDSHNRL 123 (351)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEESCSSSCHHHHHHHHHHHHHHTTCEEEEEEEECSSCCCGGGHH
T ss_pred HHHHHHHHHHcCCcEEEECcccccccCcccccccccccccccHHHHHHHHHHHHHHHHCCCeEEEEecccccccCCCCcc
Confidence 389999999999999999987643322211 1123456899999999999999999999999653322111000
Q ss_pred CCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC---------------------------CCChHH
Q 046395 255 GSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP---------------------------DLKLDS 306 (535)
Q Consensus 255 g~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~---------------------------~~~~~~ 306 (535)
...... +...+.+.++|+.|++||+++|+|++|+|.|||... ......
T Consensus 124 ----~~~~~~~~~~~~~~~~~~~~~v~r~kn~psi~~w~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (351)
T 3vup_A 124 ----DGLIKDQHKLQSYIDKALKPIVNHVKGHVALGGWDLMNEPEGMMIPDKHNAEKCYDTTALKNSGAGWAGNKYLYQD 199 (351)
T ss_dssp ----HHHHHCHHHHHHHHHHTHHHHHHHTTTCTTBCCEEEEECGGGGBCCSCCCSSGGGCCGGGTTSSTTTTCSCBCHHH
T ss_pred ----ccccCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEecccccccccccccccccccccchhhcccccccccccchhh
Confidence 000001 334556778899999999999999999999999642 123467
Q ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCC--CC-CCh--------hh---hhcccCCCCcEEEEEeecCcCCCcccCCChhhh
Q 046395 307 LKTYYKAGYDTVRKYSSSAYVILSNR--LG-GEW--------SE---LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQN 372 (535)
Q Consensus 307 ~~~~~~~~~~aIR~~~p~~~ii~~~~--~g-~~~--------~~---~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~ 372 (535)
+..|++++.++||+.+|+++|.++.. +. .+. .. ...........++++|.|..... +......
T Consensus 200 ~~~~~~~~~~~ik~~dp~~lv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~s~h~Y~~~~~-~~~~~~~-- 276 (351)
T 3vup_A 200 ILRFLNWQADAIKTTDPGALVTMGVWNPKSNTDHFNMNNHYSDHCLRLAGGKQKGVFDFYQFHSYSWQGK-WDEVAPF-- 276 (351)
T ss_dssp HHHHHHHHHHHHHHHSTTCCEEEEESSGGGSCSSTTCCCTTSHHHHHHHHCCTTCSCSSEEEECCCBTTB-CCTTCGG--
T ss_pred HHHHHHHHHHHhhccCCCCeeEecCcccccccCccccccccccccccccccccccccceeeeeccCcccc-cchhhhH--
Confidence 89999999999999999999887531 10 000 00 01111233456899999975322 1111110
Q ss_pred HHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 373 IDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 373 i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
.. . ......+.|++|||||....... ..+.+ ++ .+++....|.++|+|...
T Consensus 277 ---~~-~------~~~~~~~kPvii~Efg~~~~~~~-~~~~~---~~---~~~~~~~~G~~~W~~~d~ 327 (351)
T 3vup_A 277 ---TH-Q------ASDYGLHKPIVVGEFWEQDGGGM-TITQM---FN---YVYNHGYAGAWSWHLVQR 327 (351)
T ss_dssp ---GS-C------GGGGCCSSCEEEEECCGGGSTTC-CHHHH---HH---HHHHTTCSEEEEECHHHH
T ss_pred ---HH-H------HHhcCCCCcEEEEeCCCCCCCCc-CHHHH---HH---HHHhcCCeEEEEEeeecC
Confidence 00 0 01122345699999987643322 22222 22 223334569999999764
|
| >4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.8e-21 Score=194.78 Aligned_cols=249 Identities=15% Similarity=0.140 Sum_probs=150.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCC-----------------------CCCCccchHHHHHHHHHHHHHcCCEEEE
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKP-----------------------PKPFVGGSLQALDNAFRWAQKYGMKVIV 239 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~-----------------------~~~~~~~~l~~ld~~i~~a~~~Gi~VIl 239 (535)
+++|+.||++|+|+||+...+.....+.+ ...+.+..++.+|.++++|+++||+||+
T Consensus 40 ~~~l~~~~~~G~N~iR~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~v~~ 119 (387)
T 4awe_A 40 EKGMTAARAAGLTVFRTWGFNDKNRTYIPTGLPQYGNEGAGDPTNTVFQWFEADGTQTIDVSPFDKVVDSATKTGIKLIV 119 (387)
T ss_dssp HHHHHHHHHTTCCEEEEECCCEEESSCCTTCSSCCCCCTTCCTTCCCSEEECTTSCEEECCGGGHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhCCCCEEEeCcccCCCccCccccchhhhccccccccchhhhhcccCccchhhhhhHHHHHHHHHHcCCEEEE
Confidence 79999999999999999553321111000 0012234678899999999999999999
Q ss_pred ecCCCCCCCCCCCC----CCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC------------CC
Q 046395 240 DLHALRVSQNGSPH----SGSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP------------DL 302 (535)
Q Consensus 240 dlH~~pg~~ng~~~----sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~------------~~ 302 (535)
++|.......+... .+.......+. +..++.++++++.+++||+++|+|++|+|.|||... ..
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~k~~p~I~~w~l~NEp~~~~~~~~~~~~~~~~~ 199 (387)
T 4awe_A 120 ALTNNWADYGGMDVYTVNLGGKYHDDFYTVPKIKEAFKRYVKAMVTRYRDSEAILAWELANEARCGADGTRNLPRSEKGC 199 (387)
T ss_dssp ECCBSSSTTCCHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCSCCCTTTSCCCCSSSC
T ss_pred eecccccccCCCcccccccccccccccccCHHHHHHHHHHHHHHHhhcCCCcceeEeccCCCCCCCCCcccccccccccc
Confidence 99964322211100 00000011111 567889999999999999999999999999999863 12
Q ss_pred ChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-CC--CChhh-----------hhcccCCCCcEEEEEeecCcCCCcccCCC
Q 046395 303 KLDSLKTYYKAGYDTVRKYSSSAYVILSNR-LG--GEWSE-----------LLSFASNLSRVVIDVHFYNLFWDNFNKMS 368 (535)
Q Consensus 303 ~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g--~~~~~-----------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~ 368 (535)
..+.+..++++++++||++||+++|.++.. +. ..... .........-.++++|.|..... ..
T Consensus 200 ~~~~~~~~~~~~~~~ik~~Dp~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~y~~~~~----~~ 275 (387)
T 4awe_A 200 TTETVTGWIEEMSAYVKSLDGNHLVTWGGEGGFNRGEDEEDGFYNGADGGDFDRELGLRNVDFGTMHLYPDWWS----KS 275 (387)
T ss_dssp CHHHHHHHHHHHHHHHHHHCSSSEEECCCCCCCBCCC--CCTTTBTTTSCCHHHHHTCTTCCCEEEEECHHHHT----CC
T ss_pred chHHHHHHHHHHHHHHHHhCCCCcEEEcccccccCCCccccccccccccccchhcccCCccceeeecccccccc----hh
Confidence 457899999999999999999999988642 11 00000 00000123446899999964321 01
Q ss_pred hhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC---------CCCCHH-HHHHHHHHHHHHHhhCCcceEEEeee
Q 046395 369 VQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA---------EGASKR-DYQRFAEAQLDVYGRATFGWAYWAYK 438 (535)
Q Consensus 369 ~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~---------~~~~~~-~~~~~~~~ql~~~~~~~~Gw~~W~~k 438 (535)
.......+ ........ ..+.|++++|||..... ...... .+..|.. ........|++||+|.
T Consensus 276 ~~~~~~~~----~~~~~~~~-~~~kp~~~~E~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~G~~~W~~~ 347 (387)
T 4awe_A 276 IEWSNQWI----HDHAASGR-AANKPVVLEEYGWMTDKGRLDQLGQVKNETRLEVVGGWQK---IAIQEKLAGDMYWQFG 347 (387)
T ss_dssp HHHHHHHH----HHHHHHHH-HHTCCEEEEEECCCCHHHHHHHHSCCCCSCHHHHHHHHHH---HHHHHTCSEEEESCEE
T ss_pred hhhhHHHH----HHHHHHHH-hcCCCeeeccccccccCCCccchhhhhHHHHHHHHHHHHH---HHhCCCCeEEEEEEEc
Confidence 11111111 11111122 23456999999975321 111111 2223322 2334467899999999
Q ss_pred eCCCC
Q 046395 439 FAESP 443 (535)
Q Consensus 439 ~~~~~ 443 (535)
.+..+
T Consensus 348 ~~~~~ 352 (387)
T 4awe_A 348 YGGYS 352 (387)
T ss_dssp CSCBT
T ss_pred CCCCC
Confidence 87543
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-20 Score=199.58 Aligned_cols=148 Identities=23% Similarity=0.338 Sum_probs=124.3
Q ss_pred CCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecC-CeEEEEeeCCcEEEeecCCCeEEEeccCCCC
Q 046395 16 DGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINE-TFYNFRLSNKQFIGLENQGNKLVAVSATEKF 94 (535)
Q Consensus 16 ~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~ 94 (535)
.++||+|+|. +|+|||+++|| .|+|||+.+ ++||||+||++++ ++++||+.||+||++++ +++|+|++++++.
T Consensus 259 ~~~qVaL~s~-ngkyVsa~~gg--~l~An~~~~--~~~EtFql~~~~~~~~vaLRs~~GkYl~~~~-~g~v~a~~~~~g~ 332 (493)
T 3llp_A 259 SCAQVVLQAA-NERNVSTRQGM--DLSANQDEE--TDQETFQLEIDRDTKKCAFRTHTGKYWTLTA-TGGVQSTASSKNA 332 (493)
T ss_dssp CCCEEEEECT-TSCEEECC-CC--CCEEEESCC--SGGGCEEEEECTTTCCEEEECTTSCEEEECT-TSBEEEEESSCCG
T ss_pred CCCEEEEEec-CCcEEEecCCc--eEEeeCCCC--CCcEEEEEEEeCCCCEEEEEeCCCCEEEEeC-CCcEEeccCCCCC
Confidence 5799999987 99999999887 699999999 9999999999985 88999999999999998 7889999999999
Q ss_pred CCceEEEecCCCCceeEEEecCCceEEEecccEEecCCCCCCCcccCCcccceeccccc----ccccchhhhccChhhhh
Q 046395 95 PEPFQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVST----MHGEYQITNGYGPDKAA 170 (535)
Q Consensus 95 ~e~f~~~~~~~~~~~v~I~~~nG~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~----~~~e~~~~~~~G~~~a~ 170 (535)
+|+|+|+.+. ++|.|+++||+||+++.+..++|+.... .++..|.+..+++ +.+|| ..+|...+.
T Consensus 333 ~E~F~i~~~~---g~vaLkA~NGkyVsa~~~G~L~An~~~~-----g~~E~F~l~l~nrp~l~Lrg~~---G~vg~~~~~ 401 (493)
T 3llp_A 333 SCYFDIEWRD---RRITLRASNGKFVTSKKNGQLAASVETA-----GDSELFLMKLINRPIIVFRGEH---GFIGCRKVT 401 (493)
T ss_dssp GGCBEEEEET---TEEEEECTTSCEEEECTTSBEEEEESSC-----CGGGCBEEEECSCSEECCEETT---EEEEEC--C
T ss_pred cceEEEEeCC---CeEEEEeCCCCEEEEcCCCEEEEecCCC-----CCCeEEEEEECCCceEEEeccc---CcEEeccCc
Confidence 9999999874 5799999999999999777788877543 4457888776653 34454 455777778
Q ss_pred HhHHhhhCcc
Q 046395 171 KLMRDHWKSY 180 (535)
Q Consensus 171 ~~~~~hw~~~ 180 (535)
..|+.||+++
T Consensus 402 ~~l~~nr~~~ 411 (493)
T 3llp_A 402 GTLDANRSSY 411 (493)
T ss_dssp CBEEEEESSC
T ss_pred chhhcccccc
Confidence 8899999876
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-18 Score=158.63 Aligned_cols=120 Identities=15% Similarity=0.204 Sum_probs=101.4
Q ss_pred CCCCcCCCCCCCCCCCCceeEEEEeecCcEEEEecCCCceEEec----cCCCCCCCCceeEEEEecCCeEEEEeeCCcEE
Q 046395 1 MEPNMFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMAN----HNSSSTSSWQTFRLWRINETFYNFRLSNKQFI 76 (535)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~an----r~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v 76 (535)
|+|++|++|++ +++|++++ |+||+|+.+|...+-|+ |..+ ++||+|+|++++++.++||+.+|+|+
T Consensus 15 ~~~~~~~~i~g-----~~~i~~~~---~~y~~A~~~G~~t~~~~~~~~~~~~--~~~E~f~l~~~~~~~v~LRs~~GkYL 84 (155)
T 2yug_A 15 WTVSNFGEISG-----TIAIEMDK---GAYIHALDNGLFTLGAPHREVDEGP--SPPEQFTAVKLSDSRIALKSGYGKYL 84 (155)
T ss_dssp EECSSGGGCCE-----EEEEECSS---SCBEEECTTSCEEECCCCSSSSCCC--CTTTCEEEEECSSSCEEEEETTSCBE
T ss_pred EecCchhcCCC-----CEEEEeCC---CCEEEEEcCCcEEEccccccccCCC--CCcceEEEEECCCCEEEEEeCCCCEE
Confidence 58999999997 77777665 99999999873222223 6678 99999999999999999999999999
Q ss_pred EeecCCCeEEEeccCCCCCCceEEEecCCCCceeEEEecCCceEEEecccEEecCCCC
Q 046395 77 GLENQGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKG 134 (535)
Q Consensus 77 ~~~~~~~~~~a~~~~~~~~e~f~~~~~~~~~~~v~I~~~nG~flq~~~~~~v~a~~~~ 134 (535)
+++. +|.|+|++++|+.+|+|+++.. +. ++.|++.||+||.++....+.++...
T Consensus 85 s~~~-~G~v~a~a~~~g~~E~F~l~~~-~G--~~aLra~nG~yl~~~~~g~l~a~a~~ 138 (155)
T 2yug_A 85 GINS-DGLVVGRSDAIGPREQWEPVFQ-DG--KMALLASNSCFIRCNEAGDIEAKNKT 138 (155)
T ss_dssp EECS-SSBEEECCSSCCTTTBEEEECS-TT--CCEEEETTSCBEEECSSSCEEECCSC
T ss_pred EecC-CCcEEeccCCCCCCCEEEEEEE-CC--EEEEEeCCCCEEEEcCCCcEEEecCC
Confidence 9998 7789999999999999999998 33 58899999999999876667776543
|
| >2j78_A Beta-glucosidase A; family 1, hydrolase, inhibitor, glycosidase, polysaccharide degradation, transition state mimic, carbohydrate metabolism; HET: GOX; 1.65A {Thermotoga maritima} SCOP: c.1.8.4 PDB: 1oif_A* 1oim_A* 1oin_A* 1od0_A* 1w3j_A* 1uz1_A* 2cbv_A* 2ces_A* 2cet_A* 2j75_A* 2j77_A* 2cbu_A* 2j79_A* 2j7b_A* 2j7c_A* 2j7d_A* 2j7e_A* 2j7f_A* 2j7g_A* 2j7h_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-18 Score=183.97 Aligned_cols=186 Identities=17% Similarity=0.208 Sum_probs=133.9
Q ss_pred CceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
..|| -..-||++|.||+| +.+.||+|+..... .. ...++...+.|. +||+.+ ++|+++||++|+
T Consensus 30 ~~Fl----wG~Atsa~QiEGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~ 95 (468)
T 2j78_A 30 EGFL----WGVATASYQIEGSPLADGAGMSIWHTFSHT-PG---NVKNGDTGDVAC----DHYNRW--KEDIEIIEKLGV 95 (468)
T ss_dssp TTCE----EEEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTC
T ss_pred CCCE----EeeeCcHHHhcCCcCCCCCCCeeeEEeccc-CC---cccCCCCCcccc----cccccC--HHHHHHHHHcCC
Confidence 3566 33567889999999 45889999764321 11 112222334566 888777 999999999999
Q ss_pred CEEEeCCccccccCCC-CCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHH
Q 046395 195 NAVRIPVGWWIAYDPK-PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETV 272 (535)
Q Consensus 195 N~VRipv~~w~~~~p~-~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~ 272 (535)
|++|++|.| .++.|. ++ .+++..++.+|++|+.|.++||++||+||+.. .+........|. +...+.|.
T Consensus 96 ~~~R~si~W-~Ri~P~G~g-~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d-------~P~~l~~~ggw~~~~~~~~F~ 166 (468)
T 2j78_A 96 KAYRFSISW-PRILPEGTG-RVNQKGLDFYNRIIDTLLEKGITPFVTIYHWD-------LPFALQLKGGWANREIADWFA 166 (468)
T ss_dssp CEEEEECCH-HHHSTTSSS-CCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHTTTGGGSTTHHHHHH
T ss_pred CEEEeccCH-HHhCCCCCC-CcCHHHHHHHHHHHHHHHhcCCEEEEEccCCC-------CchhhhhcCCCCChHHHHHHH
Confidence 999999976 778887 54 48999999999999999999999999998641 110000112344 67899999
Q ss_pred HHHHHHHHHhCCCCcEEEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCcEE
Q 046395 273 AIIDFLASRYADHPSLVAIELMNEPKA------------PDLK-L-------DSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 273 ~~~~~la~ry~~~p~V~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
++++.+++||++ .|..|+++|||.. ++.. . ..+......+++++|+.+|+..|
T Consensus 167 ~ya~~~~~~~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~I 239 (468)
T 2j78_A 167 EYSRVLFENFGD--RVKNWITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKI 239 (468)
T ss_dssp HHHHHHHHHHTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred HHHHHHHHHhCC--ccceEEEccccchhhccccccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 999999999999 7888999999974 2211 1 11222345667899999887543
|
| >1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=3.2e-17 Score=167.86 Aligned_cols=238 Identities=16% Similarity=0.203 Sum_probs=156.7
Q ss_pred HhHHhhhCccchH-----HHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCC--
Q 046395 171 KLMRDHWKSYITE-----EDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA-- 243 (535)
Q Consensus 171 ~~~~~hw~~~ite-----~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~-- 243 (535)
..+++||.+|+++ ++++.||++|+|+|||++ | .+|.++. + .++.+++++++|+++||+|+||+|.
T Consensus 13 ~~~e~~g~~~~~~~G~~~d~~~ilk~~G~N~VRi~~--w--~~P~~g~-~---~~~~~~~~~~~A~~~GlkV~ld~Hysd 84 (332)
T 1hjs_A 13 VVEERAGVSYKNTNGNAQPLENILAANGVNTVRQRV--W--VNPADGN-Y---NLDYNIAIAKRAKAAGLGVYIDFHYSD 84 (332)
T ss_dssp HHHHHTTCCCBCTTSCBCCHHHHHHHTTCCEEEEEE--C--SSCTTCT-T---SHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred HHHHHcCCEEECCCCCcccHHHHHHHCCCCEEEEee--e--eCCCCCc-C---CHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 4688999999997 899999999999999997 3 4665443 2 6899999999999999999999995
Q ss_pred ---CCCCCCCCCCCCCCCCCCCCC---hHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC-------CCChHHHHH
Q 046395 244 ---LRVSQNGSPHSGSRDGFQEWS---DSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP-------DLKLDSLKT 309 (535)
Q Consensus 244 ---~pg~~ng~~~sg~~~~~~~W~---~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~-------~~~~~~~~~ 309 (535)
.|+.|+. ...|. ++..+...++...++++++... .+..+++.||+... ....+.+.+
T Consensus 85 ~WadPg~Q~~---------p~~W~~~~~~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~ 155 (332)
T 1hjs_A 85 TWADPAHQTM---------PAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIAR 155 (332)
T ss_dssp SCCBTTBCBC---------CTTCCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHH
T ss_pred CcCCccccCC---------ccccccchHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHH
Confidence 3666642 23443 3333444444444444443211 23347899998741 125688999
Q ss_pred HHHHHHHHHHhcC--CCcEEEEcCCCCCChh-------hhhccc--CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHH
Q 046395 310 YYKAGYDTVRKYS--SSAYVILSNRLGGEWS-------ELLSFA--SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYR 378 (535)
Q Consensus 310 ~~~~~~~aIR~~~--p~~~ii~~~~~g~~~~-------~~~~~~--~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~ 378 (535)
++++++++||+.+ |...|+++...+.+.. .+.... ....-.|+.+|+|+.+... .+ ++.+..
T Consensus 156 l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~w~~~---~~----~~~l~~ 228 (332)
T 1hjs_A 156 LLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSSS---AT----LSALKS 228 (332)
T ss_dssp HHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCTT---CC----HHHHHH
T ss_pred HHHHHHHHHHHhccCCCCeEEEEeCCccchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcccCCC---CC----HHHHHH
Confidence 9999999999999 9888887643332321 122111 1126789999988754211 11 222322
Q ss_pred hhhHHHHHHhhcCCCcEEEeccCCCcCCCC-------------CCHHHHHHHHHHHHHHHhhC--CcceEEEe
Q 046395 379 QRSSDLRNVTTSDGPLSFVGEWSCEWEAEG-------------ASKRDYQRFAEAQLDVYGRA--TFGWAYWA 436 (535)
Q Consensus 379 ~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~-------------~~~~~~~~~~~~ql~~~~~~--~~Gw~~W~ 436 (535)
.+..+.+..++|++|.|+|..+...+ .+.+.-..|+++.++.+.+. +.|-+||.
T Consensus 229 ----~l~~~~~rygKpv~v~EtG~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~l~~~~~~~~~~~~~~G~fyWe 297 (332)
T 1hjs_A 229 ----SLDNMAKTWNKEIAVVETNWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWE 297 (332)
T ss_dssp ----HHHHHHHHHCCEEEEEECCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred ----HHHHHHHHHCCCEEEEEccCccCCCCCcccccccccCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEEc
Confidence 24444434467799999998764211 23445567888888888764 57888886
|
| >1vff_A Beta-glucosidase; glycosyl hydrolase, membrane-bound enzyme, thermostability, TIM barrel, alkylglucosides; 2.50A {Pyrococcus horikoshii} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.75 E-value=5.6e-18 Score=178.14 Aligned_cols=145 Identities=18% Similarity=0.243 Sum_probs=112.5
Q ss_pred EEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccccc
Q 046395 127 QVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIA 206 (535)
Q Consensus 127 ~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~ 206 (535)
.-||++|.||+ +.||+|+..... ....+ ..+.|. +||+.+ ++|+++|+++|+|++|++|.| .+
T Consensus 13 ~atsa~Q~EGa---kg~s~wD~~~~~-~~~~~------~~~~a~----d~Y~~~--~eDi~lm~~~G~~~~R~si~W-~r 75 (423)
T 1vff_A 13 TATSSHQIEGN---NRWNDWWYYEQI-GKLPY------RSGKAC----NHWELY--RDDIQLMTSLGYNAYRFSIEW-SR 75 (423)
T ss_dssp EECCSTTTSSC---CTTBHHHHHHHT-TSSCC------SCCCTT----CHHHHH--HHHHHHHHHHTCCEEEEECCH-HH
T ss_pred EeCchhhcCCC---CCCcceeeeccc-CCCcC------CCcccc----cchhcc--HHHHHHHHHcCCCEEEeecCH-HH
Confidence 56789999987 789999864321 11101 234555 888877 999999999999999999976 77
Q ss_pred cCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCC
Q 046395 207 YDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRYADH 285 (535)
Q Consensus 207 ~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~ 285 (535)
+.|.++ .++++.++++|++|+.|.++||+++|+||+.. .+........|. +..++.|.++++.+++||++
T Consensus 76 i~P~~g-~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d-------~P~~l~~~ggw~~~~~~~~f~~ya~~~~~r~gd- 146 (423)
T 1vff_A 76 LFPEEN-KFNEDAFMKYREIIDLLLTRGITPLVTLHHFT-------SPLWFMKKGGFLREENLKHWEKYIEKVAELLEK- 146 (423)
T ss_dssp HCSBTT-BCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHTTGGGSGGGHHHHHHHHHHHHHHTTT-
T ss_pred hCCCCC-CcCHHHHHHHHHHHHHHHHCCCEEEEEccCCc-------ccHHHHhcCCCCCHHHHHHHHHHHHHHHHHhCC-
Confidence 888874 58999999999999999999999999999741 100000001344 68899999999999999999
Q ss_pred CcEEEEEeecCCCC
Q 046395 286 PSLVAIELMNEPKA 299 (535)
Q Consensus 286 p~V~~~el~NEP~~ 299 (535)
|..|+++|||..
T Consensus 147 --V~~W~t~NEp~~ 158 (423)
T 1vff_A 147 --VKLVATFNEPMV 158 (423)
T ss_dssp --CCEEEEEECHHH
T ss_pred --CceEEEecCcch
Confidence 888999999963
|
| >1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=4.4e-15 Score=154.76 Aligned_cols=228 Identities=18% Similarity=0.287 Sum_probs=153.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCC--CCCCCccc--hHHHHHHHHHHHHHcCCEEEEecCC-----CCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPK--PPKPFVGG--SLQALDNAFRWAQKYGMKVIVDLHA-----LRVSQNGSPH 253 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~--~~~~~~~~--~l~~ld~~i~~a~~~Gi~VIldlH~-----~pg~~ng~~~ 253 (535)
++.++.||++|+|+|||++ | .+|. .+.+|.++ .++.+.+++++|+++||+|+||+|- .|+.|+.
T Consensus 51 ~d~~~ilk~~G~N~VRlrv--w--v~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~--- 123 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRI--W--NDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKA--- 123 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEE--C--SCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCC---
T ss_pred chHHHHHHHCCCCEEEEee--e--cCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccC---
Confidence 6789999999999999988 3 3443 34455433 5899999999999999999999994 2555542
Q ss_pred CCCCCCCCCCC----hHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC---CCChHHHHHHHHHHHHHHHhcCCCc
Q 046395 254 SGSRDGFQEWS----DSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP---DLKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 254 sg~~~~~~~W~----~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
...|. ++..+.+.++-+.++++++++. .+-.+++.||+... ....+.+..++.+++++||+++|+.
T Consensus 124 ------P~aW~~~~~~~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~la~ll~ag~~aVR~v~p~~ 197 (399)
T 1ur4_A 124 ------PKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNI 197 (399)
T ss_dssp ------CGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTS
T ss_pred ------ccccccCCHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHHHHHHHHHHHHHHHhCCCC
Confidence 22343 3445555666666666666544 45679999999862 2246789999999999999999999
Q ss_pred EEEEcCCCCCCh---hhhhcc--cCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEecc
Q 046395 326 YVILSNRLGGEW---SELLSF--ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW 400 (535)
Q Consensus 326 ~ii~~~~~g~~~---~~~~~~--~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEf 400 (535)
.|+++...+.+. ..+.+. ..+.+-.|+.+|+|+.|.. + ++.+.. .+..+.+..++|++|.|+
T Consensus 198 ~V~ih~~~~~~~~~~~~~~d~l~~~g~d~DvIG~syYp~W~~-----~----l~~l~~----~l~~l~~rygKpV~v~Et 264 (399)
T 1ur4_A 198 LVALHFTNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG-----T----LKNLTS----VLTSVADTYGKKVMVAET 264 (399)
T ss_dssp EEEEEECCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSC-----C----HHHHHH----HHHHHHHHHCCEEEEEEE
T ss_pred eEEEEeCCCcchHHHHHHHHHHHHcCCCcCeEeEecCccchh-----h----HHHHHH----HHHHHHHHhCCcEEEEEe
Confidence 888764333221 112111 1234678999999975421 1 222222 234443333567999999
Q ss_pred CCCcCCC------------------CCCHHHHHHHHHHHHHHHhhC---CcceEEEe
Q 046395 401 SCEWEAE------------------GASKRDYQRFAEAQLDVYGRA---TFGWAYWA 436 (535)
Q Consensus 401 g~~~~~~------------------~~~~~~~~~~~~~ql~~~~~~---~~Gw~~W~ 436 (535)
|..+... ..+.+.-.+|+++.++.+... +.|-+||.
T Consensus 265 G~~~~~~~~d~~~n~~~~~~~~~~~~~s~~gQa~~l~~l~~~v~~~~~~g~GvfyWe 321 (399)
T 1ur4_A 265 SYTYTAEDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWE 321 (399)
T ss_dssp CCCSCSCCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred cCCccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhccCceEEEEEEc
Confidence 9876321 113455677888888888764 46888886
|
| >3apg_A Beta-glucosidase; TIM barrel, hydrolase, sugar binding, hydrolysis; 2.35A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=169.66 Aligned_cols=162 Identities=17% Similarity=0.224 Sum_probs=117.4
Q ss_pred EEecCCCCCCCc-ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcccc
Q 046395 127 QVTADYKGPSTW-EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWI 205 (535)
Q Consensus 127 ~v~a~~~~~~~w-~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~ 205 (535)
.-+|++|.||+| +.+.||+|+........-.-....+-..+.|. +||+.| ++|+++|+++|+|++|+.|.| .
T Consensus 12 ~Atsa~Q~EGa~~~gkg~SiwD~~~~~~~~~~~~~~~~~~~~~a~----d~Y~~y--~eDi~l~~~lG~~~~R~si~W-s 84 (473)
T 3apg_A 12 YSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGP----AYWHLY--KQDHDIAEKLGMDCIRGGIEW-A 84 (473)
T ss_dssp EECCHHHHSCSSTTCCCCCHHHHHHHCHHHHHTTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEECCH-H
T ss_pred EecchhhhcCCcCCCCcCeeeEEcccCCCccccccccCCCCcccc----cchhHH--HHHHHHHHHcCCCEEEEecch-h
Confidence 567889999999 45788999864321100000011222345566 888887 999999999999999999965 8
Q ss_pred ccCCCCCC--CCc---------------------------cchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC-C
Q 046395 206 AYDPKPPK--PFV---------------------------GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS-G 255 (535)
Q Consensus 206 ~~~p~~~~--~~~---------------------------~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s-g 255 (535)
++.|.++. .++ ++.+++++++|+.+.++||++||+|++..--+ |.+. +
T Consensus 85 RI~P~~g~~~~~n~~~~~~~~~~~~~~~~~~l~~l~~~an~~g~~~Y~~~id~l~~~Gi~pivtL~H~~lP~--wl~d~~ 162 (473)
T 3apg_A 85 RIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPL--WIHDPI 162 (473)
T ss_dssp HHCCSCCTTSCCEEEECTTSCEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCSCCCT--TTBCHH
T ss_pred hccccCCCCCCcccccccccccccccchhhHHHHHHhhhhHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCH--HHHhCC
Confidence 88998761 477 77899999999999999999999997641100 1110 0
Q ss_pred ------CCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 256 ------SRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 256 ------~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
.......|. +.....|.++.+.+++||++ .|..|.++|||..
T Consensus 163 ~~~~~~~~~~~~Gw~~~~~v~~F~~ya~~~~~~~gd--~V~~W~t~NEp~~ 211 (473)
T 3apg_A 163 AVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDD--LVDMWSTMNEPNV 211 (473)
T ss_dssp HHHHHCTTSSCBGGGSHHHHHHHHHHHHHHHHHHGG--GCSEEEEEECHHH
T ss_pred CccccccCCccCCCCCccHHHHHHHHHHHHHHHhCC--cceEEEEecCcch
Confidence 001122566 78899999999999999999 5889999999963
|
| >3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A* | Back alignment and structure |
|---|
Probab=99.67 E-value=1.2e-16 Score=169.66 Aligned_cols=110 Identities=17% Similarity=0.200 Sum_probs=92.6
Q ss_pred CCCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCC
Q 046395 15 LDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKF 94 (535)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~ 94 (535)
++ .+|+||| .+|+|||+++++|..++++++.+ +.||+|.||+ +.+.+.||+.|++||++++ ++.|+|+++.|++
T Consensus 217 ~~-g~vAlks-~~GkYL~~~g~~g~L~~~~~~~~--g~~E~F~L~~-~~~qVaL~s~ngkyVsa~~-gg~l~An~~~~~~ 290 (493)
T 3llp_A 217 RS-GKVAFRD-CEGRYLAPSGPSGTLKAGKATKV--GKDELFALEQ-SCAQVVLQAANERNVSTRQ-GMDLSANQDEETD 290 (493)
T ss_dssp C---CEEEEC-TTSCBEEEETTTTEEEECC---C--CGGGCEEEEE-CCCEEEEECTTSCEEECC--CCCCEEEESCCSG
T ss_pred eC-CEEEEEe-CCCCEEeEECCCCeEEeccCCCC--CCceEEEEEe-CCCEEEEEecCCcEEEecC-CceEEeeCCCCCC
Confidence 45 6899999 99999999998777777999999 9999999999 8999999999999999997 7789999999999
Q ss_pred CCceEEEecCCCCceeEEEecCCceEEEecccEEecC
Q 046395 95 PEPFQITRKNGEPHRVRFRASNGYFLQAKSEMQVTAD 131 (535)
Q Consensus 95 ~e~f~~~~~~~~~~~v~I~~~nG~flq~~~~~~v~a~ 131 (535)
||+|+|++++++ .++.+|+.+|+||.+.+...+.+.
T Consensus 291 ~EtFql~~~~~~-~~vaLRs~~GkYl~~~~~g~v~a~ 326 (493)
T 3llp_A 291 QETFQLEIDRDT-KKCAFRTHTGKYWTLTATGGVQST 326 (493)
T ss_dssp GGCEEEEECTTT-CCEEEECTTSCEEEECTTSBEEEE
T ss_pred cEEEEEEEeCCC-CEEEEEeCCCCEEEEeCCCcEEec
Confidence 999999998643 479999999999998765555544
|
| >1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=7.4e-16 Score=171.57 Aligned_cols=121 Identities=26% Similarity=0.357 Sum_probs=95.7
Q ss_pred hhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecC-CCCCC------
Q 046395 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH-ALRVS------ 247 (535)
Q Consensus 175 ~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH-~~pg~------ 247 (535)
+||+....++|++.||++|+|+||+++..|..++|.++. | .++.||++|+.|+++||+||++++ ..+..
T Consensus 9 e~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~-~---d~~~ld~~ld~a~~~Gi~vil~~~~~~~P~Wl~~~~ 84 (645)
T 1kwg_A 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGR-L---EWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRY 84 (645)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTB-C---CCHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHHC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEEeeechhhcCCCCCc-c---ChHHHHHHHHHHHHCCCEEEEeCCCCCCChhHhhcC
Confidence 678888889999999999999999998778889998875 6 468999999999999999999994 32210
Q ss_pred -------CCCCC-CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 248 -------QNGSP-HSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 248 -------~ng~~-~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
.+|.. ..|.+...+...+.+++.+.++++.|++||+++|.|++|++.|||..
T Consensus 85 P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~V~~w~i~NE~~~ 144 (645)
T 1kwg_A 85 PEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGC 144 (645)
T ss_dssp GGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTT
T ss_pred CceeeeCCCCcCcccCccccCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcCCC
Confidence 01110 11222222333378899999999999999999999999999999975
|
| >3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=1.7e-15 Score=167.61 Aligned_cols=219 Identities=17% Similarity=0.231 Sum_probs=144.7
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
.++||+.||++|+|+||+.. . +.. ++++++|.++||+||.++|.... ....
T Consensus 346 ~~~d~~~~k~~G~N~vR~~h-----~---p~~----------~~~~~~cD~~Gi~V~~e~~~~~~-----------~~~~ 396 (613)
T 3hn3_A 346 LVKDFNLLRWLGANAFRTSH-----Y---PYA----------EEVMQMCDRYGIVVIDECPGVGL-----------ALPQ 396 (613)
T ss_dssp HHHHHHHHHHHTCCEEECTT-----S---CCC----------HHHHHHHHHHTCEEEEECSCBCC-----------CSGG
T ss_pred HHHHHHHHHHcCCCEEEccC-----C---CCh----------HHHHHHHHHCCCEEEEecccccc-----------cccc
Confidence 47899999999999999821 1 111 25789999999999999985310 0111
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCChhhhh
Q 046395 262 EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELL 341 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~~~~~~ 341 (535)
.|.+...+.+.+.++.+++|+++||+|++|.+.|||.. ..+....+++++++.+|+.||+++|..+... ++..
T Consensus 397 ~~~~~~~~~~~~~~~~~v~r~~nhPSIi~W~~~NE~~~---~~~~~~~~~~~l~~~~k~~DptRpv~~~~~~--~~~~-- 469 (613)
T 3hn3_A 397 FFNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPAS---HLESAGYYLKMVIAHTKSLDPSRPVTFVSNS--NYAA-- 469 (613)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCT---TSHHHHHHHHHHHHHHHHHCTTSCEEEEECS--CTTT--
T ss_pred ccChHHHHHHHHHHHHHHHHhCCCCeEEEEecccCccc---ccchHHHHHHHHHHHHHHhCCCCCEEEEccc--Cccc--
Confidence 34467778889999999999999999999999999974 2345789999999999999999998874211 1111
Q ss_pred cccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC------CCCHHHHH
Q 046395 342 SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE------GASKRDYQ 415 (535)
Q Consensus 342 ~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~------~~~~~~~~ 415 (535)
........++++|.|..+..... ..+..... ....+..+.+..+.|++++|||+..... ....++++
T Consensus 470 -~~~~~~~Dv~~~n~Y~~wy~~~~--~~~~~~~~----l~~~~~~~~~~~~kPi~isE~G~~~~~g~~~~~~~~~seeyQ 542 (613)
T 3hn3_A 470 -DKGAPYVDVICLNSYYSWYHDYG--HLELIQLQ----LATQFENWYKKYQKPIIQSEYGAETIAGFHQDPPLMFTEEYQ 542 (613)
T ss_dssp -CSSGGGCSSEEEECCBTTTBSTT--CGGGHHHH----HHHHHHHHHHHHCSCEEEEECCCCBCTTCCCSSCCTBSHHHH
T ss_pred -cccccccceeEEeccccccCCCc--cHHHHHHH----HHHHHHHHHHhcCCCEEEEeeCCCCCCCcccCCCCCCCHHHH
Confidence 00112336789999975421111 11111111 2222333323324569999999863211 11124444
Q ss_pred -HHHHHHHHHHhh----CCcceEEEeeeeCCCC
Q 046395 416 -RFAEAQLDVYGR----ATFGWAYWAYKFAESP 443 (535)
Q Consensus 416 -~~~~~ql~~~~~----~~~Gw~~W~~k~~~~~ 443 (535)
.|++.++.++.+ .-+|++.|++..-.+.
T Consensus 543 ~~~~~~~~~~~~~~~~~~~~G~~~W~~~Df~~~ 575 (613)
T 3hn3_A 543 KSLLEQYHLGLDQKRRKYVVGELIWNFADFMTE 575 (613)
T ss_dssp HHHHHHHHHHHHTTTTTTEEEEEESCSBCBCCC
T ss_pred HHHHHHHHHHHHhhcccceEEEEEEEeeecccc
Confidence 577778887765 3479999999876544
|
| >1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=7.8e-17 Score=170.29 Aligned_cols=182 Identities=19% Similarity=0.283 Sum_probs=133.4
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+| +.+.||+|+..... .. ...++-..+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 13 ~Ataa~Q~EGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----d~Yh~y--~eDi~lm~~~G~~~~R~si~W- 81 (447)
T 1e4i_A 13 TATAAYQIEGAYQEDGRGLSIWDTFAHT-PG---KVFNGDNGNVAC----DSYHRY--EEDIRLMKELGIRTYRFSVSW- 81 (447)
T ss_dssp EECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---TSGGGCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH-
T ss_pred eeCcHHhhCCCcCCCCCcCceeeEcccC-CC---cccCCCCCcccc----chhhcc--HHHHHHHHHcCCCeEEecCcH-
Confidence 567889999999 35889999864321 11 112222344566 888888 999999999999999999965
Q ss_pred cccCCC-CCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 205 IAYDPK-PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 205 ~~~~p~-~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|. ++ .+++..++.++++|+.|.++||.++|+||+.. .+........|. ++..+.|.++++.+++||
T Consensus 82 ~Ri~P~G~g-~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d-------~P~~l~~~ggw~~r~~~~~F~~ya~~~~~~~ 153 (447)
T 1e4i_A 82 PRIFPNGDG-EVNQKGLDYYHRVVDLLNDNGIEPFCTLYHWD-------LPQALQDAGGWGNRRTIQAFVQFAETMFREF 153 (447)
T ss_dssp HHHSTTSSS-CCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHTTTTSSTHHHHHHHHHHHHHHHHT
T ss_pred HHhccCCCC-CcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCc-------ccHHHHhcCCCCCchhHHHHHHHHHHHHHHh
Confidence 788888 55 48999999999999999999999999998641 111001122454 688999999999999999
Q ss_pred CCCCcEEEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 283 ADHPSLVAIELMNEPKA------------PDLK-L-------DSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
++ .|..|.++|||.. ++.. . ..+......+++++|+.+|+..|-+
T Consensus 154 gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 218 (447)
T 1e4i_A 154 HG--KIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGI 218 (447)
T ss_dssp BT--TBCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred CC--cceeEEEecCccccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEE
Confidence 99 5999999999974 1111 1 1222334667788999988765433
|
| >1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A | Back alignment and structure |
|---|
Probab=99.66 E-value=8.7e-17 Score=169.34 Aligned_cols=180 Identities=21% Similarity=0.276 Sum_probs=131.0
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+| +.+.||+|+..... .. ....+...+.|. +||+.+ ++|+++|+++|+|++|++|.|
T Consensus 12 ~atsa~Q~EGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R~si~W- 80 (431)
T 1ug6_A 12 VATSAYQIEGATQEDGRGPSIWDAFAQR-PG---AIRDGSTGEPAC----DHYRRY--EEDIALMQSLGVRAYRFSVAW- 80 (431)
T ss_dssp EECCHHHHCCCTTSTTCCCBHHHHHTTS-TT---SSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCCEEEEECCH-
T ss_pred eeCchHhhcCCcCCCCCCCeEEEEeecC-CC---cccCCCCCcccc----cchhhh--HHHHHHHHHcCCCEEEcccCH-
Confidence 567889999999 44789999864321 11 111222234566 888877 899999999999999999976
Q ss_pred cccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhC
Q 046395 205 IAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRYA 283 (535)
Q Consensus 205 ~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~ 283 (535)
.+++|.+.+.+++..++.++++|+.|.++||++||+||+.. .+........|. +...+.|.++++.+++||+
T Consensus 81 ~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~H~d-------~P~~l~~~ggw~~~~~~~~F~~ya~~~~~~~g 153 (431)
T 1ug6_A 81 PRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHWD-------LPLALEERGGWRSRETAFAFAEYAEAVARALA 153 (431)
T ss_dssp HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHTTTGGGSHHHHHHHHHHHHHHHHHHT
T ss_pred HHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCC-------CCcchhhcCCCCChHHHHHHHHHHHHHHHHhc
Confidence 77888763458999999999999999999999999998741 110001113454 7889999999999999999
Q ss_pred CCCcEEEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCcEE
Q 046395 284 DHPSLVAIELMNEPKA------------PDLK-L-------DSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 284 ~~p~V~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
+ .|..|.++|||.. ++.. . ..+......+++++|+ +|+..|
T Consensus 154 d--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~-~~~~~i 214 (431)
T 1ug6_A 154 D--RVPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRA-AGARRV 214 (431)
T ss_dssp T--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHH-TTCSEE
T ss_pred C--CCceEEEecCcchhhccccccccCCCCccchHHHHHHHHHHHHHHHHHHHHHHh-cCCCeE
Confidence 9 6888999999974 1211 1 1122234667789999 887553
|
| >3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans} | Back alignment and structure |
|---|
Probab=99.66 E-value=9.7e-17 Score=169.71 Aligned_cols=181 Identities=16% Similarity=0.238 Sum_probs=132.4
Q ss_pred cEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+| +.+.||+|+..... .. ...++...+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 13 G~Ataa~QiEGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----d~Y~~~--~eDi~lm~~~G~~~~R~si~W 82 (453)
T 3ahx_A 13 GTATAAYQIEGAYKEDEKGESIWDRFSHI-PG---NVAKMHNGDIAC----DHYHRY--KEDVQLLKSLGIKSYRFSIAW 82 (453)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eEeccHHhhCCCcCCCCCCCEeeEeeccc-CC---cccCCCCCcccc----cHHHHH--HHHHHHHHHhCCCeEecccCH
Confidence 3567899999999 45889999864321 11 112222334566 888887 999999999999999999965
Q ss_pred ccccCCC-CCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHH
Q 046395 204 WIAYDPK-PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASR 281 (535)
Q Consensus 204 w~~~~p~-~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~r 281 (535)
.+++|. ++ .+++..++.+|++|+.|.++||.++|+||+.. .+........|. +...+.|.++++.+++|
T Consensus 83 -sri~P~G~g-~~n~~G~~~y~~lid~l~~~GI~p~vtL~h~d-------~P~~l~~~ggw~~r~~~~~f~~ya~~~~~~ 153 (453)
T 3ahx_A 83 -PRIFPKGFG-EINQKGIQFYRDLIDELIKNDIEPAITIYHWD-------LPQKLQDIGGWANPQVADYYVDYANLLFRE 153 (453)
T ss_dssp -HHHCTTSSS-SCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHTTTGGGSHHHHHHHHHHHHHHHHH
T ss_pred -HHhccCCCC-CcCHHHHHHHHHHHHHHHHCCCEEEEEecCCC-------ccHhHhhCCCCCCchHHHHHHHHHHHHHHH
Confidence 788888 55 48999999999999999999999999998641 111011123454 78899999999999999
Q ss_pred hCCCCcEEEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCcEE
Q 046395 282 YADHPSLVAIELMNEPKA------------PDLK-L-------DSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 282 y~~~p~V~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
|++ .|..|.++|||.. ++.. . ..+......+++++|+.+|+..|
T Consensus 154 ~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~I 217 (453)
T 3ahx_A 154 FGD--RVKTWITHNEPWVASYLGYALGVHAPGIKDMKMALLAAHNILLSHFKAVKAYRELEQDGQI 217 (453)
T ss_dssp HTT--TCCEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTCCSCEE
T ss_pred hCC--ccceEEEccCcchhhccccccCcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 999 4899999999974 2111 1 11222345677899998887553
|
| >1qox_A Beta-glucosidase; hydrolase, cellulose degradation; 2.7A {Bacillus circulans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.65 E-value=1.2e-16 Score=169.05 Aligned_cols=182 Identities=16% Similarity=0.222 Sum_probs=133.0
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+| +.+.||+|+..... .. ...++...+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 13 ~Ataa~Q~EGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----d~Y~~~--~eDi~lm~~~G~~~~R~si~W- 81 (449)
T 1qox_A 13 VATAAYQIEGAYNEDGRGMSIWDTFAHT-PG---KVKNGDNGNVAC----DSYHRV--EEDVQLLKDLGVKVYRFSISW- 81 (449)
T ss_dssp EECCHHHHCCCTTSTTCCCBHHHHHHHS-TT---TSGGGCCTTTTT----CTTSCH--HHHHHHHHHHTCSEEEEECCH-
T ss_pred eeCcHHHhCCCcCCCCCCCEeeEEeccc-CC---cccCCCCCcccc----chhhhh--HHHHHHHHhcCCCeEEecCcH-
Confidence 567889999999 35789999864321 11 112222344566 899988 999999999999999999965
Q ss_pred cccCCC-CCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 205 IAYDPK-PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 205 ~~~~p~-~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.+++|. ++ .+++..++++|++|+.|.++||.++|+||+.. .+........|. ++..+.|.++++.+++||
T Consensus 82 ~ri~P~G~g-~~n~~Gl~~y~~~id~l~~~gI~p~vtL~h~d-------~P~~l~~~ggw~~r~~~~~f~~ya~~~~~~~ 153 (449)
T 1qox_A 82 PRVLPQGTG-EVNRAGLDYYHRLVDELLANGIEPFCTLYHWD-------LPQALQDQGGWGSRITIDAFAEYAELMFKEL 153 (449)
T ss_dssp HHHSTTSSS-SCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHTTTGGGSTHHHHHHHHHHHHHHHHH
T ss_pred HHhCcCCCC-CcCHHHHHHHHHHHHHHHHcCCeEEEEeCCCc-------ccHHHHhcCCCCCchHHHHHHHHHHHHHHHh
Confidence 788888 55 48999999999999999999999999998641 110001112344 678999999999999999
Q ss_pred CCCCcEEEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 283 ADHPSLVAIELMNEPKA------------PDLK-L-------DSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
+++ |..|.++|||.. ++.. . ..+......+++++|+..|+..|-+
T Consensus 154 gd~--V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~IGi 218 (449)
T 1qox_A 154 GGK--IKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGI 218 (449)
T ss_dssp TTT--CCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCC--CceEEEccCCcceeccccccCccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEE
Confidence 994 889999999974 2211 1 1222234667788999888765443
|
| >2xhy_A BGLA, 6-phospho-beta-glucosidase BGLA; hydrolase, glycosidase; 2.30A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.65 E-value=2e-16 Score=168.77 Aligned_cols=157 Identities=18% Similarity=0.282 Sum_probs=116.3
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccch------hhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEE
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQ------ITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVR 198 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~------~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VR 198 (535)
.-||++|.||+| +.+.||+|+............ ....+..+.|. +||+.+ ++|+++||++|+|++|
T Consensus 16 ~Ataa~Q~EGa~~edGkg~siwD~~~~~~~~~~~~~~~~~~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R 89 (479)
T 2xhy_A 16 GAVAAHQVEGGWNKGGKGPSICDVLTGGAHGVPREITKEVLPGKYYPNHEAV----DFYGHY--KEDIKLFAEMGFKCFR 89 (479)
T ss_dssp CBCCHHHHCCCTTSTTCCCBTTTTBCCCBTTBCCCBCSSCCTTSCCHHHHTT----CHHHHH--HHHHHHHHHHTCSEEE
T ss_pred EeChhhhcCCCcCCCCCcCcceeecccCCCCccccCCccccccccCCCcccc----cchhhh--HHHHHHHHHcCCCEEE
Confidence 567889999999 458899998654321100000 00011234455 888877 9999999999999999
Q ss_pred eCCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHHHHHH
Q 046395 199 IPVGWWIAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQETVAII 275 (535)
Q Consensus 199 ipv~~w~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~~~~~ 275 (535)
++|.| .++.|.. .+.+++..++++|++|+.|.++||.+||+||+.. .+..... +..|. +..++.|.+++
T Consensus 90 ~sisW-~Ri~P~G~~g~~n~~gl~~yd~lid~l~~~GI~pivtL~H~d-------~P~~l~~~~ggw~~~~~~~~F~~ya 161 (479)
T 2xhy_A 90 TSIAW-TRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITLSHFE-------MPLHLVQQYGSWTNRKVVDFFVRFA 161 (479)
T ss_dssp EECCH-HHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHHSCGGGSTHHHHHHHHHH
T ss_pred eeCCH-HHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCCC-------CCHHHHhhcCCCCCHHHHHHHHHHH
Confidence 99976 7778873 2347888999999999999999999999999742 1100001 22354 68999999999
Q ss_pred HHHHHHhCCCCcEEEEEeecCCCC
Q 046395 276 DFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 276 ~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
+.+++||++ .|..|.++|||..
T Consensus 162 ~~~~~~~gd--~V~~w~t~NEp~~ 183 (479)
T 2xhy_A 162 EVVFERYKH--KVKYWMTFNEINN 183 (479)
T ss_dssp HHHHHHTTT--TCCEEEEETTTTG
T ss_pred HHHHHHhCC--CCCcEEEecCcch
Confidence 999999999 6778999999985
|
| >2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=1.3e-16 Score=168.75 Aligned_cols=185 Identities=16% Similarity=0.222 Sum_probs=134.2
Q ss_pred ceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-||++|.||+| +.+.||+|+..... .. ...++-..+.|. +||+.+ ++|+++||++|+|
T Consensus 17 ~Fl----wG~Ataa~QiEGa~~edGkg~siwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~ 82 (454)
T 2o9p_A 17 TFM----WGTSTSSYQIEGGTDEGGRTPSIWDTFCQI-PG---KVIGGDCGDVAC----DHFHHF--KEDVQLMKQLGFL 82 (454)
T ss_dssp TCE----EEEECCHHHHCCCTTSTTCCCBHHHHHTTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHTTTCC
T ss_pred CCE----EeeeCchhhcCCCcCCCCCcCchheeeccC-CC---cccCCCCCcccc----chHHHH--HHHHHHHHhcCCc
Confidence 566 33567899999999 45889999864321 11 112222344566 888877 9999999999999
Q ss_pred EEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAI 274 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~ 274 (535)
++|++|.| .+++|.++. +++..++.+|++|+.|.++||.++|+||+.. .+........|. +...+.|.++
T Consensus 83 ~~R~sisW-sRi~P~~g~-~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~ggw~~r~~~~~F~~y 153 (454)
T 2o9p_A 83 HYRFSVAW-PRIMPAAGI-INEEGLLFYEHLLDEIELAGLIPMLTLYHWD-------LPQWIEDEGGWTQRETIQHFKTY 153 (454)
T ss_dssp EEEEECCH-HHHCSSTTC-CCHHHHHHHHHHHHHHHHHTCEEEEEEESSC-------CBHHHHHTTGGGSTHHHHHHHHH
T ss_pred eEEecccH-HhhCCCCCC-cCHHHHHHHHHHHHHHHHCCCEEEEEecCCC-------ccHHHHhcCCCCCcchHHHHHHH
Confidence 99999965 788888665 8999999999999999999999999998641 110000012344 6789999999
Q ss_pred HHHHHHHhCCCCcEEEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcCCCcEE
Q 046395 275 IDFLASRYADHPSLVAIELMNEPKA------------PDLK-L-------DSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 275 ~~~la~ry~~~p~V~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
++.+++||++ .|..|.++|||.. ++.. . ..+......+++++|+.+|+..|
T Consensus 154 a~~~~~~~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~I 224 (454)
T 2o9p_A 154 ASVIMDRFGE--RINWWNTINEPYCASILGYGTGEHAPGHENWREAFTAAHHILMCHGIASNLHKEKGLTGKI 224 (454)
T ss_dssp HHHHHHHSSS--SCSEEEEEECHHHHHHHHHTSSSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEE
T ss_pred HHHHHHHhCC--cceeEEEecCcceecccccccCcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 9999999999 4889999999974 2211 1 11222345677889998887543
|
| >1uwi_A Beta-galactosidase; hydrolase, beta-glycosidase, glycosidase; 2.55A {Sulfolobus solfataricus} SCOP: c.1.8.4 PDB: 1gow_A | Back alignment and structure |
|---|
Probab=99.64 E-value=5.8e-16 Score=166.10 Aligned_cols=156 Identities=17% Similarity=0.229 Sum_probs=115.1
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+| +.+.||+|+........-.-...++--++.+. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 12 ~AtaAyQiEGa~~~~gkg~siWd~~~~~~~~~~~~~~~gd~~~~a~----d~Yh~y--~eDi~l~~elG~~~yRfSIsW- 84 (489)
T 1uwi_A 12 WSQAGFQSEMGTPGSEDLNTDWYKWVHDPENMAAGLVSGDLPENGP----GYWGNY--KTFHNNAQKMGLKIARLNSEW- 84 (489)
T ss_dssp EECCHHHHSCSSTTCCCCCBHHHHHHHCHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEECCH-
T ss_pred EEchHHhhcCCCCCCCCCCcceeeeeecCCcccCCCCCCCcccccc----chhhhH--HHHHHHHHHcCCCEEEEeCcH-
Confidence 567899999999 35778998754321000000001111122333 688888 999999999999999999997
Q ss_pred cccCCCCC---------------------------CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCC
Q 046395 205 IAYDPKPP---------------------------KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSR 257 (535)
Q Consensus 205 ~~~~p~~~---------------------------~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~ 257 (535)
.++.|++. +..++..+++++++|+.|.++||.++|+|||. +.+...
T Consensus 85 sRI~P~G~~~~~~~~~~~~~~~~~e~~e~~~~~~~~~~N~~Gl~fY~~lid~Ll~~GIeP~VTL~H~-------DlP~~L 157 (489)
T 1uwi_A 85 SRQFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFIQNMYHW-------PLPLWL 157 (489)
T ss_dssp HHHCCSCCCCCTTCCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTCEEEEESCCS-------CCBGGG
T ss_pred HHCCCCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCcceEEeecC-------CccHHH
Confidence 67777531 23577899999999999999999999999984 222111
Q ss_pred -----------CCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 258 -----------DGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 258 -----------~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
.....|. ++.++.|+++.+.+++||++ .|-.|-++|||.
T Consensus 158 ~d~y~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgd--rVk~W~T~NEp~ 208 (489)
T 1uwi_A 158 HDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYTAWKFDD--LVDEYSTMNEPN 208 (489)
T ss_dssp BCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTT--TCSEEEEEECHH
T ss_pred HHhhhhcccccccCCCcCCHHHHHHHHHHHHHHHHHhCC--ccCeEEEecCch
Confidence 1235676 88999999999999999999 788899999995
|
| >1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A | Back alignment and structure |
|---|
Probab=99.63 E-value=2e-14 Score=147.28 Aligned_cols=232 Identities=16% Similarity=0.234 Sum_probs=153.3
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
+++++.||++|+|+||+.| | .+|.++. + .++.+.++++.|+++||+|+||+|.-+. |..++.......
T Consensus 30 ~~~~~ilk~~G~n~vRlri--~--v~P~~g~-~---d~~~~~~~~~~ak~~Gl~v~ld~hysd~----wadP~~q~~p~~ 97 (334)
T 1fob_A 30 QALETILADAGINSIRQRV--W--VNPSDGS-Y---DLDYNLELAKRVKAAGMSLYLDLHLSDT----WADPSDQTTPSG 97 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE--C--SCCTTCT-T---CHHHHHHHHHHHHHTTCEEEEEECCSSS----CCBTTBCBCCTT
T ss_pred chHHHHHHHcCCCEEEEEE--E--ECCCCCc-c---CHHHHHHHHHHHHHCCCEEEEEeccCCC----CCCcccccCccc
Confidence 5799999999999999965 2 5666543 4 6899999999999999999999996311 111222222335
Q ss_pred CC----hHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCCC-------CChHHHHHHHHHHHHHHHhcC--CCcEEE
Q 046395 263 WS----DSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAPD-------LKLDSLKTYYKAGYDTVRKYS--SSAYVI 328 (535)
Q Consensus 263 W~----~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~~-------~~~~~~~~~~~~~~~aIR~~~--p~~~ii 328 (535)
|. ++..+.+.++.+.+++++++.. .|..|++.|||...- ...+.+..++.+++++||+.+ |...|+
T Consensus 98 W~~~~~~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~~l~~~~~~a~~avr~~~~~p~~~v~ 177 (334)
T 1fob_A 98 WSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIM 177 (334)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred cccCChHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHHHHHHHHHHHHHHHHHhccCCCCeEE
Confidence 64 4577788888888888887754 455689999997521 135789999999999999999 987777
Q ss_pred EcCCCCCChhh---h----hccc--CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEec
Q 046395 329 LSNRLGGEWSE---L----LSFA--SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGE 399 (535)
Q Consensus 329 ~~~~~g~~~~~---~----~~~~--~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGE 399 (535)
++-.-+.+... + .... ....-.++.+|+|+.+... .+ .+.+.. .++.+.+..++|++|.|
T Consensus 178 ~h~~~~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~w~~~---~~----~~~l~~----~l~~~~~rygKpv~itE 246 (334)
T 1fob_A 178 IHLDDGWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSAS---AT----LASLKT----SLANLQSTYDKPVVVVE 246 (334)
T ss_dssp EEESCTTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTT---CC----HHHHHH----HHHHHHHHHCCCEEEEE
T ss_pred EEcCCcCchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCCcCCC---CC----HHHHHH----HHHHHHHHHCCCEEEEE
Confidence 65322222211 1 1110 0115689999988754311 11 222222 23334333356799999
Q ss_pred cCCCcCCCC-------------CCHHHHHHHHHHHHHHHhhC--CcceEEEee
Q 046395 400 WSCEWEAEG-------------ASKRDYQRFAEAQLDVYGRA--TFGWAYWAY 437 (535)
Q Consensus 400 fg~~~~~~~-------------~~~~~~~~~~~~ql~~~~~~--~~Gw~~W~~ 437 (535)
+|..+.... .+.+.-.+|++..++.+.+. ..|.+||++
T Consensus 247 tG~~~~~d~~~~~~~~~~~~~~~s~~~Q~~~l~~~~~~v~~~~~~~G~f~We~ 299 (334)
T 1fob_A 247 TNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWEP 299 (334)
T ss_dssp CCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEECT
T ss_pred cccccCCCCccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEECc
Confidence 998764221 12344467788878877754 578999986
|
| >4ha4_A Beta-galactosidase; TIM barrel, beta-glycosidase, hydrolase; HET: GOL PG6; 1.37A {Acidilobus saccharovorans} PDB: 4ha3_A* 1uws_A* 1uwr_A* 1uwq_A* 1uwt_A* 1uwu_A* 2ceq_A* 2cer_A* 4eam_A 4ean_A | Back alignment and structure |
|---|
Probab=99.63 E-value=7.5e-16 Score=165.20 Aligned_cols=185 Identities=20% Similarity=0.262 Sum_probs=129.2
Q ss_pred cEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+| +.+.||+|+........-.-...++--++.+. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 11 G~AtaAyQiEGa~~~~g~~~s~wd~~~~~~~~~~~~~~~gd~~~~a~----d~yh~y--~eDi~l~~~mG~~~yRfSIsW 84 (489)
T 4ha4_A 11 GWSQAGFQSEMGTPGSEDPNSDWYAWVHDRENIAAGLVSGDFPENGP----GYWGNY--RKFHDAAQAMGLTAARIGVEW 84 (489)
T ss_dssp EEEECHHHHSCSSTTCCCCCBHHHHHHHCHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred EEechHHhhcCCcCCCCCCCcceeecccccCcccCCCcCCCCccccc----cHHHHH--HHHHHHHHHcCCCEEEeeccH
Confidence 3568899999999 34778988754321100000001111123344 678777 999999999999999999997
Q ss_pred ccccCCCCC----------------------------CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCC
Q 046395 204 WIAYDPKPP----------------------------KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSG 255 (535)
Q Consensus 204 w~~~~p~~~----------------------------~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg 255 (535)
.++.|++. +..+++.+++++++|+.|.++||.++|+|||. +.+.
T Consensus 85 -sRI~P~G~~~~~~~~e~~gd~~~~~~~~~g~~~~~~~~~N~~Gl~fY~~lid~Ll~~GIeP~VTL~H~-------DlP~ 156 (489)
T 4ha4_A 85 -SRIFPRPTFDVKVDAEVKGDDVLSVYVSEGALEQLDKMANRDAINHYREMFSDLRSRGITFILNLYHW-------PLPL 156 (489)
T ss_dssp -HHHCSSCCTTSCCEEEEETTEEEEEECCHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTCEEEEESCSS-------CCBT
T ss_pred -HhcCcCCCcccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCeeeEeecCC-------CchH
Confidence 77777542 12467799999999999999999999999984 3222
Q ss_pred CC-----------CCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC--------------CC-CCh----
Q 046395 256 SR-----------DGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA--------------PD-LKL---- 304 (535)
Q Consensus 256 ~~-----------~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~--------------~~-~~~---- 304 (535)
.. ..+..|. ++.++.|.++.+.+++||++ .|-.|-++|||.. +. .+.
T Consensus 157 ~L~d~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~~f~~fgd--rVk~W~T~NEp~~~~~~gy~~~~~~~~p~~~~~~~~~ 234 (489)
T 4ha4_A 157 WLHDPIAIRRGNLSAPSGWLDVRTVIEFAKFSAYVAWKLDD--LVYMYSTMNEPNVVWGLGYAAVKSGFPPGYLCLECAG 234 (489)
T ss_dssp TTBCHHHHHTTCTTSCBGGGSHHHHHHHHHHHHHHHHHHGG--GCSEEEEEECHHHHHHHHHTCGGGCCTTCCCCHHHHH
T ss_pred HHhhhhcccccccccCCCCCCHHHHHHHHHHHHHHHHHhCC--ccceEEEeccchhhhcccccccccCCCccccCHHHHH
Confidence 11 2345676 88999999999999999999 7888999999953 11 111
Q ss_pred ---HHHHHHHHHHHHHHHhcCCCcE
Q 046395 305 ---DSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 305 ---~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
..+......+++++|+..+..+
T Consensus 235 ~~~h~~l~Aha~a~~~~~~~~~~~i 259 (489)
T 4ha4_A 235 RAMKNLVQAHARAYDAVKAITKKPV 259 (489)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSCE
T ss_pred HHHHHHHHHHHHHHHHHHHhccCce
Confidence 1222334466778888877655
|
| >3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-16 Score=168.94 Aligned_cols=182 Identities=16% Similarity=0.219 Sum_probs=135.3
Q ss_pred cEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+| +.+.||+|+...... . .+.++...+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 20 G~Ataa~QiEGa~~~dGkg~SiwD~~~~~~-~---~i~~~~~~~~a~----D~Yhry--~eDi~Lm~elG~~~yRfSIsW 89 (458)
T 3ta9_A 20 GAATSSYQIEGAFNEDGKGESIWDRFSHTP-G---KIENGDTGDIAC----DHYHLY--REDIELMKEIGIRSYRFSTSW 89 (458)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTST-T---SSGGGCCTTTTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEEchhhhhCCCcCCCCCccchhhhhhccC-C---cccCCCCCcccc----chHHhH--HHHHHHHHHcCCCEEEecCcH
Confidence 3567899999999 458899998643211 0 111222345566 889888 999999999999999999986
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|.+.+.+++..++.++++|+.|.++||.++|+|++. +.+........|. ++..+.|.++.+.+++||
T Consensus 90 -sRI~P~g~g~~N~~Gl~fY~~lid~l~~~GIeP~vTL~H~-------dlP~~L~~~GGW~nr~~v~~F~~YA~~~f~~f 161 (458)
T 3ta9_A 90 -PRILPEGKGRVNQKGLDFYKRLVDNLLKANIRPMITLYHW-------DLPQALQDKGGWTNRDTAKYFAEYARLMFEEF 161 (458)
T ss_dssp -HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSHHHHHHHHHHHHHHHHHT
T ss_pred -HHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCeEEEEecCC-------CCCHhHHhcCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7888876345889999999999999999999999999874 2222222234565 789999999999999999
Q ss_pred CCCCcEEEEEeecCCCC------------CCC-Ch-H------HHHHHHHHHHHHHHhcCCCcEE
Q 046395 283 ADHPSLVAIELMNEPKA------------PDL-KL-D------SLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~------------~~~-~~-~------~~~~~~~~~~~aIR~~~p~~~i 327 (535)
++ .|-.|.++|||.. ++. +. . .+......+++++|+..|+..|
T Consensus 162 gd--rVk~W~T~NEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~h~~llAha~Av~~~r~~~~~~~I 224 (458)
T 3ta9_A 162 NG--LVDLWVTHNEPWVVAFEGHAFGNHAPGTKDFKTALQVAHHLLLSHGMAVDIFREEDLPGEI 224 (458)
T ss_dssp TT--TCCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEE
T ss_pred cC--cCCEEEEecCcchhhcccccccccCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 99 6888999999973 111 11 1 1222334567888888877554
|
| >1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A | Back alignment and structure |
|---|
Probab=99.62 E-value=2.3e-16 Score=168.27 Aligned_cols=186 Identities=19% Similarity=0.256 Sum_probs=134.5
Q ss_pred CceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
..|| -..-||++|.||+| +.+.||+|+..... .. ...++-..+.|. +||+.| ++|+++||++|+
T Consensus 20 ~~Fl----wG~Atsa~QiEGa~~~dGkg~siwD~~~~~-~~---~~~~~~~~~~a~----D~Yh~y--~eDi~lm~~lG~ 85 (479)
T 1gnx_A 20 EGFL----WGSATASYQIEGAAAEDGRTPSIWDTYART-PG---RVRNGDTGDVAT----DHYHRW--REDVALMAELGL 85 (479)
T ss_dssp TTCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTC
T ss_pred CCCE----EEEeccHHHhCCCcCCCCCcCeeeEEeccC-CC---cccCCCCCcccc----chhhcC--HHHHHHHHHcCC
Confidence 3576 33567899999999 44789999864321 11 111222234565 888888 999999999999
Q ss_pred CEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVA 273 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~ 273 (535)
|++|++|.| .++.|.+.+..++..+++++++|+.|.++||.+||+||+. +.+........|. ++..+.|.+
T Consensus 86 ~~yRfsIsW-sRI~P~g~g~~n~~gl~~Y~~lid~l~~~GI~p~vtL~H~-------d~P~~L~~~GGw~~r~~v~~F~~ 157 (479)
T 1gnx_A 86 GAYRFSLAW-PRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHW-------DLPQELENAGGWPERATAERFAE 157 (479)
T ss_dssp SEEEEECCH-HHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTCTTSTHHHHHHHH
T ss_pred CEEEecccH-HHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------cccHHHHhcCCCCCHHHHHHHHH
Confidence 999999976 7888875234788899999999999999999999999874 1111111113454 689999999
Q ss_pred HHHHHHHHhCCCCcEEEEEeecCCCC------------CCCC-h-------HHHHHHHHHHHHHHHhcC-CCcE
Q 046395 274 IIDFLASRYADHPSLVAIELMNEPKA------------PDLK-L-------DSLKTYYKAGYDTVRKYS-SSAY 326 (535)
Q Consensus 274 ~~~~la~ry~~~p~V~~~el~NEP~~------------~~~~-~-------~~~~~~~~~~~~aIR~~~-p~~~ 326 (535)
+++.+++||++ .|..|.++|||.. ++.. . ..+......+++++|+.+ |+..
T Consensus 158 ya~~~~~~~gd--~V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~a~h~lllAha~Av~~~r~~~~~~~~ 229 (479)
T 1gnx_A 158 YAAIAADALGD--RVKTWTTLNEPWCSAFLGYGSGVHAPGRTDPVAALRAAHHLNLGHGLAVQALRDRLPADAQ 229 (479)
T ss_dssp HHHHHHHHHTT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCE
T ss_pred HHHHHHHHhCC--cceeEEEecCcchhhhhhhccCcCCCCccChHHHHHHHHHHHHHHHHHHHHHHhhCCCCCe
Confidence 99999999999 6889999999974 1211 1 112233457778899988 7654
|
| >4hz8_A Beta-glucosidase; BGLB,BGL, hydrolase, glycosid barrel, carbohydrate/sugar binding; HET: BGC; 1.14A {Uncultured bacterium} PDB: 4hz7_A* 4hz6_A* 3fj0_A* 3cmj_A 3fiz_A* 3fiy_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=3.1e-16 Score=165.42 Aligned_cols=179 Identities=20% Similarity=0.286 Sum_probs=132.8
Q ss_pred cEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+| +.+.||+|+...... -.+.++...+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 12 G~Ataa~QiEGa~~~dGkg~siwD~~~~~~----~~~~~~~~~~~a~----D~Yhry--~eDi~l~~~lG~~~~R~si~W 81 (444)
T 4hz8_A 12 GAATSSYQIEGAWNEDGKGESIWDRFTRIP----GKIKNGDSGDVAC----DHYHRY--EQDLDLMRQLGLKTYRFSIAW 81 (444)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHTTST----TSSGGGCCTTTTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred EEEchHHhhCCCcCCCCCcCchhhhhhcCC----CcccCCCCCcccc----chhhhH--HHHHHHHHhcCCCEEEEeccH
Confidence 3567899999999 458899998643221 0112222345666 889888 999999999999999999976
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|.+.+.+++..++.+|++|+.|.++||.++|+|||. +.+........|. ++..+.|.++.+.+++||
T Consensus 82 -~Ri~P~g~g~~N~~gl~~Y~~lid~l~~~GI~p~vtL~H~-------dlP~~L~~~GGW~nr~~v~~F~~Ya~~~~~~~ 153 (444)
T 4hz8_A 82 -ARIQPDSSRQINQRGLDFYRRLVEGLHKRDILPMATLYHW-------DLPQWVEDEGGWLSRESASRFAEYTHALVAAL 153 (444)
T ss_dssp -HHHSCSTTCCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTGGGSTHHHHHHHHHHHHHHHHH
T ss_pred -HHcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------CCCHHHhhCcCCCChHHHHHHHHHHHHHHHHh
Confidence 7888876345788999999999999999999999999874 2211111123454 789999999999999999
Q ss_pred CCCCcEEEEEeecCCCC------------CCC-C-h------HHHHHHHHHHHHHHHhcCCC
Q 046395 283 ADHPSLVAIELMNEPKA------------PDL-K-L------DSLKTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~------------~~~-~-~------~~~~~~~~~~~~aIR~~~p~ 324 (535)
++ .|..|.++|||.. ++. . . ..+......+++++|+..|+
T Consensus 154 gd--rVk~W~T~NEp~~~~~~gy~~g~~~Pg~~~~~~~~~~~h~~llAha~Av~~~r~~~~~ 213 (444)
T 4hz8_A 154 GD--QIPLWVTHNEPMVTVWAGYHMGLFAPGLKDPTLGGRVAHHLLLSHGQALQAFRALSPA 213 (444)
T ss_dssp GG--GCSEEEEEECHHHHHHHHHTSCSSTTCCCCGGGHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred Cc--cCCeEEEccCcchhhhccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 99 6888999999973 111 1 1 12223345667889998887
|
| >3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=5.1e-16 Score=173.13 Aligned_cols=169 Identities=20% Similarity=0.309 Sum_probs=128.3
Q ss_pred cChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCC
Q 046395 164 YGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA 243 (535)
Q Consensus 164 ~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~ 243 (535)
+|.+..+ +||+....++|++.||++|+|+||++++.|..++|.++. | .++.||++|+.|+++||+|||.+++
T Consensus 11 ~G~~y~p----e~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~-~---~f~~ld~~i~~~~~~Gi~vil~~~~ 82 (675)
T 3tty_A 11 YGGDYNP----EQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVS-Y---DFTWLDDIIERLTKENIYLCLATST 82 (675)
T ss_dssp EEEECCG----GGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSC-B---CCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred EeeeCCh----hhCCHHHHHHHHHHHHHcCCCEEEEeeechhhhCCcCCc-c---CHHHHHHHHHHHHHCCCEEEEeCCC
Confidence 3555555 678777789999999999999999999778999998875 7 4789999999999999999999874
Q ss_pred C--C--------C----CCCCCC-CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC---ChH
Q 046395 244 L--R--------V----SQNGSP-HSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL---KLD 305 (535)
Q Consensus 244 ~--p--------g----~~ng~~-~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~---~~~ 305 (535)
. | . ..+|.. ..|.+...+.-++.+++.+.++++.|++||+++|.|++|++.|||..... +..
T Consensus 83 ~~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry~~~p~Vi~w~v~NE~g~~~y~~~~~~ 162 (675)
T 3tty_A 83 GAHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDHPQIVMWHVSNEYGGYCYCDNCEK 162 (675)
T ss_dssp TSCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHHTTTCTTEEEEECSSSCCCCCCSHHHHH
T ss_pred CCCChhhhhcCCceeeecCCCcCcccCCccCCCCCCHHHHHHHHHHHHHHHHHhCCCCcEEEEEEccccCCCcCCHHHHH
Confidence 2 1 1 111211 12333344444488999999999999999999999999999999986422 356
Q ss_pred HHHHHHHHHHHHHHhcCCCcE-EEEcCCCCCChhhhh
Q 046395 306 SLKTYYKAGYDTVRKYSSSAY-VILSNRLGGEWSELL 341 (535)
Q Consensus 306 ~~~~~~~~~~~aIR~~~p~~~-ii~~~~~g~~~~~~~ 341 (535)
.+++|+++.|..|++++..+- .+++..+ .+|+++.
T Consensus 163 ~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y-~~w~ei~ 198 (675)
T 3tty_A 163 QFRVWLKERYGTLEALNKAWNTSFWSHTF-YDWDEIV 198 (675)
T ss_dssp HHHHHHHHHHSSHHHHHHHTTTTGGGCCC-SSGGGCC
T ss_pred HHHHHHHHHhcCHHHHHHHhCcccccCcc-CCHHHhc
Confidence 799999999999998887543 2233344 4555553
|
| >1qvb_A Beta-glycosidase; TIM-barrel, thermostable, hydrolase; 2.40A {Thermosphaera aggregans} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.61 E-value=3.8e-15 Score=158.15 Aligned_cols=162 Identities=17% Similarity=0.264 Sum_probs=112.4
Q ss_pred EEecCCCCCCCccc--CCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTWEE--NDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w~~--~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-+|++|.||++.+ +.||.|+........-.-....+-..+.|. +||+.| ++|+++||++|+|++|+.|.|
T Consensus 11 ~Atsa~Q~EGa~~g~~~~~s~wd~~~~~~~~~~~~~~~~~~~~~a~----d~Y~~y--~eDi~lm~~~G~~~~R~sisW- 83 (481)
T 1qvb_A 11 YSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGP----GYWNLN--QNDHDLAEKLGVNTIRVGVEW- 83 (481)
T ss_dssp EECCHHHHSCCSTTCCCTTBHHHHHHHCHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEECCH-
T ss_pred eecccceeecCcCCCCCCCeEEEecccCCccccccccCCCCCcccc----chHHHH--HHHHHHHHHcCCCccEeccch-
Confidence 45678888844311 277887653211000000011112234566 888888 999999999999999999965
Q ss_pred cccCCCCCC-----------------CCc------------cchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC-
Q 046395 205 IAYDPKPPK-----------------PFV------------GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS- 254 (535)
Q Consensus 205 ~~~~p~~~~-----------------~~~------------~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s- 254 (535)
.++.|.++. .++ +..+++++++|+.|.++||++||+|++..--+ +.+-
T Consensus 84 sRi~P~~g~~~~~~v~~~~~~~~~~~~~n~~~~~~l~~~~n~~g~~~Y~~~id~l~~~Gi~p~vtL~H~~lP~--~L~~~ 161 (481)
T 1qvb_A 84 SRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHWPLPL--WLHNP 161 (481)
T ss_dssp HHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCSCCBT--TTBCH
T ss_pred hhhCCCCCCCccccccccccccccccccccccchhhhhhhcHHHHHHHHHHHHHHHHCCCEEEEEeCCCCCCH--HHHhc
Confidence 888888761 477 88899999999999999999999997642111 1000
Q ss_pred ------CCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 255 ------GSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 255 ------g~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
|.......|. +...+.|.++.+.+++||++ .|..|.++|||..
T Consensus 162 ~~~~~~~~~~~~gGw~n~~~~~~F~~ya~~~~~~~gd--~V~~W~t~NEp~~ 211 (481)
T 1qvb_A 162 IMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGE--LPVMWSTMNEPNV 211 (481)
T ss_dssp HHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTT--SCSEEEEEECHHH
T ss_pred CCcccccccccCCCcCCchHHHHHHHHHHHHHHHhCC--CccEEEEecccch
Confidence 0111123565 67899999999999999999 5889999999963
|
| >1pbg_A PGAL, 6-phospho-beta-D-galactosidase; hydrolase (glycosyl hydrolase); 2.30A {Lactococcus lactis} SCOP: c.1.8.4 PDB: 3pbg_A 2pbg_A 4pbg_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=3.8e-16 Score=166.10 Aligned_cols=176 Identities=15% Similarity=0.271 Sum_probs=130.4
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+| +.+.||+|+...... . +-..+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 13 ~Atsa~QiEGa~~edGkg~siwD~~~~~~------~--~~~~~~a~----D~Yh~y--~eDi~lm~~~G~~~~R~sisW- 77 (468)
T 1pbg_A 13 GATAAYQAEGATHTDGKGPVAWDKYLEDN------Y--WYTAEPAS----DFYHKY--PVDLELAEEYGVNGIRISIAW- 77 (468)
T ss_dssp EECCHHHHCCCTTSTTCCCBHHHHHHHTT------C--SCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH-
T ss_pred eeCchhccCCCcCCCCCccchhhhhhcCC------c--CCCccccc----cccccC--HHHHHHHHHhCCCEEEeccCH-
Confidence 567889999999 458899998643211 0 11234566 888888 999999999999999999965
Q ss_pred cccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhC
Q 046395 205 IAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRYA 283 (535)
Q Consensus 205 ~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~ 283 (535)
.++.|.+.+.+++..++.++++|+.|.++||.+||+||+.. .+........|. ++..+.|.++++.+++||+
T Consensus 78 sRi~P~G~g~~N~~gl~~y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~ggw~~r~~~~~F~~ya~~~~~~~g 150 (468)
T 1pbg_A 78 SRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHFD-------TPEALHSNGDFLNRENIEHFIDYAAFCFEEFP 150 (468)
T ss_dssp HHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESSC-------CBHHHHHTTGGGSTHHHHHHHHHHHHHHHHCT
T ss_pred hhhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCc-------cCHHHHhcCCCCChHHHHHHHHHHHHHHHHhC
Confidence 78888743458999999999999999999999999998641 111011112344 6889999999999999999
Q ss_pred CCCcEEEEEeecCCCC------------CCCC--h-------HHHHHHHHHHHHHHHhcCCCcEE
Q 046395 284 DHPSLVAIELMNEPKA------------PDLK--L-------DSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 284 ~~p~V~~~el~NEP~~------------~~~~--~-------~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
+ |..|.++|||.. |+.. . ..+......+++++|+..|+..|
T Consensus 151 d---V~~W~t~NEp~~~~~~gy~~G~~~Pg~~~~~~~~~~a~h~~llAha~Av~~~r~~~~~~~I 212 (468)
T 1pbg_A 151 E---VNYWTTFNEIGPIGDGQYLVGKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEI 212 (468)
T ss_dssp T---CCEEEEESCHHHHHHHHHTSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred C---CCEEEEecCchhhhcccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence 8 889999999973 1111 1 11222335677899998887554
|
| >3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A | Back alignment and structure |
|---|
Probab=99.60 E-value=7.6e-14 Score=153.99 Aligned_cols=230 Identities=17% Similarity=0.214 Sum_probs=144.9
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCC---CCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQ---NGSPHSGSRD 258 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~---ng~~~sg~~~ 258 (535)
.++|++.||++|+|+||+.- + +.. ++++++|.++||+||.+++...... .+++. +..
T Consensus 313 ~~~di~l~k~~g~N~vR~~h-y-------p~~----------~~~~~lcD~~Gi~V~~E~~~~g~~~~~~~~~~~-~~~- 372 (605)
T 3lpf_A 313 MVHDHALMDWIGANSYRTSH-Y-------PYA----------EEMLDWADEHGIVVIDETAAVGFNLSLGIGFEA-GNK- 372 (605)
T ss_dssp HHHHHHHHHHHTCCEEEECS-S-------CCC----------HHHHHHHHHHTCEEEEECSCBCCCSSCCCSCCC-CCC-
T ss_pred HHHHHHHHHHCCCcEEEecC-C-------CCc----------HHHHHHHHhcCCEEEEecccccccccccccccc-ccC-
Confidence 47899999999999999832 1 111 3588999999999999998532111 01111 100
Q ss_pred CCCCC-----ChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCC
Q 046395 259 GFQEW-----SDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333 (535)
Q Consensus 259 ~~~~W-----~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~ 333 (535)
....| .++..+.+.+.++.|++|+++||+|++|.+.||+... ......+++++++.+|+.||+++|...+..
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~NHPSIi~Ws~gNE~~~~---~~~~~~~~~~l~~~~k~~DptRpvt~~~~~ 449 (605)
T 3lpf_A 373 PKELYSEEAVNGETQQAHLQAIKELIARDKNHPSVVMWSIANEPDTR---PQGAREYFAPLAEATRKLDPTRPITCVNVM 449 (605)
T ss_dssp CSCSSSTTTSCHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCCC---STTHHHHHHHHHHHHHHHCSSSCEEEEEET
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHcCCCCeEEEEecCcccccc---cchHHHHHHHHHHHHHHHCCCCcEEEeccc
Confidence 00111 2577888999999999999999999999999999752 233467899999999999999998875321
Q ss_pred CCChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC-------
Q 046395 334 GGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA------- 406 (535)
Q Consensus 334 g~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~------- 406 (535)
... ...+. ...--.++++|.|..+. ... ...+.+.......+..+.+....|++++|||+....
T Consensus 450 ~~~--~~~d~-~~~~~Dvig~N~Y~gwY---~~~---g~~~~~~~~l~~~~~~w~~~~~KPiiisEyGa~~~~g~h~~~~ 520 (605)
T 3lpf_A 450 FCD--AHTDT-ISDLFDVLCLNRYYGWY---VQS---GDLETAEKVLEKELLAWQEKLHQPIIITEYGVDTLAGLHSMYT 520 (605)
T ss_dssp TSC--TTTCS-SGGGSSSEEEECCBTTT---BST---TCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCTTCCCSSC
T ss_pred cCc--ccccc-cccccceeeeccccccc---cCC---CchHHHHHHHHHHHHHHhhccCCCeEEEeeCCCCCcCcccCCC
Confidence 011 00000 11223567778876432 111 111222222222233333332456999999965321
Q ss_pred CCCCHHHHHHHHHHHHHHHhhC--CcceEEEeeeeCCCC
Q 046395 407 EGASKRDYQRFAEAQLDVYGRA--TFGWAYWAYKFAESP 443 (535)
Q Consensus 407 ~~~~~~~~~~~~~~ql~~~~~~--~~Gw~~W~~k~~~~~ 443 (535)
..-+.+.-..+++.+++++.+. -+|++.|.|....++
T Consensus 521 ~~~sEeyq~~~~~~~~~~~~~~~~~~G~~iW~~~Df~~~ 559 (605)
T 3lpf_A 521 DMWSEEYQCAWLDMYHRVFDRVSAVVGEQVWNFADFATS 559 (605)
T ss_dssp CTTSHHHHHHHHHHHHHHHTTCTTEEEEEEEEEECBCBC
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCcEEEEEEEEeeeecCc
Confidence 1112333346788889999873 379999999887554
|
| >4b3l_A Beta-glucosidase; hydrolase, glycosidase, carbohydrate-active enzyme; 2.51A {Streptococcus pyogenes} PDB: 4b3k_A | Back alignment and structure |
|---|
Probab=99.59 E-value=4.5e-16 Score=165.72 Aligned_cols=155 Identities=15% Similarity=0.257 Sum_probs=121.1
Q ss_pred cEEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcccc
Q 046395 126 MQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWI 205 (535)
Q Consensus 126 ~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~ 205 (535)
..-||++|.||+|+.+.||+|+........ ...++...+.|. +||+.| ++|+++||++|+|++|++|.| .
T Consensus 10 G~AtaA~QiEGa~dGkg~siwD~~~~~~~~---~~~~~~~~~~A~----D~Yhry--~eDi~lm~~lG~~~~Rfsi~W-~ 79 (479)
T 4b3l_A 10 GGATSGPQSEGRFAKQHRNLFDYWYEEEPD---LFYDYVGPDTAS----DAYHQI--ESDLTLLASLGHNSYRTSIQW-T 79 (479)
T ss_dssp EEECCHHHHSCSTTCCSCBHHHHHHHHCGG---GSGGGCCTTTTT----CHHHHH--HHHHHHHHTTTCCEEEEECCH-H
T ss_pred EEEChHHhhccCCCCCCccHHHHHhhcCCc---cccCCCCCcccc----chHHHH--HHHHHHHHHcCCCEEEeecCH-H
Confidence 356789999999966889999854321110 112344456677 899888 999999999999999999976 7
Q ss_pred ccCCC-CCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 206 AYDPK-PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 206 ~~~p~-~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
++.|. ..+.+++..++.++++|+.|.++||.++|+|||. +.+..... +..|. ++..+.|.++.+.+++||
T Consensus 80 Ri~P~~G~g~~n~~G~~~Y~~lid~l~~~gI~p~vtL~H~-------dlP~~L~~~yGGW~nr~~vd~F~~YA~~~f~~f 152 (479)
T 4b3l_A 80 RLIDDFEQATINPDGLAYYNRVIDACLANGIRPVINLHHF-------DLPIALYQAYGGWESKHVVDLFVAFSKVCFEQF 152 (479)
T ss_dssp HHBSCTTTTCBCHHHHHHHHHHHHHHHHHTCEEEEESCSS-------CCBHHHHHHHCGGGCHHHHHHHHHHHHHHHHHH
T ss_pred HhccCCCCCCcCHHHHHHHHHHHHHHHHCCCEeeEEecCC-------CcCHHHHHhcCCcCCHHHHHHHHHHHHHHHHHh
Confidence 88888 2235889999999999999999999999999874 22111111 13565 789999999999999999
Q ss_pred CCCCcEEEEEeecCCCC
Q 046395 283 ADHPSLVAIELMNEPKA 299 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~ 299 (535)
++ .|..|.++|||..
T Consensus 153 gd--rVk~WiT~NEp~~ 167 (479)
T 4b3l_A 153 GD--RVKDWFVHNEPMV 167 (479)
T ss_dssp TT--TCCEEEEEECHHH
T ss_pred Cc--cCCeEEEccCcch
Confidence 99 7888999999973
|
| >3vii_A Beta-glucosidase; cellulases, glycosyl hydrolase, hydrolase; HET: BTB; 0.97A {Neotermes koshunensis} PDB: 3ahz_A* 3vif_A* 3vih_A 3vig_A* 3vim_A* 3ai0_A* 3vin_A* 3vio_A* 3vip_A* 3vij_A* 3vik_A* 3vil_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=7.4e-16 Score=164.22 Aligned_cols=157 Identities=17% Similarity=0.276 Sum_probs=122.4
Q ss_pred ceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-||++|.||+| +.+.||+|+........ ........+.|. +||+.| ++|+++||++|+|
T Consensus 15 ~Fl----wG~AtaA~QiEGa~~~dGkg~SiwD~~~~~~~~---~i~~~~~gd~A~----D~Yhry--~EDi~Lm~elG~~ 81 (487)
T 3vii_A 15 EFK----LGAATASYQIEGAWDENGKGPNIWDTLTHEHPD---YVVDGATGDIAD----DSYHLY--KEDVKILKELGAQ 81 (487)
T ss_dssp TCE----EEEECCHHHHCCCTTGGGCCCBHHHHHHHHCGG---GSGGGCCSSSTT----CHHHHH--HHHHHHHHHHTCS
T ss_pred CCE----EEEeccHHhcCCCcCCCCCcccHHHhHhhcCCc---cccCCCCCCccc----ChHHHH--HHHHHHHHHcCCC
Confidence 566 33668899999999 45889999864321110 111222334566 889888 9999999999999
Q ss_pred EEEeCCccccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVA 273 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~ 273 (535)
+.|++|.| .++.|+. .+.+++..+++++++|+.|.++||.++|+|+|. +.+........|. ++.++.|.+
T Consensus 82 ~yRfSIsW-sRI~P~G~~g~~N~~Gl~fY~~lId~Ll~~GIeP~VTL~H~-------DlP~~L~~~GGW~nr~~v~~F~~ 153 (487)
T 3vii_A 82 VYRFSISW-ARVLPEGHDNIVNQDGIDYYNNLINELLANGIEPMVTMYHW-------DLPQALQDLGGWPNLVLAKYSEN 153 (487)
T ss_dssp EEEEECCH-HHHSTTSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTSTTSTHHHHHHHH
T ss_pred EEEeeCCH-HHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEEecC-------CCcHHHHHcCCCCCHHHHHHHHH
Confidence 99999987 7888874 345899999999999999999999999999984 3322222345676 789999999
Q ss_pred HHHHHHHHhCCCCcEEEEEeecCC
Q 046395 274 IIDFLASRYADHPSLVAIELMNEP 297 (535)
Q Consensus 274 ~~~~la~ry~~~p~V~~~el~NEP 297 (535)
+.+.++++|++ .|..|-++|||
T Consensus 154 YA~~~f~~fgd--rVk~W~T~NEp 175 (487)
T 3vii_A 154 YARVLFKNFGD--RVKLWLTFNEP 175 (487)
T ss_dssp HHHHHHHHHTT--TCCEEEEEECH
T ss_pred HHHHHHHHhcC--CCCeEEEecCc
Confidence 99999999999 78889999999
|
| >3f5l_A Beta-glucosidase; beta-alpha-barrels, glycosidase, hydrolase; HET: LB2 MES; 1.37A {Oryza sativa japonica group} PDB: 3aht_A* 3ahv_A* 3f5i_A* 3f5j_A* 3f5k_A* 3f4v_A* 2rgm_A* 2rgl_A* 3scr_A* 3scs_A* 3scp_A* 3scq_A* 3scu_A* 3scn_A* 3sco_A* 3sct_A* 3scv_A* 3scw_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=5.2e-16 Score=165.15 Aligned_cols=159 Identities=16% Similarity=0.259 Sum_probs=121.9
Q ss_pred CceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
-.|| -..-||++|.||+| +.+.||+|+..... .. ...++...+.|. +||+.| ++|+++||++|+
T Consensus 22 ~~Fl----wG~AtaA~QiEGa~~edGkg~SiwD~~~~~-~~---~i~~~~~gd~A~----D~Yhry--keDi~lm~elG~ 87 (481)
T 3f5l_A 22 KRFV----FGTVTSAYQVEGMAASGGRGPSIWDAFAHT-PG---NVAGNQNGDVAT----DQYHRY--KEDVNLMKSLNF 87 (481)
T ss_dssp TTCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTC
T ss_pred CCCE----EEEEchhhhhccCcCCCCCcCchhhhhhcC-CC---cccCCCCCCccc----chhhhH--HHHHHHHHHcCC
Confidence 3576 33678899999999 45889999864322 10 111222334566 899888 999999999999
Q ss_pred CEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQETV 272 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~~~~ 272 (535)
|++|++|.| .++.|.+.+.+++..++.++++|+.|.++||.++|+|||. +.+.... .+..|. ++..+.|.
T Consensus 88 ~~yRfsIsW-sRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~P~vTL~H~-------dlP~~L~~~yGGW~nr~~v~~F~ 159 (481)
T 3f5l_A 88 DAYRFSISW-SRIFPDGEGRVNQEGVAYYNNLINYLLQKGITPYVNLYHY-------DLPLALEKKYGGWLNAKMADLFT 159 (481)
T ss_dssp CEEEEECCH-HHHCTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEESCSS-------CCBHHHHHHHCGGGSTTHHHHHH
T ss_pred CEEEecCcH-HHhCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCC-------CCCHHHHHHhCCCCCHHHHHHHH
Confidence 999999976 7888886234889999999999999999999999999974 2211111 113454 67899999
Q ss_pred HHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 273 AIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 273 ~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
++.+.+++||++ .|..|.++|||..
T Consensus 160 ~Ya~~~~~~fgd--~Vk~W~T~NEp~~ 184 (481)
T 3f5l_A 160 EYADFCFKTFGN--RVKHWFTFNQPRI 184 (481)
T ss_dssp HHHHHHHHHHTT--TCCEEEEEECHHH
T ss_pred HHHHHHHHHhCC--CCCeEEEccCchH
Confidence 999999999998 7888999999963
|
| >3gnp_A OS03G0212800 protein; beta-alpha barrel, glycosidase, hydrolase; HET: SOG; 1.80A {Oryza sativa subsp} PDB: 3gno_A* 3gnr_A* | Back alignment and structure |
|---|
Probab=99.57 E-value=4.5e-16 Score=166.10 Aligned_cols=158 Identities=16% Similarity=0.286 Sum_probs=121.9
Q ss_pred CceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
-.|| -..-||++|.||+| +.+.||+|+..... .. .+.++...+.|. +||+.| ++|+++||++|+
T Consensus 19 ~~Fl----wG~AtaA~QiEGa~~edGkg~SiwD~~~~~-~~---~i~~~~~gd~A~----D~YhrY--~eDi~lm~elG~ 84 (488)
T 3gnp_A 19 EGFV----FGTASAAYQYEGAVKEDGRGQTIWDTFAHT-FG---KITDFSNADVAV----DQYHRF--EEDIQLMADMGM 84 (488)
T ss_dssp TTCE----EEEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---SSTTSCCCSSTT----CHHHHH--HHHHHHHHHHTC
T ss_pred CCCE----EEEEchHHHhCCCcCCCCCcCchhhhhhcC-CC---cccCCCCCCccc----chhhhH--HHHHHHHHHcCC
Confidence 3576 34678899999999 45889999864321 10 111222234566 889888 999999999999
Q ss_pred CEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQETV 272 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~~ 272 (535)
|++|++|.| .++.|.+.+.+++..++.++++|+.|.++||.++|+|||. +.+..... +..|. ++..+.|.
T Consensus 85 ~~yRfsI~W-sRI~P~g~g~~N~~Gl~~Y~~lid~l~~~GI~P~vTL~H~-------dlP~~L~~~yGGW~n~~~v~~F~ 156 (488)
T 3gnp_A 85 DAYRFSIAW-SRIYPNGVGQVNQAGIDHYNKLIDALLAKGIQPYVTLYHW-------DLPQALEDKYKGWLDRQIVDDFA 156 (488)
T ss_dssp CEEEEECCH-HHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHH
T ss_pred CEEEecccH-HHeeeCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEeCCC-------CCCHHHHHHhCCCCCHHHHHHHH
Confidence 999999976 7888887345899999999999999999999999999874 22111111 23454 68899999
Q ss_pred HHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 273 AIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 273 ~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
++.+.+++||++ .|..|.++|||.
T Consensus 157 ~Ya~~~~~~fgd--~Vk~W~T~NEp~ 180 (488)
T 3gnp_A 157 AYAETCFREFGD--RVKHWITLNEPH 180 (488)
T ss_dssp HHHHHHHHHHTT--TCCEEEEEECHH
T ss_pred HHHHHHHHHhCC--CCCEEEEccCcc
Confidence 999999999999 788899999996
|
| >3qom_A 6-phospho-beta-glucosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, glycoside hydrolase, hydrolase; HET: BGC; 1.50A {Lactobacillus plantarum} SCOP: c.1.8.0 PDB: 4gze_A | Back alignment and structure |
|---|
Probab=99.57 E-value=9.5e-16 Score=163.29 Aligned_cols=162 Identities=20% Similarity=0.253 Sum_probs=122.2
Q ss_pred ceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhh------ccChhhhhHhHHhhhCccchHHHHHHH
Q 046395 118 YFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITN------GYGPDKAAKLMRDHWKSYITEEDFKFM 189 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~------~~G~~~a~~~~~~hw~~~ite~D~~~i 189 (535)
.|| -..-||++|.||+| +.+.||+++..........-...+ .+..+.|. +||+.| ++|+++|
T Consensus 14 ~Fl----wG~AtaA~QiEGa~~~dGkg~siwD~~~~~~~~~p~~i~~~~~~~~~~~~~~A~----D~Yhry--~eDi~Lm 83 (481)
T 3qom_A 14 GFL----WGGAVAAHQLEGGYKEGGKGLSTADIMTLGTNERPREITDGVVAGKYYPNHQAI----DFYHRY--PEDIELF 83 (481)
T ss_dssp TCE----EEEECCHHHHCCCTTGGGCCCBGGGGBCCCCSSSCCCBCSSCCTTCCCTTTTTT----CHHHHH--HHHHHHH
T ss_pred CCE----EEEechHHHhcCCcCCCCCCCChhhcccccccCCcccccCCccccccCCCCccc----cHHHHH--HHHHHHH
Confidence 566 33567899999999 458999998654221000000111 12235666 899888 9999999
Q ss_pred HHcCCCEEEeCCccccccCCCCC-CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hH
Q 046395 190 SQNGLNAVRIPVGWWIAYDPKPP-KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DS 266 (535)
Q Consensus 190 k~~G~N~VRipv~~w~~~~p~~~-~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~ 266 (535)
|++|+|++|++|.| .++.|.+. ++.++..++.++++|+.|.++||.++|+|+|. +.+.... .+..|. ++
T Consensus 84 ~elG~~~yRfSIsW-sRI~P~G~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H~-------DlP~~L~~~yGGW~nr~ 155 (481)
T 3qom_A 84 AEMGFKCFRTSIAW-TRIFPNGDESEPNEAGLQFYDDLFDECLKNGIQPVVTLAHF-------EMPYHLVKQYGGWRNRK 155 (481)
T ss_dssp HHHTCSEEEEECCH-HHHSSSSCCSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTH
T ss_pred HHcCCCEEEecCcH-HHcCcCCCCCCcCHHHHHHHHHHHHHHHHCCCeEEEEEccC-------CCCHHHHhhcCCCCCHH
Confidence 99999999999986 78888752 35788999999999999999999999999874 2221111 124454 68
Q ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 267 DIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 267 ~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
..+.|.++.+.+++||++ .|..|.++|||..
T Consensus 156 ~v~~F~~YA~~~f~~fgd--rVk~W~T~NEp~~ 186 (481)
T 3qom_A 156 LIQFYLNFAKVCFERYRD--KVTYWMTFNEINN 186 (481)
T ss_dssp HHHHHHHHHHHHHHHTTT--TCCEEEEETTGGG
T ss_pred HHHHHHHHHHHHHHHhCC--cCCEEEEccCccH
Confidence 899999999999999998 7888999999974
|
| >3ptm_A Beta-glucosidase OS4BGlu12; beta-alpha barrel, glycosidase, hydrolase; HET: G2F; 2.40A {Oryza sativa} PDB: 3ptk_A* 3ptq_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.1e-15 Score=163.58 Aligned_cols=160 Identities=16% Similarity=0.256 Sum_probs=122.9
Q ss_pred CceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
-.|| -..-||++|.||+| +.+.||+|+......+. .+.++...+.|. +||+.| ++|+++||++|+
T Consensus 36 ~~Fl----wG~AtaA~QiEGa~~edGkg~SiWD~~~~~~p~---~i~~~~~gd~A~----D~Yhry--kEDi~Lm~elG~ 102 (505)
T 3ptm_A 36 KGFI----FGTASSSYQYEGGAAEGGRGPSIWDTFTHQHPE---KIADRSNGDVAS----DSYHLY--KEDVRLMKDMGM 102 (505)
T ss_dssp TTCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTC
T ss_pred CCCE----EEEEChhHhhcCCcCCCCCcCchhhhhhhcCCC---cccCCCCCCccc----cHHHHH--HHHHHHHHHcCC
Confidence 3677 34678899999999 45889999864321010 111222234566 899888 999999999999
Q ss_pred CEEEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQE 270 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~ 270 (535)
|++|++|.| .++.|.+. +.+++..+++++++|+.|.++||.++|+|||. +.+..... +..|. ++.++.
T Consensus 103 ~~yRfSIsW-sRI~P~g~~~g~vN~~Gl~fY~~lid~l~~~GIeP~VTL~Hw-------DlP~~L~~~yGGW~nr~~v~~ 174 (505)
T 3ptm_A 103 DAYRFSISW-TRILPNGSLRGGVNKEGIKYYNNLINELLSKGVQPFITLFHW-------DSPQALEDKYNGFLSPNIIND 174 (505)
T ss_dssp SEEEEECCH-HHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHH
T ss_pred CEEEeeccH-HHcCcCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCC-------CCcHHHHHhcCCcCCHHHHHH
Confidence 999999986 78888763 35899999999999999999999999999874 22211111 24555 788999
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 271 TVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
|.++.+.+++||+| .|..|.++|||..
T Consensus 175 F~~YA~~~f~~fgD--rVk~W~T~NEp~~ 201 (505)
T 3ptm_A 175 FKDYAEICFKEFGD--RVKNWITFNEPWT 201 (505)
T ss_dssp HHHHHHHHHHHHTT--TCCEEEEEECHHH
T ss_pred HHHHHHHHHHHhCc--cCceEEEecCcch
Confidence 99999999999999 7888999999963
|
| >2e9l_A Cytosolic beta-glucosidase; novel cytosolic neutral beta-glycosylceramidase, hydrolase; HET: BGC PLM OLA; 1.60A {Homo sapiens} PDB: 2e9m_A* 2zox_A* 2jfe_X* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.9e-15 Score=160.60 Aligned_cols=154 Identities=20% Similarity=0.295 Sum_probs=117.2
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+| +.+.||+|+...... . + ...++-..+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 11 ~Ataa~QiEGa~~~dGkg~SiwD~~~~~~-~-~-~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R~sisW- 80 (469)
T 2e9l_A 11 AATAAYQVEGGWDADGKGPCVWDTFTHQG-G-E-RVFKNQTGDVAC----GSYTLW--EEDLKCIKQLGLTHYRFSLSW- 80 (469)
T ss_dssp EECCHHHHCCCTTGGGCCCBHHHHHHHHC-S-S-SSGGGCCSSSTT----CTTTCH--HHHHHHHHHHTCSEEEEECCH-
T ss_pred EecchhhhcCCcCCCCCcccceeecccCC-C-c-cccCCCCCcccc----cHHHHH--HHHHHHHHHhCCCeEEccccH-
Confidence 567889999999 348899998643211 0 0 111222334566 899988 999999999999999999965
Q ss_pred cccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 205 IAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 205 ~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|.+ .+.+++..+++++++|+.|.++||.++|+|++.. .+........|. ++..+.|.++.+.+++||
T Consensus 81 sRi~P~g~~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~H~d-------~P~~l~~~ggw~~r~~~~~f~~ya~~~~~~~ 153 (469)
T 2e9l_A 81 SRLLPDGTTGFINQKGIDYYNKIIDDLLKNGVTPIVTLYHFD-------LPQTLEDQGGWLSEAIIESFDKYAQFCFSTF 153 (469)
T ss_dssp HHHSTTSSTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHTTGGGSTHHHHHHHHHHHHHHHHH
T ss_pred hhcccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCC-------CCcchhhcCCCCCchHHHHHHHHHHHHHHHh
Confidence 8888887 2458999999999999999999999999997531 110000112444 678999999999999999
Q ss_pred CCCCcEEEEEeecCCCC
Q 046395 283 ADHPSLVAIELMNEPKA 299 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~ 299 (535)
++ .|..|.++|||..
T Consensus 154 gd--~V~~W~t~NEp~~ 168 (469)
T 2e9l_A 154 GD--RVKQWITINEANV 168 (469)
T ss_dssp TT--TCCEEEEESCHHH
T ss_pred cC--cCCEEEEccCcch
Confidence 99 4899999999963
|
| >4a3y_A Raucaffricine-O-beta-D-glucosidase; hydrolase, alkaloid; 2.15A {Rauvolfia serpentina} PDB: 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.2e-15 Score=165.18 Aligned_cols=159 Identities=17% Similarity=0.238 Sum_probs=123.9
Q ss_pred CceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
-.|| -..-||++|.||+| +.+.||+|+......+. ....+...+.|. +||+.| ++|+++||++|+
T Consensus 24 ~~Fl----wG~AtaA~QiEGa~~~dGkg~SiwD~~~~~~p~---~~~~~~~gdvA~----D~Yhry--~EDi~Lm~elG~ 90 (540)
T 4a3y_A 24 ADFI----MGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPD---MIRGGTNGDVAV----DSYHLY--KEDVNILKNLGL 90 (540)
T ss_dssp TTCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSGGGCCTTTTT----CHHHHH--HHHHHHHHHHTC
T ss_pred CCCe----EeeechHhhhcCCcCCCCCcccHHHhhhccCCC---cccCCCCCCccc----chhHhh--HHHHHHHHHcCC
Confidence 3577 34668899999999 45789999864322111 112333455676 899988 999999999999
Q ss_pred CEEEeCCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKP--PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQE 270 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~--~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~ 270 (535)
|+.|++|.| .++.|+. .++.++..+++++++|+.|.++||.++|+|||. +.+..... +..|. ++.++.
T Consensus 91 ~~yRfSIsW-sRI~P~G~~~g~~N~~Gl~fY~~lid~l~~~GIeP~VTL~H~-------dlP~~L~~~yGGW~nr~~v~~ 162 (540)
T 4a3y_A 91 DAYRFSISW-SRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHW-------DVPQALEDEYGGFLSPRIVDD 162 (540)
T ss_dssp SEEEEECCH-HHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHH
T ss_pred CEEEeeccH-hhcccCCCCCCCCCHHHHHHHHHHHHHHHHcCCccceeccCC-------CCcHHHHhccCCcCChHHHHH
Confidence 999999997 7888864 234789999999999999999999999999984 32221111 24565 789999
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 271 TVAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
|+++.+.+++||+| .|-.|-++|||.
T Consensus 163 F~~Ya~~~f~~fgd--rVk~W~T~NEP~ 188 (540)
T 4a3y_A 163 FCEYAELCFWEFGD--RVKHWMTLNEPW 188 (540)
T ss_dssp HHHHHHHHHHHHTT--TCCEEEEEECHH
T ss_pred HHHHHHHHHHHhcc--ccCEeeEccccH
Confidence 99999999999999 788899999995
|
| >4atd_A Raucaffricine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.10A {Rauvolfia serpentina} PDB: 4a3y_A 3u5u_A 3u57_A 3u5y_A* | Back alignment and structure |
|---|
Probab=99.53 E-value=1.3e-15 Score=162.85 Aligned_cols=158 Identities=17% Similarity=0.237 Sum_probs=121.7
Q ss_pred ceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-||++|.||+| +.+.||+|+......+. .+......+.|. +||+.| ++|+++||++|+|
T Consensus 25 ~Fl----wG~AtaAyQiEGa~~edGkg~SiWD~~~~~~p~---~i~~~~~gd~A~----D~YhrY--kEDi~Lm~elG~~ 91 (513)
T 4atd_A 25 DFI----MGTGSSAYQIEGGARDGGRGPSIWDTFTHRRPD---MIRGGTNGDVAV----DSYHLY--KEDVNILKNLGLD 91 (513)
T ss_dssp TCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSGGGCCTTTTT----CHHHHH--HHHHHHHHHHTCS
T ss_pred CCE----EEEechhhhhcCCcCCCCCcCchhhhhhhcCCC---cccCCCCCCccc----chHHHH--HHHHHHHHHcCCC
Confidence 566 33567899999999 45889999864321111 112223345566 899888 9999999999999
Q ss_pred EEEeCCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKP--PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQET 271 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~--~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~~~ 271 (535)
++|++|.| .++.|.+ .+++++..+++++++|+.|.++||.++|+|+|. +.+.... .+..|. ++.++.|
T Consensus 92 ~yRfSIsW-sRI~P~g~~~g~~N~~Gl~~Y~~lid~l~~~GI~P~VTL~H~-------dlP~~L~~~yGGW~nr~~v~~F 163 (513)
T 4atd_A 92 AYRFSISW-SRVLPGGRLSGGVNKEGINYYNNLIDGLLANGIKPFVTLFHW-------DVPQALEDEYGGFLSPRIVDDF 163 (513)
T ss_dssp EEEEECCH-HHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTTHHHHH
T ss_pred EEEEeCcH-HHcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEecCC-------CCcHHHHHHcCCcCCHHHHHHH
Confidence 99999976 7888876 245889999999999999999999999999874 2221111 123454 6889999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 272 VAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 272 ~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
.++.+.+++||++ .|..|.++|||.
T Consensus 164 ~~YA~~~f~~fgd--rVk~WiT~NEp~ 188 (513)
T 4atd_A 164 CEYAELCFWEFGD--RVKHWMTLNEPW 188 (513)
T ss_dssp HHHHHHHHHHHTT--TCCEEEEEECHH
T ss_pred HHHHHHHHHHhcC--cCceEEEccCcc
Confidence 9999999999999 788899999996
|
| >1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A | Back alignment and structure |
|---|
Probab=99.53 E-value=1.6e-15 Score=162.62 Aligned_cols=160 Identities=15% Similarity=0.279 Sum_probs=119.1
Q ss_pred CceEEEecccEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
-.|| -..-||++|.||+|. .+.||+|+........ ....+-..+.|. +||+.| ++|+++||++|+
T Consensus 26 ~~Fl----wG~AtsA~QiEGa~~edGkg~SiwD~~~~~~p~---~i~~~~~~~~A~----D~Y~~~--~eDi~lm~~~G~ 92 (512)
T 1v08_A 26 SDFT----FGAATSAYQIEGAWNEDGKGESNWDHFCHNHPE---RILDGSNSDIGA----NSYHMY--KTDVRLLKEMGM 92 (512)
T ss_dssp TTCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSTTSCCCSSTT----CHHHHH--HHHHHHHHHTTC
T ss_pred CCCE----EEEecchHhhcCCcCCCCCcCcceeeecccCCC---cccCCCCCcccc----chHHHH--HHHHHHHHHhCC
Confidence 3576 335678999999993 4789999864321010 111111234565 888887 999999999999
Q ss_pred CEEEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-h---HH
Q 046395 195 NAVRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-D---SD 267 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~---~~ 267 (535)
|++|+.|.| .++.|.+. +.+++..+++++++|+.|.++||.++|+|++.. .+..... +..|. + ..
T Consensus 93 ~~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~yggw~~r~~c~~ 164 (512)
T 1v08_A 93 DAYRFSISW-PRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIFHWD-------VPQALEEKYGGFLDKSHKSI 164 (512)
T ss_dssp SEEEEECCH-HHHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHHHCGGGCTTSSHH
T ss_pred CeEecccCH-hhhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCC-------CCHHHHhhCCCCCCccccch
Confidence 999999965 88899872 358999999999999999999999999997641 1100000 12343 4 78
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 268 IQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 268 ~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
.+.|.++.+.+++||+++ |..|.++|||..
T Consensus 165 ~~~f~~ya~~~~~~~gd~--V~~W~t~NEp~~ 194 (512)
T 1v08_A 165 VEDYTYFAKVCFDNFGDK--VKNWLTFNDPQT 194 (512)
T ss_dssp HHHHHHHHHHHHHHHTTT--CCEEEEEECHHH
T ss_pred HHHHHHHHHHHHHHhCCc--ceEEEEcccchh
Confidence 999999999999999995 999999999963
|
| >1wcg_A Thioglucosidase, myrosinase; aphid, beta-glucosidase, insect, beta-barrel, hydrolase, glycosidase; 1.10A {Brevicoryne brassicae} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.53 E-value=1.7e-15 Score=160.59 Aligned_cols=153 Identities=16% Similarity=0.250 Sum_probs=116.3
Q ss_pred EEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+|. .+.||+|+........ .+..+-..+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 13 ~Ataa~QiEGa~~~dGkg~SiwD~~~~~~~~---~~~~~~~~~~a~----D~Y~~~--~eDi~lm~~~G~~~~R~sisW- 82 (464)
T 1wcg_A 13 TSTASYQIEGGWNEDGKGENIWDRLVHTSPE---VIKDGTNGDIAC----DSYHKY--KEDVAIIKDLNLKFYRFSISW- 82 (464)
T ss_dssp EECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH-
T ss_pred EeChhHhhcCCcCCCCCcCchheeecccCCC---cccCCCCCcccc----chHHhh--HHHHHHHHHhCCCeEEecccH-
Confidence 5678899999993 4789999864321010 111112234566 888887 999999999999999999965
Q ss_pred cccCCCCC-CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 205 IAYDPKPP-KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 205 ~~~~p~~~-~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|.+. +.+++..+++++++|+.|.++||.++|+|++.. .+.....+..|. ++..+.|.++.+.+++||
T Consensus 83 sRi~P~g~~g~~n~~Gl~~y~~~id~l~~~GI~p~vtL~H~d-------~P~~L~~~ggw~~r~~~~~f~~ya~~~~~~~ 155 (464)
T 1wcg_A 83 ARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHWD-------LPQYLQDLGGWVNPIMSDYFKEYARVLFTYF 155 (464)
T ss_dssp HHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHTTGGGSTTHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCC-------CCcchhhcCCCCChhHHHHHHHHHHHHHHHh
Confidence 88899872 458999999999999999999999999997641 111001122454 678999999999999999
Q ss_pred CCCCcEEEEEeecCCC
Q 046395 283 ADHPSLVAIELMNEPK 298 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~ 298 (535)
++ .|..|.++|||.
T Consensus 156 gd--~V~~W~t~NEp~ 169 (464)
T 1wcg_A 156 GD--RVKWWITFNEPI 169 (464)
T ss_dssp TT--TCCEEEEEECHH
T ss_pred CC--cCcEEEEccccc
Confidence 99 489999999996
|
| >2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=3.7e-15 Score=158.12 Aligned_cols=158 Identities=21% Similarity=0.337 Sum_probs=119.5
Q ss_pred ceEEEecccEEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-||++|.||+| +.+.||+|+..... .. ....+-..+.|. +||+.| ++|+++||++|+|
T Consensus 12 ~Fl----wG~AtaA~QiEGa~~edGkg~SiwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~y--~eDi~lm~~~G~~ 77 (465)
T 2e3z_A 12 SFV----WGYATAAYQIEGSPDKDGREPSIWDTFCKA-PG---KIADGSSGDVAT----DSYNRW--REDVQLLKSYGVK 77 (465)
T ss_dssp TCE----EEEECCHHHHCCCTTGGGCCCBHHHHHTTS-TT---SSTTSCCSSSTT----CTTTTH--HHHHHHHHHTTCS
T ss_pred CCE----EeEeccHHHhCCCcCCCCCcCeeeeeeccC-CC---cccCCCCCcccc----chHHHh--HHHHHHHHHhCCC
Confidence 566 33567889999999 34889999864321 11 011222234566 899988 9999999999999
Q ss_pred EEEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC--hHHHHH
Q 046395 196 AVRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS--DSDIQE 270 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~--~~~~~~ 270 (535)
++|++|.| .++.|.+. +.+++..++.+|++|+.|.++||.++|+|++.. .+..... +..|. +...+.
T Consensus 78 ~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~yggw~~~~~~~~~ 149 (465)
T 2e3z_A 78 AYRFSLSW-SRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTLYHWD-------LPQALDDRYGGWLNKEEAIQD 149 (465)
T ss_dssp EEEEECCH-HHHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEEESSC-------CBHHHHHHHCGGGSHHHHHHH
T ss_pred ceecccch-HHhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCc-------CCHHHHhhcCCCCCCcchHHH
Confidence 99999965 88899873 458999999999999999999999999997631 1100000 12342 577899
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 271 TVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
|.++.+.+++||++ .|..|.++|||..
T Consensus 150 f~~ya~~~~~~~gd--~V~~W~t~NEp~~ 176 (465)
T 2e3z_A 150 FTNYAKLCFESFGD--LVQNWITFNEPWV 176 (465)
T ss_dssp HHHHHHHHHHHHTT--TCCEEEEEECHHH
T ss_pred HHHHHHHHHHHhCC--CceEEEEccCchH
Confidence 99999999999999 4899999999974
|
| >2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=2.9e-15 Score=161.47 Aligned_cols=160 Identities=16% Similarity=0.250 Sum_probs=120.1
Q ss_pred CceEEEecccEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
-.|| -..-||++|.||+|. .+.||+|+........ .+..+-..+.|. +||+.| ++|+++||++|+
T Consensus 76 ~~Fl----wG~ATaAyQiEGa~~edGkg~SiWD~f~~~~p~---~i~~~~~gdvA~----D~Y~~y--~eDi~lm~~lG~ 142 (565)
T 2dga_A 76 KDFL----FGASTSAYQIEGAWNEDGKGPSTWDHFCHTYPE---RISDMTNGDVAA----NSYHLY--EEDVKALKDMGM 142 (565)
T ss_dssp TTCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSTTSCCTTTTT----CHHHHH--HHHHHHHHHHTC
T ss_pred CCCE----EeEeCchHhhcCCcCCCCCcCeeeeeecccCCC---cccCCCCCcccc----chHHHH--HHHHHHHHHhCC
Confidence 3566 335678999999993 4789999864321010 111222234566 888888 999999999999
Q ss_pred CEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQETV 272 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~~ 272 (535)
|++|++|.| .++.|.+.+.+++..+++++++|+.|.++||.+||+|++.. .+..... +..|. ++..+.|.
T Consensus 143 ~~~RfsIsW-sRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~yggw~~r~~~~~F~ 214 (565)
T 2dga_A 143 KVYRFSISW-SRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTIWHWD-------TPQALEDKYGGFLNRQIVDDYK 214 (565)
T ss_dssp SEEEEECCH-HHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHHHCGGGSTHHHHHHH
T ss_pred CeEEecccH-HHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCC-------CcHHHHHhcCCCCCchHHHHHH
Confidence 999999965 88899873458999999999999999999999999997641 1110001 13454 67899999
Q ss_pred HHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 273 AIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 273 ~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
++.+.+++||++ .|..|.++|||..
T Consensus 215 ~ya~~~~~~~gd--~V~~W~t~NEp~~ 239 (565)
T 2dga_A 215 QFAEVCFKNFGD--RVKNWFTFNEPHT 239 (565)
T ss_dssp HHHHHHHHHHTT--TCCEEEEEECHHH
T ss_pred HHHHHHHHHhCC--CCceEEEeccchh
Confidence 999999999999 4999999999963
|
| >1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A* | Back alignment and structure |
|---|
Probab=99.51 E-value=3.2e-15 Score=161.29 Aligned_cols=160 Identities=16% Similarity=0.286 Sum_probs=120.1
Q ss_pred CceEEEecccEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
-.|| -..-||++|.||+|. .+.||+|+........ ...++-..+.|. +||+.| ++|+++||++|+
T Consensus 78 ~~Fl----wG~ATsAyQiEGa~~edGkg~SiWD~f~~~~p~---~i~~~~~gdvA~----D~Yh~y--~eDi~lm~~lG~ 144 (565)
T 1v02_A 78 PSFL----FGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPE---WIVDRSNGDVAA----DSYHMY--AEDVRLLKEMGM 144 (565)
T ss_dssp TTCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSTTSCCSSSTT----CHHHHH--HHHHHHHHHTTC
T ss_pred CCCE----EEEEchHHHhcCCcCCCCCcCeeeeeecccCCC---cccCCCCCcccc----cHHHHH--HHHHHHHHHhCC
Confidence 3577 335678999999993 4789999864321010 111222234566 888888 999999999999
Q ss_pred CEEEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQE 270 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~~ 270 (535)
|++|+.|.| .++.|.+. +.+++..++++|++|+.|.++||.++|+|++.. .+.... .+..|. ++..+.
T Consensus 145 ~~~R~sisW-sRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~yggw~~r~~~~~ 216 (565)
T 1v02_A 145 DAYRFSISW-PRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHWD-------TPQALVDAYGGFLDERIIKD 216 (565)
T ss_dssp SEEEEECCH-HHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHHHCGGGSTHHHHH
T ss_pred CeEEcccCH-HHhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCC-------CCHHHHhhcCCCCCchHHHH
Confidence 999999965 88899872 458999999999999999999999999997641 111000 112454 678999
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 271 TVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
|.++.+.+++||++ .|..|.++|||..
T Consensus 217 f~~ya~~~~~~~gd--~V~~W~t~NEp~~ 243 (565)
T 1v02_A 217 YTDFAKVCFEKFGK--TVKNWLTFNEPET 243 (565)
T ss_dssp HHHHHHHHHHHHTT--TCCEEEEEECHHH
T ss_pred HHHHHHHHHHHhCC--cceEEEEccCchh
Confidence 99999999999999 4999999999963
|
| >1cbg_A Cyanogenic beta-glucosidase; hydrolase (O-glycosyl); 2.15A {Trifolium repens} SCOP: c.1.8.4 | Back alignment and structure |
|---|
Probab=99.50 E-value=3.2e-15 Score=159.52 Aligned_cols=159 Identities=16% Similarity=0.230 Sum_probs=118.8
Q ss_pred ceEEEecccEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-||++|.||+|. .+.||+|+........ ....+-..+.|. +||+.| ++|+++||++|+|
T Consensus 22 ~Fl----wG~AtaA~QiEGa~~edGkg~SiwD~~~~~~p~---~~~~~~~~~~A~----D~Y~~~--~eDi~lm~~~G~~ 88 (490)
T 1cbg_A 22 GFV----FGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPE---KIKDRTNGDVAI----DEYHRY--KEDIGIMKDMNLD 88 (490)
T ss_dssp TCE----EEEECCHHHHCCCSSSTTCCCBHHHHHHHHCGG---GSTTCCCSSSTT----CHHHHH--HHHHHHHHHTTCC
T ss_pred CCE----EEEecchhhhcCCcCCCCCcCeeeeeecccCCC---cccCCCCCcccc----ChHHHH--HHHHHHHHHhCCC
Confidence 566 335678999999993 4789999864321010 111212234566 888888 9999999999999
Q ss_pred EEEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQET 271 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~ 271 (535)
++|++|.| .++.|.+. +.+++..+++++++|+.|.++||.++|+|++.. .+..... +..|. +...+.|
T Consensus 89 ~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~yggw~~~~~~~~f 160 (490)
T 1cbg_A 89 AYRFSISW-PRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHWD-------VPQALEDEYRGFLGRNIVDDF 160 (490)
T ss_dssp EEEEECCH-HHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHHHCGGGSTTHHHHH
T ss_pred eEEecccH-HHhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCC-------CCHhHHhhcCCcCCchHHHHH
Confidence 99999965 88899872 458999999999999999999999999997641 1100000 12343 5689999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 272 VAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 272 ~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
.++.+.+++||++ .|..|.++|||..
T Consensus 161 ~~ya~~~~~~~gd--~V~~W~t~NEp~~ 186 (490)
T 1cbg_A 161 RDYAELCFKEFGD--RVKHWITLNEPWG 186 (490)
T ss_dssp HHHHHHHHHHHTT--TCCEEEEEECHHH
T ss_pred HHHHHHHHHHhCC--cceEEEEccCchh
Confidence 9999999999999 4899999999963
|
| >1e4m_M Myrosinase MA1; hydrolase, family 1 glycosyl hydrolase, glucosinolate, TIM B; HET: NAG FUC BMA MAN; 1.2A {Sinapis alba} SCOP: c.1.8.4 PDB: 1e6q_M* 1e6s_M* 1e6x_M* 1e70_M* 1e71_M* 1e72_M* 1e73_M* 1w9b_M* 1w9d_M* 2wxd_M* 1dwa_M* 1dwf_M* 1dwg_M* 1dwh_M* 1dwi_M* 1dwj_M* 1myr_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=7.1e-15 Score=157.18 Aligned_cols=159 Identities=11% Similarity=0.151 Sum_probs=119.7
Q ss_pred CceEEEecccEEecCCCCCCCcccCCcccceecccccccccchh-hhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQI-TNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~-~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
-.|| -..-||++|.||+ +.+.||+|+........ .. .++-..+.|. +||+.| ++|+++||++|+|
T Consensus 27 ~~Fl----wG~AtaA~QiEGa-dGkg~SiWD~~~~~~~~---~~~~~~~~~~~A~----D~Y~~~--~eDi~lm~~lG~~ 92 (501)
T 1e4m_M 27 SDFI----FGVASSAYQIEGT-IGRGLNIWDGFTHRYPN---KSGPDHGNGDTTC----DSFSYW--QKDIDVLDELNAT 92 (501)
T ss_dssp TTCE----EEEECCHHHHSCS-TTSCCBHHHHHHHHSHH---HHCTTCCCSSSTT----CHHHHH--HHHHHHHHHHTCS
T ss_pred CCCE----EEEeChhhhcCCC-CCCCCchheeeccccCC---ccccCCCCCcccc----cHHHHH--HHHHHHHHHhCCC
Confidence 3576 3356788999988 77899999864320000 01 1112234566 888888 9999999999999
Q ss_pred EEEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQET 271 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~~ 271 (535)
++|++|.| .++.|.+. +.+++..+++++++|+.|.++||.+||+|++.. .+..... +..|. ++..+.|
T Consensus 93 ~~R~sisW-sRi~P~g~~~g~~n~~G~~~y~~~id~l~~~GI~p~vtL~H~d-------~P~~L~~~yggw~~r~~~~~f 164 (501)
T 1e4m_M 93 GYRFSIAW-SRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHWD-------LPQTLQDEYEGFLDPQIIDDF 164 (501)
T ss_dssp EEEEECCH-HHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHHHCGGGSTHHHHHH
T ss_pred eEEccccH-HhhccCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCc-------CCHHHHHhcCCCCCchHHHHH
Confidence 99999965 88889862 458999999999999999999999999997641 1110000 12454 6789999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 272 VAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 272 ~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
.++.+.+++||++ .|..|.++|||..
T Consensus 165 ~~ya~~~~~~~gd--~V~~W~t~NEp~~ 190 (501)
T 1e4m_M 165 KDYADLCFEEFGD--SVKYWLTINQLYS 190 (501)
T ss_dssp HHHHHHHHHHHTT--TCCEEEEESCTTH
T ss_pred HHHHHHHHHHhCC--CCCEEEEecCchh
Confidence 9999999999999 4899999999974
|
| >2jf7_A Strictosidine-O-beta-D-glucosidase; alkaloid, hydrolase; 2.48A {Rauvolfia serpentina} PDB: 2jf6_A | Back alignment and structure |
|---|
Probab=99.48 E-value=5e-15 Score=159.10 Aligned_cols=160 Identities=17% Similarity=0.289 Sum_probs=119.9
Q ss_pred CceEEEecccEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCC
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~ 194 (535)
-.|| -..-||++|.||+|. .+.||+|+........ ....+-..+.|. +||+.| ++|+++||++|+
T Consensus 45 ~~Fl----wG~AtaA~QiEGa~~edGkg~SiWD~f~~~~p~---~i~~~~~gd~A~----D~Y~~y--~eDi~lm~~lG~ 111 (532)
T 2jf7_A 45 QDFI----FGAGGSAYQCEGAYNEGNRGPSIWDTFTQRSPA---KISDGSNGNQAI----NCYHMY--KEDIKIMKQTGL 111 (532)
T ss_dssp TTCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTC
T ss_pred CCCE----EEEecchHhhcCCcCCCCCcCeeeeEccccCCC---cccCCCCcchhh----hHHHHH--HHHHHHHHHcCC
Confidence 3576 335678899999993 4789999864321010 011111234566 888888 999999999999
Q ss_pred CEEEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCCC-hHHHHH
Q 046395 195 NAVRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEWS-DSDIQE 270 (535)
Q Consensus 195 N~VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W~-~~~~~~ 270 (535)
|++|++|.| .++.|.+. +.+++..++++|++|+.|.++||.++|+|++.. .+..... +..|. ++..+.
T Consensus 112 ~~~R~sisW-sRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~yggw~~r~~~~~ 183 (532)
T 2jf7_A 112 ESYRFSISW-SRVLPGGRLAAGVNKDGVKFYHDFIDELLANGIKPSVTLFHWD-------LPQALEDEYGGFLSHRIVDD 183 (532)
T ss_dssp SEEEEECCH-HHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHHHCGGGSTHHHHH
T ss_pred CeEeccccH-HHhccCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCC-------CCHHHHhhcCCCCCchHHHH
Confidence 999999965 88888872 458999999999999999999999999997641 1110001 13454 678999
Q ss_pred HHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 271 TVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
|.++.+.+++||++ .|..|.++|||..
T Consensus 184 f~~ya~~~~~~~gd--~V~~W~t~NEp~~ 210 (532)
T 2jf7_A 184 FCEYAEFCFWEFGD--KIKYWTTFNEPHT 210 (532)
T ss_dssp HHHHHHHHHHHHGG--GCSEEEEEECHHH
T ss_pred HHHHHHHHHHHhCC--cCceEEEccCchh
Confidence 99999999999999 5899999999963
|
| >3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.1e-14 Score=154.89 Aligned_cols=152 Identities=13% Similarity=0.162 Sum_probs=115.4
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+| +.+.||+|+..... .. ....+-..+.|. +||+.| ++|+++||++|+|++|++|.|
T Consensus 17 ~AtaA~QiEGa~~edGkg~SiwD~~~~~-~~---~~~~~~~~~~a~----D~Y~~y--~eDi~lm~~lG~~~~R~sisW- 85 (473)
T 3ahy_A 17 FATAAYQIEGAVDQDGRGPSIWDTFCAQ-PG---KIADGSSGVTAC----DSYNRT--AEDIALLKSLGAKSYRFSISW- 85 (473)
T ss_dssp EECCHHHHCCCTTGGGCCCBHHHHHHHS-TT---SSTTSCCSSSTT----CGGGCH--HHHHHHHHHHTCSEEEEECCH-
T ss_pred EecchhhhCCCcCCCCCcCeeeEEeecc-CC---cccCCCCCcccc----chHHHH--HHHHHHHHHhCCCeEEccccH-
Confidence 567889999999 34889999864321 00 011112234566 899988 999999999999999999965
Q ss_pred cccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC-CCCC-C-hHHHHHHHHHHHHHH
Q 046395 205 IAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG-FQEW-S-DSDIQETVAIIDFLA 279 (535)
Q Consensus 205 ~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~-~~~W-~-~~~~~~~~~~~~~la 279 (535)
.++.|.+. +.+++..++.+|++|+.|.++||.+||+|++.. .+..... +..| + +...+.|.++.+.++
T Consensus 86 sRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~H~d-------~P~~L~~~yggw~~~~~~~~~f~~ya~~~~ 158 (473)
T 3ahy_A 86 SRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLFHWD-------LPEGLHQRYGGLLNRTEFPLDFENYARVMF 158 (473)
T ss_dssp HHHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESSC-------CBHHHHHHHCGGGCTTHHHHHHHHHHHHHH
T ss_pred HhhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCc-------CCHHHHhhcCCCcCchhhHHHHHHHHHHHH
Confidence 88899873 458999999999999999999999999997641 1100000 1233 2 478999999999999
Q ss_pred HHhCCCCcEEEEEeecCCCC
Q 046395 280 SRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 280 ~ry~~~p~V~~~el~NEP~~ 299 (535)
++| + .|..|.++|||..
T Consensus 159 ~~~-d--rV~~W~t~NEp~~ 175 (473)
T 3ahy_A 159 RAL-P--KVRNWITFNEPLC 175 (473)
T ss_dssp HHC-T--TCCEEEEEECHHH
T ss_pred HHh-C--cCCEEEecCchhh
Confidence 999 7 6999999999963
|
| >1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=1.3e-12 Score=141.17 Aligned_cols=256 Identities=13% Similarity=0.198 Sum_probs=143.1
Q ss_pred hhhHhHHhhhCccchHHHHHHHH-HcCCCEEEeCCcccccc-----CC--CCCC-CCccchHHHHHHHHHHHHHcCCEEE
Q 046395 168 KAAKLMRDHWKSYITEEDFKFMS-QNGLNAVRIPVGWWIAY-----DP--KPPK-PFVGGSLQALDNAFRWAQKYGMKVI 238 (535)
Q Consensus 168 ~a~~~~~~hw~~~ite~D~~~ik-~~G~N~VRipv~~w~~~-----~p--~~~~-~~~~~~l~~ld~~i~~a~~~Gi~VI 238 (535)
.+...++.+| +++++.|+ ++|++.||+++.|...+ ++ .++. .| .+..+|+++++|+++||+++
T Consensus 26 ~~~~~~r~~~-----~e~l~~~~~~~G~~~vR~~~~w~D~~~~~~~~~~~~~g~~~~---n~~~~D~~~~~~~~~Gi~p~ 97 (503)
T 1w91_A 26 RLGLALQKEY-----LDHLKLVQEKIGFRYIRGHGLLSDDVGIYREVEIDGEMKPFY---NFTYIDRIVDSYLALNIRPF 97 (503)
T ss_dssp CGGGGGBHHH-----HHHHHHHHHHTCCSEEECSCTTSTTTCCEEEEESSSSEEEEE---CCHHHHHHHHHHHHTTCEEE
T ss_pred cchhhhCHHH-----HHHHHHHHHhcCCeEEEeccCcCCCceEeecccccCCCceee---ccHHHHHHHHHHHHCCCEEE
Confidence 3444455666 79999997 89999999998774211 11 0110 12 47899999999999999999
Q ss_pred EecCCCCCCCCCCCCCCCCCCCCCC----C-hHHHHHHH----HHHHHHHHHhCCCCcEE--EEEeecCCCCCC----CC
Q 046395 239 VDLHALRVSQNGSPHSGSRDGFQEW----S-DSDIQETV----AIIDFLASRYADHPSLV--AIELMNEPKAPD----LK 303 (535)
Q Consensus 239 ldlH~~pg~~ng~~~sg~~~~~~~W----~-~~~~~~~~----~~~~~la~ry~~~p~V~--~~el~NEP~~~~----~~ 303 (535)
|.+++.|.... ++.. ....| . ++..+.+. ++++.+.+||++. .|. .|+++|||.... .+
T Consensus 98 v~l~~~P~~~~----~~~~-~~~~w~~~~~~p~~~~~~~~~v~~~~~~~~~ryg~~-~V~~W~wev~NEp~~~~~~~~~~ 171 (503)
T 1w91_A 98 IEFGFMPKALA----SGDQ-TVFYWKGNVTPPKDYNKWRDLIVAVVSHFIERYGIE-EVRTWLFEVWNEPNLVNFWKDAN 171 (503)
T ss_dssp EEECSBCGGGB----SSCC-EETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHH-HHHTSEEEECSCTTSTTTSGGGC
T ss_pred EEEcCCcHHHh----CCCC-ceeecCCCCCCccCHHHHHHHHHHHHHHHHhhcCch-hhceeeEEEeeCCCCccCCCCCC
Confidence 99998664321 1100 00111 1 33445555 4455555777752 265 689999998631 25
Q ss_pred hHHHHHHHHHHHHHHHhcCCCcEEEEcCCCC--CCh-hhhhccc--CCCCcEEEEEeecCcCCCc-------cc-CCChh
Q 046395 304 LDSLKTYYKAGYDTVRKYSSSAYVILSNRLG--GEW-SELLSFA--SNLSRVVIDVHFYNLFWDN-------FN-KMSVQ 370 (535)
Q Consensus 304 ~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g--~~~-~~~~~~~--~~~~n~v~d~H~Y~~~~~~-------~~-~~~~~ 370 (535)
.+.+..++++++++||+++|+..|...+..+ ..| ..++... .+..-.++++|.|...... +. ....+
T Consensus 172 ~~~y~~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~g~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~ 251 (503)
T 1w91_A 172 KQEYFKLYEVTARAVKSVDPHLQVGGPAICGGSDEWITDFLHFCAERRVPVDFVSRHAYTSKAPHKKTFEYYYQELEPPE 251 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEEEEEECSSCTHHHHHHHHHHHHTTCCCCEEEEEEECBCSCSEECSSCEECCBCCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCeEEeeeccCCchHHHHHHHHHHHhCCCCCCEEEEeecCCCccccccccccccccCCHH
Confidence 6678999999999999999998763322111 122 2333211 2335678999999764320 00 01122
Q ss_pred hhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCH-HHH-HHHHHHHHHHHhhCCcceEEEeeee
Q 046395 371 QNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASK-RDY-QRFAEAQLDVYGRATFGWAYWAYKF 439 (535)
Q Consensus 371 ~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~-~~~-~~~~~~ql~~~~~~~~Gw~~W~~k~ 439 (535)
...+.+...+ +.+... ...+.|++|+|||..+....... +.+ ..|+...+......--+..||++..
T Consensus 252 ~~~~~i~~~~-~~~~~~-~~~~~pi~itE~g~~~~~~~~~~d~~~~A~~~~~~l~~~~~~v~~~~~w~~~D 320 (503)
T 1w91_A 252 DMLEQFKTVR-ALIRQS-PFPHLPLHITEYNTSYSPINPVHDTALNAAYIARILSEGGDYVDSFSYWTFSD 320 (503)
T ss_dssp HHHHHHHHHH-HHHHTS-SSTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred HHHHHHHHHH-HHHHhc-CCCCCcEEEeccCCCCCCCCCcccHHHhHHHHHHHHHHHhhhhheEEEEEEec
Confidence 2222222111 112111 11245699999998653221111 112 2343332222222223677899864
|
| >2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=5e-12 Score=136.65 Aligned_cols=216 Identities=14% Similarity=0.126 Sum_probs=129.4
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
.++|+++||++|+|+||+ | ..+|..+. |++++.|.++||+||+++|....+.. ...+
T Consensus 89 ~~rDi~LmK~~GiN~VRv----y-~~~P~~~~----------d~~ldl~~~~GIyVIle~~~p~~~i~--------~~~P 145 (555)
T 2w61_A 89 CLRDIPFLKMLGVNTLRV----Y-AIDPTKSH----------DICMEALSAEGMYVLLDLSEPDISIN--------RENP 145 (555)
T ss_dssp HHHHHHHHHHHTCSEEEE----C-CCCTTSCC----------HHHHHHHHHTTCEEEEESCBTTBSCC--------TTSC
T ss_pred HHHHHHHHHHcCCCEEEE----e-ccCCCCCh----------HHHHHHHHhcCCEEEEeCCCCCcccc--------cCCH
Confidence 389999999999999999 3 34443321 67899999999999999985311110 1122
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC---hHHHHHHHHHHHHHHHhcCCCc-EEEEcCCCCCCh
Q 046395 262 EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK---LDSLKTYYKAGYDTVRKYSSSA-YVILSNRLGGEW 337 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~---~~~~~~~~~~~~~aIR~~~p~~-~ii~~~~~g~~~ 337 (535)
.+.+...+.++.+++||++||+|++|.+.||+...... ...++..++++.+.||+.+++. +|-....-...+
T Consensus 146 ----~~~~~~~~r~~~~V~ry~nhP~Vi~W~vGNE~~~~~~~~~~~~y~~aa~r~~~~~lk~~d~R~IpVgy~~ad~~~~ 221 (555)
T 2w61_A 146 ----SWDVHIFERYKSVIDAMSSFPNLLGYFAGNQVTNDHTNTFASPFVKAAIRDAKEYISHSNHRKIPVGYSTNDDAMT 221 (555)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTCTTEEEEEEEESSSCSTTCGGGHHHHHHHHHHHHHHHHHSSSCCCCEEEEECCCTTT
T ss_pred ----HHHHHHHHHHHHHHHHcCCCCcEEEEEeCccccCCCccchhhHHHHHHHHHHHHHHHhcCCCcceeeccccccchh
Confidence 34456678899999999999999999999999863221 2456777788888999988654 222222100111
Q ss_pred -hhhhcccC--CCCcEEEEEeecCcCCC-cccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHH
Q 046395 338 -SELLSFAS--NLSRVVIDVHFYNLFWD-NFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRD 413 (535)
Q Consensus 338 -~~~~~~~~--~~~n~v~d~H~Y~~~~~-~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~ 413 (535)
..+.++.. .....++.+|.|..+.. .|. ......+ ...+.+ ...|+|++|||+.....+... +
T Consensus 222 r~~la~yl~c~~~~~D~~~~N~Y~w~g~s~f~----~sg~~~~-------~~~~~~-~~~Pi~vsEyG~~~~~pg~~~-E 288 (555)
T 2w61_A 222 RDNLARYFVCGDVKADFYGINMYEWCGYSTYG----TSGYRER-------TKEFEG-YPIPVFFSEFGCNLVRPRPFT-E 288 (555)
T ss_dssp HHHHHHHTTBTTCCCSCEEEEECCCCSSCCHH----HHSHHHH-------HHHHTT-CSSCEEEEEECCCSSSSCCCT-H
T ss_pred hHHHHHHhccCCCCcCEEEEeCCccccccccc----chhHHHH-------HHHhhC-CCCCEEEEeCCCccCCCCchH-H
Confidence 11222211 24567889999975421 111 0001111 112222 245699999998764222222 2
Q ss_pred HHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 414 YQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 414 ~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
++..+... +...-.|-+.|.|-.+
T Consensus 289 ~~a~y~~~---m~~~~sGG~Ife~~dE 312 (555)
T 2w61_A 289 VSALYGNK---MSSVWSGGLAYMYFEE 312 (555)
T ss_dssp HHHHTSHH---HHTTCCEEEESCSBCC
T ss_pred HHHHHhhc---ccccccceEEEEEecc
Confidence 33222211 2222347789998876
|
| >3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.40 E-value=3.1e-11 Score=134.68 Aligned_cols=206 Identities=14% Similarity=0.180 Sum_probs=136.2
Q ss_pred chHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGF 260 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~ 260 (535)
..++||+.||++|+|+||+.- + +.. ++++++|.++||+|+.++..... ...
T Consensus 319 ~~~~dl~l~k~~G~N~iR~~h-~-------p~~----------~~~~dlcDe~Gi~V~~E~~~~~~-----------~~~ 369 (692)
T 3fn9_A 319 HHDFDLAAIMDVGATTVRFAH-Y-------QQS----------DYLYSRCDTLGLIIWAEIPCVNR-----------VTG 369 (692)
T ss_dssp HHHHHHHHHHHHTCCEEEETT-S-------CCC----------HHHHHHHHHHTCEEEEECCCBSC-----------CCS
T ss_pred HHHHHHHHHHHCCCCEEEecC-C-------CCc----------HHHHHHHHHCCCEEEEcccccCC-----------CCC
Confidence 347999999999999999932 1 111 56899999999999999863210 000
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCChhhh
Q 046395 261 QEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSEL 340 (535)
Q Consensus 261 ~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~~~~~ 340 (535)
+. .+.+.+.++.|.+|+++||+|++|.+.||+... .+....+++++++.+|+.||.+++..+..+. .....
T Consensus 370 ----~~-~~~~~~~~~~~v~r~rNHPSIi~Ws~gNE~~~~---~~~~~~~~~~l~~~~k~~DptRpvt~~~~~~-~~~~~ 440 (692)
T 3fn9_A 370 ----YE-TENAQSQLRELIRQSFNHPSIYVWGLHNEVYQP---HEYTAALTRSLHDLAKTEDPDRYTVSVNGYG-HMDHP 440 (692)
T ss_dssp ----SC-HHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSS---HHHHHHHHHHHHHHHHHHCTTSEEEEEESSS-CTTCT
T ss_pred ----HH-HHHHHHHHHHHHHHhcCCCcceEEEeccccCcc---cccHHHHHHHHHHHHHHHCCCCCEEEeCCCc-ccccc
Confidence 24 677889999999999999999999999999752 3556789999999999999999988765441 11110
Q ss_pred hcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhh-cCCCcEEEeccCCCcCC------C------
Q 046395 341 LSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTT-SDGPLSFVGEWSCEWEA------E------ 407 (535)
Q Consensus 341 ~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~-~~~p~v~vGEfg~~~~~------~------ 407 (535)
......++++|.|..+.. . ..+....++ ..+.+ ....|++++|||+.... .
T Consensus 441 ----~~~~~Dv~~~n~Y~gWY~---~-~~~~~~~~~--------~~~~~~~p~kPii~sEyG~~~~~g~~~~~~~~~~~~ 504 (692)
T 3fn9_A 441 ----VNLNADIQGMNRYFGWYE---K-KIQDIKPWV--------EQLEKDYPYQKLMLTEYGADANLAHQTEYLGDALNW 504 (692)
T ss_dssp ----TCSSSSEEEEECCBTTTB---S-CGGGHHHHH--------HHHHHHCTTCCEEEEECCCCCBTTCCCSCCCSCCCS
T ss_pred ----ccccCCcccccccccccC---C-chHHHHHHH--------HHHHHHhcCccEEEEEEcCCcccccccccccccccc
Confidence 123457889998864311 1 122211111 11211 22456999999974211 0
Q ss_pred CC--CHHHHH-HHHHHHHHHHhhC--CcceEEEeeeeC
Q 046395 408 GA--SKRDYQ-RFAEAQLDVYGRA--TFGWAYWAYKFA 440 (535)
Q Consensus 408 ~~--~~~~~~-~~~~~ql~~~~~~--~~Gw~~W~~k~~ 440 (535)
+. ..+.++ .+.+..++++.+. -+|-+.|++-.-
T Consensus 505 ~~~~~see~Q~~~~~~~~~~~~~~p~~~G~fvW~~~D~ 542 (692)
T 3fn9_A 505 GKPFYPETFQTKTHEYQWSIIKDHPYIIASYLWNMFDF 542 (692)
T ss_dssp SSSCCBHHHHHHHHHHHHHHHHHCTTSCEEEESCSBCE
T ss_pred cCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEEEeeec
Confidence 11 223443 4566667777653 368899987664
|
| >3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=99.39 E-value=2e-11 Score=136.27 Aligned_cols=212 Identities=15% Similarity=0.136 Sum_probs=134.5
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
.++||+.||++|+|+||+.. .| .. ++++++|.++||+|+.+++.... .++.. +..
T Consensus 306 ~~~dl~~~k~~G~N~vR~~h------~p--~~----------~~~~~~cD~~Gl~V~~e~~~~~~--~~~~~-----~~~ 360 (667)
T 3cmg_A 306 HEEDVALMREMGVNAIRLAH------YP--QA----------TYMYDLMDKHGIVTWAEIPFVGP--GGYAD-----KGF 360 (667)
T ss_dssp HHHHHHHHHHTTCCEEEETT------SC--CC----------HHHHHHHHHHTCEEEEECCCBCC--TTSSS-----CSC
T ss_pred HHHHHHHHHHCCCCEEEecC------CC--CC----------HHHHHHHHHCCCEEEEcccccCc--Ccccc-----ccc
Confidence 47899999999999999942 11 11 45889999999999999974210 01110 000
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCChhhhh
Q 046395 262 EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELL 341 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~~~~~~ 341 (535)
.-.+...+.+.+.++.|++|+++||+|++|.+.||+.... .....+++++++.||+.||.+++..+..+. . .+
T Consensus 361 ~~~~~~~~~~~~~~~~~v~r~rNHPSIi~W~~gNE~~~~~---~~~~~~~~~l~~~vk~~DptRpvt~~~~~~-~--~~- 433 (667)
T 3cmg_A 361 VDQASFRENGKQQLIELIRQHYNHPSICFWGLFNELKEVG---DNPVEYVKELNALAKQEDPTRPTTSASNQD-G--NL- 433 (667)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCCSSS---SCCHHHHHHHHHHHHHHCTTSCEEEEECCC-S--GG-
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCCCEEEEEecccCCCccc---hhHHHHHHHHHHHHHHHCCCCcEEEeCCCC-C--cc-
Confidence 1125778889999999999999999999999999997421 224678899999999999999988765441 1 11
Q ss_pred cccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC------C-C------
Q 046395 342 SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA------E-G------ 408 (535)
Q Consensus 342 ~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~------~-~------ 408 (535)
...-.++++|.|..+.. . ..+.....+. . +. ....+.|++++|||..... . +
T Consensus 434 ----~~~~Dv~~~n~Y~~wy~---~-~~~~~~~~~~----~-~~--~~~p~kPi~~sEyG~~~~~~~~~~~~~~~~~~~~ 498 (667)
T 3cmg_A 434 ----NFITENIAWNRYDGWYG---S-TPKTLATFLD----R-TH--KKHPELRIGISEYGAGASIYHQQDSLKQPSASGW 498 (667)
T ss_dssp ----GGSSSSEEEECCTTTSS---S-CTHHHHHHHH----H-HH--HHCTTCCEEEEEECCCCBTTCCCSSCCCCCTTSS
T ss_pred ----ccccCEEEecccccccc---C-chhhhHHHHH----H-HH--HHCCCCcEEEEEECCCCCcccccccccccccccc
Confidence 11235789999865211 0 1111111111 1 11 1122456999999974210 0 0
Q ss_pred CCHHHHH-HHHHHHHHHHhh--CCcceEEEeeeeC
Q 046395 409 ASKRDYQ-RFAEAQLDVYGR--ATFGWAYWAYKFA 440 (535)
Q Consensus 409 ~~~~~~~-~~~~~ql~~~~~--~~~Gw~~W~~k~~ 440 (535)
...+.++ ++.+.+++.+.+ ..+|.++|++...
T Consensus 499 ~~~e~~q~~~~~~~~~~~~~~~~~~G~fvW~~~D~ 533 (667)
T 3cmg_A 499 WHPENWQTYYHMENWKIIAERPFVWGTFVWNMFDF 533 (667)
T ss_dssp CCBHHHHHHHHHHHHHHHHTCTTCCCEEESCSBCE
T ss_pred cCcHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecc
Confidence 1123333 455666677664 3469999997643
|
| >1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A | Back alignment and structure |
|---|
Probab=99.38 E-value=4.4e-12 Score=136.93 Aligned_cols=259 Identities=14% Similarity=0.201 Sum_probs=141.4
Q ss_pred hhHhHHhhhCccchHHHHHHHH-HcCCCEEEeCCcccccc-----CC--CCCC-CCccchHHHHHHHHHHHHHcCCEEEE
Q 046395 169 AAKLMRDHWKSYITEEDFKFMS-QNGLNAVRIPVGWWIAY-----DP--KPPK-PFVGGSLQALDNAFRWAQKYGMKVIV 239 (535)
Q Consensus 169 a~~~~~~hw~~~ite~D~~~ik-~~G~N~VRipv~~w~~~-----~p--~~~~-~~~~~~l~~ld~~i~~a~~~Gi~VIl 239 (535)
+...+..+| +++++.|+ ++|++.||+++.|...+ ++ .++. .| .+..+|+++++|+++||+++|
T Consensus 27 ~~~~~~~~~-----~e~l~~~~~~~G~~~vR~~~~w~~~~~~~~~~~~~~~g~~~~---~~~~~D~~~~~~~~~Gi~p~v 98 (500)
T 1uhv_A 27 LGLALQKEY-----IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFY---NFTYIDRIFDSFLEIGIRPFV 98 (500)
T ss_dssp GGGGGBHHH-----HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEE---CCHHHHHHHHHHHHHTCEECE
T ss_pred chhhhCHHH-----HHHHHHHHHhcCceEEEEecCcCCCceeeecccccCCCceEE---ehhHHHHHHHHHHHCCCEEEE
Confidence 333445555 79999998 99999999999874211 11 0110 12 478999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHH----HHHHHHHHHHhCCCCcEE--EEEeecCCCCCC----CChHHHH
Q 046395 240 DLHALRVSQNGSPHSGSRDGFQEWS-DSDIQET----VAIIDFLASRYADHPSLV--AIELMNEPKAPD----LKLDSLK 308 (535)
Q Consensus 240 dlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~----~~~~~~la~ry~~~p~V~--~~el~NEP~~~~----~~~~~~~ 308 (535)
.+++.|.......... ......+. +.....+ .++++.+.+||++. .|. .|+++|||.... .+.+.+.
T Consensus 99 ~l~~~P~~~~~~~~~~-~~~~~~~~~p~~~~~w~~~~~~~~~~~~~ryg~~-~V~~W~~~~~NEpn~~~~~~~~~~~~y~ 176 (500)
T 1uhv_A 99 EIGFMPKKLASGTQTV-FYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIE-EVLKWPFEIWNEPNLKEFWKDADEKEYF 176 (500)
T ss_dssp EECCCCTTTBSSCCEE-TTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHH-HHTTCCEEESSCTTSTTTSGGGCHHHHH
T ss_pred EEccChHHHhCCCCce-eecCCCCCCCcCHHHHHHHHHHHHHHHHHhcCcc-ceeeeeEEEeeCCCCcccCCCCCHHHHH
Confidence 9998764321100000 00000111 2333444 44455566677662 154 579999998631 2556788
Q ss_pred HHHHHHHHHHHhcCCCcEEEEcCCCC--CCh-hhhhccc--CCCCcEEEEEeecCcCCCc----ccC---CChhhhHHHH
Q 046395 309 TYYKAGYDTVRKYSSSAYVILSNRLG--GEW-SELLSFA--SNLSRVVIDVHFYNLFWDN----FNK---MSVQQNIDYI 376 (535)
Q Consensus 309 ~~~~~~~~aIR~~~p~~~ii~~~~~g--~~~-~~~~~~~--~~~~n~v~d~H~Y~~~~~~----~~~---~~~~~~i~~i 376 (535)
+++.+++.+||+++|+..|......+ ..| ..++... .+..-.++++|.|...... ... ...+...+.+
T Consensus 177 ~~~~~~~~~ik~~~P~~~vggp~~~~~~~~w~~~~l~~~~~~~~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 256 (500)
T 1uhv_A 177 KLYKVTAKAIKEVNENLKVGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYTPHLIYQEIMPSEYMLNEF 256 (500)
T ss_dssp HHHHHHHHHHHHHCTTSCEEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCCSSCCCCCBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEECcccCCCchHHHHHHHHHHHhCCCCCcEEEEeecCCCcccccccccccccCCHHHHHHHH
Confidence 88999999999999997763321111 112 2333221 2234579999999764310 000 1222222222
Q ss_pred HHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCC-CHHHH-HHHHHHHHHHHhhCCcceEEEeeee
Q 046395 377 YRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGA-SKRDY-QRFAEAQLDVYGRATFGWAYWAYKF 439 (535)
Q Consensus 377 ~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~-~~~~~-~~~~~~ql~~~~~~~~Gw~~W~~k~ 439 (535)
...+ +.+.... ..+.|++|+|||........ ..+.+ ..|+...+......--+..||++..
T Consensus 257 ~~~~-~~l~~~~-~~~~pi~iTE~g~~~~~~~~~~d~~~~a~~l~~~l~~~~~~v~~~~~W~l~D 319 (500)
T 1uhv_A 257 KTVR-EIIKNSH-FPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSD 319 (500)
T ss_dssp HHHH-HHHHTSS-CTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBS
T ss_pred HHHH-HHHHhcC-CCCCcEEEecCcccCCCCCCcCcHHHHHHHHHHHHHHHHhhhhheeeeEEec
Confidence 2211 1121111 12456999999986532111 11112 2343322222212223678999864
|
| >4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.1e-12 Score=134.62 Aligned_cols=262 Identities=15% Similarity=0.167 Sum_probs=142.2
Q ss_pred hhhHhHHhhhCccchHHHHHHH-HHcCCCEEEeCCcccccc---CCCCCC-CCccchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 168 KAAKLMRDHWKSYITEEDFKFM-SQNGLNAVRIPVGWWIAY---DPKPPK-PFVGGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 168 ~a~~~~~~hw~~~ite~D~~~i-k~~G~N~VRipv~~w~~~---~p~~~~-~~~~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
.+...+...| .+.++.+ +++||..||+.=.+...+ ...++. .| .|..+|++|+.|.++||++++.|.
T Consensus 34 ~~~~~l~~d~-----~~~l~~~~~~~g~~~vR~h~l~~d~~~~~~~~~g~~~y---~~~~~D~~~d~~~~~G~~p~~~l~ 105 (500)
T 4ekj_A 34 YPGTLIREDS-----QAQLKTTVDELGFRYIRFHAIFHDVLGTVKVQDGKIVY---DWTKIDQLYDALLAKGIKPFIELG 105 (500)
T ss_dssp CHHHHTSHHH-----HHHHHHHHHHHCCCEEECSCTTCTTTTCEEEETTEEEE---CCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CchhhcChHH-----HHHHHHHHHhcCceEEEECCccccccceeecCCCCeec---chHHHHHHHHHHHHCCCEEEEEEe
Confidence 3444444555 5666666 579999999842111000 111111 13 589999999999999999999998
Q ss_pred CCCCCCCCCCCCCC-CCCC-CCCC-hHHHHHHHHHHHHHHHHhCCC-CcEEEEEeecCCCCC----CCChHHHHHHHHHH
Q 046395 243 ALRVSQNGSPHSGS-RDGF-QEWS-DSDIQETVAIIDFLASRYADH-PSLVAIELMNEPKAP----DLKLDSLKTYYKAG 314 (535)
Q Consensus 243 ~~pg~~ng~~~sg~-~~~~-~~W~-~~~~~~~~~~~~~la~ry~~~-p~V~~~el~NEP~~~----~~~~~~~~~~~~~~ 314 (535)
..|........... ..+. ..-. ....+.+.++++++++||+.+ -.+..||++|||... ..+.+.+.++++.+
T Consensus 106 ~~P~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~RYg~~~v~~w~~EvwNEp~~~~~~~~~~~~~y~~l~~~~ 185 (500)
T 4ekj_A 106 FTPEAMKTSDQTIFYWKGNTSHPKLGPWRDLIDAFVHHLRARYGVEEVRTWFFEVWNEPNLDGFWEKADQAAYFELYDVT 185 (500)
T ss_dssp CBCGGGCSSCCEETTTTEECSCCCHHHHHHHHHHHHHHHHHHHCHHHHHTSEEEESSCTTSTTTSGGGCHHHHHHHHHHH
T ss_pred CCchhhcCCCCccccccCCCCcccHHHHHHHHHHHHHHHHHhhCccccceeEEEEEECCCCccCCCCCCHHHHHHHHHHH
Confidence 76642211100000 0000 0000 233445567788888999753 245579999999864 23567899999999
Q ss_pred HHHHHhcCCCcEEEEcCCCC-CChhhhhccc--CCCCcEEEEEeecCcCCCccc---------CCChhhhHHHHHHhhhH
Q 046395 315 YDTVRKYSSSAYVILSNRLG-GEWSELLSFA--SNLSRVVIDVHFYNLFWDNFN---------KMSVQQNIDYIYRQRSS 382 (535)
Q Consensus 315 ~~aIR~~~p~~~ii~~~~~g-~~~~~~~~~~--~~~~n~v~d~H~Y~~~~~~~~---------~~~~~~~i~~i~~~~~~ 382 (535)
+++||+++|+..|...+.-+ .....++... .+..-.++++|.|........ ....+.....+...+ +
T Consensus 186 ~~aik~~~P~~~Vgg~~~~~~~~~~~fl~~~~~~~~~~D~is~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r-~ 264 (500)
T 4ekj_A 186 ARAIKAIDPSLRVGGPATAGAAWVPEFLAHVKKSGSAVDFVTTHTYGVDGGFLDEKGVQDTKLSPSPDAVVGDVRRVR-E 264 (500)
T ss_dssp HHHHHHHCTTSEEEEEEEGGGCSHHHHHHHHHHTTCCCSEEEEEEESEEEEEECTTSCEEEEECCSTTTTHHHHHHHH-H
T ss_pred HHHHHhhCCccccccCccCCccccHHHHHHHHhcCCccceEEeeccCCCCCCcccccccccccccCHHHHHHHHHHHH-H
Confidence 99999999998875432111 2223333211 234557899999964211000 111222233332211 1
Q ss_pred HHHHHhhcCCCcEEEeccCCCcCCCCC--CHHHHHHHHHHHHHHHhhCCcceEEEeeee
Q 046395 383 DLRNVTTSDGPLSFVGEWSCEWEAEGA--SKRDYQRFAEAQLDVYGRATFGWAYWAYKF 439 (535)
Q Consensus 383 ~l~~~~~~~~p~v~vGEfg~~~~~~~~--~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~ 439 (535)
.++... ....|++++|||........ .......|+...+........+-.||+|..
T Consensus 265 ~l~~~~-~~~~pi~itE~g~~~~~~~~~~~~~~~Aa~i~~~~~~~~~~~~~~~~w~~~d 322 (500)
T 4ekj_A 265 QIEASA-FPGLPLYFTEWSTSYTPRDSVHDSYVSAAYIVEKLRRVKGLVQAMSYWTYSD 322 (500)
T ss_dssp HHHTTT-STTCCEEEEEEESCSCTTCTTTTSTHHHHHHHHHHHHHTTTCSEEEESCSBS
T ss_pred HHHHhC-CCCCcEEEEeccCCCCCCCccccHHHHHHHHHHHHHHhhhhCceeeEEEEEe
Confidence 122111 12356999999976432211 111222343322222222334667888764
|
| >3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=99.26 E-value=2.5e-11 Score=132.74 Aligned_cols=142 Identities=18% Similarity=0.168 Sum_probs=105.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC------CCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL------RVSQNGSPHSGS 256 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~------pg~~ng~~~sg~ 256 (535)
++|++.||++|+|+||+.|. |...+|.++. |+.+.++.++++++.|+++||+||+.+... .|+.-.|.....
T Consensus 40 ~~dl~~mK~~G~N~Vrt~v~-W~~hEP~~G~-ydf~gl~~l~~fl~la~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~ 117 (612)
T 3d3a_A 40 EHRIKMCKALGMNTICLYVF-WNFHEPEEGR-YDFAGQKDIAAFCRLAQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKK 117 (612)
T ss_dssp HHHHHHHHHHTCCEEEEECC-HHHHCSSTTC-CCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGST
T ss_pred HHHHHHHHHcCCCEEEEcCh-HHhcCCCCCc-cChhHHHHHHHHHHHHHHCCCEEEEecCcccccccccCCCchhhccCC
Confidence 89999999999999999998 6888999886 988889999999999999999999987411 011111110000
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHhCC-----CCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcC-CCcEEEEc
Q 046395 257 RDGFQEWSDSDIQETVAIIDFLASRYAD-----HPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYS-SSAYVILS 330 (535)
Q Consensus 257 ~~~~~~W~~~~~~~~~~~~~~la~ry~~-----~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~-p~~~ii~~ 330 (535)
......-.+.+.+.+.++++.|++||++ +|.|++|+|-||+..... -+.+.+.+.+.+|+.+ +....+..
T Consensus 118 ~~~~r~~dp~y~~~~~~~~~~l~~r~~~~~~~n~p~II~wqIeNEyg~yg~----~~~y~~~l~~~l~~~g~~~vp~~~~ 193 (612)
T 3d3a_A 118 DIKLREQDPYYMERVKLFLNEVGKQLADLQISKGGNIIMVQVENEYGAFGI----DKPYISEIRDMVKQAGFTGVPLFQC 193 (612)
T ss_dssp TCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGTCC----CHHHHHHHHHHHHHHTCCSSCEEEE
T ss_pred CceecCCCHHHHHHHHHHHHHHHHHHhhhhhccCCCEEEEeecccccccCc----hHHHHHHHHHHHHHcCCCchhheec
Confidence 0000011167889999999999999995 999999999999963211 2467778888889887 46665544
|
| >3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.4e-10 Score=117.06 Aligned_cols=229 Identities=15% Similarity=0.193 Sum_probs=135.0
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCC-CCccc---hHHHHHHHHHHHHHcCCEEEEecCCC--CCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPK-PFVGG---SLQALDNAFRWAQKYGMKVIVDLHAL--RVSQNGSPHSG 255 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~-~~~~~---~l~~ld~~i~~a~~~Gi~VIldlH~~--pg~~ng~~~sg 255 (535)
.++.|+.|++.|+|+|||.+.|+.. ++..+. .+..+ ..+.+.++++.|+++||+|+|+.|-. +|...+.-...
T Consensus 55 ~~~~l~~lk~~g~N~VrL~v~~~~~-~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~~GL~V~l~p~i~~~~g~w~g~i~~~ 133 (343)
T 3civ_A 55 ARASMRALAEQPFNWVTLAFAGLME-HPGDPAIAYGPPVTVSDDEIASMAELAHALGLKVCLKPTVNCRDGTWRGEIRFE 133 (343)
T ss_dssp HHHHHHHHHHSSCSEEEEEEEEEES-STTCCCCBCSTTTBCCHHHHHHHHHHHHHTTCEEEEEEEEEETTCCCGGGCCCS
T ss_pred HHHHHHHHHHcCCCEEEEEeeecCC-CCCCCcccccCCCCCCHHHHHHHHHHHHHCCCEEEEEEEeeccCCccccccccc
Confidence 3689999999999999998876432 222211 12222 68999999999999999999999943 33221110111
Q ss_pred CCC--CCCCCCh--HHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 256 SRD--GFQEWSD--SDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 256 ~~~--~~~~W~~--~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
..+ ....|.. ....+++..+..++++. .|.+|.|.||+..... -..++.++++.+|+++|. +|....
T Consensus 134 ~~~~~~~~~w~~~f~~y~~~i~~~a~~a~~~----~V~~~~IGNE~~~~~~----~~~~~~~Li~~vR~~~~g-~VTya~ 204 (343)
T 3civ_A 134 KEHGPDLESWEAWFGSYSDMMAHYAHVAKRT----GCEMFCVGCEMTTAEP----HEAMWRETIARVRTEYDG-LVTYNC 204 (343)
T ss_dssp BSCCTTSSBHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEESCTTTTT----CHHHHHHHHHHHHHHCCS-EEEEEE
T ss_pred CcCCcchHHHHHHHHHHHHHHHHHHHHccCC----CceEEEECCCCCCCCc----hHHHHHHHHHHHHhhCCC-CEEEEe
Confidence 000 1112210 11122233334445544 4788999999986432 245677789999999997 554432
Q ss_pred CCCC-ChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC---
Q 046395 332 RLGG-EWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE--- 407 (535)
Q Consensus 332 ~~g~-~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~--- 407 (535)
.+.. +-..+. ..-++++++.|.++.. .+. +. ..+..+.+..++|++++|||+..-..
T Consensus 205 ~~~~~~~~~lw-----~~~DvIgin~Y~~~~~------w~~----~~----~~l~~~~~~~~KPIiitE~G~~s~~g~~~ 265 (343)
T 3civ_A 205 NHGREEHVRFW-----DAVDLISSSAYYPIDR------WRD----RV----PVLREVAEAHEKPLFFMEVGCPSRSGSGA 265 (343)
T ss_dssp ETTCTTTCSCG-----GGSSEEEEECCCCGGG------HHH----HH----HHHHHHHHHHTCCEEEEEECCCSBTTGGG
T ss_pred cCccccccccc-----ccCCEEEEeccCCchh------HHH----HH----HHHHHHHHHhCCCEEEEeeCCCCCCCCCC
Confidence 2211 101111 2457899999977521 111 11 22333433335669999999864211
Q ss_pred ---------CCCHHHHHHHHHHHHHHHhhCC--cceEEEeeee
Q 046395 408 ---------GASKRDYQRFAEAQLDVYGRAT--FGWAYWAYKF 439 (535)
Q Consensus 408 ---------~~~~~~~~~~~~~ql~~~~~~~--~Gw~~W~~k~ 439 (535)
..+.+.-.++++++++++.+.. .|-+.|.|..
T Consensus 266 ~p~~~~~~~~~se~~Qa~~l~~~~~~~~~~~~~~G~~vW~w~~ 308 (343)
T 3civ_A 266 CPWDYRHPGAVCLDEQARFYEAMFAAMPDEPWFKGYMLWEWPW 308 (343)
T ss_dssp STTCTTCCCCBCHHHHHHHHHHHHHHSCCCTTEEEEEEEEECS
T ss_pred CCCcccCCCCCCHHHHHHHHHHHHHHHhcCCCccEEEEEEECC
Confidence 1223344578899899887543 4778899866
|
| >1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.23 E-value=2.2e-10 Score=117.80 Aligned_cols=227 Identities=13% Similarity=0.171 Sum_probs=142.1
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---ecCCC-CCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV---DLHAL-RVSQNGSPHSGS 256 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIl---dlH~~-pg~~ng~~~sg~ 256 (535)
+++.+.|...+||.|++ .+.| ..++|.++. | .+..+|+++++|+++||+|+. -+|.. |. |...
T Consensus 52 ~~~~~~~~~~~fn~vt~en~~kW-~~~ep~~g~-~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~----W~~~-- 120 (347)
T 1xyz_A 52 DPTYNSILQREFSMVVCENEMKF-DALQPRQNV-F---DFSKGDQLLAFAERNGMQMRGHTLIWHNQNPS----WLTN-- 120 (347)
T ss_dssp CHHHHHHHHHHCSEEEESSTTSH-HHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCH----HHHT--
T ss_pred hHHHHHHHHhcCCEEEECCcccH-HHhcCCCCc-C---ChHHHHHHHHHHHHCCCEEEEEeeeccccCcH----HHhc--
Confidence 37788888899999999 6654 778888875 6 578999999999999999973 34532 11 1111
Q ss_pred CCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC---hHHH-----HHHHHHHHHHHHhcCCCcEE
Q 046395 257 RDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK---LDSL-----KTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 257 ~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~---~~~~-----~~~~~~~~~aIR~~~p~~~i 327 (535)
..+. +..++.+.++++.+++||++ .|.+|++.|||...... ...| .+|++.+++++|+.+|+..+
T Consensus 121 ----~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~g~~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L 194 (347)
T 1xyz_A 121 ----GNWNRDSLLAVMKNHITTVMTHYKG--KIVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALL 194 (347)
T ss_dssp ----SCCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEE
T ss_pred ----CCCCHHHHHHHHHHHHHHHHHHhCC--eeEEEEeecccccCCCcccccChHHHhcCHHHHHHHHHHHHhhCCCCEE
Confidence 1233 57888999999999999999 48999999999864211 1122 46899999999999999987
Q ss_pred EEcCCCC---CCh--hh-------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcE
Q 046395 328 ILSNRLG---GEW--SE-------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLS 395 (535)
Q Consensus 328 i~~~~~g---~~~--~~-------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v 395 (535)
++.+ |+ ... .. +......-+.+-+..|....+ ... .++.++ ..|..+... +.|+
T Consensus 195 ~~Nd-yn~~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~-------~~~-~~~~~~----~~l~~~a~~-G~pi 260 (347)
T 1xyz_A 195 FYND-YNIEDLGPKSNAVFNMIKSMKERGVPIDGVGFQCHFINGM-------SPE-YLASID----QNIKRYAEI-GVIV 260 (347)
T ss_dssp EEEE-SSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC-------CHH-HHHHHH----HHHHHHHHT-TCEE
T ss_pred Eecc-CccccccchHHHHHHHHHHHHHCCCCcceEEEeeecCCCC-------Cch-hHHHHH----HHHHHHHhc-CCce
Confidence 7743 21 111 11 111112234444555765321 111 012222 234444444 5579
Q ss_pred EEeccCCCcCCCCCCH---HHHHHHHHHHHHHHhhC--CcceEEEeeeeC
Q 046395 396 FVGEWSCEWEAEGASK---RDYQRFAEAQLDVYGRA--TFGWAYWAYKFA 440 (535)
Q Consensus 396 ~vGEfg~~~~~~~~~~---~~~~~~~~~ql~~~~~~--~~Gw~~W~~k~~ 440 (535)
+|+|++.......... +...++++..+.++.+. ..|-++|.+...
T Consensus 261 ~iTEldi~~~~~~~~~~~~~~Qa~~y~~~~~~~~~~~~v~git~Wg~~D~ 310 (347)
T 1xyz_A 261 SFTEIDIRIPQSENPATAFQVQANNYKELMKICLANPNCNTFVMWGFTDK 310 (347)
T ss_dssp EEEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBTT
T ss_pred EEEeccccCCCCCCchhHHHHHHHHHHHHHHHHHhcCCeeEEEEecCccC
Confidence 9999987542211111 12224455555665443 368888987663
|
| >1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.22 E-value=3.1e-10 Score=114.55 Aligned_cols=218 Identities=16% Similarity=0.154 Sum_probs=139.7
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCCC-CCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHAL-RVSQNGSPHSGS 256 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~~-pg~~ng~~~sg~ 256 (535)
+++++.|...+||.|++ .+.| ..++|.++. | .+..+|++|++|+++||.|+.. +|.. |. |.
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW-~~~ep~~g~-~---~~~~~D~~v~~a~~~gi~v~gh~lvW~~~~P~----W~---- 92 (302)
T 1nq6_A 26 EAAYASTLDAQFGSVTPENEMKW-DAVESSRNS-F---SFSAADRIVSHAQSKGMKVRGHTLVWHSQLPG----WV---- 92 (302)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSH-HHHCSBTTB-C---CCHHHHHHHHHHHHHTCEEEEEEEEESTTCCT----TT----
T ss_pred CHHHHHHHHhcCCeEEEcCceee-ccccCCCCc-C---CcHHHHHHHHHHHHCCCEEEEEecccCCCCCh----hh----
Confidence 47788888899999999 5655 778998875 6 5788999999999999999632 3532 21 11
Q ss_pred CCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----ChHHH-----HHHHHHHHHHHHhcCCCcE
Q 046395 257 RDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----KLDSL-----KTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 257 ~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~~~~~-----~~~~~~~~~aIR~~~p~~~ 326 (535)
..|. ++..+.+.++++.+++||++ .|.+|++.|||..... ....| .+|++.+++++|+.+|+..
T Consensus 93 ----~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~~~g~~r~s~~~~~~g~~~~~~af~~Ar~~dP~a~ 166 (302)
T 1nq6_A 93 ----SPLAATDLRSAMNNHITQVMTHYKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAK 166 (302)
T ss_dssp ----TTSCHHHHHHHHHHHHHHHHHHTTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSE
T ss_pred ----hcCCHHHHHHHHHHHHHHHHHHcCC--ceEEEEeecCccccCCCCccccCHHHHhcCHHHHHHHHHHHHHhCCCCE
Confidence 1233 57888999999999999998 7999999999986421 00112 3588999999999999988
Q ss_pred EEEcCCCC--C-C--hhh---hhc-c---cCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCc
Q 046395 327 VILSNRLG--G-E--WSE---LLS-F---ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPL 394 (535)
Q Consensus 327 ii~~~~~g--~-~--~~~---~~~-~---~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~ 394 (535)
+++.+ |. . . ... +.. + ....+.+-+..|.+.... ..+.. . ..+..+.. .+.|
T Consensus 167 L~~Nd-y~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~q~H~~~~~~------~~~~~----~----~~l~~~a~-~g~p 230 (302)
T 1nq6_A 167 LCYND-YNTDGQNAKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSP------VPSDF----Q----ANLQRFAD-LGVD 230 (302)
T ss_dssp EEEEE-SSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTTH----H----HHHHHHHT-TTCE
T ss_pred EEecc-cccccCchHHHHHHHHHHHHHHCCCCcceEEEEEeecCCCC------CHHHH----H----HHHHHHHh-cCCc
Confidence 77753 21 1 1 011 111 1 112355555558873210 11111 1 12333333 3557
Q ss_pred EEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhC--CcceEEEeeeeC
Q 046395 395 SFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRA--TFGWAYWAYKFA 440 (535)
Q Consensus 395 v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~--~~Gw~~W~~k~~ 440 (535)
++|+|++... +.+...++++..+..+.+. ..|.++|.+...
T Consensus 231 i~iTE~di~~-----~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D~ 273 (302)
T 1nq6_A 231 VQITELDIEG-----SGSAQAANYTKVVNACLAVTRCTGITVWGVTDK 273 (302)
T ss_dssp EEEEEEEECC-----CHHHHHHHHHHHHHHHHTSTTEEEEEESCSCGG
T ss_pred EEEeeCCCCC-----chHHHHHHHHHHHHHHHhCCCceEEEEEcCCCC
Confidence 9999998652 2222334555555555442 368889988764
|
| >3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A | Back alignment and structure |
|---|
Probab=99.20 E-value=3.7e-10 Score=130.58 Aligned_cols=202 Identities=17% Similarity=0.150 Sum_probs=124.5
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC-CCCC--------CCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL-RVSQ--------NGSP 252 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~~--------ng~~ 252 (535)
.++||+.||++|+|+||+.. - |..+. ++++|.++||+||-+.... +|.. ...+
T Consensus 377 ~~~Di~lmK~~g~NaVRtsH------y--p~~~~----------fydlCDe~Gi~V~dE~~~e~hG~~~~~~~p~~~~~~ 438 (1032)
T 3oba_A 377 VVRDLILMKKFNINAVRNSH------Y--PNHPK----------VYDLFDKLGFWVIDEADLETHGVQEPFNRHTNLEAE 438 (1032)
T ss_dssp HHHHHHHHHHTTCCEEECTT------S--CCCTT----------HHHHHHHHTCEEEEECSCBCGGGGHHHHHHTTCCCC
T ss_pred HHHHHHHHHHcCCcEEEecC------C--CChHH----------HHHHHHHCCCEEEEccccccCCcccccccccccccc
Confidence 47899999999999999842 1 22222 6899999999999987311 1100 0000
Q ss_pred CCCC-------CCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCc
Q 046395 253 HSGS-------RDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 253 ~sg~-------~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
..+. ......-.++..+.+.+.++.|++|+++||+|++|.+.||+... ...+++++.+|+.||.+
T Consensus 439 ~~~~~~~~~~~~~~~~~~~p~w~~~~~~~~~~mV~RdrNHPSIi~WslgNE~~~g--------~~~~~~~~~~k~~DptR 510 (1032)
T 3oba_A 439 YPDTKNKLYDVNAHYLSDNPEYEVAYLDRASQLVLRDVNHPSIIIWSLGNEACYG--------RNHKAMYKLIKQLDPTR 510 (1032)
T ss_dssp CTTTTHHHHTTTGGGTTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCBSCCCC--------HHHHHHHHHHHHHCTTS
T ss_pred ccccccccccccccccCCCHHHHHHHHHHHHHHHHHhcCCCeEEEEECccCCccc--------hhHHHHHHHHHHhCCCC
Confidence 0000 00011112577888899999999999999999999999998742 24678899999999999
Q ss_pred EEEEcCCCCCChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcC
Q 046395 326 YVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWE 405 (535)
Q Consensus 326 ~ii~~~~~g~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~ 405 (535)
+|...+.+. .....+++. +|.. .+....++.... ........|+++.||+.+.+
T Consensus 511 pv~~e~~~~-----------~~~~Di~s~-mY~~---------~~~i~~~~~~~~-----~~~~~~~kP~i~~Ey~Hamg 564 (1032)
T 3oba_A 511 LVHYEGDLN-----------ALSADIFSF-MYPT---------FEIMERWRKNHT-----DENGKFEKPLILCEYGHAMG 564 (1032)
T ss_dssp EEECTTCTT-----------CTTCSSEEE-ESCC---------HHHHHHHHHHHB-----CTTSCBSSCEEEEEESCCCS
T ss_pred cEEeccCcC-----------cccceeeec-cCCC---------HHHHHHHHhhCc-----ccccccCCCEEEEecccccc
Confidence 987654320 112234554 5632 111111111000 00001134699999998887
Q ss_pred CCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 406 AEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 406 ~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
...+..++|.+.++. +. .-.|-+.|.|-..
T Consensus 565 n~~g~l~~yw~~~~~----~p-~~~GgfiWdw~Dq 594 (1032)
T 3oba_A 565 NGPGSLKEYQELFYK----EK-FYQGGFIWEWANH 594 (1032)
T ss_dssp SCCCCHHHHHHHHHH----CT-TEEEEEESCSBCC
T ss_pred CCCCCHHHHHHHHHh----CC-CeeEEEEEecccc
Confidence 666666665544322 11 3368899998664
|
| >1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 | Back alignment and structure |
|---|
Probab=99.20 E-value=2.9e-10 Score=131.56 Aligned_cols=120 Identities=22% Similarity=0.171 Sum_probs=88.4
Q ss_pred cchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC-CCCCC-CCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL-RVSQN-GSPHSGSR 257 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~~n-g~~~sg~~ 257 (535)
...++||+.||++|+|+||+.. + |. -+.++++|.++||+||.++... .|... .|.
T Consensus 349 e~~~~dl~lmK~~G~N~VR~~h-y-------p~----------~~~fydlcDe~Gi~V~~E~~~~~~g~~~~~w~----- 405 (1024)
T 1yq2_A 349 AGAREDLALMKRFNVNAIRTSH-Y-------PP----------HPRLLDLADEMGFWVILECDLETHGFEAGGWV----- 405 (1024)
T ss_dssp HHHHHHHHHHHHTTCCEEEETT-S-------CC----------CHHHHHHHHHHTCEEEEECSCBCGGGTTTTTT-----
T ss_pred HHHHHHHHHHHHcCCCEEEecC-C-------CC----------CHHHHHHHHHCCCEEEEcCCcccCCccccccc-----
Confidence 3447999999999999999941 1 11 1457899999999999987311 01000 000
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 258 DGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 258 ~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
....-.++..+.+.+.++.|++|+++||+|++|.+.||+... .+++++++.+|+.||.++|...+
T Consensus 406 -~~~~~~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpv~~~~ 470 (1024)
T 1yq2_A 406 -ENPSDVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGTG--------SNLAAMAAWAHARDSSRPVHYEG 470 (1024)
T ss_dssp -TCGGGCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECTT
T ss_pred -ccCCCCHHHHHHHHHHHHHHHHHcCCCCeEEEEECCcCcchH--------HHHHHHHHHHHHhCCCceEEeCC
Confidence 011111567788899999999999999999999999999742 35778899999999999987654
|
| >1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.4e-11 Score=132.71 Aligned_cols=134 Identities=16% Similarity=0.295 Sum_probs=98.7
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCC-CCCCCccchHHHHHHHHHHHHHcCCEEE--EecCCCCCCCCCCCC------
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPK-PPKPFVGGSLQALDNAFRWAQKYGMKVI--VDLHALRVSQNGSPH------ 253 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~-~~~~~~~~~l~~ld~~i~~a~~~Gi~VI--ldlH~~pg~~ng~~~------ 253 (535)
++|++.||++|+|+||++| +|..++|. ++. | .++.+|++|+.|+++||+|| |++|.++|....+.+
T Consensus 32 ~~dl~~mk~~Gln~Vr~~V-~W~~iEP~g~G~-y---df~~~d~~id~a~~~GL~viv~L~~h~c~g~~g~~~~~~lP~W 106 (516)
T 1vem_A 32 ENDLRWAKQNGFYAITVDF-WWGDMEKNGDQQ-F---DFSYAQRFAQSVKNAGMKMIPIISTHQCGGNVGDDCNVPIPSW 106 (516)
T ss_dssp HHHHHHHHHTTEEEEEEEE-EHHHHTCSSTTC-C---CCHHHHHHHHHHHHTTCEEEEEEECSCBSSSTTCCCCBCCCGG
T ss_pred HHHHHHHHHcCCCEEEEec-chhhccCCCCCc-c---chHHHHHHHHHHHHCCCEEEEEecccccCCCcCCCCCCCCCHH
Confidence 8999999999999999999 77999998 665 8 47889999999999999999 999866542211111
Q ss_pred ---------------CCCCCC--CCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEE----------------EEeecCCCC
Q 046395 254 ---------------SGSRDG--FQEWS-DSDIQETVAIIDFLASRYADHPSLVA----------------IELMNEPKA 299 (535)
Q Consensus 254 ---------------sg~~~~--~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~----------------~el~NEP~~ 299 (535)
.|.+.. ...|. ....+.+.++++.|++||++++.|++ |++-||...
T Consensus 107 L~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r~~~~~~vI~eI~vglG~~GelryPs~qv~NE~g~ 186 (516)
T 1vem_A 107 VWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAAMKPYKDVIAKIYLSGGPAGELRYPSYTTSDGTGY 186 (516)
T ss_dssp GGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHHTGGGGGGBCCEEECCSGGGBSSCCCCCTTTTCCT
T ss_pred HHhcCCccceeeECCCCCCCcccccccccCccHHHHHHHHHHHHHHHccCCCEEEEeeccccccccccccccccccCcCC
Confidence 111100 11143 45678889999999999999999999 999999765
Q ss_pred CCC------C---hHHHHHHHHHHHHHHHhc
Q 046395 300 PDL------K---LDSLKTYYKAGYDTVRKY 321 (535)
Q Consensus 300 ~~~------~---~~~~~~~~~~~~~aIR~~ 321 (535)
++. + ...++.++++.+..|.+.
T Consensus 187 ~g~~~~~~y~~~~~~~fr~~l~~~ygtl~~l 217 (516)
T 1vem_A 187 PSRGKFQAYTEFAKSKFRLWVLNKYGSLNEV 217 (516)
T ss_dssp TSCCCCCCCSHHHHHHHHHHHHHHHSSHHHH
T ss_pred CCccchhccCHHHHHHHHHHHHHhcCCHHHH
Confidence 421 1 246677777665444444
|
| >2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus} | Back alignment and structure |
|---|
Probab=99.17 E-value=6e-11 Score=107.57 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=72.2
Q ss_pred CceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCC
Q 046395 17 GTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPE 96 (535)
Q Consensus 17 ~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e 96 (535)
++.|+|||. +|||||++..| .|+|+++.+ +.||+|+|.+- ++.+.||..||+||++.. ++.|+|++++++.+|
T Consensus 71 ~~~v~LRs~-~GkYLs~~~~G--~v~a~a~~~--g~~E~F~l~~~-~G~~aLra~nG~yl~~~~-~g~l~a~a~~~~~~E 143 (155)
T 2yug_A 71 DSRIALKSG-YGKYLGINSDG--LVVGRSDAI--GPREQWEPVFQ-DGKMALLASNSCFIRCNE-AGDIEAKNKTAGEEE 143 (155)
T ss_dssp SSCEEEEET-TSCBEEECSSS--BEEECCSSC--CTTTBEEEECS-TTCCEEEETTSCBEEECS-SSCEEECCSCCCTTT
T ss_pred CCEEEEEeC-CCCEEEecCCC--cEEeccCCC--CCCCEEEEEEE-CCEEEEEeCCCCEEEEcC-CCcEEEecCCCCCCc
Confidence 369999985 69999999876 899999999 99999999887 889999999999999987 677999999999999
Q ss_pred ceEEEec
Q 046395 97 PFQITRK 103 (535)
Q Consensus 97 ~f~~~~~ 103 (535)
+|.+.-+
T Consensus 144 ~f~v~l~ 150 (155)
T 2yug_A 144 MIKIRSC 150 (155)
T ss_dssp CCEEEEC
T ss_pred EEEEEEe
Confidence 9976543
|
| >3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* | Back alignment and structure |
|---|
Probab=99.16 E-value=3.4e-10 Score=114.94 Aligned_cols=222 Identities=14% Similarity=0.167 Sum_probs=140.0
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCCC-CCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHAL-RVSQNGSPHSGS 256 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~~-pg~~ng~~~sg~ 256 (535)
+.+++.|.+.+||.||+ .+.| ..++|.++. | .+..+|+++++|+++||.|+.. +|.. |. |.
T Consensus 26 ~~~~~~~~~~~fn~~t~en~~kW-~~~ep~~g~-~---~~~~~D~~~~~a~~~gi~v~ghtl~W~~~~P~----W~---- 92 (315)
T 3cui_A 26 EAQYKAIADSEFNLVVAENAMKW-DATEPSQNS-F---SFGAGDRVASYAADTGKELYGHTLVWHSQLPD----WA---- 92 (315)
T ss_dssp SHHHHHHHHHHCSEEEESSTTSH-HHHCSBTTB-C---CCHHHHHHHHHHHHHTCEEEEEEEEESSSCCH----HH----
T ss_pred CHHHHHHHHhcCCEEEECCcccH-HHhCCCCCc-C---ChHHHHHHHHHHHHCCCEEEEEeeecCCCCCH----HH----
Confidence 47888888899999999 5654 778888875 6 5789999999999999998653 2421 11 10
Q ss_pred CCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC-CC--hHHH-----HHHHHHHHHHHHhcCCCcEE
Q 046395 257 RDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD-LK--LDSL-----KTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 257 ~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~-~~--~~~~-----~~~~~~~~~aIR~~~p~~~i 327 (535)
..+. ++..+...++++.+++||++ .|.+|++.|||.... .. ...| .+|++.+++++|+.+|+..+
T Consensus 93 ----~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~~g~~r~~~~~~~~g~~~i~~af~~Ar~~dP~a~l 166 (315)
T 3cui_A 93 ----KNLNGSAFESAMVNHVTKVADHFEG--KVASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKL 166 (315)
T ss_dssp ----HTCCHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEE
T ss_pred ----hcCCHHHHHHHHHHHHHHHHHHcCC--ceEEEEeecccccCCCCccccchHHHhccHHHHHHHHHHHHhhCCCCEE
Confidence 0123 56788999999999999999 599999999998642 11 0112 46889999999999999988
Q ss_pred EEcCCCC--C-Ch--hh-------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcE
Q 046395 328 ILSNRLG--G-EW--SE-------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLS 395 (535)
Q Consensus 328 i~~~~~g--~-~~--~~-------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v 395 (535)
++.+ ++ . .. .. +.......+.+-+..|..... ..+. ++ ..+..+... +.|+
T Consensus 167 ~~nd-y~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~-------~~~~----~~----~~l~~~a~~-g~pv 229 (315)
T 3cui_A 167 CIND-YNVEGINAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQ-------VPGD----FR----QNLQRFADL-GVDV 229 (315)
T ss_dssp EEEE-SSCSSSSHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTC-------CCTT----HH----HHHHHHHTT-TCEE
T ss_pred EECC-ccccCcchHHHHHHHHHHHHHHCCCcccEEEeeeecCCCC-------CHHH----HH----HHHHHHHhc-CCce
Confidence 7753 21 1 10 11 111112234454555654321 1111 11 223344433 5679
Q ss_pred EEeccCCCcCCCCC--CHHHHHHHHHHHHHHHhhC--CcceEEEeeeeC
Q 046395 396 FVGEWSCEWEAEGA--SKRDYQRFAEAQLDVYGRA--TFGWAYWAYKFA 440 (535)
Q Consensus 396 ~vGEfg~~~~~~~~--~~~~~~~~~~~ql~~~~~~--~~Gw~~W~~k~~ 440 (535)
+|+|++........ +.+...++++..+..+.+. ..|-++|.+...
T Consensus 230 ~iTE~di~~~~~~~~~~~~~qa~~~~~~~~~~~~~~~v~git~Wg~~D~ 278 (315)
T 3cui_A 230 RITELDIRMRTPSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITDK 278 (315)
T ss_dssp EEEEEEEEEESSCCHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBTT
T ss_pred EEEecccccCCCCChHHHHHHHHHHHHHHHHHHhCCCceEEEEEeCCCC
Confidence 99999976321111 1112234555556665443 368889987653
|
| >1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ... | Back alignment and structure |
|---|
Probab=99.15 E-value=3.3e-10 Score=131.07 Aligned_cols=118 Identities=20% Similarity=0.216 Sum_probs=88.1
Q ss_pred cchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC-CCCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL-RVSQNGSPHSGSRD 258 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~~ng~~~sg~~~ 258 (535)
...++||+.||++|+|+||+.. + |.. +.++++|.++||+||.++... .|. +. .
T Consensus 370 e~~~~dl~lmK~~g~N~vR~~h-y-------p~~----------~~~~dlcDe~Gi~V~~E~~~~~~g~---~~-----~ 423 (1023)
T 1jz7_A 370 QTMVQDILLMKQNNFNAVRCSH-Y-------PNH----------PLWYTLCDRYGLYVVDEANIETHGM---VP-----M 423 (1023)
T ss_dssp HHHHHHHHHHHHTTCCEEECTT-S-------CCC----------HHHHHHHHHHTCEEEEECSCBCTTS---SS-----T
T ss_pred HHHHHHHHHHHHcCCCEEEecC-C-------CCC----------HHHHHHHHHCCCEEEECCCcccCCc---cc-----c
Confidence 3447899999999999999942 1 111 357899999999999987321 110 00 0
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 259 GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 259 ~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
....-.++..+.+.+.++.|++|+++||+|++|.+.||+... ...+++++.||+.||.++|..+.
T Consensus 424 ~~~~~~p~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~~--------~~~~~l~~~ik~~DptRpv~~~~ 488 (1023)
T 1jz7_A 424 NRLTDDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 488 (1023)
T ss_dssp TTTTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEEECccCCcch--------HHHHHHHHHHHHhCCCCeEEecC
Confidence 111112567888889999999999999999999999999742 24678899999999999987654
|
| >3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A | Back alignment and structure |
|---|
Probab=99.11 E-value=6.3e-10 Score=128.51 Aligned_cols=119 Identities=18% Similarity=0.261 Sum_probs=87.9
Q ss_pred cchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC-CCCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL-RVSQNGSPHSGSRD 258 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~~ng~~~sg~~~ 258 (535)
...++||+.||++|+|+||+.. + |.. ++++++|.++||+|+.++... .|.. + +.
T Consensus 372 e~~~~dl~lmK~~G~N~IR~~h-y-------p~~----------~~~ydlcDe~Gi~V~~E~~~~~~g~~--~---~~-- 426 (1010)
T 3bga_A 372 ELMEQDIRLMKQHNINMVRNSH-Y-------PTH----------PYWYQLCDRYGLYMIDEANIESHGMG--Y---GP-- 426 (1010)
T ss_dssp HHHHHHHHHHHHTTCCEEEETT-S-------CCC----------HHHHHHHHHHTCEEEEECSCBCGGGC--S---ST--
T ss_pred HHHHHHHHHHHHCCCCEEEeCC-C-------CCC----------HHHHHHHHHCCCEEEEccCccccCcc--c---cC--
Confidence 3447899999999999999941 1 111 357899999999999987321 1100 0 00
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 259 GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 259 ~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
+...-.++..+.+.+.++.|++|+++||+|++|.+.||+... ...+++++.||+.||.++|..+.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~mV~r~rNHPSIi~WslgNE~~~g--------~~~~~l~~~ik~~DptRpV~~~~ 491 (1010)
T 3bga_A 427 ASLAKDSTWLTAHMDRTHRMYERSKNHPAIVIWSQGNEAGNG--------INFERTYDWLKSVEKGRPVQYER 491 (1010)
T ss_dssp TCTTTCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSSCCS--------HHHHHHHHHHHHHCSSSCEECGG
T ss_pred CcCCCCHHHHHHHHHHHHHHHHHhCCCCEEEEEECccCcCcH--------HHHHHHHHHHHHHCCCCcEEeCC
Confidence 111111567788889999999999999999999999999742 24678899999999999987654
|
| >1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.1e-09 Score=110.89 Aligned_cols=214 Identities=18% Similarity=0.249 Sum_probs=137.7
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---ecCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV---DLHALRVSQNGSPHSGSR 257 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIl---dlH~~pg~~ng~~~sg~~ 257 (535)
+.+++.|...+||.|++ .+. |..++|.++. | .+..+|+++++|+++||+|.. -+|..
T Consensus 27 ~~~~~~~~~~~fn~vt~eN~~k-W~~~ep~~g~-~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q------------- 88 (313)
T 1v0l_A 27 DSTYTSIAGREFNMVTAENEMK-IDATEPQRGQ-F---NFSSADRVYNWAVQNGKQVRGHTLAWHSQ------------- 88 (313)
T ss_dssp CHHHHHHHHHHCSEEEESSTTS-HHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEECSSS-------------
T ss_pred CHHHHHHHHhcCCEEEECCccc-HHHhCCCCCc-c---CchHHHHHHHHHHHCCCEEEEEeecCcCc-------------
Confidence 36788888899999999 455 4778888875 6 678999999999999999863 23421
Q ss_pred CCCCCC----C-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC----hHHH----HHHHHHHHHHHHhcCCC
Q 046395 258 DGFQEW----S-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK----LDSL----KTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 258 ~~~~~W----~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~----~~~~----~~~~~~~~~aIR~~~p~ 324 (535)
.+.| . +..++...++++.+++||++ .|..|++.|||...+.+ ...+ .+|++.+++++|+.+|+
T Consensus 89 --~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g--~i~~wdv~NE~~~~~g~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~ 164 (313)
T 1v0l_A 89 --QPGWMQSLSGSALRQAMIDHINGVMAHYKG--KIVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPS 164 (313)
T ss_dssp --CCHHHHTCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTT
T ss_pred --CchhhhcCCHHHHHHHHHHHHHHHHHHcCC--cceEEeeecccccCCCcccccCcHHHhhhHHHHHHHHHHHHhhCCC
Confidence 1222 2 46788899999999999998 58899999999864211 1112 46899999999999999
Q ss_pred cEEEEcCCCC--C-C-h--hh-------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcC
Q 046395 325 AYVILSNRLG--G-E-W--SE-------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD 391 (535)
Q Consensus 325 ~~ii~~~~~g--~-~-~--~~-------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~ 391 (535)
..+++.+ |+ . . . .. +......-+.+-+..|+...+. +.+. ++ +.|..+.. .
T Consensus 165 a~L~~Nd-yn~~~~~~~k~~~~~~~v~~l~~~G~~iDgIG~Q~H~~~~~~------~~~~----~~----~~l~~~a~-~ 228 (313)
T 1v0l_A 165 AKLCYND-YNVENWTWAKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGSP------YNSN----FR----TTLQNFAA-L 228 (313)
T ss_dssp SEEEEEE-SSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT----HH----HHHHHHHT-T
T ss_pred CEEEEec-cccccCChHHHHHHHHHHHHHHHCCCCcceEEEeEEccCCCC------CHHH----HH----HHHHHHHh-c
Confidence 9988753 22 1 1 0 11 1111122355556668653211 1111 11 22333443 3
Q ss_pred CCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 392 GPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 392 ~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
+.|++|+|++... ...+.|+++++..++. ....|-++|.+...
T Consensus 229 G~pv~iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D~ 271 (313)
T 1v0l_A 229 GVDVAITELDIQG----APASTYANVTNDCLAV--SRCLGITVWGVRDS 271 (313)
T ss_dssp TCEEEEEEEEETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSBGG
T ss_pred CCeEEEEeCCccH----HHHHHHHHHHHHHHhc--CCceEEEEECCCCC
Confidence 5579999998651 2345556655543321 13368888987664
|
| >1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=99.08 E-value=1.5e-09 Score=109.33 Aligned_cols=216 Identities=16% Similarity=0.233 Sum_probs=135.5
Q ss_pred HHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEec---CCC-CCCCCCCCCCCCC
Q 046395 184 EDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL---HAL-RVSQNGSPHSGSR 257 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~-pg~~ng~~~sg~~ 257 (535)
.+.+.| +.+||.|++ .+.| ..++|.+|. | .+..+|++|++|+++||+|.... |.. |+ |....
T Consensus 30 ~~~~~~-~~~fn~vt~en~~kW-~~~ep~~g~-~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~----W~~~~-- 97 (303)
T 1ta3_B 30 QNEAIV-ASQFGVITPENSMKW-DALEPSQGN-F---GWSGADYLVDYATQHNKKVRGHTLVWHSQLPS----WVSSI-- 97 (303)
T ss_dssp HHHHHH-HHHCSEEEESSTTSH-HHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCH----HHHTC--
T ss_pred HHHHHH-HhhCCEEEECccccH-HHhCCCCCc-c---CchHHHHHHHHHHHCCCEEEEeeccccCCCCh----hhhcC--
Confidence 455556 679999999 5654 778888875 6 57899999999999999997533 421 11 11000
Q ss_pred CCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----C-h-HHH-HHHHHHHHHHHHhcCCCcEEEE
Q 046395 258 DGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----K-L-DSL-KTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 258 ~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~-~-~~~-~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
.. +..++...++++.+++||++ .|.+|++.|||...+. + . ..+ .+|++.+++++|+.+|+..+++
T Consensus 98 -----~~~~~~~~~~~~~i~~v~~rY~g--~v~~Wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~~dP~a~L~~ 170 (303)
T 1ta3_B 98 -----GDANTLRSVMTNHINEVVGRYKG--KIMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYI 170 (303)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHTTT--SCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEE
T ss_pred -----CCHHHHHHHHHHHHHHHHHhcCC--cceEEEeecCcccCCCCcccchHHHhccHHHHHHHHHHHHHHCCCCEEEe
Confidence 02 35678899999999999998 5899999999975321 1 1 112 4788999999999999999887
Q ss_pred cCCCC---CC-h--hh---h----hcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCC-cE
Q 046395 330 SNRLG---GE-W--SE---L----LSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGP-LS 395 (535)
Q Consensus 330 ~~~~g---~~-~--~~---~----~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p-~v 395 (535)
.+ |+ .. . .. + .....+-+.+-+..|+..... ..+. ++ ..+..+... |. |+
T Consensus 171 Nd-yn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~~------~~~~----~~----~~l~~~a~~-G~~pi 234 (303)
T 1ta3_B 171 ND-YNLDSASYAKTQAMASYVKKWLAEGVPIDGIGSQAHYSSSHW------SSTE----AA----GALSSLANT-GVSEV 234 (303)
T ss_dssp EE-SCCCCTTSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTCC------CGGG----HH----HHHHHHHTT-CCSEE
T ss_pred cc-ccccCCchHHHHHHHHHHHHHHHCCCCcceEEEeeecCCCCC------CHHH----HH----HHHHHHHHC-CCCeE
Confidence 53 22 11 0 11 1 111122455556668764421 1111 11 223334433 45 79
Q ss_pred EEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 396 FVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 396 ~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
.|+|++... ...+.|.++++..++. ....|-++|.+...
T Consensus 235 ~iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D~ 273 (303)
T 1ta3_B 235 AITELDIAG----AASSDYLNLLNACLNE--QKCVGITVWGVSDK 273 (303)
T ss_dssp EEEEEEETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSBGG
T ss_pred EEeeCCcCh----hHHHHHHHHHHHHHhC--CCceEEEEecCCcC
Confidence 999998652 2345566655432221 13368888987653
|
| >1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A* | Back alignment and structure |
|---|
Probab=99.07 E-value=1.1e-10 Score=133.34 Aligned_cols=148 Identities=16% Similarity=0.139 Sum_probs=109.9
Q ss_pred cchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC------CCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL------RVSQNGSPH 253 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~------pg~~ng~~~ 253 (535)
..++++++.||++|+|+||+.|+ |...+|.++. |+-+....|+++|+.|+++||+|||-.--+ -|+.-.|..
T Consensus 36 ~~W~d~l~kmka~G~NtV~~yvf-W~~hEP~~G~-fdF~g~~dL~~fl~~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~ 113 (971)
T 1tg7_A 36 SLYIDIFEKVKALGFNCVSFYVD-WALLEGNPGH-YSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQ 113 (971)
T ss_dssp GGHHHHHHHHHTTTCCEEEEECC-HHHHCSBTTB-CCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCTTBGGGGCCGGGG
T ss_pred HHHHHHHHHHHHcCCCEEEEecc-HHHhCCCCCe-ecccchHHHHHHHHHHHHcCCEEEEecCCcccceecCCCcceeec
Confidence 44589999999999999999999 6889999886 866666679999999999999999954210 011111111
Q ss_pred CCCCCCCC-CCChHHHHHHHHHHHHHHHHhCCCC-----cEEEEEeecCCCCCCCC--hHHHHHHHHHHHHHHHhcCCCc
Q 046395 254 SGSRDGFQ-EWSDSDIQETVAIIDFLASRYADHP-----SLVAIELMNEPKAPDLK--LDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 254 sg~~~~~~-~W~~~~~~~~~~~~~~la~ry~~~p-----~V~~~el~NEP~~~~~~--~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
. ..+.. .-++.++++..+++++|++++++++ .|++|++-||......+ .+..++|++.+.+++|++++..
T Consensus 114 ~--~p~~lR~~~p~y~~~~~~~~~~l~~~~~~~~~~~ggpVI~~QveNEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~v 191 (971)
T 1tg7_A 114 R--VDGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVV 191 (971)
T ss_dssp G--CSSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCS
T ss_pred c--cCCEecCCCHHHHHHHHHHHHHHHHHHhhhhhcCCCCEEEEecccccCcccccccchhHHHHHHHHHHHHHHhCCCe
Confidence 0 00111 1127899999999999999998776 89999999999642100 0236889999999999999988
Q ss_pred EEEEcC
Q 046395 326 YVILSN 331 (535)
Q Consensus 326 ~ii~~~ 331 (535)
+++...
T Consensus 192 Pl~tn~ 197 (971)
T 1tg7_A 192 PFISND 197 (971)
T ss_dssp CBBCCB
T ss_pred eEEEec
Confidence 876654
|
| >2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=2.5e-09 Score=122.32 Aligned_cols=143 Identities=18% Similarity=0.183 Sum_probs=97.5
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++||+.||++|+|+||+ |. +..|.. +.++++|.++||+|+.|++...+ ...
T Consensus 355 ~~~l~~~k~~g~N~iR~----wg------g~~y~~------~~~~d~cD~~GilV~~e~~~~~~-------------~~~ 405 (848)
T 2je8_A 355 QTLFRDMKEANMNMVRI----WG------GGTYEN------NLFYDLADENGILVWQDFMFACT-------------PYP 405 (848)
T ss_dssp HHHHHHHHHTTCCEEEE----CT------TSCCCC------HHHHHHHHHHTCEEEEECSCBSS-------------CCC
T ss_pred HHHHHHHHHcCCcEEEe----CC------CccCCC------HHHHHHHHHcCCEEEECcccccC-------------CCC
Confidence 78999999999999999 21 111211 36889999999999999863210 001
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC----C--C--Ch----HHHH----HHHHHHHHHHHhcCCCcE
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP----D--L--KL----DSLK----TYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~----~--~--~~----~~~~----~~~~~~~~aIR~~~p~~~ 326 (535)
..+...+.+.+.++.+++|+++||+|++|.+.|||... + . +. ..+. .|.+.+.+.+|+.||+++
T Consensus 406 ~~~~~~~~~~~~~~~~v~r~~nHPSii~W~~~NE~~~~~~~w~~~~~~~~~~~~~~~~~y~~~~~~~l~~~vk~~Dptr~ 485 (848)
T 2je8_A 406 SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF 485 (848)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEEccCCCcccccccccccccCccchhhhHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 12577888999999999999999999999999999421 0 0 11 1111 255678899999999999
Q ss_pred EEEcCCCCCChhhhhcccCCCCcEEEEEeecCcC
Q 046395 327 VILSNRLGGEWSELLSFASNLSRVVIDVHFYNLF 360 (535)
Q Consensus 327 ii~~~~~g~~~~~~~~~~~~~~n~v~d~H~Y~~~ 360 (535)
+..+..++..... + ....+-+.|+|..+
T Consensus 486 v~~~S~~~g~~~~---~---~~~~~gd~hy~~~w 513 (848)
T 2je8_A 486 YVHSSPYLANWGR---P---ESWGTGDSHNWGVW 513 (848)
T ss_dssp EESSBSSSCCTTC---G---GGTTBSCEECCTTT
T ss_pred EEecCCCCCCCCC---C---CCCCCCCccccCcc
Confidence 8766543221110 1 11223468988765
|
| >2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A | Back alignment and structure |
|---|
Probab=99.04 E-value=1.6e-09 Score=114.89 Aligned_cols=214 Identities=17% Similarity=0.243 Sum_probs=137.6
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHALRVSQNGSPHSGSR 257 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~~pg~~ng~~~sg~~ 257 (535)
+++++.|...+||.|++ .+. |..++|.++. | .+..+|++|++|+++||+|... +|..
T Consensus 27 ~~~~~~~~~~~fn~~t~en~~k-w~~~ep~~g~-~---~f~~~D~~~~~a~~~gi~v~ghtlvW~~q------------- 88 (436)
T 2d1z_A 27 DSAYTTIASREFNMVTAENEMK-IDATEPQRGQ-F---NFSAGDRVYNWAVQNGKQVRGHTLAWHSQ------------- 88 (436)
T ss_dssp CHHHHHHHHHHCSEEEESSTTS-HHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEECSTT-------------
T ss_pred CHHHHHHHHHhCCeeeeccccc-cccccCCCCc-c---ChHHHHHHHHHHHHCCCEEEEEEEEeCCC-------------
Confidence 36788888899999999 455 5778888875 6 5789999999999999998542 2321
Q ss_pred CCCCCC----C-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC-------ChHHH-HHHHHHHHHHHHhcCCC
Q 046395 258 DGFQEW----S-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL-------KLDSL-KTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 258 ~~~~~W----~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~-------~~~~~-~~~~~~~~~aIR~~~p~ 324 (535)
.+.| . +..++...++++.+++||++ .|..|++.|||..... ....+ .+|++.+++++|+.+|+
T Consensus 89 --~P~W~~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~w~v~NE~~~~~~~g~~~~~~~~~~g~~~i~~af~~Ar~~dP~ 164 (436)
T 2d1z_A 89 --QPGWMQSLSGSTLRQAMIDHINGVMGHYKG--KIAQWDVVSHAFSDDGSGGRRDSNLQRTGNDWIEVAFRTARAADPA 164 (436)
T ss_dssp --CCHHHHTCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEESCBCSSSSCCBCCCTTGGGCTTHHHHHHHHHHHHCTT
T ss_pred --CchhhhcCCHHHHHHHHHHHHHHHHHhcCC--ceEEEEeecccccCCCCccccCchhhhcchHHHHHHHHHHHhhCCC
Confidence 1222 2 56788899999999999997 8889999999975321 11122 57899999999999999
Q ss_pred cEEEEcCCCC-C--C----------hhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcC
Q 046395 325 AYVILSNRLG-G--E----------WSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD 391 (535)
Q Consensus 325 ~~ii~~~~~g-~--~----------~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~ 391 (535)
..+++.+ |+ . . ...+..-..+.+.+-+..|+...+. ..+. ++ ..|..+.+ .
T Consensus 165 a~l~~Nd-yn~~~~~~~k~~~~~~~v~~l~~~g~~iDgiG~q~H~~~~~~------~~~~----~~----~~l~~~a~-~ 228 (436)
T 2d1z_A 165 AKLCYND-YNIENWTWAKTQGVYNMVRDFKQRGVPIDCVGFQSHFNSGSP------YNSN----FR----TTLQNFAA-L 228 (436)
T ss_dssp SEEEEEE-SSCCSTTSHHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTT----HH----HHHHHHHT-T
T ss_pred CEEEEec-cccccCChhHHHHHHHHHHHHHhCCCcccEEEEeeEEcCCCC------CHHH----HH----HHHHHHHH-c
Confidence 9988743 22 1 1 0111111123345555557643211 1111 11 12333443 3
Q ss_pred CCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 392 GPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 392 ~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
+.|++|.|++... ...+.|.++++..++. ....|-++|.+...
T Consensus 229 g~~v~iTEldv~~----~qa~~y~~~~~~~~~~--~~~~gvt~Wg~~d~ 271 (436)
T 2d1z_A 229 GVDVAITELDIQG----ASSSTYAAVTNDCLAV--SRCLGITVWGVRDT 271 (436)
T ss_dssp TCEEEEEEEEETT----CCHHHHHHHHHHHHTC--TTEEEEEESCSBGG
T ss_pred CCeEEEeecchhH----HHHHHHHHHHHHHHhc--CCceEEEeccccCC
Confidence 5679999998651 2345556655443221 12368889987653
|
| >3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.02 E-value=6.1e-09 Score=117.84 Aligned_cols=118 Identities=14% Similarity=0.118 Sum_probs=87.9
Q ss_pred chHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGF 260 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~ 260 (535)
..++||+.||++|+|+||+.-. +. -++++++|.++||+|+.++... |.......
T Consensus 308 ~~~~dl~~~K~~G~N~iR~~h~--------p~----------~~~~~dlcDe~GilV~~E~~~~------w~~~~~~~-- 361 (801)
T 3gm8_A 308 LLHYRLKLLKDMGCNAIRTSHN--------PF----------SPAFYNLCDTMGIMVLNEGLDG------WNQPKAAD-- 361 (801)
T ss_dssp HHHHHHHHHHHTTCCEEEETTS--------CC----------CHHHHHHHHHHTCEEEEECCSS------SSSCSSTT--
T ss_pred HHHHHHHHHHHCCCcEEEecCC--------CC----------cHHHHHHHHHCCCEEEECCchh------hcCCCCcc--
Confidence 3479999999999999999321 11 1458999999999999997421 11111001
Q ss_pred CCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 261 QEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 261 ~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
.+.+...+...+.++.|.+|+++||+|++|.+.||+.+ .+ ..+++++++.+|+.||.+++..+.
T Consensus 362 -~~~~~~~~~~~~~~~~mv~r~rNHPSIi~Ws~gNE~~g--~~----~~~~~~l~~~~k~~DptRpvt~~~ 425 (801)
T 3gm8_A 362 -DYGNYFDEWWQKDMTDFIKRDRNHPSIIMWSIGNEVTG--AT----PEIQHNLVSLFHQLDPDRPVTQGG 425 (801)
T ss_dssp -SGGGTHHHHHHHHHHHHHHHHTTCTTEEEEEEEESCSS--CC----HHHHHHHHHHHHHHCTTSCEEEET
T ss_pred -cccHHHHHHHHHHHHHHHHhcCCCCeEEEEECccCCCC--cH----HHHHHHHHHHHHHHCCCCCEEEcc
Confidence 11134555666788999999999999999999999953 22 578899999999999999988764
|
| >1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A | Back alignment and structure |
|---|
Probab=99.02 E-value=4.6e-09 Score=105.92 Aligned_cols=209 Identities=18% Similarity=0.270 Sum_probs=133.8
Q ss_pred HHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCCCCCCCCCCCCC
Q 046395 185 DFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQNGSPHSGSRDG 259 (535)
Q Consensus 185 D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ng~~~sg~~~~ 259 (535)
+.+.| +.+||.|++ .+. |..++|.+|. | .+..+|++|++|+++||.|.... |..
T Consensus 32 ~~~~~-~~~fn~vt~en~~k-W~~~ep~~g~-~---~f~~~D~~v~~a~~~gi~v~ghtl~W~~q--------------- 90 (303)
T 1i1w_A 32 NAAII-QANFGQVTPENSMK-WDATEPSQGN-F---NFAGADYLVNWAQQNGKLIRGHTLVWHSQ--------------- 90 (303)
T ss_dssp HHHHH-HHHCSEEEESSTTS-HHHHCSBTTB-C---CCHHHHHHHHHHHHHTCEEEEEEEECSTT---------------
T ss_pred HHHHH-HhhCCEEEECcccc-HHHhCCCCCc-c---ChhhHHHHHHHHHHCCCEEEEeeccccCC---------------
Confidence 45555 779999998 555 5778898875 6 57899999999999999996432 321
Q ss_pred CCCC-----C-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC--hHHH-----HHHHHHHHHHHHhcCCCcE
Q 046395 260 FQEW-----S-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK--LDSL-----KTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 260 ~~~W-----~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~--~~~~-----~~~~~~~~~aIR~~~p~~~ 326 (535)
.+.| . +..++...++++.+++||++ .|.+|++.|||...... ...| .+|++.+++++|+.+|+..
T Consensus 91 ~P~W~~~~~~~~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NE~~~~~g~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~ 168 (303)
T 1i1w_A 91 LPSWVSSITDKNTLTNVMKNHITTLMTRYKG--KIRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAK 168 (303)
T ss_dssp CCHHHHTCCCHHHHHHHHHHHHHHHHHHTTT--SCSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSE
T ss_pred CChHHhcCCCHHHHHHHHHHHHHHHHHhcCC--ceeEEEeecCccCCCCCcccchHHHhcCHHHHHHHHHHHHHHCCCCe
Confidence 1122 2 34678899999999999998 59999999999753211 0111 3588999999999999999
Q ss_pred EEEcCCCC---CC-h--hh-------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCC
Q 046395 327 VILSNRLG---GE-W--SE-------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGP 393 (535)
Q Consensus 327 ii~~~~~g---~~-~--~~-------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p 393 (535)
+++.+ |+ .. . .. +.....+.+.+-+..|+.... . +.++ ..+..+... +.
T Consensus 169 L~~Nd-yn~~~~~~~k~~~~~~~v~~l~~~G~~iDgiG~Q~H~~~~~--------~----~~~~----~~l~~~a~~-G~ 230 (303)
T 1i1w_A 169 LYIND-YNLDSASYPKTQAIVNRVKKWRAAGVPIDGIGSQTHLSAGQ--------G----ASVL----QALPLLASA-GT 230 (303)
T ss_dssp EEEEE-SSCCCSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEECTTT--------H----HHHH----HHHHHHHTT-CC
T ss_pred EEecc-ccccCCChHHHHHHHHHHHHHHHCCCcccEEEeccccCCCC--------H----HHHH----HHHHHHHHC-CC
Confidence 88753 21 11 0 11 111112234454555764321 1 2222 234444444 45
Q ss_pred -cEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 394 -LSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 394 -~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
|++|+|++... ...+.|.++++..++. ....|-++|.+...
T Consensus 231 ~pi~iTEldi~~----~qa~~y~~~~~~~~~~--~~v~git~Wg~~D~ 272 (303)
T 1i1w_A 231 PEVAITELDVAG----ASSTDYVNVVNACLNV--SSCVGITVWGVADP 272 (303)
T ss_dssp SEEEEEEEEETT----CCHHHHHHHHHHHHHC--TTEEEEEESCSBGG
T ss_pred CeEEEEeCCccc----hHHHHHHHHHHHHHhC--CCceEEEEEcCCCC
Confidence 79999998652 2345566666543331 23468889987763
|
| >1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.7e-08 Score=103.07 Aligned_cols=135 Identities=16% Similarity=0.209 Sum_probs=98.0
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCCC-CCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHAL-RVSQNGSPHSGS 256 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~~-pg~~ng~~~sg~ 256 (535)
.++.+.| +.+||.|++ .+. |..++|.++. | .+..+|++|++|+++||+|... +|.. |+ |... .
T Consensus 28 ~~~~~~~-~~~fn~vt~eN~~k-W~~~ep~~g~-~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~----W~~~-~ 96 (331)
T 1n82_A 28 EMQKQLL-IDHVNSITAENHMK-FEHLQPEEGK-F---TFQEADRIVDFACSHRMAVRGHTLVWHNQTPD----WVFQ-D 96 (331)
T ss_dssp HHTHHHH-HHHCSEEEESSTTS-HHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCG----GGGB-C
T ss_pred HHHHHHH-HhcCCEEEECCccc-HHHhCCCCCc-c---ChHHHHHHHHHHHHCCCEEEEEeeecCCCCCh----hhcc-C
Confidence 3566666 569999999 455 4778888875 6 5789999999999999999643 3642 21 2110 0
Q ss_pred CCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC--------hHHH-HHHHHHHHHHHHhcCCCcE
Q 046395 257 RDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK--------LDSL-KTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 257 ~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~--------~~~~-~~~~~~~~~aIR~~~p~~~ 326 (535)
..+.+ .. +...+...++++.+++||++ .|.+|++.|||...... ...+ .+|++.+++++|+.+|+..
T Consensus 97 ~~g~~-~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~g~~~~r~s~~~~~~g~~~i~~af~~Ar~~dP~a~ 173 (331)
T 1n82_A 97 GQGHF-VSRDVLLERMKCHISTVVRRYKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDAL 173 (331)
T ss_dssp SSSSB-CCHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSE
T ss_pred CCCCC-CCHHHHHHHHHHHHHHHHHHhcC--CceEEeeecccccCCCccccccchHHHhcCHHHHHHHHHHHHHHCCCCE
Confidence 01111 22 56788999999999999999 79999999999863211 0111 3688999999999999998
Q ss_pred EEEcC
Q 046395 327 VILSN 331 (535)
Q Consensus 327 ii~~~ 331 (535)
+++.+
T Consensus 174 L~~Nd 178 (331)
T 1n82_A 174 LFYND 178 (331)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 87743
|
| >3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus} | Back alignment and structure |
|---|
Probab=98.99 E-value=2.9e-10 Score=121.19 Aligned_cols=112 Identities=18% Similarity=0.335 Sum_probs=79.8
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCC---------CCCC--CCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA---------LRVS--QNGS 251 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~---------~pg~--~ng~ 251 (535)
+++++.||++|+|+||++| .|...+|.+|. | .++.||++|+.|+++||+|||.+.. .|.- ....
T Consensus 76 ~~~W~~mKa~G~NtVr~~V-~W~~hEP~~G~-y---DF~~LD~~ldla~e~GL~VIL~i~aeW~~ggta~~P~WL~~d~~ 150 (552)
T 3u7v_A 76 AKVWPAIEKVGANTVQVPI-AWEQIEPVEGQ-F---DFSYLDLLLEQARERKVRLVLLWFGTWKNSSPSYAPEWVKLDDK 150 (552)
T ss_dssp HHHHHHHHHHTCSEEEEEE-EHHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEEEEETTBCTTSCHHHHTCTT
T ss_pred HHHHHHHHHhCCCEEEEEe-hhhccCCCCCc-c---ChhhHHHHHHHHHHCCCEEEEEeccccccCCCcCCCchhhcCcc
Confidence 5666699999999999999 56888998876 7 4677999999999999999997331 1110 0000
Q ss_pred CC------CCCCC-CCCCCChH----HHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 252 PH------SGSRD-GFQEWSDS----DIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 252 ~~------sg~~~-~~~~W~~~----~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
.+ .|.+. ..+..++. ..+.+.++++.|++||+++|.|++|++-||+..
T Consensus 151 ~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r~~~~p~VI~wQIeNEyG~ 209 (552)
T 3u7v_A 151 RFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAKDAAQKTVIMVQVENETGT 209 (552)
T ss_dssp TSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEEESCSB
T ss_pred cCceeECCCCcEeecCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecccCCC
Confidence 00 00000 01222233 366777888899999999999999999999975
|
| >3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=3e-09 Score=115.64 Aligned_cols=144 Identities=14% Similarity=0.142 Sum_probs=102.1
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC------CCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL------RVSQNGSPHSG 255 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~------pg~~ng~~~sg 255 (535)
++++++.||++|+|+||+.|.| ...+|.+|. |+-+....|+++|+.|+++||+|||..--+ -|+--.|....
T Consensus 42 W~d~l~kmKa~G~NtV~~yv~W-~~hEP~~G~-fdF~g~~DL~~fl~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~ 119 (654)
T 3thd_A 42 WKDRLLKMKMAGLNAIQTYVPW-NFHEPWPGQ-YQFSEDHDVEYFLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEK 119 (654)
T ss_dssp HHHHHHHHHHTTCSEEEEECCH-HHHCSBTTB-CCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGS
T ss_pred HHHHHHHHHHcCCCEEEEEech-hhcCCCCCc-cCccchHHHHHHHHHHHHcCCEEEeccCCccccccCCCcCChHHhcC
Confidence 3899999999999999997775 788998876 866655669999999999999999964211 01111111100
Q ss_pred CCCC-CCCCChHHHHHHHHHHHHHHHH-----hCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhc-CCCcEEE
Q 046395 256 SRDG-FQEWSDSDIQETVAIIDFLASR-----YADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKY-SSSAYVI 328 (535)
Q Consensus 256 ~~~~-~~~W~~~~~~~~~~~~~~la~r-----y~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~-~p~~~ii 328 (535)
... ...-++.+++...++++.|+++ |++++.|++|++-||......+. +.|++.+.+..|+. +-..+++
T Consensus 120 -p~i~~Rt~~p~y~~~~~~~~~~l~~~l~~~~~~~ggpVI~~QvENEyG~y~~~d---~~Ym~~l~~~~~~~~Gi~v~l~ 195 (654)
T 3thd_A 120 -ESILLRSSDPDYLAAVDKWLGVLLPKMKPLLYQNGGPVITVQVENEYGSYFACD---FDYLRFLQKRFRHHLGDDVVLF 195 (654)
T ss_dssp -TTCCSSSCCHHHHHHHHHHHHHHHHHHGGGBGGGTSSEEEEECSSCGGGSSCCC---HHHHHHHHHHHHHHHCSSSEEE
T ss_pred -CCceEecCCHHHHHHHHHHHHHHHHHhhhhhccCCCCEEEEEeccccccccccc---HHHHHHHHHHHHHhcCCceeeE
Confidence 000 0011268899999999999999 88899999999999987532222 46667777777775 5556655
Q ss_pred EcC
Q 046395 329 LSN 331 (535)
Q Consensus 329 ~~~ 331 (535)
.++
T Consensus 196 t~D 198 (654)
T 3thd_A 196 TTD 198 (654)
T ss_dssp EEE
T ss_pred eec
Confidence 544
|
| >2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} | Back alignment and structure |
|---|
Probab=98.95 E-value=1.3e-08 Score=104.92 Aligned_cols=233 Identities=13% Similarity=0.129 Sum_probs=137.7
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCCC-CCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHAL-RVSQNGSPHSGS 256 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~~-pg~~ng~~~sg~ 256 (535)
.++.+.| +.+||.|++ .+. |..++|.+|. | .+..+|++|++|+++||+|+.. +|.. |.-... +..|.
T Consensus 29 ~~~~~l~-~~~fn~vt~en~~k-W~~~ep~~g~-~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~W~~~-~~~g~ 101 (356)
T 2dep_A 29 GQIAELY-KKHVNMLVAENAMK-PASLQPTEGN-F---QWADADRIVQFAKENGMELRFHTLVWHNQTPDWFFL-DKEGK 101 (356)
T ss_dssp HHHHHHH-HHHCSEEEESSTTS-HHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCGGGGB-CTTSS
T ss_pred HHHHHHH-HhhCCEEEECCccc-HHHhcCCCCc-c---CchHHHHHHHHHHHCCCEEEEeeccccccCchhhhc-cCcCC
Confidence 3566666 689999999 554 5788888875 7 5789999999999999999753 3532 221000 00111
Q ss_pred ------CCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC--C-----h-HHH-HHHHHHHHHHHHh
Q 046395 257 ------RDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL--K-----L-DSL-KTYYKAGYDTVRK 320 (535)
Q Consensus 257 ------~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~--~-----~-~~~-~~~~~~~~~aIR~ 320 (535)
+....... +..++...++++.+++||++ .|.+|++.|||..... . . ..+ .+|++.+++++|+
T Consensus 102 ~~~~g~r~~~~~~~~~~~~~~~~~~i~~v~~rY~g--~v~~wdv~NE~~~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar~ 179 (356)
T 2dep_A 102 PMVEETDPQKREENRKLLLQRLENYIRAVVLRYKD--DIKSWDVVNEVIEPNDPGGMRNSPWYQITGTEYIEVAFRATRE 179 (356)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEECCBCTTSGGGBCCCHHHHHHTTHHHHHHHHHHHH
T ss_pred ccccccccccCCCCHHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCCCCCccCChHHHhccHHHHHHHHHHHHH
Confidence 00000111 45678889999999999999 7999999999986321 0 0 112 4688999999999
Q ss_pred -cCCCcEEEEcCCCC-CCh---hh-------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHh
Q 046395 321 -YSSSAYVILSNRLG-GEW---SE-------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVT 388 (535)
Q Consensus 321 -~~p~~~ii~~~~~g-~~~---~~-------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~ 388 (535)
.+|+..+++.+ |+ ... .. +.....+-+.+-+..|+...+ .+ .+.++. .|..+.
T Consensus 180 ~~dP~a~L~~Nd-yn~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~------p~----~~~~~~----~l~~~a 244 (356)
T 2dep_A 180 AGGSDIKLYIND-YNTDDPVKRDILYELVKNLLEKGVPIDGVGHQTHIDIYN------PP----VERIIE----SIKKFA 244 (356)
T ss_dssp HHCSSSEEEEEE-SCTTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSC------SC----HHHHHH----HHHHHH
T ss_pred hcCCCcEEEecc-ccccCcchHHHHHHHHHHHHHCCCCccEEEeeeeecCCC------CC----HHHHHH----HHHHHH
Confidence 99999988854 32 111 11 111112234444445764211 11 222222 233444
Q ss_pred hcCCCcEEEeccCCCcCCC--------CCCHH---HHHHHHHHHHHHHhhC---CcceEEEeeeeC
Q 046395 389 TSDGPLSFVGEWSCEWEAE--------GASKR---DYQRFAEAQLDVYGRA---TFGWAYWAYKFA 440 (535)
Q Consensus 389 ~~~~p~v~vGEfg~~~~~~--------~~~~~---~~~~~~~~ql~~~~~~---~~Gw~~W~~k~~ 440 (535)
.. +.|+.|+|++...... ..+.+ ...++++..++++.+. ..|-++|.+...
T Consensus 245 ~~-Glpi~iTEldv~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~gvt~Wg~~D~ 309 (356)
T 2dep_A 245 GL-GLDNIITELDMSIYSWNDRSDYGDSIPDYILTLQAKRYQELFDALKENKDIVSAVVFWGISDK 309 (356)
T ss_dssp TT-TCEEEEEEEEEESSCTTCCCCCCSCCCHHHHHHHHHHHHHHHHHHHTTGGGEEEEEESCSBTT
T ss_pred hC-CCeEEEeeceecCCCccccccccCCCCHHHHHHHHHHHHHHHHHHHhhcCCeeEEEEecCccC
Confidence 33 5579999998653211 11111 1223444455555442 247889988664
|
| >1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A | Back alignment and structure |
|---|
Probab=98.90 E-value=8.8e-09 Score=110.29 Aligned_cols=137 Identities=14% Similarity=0.225 Sum_probs=99.5
Q ss_pred HHHHHHHHHcCCCEEEeC-CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIP-VGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHALRVSQNGSPHSGSRD 258 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~~pg~~ng~~~sg~~~ 258 (535)
+++.+.| +.+||.|++. ..-|..++|.++. | .+..+|++|++|+++||+|... +|. +....+|... ..
T Consensus 195 ~~~~~l~-~~~FN~vT~eNemKW~~iEP~~G~-~---~f~~~D~ivd~a~~nGi~VrgHtLvWhs-~~q~P~Wv~~--~~ 266 (530)
T 1us2_A 195 SREQAVV-KKHFNHLTAGNIMKMSYMQPTEGN-F---NFTNADAFVDWATENNMTVHGHALVWHS-DYQVPNFMKN--WA 266 (530)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEECCC-GGGSCHHHHT--CC
T ss_pred HHHHHHH-HhhCCeEEECCcccHHHhcCCCCc-c---CchHHHHHHHHHHHCCCEEEEecccccc-cccCchHHhc--CC
Confidence 3677777 6799999996 3345788888875 6 5799999999999999999843 343 0001111110 00
Q ss_pred CCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----C--hHHH-----H--HHHHHHHHHHHhcCCC
Q 046395 259 GFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----K--LDSL-----K--TYYKAGYDTVRKYSSS 324 (535)
Q Consensus 259 ~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~--~~~~-----~--~~~~~~~~aIR~~~p~ 324 (535)
+ . +..++...++++.+++||++++.|..|++.|||..... . ...| . +|++.+++++|+.+|+
T Consensus 267 G----s~~~l~~~~~~~I~~vv~rYk~~g~I~~WdV~NE~~~~~g~~~~r~~~s~w~~~lG~~~d~i~~AF~~Ar~aDP~ 342 (530)
T 1us2_A 267 G----SAEDFLAALDTHITTIVDHYEAKGNLVSWDVVNAAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADPA 342 (530)
T ss_dssp S----CHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEESCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCTT
T ss_pred C----CHHHHHHHHHHHHHHHHHHhCCCCceEEEEeecCcccCCccccccccCCHHHHHhCcHHHHHHHHHHHHHHHCCC
Confidence 1 2 46788899999999999998889999999999986321 0 1112 1 7999999999999999
Q ss_pred cEEEEcC
Q 046395 325 AYVILSN 331 (535)
Q Consensus 325 ~~ii~~~ 331 (535)
..+++.+
T Consensus 343 AkL~~ND 349 (530)
T 1us2_A 343 VILYYND 349 (530)
T ss_dssp SEEEEEE
T ss_pred CEEEecc
Confidence 9887743
|
| >2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2e-08 Score=103.29 Aligned_cols=228 Identities=14% Similarity=0.180 Sum_probs=136.3
Q ss_pred HHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCCC-CCCCCCCCCCCCC
Q 046395 184 EDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHAL-RVSQNGSPHSGSR 257 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~~-pg~~ng~~~sg~~ 257 (535)
++.+.| +.+||.|++ .+.| ..++|.+|. | .+..+|++|++|+++||+|... +|.. |. |... ..
T Consensus 33 ~~~~l~-~~~fn~vt~en~~kW-~~~ep~~G~-~---~f~~~D~~v~~a~~~gi~v~ghtlvW~~q~P~----W~~~-~~ 101 (356)
T 2uwf_A 33 RQAQIL-KHHYNSLVAENAMKP-VSLQPREGE-W---NWEGADKIVEFARKHNMELRFHTLVWHSQVPE----WFFI-DE 101 (356)
T ss_dssp HHHHHH-HHHCSEEEESSTTSH-HHHCSBTTB-C---CCHHHHHHHHHHHHHTCEEEECCSEESSSCCG----GGGB-CT
T ss_pred HHHHHH-HhcCCEEEECCcccH-HHhcCCCCc-c---CchHHHHHHHHHHHCCCEEEEeeccccccCch----hHhc-CC
Confidence 555556 689999999 5554 778888775 6 6789999999999999999752 2432 22 1110 00
Q ss_pred CCCC----------CCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----C-h-HHH-HHHHHHHHHHHH
Q 046395 258 DGFQ----------EWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----K-L-DSL-KTYYKAGYDTVR 319 (535)
Q Consensus 258 ~~~~----------~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~-~-~~~-~~~~~~~~~aIR 319 (535)
.|.. ... +...+...++++.+++||++ .|.+|++.|||...+. + . ..+ .+|+..+++++|
T Consensus 102 ~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~v~~wdv~NE~~~~~g~~r~s~~~~~~G~~~i~~af~~Ar 179 (356)
T 2uwf_A 102 NGNRMVDETDPEKRKANKQLLLERMENHIKTVVERYKD--DVTSWDVVNEVIDDDGGLRESEWYQITGTDYIKVAFETAR 179 (356)
T ss_dssp TSCBGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHH
T ss_pred CCcccccccccccCCCCHHHHHHHHHHHHHHHHHHcCC--cceEEEeecccccCCCCcccchHHhhccHHHHHHHHHHHH
Confidence 1110 111 34567888999999999998 8999999999986321 1 0 122 368899999999
Q ss_pred h-cCCCcEEEEcCCCC-CCh---h-------hhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHH
Q 046395 320 K-YSSSAYVILSNRLG-GEW---S-------ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNV 387 (535)
Q Consensus 320 ~-~~p~~~ii~~~~~g-~~~---~-------~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~ 387 (535)
+ .+|+..+++.+ |+ ... . .+......-+.+-+..|....+. + .+.++ ..|..+
T Consensus 180 ~~~dP~a~L~~Nd-yn~~~~~k~~~~~~~v~~l~~~G~~idgiG~Q~H~~~~~p------~----~~~~~----~~l~~~ 244 (356)
T 2uwf_A 180 KYGGEEAKLYIND-YNTEVPSKRDDLYNLVKDLLEQGVPIDGVGHQSHIQIGWP------S----IEDTR----ASFEKF 244 (356)
T ss_dssp HHHCTTCCEEEEE-SCTTSHHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCS------C----HHHHH----HHHHHH
T ss_pred hhCCCCCEEEecc-ccccccchhHHHHHHHHHHHHCCCcccEEEEEEecCCCCC------C----HHHHH----HHHHHH
Confidence 9 99999888753 32 111 1 11111122355556668653211 1 22222 223444
Q ss_pred hhcCCCcEEEeccCCCcCCCC----------CCH---HHHHHHHHHHHHHHhh---CCcceEEEeeeeC
Q 046395 388 TTSDGPLSFVGEWSCEWEAEG----------ASK---RDYQRFAEAQLDVYGR---ATFGWAYWAYKFA 440 (535)
Q Consensus 388 ~~~~~p~v~vGEfg~~~~~~~----------~~~---~~~~~~~~~ql~~~~~---~~~Gw~~W~~k~~ 440 (535)
... +.|+.|+|+........ .+. +...++++..+.++.+ ...|-++|.+...
T Consensus 245 a~~-Gl~i~iTElDi~~~~~~~~~~~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~~v~git~WG~~D~ 312 (356)
T 2uwf_A 245 TSL-GLDNQVTELDMSLYGWPPTGAYTSYDDIPEELFQAQADRYDQLFELYEELSATISSVTFWGIADN 312 (356)
T ss_dssp HTT-TCEEEEEEEEEESSCSSCTTCCSSGGGSCHHHHHHHHHHHHHHHHHHHHTGGGEEEEEESSSSTT
T ss_pred Hhc-CCcEEEEeccccCCCCccccccccccCCChHHHHHHHHHHHHHHHHHHhccCCEEEEEEECCCCC
Confidence 433 55799999975432110 111 1112344444555543 2358888887653
|
| >1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* | Back alignment and structure |
|---|
Probab=98.87 E-value=4.2e-08 Score=101.65 Aligned_cols=136 Identities=15% Similarity=0.219 Sum_probs=99.2
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---ecCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV---DLHALRVSQNGSPHSGSR 257 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIl---dlH~~pg~~ng~~~sg~~ 257 (535)
.++.+.| +.+||.||+ .+.| ..++|.+|. | .+..+|++|++|+++||+|.. -+|.... +|... ..
T Consensus 51 ~~~~~l~-~~~fn~vt~eN~~kW-~~~ep~~G~-~---~f~~~D~~v~~a~~~gi~vrgHtlvW~~q~P---~W~~~-d~ 120 (378)
T 1ur1_A 51 ERLNTLI-AKEFNSITPENCMKW-GVLRDAQGQ-W---NWKDADAFVAFGTKHNLHMVGHTLVWHSQIH---DEVFK-NA 120 (378)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSH-HHHBCTTCC-B---CCHHHHHHHHHHHHTTCEEEEEEEECSSSSC---GGGTB-CT
T ss_pred HHHHHHH-HccCCeEEECCcccH-HHhcCCCCc-c---CchHHHHHHHHHHHCCCEEEeecccccccCc---hhhhc-CC
Confidence 5666677 569999999 5654 778888876 7 578999999999999999964 3464211 12111 00
Q ss_pred CCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----C--hHHH-HHHHHHHHHHHHhcCCCcEEEE
Q 046395 258 DGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----K--LDSL-KTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 258 ~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~--~~~~-~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
.+. .+. +...+...++++.+++||++ .|.+|++.|||...+. + ...+ .+|++.+++++|+.+|+..+++
T Consensus 121 ~g~-~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdv~NE~~~~~g~~r~s~~~~~lG~d~i~~af~~Ar~~dP~a~L~~ 197 (378)
T 1ur1_A 121 DGS-YISKAALQKKMEEHITTLAGRYKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMY 197 (378)
T ss_dssp TSC-BCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCC-CCCHHHHHHHHHHHHHHHHHHhCC--cceEEEeecccccCCCCccCChhhhhccHHHHHHHHHHHHHhCCCCEEEe
Confidence 111 233 56788999999999999999 8999999999986421 1 1112 4688999999999999998887
Q ss_pred cC
Q 046395 330 SN 331 (535)
Q Consensus 330 ~~ 331 (535)
.+
T Consensus 198 Nd 199 (378)
T 1ur1_A 198 ND 199 (378)
T ss_dssp EE
T ss_pred cc
Confidence 43
|
| >1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A | Back alignment and structure |
|---|
Probab=98.81 E-value=7.6e-08 Score=98.76 Aligned_cols=130 Identities=15% Similarity=0.175 Sum_probs=95.5
Q ss_pred HHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCCCCCCCCCCCCCCCCC
Q 046395 184 EDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHALRVSQNGSPHSGSRD 258 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~~pg~~ng~~~sg~~~ 258 (535)
++.+.| ..+||.|++ -+. |..++|.+| | .+..+|++|++|+++||+|... +|. +....+|...
T Consensus 29 ~~~~~~-~~~fn~vt~en~~k-W~~~ep~~G--~---~f~~~D~~v~~a~~~gi~v~ghtl~W~~-~~q~P~W~~~---- 96 (348)
T 1w32_A 29 ARQNIV-RAEFNQITAENIMK-MSYMYSGSN--F---SFTNSDRLVSWAAQNGQTVHGHALVWHP-SYQLPNWASD---- 96 (348)
T ss_dssp HHHHHH-HHHCSEEEESSTTS-GGGGEETTE--E---CCHHHHHHHHHHHHTTCEEEEEEEECCC-GGGCCTTCST----
T ss_pred HHHHHH-HhhCCeEEECCccc-hhhhccCCC--C---CchHHHHHHHHHHHCCCEEEEEeeecCc-cccCchhhhc----
Confidence 566666 679999999 444 477788776 5 5789999999999999999853 343 1111112110
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC-----C-----C------hHHH--HHHHHHHHHHHHh
Q 046395 259 GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD-----L-----K------LDSL--KTYYKAGYDTVRK 320 (535)
Q Consensus 259 ~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~-----~-----~------~~~~--~~~~~~~~~aIR~ 320 (535)
..+..++...++++.+++||++ .|..|++.|||.... . . .+.+ .+|+..+++++|+
T Consensus 97 ----~~~~~~~~~~~~i~~v~~rY~g--~i~~wdv~NE~~~~~~~~~~g~~~~~~~r~s~~~~~lgG~~~i~~aF~~Ar~ 170 (348)
T 1w32_A 97 ----SNANFRQDFARHIDTVAAHFAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRARA 170 (348)
T ss_dssp ----TCTTHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHHH
T ss_pred ----CCHHHHHHHHHHHHHHHHHhCC--ceeEEEeecccccCCccccCCcccccccccchHHHhcCchHHHHHHHHHHHH
Confidence 0135888999999999999997 899999999998632 1 0 1233 5788999999999
Q ss_pred cCCCcEEEEcC
Q 046395 321 YSSSAYVILSN 331 (535)
Q Consensus 321 ~~p~~~ii~~~ 331 (535)
.+|+..+++.+
T Consensus 171 adP~a~L~~ND 181 (348)
T 1w32_A 171 ADPTAELYYND 181 (348)
T ss_dssp HCTTSEEEEEE
T ss_pred hCCCCEEEecc
Confidence 99999987743
|
| >4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A | Back alignment and structure |
|---|
Probab=98.81 E-value=1.6e-08 Score=109.05 Aligned_cols=143 Identities=17% Similarity=0.135 Sum_probs=99.4
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe----cCCC--CCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD----LHAL--RVSQNGSPHSG 255 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld----lH~~--pg~~ng~~~sg 255 (535)
++++++.||++|+|+||+.|. |...+|.++. |+-+....|+++|+.|+++||+|||- +++- -|+.-.|....
T Consensus 34 W~d~l~kmKa~G~NtV~~yv~-W~~hEP~~G~-fdF~g~~dL~~fl~~a~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~ 111 (595)
T 4e8d_A 34 WYHSLYNLKALGFNTVETYVA-WNLHEPCEGE-FHFEGDLDLEKFLQIAQDLGLYAIVRPSPFICAEWEFGGLPAWLLTK 111 (595)
T ss_dssp HHHHHHHHHHTTCCEEEEECC-HHHHCSBTTB-CCCSGGGCHHHHHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGS
T ss_pred HHHHHHHHHHcCCCEEEEecc-HHHcCCCCCe-ecccchhhHHHHHHHHHHcCCEEEEecCCceecccCCCcCChhhccC
Confidence 389999999999999999998 5888998876 86665566999999999999999996 2211 11111111100
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhC-----CCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYA-----DHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~-----~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
......-++.+.+...++++.|+++.+ +...|+++++-||..... +. ++|++.+.+..|+.+-..+++.+
T Consensus 112 -p~~lRt~~p~y~~~~~~~~~~l~~~l~~~~~~~GgpVI~~QvENEyG~~~-~~---~~Y~~~l~~~~~~~Gi~vpl~t~ 186 (595)
T 4e8d_A 112 -NMRIRSSDPAYIEAVGRYYDQLLPRLVPRLLDNGGNILMMQVENEYGSYG-ED---KAYLRAIRQLMEECGVTCPLFTS 186 (595)
T ss_dssp -SSCSSSSCHHHHHHHHHHHHHHGGGTGGGBGGGTSCEEEEESSSSGGGTC-CC---HHHHHHHHHHHHHTTCCSCEEEE
T ss_pred -CceeccCCHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEEEccccccccC-Cc---HHHHHHHHHHHHHcCCcEEEEEc
Confidence 000000126788888888777777644 346799999999987532 22 56667777777777777777766
Q ss_pred C
Q 046395 331 N 331 (535)
Q Consensus 331 ~ 331 (535)
+
T Consensus 187 d 187 (595)
T 4e8d_A 187 D 187 (595)
T ss_dssp E
T ss_pred c
Confidence 5
|
| >3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=1.4e-08 Score=114.53 Aligned_cols=149 Identities=18% Similarity=0.188 Sum_probs=105.5
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC------CCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL------RVSQNGSPHSG 255 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~------pg~~ng~~~sg 255 (535)
++++|+.||++|+|+|++.|. |...+|.++. |+-.....|+++|+.|+++||+|||-.--+ -|+.-.|...
T Consensus 58 W~d~l~kmKa~GlNtV~tYV~-Wn~hEP~eG~-fdFsg~~dL~~fl~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~- 134 (1003)
T 3og2_A 58 YLDVFHKIKALGFNTVSFYVD-WALLEGKPGR-FRADGIFSLEPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQR- 134 (1003)
T ss_dssp HHHHHHHHHTTTCCEEEEECC-HHHHCSBTTB-CCCCGGGCSHHHHHHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGG-
T ss_pred HHHHHHHHHHcCCCEEEEecc-hhhcCCCCCE-ecccchhhHHHHHHHHHHcCCEEEecCCcceeeecCCCCccchhcc-
Confidence 389999999999999999998 5888999886 866666679999999999999999953110 0111111110
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCCC-----CcEEEEEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYADH-----PSLVAIELMNEPKAPDLK-LDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~~~-----p~V~~~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
.......-++.+++...+++++|+++++.+ +.|++|++-||....... ...-+.|++.+.+..|+.+-..+++.
T Consensus 135 ~~~~lRt~~p~yl~~~~~~~~~l~~~~~~~~~~~GGpII~~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t 214 (1003)
T 3og2_A 135 VKGKLRTDAPDYLHATDNYVAHIASIIAKAQITNGGPVILYQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLIN 214 (1003)
T ss_dssp CCSCTTSCCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEEEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBC
T ss_pred CCCeecCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEEcccccCcccccccCCCHHHHHHHHHHHHHcCCceEEEE
Confidence 000011112788999999999999998754 589999999998752210 00025788888888899887777666
Q ss_pred cCCC
Q 046395 330 SNRL 333 (535)
Q Consensus 330 ~~~~ 333 (535)
++.+
T Consensus 215 ~d~~ 218 (1003)
T 3og2_A 215 NDAF 218 (1003)
T ss_dssp CBSS
T ss_pred cCCc
Confidence 5543
|
| >1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A | Back alignment and structure |
|---|
Probab=98.77 E-value=2.3e-07 Score=96.17 Aligned_cols=137 Identities=19% Similarity=0.282 Sum_probs=97.2
Q ss_pred HHHHHHHHHcCCCEEEeC-CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEec---CCC-CCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIP-VGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL---HAL-RVSQNGSPHSGSR 257 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~-pg~~ng~~~sg~~ 257 (535)
+++.+.| ..+||.|++- ..-|..++|.+|. | .+..+|++|++|+++||+|.... |.. |. |... ..
T Consensus 42 ~~~~~l~-~~~fn~vt~eNe~kW~~~ep~~G~-~---~f~~~D~~v~~a~~~gi~vrghtlvW~~q~P~----W~~~-~~ 111 (379)
T 1r85_A 42 EKDVQML-KRHFNSIVAENVMKPISIQPEEGK-F---NFEQADRIVKFAKANGMDIRFHTLVWHSQVPQ----WFFL-DK 111 (379)
T ss_dssp HHHHHHH-HHHCSEEEESSTTSHHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEECSCCSTTCCG----GGGB-CT
T ss_pred HHHHHHH-HhhCCeEEECCcccHHHhcCCCCc-c---CchhHHHHHHHHHHCCCEEEEecccccccCch----hhhc-Cc
Confidence 4666667 6699999995 3345778888875 6 67999999999999999998643 321 21 1110 00
Q ss_pred CCCC----------CCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----C-h-HHH-HHHHHHHHHHHH
Q 046395 258 DGFQ----------EWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----K-L-DSL-KTYYKAGYDTVR 319 (535)
Q Consensus 258 ~~~~----------~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~-~-~~~-~~~~~~~~~aIR 319 (535)
.|.. ... +..++...++++.+++||++ .|..|++.|||...+. + . ..+ .+|+..+++++|
T Consensus 112 ~G~~~~~g~~~~~~~~~~~~~~~~~~~~I~~v~~rY~g--~i~~wdV~NE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar 189 (379)
T 1r85_A 112 EGKPMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAAR 189 (379)
T ss_dssp TSSBGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHH
T ss_pred CCccccccccccccCCCHHHHHHHHHHHHHHHHHHhCC--CceEEEeecccccCCCCccCchHHHhhhHHHHHHHHHHHH
Confidence 0110 111 35677888999999999999 8999999999986321 1 0 111 368999999999
Q ss_pred h-cCCCcEEEEcC
Q 046395 320 K-YSSSAYVILSN 331 (535)
Q Consensus 320 ~-~~p~~~ii~~~ 331 (535)
+ .+|+..+++.+
T Consensus 190 ~~adP~a~L~~ND 202 (379)
T 1r85_A 190 KYGGDNIKLYMND 202 (379)
T ss_dssp HHHCTTSEEEEEE
T ss_pred hhCCCCCEEEecc
Confidence 9 99999988843
|
| >3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A | Back alignment and structure |
|---|
Probab=98.71 E-value=2e-07 Score=95.20 Aligned_cols=225 Identities=13% Similarity=0.224 Sum_probs=138.8
Q ss_pred HHHHHHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCCC-CCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHAL-RVSQNGSPHSGS 256 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~~-pg~~ng~~~sg~ 256 (535)
+.....+-...||.+.. .+-| ..++|.+|. | .+...|++|++|+++||.|. |-+|.. |. |..
T Consensus 47 ~~~y~~~~~~~Fn~~t~eN~mKW-~~iep~~G~-~---~f~~~D~~v~~a~~~gi~vrgHtLvWh~q~P~----W~~--- 114 (341)
T 3niy_A 47 EEKYMEVARREFNILTPENQMKW-DTIHPERDR-Y---NFTPAEKHVEFAEENNMIVHGHTLVWHNQLPG----WIT--- 114 (341)
T ss_dssp HHHHHHHHHHHCSEEEESSTTSH-HHHCCBTTE-E---ECHHHHHHHHHHHHTTCEEEEEEEECSSSCCH----HHH---
T ss_pred CHHHHHHHHHhCCEEEECcccch-HHhcCCCCc-c---ChHHHHHHHHHHHHCCCeEEeeeccccccCch----hhh---
Confidence 34444454567999998 6655 677888775 6 57889999999999999995 445632 21 110
Q ss_pred CCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC-----h-HHH-HHHHHHHHHHHHhcCCCcEEE
Q 046395 257 RDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK-----L-DSL-KTYYKAGYDTVRKYSSSAYVI 328 (535)
Q Consensus 257 ~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~-----~-~~~-~~~~~~~~~aIR~~~p~~~ii 328 (535)
...|. ++..+.+.++++.+++||++ .|.+|+++|||...+.. . ..+ .+|+..++++.|+.+|+..++
T Consensus 115 ---~~~~~~~~~~~~~~~~i~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~af~~Ar~~dP~a~L~ 189 (341)
T 3niy_A 115 ---GREWTKEELLNVLEDHIKTVVSHFKG--RVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWTKEADPDAILI 189 (341)
T ss_dssp ---TSCCCHHHHHHHHHHHHHHHHHHTTT--TCCEEEEEECCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEE
T ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHcCC--CccEEEEecccccccccccccchhhhcCHHHHHHHHHHHHHHCCCceEE
Confidence 11344 56788899999999999998 79999999999853211 1 111 368899999999999999988
Q ss_pred EcCCCC---CC--hh-------hhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEE
Q 046395 329 LSNRLG---GE--WS-------ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSF 396 (535)
Q Consensus 329 ~~~~~g---~~--~~-------~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~ 396 (535)
+.+ |+ .. .. .+..-..+-+.+-+..|..... .+. +.+. +.|..+... |.++.
T Consensus 190 ~ND-yn~e~~~~k~~~~~~lv~~l~~~GvpIdgIG~Q~H~~~~~------~~~----~~~~----~~l~~~a~l-Gl~v~ 253 (341)
T 3niy_A 190 YND-YSIEEINAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYRG------LNY----DSFR----RNLERFAKL-GLQIY 253 (341)
T ss_dssp EEE-SSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTC------CCH----HHHH----HHHHHHHHT-TCEEE
T ss_pred eec-cccccCchHHHHHHHHHHHHHHCCCCcceEeeeeecCCCC------CCH----HHHH----HHHHHHHHc-CCeEE
Confidence 853 32 11 11 1112223456777888874321 111 1222 224444433 55699
Q ss_pred EeccCCCcCCCCCCH---HHHHHHHHHHHHHHhh--CCcceEEEeeeeC
Q 046395 397 VGEWSCEWEAEGASK---RDYQRFAEAQLDVYGR--ATFGWAYWAYKFA 440 (535)
Q Consensus 397 vGEfg~~~~~~~~~~---~~~~~~~~~ql~~~~~--~~~Gw~~W~~k~~ 440 (535)
|+|+........... ....++++..+..+-+ ...|-++|.+...
T Consensus 254 iTElDv~~~~~~~~~~~~~~QA~~y~~~~~~~~~~~~v~git~Wg~~D~ 302 (341)
T 3niy_A 254 ITEMDVRIPLSGSEDYYLKKQAEICAKIFDICLDNPAVKAIQFWGFTDK 302 (341)
T ss_dssp EEEEEEEEESSSCHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBTT
T ss_pred EEeccccCCCCCChhHHHHHHHHHHHHHHHHHhcCCCeEEEEEECCccC
Confidence 999976432111101 1112334444444433 3358888887664
|
| >2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.3e-07 Score=110.18 Aligned_cols=124 Identities=19% Similarity=0.247 Sum_probs=90.7
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
.+.||+.||++|+|+||+.- + | .. ++++++|.++||+|+-|+..+.. ...+ ........
T Consensus 376 ~~~dl~~~k~~g~N~iR~~h-~-----~--~~----------~~fydlcDelGilVw~e~~~~~~-w~~~--~~~~~~~~ 434 (1032)
T 2vzs_A 376 AADKLKYVLNLGLNTVRLEG-H-----I--EP----------DEFFDIADDLGVLTMPGWECCDK-WEGQ--VNGEEKGE 434 (1032)
T ss_dssp HHHHHHHHHHTTCCEEEEES-C-----C--CC----------HHHHHHHHHHTCEEEEECCSSSG-GGTT--TSTTSSSC
T ss_pred HHHHHHHHHHcCCCEEECCC-C-----C--Cc----------HHHHHHHHHCCCEEEEccccccc-cccc--CCCCCccc
Confidence 47899999999999999922 1 1 11 34789999999999999854211 0000 00011224
Q ss_pred CCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCC
Q 046395 262 EWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~ 333 (535)
.|.++..+.+.+-++.+.+|+++||+|+.|.+.||+... ..+.+.+.+.+|+.||.+++..+..+
T Consensus 435 ~~~~~~~~~~~~~~~~~V~R~rNHPSIi~Ws~gNE~~~~-------~~~~~~~~~~~k~~DptRpv~~~s~~ 499 (1032)
T 2vzs_A 435 PWVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAASA 499 (1032)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCSSS
T ss_pred ccChhHHHHHHHHHHHHHHHhcCCCeEEEEEeccCCCch-------HHHHHHHHHHHHHhCCCCeEEecCCC
Confidence 566677788888899999999999999999999999742 24566778899999999998765544
|
| >3emz_A Xylanase, endo-1,4-beta-xylanase; (alpha/beta)8 barrel, GH10 enzyme complex, hydrolase; HET: HXH; 2.08A {Bacillus SP} SCOP: c.1.8.3 PDB: 3emq_A* 3emc_A* | Back alignment and structure |
|---|
Probab=98.58 E-value=8.6e-07 Score=90.07 Aligned_cols=226 Identities=15% Similarity=0.153 Sum_probs=136.3
Q ss_pred HHHHHcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---ecCCCCCCCCCCCCCCCCCCCC
Q 046395 187 KFMSQNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV---DLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 187 ~~ik~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIl---dlH~~pg~~ng~~~sg~~~~~~ 261 (535)
..+-...||.+.. .+-| ..++|.+|. | .+...|+++++|+++||.|.. -+|. |.+.+......+ .
T Consensus 30 ~~~~~~~Fn~~t~eN~mKW-~~iep~~G~-~---~f~~~D~~v~~a~~~gi~vrgHtLvWh~----q~P~W~~~~~~g-~ 99 (331)
T 3emz_A 30 GEFIAKHYNSVTAENQMKF-EEVHPREHE-Y---TFEAADEIVDFAVARGIGVRGHTLVWHN----QTPAWMFEDASG-G 99 (331)
T ss_dssp HHHHHHHCSEEEESSTTSH-HHHCSBTTB-C---CCHHHHHHHHHHHTTTCEEEECCSBCSS----SCCGGGGBCTTS-S
T ss_pred HHHHHHhCCEEEECcccch-hhhcCCCCc-c---ChhHHHHHHHHHHHCCCEEeeeeeeccc----cCcHhHhccccC-C
Confidence 4444667999998 6654 778888875 6 578899999999999999865 2242 111111000001 1
Q ss_pred CCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC----hHHH-----HHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 262 EWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK----LDSL-----KTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 262 ~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~----~~~~-----~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
.+. ++..+.+.++++.+++||++ .|.+|++.|||.....+ ...| .+|+..++++.|+.+|+..+++.+
T Consensus 100 ~~~~~~l~~~~~~~I~~v~~rYkg--~i~~WDVvNE~~~~~~~~~~r~s~~~~~lG~~~i~~aF~~Ar~adP~a~L~~ND 177 (331)
T 3emz_A 100 TASREMMLSRLKQHIDTVVGRYKD--QIYAWDVVNEAIEDKTDLIMRDTKWLRLLGEDYLVQAFNMAHEADPNALLFYND 177 (331)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCSSTTCCBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEE
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccCCchhhhcCHHHHHHHHHHHHhhCCCceEEecc
Confidence 233 45678889999999999998 89999999999864211 1111 368899999999999999988853
Q ss_pred CCC-CCh----------hhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEecc
Q 046395 332 RLG-GEW----------SELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW 400 (535)
Q Consensus 332 ~~g-~~~----------~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEf 400 (535)
|+ ... ..+..-..+-+.+-+..|+...+. + .+.++ ..|..+... |.++.|+|+
T Consensus 178 -yn~~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~p------~----~~~~~----~~l~~~a~l-Gl~v~iTEl 241 (331)
T 3emz_A 178 -YNETDPVKREKIYNLVRSLLDQGAPVHGIGMQGHWNIHGP------S----MDEIR----QAIERYASL-DVQLHVTEL 241 (331)
T ss_dssp -SSCSSHHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTBS------C----HHHHH----HHHHHHHTT-SCEEEEEEE
T ss_pred -ccccChHHHHHHHHHHHHHHHCCCccceEEECceecCCCC------C----HHHHH----HHHHHHHHc-CCcEEEeec
Confidence 32 111 111111234577788888643210 1 12222 234444433 556999999
Q ss_pred CCCcCC--------CCCCHH---HHHHHHHHHHHHHhhC---CcceEEEeeeeC
Q 046395 401 SCEWEA--------EGASKR---DYQRFAEAQLDVYGRA---TFGWAYWAYKFA 440 (535)
Q Consensus 401 g~~~~~--------~~~~~~---~~~~~~~~ql~~~~~~---~~Gw~~W~~k~~ 440 (535)
...... ...+.+ ...++++..+.++.+. ..|-++|.+...
T Consensus 242 Di~~~~~~~~~~~~~~~t~~~~~~Qa~~y~~~~~~~~~~~~~v~giT~WG~~D~ 295 (331)
T 3emz_A 242 DLSVFRHEDQRTDLTEPTAEMAELQQKRYEDIFGLFREYRSNITSVTFWGVADN 295 (331)
T ss_dssp EEESSCTTCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTTTEEEEEESSSSTT
T ss_pred ccCCccccccccccCCCCHHHHHHHHHHHHHHHHHHHhcCCCeeEEEEECCCCC
Confidence 654211 111221 1123344444555432 248888887664
|
| >1qw9_A Arabinosidase, alpha-L-arabinofuranosidase; hydrolase; HET: KHP; 1.20A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 1pz2_A* 1qw8_A* 1pz3_A | Back alignment and structure |
|---|
Probab=98.54 E-value=2e-06 Score=92.67 Aligned_cols=159 Identities=15% Similarity=0.203 Sum_probs=101.5
Q ss_pred HHHHHHHHHcCCCEEEeC-------CccccccCCC---CCC---CC--ccchHHHHHHHHHHHHHcCCEEEEecCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIP-------VGWWIAYDPK---PPK---PF--VGGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-------v~~w~~~~p~---~~~---~~--~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~ 247 (535)
++-++.++++|+..||+| ..|.....|. |.. .| .+...-.+|+++++|++.|+.+++.+...++
T Consensus 54 ~d~~~~l~~l~~~~iR~pGG~f~d~y~W~d~igp~~~Rp~~~~~~W~~~~~n~~g~def~~~~~~~g~ep~~~vn~g~~- 132 (502)
T 1qw9_A 54 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGTR- 132 (502)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSSC-
T ss_pred HHHHHHHHhcCCCeEecCCCcccCcccccCCCCChHhCCCcccCCccccccCCCCHHHHHHHHHHcCCeEEEEEeCCCC-
Confidence 566788899999999998 2332222332 111 01 1112224699999999999999998875211
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHH--------HHHHHHhCC-CC-cEEEEEeecCCCCC----CCChHHHHHHHHH
Q 046395 248 QNGSPHSGSRDGFQEWSDSDIQETVAII--------DFLASRYAD-HP-SLVAIELMNEPKAP----DLKLDSLKTYYKA 313 (535)
Q Consensus 248 ~ng~~~sg~~~~~~~W~~~~~~~~~~~~--------~~la~ry~~-~p-~V~~~el~NEP~~~----~~~~~~~~~~~~~ 313 (535)
.++....+++++ ..+-.+|+. .| .|..|||.|||... ..+.+.+.+.+.+
T Consensus 133 ----------------~~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~v~yweiGNE~~g~w~~g~~t~~~Y~~~~~~ 196 (502)
T 1qw9_A 133 ----------------GIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRIACE 196 (502)
T ss_dssp ----------------CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHHHHH
T ss_pred ----------------CHHHHHHHHHHhCCCCCCcHHHHHHHcCCCCCCCCeEEEEeCCCCCCcCCCCcCHHHHHHHHHH
Confidence 023333444433 345556753 34 78899999999853 2367889999999
Q ss_pred HHHHHHhcCCCcEEEEcCCCC------CChh-hhhcccCCCCcEEEEEeecCc
Q 046395 314 GYDTVRKYSSSAYVILSNRLG------GEWS-ELLSFASNLSRVVIDVHFYNL 359 (535)
Q Consensus 314 ~~~aIR~~~p~~~ii~~~~~g------~~~~-~~~~~~~~~~n~v~d~H~Y~~ 359 (535)
.+++||+++|+..|+.++..+ ..|. .++.. ....-..+++|+|..
T Consensus 197 ~a~aik~~dP~i~via~G~~~~~~p~~~~W~~~~l~~-~~~~vD~is~H~Y~~ 248 (502)
T 1qw9_A 197 AAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDH-TYDHVDYISLHQYYG 248 (502)
T ss_dssp HHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHH-HGGGCSEEEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEeCCCcccCcccCchHHHHHHh-cccCCCEEEEeeCCC
Confidence 999999999987766543221 1222 22322 123456899999954
|
| >2c7f_A Alpha-L-arabinofuranosidase; glycosidase, xylan, arabinan, hydrolase; HET: AHR; 2.7A {Clostridium thermocellum} SCOP: b.71.1.2 c.1.8.3 PDB: 2c8n_A | Back alignment and structure |
|---|
Probab=98.53 E-value=2.3e-06 Score=92.31 Aligned_cols=159 Identities=13% Similarity=0.238 Sum_probs=100.8
Q ss_pred HHHHHHHHHcCCCEEEeCCc-------cccccCCC---CCC---CC--ccchHHHHHHHHHHHHHcCCEEEEecCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVG-------WWIAYDPK---PPK---PF--VGGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~-------~w~~~~p~---~~~---~~--~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~ 247 (535)
++-++.|+++|+..||+|=+ |...+.|. |.. .| .+...-.+|+++++|++.|+.+++.+....+
T Consensus 62 ~dl~~~l~~l~~~~iR~PGG~f~d~y~W~d~iGp~~~Rp~~~~~~W~~~~~n~~G~def~~~~~~~G~ep~~~vn~g~~- 140 (513)
T 2c7f_A 62 KDVIELVKELNVPIIRYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMMAVNLGTR- 140 (513)
T ss_dssp HHHHHHHHHHCCSEEEESCSTTGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCTHHHHHHHHHTTCEEEEECCCSSC-
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcceecCCCCChHhCCccccCCccceecCCCCHHHHHHHHHHcCCeEEEEEeCCCC-
Confidence 56788899999999999822 22222221 111 01 1112225699999999999999998864211
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHH--------HHHHHHhCC-CC-cEEEEEeecCCCCC----CCChHHHHHHHHH
Q 046395 248 QNGSPHSGSRDGFQEWSDSDIQETVAII--------DFLASRYAD-HP-SLVAIELMNEPKAP----DLKLDSLKTYYKA 313 (535)
Q Consensus 248 ~ng~~~sg~~~~~~~W~~~~~~~~~~~~--------~~la~ry~~-~p-~V~~~el~NEP~~~----~~~~~~~~~~~~~ 313 (535)
.++....+++++ ..+-.+++. .| .|..|||.|||.+. ..+.+.+.+.+.+
T Consensus 141 ----------------~~~~a~~~vey~n~~~~t~~~~lR~~~G~~ep~~vkyweiGNE~~g~w~~g~~t~~~Y~~~~~~ 204 (513)
T 2c7f_A 141 ----------------GISDACNLLEYCNHPGGSKYSDMRIKHGVKEPHNIKVWCLGNAMDGPWQVGHKTMDEYGRIAEE 204 (513)
T ss_dssp ----------------CHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESCCCCCTTSTTCCCHHHHHHHHHH
T ss_pred ----------------CHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEeccCcccccccCCCCHHHHHHHHHH
Confidence 023333344433 344556654 33 58889999999853 2367889999999
Q ss_pred HHHHHHhcCCCcEEEEcCCCC------CChh-hhhcccCCCCcEEEEEeecCc
Q 046395 314 GYDTVRKYSSSAYVILSNRLG------GEWS-ELLSFASNLSRVVIDVHFYNL 359 (535)
Q Consensus 314 ~~~aIR~~~p~~~ii~~~~~g------~~~~-~~~~~~~~~~n~v~d~H~Y~~ 359 (535)
.+++||+++|+..|+.++.-+ ..|. .++.. ....-..+++|.|..
T Consensus 205 ~a~a~k~~dP~i~via~G~~~~~~~~~~~W~~~~l~~-~~~~vD~is~H~Y~~ 256 (513)
T 2c7f_A 205 TARAMKMIDPSIELVACGSSSKDMPTFPQWEATVLDY-AYDYVDYISLHQYYG 256 (513)
T ss_dssp HHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHH-HTTTCCEEEEEEEEC
T ss_pred HHHHHHHhCCCcEEEEeCCCCCCCcccCchHHHHHHh-cccCCCEEEEeecCC
Confidence 999999999987766543221 1222 23332 234567899999954
|
| >4h4g_A (3R)-hydroxymyristoyl-[acyl-carrier-protein] DEHY; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.65A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.52 E-value=4.4e-08 Score=89.26 Aligned_cols=38 Identities=18% Similarity=0.400 Sum_probs=33.3
Q ss_pred CCcccHHHHHhhCCCCCC------------CCceEEEecCCccCCccccCC
Q 046395 490 PTVMHVNQIRGILPSRVR------------SKREDGIKNLKEFGDDYYRPS 528 (535)
Q Consensus 490 ~~~~~~~~i~~~lphr~p------------~~~~~~~k~v~~~~~~~f~~~ 528 (535)
...+|+++|+++|||||| +++++|+|||| .||+||+|-
T Consensus 10 ~~~~di~~I~~~lPhR~PfLlvDrv~~~~~~~~i~a~k~Vt-~~e~ff~gH 59 (160)
T 4h4g_A 10 KINFDIHKILTLLPHRYPILLVDRVLELEPHKSIKALKNVT-VNEPFFTGH 59 (160)
T ss_dssp ---CCHHHHHHHCCCCTTSCCCCEEEEEETTTEEEEEEECC-TTSGGGGTS
T ss_pred ccccCHHHHHHHCCCCCCeEEEEEEEEecCCCEEEEEEEec-cCcccccCC
Confidence 346899999999999999 78999999999 999999874
|
| >3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} | Back alignment and structure |
|---|
Probab=98.47 E-value=7.7e-07 Score=90.31 Aligned_cols=224 Identities=12% Similarity=0.145 Sum_probs=133.3
Q ss_pred HcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCCC-CCCCCCCCCCCCCCCCCCCC
Q 046395 191 QNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHAL-RVSQNGSPHSGSRDGFQEWS 264 (535)
Q Consensus 191 ~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~~-pg~~ng~~~sg~~~~~~~W~ 264 (535)
..-||.+-. .+- |..++|.+|. | .+...|+++++|+++||.|. |-+|.. |. |... ..|.
T Consensus 36 ~~~Fn~~t~eN~mK-W~~iep~~G~-~---~f~~~D~~v~~a~~~gi~vrGHtLvWh~q~P~----W~~~------~~~~ 100 (327)
T 3u7b_A 36 KNEIGSITPENAMK-WEAIQPNRGQ-F---NWGPADQHAAAATSRGYELRCHTLVWHSQLPS----WVAN------GNWN 100 (327)
T ss_dssp TTTCCEEEESSTTS-HHHHCSBTTB-C---CCHHHHHHHHHHHTTTCEEEEEEEEESTTCCH----HHHT------CCCC
T ss_pred HhhCCeEEECcccc-HHHhcCCCCc-c---ChHHHHHHHHHHHHCCCEEEEeeeecCCcCcH----HHhc------CCCC
Confidence 456777765 333 5678888875 6 57889999999999999986 344531 21 1111 1234
Q ss_pred -hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCCh--HHH-----HHHHHHHHHHHHhcCCCcEEEEcCCCC--
Q 046395 265 -DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKL--DSL-----KTYYKAGYDTVRKYSSSAYVILSNRLG-- 334 (535)
Q Consensus 265 -~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~--~~~-----~~~~~~~~~aIR~~~p~~~ii~~~~~g-- 334 (535)
++..+.+.++++.+++||++ .|.+|++.|||...+... ..| .+|+..++++.|+.+|+..+++.+ |+
T Consensus 101 ~~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~~~~~~~~G~~~i~~af~~Ar~~dP~a~L~~Nd-yn~e 177 (327)
T 3u7b_A 101 NQTLQAVMRDHINAVMGRYRG--KCTHWDVVNEALNEDGTYRDSVFLRVIGEAYIPIAFRMALAADPTTKLYYND-YNLE 177 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEE-SSCT
T ss_pred HHHHHHHHHHHHHHHHHHhCC--CceEEEEeccccCCCCCccccchhhhccHHHHHHHHHHHHhHCCCCeEEecc-cccc
Confidence 46678899999999999998 789999999998632110 111 368899999999999999988853 22
Q ss_pred -CC--h-------hhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCc
Q 046395 335 -GE--W-------SELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEW 404 (535)
Q Consensus 335 -~~--~-------~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~ 404 (535)
.. . ..+.....+-+.+-+..|......+...... ..++.+.. .|..+.. .|.++.|+|+....
T Consensus 178 ~~~~k~~~~~~~v~~l~~~GvpidgiG~Q~H~~~~~~~~~~~~~--p~~~~~~~----~l~~~a~-lGl~v~iTElDv~~ 250 (327)
T 3u7b_A 178 YGNAKTEGAKRIARLVKSYGLRIDGIGLQAHMTSESTPTQNTPT--PSRAKLAS----VLQGLAD-LGVDVAYTELDIRM 250 (327)
T ss_dssp TCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCCSSCCSCC--CCHHHHHH----HHHHHHT-TTCEEEEEEEEEEE
T ss_pred CCchhhHHHHHHHHHHHHCCCCcceEEEcccccccccccccCCC--CCHHHHHH----HHHHHHh-cCCceEEEeccccc
Confidence 11 0 1111222345778888898752111000000 11223332 2444443 35669999997654
Q ss_pred CCCCCCH---HHHHHHHHHHHHHHhh--CCcceEEEeeeeC
Q 046395 405 EAEGASK---RDYQRFAEAQLDVYGR--ATFGWAYWAYKFA 440 (535)
Q Consensus 405 ~~~~~~~---~~~~~~~~~ql~~~~~--~~~Gw~~W~~k~~ 440 (535)
... .+. +...++++..+..+-+ ...|-++|.+...
T Consensus 251 ~~p-~~~~~~~~Qa~~y~~~~~~~~~~~~v~gIt~WG~~D~ 290 (327)
T 3u7b_A 251 NTP-ATQQKLQTNADAYARIVGSCMDVKRCVGITVWGISDK 290 (327)
T ss_dssp ESS-CCHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBGG
T ss_pred CCC-CCHHHHHHHHHHHHHHHHHHHhCCCceEEEEEccCcC
Confidence 211 111 1112233333444433 3458888887663
|
| >2y2w_A Arabinofuranosidase; hydrolase, arabinoxylan, glycoside hydrolase family 51; 2.50A {Bifidobacterium longum} | Back alignment and structure |
|---|
Probab=98.46 E-value=2e-06 Score=93.49 Aligned_cols=159 Identities=15% Similarity=0.295 Sum_probs=100.4
Q ss_pred HHHHHHHHHcCCCEEEeCC-------ccccccCCC---CCC---CC--ccchHHHHHHHHHHHHHcCCEEEEecCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPV-------GWWIAYDPK---PPK---PF--VGGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv-------~~w~~~~p~---~~~---~~--~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~ 247 (535)
.+-++.|+++|+..||+|= .|...+.|. |.. .| .+...-.+|+++++|++.|+.+++.+...++
T Consensus 94 ~Dv~~alk~L~~~~lR~PGG~f~d~Y~W~d~iGP~e~Rp~~~~~~W~~~e~n~fG~dEf~~~~~~~GaeP~i~vn~G~~- 172 (574)
T 2y2w_A 94 QDVLDLVKELGVTCVRYPGGNFVSNYNWEDGIGPRENRPMRRDLAWHCTETNEMGIDDFYRWSQKAGTEIMLAVNMGTR- 172 (574)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEEECCSSC-
T ss_pred HHHHHHHHHhCCCEEeeCCCcccCcceecCCcCChhhCCCccccCccccccCCcCHHHHHHHHHHcCCEEEEEEeCCCC-
Confidence 5677788999999999983 232222332 110 01 1111223799999999999999998874221
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHH--------HHHHHhCC-CC-cEEEEEeecCCCCC----CCChHHHHHHHHH
Q 046395 248 QNGSPHSGSRDGFQEWSDSDIQETVAIID--------FLASRYAD-HP-SLVAIELMNEPKAP----DLKLDSLKTYYKA 313 (535)
Q Consensus 248 ~ng~~~sg~~~~~~~W~~~~~~~~~~~~~--------~la~ry~~-~p-~V~~~el~NEP~~~----~~~~~~~~~~~~~ 313 (535)
..+....+++++. .+-.+++. .| .|..|||.||+.+. ..+.+.+.+.+.+
T Consensus 173 ----------------~~~ea~dwveY~n~~~~t~w~~lR~~~G~~ep~~vkyweIGNE~~g~W~~G~~t~e~Y~~~~~~ 236 (574)
T 2y2w_A 173 ----------------GLKAALDELEYVNGAPGTAWADQRVANGIEEPMDIKMWCIGNEMDGPWQVGHMSPEEYAGAVDK 236 (574)
T ss_dssp ----------------CHHHHHHHHHHHHCCTTSHHHHHHHHTTCCSCCCCCEEEESSCTTSTTSTTCCCHHHHHHHHHH
T ss_pred ----------------CHHHHHHHHHHhCCCCCChHHHHHHHcCCCCCcceeEEEeccccccccccCCCCHHHHHHHHHH
Confidence 0233334444333 34445653 34 68899999999853 2357789999999
Q ss_pred HHHHHHhcCCCcEEEEcCCCC------CChh-hhhcccCCCCcEEEEEeecCc
Q 046395 314 GYDTVRKYSSSAYVILSNRLG------GEWS-ELLSFASNLSRVVIDVHFYNL 359 (535)
Q Consensus 314 ~~~aIR~~~p~~~ii~~~~~g------~~~~-~~~~~~~~~~n~v~d~H~Y~~ 359 (535)
.+++||+++|+..|+.++.-+ .+|. .++.. ....-..++.|+|..
T Consensus 237 ~a~AiK~vdP~i~via~G~~~~~~p~~~~W~~~~l~~-~~~~vD~vs~H~Y~~ 288 (574)
T 2y2w_A 237 VAHAMKLAESGLELVACGSSGAYMPTFGTWEKTVLTK-AYENLDFVSCHAYYF 288 (574)
T ss_dssp HHHHHHHHCTTCEEEEECCSCTTSTTTTHHHHHHHHH-HGGGCCEEEEEEEEC
T ss_pred HHHHHHHhCCCeEEEEecCCcccCccccchHHHHHHh-cccCCCEEEEeecCC
Confidence 999999999987766543221 1232 22222 123456899999954
|
| >4f8x_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA; 1.47A {Penicillium canescens} | Back alignment and structure |
|---|
Probab=98.30 E-value=1.1e-05 Score=81.96 Aligned_cols=217 Identities=11% Similarity=0.119 Sum_probs=132.2
Q ss_pred cCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCC-CCCCCCCCCCCCCCCCCCCCC-
Q 046395 192 NGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHA-LRVSQNGSPHSGSRDGFQEWS- 264 (535)
Q Consensus 192 ~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~-~pg~~ng~~~sg~~~~~~~W~- 264 (535)
..||.+.. .+-| ..++|.+|. | .+...|+++++|+++||.|. |-+|. .|. |... ..|.
T Consensus 39 ~~Fn~~t~eN~mKW-~~~ep~~G~-~---~f~~aD~~v~~a~~~gi~vrGHtLvWh~q~P~----W~~~------~~~~~ 103 (335)
T 4f8x_A 39 QNFGEITPANAMKF-MYTETEQNV-F---NFTEGEQFLEVAERFGSKVRCHNLVWASQVSD----FVTS------KTWTA 103 (335)
T ss_dssp HHCSEEEESSTTSG-GGTEEETTE-E---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCH----HHHT------SCCCH
T ss_pred HhCCEEEECCccch-HHhCCCCCc-c---CcchhHHHHHHHHHCCCEEEEeeecccccCcH----HHhc------CCCCH
Confidence 37899988 6765 677887775 6 57889999999999999985 44553 121 1111 1234
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC-----h-HHH-HHHHHHHHHHHHhc-----CCCcEEEEcCC
Q 046395 265 DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK-----L-DSL-KTYYKAGYDTVRKY-----SSSAYVILSNR 332 (535)
Q Consensus 265 ~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~-----~-~~~-~~~~~~~~~aIR~~-----~p~~~ii~~~~ 332 (535)
++..+.+.++++.+++||++ .|.+|++.|||...+.. . ..+ .+|...++++.|+. +|+..+++-+
T Consensus 104 ~~l~~~~~~~I~~v~~rY~g--~i~~WDVvNE~~~~~g~~r~s~~~~~lG~~~i~~aF~~Ar~a~~~~~dP~a~L~~ND- 180 (335)
T 4f8x_A 104 KELTAVMKNHIFKTVQHFGR--RCYSWDVVNEALNGDGTFSSSVWYDTIGEEYFYLAFKYAQEALAQIGANDVKLYYND- 180 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHGG--GCSEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHHHHTTCTTSEEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHhCC--CceEEEEecCccCCCCccccCchhhhcCHHHHHHHHHHHHHhccccCCCCcEEEEec-
Confidence 56778899999999999998 89999999999863211 1 111 26888999999999 9999988853
Q ss_pred CC---CC--hhh-------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEecc
Q 046395 333 LG---GE--WSE-------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW 400 (535)
Q Consensus 333 ~g---~~--~~~-------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEf 400 (535)
|+ .. ... +..-..+-+.+-+..|...... .+. +.+.. .|..+... |.++.|+|+
T Consensus 181 Yn~e~~~~k~~~~~~lv~~l~~~gvpidgiG~Q~H~~~~~~-----p~~----~~~~~----~l~~~a~l-Gl~v~iTEl 246 (335)
T 4f8x_A 181 YGIENPGTKSTAVLQLVSNLRKRGIRIDGVGLESHFIVGET-----PSL----ADQLA----TKQAYIKA-NLDVAVTEL 246 (335)
T ss_dssp SSCSSSSHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTCC-----CCH----HHHHH----HHHHHHHT-TCEEEEEEE
T ss_pred ccccCCcHhHHHHHHHHHHHHHCCCCcceeeeeeeecCCCC-----CCH----HHHHH----HHHHHHHc-CCeeEEeec
Confidence 22 11 011 1122234577888888764211 111 22222 23334433 556999999
Q ss_pred CCCcCCCCC-CHH---HHHHHHHHHHHHHhh---CCcceEEEeeeeC
Q 046395 401 SCEWEAEGA-SKR---DYQRFAEAQLDVYGR---ATFGWAYWAYKFA 440 (535)
Q Consensus 401 g~~~~~~~~-~~~---~~~~~~~~ql~~~~~---~~~Gw~~W~~k~~ 440 (535)
-........ +.+ ...+.++..+..+-+ ...|-++|.+...
T Consensus 247 Di~~~~~p~~~~~~~~~Qa~~y~~~~~~~~~~~~~v~git~WG~~D~ 293 (335)
T 4f8x_A 247 DVRFSTVPYYTAAAQKQQAEDYYVSVASCMNAGPRCIGVVVWDFDDA 293 (335)
T ss_dssp EEEBSSSCCSSHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESCSBGG
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHHHHHHhCcCCeeEEEEEcCccC
Confidence 654321111 111 111223333333332 3358888987664
|
| >3ug3_A Alpha-L-arabinofuranosidase; TIM barrel, hydrolase; 1.80A {Thermotoga maritima} PDB: 3ug4_A* 3ug5_A* 3s2c_A 4atw_A | Back alignment and structure |
|---|
Probab=98.30 E-value=3.3e-06 Score=90.11 Aligned_cols=156 Identities=15% Similarity=0.233 Sum_probs=99.4
Q ss_pred HHHHHHHHHcCCCEEEeCCc-------cccccCCC---CCCC---C--ccchHHHHHHHHHHHHHcCCEEEEecCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVG-------WWIAYDPK---PPKP---F--VGGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~-------~w~~~~p~---~~~~---~--~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~ 247 (535)
.+-++.||+++...||.|=+ |...+.|. |... | .+..-=-+++++++|++.|..+++.+....
T Consensus 71 ~dv~~alk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~~n~fG~~Ef~~~~e~~gaep~~~vN~G~-- 148 (504)
T 3ug3_A 71 KDVLEAVKRIKVPNLRWPGGNFVSNYHWEDGIGPKDQRPVRFDLAWQQEETNRFGTDEFIEYCREIGAEPYISINMGT-- 148 (504)
T ss_dssp HHHHHHHHHTTCSEEEESCSGGGGGCCGGGGCSSGGGSCCEEETTTTEEECCCSCHHHHHHHHHHHTCEEEEECCCSS--
T ss_pred HHHHHHHHhcCCCeEEeCCCcccCcchhccCcCChHHCCCCcccCcccccCCCCCHHHHHHHHHHhCCeEEEEEECCC--
Confidence 56778899999999999843 33333332 1100 1 111111379999999999999999876421
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHH-----------HHhCC-CC-cEEEEEeecCCCCCC----CChHHHHHH
Q 046395 248 QNGSPHSGSRDGFQEWSDSDIQETVAIIDFLA-----------SRYAD-HP-SLVAIELMNEPKAPD----LKLDSLKTY 310 (535)
Q Consensus 248 ~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la-----------~ry~~-~p-~V~~~el~NEP~~~~----~~~~~~~~~ 310 (535)
+ ..+.+.++++.+. ...+. .| .|..|||.||+.+.. .+.+.+.+.
T Consensus 149 -------g-----------~~~ea~d~veY~n~~~~t~~~~lRa~~G~~~P~~vkyweiGNE~~G~~q~G~~t~e~Y~~~ 210 (504)
T 3ug3_A 149 -------G-----------TLDEALHWLEYCNGKGNTYYAQLRRKYGHPEPYNVKFWGIGNEMYGEWQVGHMTADEYARA 210 (504)
T ss_dssp -------C-----------CHHHHHHHHHHHHCCSSCHHHHHHHHTTCCSCCCCCEEEECSSTTSTTSTTCCCHHHHHHH
T ss_pred -------C-----------CHHHHHHHHHHhcCCCCChHHHHHHHcCCCCCCCccEEEecCcccccccccCCCHHHHHHH
Confidence 0 2334444443332 22221 23 688999999998642 357889999
Q ss_pred HHHHHHHHHhcCCCcEEEEcCCCCCChhh-hhcccCCCCcEEEEEeecCc
Q 046395 311 YKAGYDTVRKYSSSAYVILSNRLGGEWSE-LLSFASNLSRVVIDVHFYNL 359 (535)
Q Consensus 311 ~~~~~~aIR~~~p~~~ii~~~~~g~~~~~-~~~~~~~~~n~v~d~H~Y~~ 359 (535)
+.+.+++||+.+|+-.++.++..+..|.. ++.. ....-..+|.|+|..
T Consensus 211 ~~~~a~Aik~~dP~I~lia~G~~~~~W~~~~l~~-~~~~vD~vs~H~Y~~ 259 (504)
T 3ug3_A 211 AKEYTKWMKVFDPTIKAIAVGCDDPIWNLRVLQE-AGDVIDFISYHFYTG 259 (504)
T ss_dssp HHHHHHHHHHHCTTCEEEECCCSCHHHHHHHHHH-HTTTCSEEEEEEEEC
T ss_pred HHHHHHHHHHhCCCcEEEEECCCCcchhHHHHHh-cccCCCEEEEeeCCC
Confidence 99999999999999776665432112332 2322 234567899999974
|
| >3kzs_A Glycosyl hydrolase family 5; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 2.10A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.8e-05 Score=81.99 Aligned_cols=130 Identities=18% Similarity=0.227 Sum_probs=93.3
Q ss_pred HHHHHHHHHcCCCEEEeCCc----cccccC--CCCCC----CCcc----chHHHHHHHHHHHHHcCCEEEEecCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVG----WWIAYD--PKPPK----PFVG----GSLQALDNAFRWAQKYGMKVIVDLHALRVSQ 248 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~----~w~~~~--p~~~~----~~~~----~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ 248 (535)
+..++..|+.|||+||+-+. -+.... |-++. .++. .+|+.+|++|+.|.++||++-|-+-. |..
T Consensus 55 ~~yL~~R~~qGFNvIq~~vl~~~p~~n~~g~~pf~~~~df~~~n~pn~~~YF~h~d~~I~~a~~~Gi~~~Lv~~W--g~~ 132 (463)
T 3kzs_A 55 EYYLEQCKRRGYNVIQVQTLNNVPSMNIYGQYSMTDGYNFKNINQKGVYGYWDHMDYIIRTAAKKGLYIGMVCIW--GSP 132 (463)
T ss_dssp HHHHHHHHHTTCCEEEEESCSSSSCBCTTSCBSCSSTTCCTTCCCTTCCCHHHHHHHHHHHHHHTTCEEEEESSC--HHH
T ss_pred HHHHHHHHHCCCCEEEEEeecCCCCCCcCCCCCcCCCcccccCCCcCHHHHHHHHHHHHHHHHHCCCeEEEEEEe--CCc
Confidence 67889999999999999773 111111 10111 1222 69999999999999999999885442 100
Q ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEE
Q 046395 249 NGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVI 328 (535)
Q Consensus 249 ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii 328 (535)
...+ .-..+....+++.|++||++.++|+ |.|.||-... .. .....++...|++.+|++++.
T Consensus 133 ---v~~~---------~m~~e~~~~Y~ryl~~Ry~~~~Nii-W~lgGD~~~~-~~----~~~w~~~~~~i~~~dp~~L~T 194 (463)
T 3kzs_A 133 ---VSHG---------EMNVDQAKAYGKFLAERYKDEPNII-WFIGGDIRGD-VK----TAEWEALATSIKAIDKNHLMT 194 (463)
T ss_dssp ---HHTT---------SCCHHHHHHHHHHHHHHHTTCSSEE-EEEESSSCTT-SS----HHHHHHHHHHHHHHCCSSCEE
T ss_pred ---cccC---------CCCHHHHHHHHHHHHHHhccCCCCE-EEeCCCCCCc-cC----HHHHHHHHHHHHhcCCCCcEE
Confidence 0000 0246788999999999999999999 9999998753 22 346667788899999999999
Q ss_pred EcCC
Q 046395 329 LSNR 332 (535)
Q Consensus 329 ~~~~ 332 (535)
+++.
T Consensus 195 ~H~~ 198 (463)
T 3kzs_A 195 FHPR 198 (463)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9864
|
| >4i83_A 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; FABZ, hot DOG fold, thioesterase, lyase; 2.60A {Neisseria meningitidis} | Back alignment and structure |
|---|
Probab=98.22 E-value=6.8e-07 Score=80.65 Aligned_cols=38 Identities=18% Similarity=0.354 Sum_probs=34.7
Q ss_pred CCcccHHHHHhhCCCCCC------------CCceEEEecCCccCCccccCC
Q 046395 490 PTVMHVNQIRGILPSRVR------------SKREDGIKNLKEFGDDYYRPS 528 (535)
Q Consensus 490 ~~~~~~~~i~~~lphr~p------------~~~~~~~k~v~~~~~~~f~~~ 528 (535)
+..+++++|+++|||||| |++++|+|||+ .||+||+|-
T Consensus 7 ~~~~~~~~I~~~lPhr~P~llvDrv~~~~~g~~i~~~~~v~-~~~~ff~gH 56 (152)
T 4i83_A 7 QLPIEAKDIQKLIPHRYPFLQLDRITAFEPMKTLTAIKNVS-INEPQFQGH 56 (152)
T ss_dssp CSSEEHHHHHHHCCCCTTSCCCCEEEEEETTTEEEEEEECC-SSSGGGGTS
T ss_pred eeecCHHHHHHhCCCCCCeEEEEEEEEEcCCCEEEEEEEeC-CCchhccCC
Confidence 346899999999999999 68999999999 999999874
|
| >2vrq_A Alpha-L-arabinofuranosidase; hydrolase, glycosidase; HET: XYP; 2.00A {Thermobacillus xylanilyticus} PDB: 2vrk_A | Back alignment and structure |
|---|
Probab=98.21 E-value=3.4e-06 Score=90.59 Aligned_cols=159 Identities=13% Similarity=0.192 Sum_probs=96.2
Q ss_pred HHHHHHHHHcCCCEEEeCCc-------cccccCCC---CCC---CC---ccchHHHHHHHHHHHHHcCCEEEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVG-------WWIAYDPK---PPK---PF---VGGSLQALDNAFRWAQKYGMKVIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~-------~w~~~~p~---~~~---~~---~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg 246 (535)
.+-++.||++|+-.||.|=+ |...+.|. |.. .| .+..-=-+|+++++|++.|..+++.+....|
T Consensus 54 ~dv~~~lk~l~~~~lR~PGG~~~~~y~W~d~iGP~~~Rp~~~~~~W~~~~e~n~fG~~Ef~~~~~~~gaep~~~vn~g~g 133 (496)
T 2vrq_A 54 NDVLEALKQMKIPVLRWPGGCFADEYHWKDGVGPREKRKRMVNTHWGGVIENNHFGTHEFMMLCELLGCEPYISGNVGSG 133 (496)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGTCCGGGGCSCGGGCCCCEETTTTSEECCCCSCHHHHHHHHHHHTCEEEEEECCSSC
T ss_pred HHHHHHHHhcCCCeEEeCCCccccceeecCCcCChHHCCCccCCCCCcccccCccCHHHHHHHHHHcCCeEEEEEECCCC
Confidence 57778899999999999853 32222332 211 01 0111112489999999999999998874211
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHH--------HHHHHHhCC-CC-cEEEEEeecCCCCC--CCChHHHHHHHHHH
Q 046395 247 SQNGSPHSGSRDGFQEWSDSDIQETVAII--------DFLASRYAD-HP-SLVAIELMNEPKAP--DLKLDSLKTYYKAG 314 (535)
Q Consensus 247 ~~ng~~~sg~~~~~~~W~~~~~~~~~~~~--------~~la~ry~~-~p-~V~~~el~NEP~~~--~~~~~~~~~~~~~~ 314 (535)
. .+....+++|+ ..+-.+++. .| .|..|||.||+... ..+.+.+...+.+.
T Consensus 134 -------------~----~~ea~d~veY~n~~~~t~w~~lRa~~G~~eP~~vkyweiGNE~~g~~g~~~~~~Y~~~~~~~ 196 (496)
T 2vrq_A 134 -------------T----VQEMSEWVEYITFDGESPMANWRRENGREKPWRIKYWGVGNQNWGCGGNMRAEYYADLYRQF 196 (496)
T ss_dssp -------------C----HHHHHHHHHHHHCCSBSHHHHHHHHTTCCSCCCCCEEEECSCTTTTTTCCCHHHHHHHHHHH
T ss_pred -------------c----HHHHHHHHHHhCCCCCChHHHHHHHcCCCCCCCceEEEEcCcccccCCCCCHHHHHHHHHHH
Confidence 0 12233333333 233344543 22 58899999999753 23567888889999
Q ss_pred HHHHHhc-CCCcEEEEcCC--CCCChhh-hhcccCCCCcEEEEEeecCc
Q 046395 315 YDTVRKY-SSSAYVILSNR--LGGEWSE-LLSFASNLSRVVIDVHFYNL 359 (535)
Q Consensus 315 ~~aIR~~-~p~~~ii~~~~--~g~~~~~-~~~~~~~~~n~v~d~H~Y~~ 359 (535)
.+++|++ +|+-.++.++. .+.+|.. ++.. ....-..+|.|+|..
T Consensus 197 a~a~k~~~dp~i~~ia~G~~~~~~~W~~~~l~~-~~~~~D~vs~H~Y~~ 244 (496)
T 2vrq_A 197 QTYLRNYGDNKLHKIACGANTADYHWTEVLMKQ-AAPFMHGLSLHYYTV 244 (496)
T ss_dssp HHTCCCCTTCCCEEEEEEEETTCHHHHHHHHHH-HGGGCSEEEEEEEEC
T ss_pred HHHHHhCCCCCeEEEEeCCCCCCcchHHHHHHh-CCCCCCEEEEeecCC
Confidence 9999999 77655554332 1122332 2322 122356799999964
|
| >4h41_A Putative alpha-L-fucosidase; hydrolase, carbohydrate metabolism, HOST glycans, structural genomics; HET: MSE 1PE PE4 PG4 PG6; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.18 E-value=7.7e-06 Score=82.95 Aligned_cols=135 Identities=21% Similarity=0.258 Sum_probs=93.6
Q ss_pred hHHHHHHHHHcCCCEEEeCC-cc--ccccCCCC---CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPV-GW--WIAYDPKP---PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSG 255 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv-~~--w~~~~p~~---~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg 255 (535)
++++|+.||++|++.|=|-- +. +... |.. ...+.....+.|+.++++|+++||+|.+.|+..+.. | +.
T Consensus 56 W~~~~~~mK~~GikyvIl~~~~~~gf~~~-pS~~~~~~~~~~p~~Dlv~~~l~aa~k~Gmkv~~Gly~S~~~---W-~~- 129 (340)
T 4h41_A 56 WDLDFQHMKRIGIDTVIMIRSGYRKFMTY-PSPYLLKKGCYMPSVDLVDMYLRLAEKYNMKFYFGLYDSGRY---W-DT- 129 (340)
T ss_dssp HHHHHHHHHHTTCCEEEESCSEETTEESS-CCHHHHHTTCCCCSBCHHHHHHHHHHHTTCEEEEECCBCSHH---H-HH-
T ss_pred HHHHHHHHHHcCCCEEEEEEEeeCCeecc-CcccccccCccCCcccHHHHHHHHHHHhCCeEEEecCCChhh---c-CC-
Confidence 38999999999999885421 11 0000 110 000111234779999999999999999988742210 1 10
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhC-CCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYA-DHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~-~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
+ +.....+....+++++.++|+ +||++.||-|-||+... ......+++.+.+.++++.+..+++++.
T Consensus 130 ---~---d~~~e~e~~~~~i~El~~~Yg~~h~af~GWYi~~Ei~~~---~~~~~~~~~~l~~~lk~ls~~lp~~ISp 197 (340)
T 4h41_A 130 ---G---DLSWEIEDNKYVIDEVWKMYGEKYKSFGGWYISGEISRA---TKGAIDAFRAMGKQCKDISNGLPTFISP 197 (340)
T ss_dssp ---S---CGGGGHHHHHHHHHHHHHHTTTTCTTEEEEEECCCCSSC---CTTHHHHHHHHHHHHHHHTTSCCEEECC
T ss_pred ---C---CHHHHHHHHHHHHHHHHHHhhccCCCeeEEEeccccCch---hhhHHHHHHHHHHHHHHhcCCCceEEee
Confidence 1 112346777889999999998 69999999999999752 2344678889999999999998888875
|
| >3vny_A Beta-glucuronidase; TIM barrel, greek-KEY, glycoside hydrolase family 79, hydrol; 1.50A {Acidobacterium capsulatum} PDB: 3vnz_A* 3vo0_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=5e-05 Score=81.33 Aligned_cols=196 Identities=16% Similarity=0.168 Sum_probs=112.0
Q ss_pred HHHHHHHHHcCC-CEEEeCCcc-----cc-ccCCCCCCC---Cc---------cc--hHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGL-NAVRIPVGW-----WI-AYDPKPPKP---FV---------GG--SLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~-N~VRipv~~-----w~-~~~p~~~~~---~~---------~~--~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++-++.+|++|. -.||+.=.+ |. ...|....| .. .. .-..+|+++++|++-|.++|+.+
T Consensus 60 ~~v~~l~k~L~~~~~lR~GG~~~d~~~w~~g~~p~~~rp~~~~~~~~~~~~~~~~~~~~~~~def~~f~~~~G~~~~~~l 139 (488)
T 3vny_A 60 TQLAGFLRTLGRQGVLRIGGNTSEYTFWNRHAKPTAADEHLAAGPDKGHHAAAREVITPEAVNNLSEFLDKTGWKLIYGL 139 (488)
T ss_dssp HHHHHHHHHHCSSCEEEEESGGGGSEEECTTCCGGGSCTTCCCCCCCSSSCCCCEEECHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHHHHHHHhCCCeEEEeCccccceEEEcCCCCCcccCcccccCcchhhccccCceeCHHHHHHHHHHHHHhCCEEEEEE
Confidence 577788899999 999993221 21 111110000 00 01 23459999999999999999988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC--------CCCChHHHHHHHHH
Q 046395 242 HALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA--------PDLKLDSLKTYYKA 313 (535)
Q Consensus 242 H~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~--------~~~~~~~~~~~~~~ 313 (535)
.... ...+.+.+.++.+...-+. -.|..|||.|||.. ...+.+.+.+-+.+
T Consensus 140 N~g~--------------------~~~~~a~~~v~y~~~~~~~-~~l~~welGNEpd~~~~~G~~~~~~t~~~Y~~~~~~ 198 (488)
T 3vny_A 140 NLGK--------------------GTPENAADEAAYVMETIGA-DRLLAFQLGNEPDLFYRNGIRPASYDFAAYAGDWQR 198 (488)
T ss_dssp CTTT--------------------SCHHHHHHHHHHHHHHHCT-TTEEEEEESSCGGGHHHHSSSCTTCCHHHHHHHHHH
T ss_pred eCCC--------------------CCHHHHHHHHHHHhhcccC-CceeEEEecCcccccccCCccCCCCCHHHHHHHHHH
Confidence 7421 1234455555555542122 27999999999962 12356778888888
Q ss_pred HHHHHHhcCCCcEEEEcC-CCCCCh-hhhhcccCCCCcEEEEEeecCcCCCcccCC------ChhhhHHHHHHhhhHHHH
Q 046395 314 GYDTVRKYSSSAYVILSN-RLGGEW-SELLSFASNLSRVVIDVHFYNLFWDNFNKM------SVQQNIDYIYRQRSSDLR 385 (535)
Q Consensus 314 ~~~aIR~~~p~~~ii~~~-~~g~~~-~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~------~~~~~i~~i~~~~~~~l~ 385 (535)
..++||+.+|+..++-.+ .....| ..++.. ....-..++.|+|..-...-... +....++.+. +.++
T Consensus 199 ~a~a~k~~~p~~~l~gp~~~~~~~w~~~~l~~-~~~~vd~vS~H~Y~~g~~~~~~~t~~~ll~~~~~l~~~~----~~~~ 273 (488)
T 3vny_A 199 FFTAIRKRVPNAPFAGPDTAYNTKWLVPFADK-FKHDVKFISSHYYAEGPPTDPSMTIERLMKPNPRLLGET----AGLK 273 (488)
T ss_dssp HHHHHHHHCTTCCEEEEEESSCGGGHHHHHHH-TGGGCSEEEEEEEEECCTTCTTCCHHHHTSCCHHHHHHH----HHHH
T ss_pred HHHHHHhhCCCCeEEeCCCCCCchhhHHHHHh-cCccCCEEEEeeCCCCCCCCCCcCHHHHcCchHHHHHHH----HHHH
Confidence 999999999876643322 111122 233332 23345679999997410000111 1111122211 1222
Q ss_pred HHhhcCCCcEEEeccCCCc
Q 046395 386 NVTTSDGPLSFVGEWSCEW 404 (535)
Q Consensus 386 ~~~~~~~p~v~vGEfg~~~ 404 (535)
.+.+..++|+++||++..+
T Consensus 274 ~~~~~~g~p~~lgEtnsa~ 292 (488)
T 3vny_A 274 QVEADTGLPFRLTETNSCY 292 (488)
T ss_dssp HHHHHHCCCEEEEEEEEES
T ss_pred HHHhcCCCCEEEeccccCC
Confidence 3333446779999998765
|
| >2gll_A FABZ, (3R)-hydroxymyristoyl-acyl carrier protein dehydratase; lyase; 2.20A {Helicobacter pylori} PDB: 2glm_A* 2glp_A* 2glv_A 3dp1_A* 3cf8_A* 3cf9_A* 3d04_A* 3doy_A* 3doz_A* 3dp0_A* 3b7j_A* 3dp2_A* 3dp3_A* 3ed0_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=1.8e-06 Score=79.41 Aligned_cols=42 Identities=21% Similarity=0.408 Sum_probs=35.6
Q ss_pred ecCCCCcccHHHHHhhCCCCCC------------CCceEEEecCCccCCccccCC
Q 046395 486 FPAYPTVMHVNQIRGILPSRVR------------SKREDGIKNLKEFGDDYYRPS 528 (535)
Q Consensus 486 ~~~~~~~~~~~~i~~~lphr~p------------~~~~~~~k~v~~~~~~~f~~~ 528 (535)
-+.....+++++|+++|||||| +++++++|+|| .||+||+|-
T Consensus 17 ~~~~~~~~~~~~I~~~lPhr~P~llvDrv~~~~~g~~~~~~k~Vt-~~e~ff~GH 70 (171)
T 2gll_A 17 HQNLQSQFFIEHILQILPHRYPMLLVDRITELQANQKIVAYKNIT-FNEDVFNGH 70 (171)
T ss_dssp ---CCSCEEHHHHHHHCCCCTTSCCCCEEEEEETTTEEEEEEECC-SCSTHHHHS
T ss_pred CcccccccCHHHHHHhCCCCCCeeeEEEEEEEcCCCEEEEEEEeC-CCCCeecCC
Confidence 3555667999999999999999 78899999999 999999874
|
| >1z6b_A Pffabz, fatty acid synthesis protein; malaria, beta-hydroxyacyl-ACP dehydra fatty acid biosynthesis, SAD phasing, lyase; 2.09A {Plasmodium falciparum} SCOP: d.38.1.6 PDB: 3az8_A* 3az9_A* 3aza_A* 3azb_A* 1zhg_A 2oki_A 2okh_A | Back alignment and structure |
|---|
Probab=97.99 E-value=4e-06 Score=75.56 Aligned_cols=42 Identities=26% Similarity=0.530 Sum_probs=35.7
Q ss_pred cCCCCcccHHHHHhhCCCCCC------------CCceEEEecCCccCCccccCCC
Q 046395 487 PAYPTVMHVNQIRGILPSRVR------------SKREDGIKNLKEFGDDYYRPST 529 (535)
Q Consensus 487 ~~~~~~~~~~~i~~~lphr~p------------~~~~~~~k~v~~~~~~~f~~~~ 529 (535)
|+++..+++++|+++|||||| |+++++.|+|+ .||+||+|--
T Consensus 5 ~~~~~~~~~~~i~~~lPhr~P~llvD~i~~~~~g~~~~~~~~vt-~d~~~f~ghF 58 (154)
T 1z6b_A 5 PNYDTSIDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVS-TNEPFFNGHF 58 (154)
T ss_dssp ---CCCBCHHHHHHHCCCCTTSCCCCEEEEEETTTEEEEEEECC-TTSGGGGTSC
T ss_pred cccccccCHHHHHHhCCCCCCceeEEEEEEEcCCCEEEEEEEeC-CCchhhcCCC
Confidence 556667999999999999999 78899999999 9999998754
|
| >3clw_A Conserved exported protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.98 E-value=0.00071 Score=72.73 Aligned_cols=236 Identities=11% Similarity=0.073 Sum_probs=123.8
Q ss_pred HcCCCEEEeCCccccc-------cCCC---------CCCCCccchHHHHHHHHHHHHHcCCEEEEec-CCCCCCC--CCC
Q 046395 191 QNGLNAVRIPVGWWIA-------YDPK---------PPKPFVGGSLQALDNAFRWAQKYGMKVIVDL-HALRVSQ--NGS 251 (535)
Q Consensus 191 ~~G~N~VRipv~~w~~-------~~p~---------~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldl-H~~pg~~--ng~ 251 (535)
.+|++.+|+||+--.+ .++. +...|+-..-.....+++.|+++|...|+-. -.+|+-. |+.
T Consensus 62 Glgls~~R~~iG~~d~s~~~ys~~~~~~~~~~~f~~~d~~~d~~~d~~~~~~lk~A~~~~~~~i~aspWSpP~wMk~ng~ 141 (507)
T 3clw_A 62 GMALTNWRVNIGAGSYENREAKEVDNSWNRTECFLSPDGKYDFTKQAGQQWFMKAARERGMNNFLFFTNSAPYFMTRSAS 141 (507)
T ss_dssp SCCCSCEEEECCCCTTTTTTSSCCSSSSSCCCCSBCTTSCBCTTSSHHHHHHHHHHHHTTCCCEEEECSSCCGGGSSSSS
T ss_pred CceeEEEEEeccCCCcccccccccCCcccccccccCCCCCcCcccchhHHHHHHHHHHcCCCeEEEeCCCCcHHhccCCC
Confidence 5899999999964211 1110 0011221111124468888888988534433 3445422 111
Q ss_pred CCCCCCCCCC-CCChHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCC--CCC--------CCChHHHHHHHHHHHHHHH
Q 046395 252 PHSGSRDGFQ-EWSDSDIQETVAIIDFLASRYADHP-SLVAIELMNEP--KAP--------DLKLDSLKTYYKAGYDTVR 319 (535)
Q Consensus 252 ~~sg~~~~~~-~W~~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP--~~~--------~~~~~~~~~~~~~~~~aIR 319 (535)
. .+. .+.. ...+++.+.+.+++...++.|+.+. .|-++.+.||| ... ..+.+...+|++.+..+++
T Consensus 142 ~-~~~-~g~~~~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~es~~~t~~~~a~fik~L~p~l~ 219 (507)
T 3clw_A 142 T-VST-DQDCINLQNDKFDDFARFLVKSAQHFREQGFHVNYISPNNEPNGQWHANSFQEGSFATKADLYRMVEELDKAIS 219 (507)
T ss_dssp S-SCC-CSSSCSSCTTCHHHHHHHHHHHHHHHHHTTCCEEEEECCSCTTSCGGGCCSSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred c-cCC-CCccccCChHHHHHHHHHHHHHHHHHHHcCCceeEeeeecCCccccccCCCcCCCCCCHHHHHHHHHHHHHHHH
Confidence 1 110 0110 1124677778888888888887543 57788889999 431 1356788999999999999
Q ss_pred hcCCCcEEEEcC--CC-----------C-CC-hhhhhccc-----CCCCc--EEEEEeecCcCCCcccCCChhhhHHHHH
Q 046395 320 KYSSSAYVILSN--RL-----------G-GE-WSELLSFA-----SNLSR--VVIDVHFYNLFWDNFNKMSVQQNIDYIY 377 (535)
Q Consensus 320 ~~~p~~~ii~~~--~~-----------g-~~-~~~~~~~~-----~~~~n--~v~d~H~Y~~~~~~~~~~~~~~~i~~i~ 377 (535)
+.+.+..|++.. .| . .. ...+.++. .+..+ .++.+|.|.... .. ..+..++
T Consensus 220 ~~g~~~kI~~~d~~~~~~~~d~~n~~~~~~~~~~~~~d~~a~~yv~g~~~~~diia~H~Y~~~~------~~-~~l~~~r 292 (507)
T 3clw_A 220 EAQIDTKILIPEVGDMKYLFEIDSIAKTPDDIIHSMFYKDGQYSVLKFKNLFNCVAAHDYWSAY------PA-TLLVDIR 292 (507)
T ss_dssp HHTCSCEEEEEEESSGGGGSCCCSCTTCCCCHHHHHHSTTSTTCCTTCTTEEEEEEECCTTCSS------SH-HHHHHHH
T ss_pred hcCCCceEEEeccccccccccccccccchhhHHHhhcCcchHhhhhccccccceEEEeeCCCCC------Cc-chhhhHH
Confidence 999877666652 11 1 11 11222211 11112 358999996311 11 1222222
Q ss_pred HhhhHHHHHHhhc--CCCcEEEeccCCC---cC-CCCCCHH----HHHHHHHHHHHHHhh-CCcceEEEeeee
Q 046395 378 RQRSSDLRNVTTS--DGPLSFVGEWSCE---WE-AEGASKR----DYQRFAEAQLDVYGR-ATFGWAYWAYKF 439 (535)
Q Consensus 378 ~~~~~~l~~~~~~--~~p~v~vGEfg~~---~~-~~~~~~~----~~~~~~~~ql~~~~~-~~~Gw~~W~~k~ 439 (535)
.. +..+.+. .+.+++++|.+.. +. ..+.... .-..+.+....-+.. ..-+|++|..-.
T Consensus 293 ~~----~~~~a~~~~~~k~lw~TE~~~~g~~~~~~~~~~~~~~~~~a~~~a~~i~~~l~~~~~~a~~~Wn~~~ 361 (507)
T 3clw_A 293 NR----IHKELSANGHNTKFWASEYCILEKNEEITMPASPERSINLGLYVARIIHNDLTLANASAWQWWTAVS 361 (507)
T ss_dssp HH----HHHHHHTTSSCCEEEECCCCSCCCCTTTCSSSCHHHHHHHHHHHHHHHHHHHHTSCCSEEEEEESEE
T ss_pred HH----HHHHHhhccCCCceEEeeeccCCCCcccccCCCCcccHHHHHHHHHHHHHHHHhCCCcEEEEchhhc
Confidence 21 2222223 3667999999751 11 0111111 112234444444444 456999999876
|
| >1u1z_A (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase; fatty acid biosynthesis, hot DOG fold, lyase; 2.50A {Pseudomonas aeruginosa} SCOP: d.38.1.6 | Back alignment and structure |
|---|
Probab=97.94 E-value=3.8e-06 Score=76.98 Aligned_cols=40 Identities=28% Similarity=0.483 Sum_probs=33.4
Q ss_pred CCCCcccHHHHHhhCCCCCC-------------CCceEEEecCCccCCccccCC
Q 046395 488 AYPTVMHVNQIRGILPSRVR-------------SKREDGIKNLKEFGDDYYRPS 528 (535)
Q Consensus 488 ~~~~~~~~~~i~~~lphr~p-------------~~~~~~~k~v~~~~~~~f~~~ 528 (535)
..+..+++++|+++|||||| |++++++|+|| .|++||+|-
T Consensus 17 ~~~~~~~~~~I~~~lPhr~p~llvDrv~~~~~~g~~i~~~~~vt-~d~~ff~gh 69 (168)
T 1u1z_A 17 RGSHMMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVS-INEPFFNGH 69 (168)
T ss_dssp ----CBCHHHHTTTCCCCTTSCCCCEEEEEETTTTEEEEEEECC-TTSTTGGGS
T ss_pred cccccCCHHHHHHhCCCCCCeEEEEEEEEEecCCCEEEEEEEeC-CCCCeEeCC
Confidence 34456899999999999999 37999999999 999999873
|
| >2y24_A Xylanase; hydrolase, GH5 family, aldotetraouronic acid; HET: XYP GCV PG4 PGE; 1.39A {Erwinia chrysanthemi} PDB: 1nof_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00025 Score=73.46 Aligned_cols=208 Identities=13% Similarity=0.090 Sum_probs=115.1
Q ss_pred cCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHH
Q 046395 192 NGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQET 271 (535)
Q Consensus 192 ~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~ 271 (535)
+|++.+|+||+.- ...|.. -..+++.|.++|++++..--.+|+-... .+...+.....+++.+.+
T Consensus 45 ~g~s~~R~~ig~~-------~~~~~~-----~~~~~k~A~~~~~~i~aspWSpP~wMk~---n~~~~~~g~L~~~~~~~y 109 (383)
T 2y24_A 45 IGLSIMRVRIDPD-------SSKWNI-----QLPSARQAVSLGAKIMATPWSPPAYMKS---NNSLINGGRLLPANYSAY 109 (383)
T ss_dssp CCCCEEEEEECSS-------GGGGGG-----GHHHHHHHHHTTCEEEEEESCCCGGGBT---TSSSBSCCBBCGGGHHHH
T ss_pred ccceEEEEecCCc-------cccccc-----chHHHHHHHhcCCeEEEecCCCcHHHhC---CCCCCCCCcCCHHHHHHH
Confidence 8999999999641 012321 1446778889999888776666653211 011111111225677888
Q ss_pred HHHHHHHHHHhCCCC-cEEEEEeecCCCCCC------CChHHHHHHHHHHHHHHHhcCCCcEEEEcCC--CCCChh-hhh
Q 046395 272 VAIIDFLASRYADHP-SLVAIELMNEPKAPD------LKLDSLKTYYKAGYDTVRKYSSSAYVILSNR--LGGEWS-ELL 341 (535)
Q Consensus 272 ~~~~~~la~ry~~~p-~V~~~el~NEP~~~~------~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~--~g~~~~-~~~ 341 (535)
.+++...++.|+++. .|-++.+.|||.... .+.+..++|++.....++ +..|++++. |..++. .++
T Consensus 110 A~Yl~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~t~~~~~~fik~~~~~~~----~~kI~~~d~~~~d~~~~~~~l 185 (383)
T 2y24_A 110 TSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGSKFG----SLKVIVAESLGFNPALTDPVL 185 (383)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGGGST----TSEEEEEEETTCCGGGTHHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEecccccCCCCCCCCccCcCHHHHHHHHHHhhhhhc----CCEEEeecccccchhcchhhc
Confidence 888888888887643 467889999998631 235667777765433222 234454332 322221 222
Q ss_pred -cccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHH
Q 046395 342 -SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEA 420 (535)
Q Consensus 342 -~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ 420 (535)
++.....-..+.+|.|.... . .. .. + . ..+.+++++|.++..+........-..+.+.
T Consensus 186 ~d~~a~~~v~~i~~H~Y~~~~---~-----~~-~~--------~---~-~~~k~lw~TE~~~~~~~~~~~w~~~~~~a~~ 244 (383)
T 2y24_A 186 KDSDASKYVSIIGGHLYGTTP---K-----PY-PL--------A---Q-NAGKQLWMTEHYVDSKQSANNWTSAIEVGTE 244 (383)
T ss_dssp TCHHHHTTCCEEEEECTTSCC---C-----CC-HH--------H---H-HTTCEEEEEEECSCTTSCTTCHHHHHHHHHH
T ss_pred cCHhHHhhccEEEEecCCCCc---c-----cc-hh--------h---h-cCCCeEEEeccccCCCcccCchhHHHHHHHH
Confidence 21122234578999996421 1 00 00 1 1 1245699999875322111233333455555
Q ss_pred HHHHHhhCCcceEEEeeee
Q 046395 421 QLDVYGRATFGWAYWAYKF 439 (535)
Q Consensus 421 ql~~~~~~~~Gw~~W~~k~ 439 (535)
....+..+--+|.+|....
T Consensus 245 i~~~l~~~~~~~~~W~~~~ 263 (383)
T 2y24_A 245 LNASMVSNYSAYVWWYIRR 263 (383)
T ss_dssp HHHHHHTTCSEEEEEESBS
T ss_pred HHHHHhcCccEEEEeeccC
Confidence 6666665456999999854
|
| >2w5f_A Endo-1,4-beta-xylanase Y; cellulosome, glycosidase, xylan degradation, hydrolase; HET: XYP; 1.90A {Clostridium thermocellum} PDB: 2wze_A* 2wys_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=6e-05 Score=81.71 Aligned_cols=234 Identities=15% Similarity=0.124 Sum_probs=128.0
Q ss_pred HHHHHHcCCCEEEeC--CccccccCCCCCC-----CCccchHHHHHHHHHHHHHcCCEEE---EecCC-CCCCCCCCCCC
Q 046395 186 FKFMSQNGLNAVRIP--VGWWIAYDPKPPK-----PFVGGSLQALDNAFRWAQKYGMKVI---VDLHA-LRVSQNGSPHS 254 (535)
Q Consensus 186 ~~~ik~~G~N~VRip--v~~w~~~~p~~~~-----~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~-~pg~~ng~~~s 254 (535)
...+-...||.|..- +-| ..++|.++. .| .+...|+++++|+++||+|. |-+|. .|. |...
T Consensus 208 ~~~~~~~~Fn~it~eN~mKw-~~~e~~~g~~~~~~~~---~f~~aD~~v~~A~~ngi~vrGHtLvWhsq~P~----W~~~ 279 (540)
T 2w5f_A 208 IKALILREFNSITCENEMKP-DATLVQSGSTNTNIRV---SLNRAASILNFCAQNNIAVRGHTLVWHSQTPQ----WFFK 279 (540)
T ss_dssp HHHHHHHHCSEEEESSTTSH-HHHEEEEEEETTEEEE---CCTTTHHHHHHHHHTTCEEEEEEEECSSSCCG----GGGB
T ss_pred HHHHHHHhCCeecccccccc-cccccCCCCcccccee---chhHHHHHHHHHHHCCCEEEEEEEEcCCCCch----HHhc
Confidence 333334589999873 444 444554442 13 46789999999999999985 45674 222 2111
Q ss_pred CCCCCCCCC-C-hHHHHHHHHHHHHHHHHhCCC-C--cEEEEEeecCCCCCCC---------C-------hHHHH-----
Q 046395 255 GSRDGFQEW-S-DSDIQETVAIIDFLASRYADH-P--SLVAIELMNEPKAPDL---------K-------LDSLK----- 308 (535)
Q Consensus 255 g~~~~~~~W-~-~~~~~~~~~~~~~la~ry~~~-p--~V~~~el~NEP~~~~~---------~-------~~~~~----- 308 (535)
........+ . +...++..++++.++.||+++ | .|.+|++.|||..... . ...|.
T Consensus 280 ~~~~~~g~~~~~~~l~~~l~~~I~~vv~ry~g~y~~~~i~~WDVvNE~~~~~~~~~~~~g~~r~~~~~~~~s~w~~~~G~ 359 (540)
T 2w5f_A 280 DNFQDNGNWVSQSVMDQRLESYIKNMFAEIQRQYPSLNLYAYDVVNAAVSDDANRTRYYGGAREPGYGNGRSPWVQIYGD 359 (540)
T ss_dssp TTSSTTSCBCCHHHHHHHHHHHHHHHHHHHHHHCTTSCEEEEEEEESCSCSCHHHHHHSTTCCCBSSBTTBBHHHHHHSS
T ss_pred cCcccccCcCCHHHHHHHHHHHHHHHHHHhcccCCCCcEEEEEEecCcccCCccccccccccccccccccCCHHHHhhCc
Confidence 100011112 1 345678888999999999874 4 4999999999986430 0 12232
Q ss_pred -HHHHHHHHHHHhcCCC-cEEEEcCCCC-CCh---hhhh---c-cc--CCCCcEEEEEeecCcCCCcccCCChhhhHHHH
Q 046395 309 -TYYKAGYDTVRKYSSS-AYVILSNRLG-GEW---SELL---S-FA--SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYI 376 (535)
Q Consensus 309 -~~~~~~~~aIR~~~p~-~~ii~~~~~g-~~~---~~~~---~-~~--~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i 376 (535)
+|++.++++.|+.+|+ ..+++.+ |+ ... ..+. . +. ..-+.+-+..|+-.... .+ ..+..+
T Consensus 360 ~~~i~~aF~~Ar~~dP~~a~L~~ND-yn~~~~~k~~~~~~lv~~l~~~gvIdgiG~Q~H~~~~~~-~~------~~~~~~ 431 (540)
T 2w5f_A 360 NKFIEKAFTYARKYAPANCKLYYND-YNEYWDHKRDCIASICANLYNKGLLDGVGMQSHINADMN-GF------SGIQNY 431 (540)
T ss_dssp TTHHHHHHHHHHHHSCTTCEEEEEE-SSTTSHHHHHHHHHHHHHHHHTTCCCEEEECCEEESCSS-ST------TCHHHH
T ss_pred HHHHHHHHHHHHHhCCccceEEEEe-cccccccHHHHHHHHHHHHHhCCcccEEEEeeEecCCCC-CC------CCHHHH
Confidence 6899999999999997 6666643 32 111 1111 1 10 11344555578653210 01 112222
Q ss_pred HHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCH----HHHHHHHHHHHHHHh----hCCcceEEEeeeeC
Q 046395 377 YRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASK----RDYQRFAEAQLDVYG----RATFGWAYWAYKFA 440 (535)
Q Consensus 377 ~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~----~~~~~~~~~ql~~~~----~~~~Gw~~W~~k~~ 440 (535)
+. .|..+... +.|+.|+|+.........+. +.|+++++..+++.. ....|-++|.+...
T Consensus 432 ~~----~l~~~a~~-Gl~i~iTElDi~~~~~~~~~~~QA~~y~~~~~~~~~~~~~~~~~~v~git~WG~~D~ 498 (540)
T 2w5f_A 432 KA----ALQKYINI-GCDVQITELDISTENGKFSLQQQADKYKAVFQAAVDINRTSSKGKVTAVCVWGPNDA 498 (540)
T ss_dssp HH----HHHHHHTT-TSEEEEEEEEEECTTTTSCHHHHHHHHHHHHHHHHHHHHHCCSSCEEEEEESSSSTT
T ss_pred HH----HHHHHHhc-CCcEEEEeeeecCCCCCchHHHHHHHHHHHHHHHHhhhccccCCceeEEEEEcCCCC
Confidence 22 23334433 55699999976532111112 234444444333221 12247788987664
|
| >3gyc_A Putative glycoside hydrolase; YP_001304622.1, structural GEN joint center for structural genomics, JCSG; HET: MSE; 1.85A {Parabacteroides distasonis atcc 8503} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00081 Score=65.79 Aligned_cols=167 Identities=13% Similarity=0.109 Sum_probs=100.8
Q ss_pred HHHHHHHHHcCCCEEEeCC-cc---------ccccCC-------CCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPV-GW---------WIAYDP-------KPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALR 245 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv-~~---------w~~~~p-------~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~p 245 (535)
+.-|+.+.+.|+|+|||-- .+ |.+... .++. +.-..-..|.++++.|++||++||+.-- +-
T Consensus 40 D~afdEavERGYNTVRIcAmP~LLf~~p~~l~~l~pl~gQrrW~~pg~-~evdgr~~L~elf~aAk~hd~~ViLSSW-YQ 117 (393)
T 3gyc_A 40 DQVLDELSERGYNAIRIDAYPHLIAENPMKKWLLKEVWNQQDWGSPDM-NEVQVQPNLNLFLSKCKERDIKVGLSSW-YR 117 (393)
T ss_dssp HHHHHHHHHTTCCEEEEECCHHHHHHCTTCCEEECCSCSSSSSSCSSC-EEECCTTHHHHHHHHHHHTTCEEEEECC-CC
T ss_pred HHHHHHHHHcCCCeEEeccccceeecCCcchhhccccccccccCCCCC-ceechHHHHHHHHHHHHHcCCEEEEehh-hh
Confidence 7889999999999999921 11 111110 0111 1123578899999999999999999544 21
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC----------------CChHHHHH
Q 046395 246 VSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD----------------LKLDSLKT 309 (535)
Q Consensus 246 g~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~----------------~~~~~~~~ 309 (535)
- .. +..+.. ..-.....+...+.++.|.++ +=..+|...||.||-.... ...+.++.
T Consensus 118 Q--sp---seal~a-~~R~e~lA~aw~~lLdfi~~~-GL~drIAyVELhNEv~~~~la~~~~~~~~~vg~~a~~~e~l~~ 190 (393)
T 3gyc_A 118 L--DV---DEVCLK-LDTPEKLADCWLTILRSIEED-GLLDTILYVDLCNEWPGDSWAPFFAKTYPNVGWGNWYKEESLR 190 (393)
T ss_dssp C--BT---TCGGGG-CCSHHHHHHHHHHHHHHHHHT-TCGGGEEEEESSTTTTCTTTCHHHHTTCTTTCTTCTTSHHHHH
T ss_pred c--CH---HHHHhh-hccHHHHHHHHHHHHHHHHHc-cchhceeeEeeeccccCcccccccCccccccccchhhhHhhhH
Confidence 0 00 000000 000012233344455555543 2233899999999965421 12358999
Q ss_pred HHHHHHHHHHhcCCCcEEEEcCCCCCChhhhhcccCCCCcEEEEEeecCcC
Q 046395 310 YYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLF 360 (535)
Q Consensus 310 ~~~~~~~aIR~~~p~~~ii~~~~~g~~~~~~~~~~~~~~n~v~d~H~Y~~~ 360 (535)
|+++.++.+|+.-|+.+|..+-+- .+...+... +.+--..+++|.+-.+
T Consensus 191 ~lee~v~~lR~~hP~lpvt~SyT~-~~~~~~~~~-d~sfldfle~h~wm~~ 239 (393)
T 3gyc_A 191 WMKTSLEKMRQVYPDMPFLYSFDH-GDVKKYEEV-DCSFLDLYEHHIWMAQ 239 (393)
T ss_dssp HHHHHHHHHHTTCTTSCEECCBCC-SCTTHHHHS-CCTTCSSEEBCCCGGG
T ss_pred HHHHHHHHHHHhCCCCeeeeeecc-chhhhhhcc-CchHHhhhhhHHHhhc
Confidence 999999999999999998765433 344455443 3344556788877544
|
| >2wnw_A Activated by transcription factor SSRB; hydrolase, salmonella typhimurium, O-glycosyl hydrolase family 30; 2.00A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00099 Score=70.42 Aligned_cols=226 Identities=12% Similarity=0.146 Sum_probs=123.5
Q ss_pred HcCCCEEEeCCcc-------ccccCCCCC----CCCc-cchHHHHHHHHHHHHHc--CCEEEEecCCCCCCCC--CCCCC
Q 046395 191 QNGLNAVRIPVGW-------WIAYDPKPP----KPFV-GGSLQALDNAFRWAQKY--GMKVIVDLHALRVSQN--GSPHS 254 (535)
Q Consensus 191 ~~G~N~VRipv~~-------w~~~~p~~~----~~~~-~~~l~~ld~~i~~a~~~--Gi~VIldlH~~pg~~n--g~~~s 254 (535)
-+|++.+|+||+- +...+ .++ ..|+ ......+-.+++.|+++ +|+++..--..|+-.. +....
T Consensus 80 Glglsi~R~~IG~~d~s~~~ysy~d-~~~d~~l~~f~~~~d~~~~~~~lk~A~~~~~~l~i~aspWSpP~wMk~n~~~~~ 158 (447)
T 2wnw_A 80 EHNYTLARMPIQSCDFSLGNYAYVD-SSADLQQGRLSFSRDEAHLIPLISGALRLNPHMKLMASPWSPPAFMKTNNDMNG 158 (447)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCC-SHHHHHTTCCCCHHHHHHTHHHHHHHHHHCTTCEEEEEESCCCGGGBTTSCSBS
T ss_pred CCceEEEEEeecCCCCCCCcccccC-CCCCCccccCCcccchhHHHHHHHHHHHhCCCcEEEEecCCCcHHhccCCCcCC
Confidence 4899999999973 11111 000 1132 12333455678888884 6888877777775321 11111
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC------CCChHHHHHHHH-HHHHHHHhcCC-Cc
Q 046395 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP------DLKLDSLKTYYK-AGYDTVRKYSS-SA 325 (535)
Q Consensus 255 g~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~------~~~~~~~~~~~~-~~~~aIR~~~p-~~ 325 (535)
| + .-.+++.+.+.+++...++.|+++. .|-++.+.|||... ..+.+..++|++ .+..++++.+. +.
T Consensus 159 g---g--~L~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~t~~~~~~fik~~L~p~l~~~gl~~~ 233 (447)
T 2wnw_A 159 G---G--KLRRECYADWADIIINYLLEYRRHGINVQALSVQNEPVAVKTWDSCLYSVEEETAFAVQYLRPRLARQGMDEM 233 (447)
T ss_dssp C---C--BBCGGGHHHHHHHHHHHHHHHHHTTCCCCEEESCSSTTCCCSSBCCBCCHHHHHHHHHHTHHHHHHHTTCTTC
T ss_pred C---C--cCCHHHHHHHHHHHHHHHHHHHHcCCCeeEEeeeccCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 1 1 1115677777777777777776543 47778899999963 135678889998 66788888876 44
Q ss_pred EEEEcC-CCC--CCh-hhhhccc-CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEecc
Q 046395 326 YVILSN-RLG--GEW-SELLSFA-SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW 400 (535)
Q Consensus 326 ~ii~~~-~~g--~~~-~~~~~~~-~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEf 400 (535)
.|+..+ .+. .++ ..++..+ ....-..+.+|.|... ....+..+. .+..+.+++++|.
T Consensus 234 kI~~~D~n~~~~~~~~~~il~d~~a~~~v~~ia~H~Y~g~--------~~~~l~~~~----------~~~p~k~lw~TE~ 295 (447)
T 2wnw_A 234 EIYIWDHDKDGLVDWAELAFADEANYKGINGLAFHWYTGD--------HFSQIQYLA----------QCLPDKKLLFSEG 295 (447)
T ss_dssp EEEEEEEEGGGHHHHHHHHTTSHHHHHHCCEEEEECTTCC--------CHHHHHHHH----------HHCTTSEEEEEEC
T ss_pred eEEEeCCCccchhhHHHHHhcCHhHHhhCCEEEEEccCCC--------cHHHHHHHH----------HHCCCCeEEEecc
Confidence 455433 221 001 1122110 1112347999999531 101111111 1122456999999
Q ss_pred CCC-cCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 401 SCE-WEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 401 g~~-~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
+.. |..++.....+..+....+..+....-+|.+|.+-.+
T Consensus 296 ~~~~~~~~~~~~g~w~~~a~~ii~~~~~~~~~~~~Wnl~ld 336 (447)
T 2wnw_A 296 CVPMESDAGSQIRHWHTYLHDMIGNFKSGCSGFIDWNLLLN 336 (447)
T ss_dssp CCBCCCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEESEEE
T ss_pred ccCCcccCCCCCCcHHHHHHHHHHHHhcCCEEEEEhhhhhC
Confidence 743 2211111123344555555555556679999997643
|
| >3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.0026 Score=63.88 Aligned_cols=106 Identities=11% Similarity=0.083 Sum_probs=78.3
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-+++||+.|++.||| |+.+ ..++.+|+..||+|+|.+..-. . ...
T Consensus 18 ~~Vv~llks~gi~~VRl---------------Y~~D-----~~vL~Al~~sgi~V~lGV~n~~------l------~~l- 64 (323)
T 3ur8_A 18 QDVIKLYNANNIKKMRI---------------YYPH-----TNVFNALKGSNIEIILDVPNQD------L------EAL- 64 (323)
T ss_dssp HHHHHHHHHTTCCEEEE---------------SSCC-----HHHHHHHTTCCCEEEEEECGGG------T------GGG-
T ss_pred HHHHHHHHhCCCCeEEe---------------cCCC-----HHHHHHHHhcCCeEEEeccccc------h------hhh-
Confidence 56777889999999999 3222 4688999999999999887410 0 000
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC---ChHHHHHHHHHHHHHHHhcCCC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL---KLDSLKTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~---~~~~~~~~~~~~~~aIR~~~p~ 324 (535)
.. .+.+.++++.-.+.|.....|.++-+-||...... ....+..+++.+.+++++.+-.
T Consensus 65 --a~-~~~A~~WV~~nV~~y~~~~~I~~IaVGNEvl~~~~~~~~~~~Lvpam~nv~~aL~~aGl~ 126 (323)
T 3ur8_A 65 --AN-PSNANGWVQDNIRNHFPDVKFKYIAVGNEVDPGRESGKYARFVGPAMENIYNALSSAGLQ 126 (323)
T ss_dssp --GS-HHHHHHHHHHHTGGGTTTSEEEEEEEEESCCTTSGGGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred --hh-HHHHHHHHHHHHhhhCCCceEEEEEEccccccCCCcccCHHHHHHHHHHHHHHHHHCCCC
Confidence 12 45556666766677876778999999999986432 2678999999999999998754
|
| >1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00046 Score=69.02 Aligned_cols=110 Identities=13% Similarity=0.155 Sum_probs=76.1
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-+++||+.|++.||| |+.+ ..++++++..||+|+|.+....- ...
T Consensus 16 ~~vv~llk~~~i~~vRl---------------Y~~d-----~~vL~A~~~tgi~v~lgv~n~~~------------~~~- 62 (306)
T 1ghs_A 16 SDVVQLYRSKGINGMRI---------------YFAD-----GQALSALRNSGIGLILDIGNDQL------------ANI- 62 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---------------SSCC-----HHHHHHTTTSCCEEEEECCGGGH------------HHH-
T ss_pred HHHHHHHHhcCCCEEEE---------------cCCC-----HHHHHHHHhcCCEEEEeccccch------------hhh-
Confidence 56677889999999999 2222 35788889999999998764100 000
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC-cEEEE
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSS-AYVIL 329 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~ii~ 329 (535)
....+.+.++++.-.+.|.....|.++-+-||+.. + ....+..+++.+.+++++.+-. ..|..
T Consensus 63 --a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~-~-~~~~L~~am~~v~~aL~~~gl~~ikVst 126 (306)
T 1ghs_A 63 --AASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQG-G-ATQSILPAMRNLNAALSAAGLGAIKVST 126 (306)
T ss_dssp --HHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCG-G-GGGGHHHHHHHHHHHHHHHTCTTSEEEE
T ss_pred --hhCHHHHHHHHHHHHhhhCCCceEEEEEEeccccC-C-CHHHHHHHHHHHHHHHHHCCCCceeEEe
Confidence 01233444555555556755568999999999986 3 5678999999999999987654 34443
|
| >3ro8_A Endo-1,4-beta-xylanase; glycosyl hydrolase family 10, GH10, (beta/alpha)8 fold, XYLA hydrolase; 1.34A {Paenibacillus SP} PDB: 3rdk_A 4e4p_A | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0004 Score=70.62 Aligned_cols=221 Identities=12% Similarity=0.129 Sum_probs=124.9
Q ss_pred HcCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCCC-CCCCCCCCCCCCCCCCC---
Q 046395 191 QNGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHAL-RVSQNGSPHSGSRDGFQ--- 261 (535)
Q Consensus 191 ~~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~~-pg~~ng~~~sg~~~~~~--- 261 (535)
..-||.|-. .+-| ..++|.+|. | .+...|+++++|+++||.|- |-+|.. |. |... ..++..
T Consensus 35 ~~~Fn~it~EN~mKw-~~~ep~~G~-~---~f~~aD~~v~~a~~ngi~vrGHtLvWh~q~P~----W~~~-~~d~~g~~~ 104 (341)
T 3ro8_A 35 KMHHDVVTAGNAMKP-DALQPTKGN-F---TFTAADAMIDKVLAEGMKMHGHVLVWHQQSPA----WLNT-KKDDNNNTV 104 (341)
T ss_dssp HHHCSEEEESSTTSH-HHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCG----GGTE-EECTTSCEE
T ss_pred HHhCCEEEECcccch-hHhcCCCCc-c---chHHHHHHHHHHHhCCCEEEeccccCcccCCH----HHhc-cCccccccC
Confidence 345888876 5544 567787765 6 67899999999999999985 556642 22 1111 001111
Q ss_pred CCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----------ChHHH-----HHHHHHHHHHHHhc----
Q 046395 262 EWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----------KLDSL-----KTYYKAGYDTVRKY---- 321 (535)
Q Consensus 262 ~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----------~~~~~-----~~~~~~~~~aIR~~---- 321 (535)
.+. ++..+...++++.+++||++ .|.+|++.|||...+. ....| .+|+..+.++.|+.
T Consensus 105 ~~s~~~l~~~~~~hI~~vv~rYkg--~i~~WDVvNE~~~~~~~~p~~~~~~~r~s~w~~~lG~d~i~~AF~~Ar~a~~~~ 182 (341)
T 3ro8_A 105 PLGRDEALDNLRTHIQTVMKHFGN--KVISWDVVNEAMNDNPSNPADYKASLRQTPWYQAIGSDYVEQAFLAAREVLDEN 182 (341)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHGG--GSSEEEEEECCBCSSCSCTTCTGGGBCCCHHHHHHCTTHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCC--cceEEEEecccccCCCCccccccccccCChHHHhcCHHHHHHHHHHHHHhcccC
Confidence 133 35677888999999999998 7889999999985321 00112 25788889999998
Q ss_pred -CCCcEEEEcCCCC-CCh----------hhhhcc-------cCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhH
Q 046395 322 -SSSAYVILSNRLG-GEW----------SELLSF-------ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSS 382 (535)
Q Consensus 322 -~p~~~ii~~~~~g-~~~----------~~~~~~-------~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~ 382 (535)
+|+..+++- .|+ ... ..+... ...-+.+-+..|+-... +. +.++ .
T Consensus 183 pdp~akL~~N-DYn~~~~~k~~~~~~lv~~l~~~~a~~~~~g~~IdGIG~Q~H~~~~~-------~~----~~~~----~ 246 (341)
T 3ro8_A 183 PSWNIKLYYN-DYNEDNQNKATAIYNMVKDINDRYAAAHNGKLLIDGVGMQGHYNINT-------NP----DNVK----L 246 (341)
T ss_dssp TTCCCEEEEE-ESCTTSHHHHHHHHHHHHHHHHHHHHHTTTCCSCCEEEECCEEETTC-------CH----HHHH----H
T ss_pred CCCCcEEEEe-cCCCcccchHHHHHHHHHHHHHhhhcccCCCCccceeeechhccCCC-------CH----HHHH----H
Confidence 667777773 333 111 111110 12356777888865321 11 2222 2
Q ss_pred HHHHHhhcCCCcEEEeccCCCcCCCCCC-HHH---HHHHHHHHHHHHhhC---CcceEEEeeeeC
Q 046395 383 DLRNVTTSDGPLSFVGEWSCEWEAEGAS-KRD---YQRFAEAQLDVYGRA---TFGWAYWAYKFA 440 (535)
Q Consensus 383 ~l~~~~~~~~p~v~vGEfg~~~~~~~~~-~~~---~~~~~~~ql~~~~~~---~~Gw~~W~~k~~ 440 (535)
.|..+... |.++.|+|+-......... .+. ....++..++++.+. ..|-++|.+...
T Consensus 247 ~l~~~a~l-Gl~v~iTElDi~~~~~~~~~~~~~~~qa~~y~~~~~~~~~~~~~v~giT~WG~~D~ 310 (341)
T 3ro8_A 247 SLEKFISL-GVEVSVSELDVTAGNNYTLPENLAVGQAYLYAQLFKLYKEHADHIARVTFWGMDDN 310 (341)
T ss_dssp HHHHHHTT-TCEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHHHHTGGGEEEEEEC-----
T ss_pred HHHHHHHc-CCceEEEeeeccCCCCCCCCHHHHHHHHHHHHHHHHHHHhccCCceEEEEeCCCCC
Confidence 34444433 5669999995432211111 111 112233344445432 348889988664
|
| >2nt0_A Glucosylceramidase; cerezyme, glucocerebrosidase, glucosylceramide, hydrolysis, disease, hydrolase; HET: NAG; 1.79A {Homo sapiens} SCOP: b.71.1.2 c.1.8.3 PDB: 1y7v_A* 2f61_A* 2j25_A* 2nsx_A* 1ogs_A* 2nt1_A* 3gxd_A* 3gxf_A* 3gxi_A* 3gxm_A* 3rik_A* 3ril_A* 2v3f_A* 2v3e_A* 2v3d_A* 2vt0_A* 2wcg_A* 2xwd_A* 2xwe_A* 2wkl_A* ... | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0035 Score=67.07 Aligned_cols=232 Identities=17% Similarity=0.213 Sum_probs=124.9
Q ss_pred HcCCCEEEeCCcc-------ccccCCCCC----CCCccch--HHHHHHHHHHHHHc---CCEEEEecCCCCCCC--CCCC
Q 046395 191 QNGLNAVRIPVGW-------WIAYDPKPP----KPFVGGS--LQALDNAFRWAQKY---GMKVIVDLHALRVSQ--NGSP 252 (535)
Q Consensus 191 ~~G~N~VRipv~~-------w~~~~p~~~----~~~~~~~--l~~ld~~i~~a~~~---Gi~VIldlH~~pg~~--ng~~ 252 (535)
-+|++.+|+||+- +...+. ++ ..|+-+. ...+-.+|+.|.++ +|+++..--.+|+-. |+..
T Consensus 113 Glglsi~R~~IG~~d~s~~~ysy~d~-~~D~~l~~f~~~~d~~~~~i~~lk~A~~~~~~~lki~aspWSpP~wMk~n~~~ 191 (497)
T 2nt0_A 113 GIGYNIIRVPMASCDFSIRTYTYADT-PDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAV 191 (497)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCS-TTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCSS
T ss_pred CCceEEEEEeecCCCCCCCCccccCC-CCCcccCCCCcCccchhhHHHHHHHHHhhCCCCcEEEEecCCCcHHHhcCCCc
Confidence 4899999999973 111111 11 1232211 12445677777776 688888777777532 1111
Q ss_pred C-CCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC----------CCChHHHHHHHH-HHHHHHH
Q 046395 253 H-SGSRDGFQEWSDSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP----------DLKLDSLKTYYK-AGYDTVR 319 (535)
Q Consensus 253 ~-sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~----------~~~~~~~~~~~~-~~~~aIR 319 (535)
. .|...... .+.+.+.+.+++...++.|+++. .|-++.+.|||... ..+.+..++|++ .+..+++
T Consensus 192 ~ggG~L~~~~--~~~~y~~yA~Ylvk~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~~~s~~~t~~~~~~fik~~L~p~L~ 269 (497)
T 2nt0_A 192 NGKGSLKGQP--GDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLA 269 (497)
T ss_dssp SSSCBBSSCT--TSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHH
T ss_pred CCCCccCCcc--chhHHHHHHHHHHHHHHHHHHcCCCeeEEeeccCCCcccCCCCCCCCCCcCHHHHHHHHHHHHHHHHH
Confidence 1 11111100 02377777777777777776543 47788999999752 134577888988 5677888
Q ss_pred hcCC-CcEEEEcC-CC-C-CCh-hhhh-cccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCC
Q 046395 320 KYSS-SAYVILSN-RL-G-GEW-SELL-SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGP 393 (535)
Q Consensus 320 ~~~p-~~~ii~~~-~~-g-~~~-~~~~-~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p 393 (535)
+.+- +..|++.+ .+ . .++ ..++ ++.....-..+.+|.|..... .....+..+. .+..+.
T Consensus 270 ~~gl~~~kI~~~D~n~~~~~~~~~~~l~d~~a~~~v~~ia~H~Y~~~~~-----~~~~~l~~~~----------~~~p~k 334 (497)
T 2nt0_A 270 NSTHHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLA-----PAKATLGETH----------RLFPNT 334 (497)
T ss_dssp TSTTTTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTCCEEEEEEETTSCC-----CHHHHHHHHH----------HHCTTS
T ss_pred hcCCCCceEEEecCCCCcchhHHHHHhcChhhHhhcceEEEEecCCCCC-----ChHHHHHHHH----------HHCCCC
Confidence 8764 55555543 21 1 111 1122 111122345899999954210 1111122111 112245
Q ss_pred cEEEeccCCC---cC--CCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 394 LSFVGEWSCE---WE--AEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 394 ~v~vGEfg~~---~~--~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
+++++|.+.. +. ........-..+.+..+..+....-+|.+|.+-.+
T Consensus 335 ~lw~TE~~~~~~~~~~~~~~~~w~~a~~~a~~ii~~l~~~~~~~~~Wnl~ld 386 (497)
T 2nt0_A 335 MLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALN 386 (497)
T ss_dssp EEEEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESEEC
T ss_pred cEEEecccCCCCCccCCCCcCcHHHHHHHHHHHHHHHhhcceeeEeeeeeec
Confidence 6999998643 11 11123333345555666666655569999998654
|
| >2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.004 Score=62.45 Aligned_cols=107 Identities=14% Similarity=0.095 Sum_probs=74.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-+++||+.|++.||| |..+ ..++++++..||+|+|.+....- ...
T Consensus 16 ~~vv~llk~~~i~~vRl---------------Y~~d-----~~vl~A~~~tgi~v~lgv~n~~~------------~~~- 62 (312)
T 2cyg_A 16 SEVVSLYKSNNIARMRL---------------YDPN-----QAALQALRNSNIQVLLDVPRSDV------------QSL- 62 (312)
T ss_dssp HHHHHHHHHTTCCEEEE---------------SSCC-----HHHHHHHTTSCCEEEEEECHHHH------------HHH-
T ss_pred HHHHHHHHhcCCCEEEE---------------cCCC-----HHHHHHHHhcCCEEEEeccccch------------hhh-
Confidence 45578889999999999 2221 35788899999999998763100 000
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 324 (535)
....+.+.++++.-...|.....|.++-+-||+.........+..+++.+.+++++.+-.
T Consensus 63 --a~~~~~a~~Wv~~nv~~y~~~~~i~~I~VGNEvl~~~~~~~~L~~am~~v~~aL~~~gl~ 122 (312)
T 2cyg_A 63 --ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQ 122 (312)
T ss_dssp --HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCT
T ss_pred --hhCHHHHHHHHHHHHHhhCCCceEEEEEeccccccCCCCHHHHHHHHHHHHHHHHhCCCC
Confidence 011223444455555567556689999999999864446778999999999999987744
|
| >1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0053 Score=61.32 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=73.0
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++.+++||+.|++.||| |..+ ..++++++..||+|+|.+....- ...
T Consensus 16 ~~vv~llk~~~i~~VRl---------------Y~~d-----~~vL~A~~~tgi~v~lgv~n~~~------------~~~- 62 (306)
T 1aq0_A 16 STVVSMFKSNGIKSMRL---------------YAPN-----QAALQAVGGTGINVVVGAPNDVL------------SNL- 62 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---------------SSCC-----HHHHHHHTTSCCEEEEEECGGGH------------HHH-
T ss_pred HHHHHHHHhcCCCEEEE---------------cCCC-----HHHHHHHHhcCCEEEEecccchh------------hHh-
Confidence 56778899999999999 2221 35788889999999998763100 000
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 324 (535)
....+.+.++++.-...| ....|.++-+-||+.. +. ...+..+++.+.+++++.+-.
T Consensus 63 --a~~~~~a~~wv~~nv~~y-~~~~I~~I~VGNEvl~-g~-~~~L~~am~~v~~aL~~~gl~ 119 (306)
T 1aq0_A 63 --AASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAG-GA-TRNLVPAMKNVHGALVAAGLG 119 (306)
T ss_dssp --HHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCG-GG-GGGHHHHHHHHHHHHHHTTCT
T ss_pred --hhCHHHHHHHHHHhhccC-CCccEEEEEecccccC-CC-HHHHHHHHHHHHHHHHHCCCC
Confidence 112344445555555556 4457999999999986 33 678899999999999987654
|
| >3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.069 Score=53.36 Aligned_cols=106 Identities=8% Similarity=0.060 Sum_probs=75.8
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
.+-+++||+.|++.||| |+.+ ..++++|+..||+|+|.+..-- . ...
T Consensus 17 ~~vv~llks~gi~~VRl---------------YdaD-----~~vL~Al~~sgi~v~vGV~n~~-------l-----~~l- 63 (316)
T 3em5_A 17 SEVIALYKKSNITRMRI---------------YDPN-----QAVLEALRGSNIELILGVPNSD-------L-----QSL- 63 (316)
T ss_dssp HHHHHHHHHTTCCEEEC---------------SSCC-----HHHHHHHTTCCCEEEEEECGGG-------H-----HHH-
T ss_pred HHHHHHHHHcCCCEEEE---------------ecCC-----HHHHHHhhcCCceEEEecccch-------h-----hhc-
Confidence 57888999999999999 2222 1488999999999999886410 0 000
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC----hHHHHHHHHHHHHHHHhcCCC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK----LDSLKTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~----~~~~~~~~~~~~~aIR~~~p~ 324 (535)
.....+.++++.-...|.....|.++-+-||+...... ...+...++.+..++++.+-.
T Consensus 64 ---a~~~~A~~WV~~nV~~y~p~~~I~~IaVGNEvl~~~~~t~~~~~~LvpAm~nv~~AL~~aGL~ 126 (316)
T 3em5_A 64 ---TNPSNAKSWVQKNVRGFWSSVRFRYIAVGNEISPVNRGTAWLAQFVLPAMRNIHDAIRSAGLQ 126 (316)
T ss_dssp ---TSHHHHHHHHHHHTGGGTTTSCEEEEEEEESCCTTCTTTGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred ---cCHHHHHHHHHHhhhhcCCCceEEEEEEecccccCCCccccCHHHHHHHHHHHHHHHHHCCCC
Confidence 01234445555555567666789999999999864332 678899999999999998754
|
| >4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0078 Score=64.53 Aligned_cols=127 Identities=13% Similarity=0.112 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhCC-CCcEEEEEeecCCCCC--C--C------ChHHHHHHHHHHHHHHHhcC---CCcEEEE-cCCCC-
Q 046395 271 TVAIIDFLASRYAD-HPSLVAIELMNEPKAP--D--L------KLDSLKTYYKAGYDTVRKYS---SSAYVIL-SNRLG- 334 (535)
Q Consensus 271 ~~~~~~~la~ry~~-~p~V~~~el~NEP~~~--~--~------~~~~~~~~~~~~~~aIR~~~---p~~~ii~-~~~~g- 334 (535)
..++.+.+|++|+. .+....||++|||... . . ....+.+|+..+.++||+.. |+..|.- +.+|.
T Consensus 120 ~~a~a~~~a~~~~~~e~~p~y~Ev~NEP~v~~~~~~~~~~~~~~~~~~~e~~~~vA~aIk~~~~~np~vkVGGpasA~p~ 199 (591)
T 4aw7_A 120 VQAAGAWSAEYYSNSELVPEFFEPLNEPFVHANDAGFTVQGQAMRELMVDFYASIGKHIHNNPRLNGKMKVIGYAAAYPA 199 (591)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEECSSSCGGGTTCTTCSSCHHHHHHHHHHHHHHHHHHHHTCTTTTTTCEEEEEEESCCC
T ss_pred HHHHHHHHHHHhccCCCCceeEEeccCCCcccccccccCCCchhHHHHHHHHHHHHHHHhccccCCCceeEecccccccc
Confidence 34455556666654 4456779999999832 2 1 24578899999999999875 6666432 12342
Q ss_pred ---CChhh-------hhcccCCCCcEEEEEeecCcCCCc----ccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEecc
Q 046395 335 ---GEWSE-------LLSFASNLSRVVIDVHFYNLFWDN----FNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW 400 (535)
Q Consensus 335 ---~~~~~-------~~~~~~~~~n~v~d~H~Y~~~~~~----~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEf 400 (535)
.++.. +++. .+..-..+++|.|.....+ .++...+..++-+.... ...+ ...+|++|+|+
T Consensus 200 ~e~~nF~~W~~~~k~Fmd~-ag~~mDf~S~H~Yd~~~~~~~~~rsGsn~EA~LDmie~Ys---~~k~--G~vKP~~ISEY 273 (591)
T 4aw7_A 200 WEDGNFNYWNTRMKMFIDR-AGAYMDGFSVHLYDGIVTGTDTKRSGSNSEAVLDMVEAYS---YIKF--GHVKPLAISEF 273 (591)
T ss_dssp TTTTTTHHHHHTHHHHHHH-HGGGCSEEEEEEEEEC-----CCCTTHHHHHHHHHHHHHH---HHHH--SSCCCEEEEEE
T ss_pred ccccchhhhhHHHHHHHHh-cCCCcCEEEEeecCCcccCCCccccCccHhHHHHHHHHHH---HHHh--CCCcceEEecc
Confidence 23222 2222 4557789999999753211 11112333344333321 1112 23467999999
Q ss_pred CCC
Q 046395 401 SCE 403 (535)
Q Consensus 401 g~~ 403 (535)
|.-
T Consensus 274 G~~ 276 (591)
T 4aw7_A 274 GGI 276 (591)
T ss_dssp EEE
T ss_pred CCc
Confidence 953
|
| >3kl0_A Glucuronoxylanase XYNC; alpha beta barrel, (beta/alpha)8 barrel (beta/alpha)8 + beta motif family, hydrolase; HET: TAR HIS; 1.64A {Bacillus subtilis} PDB: 3gtn_A* 3kl3_A* 3kl5_A* | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0035 Score=65.19 Aligned_cols=217 Identities=12% Similarity=0.095 Sum_probs=109.5
Q ss_pred HcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCC-CCCCCCCCCCCCChHHHH
Q 046395 191 QNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGS-PHSGSRDGFQEWSDSDIQ 269 (535)
Q Consensus 191 ~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~-~~sg~~~~~~~W~~~~~~ 269 (535)
.+|++.+|+||+.-. ..|. ....+++.|.+.||+++...-..|+-.... ...|...+ ....+++.+
T Consensus 46 g~g~s~~R~~ig~~~-------~~~~-----~~~~~~k~A~~~~~~i~aspWspP~WMk~~~~~~g~~~~-g~L~~~~y~ 112 (401)
T 3kl0_A 46 QLGFSILRIHVDENR-------NNWY-----KEVETAKSAVKHGAIVFASPWNPPSDMVETFNRNGDTSA-KRLKYNKYA 112 (401)
T ss_dssp CCCCCEEEEEECSSG-------GGGG-----GGHHHHHHHHHTTCEEEEEESCCCGGGEEEEEETTEEEE-EEECGGGHH
T ss_pred CCceEEEEEEeCCCc-------ccch-----hHHHHHHHHHhCCCEEEEecCCCCHHhccCCCcCCCccC-CcCChHHHH
Confidence 489999999997511 1232 234577778899999988888877632100 00000000 011246677
Q ss_pred HHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC----CCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCC--h-hhhh
Q 046395 270 ETVAIIDFLASRYADHP-SLVAIELMNEPKAP----DLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGE--W-SELL 341 (535)
Q Consensus 270 ~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~----~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~--~-~~~~ 341 (535)
.+.+++...++.|+++. .|-++.+.|||... ..+.+..++|+++... .. ...|++.+.+..+ + ..++
T Consensus 113 ~yA~Y~~k~i~~y~~~Gi~i~~is~qNEP~~~~~~~~~t~~~~~~fi~~~lg---~~--~tkI~~~d~~~~~~~~~~~il 187 (401)
T 3kl0_A 113 AYAQHLNDFVTFMKNNGVNLYAISVQNEPDYAHEWTWWTPQEILRFMRENAG---SI--NARVIAPESFQYLKNLSDPIL 187 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSEEESCSCTTSCTTSCCCCHHHHHHHHHHTGG---GC--SSEEEEEEESSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeeecccCCCCCCCCCCHHHHHHHHHHhcc---cc--CceEEecchhhhhhhhhHHHh
Confidence 77777777777776653 56678889999753 1233455555443322 11 2344554332111 1 1222
Q ss_pred ccc-CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC--CCCHHHHHHHH
Q 046395 342 SFA-SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE--GASKRDYQRFA 418 (535)
Q Consensus 342 ~~~-~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~--~~~~~~~~~~~ 418 (535)
..+ ....-..+.+|.|... ...+.. ..+. . +..+..++++|.+...... ......-..+.
T Consensus 188 ~D~~a~~~v~gia~H~Y~~~---~~~l~~------------~~~~-~-~~~~K~lw~TE~~~~~~~~~~~~~w~~al~~a 250 (401)
T 3kl0_A 188 NDPQALANMDILGTHLYGTQ---VSQFPY------------PLFK-Q-KGAGKDLWMTEVYYPNSDTNSADRWPEALDVS 250 (401)
T ss_dssp TCHHHHHTCSEEEEECTTCC---GGGSCC------------HHHH-H-HCTTCEEEEEEECCSCCCTTCTTCTTTTHHHH
T ss_pred cCHhHHhhCcEEEEEcCCCC---cccccc------------hhHH-h-hCCCCeEEEEecccCCCCCccccchhHHHHHH
Confidence 111 1112246799999642 111100 0011 1 1224569999986543211 11111112344
Q ss_pred HHHHHHHhhC-CcceEEEeeeeCCC
Q 046395 419 EAQLDVYGRA-TFGWAYWAYKFAES 442 (535)
Q Consensus 419 ~~ql~~~~~~-~~Gw~~W~~k~~~~ 442 (535)
+.....+... --+|.+|.+....+
T Consensus 251 ~~I~~~l~~~~~~a~v~Wnl~~~~G 275 (401)
T 3kl0_A 251 QHIHNAMVEGDFQAYVWWYIRRSYG 275 (401)
T ss_dssp HHHHHHHHTSCCSEEEEEESBSTTS
T ss_pred HHHHHHHHhccCcEEEEcccccCCC
Confidence 4444445433 35899999844333
|
| >1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.004 Score=64.78 Aligned_cols=60 Identities=23% Similarity=0.515 Sum_probs=52.8
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKV--IVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~V--IldlH~~pg 246 (535)
+..++.||++|+.-|.++| ||...++..+..| .|..++++++.+++.||++ |+.+|.+.|
T Consensus 36 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~l~~mv~~~GLKlq~vmSFHqCGg 97 (495)
T 1wdp_A 36 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQY---DWRAYRSLLQLVQECGLTLQAIMSFHQCGG 97 (495)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 7899999999999999999 7888888744558 7899999999999999997 888898654
|
| >1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1 | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0039 Score=64.76 Aligned_cols=60 Identities=28% Similarity=0.607 Sum_probs=52.8
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKV--IVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~V--IldlH~~pg 246 (535)
+..++.||++|+.-|.+.| ||...++..+..| .|..++++++.+++.||++ |+.+|.+.|
T Consensus 37 ~~~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mv~~~GLKlq~vmSFHqCGg 98 (498)
T 1fa2_A 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQY---DWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 7899999999999999999 7888888744558 7899999999999999997 888997754
|
| >2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0047 Score=64.61 Aligned_cols=60 Identities=27% Similarity=0.558 Sum_probs=52.7
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE--EEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKV--IVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~V--IldlH~~pg 246 (535)
+..++.||++|+.-|.++| ||...++..+..| .|..++++++.+++.||++ |+.+|.+.|
T Consensus 34 ~a~L~~LK~~GVdGVmvDV-WWGiVE~~~P~~Y---dWsgY~~L~~mvr~~GLKlq~vmSFHqCGg 95 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAY---DWSAYKQLFELVQKAGLKLQAIMSFHQCGG 95 (535)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCCEEEEEe-EeeeeccCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 7899999999999999999 7888887545558 7899999999999999997 888997744
|
| >2yih_A CEL44C, xyloglucanase; hydrolase, GH44, endo-glucanase, carbohydrate-binding protei; HET: BGC; 1.70A {Paenibacillus polymyxa} PDB: 2yjq_A* 2ykk_A* 3zq9_A* | Back alignment and structure |
|---|
Probab=96.09 E-value=0.014 Score=62.64 Aligned_cols=108 Identities=16% Similarity=0.158 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHcCCEEEEecCCC-------CCCCCCC-CCCC-CCCCCCC-----CC-----hHHHHHHHHHHHHHHHHh
Q 046395 222 ALDNAFRWAQKYGMKVIVDLHAL-------RVSQNGS-PHSG-SRDGFQE-----WS-----DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 222 ~ld~~i~~a~~~Gi~VIldlH~~-------pg~~ng~-~~sg-~~~~~~~-----W~-----~~~~~~~~~~~~~la~ry 282 (535)
.+|++++||++.|.++++.+.-. .|..... .+++ ...+++. .. +.......++++.|..+|
T Consensus 91 ~~~ef~~~~~~~g~e~m~~vnl~~~v~~~~~~~~~e~~~~~~~~w~e~~n~~~~~~~~~p~~~~g~~~~~~~~~~lr~~~ 170 (524)
T 2yih_A 91 VVTSFHDQSLKLGTYSLVTLPMAGYVAADGNGSVQESEAAPSARWNQVVNAKNAPFQLQPDLNDNYVYVDEFVHFLVNKY 170 (524)
T ss_dssp HHHHHHHHHHHHTCEEEEEECCSSEEECCCCEECCGGGCSSSTTEEEEESCCCSCCCSSCCSSSSEEEHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCeEEEEEecCcccccccCcChhHhhcCcccchhhhhccccCcccccCCCCCcchhHHHHHHHHHHHc
Confidence 38999999999999999999842 1110000 0000 0000000 00 001112357788888899
Q ss_pred CCC--C-cEEEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 283 ADH--P-SLVAIELMNEPKA----------PDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 283 ~~~--p-~V~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
+.. | .|-.|+|.|||.. ...+.+.+...+.+.++++|++||+..++.
T Consensus 171 G~~~~p~gVk~W~LgNE~dgWq~gh~~~~p~~~t~~ey~~~~~e~AkamK~vDP~i~l~g 230 (524)
T 2yih_A 171 GTASTKAGVKGYALDNEPALWSHTHPRIHPEKVGAKELVDRSVSLSKAVKAIDAGAEVFG 230 (524)
T ss_dssp CCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCCCCCeeEEEeccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHhCCCcEEEe
Confidence 763 2 4888999999974 123678999999999999999999977653
|
| >1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.084 Score=57.49 Aligned_cols=136 Identities=15% Similarity=0.227 Sum_probs=81.0
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc---ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCC-------
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI---AYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVS------- 247 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~---~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~------- 247 (535)
+.++.||++|+|+|=| ||.--. ..++......+ -+..+.|+++|+.|+++||+||||+ |....+
T Consensus 176 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 255 (583)
T 1ea9_C 176 DHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVL 255 (583)
T ss_dssp HTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHH
T ss_pred HhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccccCCCccHHHHHHH
Confidence 4589999999999997 442100 11111100001 1468999999999999999999998 432110
Q ss_pred ---C-C---CCCC-CC-------CCCCCC-----------CCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC
Q 046395 248 ---Q-N---GSPH-SG-------SRDGFQ-----------EWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP 300 (535)
Q Consensus 248 ---~-n---g~~~-sg-------~~~~~~-----------~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~ 300 (535)
. + .|-+ .+ ....+. .+. ++.++..++.++..++.|+=+ .+ -+++.++..
T Consensus 256 ~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvD-Gf-R~D~~~~~~-- 331 (583)
T 1ea9_C 256 KNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGID-GW-RLDVANEVS-- 331 (583)
T ss_dssp TTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCS-EE-EETTCTTSC--
T ss_pred hcCCCCCccCceEecCCCCCCCCCCCCceecCCCCCcceeccCCHHHHHHHHHHHHHHHHhcCce-EE-EecccccCC--
Confidence 0 0 0000 00 000111 122 677788888888888777432 22 255666532
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 301 DLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 301 ~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
..+++++.+++++..|+.+++-+
T Consensus 332 -------~~f~~~~~~~v~~~~p~~~~igE 354 (583)
T 1ea9_C 332 -------HQFWREFRRVVKQANPDAYILGE 354 (583)
T ss_dssp -------HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred -------HHHHHHHHHHHHhhCCCeEEEEE
Confidence 45778888889999998775544
|
| >2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A | Back alignment and structure |
|---|
Probab=95.83 E-value=0.18 Score=52.50 Aligned_cols=144 Identities=13% Similarity=0.208 Sum_probs=82.0
Q ss_pred HHHHHHHHcCCCEEEeCCccccccCCCCC-CC--C---c--cchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCC
Q 046395 184 EDFKFMSQNGLNAVRIPVGWWIAYDPKPP-KP--F---V--GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSG 255 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRipv~~w~~~~p~~~-~~--~---~--~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg 255 (535)
+-++.||++|+++|=|.=-+.. |..+ .+ | + -+..+.++++|+.|+++||+||+|+--- |.+
T Consensus 40 ~~Ldyl~~LGv~~i~l~Pi~~~---~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~Gi~vilD~V~N--------H~s 108 (424)
T 2dh2_A 40 GRLDYLSSLKVKGLVLGPIHKN---QKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKKSIRVILDLTPN--------YRG 108 (424)
T ss_dssp TTHHHHHHTTCSEEEECCCEEE---CTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCTT--------TTS
T ss_pred HHHHHHHHcCCCEEEECCCCCC---CCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEECCC--------cCC
Confidence 4578999999999998321111 1111 00 1 1 1468999999999999999999999521 111
Q ss_pred CCCCCCCCC----hHHHHHHHHHHHHHHHHhCCCCcEEEE--Eeec-CCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEE
Q 046395 256 SRDGFQEWS----DSDIQETVAIIDFLASRYADHPSLVAI--ELMN-EPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVI 328 (535)
Q Consensus 256 ~~~~~~~W~----~~~~~~~~~~~~~la~ry~~~p~V~~~--el~N-EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii 328 (535)
...|. ++.++...+.++.-.+ + .|-|| +..+ -|. . ..++++..+.+++..|+.+++
T Consensus 109 ----~~~wF~~q~~~Vr~~~~~~~~~Wl~-~----gvDGfRlD~v~~~~~-----~---~~~~~~~~~~~~~~~~~~~~i 171 (424)
T 2dh2_A 109 ----ENSWFSTQVDTVATKVKDALEFWLQ-A----GVDGFQVRDIENLKD-----A---SSFLAEWQNITKGFSEDRLLI 171 (424)
T ss_dssp ----SSTTCSSCHHHHHHHHHHHHHHHHH-H----TCCEEEECCGGGSTT-----H---HHHHHHHHHHHHHHCTTCEEE
T ss_pred ----CcccccccCHHHHHHHHHHHHHHHH-c----CCCEEEEeccccCCc-----c---HHHHHHHHHHHHHhCCCcEEE
Confidence 01232 4566666677766665 3 22233 3333 222 1 235555666778888876666
Q ss_pred EcCCCCCChhhhhcccCCCCcEEEEEee
Q 046395 329 LSNRLGGEWSELLSFASNLSRVVIDVHF 356 (535)
Q Consensus 329 ~~~~~g~~~~~~~~~~~~~~n~v~d~H~ 356 (535)
++..+ .+...+........+.++++|+
T Consensus 172 ~~e~~-~~~~~~~~~~~~~~~~~~~f~~ 198 (424)
T 2dh2_A 172 AGTNS-SDLQQILSLLESNKDLLLTSSY 198 (424)
T ss_dssp EECSC-CCHHHHHHHTTTCTTCEEECST
T ss_pred EEEec-CCHHHHHHHhccccccccchhh
Confidence 66555 3444443332222234666554
|
| >3zr5_A Galactocerebrosidase; hydrolase, GALC, glycosyl hydrolase, krabbe disease, TIM BAR lectin domain; HET: NAG; 2.10A {Mus musculus} PDB: 3zr6_A* | Back alignment and structure |
|---|
Probab=95.60 E-value=0.047 Score=60.14 Aligned_cols=206 Identities=16% Similarity=0.033 Sum_probs=105.1
Q ss_pred HcCCCEEEeCCccccc----cCCCCCCCC--ccch-HHHHHHHHHHHHHcC--CEEEEecCCCCCCCCCCCCCCCCCCCC
Q 046395 191 QNGLNAVRIPVGWWIA----YDPKPPKPF--VGGS-LQALDNAFRWAQKYG--MKVIVDLHALRVSQNGSPHSGSRDGFQ 261 (535)
Q Consensus 191 ~~G~N~VRipv~~w~~----~~p~~~~~~--~~~~-l~~ld~~i~~a~~~G--i~VIldlH~~pg~~ng~~~sg~~~~~~ 261 (535)
-+|++.+|+||+--.+ .++... .+ +.+. ....-.+++.|++++ |+++..--.+|+-... +.
T Consensus 64 Gigls~~R~~IG~~dfs~~~~~~~~f-~~~~d~~~~~~~~i~~lk~A~~~~p~lki~aspWSpP~WMK~----n~----- 133 (656)
T 3zr5_A 64 GASLHILKVEIGGDGQTTDGTEPSHM-HYELDENYFRGYEWWLMKEAKKRNPDIILMGLPWSFPGWLGK----GF----- 133 (656)
T ss_dssp SSCCSEEEEEECCSSBCSSSBCCCSC-SSTTCCCSCCSSHHHHHHHHHHHCTTCEEEEEESCBCGGGGT----TS-----
T ss_pred CCeeEEEEEEecCCCccCCCCCCcCC-ccccccchhhchhHHHHHHHHHhCCCcEEEEecCCCcHHhcc----CC-----
Confidence 5799999999974111 111111 01 1111 112234455555554 7787777777763321 10
Q ss_pred CCChHHHHHHHHHHHHHHHHh-CCC-CcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC-cEEEEc-CCCCCCh
Q 046395 262 EWSDSDIQETVAIIDFLASRY-ADH-PSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSS-AYVILS-NRLGGEW 337 (535)
Q Consensus 262 ~W~~~~~~~~~~~~~~la~ry-~~~-p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~-~~ii~~-~~~g~~~ 337 (535)
.+.+++.+.+++++....+.| +.+ =.|-++.+.|||... ..|.+.+..++++.+.+ ..|++. ..|....
T Consensus 134 ~l~~~~y~~yA~Ylvk~i~~y~~~~GI~i~~Is~qNEP~~~-------~~fik~L~p~L~~~gl~~~kI~~~D~n~~~~~ 206 (656)
T 3zr5_A 134 SWPYVNLQLTAYYVVRWILGAKHYHDLDIDYIGIWNERPFD-------ANYIKELRKMLDYQGLQRVRIIASDNLWEPIS 206 (656)
T ss_dssp SCTTSSHHHHHHHHHHHHHHHHHHHCCCCCEECSCTTSCCC-------HHHHHHHHHHHHHTTCTTCEEEEEEECSTTHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhcCCceEEEeeccCCCcc-------ccHHHHHHHHHHHcCCCccEEEEcCCCchHHH
Confidence 122345555555555555543 222 256778899999852 35677788888998876 445554 3442111
Q ss_pred hhhhc-ccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHH
Q 046395 338 SELLS-FASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQR 416 (535)
Q Consensus 338 ~~~~~-~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~ 416 (535)
..++. ......-.++.+| |.... . . .. .. .. +.++++.|.+..++. ......
T Consensus 207 ~~il~d~~a~~~v~gia~H-Y~g~~---~---~-~~------------~~--~p-~k~lw~TE~~~~~~~----~~g~g~ 259 (656)
T 3zr5_A 207 SSLLLDQELWKVVDVIGAH-YPGTY---T---V-WN------------AK--MS-GKKLWSSEDFSTINS----NVGAGC 259 (656)
T ss_dssp HHHHHCHHHHHHCCEEEEE-SCTTC---C---C-HH------------HH--HH-TCEEEEEEEECSCTT----HHHHHH
T ss_pred HHHhcCHhHHhhccEEEEE-CCCCC---c---c-hH------------hh--CC-CCceEEEccccCCCC----CCCccH
Confidence 12221 1111223578999 64311 0 1 00 00 12 345999998754431 111223
Q ss_pred HHHHHHHHH-hhCCcceEEEeeeeC
Q 046395 417 FAEAQLDVY-GRATFGWAYWAYKFA 440 (535)
Q Consensus 417 ~~~~ql~~~-~~~~~Gw~~W~~k~~ 440 (535)
|.+.....+ ....-+|++|.+-.+
T Consensus 260 wa~~i~~~~~~~~~~a~i~Wnl~ld 284 (656)
T 3zr5_A 260 WSRILNQNYINGNMTSTIAWNLVAS 284 (656)
T ss_dssp HHHHHHHHHHHHCCCEEEEECSEEC
T ss_pred HHHHHHHHHHhCCceEEEEEeeeeC
Confidence 433333222 334569999998765
|
| >1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A* | Back alignment and structure |
|---|
Probab=95.54 E-value=0.13 Score=56.11 Aligned_cols=136 Identities=12% Similarity=0.211 Sum_probs=79.6
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc---ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCC-------
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI---AYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVS------- 247 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~---~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~------- 247 (535)
+.++.||++|+|+|=| ||.--. ..++......+ -+..+.|+++|+.|+++||+||||+ |....+
T Consensus 180 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 259 (588)
T 1j0h_A 180 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVW 259 (588)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcCcccchhHHHHH
Confidence 4589999999999997 442100 01110000000 1458999999999999999999999 432111
Q ss_pred ----CCC---CCC-CC--C----CCCC-----------CCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC
Q 046395 248 ----QNG---SPH-SG--S----RDGF-----------QEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD 301 (535)
Q Consensus 248 ----~ng---~~~-sg--~----~~~~-----------~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~ 301 (535)
.+. |-+ .+ . ...+ ..+. ++.++..++.++..++.|+=+ .+ -+++.++-.
T Consensus 260 ~~g~~s~y~dwy~~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~Vr~~l~~~~~~Wl~~~giD-Gf-R~D~a~~~~--- 334 (588)
T 1j0h_A 260 KNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFDID-GW-RLDVANEID--- 334 (588)
T ss_dssp HHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHCCC-EE-EETTGGGSC---
T ss_pred hcCCCCCcccccccccCCCCCCCCCCeEEecCCCCccccccCCHHHHHHHHHHHHHHHHhcCCc-EE-EEeccccCC---
Confidence 000 000 00 0 0000 0122 677788888888888777432 22 255666532
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 302 LKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 302 ~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
..+.+++.+++++..|+.+++-+
T Consensus 335 ------~~f~~~~~~~v~~~~p~~~~igE 357 (588)
T 1j0h_A 335 ------HEFWREFRQEVKALKPDVYILGE 357 (588)
T ss_dssp ------HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ------HHHHHHHHHHHHHhCCCeEEEEE
Confidence 46777888889999998775543
|
| >1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A | Back alignment and structure |
|---|
Probab=95.27 E-value=0.15 Score=55.38 Aligned_cols=135 Identities=15% Similarity=0.171 Sum_probs=77.9
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc---ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC------
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI---AYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ------ 248 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~---~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~------ 248 (535)
+.++.||++|+|+|=| ||.--. ..++......+ -+..+.|+++|+.|+++||+||||+ |......
T Consensus 177 ~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~ 256 (585)
T 1wzl_A 177 DRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDVL 256 (585)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHHH
T ss_pred HHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEcCCcCCCccHHHHHHH
Confidence 4589999999999997 442100 01110000000 1458999999999999999999998 4321100
Q ss_pred -----CC---CCC-CCC------CCC----------C--CCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC
Q 046395 249 -----NG---SPH-SGS------RDG----------F--QEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP 300 (535)
Q Consensus 249 -----ng---~~~-sg~------~~~----------~--~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~ 300 (535)
+. |-+ .+. ... . ..+. ++.++..++.++..+ .|+=+ .+ -+++.++..
T Consensus 257 ~~g~~s~y~~~y~~~~~~~~~~~~~~y~~~~~~~~~~pdln~~~~~vr~~l~~~~~~Wl-~~gvD-Gf-R~D~a~~~~-- 331 (585)
T 1wzl_A 257 QKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWM-EQGID-GW-RLDVANEVD-- 331 (585)
T ss_dssp HHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHH-HTTCC-EE-EETTGGGSC--
T ss_pred hcCCCCCccCceEecCCCCCCCCCCCeeEcccCCCCCCeeCcCCHHHHHHHHHHHHHHH-hCCCe-EE-EEeccccCC--
Confidence 00 000 000 000 0 1122 667777777777777 56321 22 255666542
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 301 DLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 301 ~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
..+++++.+++++..|+.+++-+
T Consensus 332 -------~~f~~~~~~~v~~~~p~~~~igE 354 (585)
T 1wzl_A 332 -------HAFWREFRRLVKSLNPDALIVGE 354 (585)
T ss_dssp -------HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred -------HHHHHHHHHHHHHHCCCEEEEEE
Confidence 45778888889999998775543
|
| >2vx5_A Cellvibrio japonicus mannanase cjman26C; hydrolase; HET: BMA; 1.47A {Cellvibrio japonicus} PDB: 2vx4_A* 2vx6_A* 2vx7_A* | Back alignment and structure |
|---|
Probab=95.26 E-value=1 Score=46.30 Aligned_cols=203 Identities=13% Similarity=0.077 Sum_probs=105.2
Q ss_pred chHHHHHHHHHHHHHcCCEEEEecCCC-CCCC-CCCCCCCCCCCCCCCC-----hHHHHHHHHHHHHHHHH---hCCC--
Q 046395 218 GSLQALDNAFRWAQKYGMKVIVDLHAL-RVSQ-NGSPHSGSRDGFQEWS-----DSDIQETVAIIDFLASR---YADH-- 285 (535)
Q Consensus 218 ~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~~-ng~~~sg~~~~~~~W~-----~~~~~~~~~~~~~la~r---y~~~-- 285 (535)
..++.+.+.+..+.++|--|.|.+|.. |... +.++ +. ..+. ....+.+.+.++.+|+. +++.
T Consensus 109 ~~~~~~~~~~~~~~~~Ggi~~isWh~~~p~~~~~~~~-~~-----~~~~~i~~Gg~~~~~~~~~id~iA~~l~~L~~~~~ 182 (396)
T 2vx5_A 109 VNFEKMQHWIKAGYSRGGVITISWHVFNPVSGGNSWD-KT-----PAVHELIPGGARHATLKAYLDTFVAFNEGLADVDA 182 (396)
T ss_dssp CBHHHHHHHHHHHHHTTCEEEEECCCCCTTTSCCTTC-CC-----CCHHHHSTTSTTHHHHHHHHHHHHHHHHTTCEECT
T ss_pred CChHHHHHHHHHHHHCCCeEEEEEeeCCCCCCCCCcC-ch-----HHHHHHhCCChhHHHHHHHHHHHHHHHHHhhhhhc
Confidence 356777777777888999999999954 3211 1111 10 0000 01223455666666654 4321
Q ss_pred ------CcEEEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHh-cCCCcEEEE-cCCCCC-----Chhhhhcc-c
Q 046395 286 ------PSLVAIELMNEPKAP-------DLKLDSLKTYYKAGYDTVRK-YSSSAYVIL-SNRLGG-----EWSELLSF-A 344 (535)
Q Consensus 286 ------p~V~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~-~~p~~~ii~-~~~~g~-----~~~~~~~~-~ 344 (535)
|.|+ |-...|..+. ..+++.+++.++.+++++|+ ...+.++.+ +..-+. +...+... |
T Consensus 183 ~G~~v~~PV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwsp~~~~~~~~~~~~~~~~~YP 261 (396)
T 2vx5_A 183 QGNKHYPPII-FRPWHEHNGDWFWWGKGHASEQDYIALWRFTVHYLRDEKKLRNLIYAYSPDRSRIDMANFEAGYLYGYP 261 (396)
T ss_dssp TSCEECCCEE-EECSCSTTSSSSTTSBTTBCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCBGGGSCGGGHHHHHTTTCC
T ss_pred cCCccCCCEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCCcEEEEEcCCCCccccCCCccchhhcCC
Confidence 1344 8999999864 12478999999999999994 455555443 331100 11223222 2
Q ss_pred CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHH
Q 046395 345 SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDV 424 (535)
Q Consensus 345 ~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~ 424 (535)
..+--.++.+-.|......-...+.....+.+.. ....+..+.+..++|+.|+|+|...... .. .|.+..++.
T Consensus 262 GDdyVDivG~D~Y~~~~~~~~~~~~~~f~~~~~~-~~~~l~~~a~~~~Kpial~E~G~~~~~d---~~---~w~~~l~~~ 334 (396)
T 2vx5_A 262 GDAYVDIIGLDNYWDVGHEANTASADEQKAALTA-SLKQLVQIARSKGKIAALTETGNNRLTI---DN---FWTERLLGP 334 (396)
T ss_dssp CGGGCSEEEEECCGGGTCTTCCSCHHHHHHHHHH-HHHHHHHHHHHHTCEEEEEEECCTTCCS---TT---HHHHTTHHH
T ss_pred CCceEEEEEEeccCCCCCCccccchhhHHHHHHH-HHHHHHHHhhcCCCeEEEEeecCCCCCc---hH---HHHHHHHHH
Confidence 2233457777788643211001111121211222 1123344444446679999999764321 11 344444555
Q ss_pred HhhCC--cceEE
Q 046395 425 YGRAT--FGWAY 434 (535)
Q Consensus 425 ~~~~~--~Gw~~ 434 (535)
+.+.. +.|+|
T Consensus 335 ~~~~~~v~~~~y 346 (396)
T 2vx5_A 335 ISADADASEIAY 346 (396)
T ss_dssp HHTSTTGGGCCE
T ss_pred HHhCccccceEE
Confidence 65544 44443
|
| >4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A | Back alignment and structure |
|---|
Probab=95.22 E-value=0.073 Score=60.32 Aligned_cols=168 Identities=11% Similarity=0.064 Sum_probs=103.8
Q ss_pred HHHHHHHHHcCCCEEEeCCccc-----------------------------cccC-CC-CCCC----CccchHHHHHHHH
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWW-----------------------------IAYD-PK-PPKP----FVGGSLQALDNAF 227 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w-----------------------------~~~~-p~-~~~~----~~~~~l~~ld~~i 227 (535)
|++|++|+=.|+|..=..++-+ .++. -. =++| |.+..++.=.+++
T Consensus 314 EreIDWMAL~GiNlpLa~~GqEavw~~v~~~lG~t~~ei~~ff~GPAflaW~rMgNl~~wgGPLp~~w~~~q~~Lq~kIl 393 (914)
T 4a4a_A 314 EEFLDWCAMNGVNLVLDIIGQEEVLRRTLNEFGYSDEEVKEFISGPAYFAWFYMQNMTGFGGPLPNDWFEQRAELGRKMH 393 (914)
T ss_dssp HHHHHHHHHTTCCEEECCTTHHHHHHHHHGGGTCCHHHHHHHSCCTTCHHHHHTTSCCSTTCCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhhhhhhhHHHHHHHHHHcCCCHHHHHHhcCCchhhHHHHhcCccccCCCCCHHHHHHHHHHHHHHH
Confidence 9999999999999987544321 1110 00 0122 3345666678899
Q ss_pred HHHHHcCCEEEEecCC--CC--------C-------CCCCCCCCCCCCCCCCC----ChHHHHHHHHHHHHHHHHhCCCC
Q 046395 228 RWAQKYGMKVIVDLHA--LR--------V-------SQNGSPHSGSRDGFQEW----SDSDIQETVAIIDFLASRYADHP 286 (535)
Q Consensus 228 ~~a~~~Gi~VIldlH~--~p--------g-------~~ng~~~sg~~~~~~~W----~~~~~~~~~~~~~~la~ry~~~p 286 (535)
+.++++||.+||=-.. .| . ..+++..+...+ ..+ .|-+.+-...|+++..+.|++..
T Consensus 394 ~RmrelGM~PVLPaF~G~VP~~~~~~~P~a~i~~~~~W~gf~~~~~~~--~~~l~p~dplF~~i~~~F~~~q~~~yG~~~ 471 (914)
T 4a4a_A 394 DRMQSFGINPVLQGYSGMVPRDFKEKNQEAQTISQGGWCGFDRPDMLK--TYVNEGEADYFQKVADVFYEKQKEVFGDVT 471 (914)
T ss_dssp HHHHHHTCEEEEECCSCEECTTHHHHSTTCCEECCCEETTEECCEEEC--SSCCTTSCCHHHHHHHHHHHHHHHHHCSCC
T ss_pred HHHHHcCCeecCCCcCCCCChHHHhhCCCCeeecCCCCCCCCCchhcc--cccCCCCChHHHHHHHHHHHHHHHHhCCcc
Confidence 9999999999984431 12 1 111111110000 111 14577788899999999999877
Q ss_pred cEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCC-CChhhhhcccCC-CCcEEEEEe
Q 046395 287 SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG-GEWSELLSFASN-LSRVVIDVH 355 (535)
Q Consensus 287 ~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g-~~~~~~~~~~~~-~~n~v~d~H 355 (535)
++.+.+++||-..++. ..+....+.+++++++.+|+.+-++-+ |- .....++.-... ..-+|+|++
T Consensus 472 h~Y~~D~FnE~~~~~~--~~l~~~~~~v~~am~~~dp~AvWv~Qg-W~~~~~~~~L~~vp~~~~mlvLDL~ 539 (914)
T 4a4a_A 472 NFYGVDPFHQGGNTGD--LDNGKIYEIIQNKMIEHDNDAVWVIQN-WQGNPSNNKLEGLTKKDQAMVLDLF 539 (914)
T ss_dssp SEEECCTTTTSCCCTT--CCHHHHHHHHHHHHHHHCTTCEEEEEE-BTTBSCHHHHTTCSCGGGEEEEETT
T ss_pred cccccCccccCCCCCC--cCHHHHHHHHHHHHHHhCCCCEEEEcc-cCCCChHHHHhCCCCCCCEEEEEcc
Confidence 8999999999532211 226788899999999999998755533 32 111233332222 456677754
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.24 Score=44.15 Aligned_cols=107 Identities=16% Similarity=0.256 Sum_probs=75.4
Q ss_pred CCCceeEEEEeecCcEEEEecC---CCceEEeccCCCCCCCCceeEEEEecCCeEEEEee-CCcEEEeecC----CCeEE
Q 046395 15 LDGTQVQLISTKLKKYLTAENG---SETILMANHNSSSTSSWQTFRLWRINETFYNFRLS-NKQFIGLENQ----GNKLV 86 (535)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~a~~~---g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~-~~~~v~~~~~----~~~~~ 86 (535)
+++...+|+++..|+.|-...+ .|+.|+.-.-.. +.-..|++-..+++.|.||.. .++.+.+.+. |..|+
T Consensus 24 ~~~g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~--~~~Q~W~~~~~~~g~y~i~~~~sg~cLdv~~~~~~~G~~v~ 101 (165)
T 3pg0_A 24 MGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSG--GDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVI 101 (165)
T ss_dssp --CCEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCC--CGGGCEEEEEEETTEEEEEETTTCCEEEEGGGCCSTTCBEE
T ss_pred CCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCC--CccceEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEE
Confidence 4567889999999999987643 245565544444 456778888888899999954 7888877532 33476
Q ss_pred EeccCCCCCCceEEEecCCCCceeEEEecC-CceEEEecc
Q 046395 87 AVSATEKFPEPFQITRKNGEPHRVRFRASN-GYFLQAKSE 125 (535)
Q Consensus 87 a~~~~~~~~e~f~~~~~~~~~~~v~I~~~n-G~flq~~~~ 125 (535)
-.....+..+.|.+.+.+++ ..+|+..+ |+.|.+.+.
T Consensus 102 ~~~c~~~~~Q~W~~~~~g~g--~~~i~~~~sg~cLdv~~~ 139 (165)
T 3pg0_A 102 QYSYSGGDNQQWRLVDLGDG--YYKLVARHSGKALDVENA 139 (165)
T ss_dssp EECCCCCGGGCEEEEECSSS--CEEEEETTTCCEEEEGGG
T ss_pred EEcCCCCCccEEEEEECCCC--EEEEEECCCCcEEEcCCC
Confidence 66666778999999997654 36677654 888877654
|
| >3ik2_A Endoglucanase A; TIM-like barrel, hydrolase; 2.20A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=94.92 E-value=0.057 Score=56.89 Aligned_cols=58 Identities=17% Similarity=0.241 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhCCCC---cEEEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCcEEE
Q 046395 271 TVAIIDFLASRYADHP---SLVAIELMNEPKA----------PDLKLDSLKTYYKAGYDTVRKYSSSAYVI 328 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p---~V~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~ii 328 (535)
..++++.|.++|+... .|..|+|.|||.. ...+.+.+.+++.+...+||+++|...++
T Consensus 152 ~~e~v~~l~~~~G~~~~p~~Vkyw~lgNEpdlW~~tH~dvhp~~~t~eEY~~~~~~~AkAmK~vDP~ikl~ 222 (517)
T 3ik2_A 152 MDEFVNYLVNKYGSASGSKGIKGYSLDNEPSLWPSTHPLIHPDKTKCSEVLDKDTQLAQVVKKIDPAAETF 222 (517)
T ss_dssp HHHHHHHHHHHHCCTTSTTSCCEEEESSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCCCceeEEecCCCcccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 3567888889998753 7999999999952 24578899999999999999999997653
|
| >3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis H37RV, mesophilic human pathogen, RV1326C gene, glycosyl transferase; 2.33A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=94.91 E-value=0.59 Score=52.04 Aligned_cols=144 Identities=16% Similarity=0.147 Sum_probs=82.1
Q ss_pred HHHHHHHHHcCCCEEEe-CCcccc-----ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC--C
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWI-----AYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ--N 249 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~-----~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~--n 249 (535)
++-+..||++|+|+|-| |+.... ..++......+ -+..+.|.++|+.|.++||+||+|+ |...... .
T Consensus 267 ~~l~~yLk~lG~t~I~L~Pi~e~~~~~~wGY~~~~y~a~~~~yGt~~dfk~lV~~~H~~GI~VilD~V~NH~~~~~~~~~ 346 (722)
T 3k1d_A 267 RELTDYIVDQGFTHVELLPVAEHPFAGSWGYQVTSYYAPTSRFGTPDDFRALVDALHQAGIGVIVDWVPAHFPKDAWALG 346 (722)
T ss_dssp HHHHHHHHHHTCSEEEESCCEECSCGGGTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECTTCCCCCTTTTT
T ss_pred HHHHHHHHHcCCCeEEECCcccCCCCCCCCCCcccCcCccccCCCHHHHHHHHHHHHHcCCEEEEEEEeeccCCccchhh
Confidence 44458999999999997 443210 01110000000 1458999999999999999999999 4322110 0
Q ss_pred CCC------CCCC-CCCCCCCC--------hHHHHHHHHHHHHHHHHhCCCCcEEEEEee-----------------cCC
Q 046395 250 GSP------HSGS-RDGFQEWS--------DSDIQETVAIIDFLASRYADHPSLVAIELM-----------------NEP 297 (535)
Q Consensus 250 g~~------~sg~-~~~~~~W~--------~~~~~~~~~~~~~la~ry~~~p~V~~~el~-----------------NEP 297 (535)
.++ +... ......|. ++.++..++.+...+++|+=+- +-++.. |+-
T Consensus 347 ~fdg~~~y~~~d~~~~~~~~Wg~~~ln~~~p~Vr~~l~~~~~~Wl~~~gvDG--fR~Dav~~mly~d~~r~~g~w~~n~~ 424 (722)
T 3k1d_A 347 RFDGTPLYEHSDPKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDG--LRVDAVASMLYLDYSRPEGGWTPNVH 424 (722)
T ss_dssp TTTSSCCSBCCCCCSSSTTCCCCCCBCTTSHHHHHHHHHHHHHHHHHSCCCE--EEECCTHHHHBCCCCCCSSCCSCCCS
T ss_pred cCCCCcccccCCcccCccCCCCCeeecCCCHHHHHHHHHHHHHHHHHhCCCE--EEEcchhhhhhccccccccccccccC
Confidence 000 0000 00122332 6777888888888888764311 112211 111
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 298 KAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
. ...+ ..-..+.+++.++|++..|+.+++-+
T Consensus 425 g-g~~n-~~~~~fl~~l~~~v~~~~P~~~~iaE 455 (722)
T 3k1d_A 425 G-GREN-LEAVQFLQEMNATAHKVAPGIVTIAE 455 (722)
T ss_dssp S-CSBC-HHHHHHHHHHHHHHHHHSTTCEEEEC
T ss_pred C-CccC-hHHHHHHHHHHHHHHHhCCCeEEEEE
Confidence 1 0112 23568899999999999999876654
|
| >3ii1_A Cellulase; CELM2, glucanase-xyanase, glucanase, xylanase, bifunctional enzyme, hydrolase; HET: BGC; 2.25A {Uncultured bacterium} PDB: 3fw6_A | Back alignment and structure |
|---|
Probab=94.77 E-value=0.29 Score=52.09 Aligned_cols=108 Identities=17% Similarity=0.167 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHcCCEEEEecCCCC--------------------CCCCCCCC-----CC--CC-CC------CCCCC--
Q 046395 221 QALDNAFRWAQKYGMKVIVDLHALR--------------------VSQNGSPH-----SG--SR-DG------FQEWS-- 264 (535)
Q Consensus 221 ~~ld~~i~~a~~~Gi~VIldlH~~p--------------------g~~ng~~~-----sg--~~-~~------~~~W~-- 264 (535)
...+.+++..+++|.+.||.+..+. |.|...+. +| -. ++ .+...
T Consensus 93 ~~~~~~~~~~~~~g~~~~~T~~~~g~v~~~~~~~~~~~~~s~~~~~~q~~~~~~w~~~~gn~~~~~~~~~~~~~p~~~~~ 172 (535)
T 3ii1_A 93 ERGDTFIANSQAAGAQAMITIPTIGWVARLGANRSKLASFSIAKYGAQSGNDWQWFPDAGNGVLTSGQNVTGNNPNDANT 172 (535)
T ss_dssp HHHHHHHHHHHTTTCEEEEEECCSSEEECCBGGGBCEETTBHHHHCCBSCEETTTEEEEECSBBTTSCBCCSCCGGGTEE
T ss_pred hHHHHHHHHHHhcCCceeEEEeccceEecccccCCccccccccccCcccCCccccCCccCCccccCCcccCCCCcccccC
Confidence 5788999999999999999997431 11211110 00 00 00 01111
Q ss_pred hHHHHHHHHHHHHHHHHhCCC--CcEEEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCcEEE
Q 046395 265 DSDIQETVAIIDFLASRYADH--PSLVAIELMNEPKA----------PDLKLDSLKTYYKAGYDTVRKYSSSAYVI 328 (535)
Q Consensus 265 ~~~~~~~~~~~~~la~ry~~~--p~V~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~ii 328 (535)
+.......+++..|.++|+.. -.|-.|+|-|||.. ...+.+.+.+.+.+..++||++||...|+
T Consensus 173 ~~~~~y~~~~v~~l~~~~G~~~~~~vk~w~l~NE~dlW~~th~d~hp~~~t~~e~~~~~~~~Aka~K~~DP~i~l~ 248 (535)
T 3ii1_A 173 LVDSTFQQGWAQHLVSQWGTAAGGGLRYYILDNEPSIWFSTHRDVHPVGPTMDEIRDKMLDYGAKIKTVDPSALIV 248 (535)
T ss_dssp ECCHHHHHHHHHHHHHHHCCTTTTSCCEEEECSCGGGHHHHTTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred CCcHHHHHHHHHHHHHhcCccCCCCceEEEeCCccccccccccccCCCCCCHHHHHHHHHHHHHHHHhhCCCcEEe
Confidence 123556667778888888653 36889999999942 12467789999999999999999998866
|
| >2e4t_A Endoglucanase, xyloglucanase; TIM barrel, TIM-like barrel, composite domain of glycosyl HY families 5, 30, 39 and 51, hydrolase; 0.96A {Clostridium thermocellum} PDB: 2e0p_A 2eo7_A* 2ej1_A* 2eex_A* 2eqd_A* | Back alignment and structure |
|---|
Probab=94.66 E-value=0.16 Score=54.35 Aligned_cols=107 Identities=17% Similarity=0.222 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHcCC-EEEEecCCCCC-C-C-CCC-----CCCC-----------CCCCCCCCChHHHHHHHHHHHHHHHH
Q 046395 222 ALDNAFRWAQKYGM-KVIVDLHALRV-S-Q-NGS-----PHSG-----------SRDGFQEWSDSDIQETVAIIDFLASR 281 (535)
Q Consensus 222 ~ld~~i~~a~~~Gi-~VIldlH~~pg-~-~-ng~-----~~sg-----------~~~~~~~W~~~~~~~~~~~~~~la~r 281 (535)
.+++++++|++.|. ++|+.+.-... + . .+. .+++ .........+.......++++.|..+
T Consensus 89 ~~~~f~~~~~~~g~~~~m~tvnl~~~~~~d~a~~~~e~~~~~~~~w~~~~~~~~~~~~~~p~~~~g~~~~~ewv~yl~~~ 168 (519)
T 2e4t_A 89 VVTTFHDKALSKNVPYTLITLQAAGYVSADGNGPVSQEETAPSSRWKEVKFEKGAPFSLTPDTEDDYVYMDEFVNYLVNK 168 (519)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCSSEEESCCCEECCGGGCSSSTTEEEEESCCCSCCCSSCCTTSSEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHhcCCCceEEEEecCCccchhccccchhhccCCcccccccccccCCccccCCCCCCChHHHHHHHHHHHHh
Confidence 79999999999998 99988874321 0 0 000 0000 00000000001112345666777778
Q ss_pred hCCC--C-cEEEEEeecCCCC----------CCCChHHHHHHHHHHHHHHHhcCCCcEEE
Q 046395 282 YADH--P-SLVAIELMNEPKA----------PDLKLDSLKTYYKAGYDTVRKYSSSAYVI 328 (535)
Q Consensus 282 y~~~--p-~V~~~el~NEP~~----------~~~~~~~~~~~~~~~~~aIR~~~p~~~ii 328 (535)
|+.. | .|-.|+|.|||.. ...+.+.+.+.+.+.++++|.++|+..++
T Consensus 169 nG~~~~P~~VkyW~lGNE~dgW~~gh~~~~p~~~t~~ey~~~~~~~AkamK~~DP~i~l~ 228 (519)
T 2e4t_A 169 YGNASTPTGIKGYSIDNEPALWSHTHPRIHPDNVTAKELIEKSVALSKAVKKVDPYAEIF 228 (519)
T ss_dssp HCCTTSTTSCCEEEECSCGGGHHHHCTTTCCSCCCHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred cCCCcCCCCccEEEeCccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence 8664 2 5888999999932 12357899999999999999999996654
|
| >3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A | Back alignment and structure |
|---|
Probab=94.63 E-value=0.4 Score=52.25 Aligned_cols=139 Identities=11% Similarity=0.035 Sum_probs=78.5
Q ss_pred HHHHHHHHHcCCCEEEe-CCccc-------cccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC-
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWW-------IAYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ- 248 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w-------~~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~- 248 (535)
.+-++.|+++|+|+|=| ||.-- ...++......+ -+..+.++++|+.|+++||+||+|+ |..+.+.
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~ 230 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWW 230 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGG
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHcCCEEEEEECCcccCCcchh
Confidence 46688999999999998 43210 001110000001 1568999999999999999999999 4322110
Q ss_pred --C----CCCC-------CCC-----CC------------------C--CCCCC-hHHHHHHHHHHHHHHHHhCCCCcEE
Q 046395 249 --N----GSPH-------SGS-----RD------------------G--FQEWS-DSDIQETVAIIDFLASRYADHPSLV 289 (535)
Q Consensus 249 --n----g~~~-------sg~-----~~------------------~--~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~ 289 (535)
. .|-+ +.. .+ + ...|. ++.++...+.++..++.|+=+ . +
T Consensus 231 ~~~~p~~dw~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~GVD-G-f 308 (601)
T 3edf_A 231 MKDLPTPDWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLS-G-L 308 (601)
T ss_dssp GGSCSSTTSBGGGGSCCBCCCCGGGGGCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCS-E-E
T ss_pred hhhCCccCceeeCCCCCCCccccccccCCCCccccccccccccccccccccccCCHHHHHHHHHHHHHHHhhcCCC-E-E
Confidence 0 0000 000 00 0 01112 667777788888888666421 1 2
Q ss_pred EEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCC
Q 046395 290 AIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333 (535)
Q Consensus 290 ~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~ 333 (535)
-++..+.. + ..+.++..+++++..|+.++ ++-.|
T Consensus 309 RlD~~~~~-----~----~~f~~~~~~~v~~~~p~~~~-vgE~~ 342 (601)
T 3edf_A 309 RIDTYGYS-----D----GAFLTEYTRRLMAEYPRLNM-VGQEW 342 (601)
T ss_dssp EESSGGGS-----C----HHHHHHHHHHHHHHCTTCEE-EECCC
T ss_pred EeeccccC-----C----HHHHHHHHHHHHHhCCCeEE-Eeeec
Confidence 24444432 1 45667777888888888764 44444
|
| >3tp4_A Computational design of enzyme; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.98A {Synthetic construct} PDB: 2x2y_A 2bvy_A 2bvt_A | Back alignment and structure |
|---|
Probab=94.58 E-value=0.54 Score=49.24 Aligned_cols=207 Identities=14% Similarity=0.085 Sum_probs=109.0
Q ss_pred chHHHHHHHHHHHHHcCCEEEEecCCC-CCC-CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH---HhCCCC----cE
Q 046395 218 GSLQALDNAFRWAQKYGMKVIVDLHAL-RVS-QNGSPHSGSRDGFQEWSDSDIQETVAIIDFLAS---RYADHP----SL 288 (535)
Q Consensus 218 ~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~-~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~---ry~~~p----~V 288 (535)
..++.+++.+.++.++|=-|-+.+|.. |.. .+-++.+........=.......+..+++.||+ .+++.. -|
T Consensus 89 ~~~~~i~~~i~~~~~rGGIvTlsWH~~np~tg~~~~dts~~~~~~ilpGg~~~~~y~~~l~~iA~~l~~Lk~~~g~gvPV 168 (475)
T 3tp4_A 89 ENIALFADYIRKADAIGGVNTVGAGVENFVTGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGTLIPI 168 (475)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEEESGGGSTTSTTCC---CHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSCBCCE
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEeCCCCCCCCCCcccCCHHHHHHhcCCCchhHHHHHHHHHHHHHHHhhccccCCCceE
Confidence 356788888999999999999999964 211 010111100000000000112345555555554 565421 24
Q ss_pred EEEEeecCCCCCCC-------ChHHHHHHHHHHHHHHHhc-CCCcE-EEEcCC--CCCChhhhhcc-cCCCCcEEEEEee
Q 046395 289 VAIELMNEPKAPDL-------KLDSLKTYYKAGYDTVRKY-SSSAY-VILSNR--LGGEWSELLSF-ASNLSRVVIDVHF 356 (535)
Q Consensus 289 ~~~el~NEP~~~~~-------~~~~~~~~~~~~~~aIR~~-~p~~~-ii~~~~--~g~~~~~~~~~-~~~~~n~v~d~H~ 356 (535)
+ |-.+-|..+.-. +++.+++.++.+++++|+. +.+.+ .+++.. ++.+...+... |..+--.++.+-.
T Consensus 169 l-~Rp~HEmnG~WfwWg~~~~~p~~yk~lwr~v~d~~r~~~g~~Nliwvwspn~~~~~~~~~~~~~YPGDdyVDiVG~D~ 247 (475)
T 3tp4_A 169 V-FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLGLDT 247 (475)
T ss_dssp E-EEEEECCCSSSCCCHHHHHSHHHHHHHHHHHHHHHHHTTCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEECCEE
T ss_pred E-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCccchhhcCCCCCeEEEEEEec
Confidence 4 889999986421 3578999999999999964 43444 344432 22233344333 3333445677777
Q ss_pred cCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC--CCCCHHHHHHHHHHHHHHHhhC----Cc
Q 046395 357 YNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA--EGASKRDYQRFAEAQLDVYGRA----TF 430 (535)
Q Consensus 357 Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~--~~~~~~~~~~~~~~ql~~~~~~----~~ 430 (535)
|.... .+...+.+.. ....+..+.+..++|+.|+|||...+. .+... ..|+...++.+.+. .+
T Consensus 248 Y~~~~-------~~~f~~~~~~-~l~~l~~~A~~~gKpiaItE~G~~~~~~~~G~~d---a~W~t~~l~~i~~~P~v~~i 316 (475)
T 3tp4_A 248 YDSTG-------SDAFLAGLVA-DLRMIAEIADEKGKVSAFTRFGVSGGVGTNGSSP---AQWFTKVLAAIKADPVASRN 316 (475)
T ss_dssp EESSC-------CHHHHHHHHH-HHHHHHHHHHHHTCEECBCEEEETTCSSTTSCCC---TTHHHHHHHHHHTCTTTTCC
T ss_pred cCCCC-------chhHHHHHHH-HHHHHHHHHhhCCCcEEEEeeccCCCcccCCCch---HHHHHHHHHHHHhCccccee
Confidence 75421 1111111111 222344444445667999999987521 11111 24555566777654 46
Q ss_pred ceE-EEe
Q 046395 431 GWA-YWA 436 (535)
Q Consensus 431 Gw~-~W~ 436 (535)
.|+ +|.
T Consensus 317 aYvl~Wr 323 (475)
T 3tp4_A 317 AYMETGE 323 (475)
T ss_dssp CEEEECC
T ss_pred EEEEEEc
Confidence 665 565
|
| >2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=94.49 E-value=0.25 Score=52.03 Aligned_cols=131 Identities=19% Similarity=0.262 Sum_probs=77.4
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC-
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ- 248 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~- 248 (535)
+.++.||++|+|+|=| ||. .. +.. ..|+ -+..+.|+++|+.|+++||+||+|+ |......
T Consensus 54 ~~LdyL~~LGv~~I~l~Pi~-~~---~~~-~gY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~V~NH~~~~~~~ 128 (475)
T 2z1k_A 54 EKLPYLLDLGVEAIYLNPVF-AS---TAN-HRYHTVDYFQVDPILGGNEALRHLLEVAHAHGVRVILDGVFNHTGRGFFA 128 (475)
T ss_dssp HTHHHHHHHTCCEEEECCCE-EE---SST-TCCSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHH
T ss_pred HHhHHHHHcCCCEEEECCCc-CC---CCC-CCcCCCCcCccCcccCCHHHHHHHHHHHHHCCCEEEEEEecccccCCCHH
Confidence 5688999999999998 342 11 100 0121 1468999999999999999999999 5432110
Q ss_pred ----------CC---CCC-CC-C------CCCC-----------CCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeec
Q 046395 249 ----------NG---SPH-SG-S------RDGF-----------QEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMN 295 (535)
Q Consensus 249 ----------ng---~~~-sg-~------~~~~-----------~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~N 295 (535)
+. |-+ .+ . ...+ ..+. ++.++...+.++..+ .|+=+ .+ -++..+
T Consensus 129 f~~~~~~g~~s~y~~~y~~~~~~~~~~~~~~~y~~~~~~~~~pdln~~np~v~~~i~~~~~~w~-~~gvD-Gf-R~D~~~ 205 (475)
T 2z1k_A 129 FQHLMENGEQSPYRDWYHVKGFPLKAYTAHPNYEAWWGNPELPKLKVETPAVREYLLAVAEHWI-RFGVD-GW-RLDVPN 205 (475)
T ss_dssp HHHHHHHGGGCTTGGGBCBCSSSCCTTSSSCSBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTCC-EE-EESSGG
T ss_pred HHHHHhcCCCCCCcceeecCCCCCcCCCCCCCccccCCCCCcCccccCCHHHHHHHHHHHHHHH-HCCCC-EE-eecccc
Confidence 00 000 00 0 0011 1122 667777888888777 55321 22 255555
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 296 EPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 296 EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
+... . .+.+++.+.+++..|+.+++-+
T Consensus 206 ~~~~-----~---~~~~~~~~~~~~~~p~~~~igE 232 (475)
T 2z1k_A 206 EIPD-----P---TFWREFRQRVKGANPEAYIVGE 232 (475)
T ss_dssp GCCC-----H---HHHHHHHHHHHHHCTTCEEEEC
T ss_pred cCCH-----H---HHHHHHHHHHhhcCCCcEEEEE
Confidence 5431 1 3677777888888888765543
|
| >1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.53 Score=45.78 Aligned_cols=109 Identities=17% Similarity=0.227 Sum_probs=79.0
Q ss_pred ceeEEEEeecCcEEEEecCCCceEEeccCCC--CCCCC--ceeEEEEec---CCeEEEEe-eCCcEEEeecCCC---eEE
Q 046395 18 TQVQLISTKLKKYLTAENGSETILMANHNSS--STSSW--QTFRLWRIN---ETFYNFRL-SNKQFIGLENQGN---KLV 86 (535)
Q Consensus 18 ~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~--~~~~w--e~f~~~~~~---~~~~~~~~-~~~~~v~~~~~~~---~~~ 86 (535)
..|.+||.-+|||...-.+.+.-|||+++.+ .++.| --||+.++. .+++.|+. ..|+|+.-...++ ...
T Consensus 55 g~vhIR~~~n~kyW~R~~~~~~wIvA~~~ep~ed~d~~~ctlFkp~~v~~~~~~~~~f~~vq~g~~~~~~~~~~~~~g~~ 134 (303)
T 1jlx_A 55 GLVHIKSRYTNKYLVRWSPNHYWITASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVGGSFVSYL 134 (303)
T ss_dssp TCEEEEETTTCCEEEESSTTCCBEEEEESSCCCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEECCSTTCCSEE
T ss_pred CEEEEEecCCCceeeecCCCCceEEecCCCCCcccCcccccceEEEEeccCCCceEEEEEEecCceEEeeecCCceeeEE
Confidence 5699999999999999777778999998765 23454 369999995 68999995 5999998875332 356
Q ss_pred EeccCC---CCCCceEEEecCC---CCc-eeEEEecCCceEEEeccc
Q 046395 87 AVSATE---KFPEPFQITRKNG---EPH-RVRFRASNGYFLQAKSEM 126 (535)
Q Consensus 87 a~~~~~---~~~e~f~~~~~~~---~~~-~v~I~~~nG~flq~~~~~ 126 (535)
+...++ +.-+.|.++--.. =+. .|.+|..||+||.+....
T Consensus 135 ~~~~~~~~~~~~d~ftv~d~~~~~~LPk~~v~fKGdNgkYL~~~~~~ 181 (303)
T 1jlx_A 135 FAESSQIDTGSKDVFHVIDWKSIFQFPKGYVTFKGNNGKYLGVITIN 181 (303)
T ss_dssp ECCCSSCCTTCTTCEEEEESGGGGCCCCSSEEEECTTSCEEEEEEET
T ss_pred EEcccccccccCCcEEEEchhhhhhCcceeEEEEcCCCcEEEEEEcC
Confidence 666666 4455677543310 012 688999999999887553
|
| >2wan_A Pullulanase; hydrolase, glycoside hydrolase, polysaccharide, amylase, starch, carbohydrate; 1.65A {Bacillus acidopullulyticus} | Back alignment and structure |
|---|
Probab=94.35 E-value=0.46 Score=54.51 Aligned_cols=136 Identities=12% Similarity=0.125 Sum_probs=79.2
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccC-C---CCCCCCcc---------------c--hHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYD-P---KPPKPFVG---------------G--SLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~-p---~~~~~~~~---------------~--~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.||++|+|+|=| ||.-....+ . .....|+. + ..+.|+++|+.|+++||+||||+
T Consensus 473 ~~LdyLk~LGvtaI~L~Pi~e~~~~de~~~~~~~wGYd~~dy~ap~~~y~~dp~Gt~~~~dfk~LV~~aH~~GI~VILDv 552 (921)
T 2wan_A 473 TGIDSLKELGITTVQLQPVEEFNSIDETQPDTYNWGYDPRNYNVPEGAYATTPEGTARITELKQLIQSLHQQRIGVNMDV 552 (921)
T ss_dssp CHHHHHHHHTCCEEEESCCEEESSSCTTSTTSCCCCCSEEEEEEECGGGSSCSSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hhhHHHHHcCCCEEEeCCccccCcccccccCcCCcCCCCcCCCCCCcccccCCCCCccHHHHHHHHHHHHHcCCEEEEEE
Confidence 3489999999999997 443211000 0 00000110 1 17999999999999999999999
Q ss_pred ---CCCCCCC-------CCCCC----CCCCCC------CCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC
Q 046395 242 ---HALRVSQ-------NGSPH----SGSRDG------FQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP 300 (535)
Q Consensus 242 ---H~~pg~~-------ng~~~----sg~~~~------~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~ 300 (535)
|..+.+. ..+.+ .|.... ...+. ++.++..++.++..++.|+=+ .+ -+++...-
T Consensus 553 V~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~~~~g~~~dln~~~p~Vr~~i~d~l~~Wl~e~gVD-Gf-R~Da~~~~--- 627 (921)
T 2wan_A 553 VYNHTFDVMVSDFDKIVPQYYYRTDSNGNYTNGSGCGNEFATEHPMAQKFVLDSVNYWVNEYHVD-GF-RFDLMALL--- 627 (921)
T ss_dssp CTTCCSCSSSSHHHHHSTTTTBCBCTTSCBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCC-EE-EETTGGGG---
T ss_pred ccccccccccccccCCCCCeEEEcCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHcCCC-EE-Eecccccc---
Confidence 5443321 11111 010000 01122 677888888888888777432 22 24445432
Q ss_pred CCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 301 DLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 301 ~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
. ..+++++.+++++.+|+.+++-+
T Consensus 628 --~----~~~~~~~~~~l~~~~p~~~ligE 651 (921)
T 2wan_A 628 --G----KDTMAKISNELHAINPGIVLYGE 651 (921)
T ss_dssp --C----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --C----HHHHHHHHHHHHHhCCceEEEEe
Confidence 1 34667778888888998765543
|
| >3aml_A OS06G0726400 protein; starch-branching, transferase; HET: EPE; 1.70A {Oryza sativa japonica group} PDB: 3amk_A | Back alignment and structure |
|---|
Probab=94.25 E-value=0.39 Score=53.86 Aligned_cols=144 Identities=17% Similarity=0.242 Sum_probs=80.7
Q ss_pred HHHHHHHHHcCCCEEEe-CCcccc-----ccCCCCC---CCCccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC--
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWI-----AYDPKPP---KPFVGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ-- 248 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~-----~~~p~~~---~~~~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~-- 248 (535)
++-++.|+++|+|+|=| ||.-.. ..++... .+ .-+..+.|+++|+.|.++||+||||+ |......
T Consensus 205 ~~~L~yLk~LGvt~I~L~Pi~e~~~~~~~GY~~~dy~a~~~-~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~g 283 (755)
T 3aml_A 205 DNVLPRIRANNYNTVQLMAIMEHSYYASFGYHVTNFFAVSS-RSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDG 283 (755)
T ss_dssp HHTHHHHHHTTCCEEEEESCEECSCGGGTTCSCSEEEEECG-GGCCHHHHHHHHHHHHHTTCEEEEEECCSCBCCCTTTS
T ss_pred HHHHHHHHHcCCCEEEECchhcCCCCCCCCCccCCCCccCC-CCCCHHHHHHHHHHHHHCCCEEEEEEeccccccccccc
Confidence 44589999999999997 332100 0111100 00 01468999999999999999999999 4332211
Q ss_pred -CCCC----------CCCCCCCCCCC-------C-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeec--------------
Q 046395 249 -NGSP----------HSGSRDGFQEW-------S-DSDIQETVAIIDFLASRYADHPSLVAIELMN-------------- 295 (535)
Q Consensus 249 -ng~~----------~sg~~~~~~~W-------~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~N-------------- 295 (535)
++++ +.+.......| . ++.++..++.++..++.|+=+- +-++...
T Consensus 284 ~~~fd~~~~~~~~yf~~~~~g~~~~w~~~~lN~~~p~V~~~l~~~l~~Wl~e~gvDG--fR~Dav~~m~~~~~g~~~~f~ 361 (755)
T 3aml_A 284 LNGYDVGQNTHESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDG--FRFDGVTSMLYHHHGINKGFT 361 (755)
T ss_dssp GGGGCSSCCGGGSSBCCGGGGEETTTTEECBCTTSHHHHHHHHHHHHHHHHHHCCCE--EEETTHHHHHBTTTTTTCCCC
T ss_pred hhccccCCCCCcceeecCCCCccCCCCCceeccCCHHHHHHHHHHHHHHHHHcCCCE--EEecchhhhhhcccCcccccc
Confidence 1111 10000001122 2 6777888888888887664321 1122221
Q ss_pred ----CCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 296 ----EPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 296 ----EP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
|-.....+.+. ..|++.+.+++++..|+.+++-+
T Consensus 362 ~~~~~~~~~~~~~~a-i~fl~~~~~~v~~~~p~~~lIaE 399 (755)
T 3aml_A 362 GNYKEYFSLDTDVDA-IVYMMLANHLMHKLLPEATIVAE 399 (755)
T ss_dssp SCGGGTSSTTBCHHH-HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred cccccccccccchhH-HHHHHHHHHHHHHHCCCeEEEEE
Confidence 11110112223 36788888899999998876654
|
| >3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A* | Back alignment and structure |
|---|
Probab=94.05 E-value=0.5 Score=53.78 Aligned_cols=99 Identities=18% Similarity=0.234 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHcCCEEEEec---CCCCCC-----CCCCCCCCCCCCC---------C-CCChHHHHHHHHHHHHHHHH
Q 046395 220 LQALDNAFRWAQKYGMKVIVDL---HALRVS-----QNGSPHSGSRDGF---------Q-EWSDSDIQETVAIIDFLASR 281 (535)
Q Consensus 220 l~~ld~~i~~a~~~Gi~VIldl---H~~pg~-----~ng~~~sg~~~~~---------~-~W~~~~~~~~~~~~~~la~r 281 (535)
++.|+++|+.|+++||+||||+ |..+++ ...+.+....++. . ...+..++..++.++..++.
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~a~~~~~~~~~p~yy~~~~~dg~~~~~~~g~~ln~~~p~Vr~~i~d~l~~Wv~e 448 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHTAKTYLFEDIEPNYYHFMNEDGSPRESFGGGRLGTTHAMSRRVLVDSIKYLTSE 448 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCSCTHHHHTTSTTTSBCBCTTSCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccccCccccccCCCceeeeeCCCCCeeccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 7999999999999999999998 544321 1111110001111 1 11267788888889988888
Q ss_pred hCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 282 YADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 282 y~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
|+=+ -+-+++.-. .+ ..+++.++..+|+.+|+.+++-
T Consensus 449 ~gVD--GFRfD~a~~-----~~----~~~~~~~~~~~~~~~P~~~lig 485 (877)
T 3faw_A 449 FKVD--GFRFDMMGD-----HD----AAAIELAYKEAKAINPNMIMIG 485 (877)
T ss_dssp HCCC--EEEETTGGG-----SB----HHHHHHHHHHHHHHCTTCEEEE
T ss_pred cCCc--EEEEecCCc-----CC----HHHHHHHHHHHHhhCCCcEEEE
Confidence 7431 122444321 12 3456677888899999766443
|
| >3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=94.04 E-value=0.49 Score=49.43 Aligned_cols=131 Identities=15% Similarity=0.203 Sum_probs=74.1
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCC---CCCCc----------cchHHHHHHHHHHHHHcCCEEEEec---CCCC
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKP---PKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL---HALR 245 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~---~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl---H~~p 245 (535)
.+.++.|+++|+++|=| |+. ........ +..|. -+..+.|+++|+.|.++||+||+|+ |..+
T Consensus 33 ~~~l~yl~~lG~~~i~l~Pi~-~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~Gi~vi~D~V~NH~~~ 111 (449)
T 3dhu_A 33 TADLQRIKDLGTDILWLLPIN-PIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHELGMKVMLDIVYNHTSP 111 (449)
T ss_dssp HTTHHHHHHHTCSEEEECCCS-CBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHTTCEEEEEECCSEECT
T ss_pred HHhHHHHHHcCCCEEEECCcc-cccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEEccCcCcC
Confidence 35678999999999998 332 11111000 00121 1467999999999999999999999 4332
Q ss_pred CCC----C-CCCC---CCCC-CCCCCCC---------hHHHHHHHHHHHHHHHHhCCCCcEEEEEe--ecCCCCCCCChH
Q 046395 246 VSQ----N-GSPH---SGSR-DGFQEWS---------DSDIQETVAIIDFLASRYADHPSLVAIEL--MNEPKAPDLKLD 305 (535)
Q Consensus 246 g~~----n-g~~~---sg~~-~~~~~W~---------~~~~~~~~~~~~~la~ry~~~p~V~~~el--~NEP~~~~~~~~ 305 (535)
.+. . .+-. .+.. .....|. ++.++..+++++...+. |-||=+ ..+.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~dLn~~np~Vr~~l~~~l~~w~~~------vDGfRlDaa~~~-------- 177 (449)
T 3dhu_A 112 DSVLATEHPEWFYHDADGQLTNKVGDWSDVKDLDYGHHELWQYQIDTLLYWSQF------VDGYRCDVAPLV-------- 177 (449)
T ss_dssp TSHHHHHCGGGBCBCTTSCBCCSSTTCTTCEEBCTTSHHHHHHHHHHHHHHTTT------CSEEEETTGGGS--------
T ss_pred ccchhhcCccceEECCCCCcCCCCCCCCCCCccCCCCHHHHHHHHHHHHHHHHh------CCEEEEEChhhC--------
Confidence 110 0 0100 0100 0112232 55566666666655543 444443 2221
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 306 SLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 306 ~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
...+.+++.+.+++..|+.+++-
T Consensus 178 -~~~f~~~~~~~~~~~~p~~~~~g 200 (449)
T 3dhu_A 178 -PLDFWLEARKQVNAKYPETLWLA 200 (449)
T ss_dssp -CHHHHHHHHHHHHHHSTTCEEEE
T ss_pred -CHHHHHHHHHHHHhhCCCeEEEe
Confidence 24567778888888899877543
|
| >2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A* | Back alignment and structure |
|---|
Probab=93.88 E-value=0.52 Score=52.56 Aligned_cols=136 Identities=13% Similarity=0.212 Sum_probs=78.9
Q ss_pred HHHHHHHHcCCCEEEe-CCccccc-------------cCCC----CCCCCcc------chHHHHHHHHHHHHHcCCEEEE
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIA-------------YDPK----PPKPFVG------GSLQALDNAFRWAQKYGMKVIV 239 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~-------------~~p~----~~~~~~~------~~l~~ld~~i~~a~~~Gi~VIl 239 (535)
+-++.||++|+|+|=| ||.-... .++. +...|-. +..+.|+++|+.|+++||+|||
T Consensus 255 ~~LdyLk~LGvtaI~L~Pi~~~~~~de~~~~~~~~wGYd~~dy~a~~~~yg~~p~~g~~~~~dfk~LV~~aH~~GI~VIl 334 (718)
T 2e8y_A 255 SGLAYVKELGVTHVELLPVNDFAGVDEEKPLDAYNWGYNPLHFFAPEGSYASNPHDPQTRKTELKQMINTLHQHGLRVIL 334 (718)
T ss_dssp CHHHHHHHHTCSEEEESCCEEESSSCTTSGGGCCCCCCSEEEEEEECSTTSSCSSSHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hhhHHHHHcCCCEEEECCccccCccccccccccCcCCCCccCCCCcCcccccCCCCccccHHHHHHHHHHHHHCCCEEEE
Confidence 3699999999999997 5531000 0100 0000111 1379999999999999999999
Q ss_pred ec---CCCCCCC-------CCCCC----CCCCCC------CCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 240 DL---HALRVSQ-------NGSPH----SGSRDG------FQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 240 dl---H~~pg~~-------ng~~~----sg~~~~------~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
|+ |..+... ..+.+ .|.... ...|. ++.++...+.++..++.|+=+ .+ -+++.....
T Consensus 335 DvV~NHt~~~~~~~f~~~~p~y~~~~~~~g~~~n~~~~g~dln~~np~Vr~~i~d~~~~Wl~e~gVD-Gf-R~D~~~~~~ 412 (718)
T 2e8y_A 335 DVVFNHVYKRENSPFEKTVPGYFFRHDECGKPSNGTGVGNDIASERRMARKFIADCVVYWLEEYNVD-GF-RFDLLGILD 412 (718)
T ss_dssp EECTTCCSSGGGSHHHHHSTTTSBCBCTTSSBCCTTSSSCCBCTTSHHHHHHHHHHHHHHHHHHCCC-EE-EETTGGGSB
T ss_pred EEecccccCcccccccccCCCeEEecCCCCcccCCCCcccccccCCHHHHHHHHHHHHHHHHHhCCC-EE-EEeccccCC
Confidence 99 5433221 11110 011100 11222 677888888888888877432 22 245554321
Q ss_pred CCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
..+++++.+++++.+|+.+++-+
T Consensus 413 ---------~~~~~~~~~~~~~~~p~~~ligE 435 (718)
T 2e8y_A 413 ---------IDTVLYMKEKATKAKPGILLFGE 435 (718)
T ss_dssp ---------HHHHHHHHHHHHHHSTTCEEEEC
T ss_pred ---------HHHHHHHHHHHHHhCCCeEEEEe
Confidence 34566677788888888765443
|
| >1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A* | Back alignment and structure |
|---|
Probab=93.72 E-value=0.1 Score=54.72 Aligned_cols=58 Identities=22% Similarity=0.530 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCEEEe-CCc-------cccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVG-------WWIAYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~-------~w~~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++-++.|+++|+|+|=| ||. ||...+|.... .++ +..+.|+++|+.|+++||+||||+
T Consensus 18 ~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~-idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 85 (448)
T 1g94_A 18 QECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYE-LQSRGGNRAQFIDMVNRCSAAGVDIYVDT 85 (448)
T ss_dssp HHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSC-SCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccc-cCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 44468999999999998 332 12222222111 111 568999999999999999999998
|
| >2v3g_A Endoglucanase H; beta-1 4 beta-1 3 glucanase, lichenase, hydrolase, glycosidase, glycoside hydrolase family 26; HET: BGC NOY; 1.20A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 2bv9_A 2bvd_A* 2cip_A* 2cit_A* 2vi0_A* | Back alignment and structure |
|---|
Probab=93.59 E-value=1.9 Score=42.25 Aligned_cols=95 Identities=6% Similarity=0.061 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 220 LQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 220 l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
+..+.+.++.+.++|-.++|.+|-..+. -.... .| ++.+...++.+.|.+ + +.| |+ |-+..|..+
T Consensus 48 ~~~~~~~~~~~~~~G~i~~isw~P~~~~--~~~i~---~G------~~d~~i~~~A~~l~~-~-g~p-V~-~R~~hE~nG 112 (283)
T 2v3g_A 48 FSWVRPYADAVYNNGSILMITWEPWEYN--TVDIK---NG------KADAYITRMAQDMKA-Y-GKE-IW-LRPLHEANG 112 (283)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECTTCC--HHHHH---TT------TTHHHHHHHHHHHHH-H-CSC-EE-EEESCCTTS
T ss_pred chHHHHHHHHHHhCCCEEEEEeCCCCCC--HHHhc---CC------chHHHHHHHHHHHHh-c-CCc-EE-EEeccccCC
Confidence 3456677888899999999999932110 00000 01 122222233333332 3 445 54 899999986
Q ss_pred C------C-----CChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 300 P------D-----LKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 300 ~------~-----~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
. . .+++.+++.++.+++++|+.+.+.++++
T Consensus 113 ~Wf~Wg~~~~~~~~~p~~y~~~wr~~~~~~r~~g~~n~~~v 153 (283)
T 2v3g_A 113 DWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWV 153 (283)
T ss_dssp SSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEB
T ss_pred CcccCCCcCCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 3 1 2578999999999999999865555444
|
| >4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ... | Back alignment and structure |
|---|
Probab=93.59 E-value=0.082 Score=55.62 Aligned_cols=58 Identities=22% Similarity=0.526 Sum_probs=42.1
Q ss_pred HHHHHHHHHcCCCEEEeC-C-----------ccccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIP-V-----------GWWIAYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v-----------~~w~~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++-.+.|+++|+++|=|| + +||...+|.... .++ +..+.|+++|+.|+++||+||+|+
T Consensus 26 ~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~~dy~-i~~~~Gt~~df~~lv~~aH~~Gi~VilD~ 97 (496)
T 4gqr_A 26 LECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQPVSYK-LCTRSGNEDEFRNMVTRCNNVGVRIYVDA 97 (496)
T ss_dssp HHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSC-SCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCccCce-eCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 444567999999999994 3 134444443211 111 578999999999999999999999
|
| >2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A* | Back alignment and structure |
|---|
Probab=93.42 E-value=1 Score=50.07 Aligned_cols=99 Identities=17% Similarity=0.307 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHHHcCCEEEEec---CCCCCC-----CCCCCCCCCCCCC--CCC--------ChHHHHHHHHHHHHHHHH
Q 046395 220 LQALDNAFRWAQKYGMKVIVDL---HALRVS-----QNGSPHSGSRDGF--QEW--------SDSDIQETVAIIDFLASR 281 (535)
Q Consensus 220 l~~ld~~i~~a~~~Gi~VIldl---H~~pg~-----~ng~~~sg~~~~~--~~W--------~~~~~~~~~~~~~~la~r 281 (535)
.+.|+++|+.|+++||+||||+ |..+++ ...+.+....++. ..| .+..++..++.++..++.
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~v~~~i~d~l~~W~~e 333 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 333 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCSCHHHHHTTSTTTSBCBCTTCCBCEETTEEBBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccCcccccccCCCeeEEeCCCCCCccccCCCCcccCCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999999998 443321 0111110000111 011 156677788888888887
Q ss_pred hCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 282 YADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 282 y~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
|+=+ .+ -+++..+. +. .+++++...+++.+|+.+++-
T Consensus 334 ~~vD-Gf-R~D~~~~~-----~~----~~~~~~~~~~~~~~p~~~lig 370 (714)
T 2ya0_A 334 YKVD-GF-RFDMMGDH-----DA----ASIEEAYKAARALNPNLIMLG 370 (714)
T ss_dssp HCCC-EE-EETTGGGS-----BH----HHHHHHHHHHHHHCTTCEEEE
T ss_pred hCce-EE-EEeCCCCC-----CH----HHHHHHHHHHHHhCCCeEEEe
Confidence 7432 22 24444321 22 345566778888899876553
|
| >1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A* | Back alignment and structure |
|---|
Probab=93.31 E-value=1.6 Score=47.61 Aligned_cols=145 Identities=14% Similarity=0.180 Sum_probs=80.5
Q ss_pred HHHHHHHHHcCCCEEEe-CCcccc-----ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWI-----AYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQNGS 251 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~-----~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ng~ 251 (535)
++-++.||++|+|+|=| ||.-.. ..++......+ -+..+.|+++|+.|.++||+||||+ |..+.. .++
T Consensus 159 ~~ll~yl~~lGv~~i~l~Pi~~~~~~~~~GY~~~~y~~~~~~~Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~-~~~ 237 (617)
T 1m7x_A 159 DQLVPYAKWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTDD-FAL 237 (617)
T ss_dssp HHHHHHHHHTTCSEEEESCCEECSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCST-TSS
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccCCccCccCCCHHHHHHHHHHHHHCCCEEEEEEecCcccCcc-chh
Confidence 44459999999999998 553110 01110000000 1468999999999999999999998 442221 111
Q ss_pred CC---------CCCCCC-CCCC-------C-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecC---------C-----CC
Q 046395 252 PH---------SGSRDG-FQEW-------S-DSDIQETVAIIDFLASRYADHPSLVAIELMNE---------P-----KA 299 (535)
Q Consensus 252 ~~---------sg~~~~-~~~W-------~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NE---------P-----~~ 299 (535)
.. .....+ ...| . ++.++..++.++..+++|+=+- + -++.... + ..
T Consensus 238 ~~~d~~~~y~~~~~~~g~~~~w~~~~ln~~~p~v~~~i~~~~~~W~~~~gvDG-f-R~D~~~~~~~~d~~~~~g~~~~~~ 315 (617)
T 1m7x_A 238 AEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDA-L-RVDAVASMIYRDYSRKEGEWIPNE 315 (617)
T ss_dssp TTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCE-E-EECCSHHHHCC-------------
T ss_pred hhcCCCccccccCcccCCcCCCCCceecCCCHHHHHHHHHHHHHHHHHhCcCE-E-EEcchhhhhhcccccccccccccc
Confidence 10 000001 1122 2 6778888888888888874321 1 1222111 0 00
Q ss_pred C-CCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 300 P-DLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 300 ~-~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
. ......-..+++++.+.|++..|+.+++-+
T Consensus 316 ~~~~~~~~~~~fl~~~~~~v~~~~p~~~~iaE 347 (617)
T 1m7x_A 316 FGGRENLEAIEFLRNTNRILGEQVSGAVTMAE 347 (617)
T ss_dssp -CTTCCHHHHHHHHHHHHHHHHSSTTCEEEEC
T ss_pred ccccCCchHHHHHHHHHHHHHHHCCCeEEEEe
Confidence 0 011123467899999999999998776654
|
| >4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm} | Back alignment and structure |
|---|
Probab=92.67 E-value=0.17 Score=54.25 Aligned_cols=54 Identities=20% Similarity=0.446 Sum_probs=39.4
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.||++|+|+|=| ||.- .|.....|+ -+..+.|+++|+.|.++||+||||+
T Consensus 36 ~kLdYLk~LGvt~I~L~Pi~~----~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 100 (549)
T 4aie_A 36 SRLDYLEKLGIDAIWLSPVYQ----SPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEHHIKIVMDL 100 (549)
T ss_dssp TTHHHHHHHTCSEEEECCCEE----CCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHCCCCEEEeCCCcC----CCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3478999999999997 4421 111001121 1468999999999999999999999
|
| >1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A | Back alignment and structure |
|---|
Probab=92.38 E-value=1.6 Score=42.51 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=78.4
Q ss_pred ceeEEEEeecCcEEE--Ee--cCCCceEEeccCCCCCCCCceeEEEEe--cCCeEEEEee-CCcEEEeecC-CCeEEEec
Q 046395 18 TQVQLISTKLKKYLT--AE--NGSETILMANHNSSSTSSWQTFRLWRI--NETFYNFRLS-NKQFIGLENQ-GNKLVAVS 89 (535)
Q Consensus 18 ~~~~~~~~~~~~~~~--a~--~~g~~~~~anr~~~~~~~we~f~~~~~--~~~~~~~~~~-~~~~v~~~~~-~~~~~a~~ 89 (535)
.-|.|||=-+||||- .| .-+| -|.-+-..+ +++--+|++-.. +++.|-+|+. ||+|..--++ +.=|+|.+
T Consensus 5 r~~~lKs~~~~kYL~~~~d~~~~~G-~l~f~~~~~-~sp~t~~eve~~k~~~g~vhIR~~~n~kyW~R~~~~~~wIvA~~ 82 (303)
T 1jlx_A 5 VIMCLKSNNHQKYLRYQSDNIQQYG-LLQFSADKI-LDPLAQFEVEPSKTYDGLVHIKSRYTNKYLVRWSPNHYWITASA 82 (303)
T ss_dssp SEEEEEETTTTEEEEECCSSSTTTT-BEEEEESST-TCTTCCEEEEECSSSTTCEEEEETTTCCEEEESSTTCCBEEEEE
T ss_pred eEEEEeecCccceeEEecccccccc-EEEEcCccC-CCCcccEEEEEeecCCCEEEEEecCCCceeeecCCCCceEEecC
Confidence 358899988899985 33 2223 577777772 389999999994 4699999987 9999998432 44599999
Q ss_pred cCCCC------CCceEEEec-CCCCceeEEEecC-CceEEEe
Q 046395 90 ATEKF------PEPFQITRK-NGEPHRVRFRASN-GYFLQAK 123 (535)
Q Consensus 90 ~~~~~------~e~f~~~~~-~~~~~~v~I~~~n-G~flq~~ 123 (535)
+.|.. .-.|+.++- +++.+.++++... |.||+-.
T Consensus 83 ~ep~ed~d~~~ctlFkp~~v~~~~~~~~~f~~vq~g~~~~~~ 124 (303)
T 1jlx_A 83 NEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNY 124 (303)
T ss_dssp SSCCCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEE
T ss_pred CCCCcccCcccccceEEEEeccCCCceEEEEEEecCceEEee
Confidence 98865 346998886 4557889998865 8888664
|
| >1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A* | Back alignment and structure |
|---|
Probab=92.37 E-value=0.24 Score=53.08 Aligned_cols=58 Identities=21% Similarity=0.192 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccC-----CCC---C---CCCc--c--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYD-----PKP---P---KPFV--G--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~-----p~~---~---~~~~--~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.||++|+|+|=| |+. ..... +.+ | ...+ + +..+.|+++|+.|+++||+||+|+
T Consensus 40 ~~~LdyLk~LGvt~IwL~Pi~-e~~~~~~~~~~~~~~~GY~~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~VilD~ 113 (527)
T 1gcy_A 40 RQQAATIAADGFSAIWMPVPW-RDFSSWSDGSKSGGGEGYFWHDFNKNGRYGSDAQLRQAASALGGAGVKVLYDV 113 (527)
T ss_dssp HHHHHHHHHTTCSEEEECCCS-CCCCCBC---CCBCCSSTTCSSSCSCSSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCCcc-ccccccccCCCCCCCCCcccccCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 45689999999999998 443 00000 100 0 0012 2 468999999999999999999998
|
| >2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=92.29 E-value=1.6 Score=50.65 Aligned_cols=99 Identities=17% Similarity=0.307 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHHHcCCEEEEec---CCCCCC-----CCCCCCCCCCCCC--CCC--------ChHHHHHHHHHHHHHHHH
Q 046395 220 LQALDNAFRWAQKYGMKVIVDL---HALRVS-----QNGSPHSGSRDGF--QEW--------SDSDIQETVAIIDFLASR 281 (535)
Q Consensus 220 l~~ld~~i~~a~~~Gi~VIldl---H~~pg~-----~ng~~~sg~~~~~--~~W--------~~~~~~~~~~~~~~la~r 281 (535)
.+.|+++|+.|+++||+||||+ |..+++ ...+.+....++. ..| .+..++..++.++..++.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~~~~~~~~~~~~yy~~~~~~g~~~~~~~~~~l~~~~~~vr~~i~d~l~~W~~e 640 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTAKVDLFEDLEPNYYHFMDADGTPRTSFGGGRLGTTHHMTKRLLIDSIKYLVDT 640 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCSCHHHHHTTSTTTSBCBCTTCCBCEETTEECBCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccccccccccCCCCeeEEeCCCCCcccCCCCCCcCcCCHHHHHHHHHHHHHHHHh
Confidence 7999999999999999999998 543321 0111110000110 011 156777788888888887
Q ss_pred hCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 282 YADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 282 y~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
|+=+ .+ -++++.+. +. .+++++..++++.+|+.+++-
T Consensus 641 ~gvD-Gf-R~D~~~~~-----~~----~~~~~~~~~~~~~~p~~~lig 677 (1014)
T 2ya1_A 641 YKVD-GF-RFDMMGDH-----DA----ASIEEAYKAARALNPNLIMLG 677 (1014)
T ss_dssp HCCC-EE-EETTGGGS-----BH----HHHHHHHHHHHHHCTTCEEEE
T ss_pred cCce-EE-EEeCCCCC-----CH----HHHHHHHHHHHHhCCCeEEEE
Confidence 7432 12 24444321 22 345567778888899877554
|
| >1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A* | Back alignment and structure |
|---|
Probab=91.97 E-value=0.21 Score=52.25 Aligned_cols=58 Identities=24% Similarity=0.334 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCCEEEe-CCccc---cccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWW---IAYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w---~~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.||++|+|+|=| ||.-- ...++......+ -+..+.|+++|+.|+++||+||+|+
T Consensus 27 ~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 90 (441)
T 1lwj_A 27 NAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDL 90 (441)
T ss_dssp HTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 5588999999999998 34210 000110000001 1468999999999999999999999
|
| >3q62_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; structural genomics, center for structural genomics of infec diseases, csgid; HET: MES; 1.40A {Yersinia pseudotuberculosis} SCOP: d.38.1.2 PDB: 1mka_A* 1mkb_A | Back alignment and structure |
|---|
Probab=91.55 E-value=0.038 Score=50.52 Aligned_cols=17 Identities=0% Similarity=-0.121 Sum_probs=15.8
Q ss_pred ceEEEecCCccCCccccC
Q 046395 510 REDGIKNLKEFGDDYYRP 527 (535)
Q Consensus 510 ~~~~~k~v~~~~~~~f~~ 527 (535)
+++|+|+|+ .||+||+|
T Consensus 57 ~i~a~k~V~-~de~fF~G 73 (175)
T 3q62_A 57 YVEAELDIN-PDLWFFGC 73 (175)
T ss_dssp EEEEEEECC-TTCHHHHH
T ss_pred EEEEEEEeC-CCCCeecC
Confidence 699999999 99999985
|
| >4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=91.43 E-value=0.23 Score=54.65 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.||++|+|+|=| ||.- .+...+ |+ -+..+.++++|+.|+++||+||||+
T Consensus 243 ~kLdYLk~LGvt~I~L~Pif~----s~~~~G-Yd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~ 306 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPIFS----SLTYHG-YDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDG 306 (645)
T ss_dssp HTHHHHHHHTCCEEEECCCEE----ESSTTC-SSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCC----CCCCCC-cCccCCCccCcccCCHHHHHHHHHHhhhcCCEEEEEe
Confidence 5578999999999998 5421 111111 21 1468999999999999999999999
|
| >3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A* | Back alignment and structure |
|---|
Probab=91.27 E-value=0.99 Score=48.30 Aligned_cols=106 Identities=12% Similarity=0.226 Sum_probs=77.1
Q ss_pred CCceeEEEEeecCcEEEEecCC---CceEEeccCCCCCCCCceeEEEEecCCeEEEEe-eCCcEEEeecC---CC-eEEE
Q 046395 16 DGTQVQLISTKLKKYLTAENGS---ETILMANHNSSSTSSWQTFRLWRINETFYNFRL-SNKQFIGLENQ---GN-KLVA 87 (535)
Q Consensus 16 ~~~~~~~~~~~~~~~~~a~~~g---~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~-~~~~~v~~~~~---~~-~~~a 87 (535)
||+..+|+++..||.|-...++ |+.|+.-.-.. +.-+.|++-..+++.|.|+. ..++.+.+.+. +| .|+-
T Consensus 359 ~~~~y~i~n~~sg~cLdv~~~~~~~G~~v~~~~c~g--~~~Q~W~~~~~g~g~y~i~n~~sg~cLdv~~~~~~~G~~v~~ 436 (526)
T 3vsf_A 359 DTTRYKLVNKNSGKVLDVLDGSVDNAAQIVQWTDNG--SLSQQWYLVDVGGGYKKIVNVKSGRALDVKDESKEDGGVLIQ 436 (526)
T ss_dssp CCCCEEEEETTTCCEEEEGGGCCSTTEEEEEECCCC--CGGGCEEEEECSTTEEEEEESSSCCEEEEGGGCCSTTEEEEE
T ss_pred CCccEEEEECCCCceEEecCCCCCCCcEEEEccCCC--CcceEEEEEECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEE
Confidence 5788999999999999876543 55665544444 56778888888899999995 47888887642 23 3666
Q ss_pred eccCCCCCCceEEEecCCCCceeEEEecC-CceEEEecc
Q 046395 88 VSATEKFPEPFQITRKNGEPHRVRFRASN-GYFLQAKSE 125 (535)
Q Consensus 88 ~~~~~~~~e~f~~~~~~~~~~~v~I~~~n-G~flq~~~~ 125 (535)
.....+..+.|.+....++ ..+|+..+ |+.|.+.+.
T Consensus 437 ~~c~g~~nQ~W~~~~~g~g--~y~i~~~~sg~cLdv~~~ 473 (526)
T 3vsf_A 437 YTSNGGYNQHWKFTDIGDG--YYKISSRHCGKLIDVRKW 473 (526)
T ss_dssp ECCCCCGGGCEEEEEEETT--EEEEEESSSCCEEEEGGG
T ss_pred ecCCCCcccEEEEEECCCC--eEEEEECCCCCEEEeCCC
Confidence 6666778999999987644 46677644 888887644
|
| >4acy_A Endo-alpha-mannosidase; hydrolase, endomannosidase, glycoside hydrolase, CAZY, enzyme-carbohydrate interaction, mannose; HET: MSE; 1.69A {Bacteroides thetaiotaomicron} PDB: 4acz_A 4ad0_A* 4acz_B | Back alignment and structure |
|---|
Probab=91.08 E-value=0.36 Score=49.55 Aligned_cols=78 Identities=17% Similarity=0.206 Sum_probs=55.5
Q ss_pred cchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG 259 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~ 259 (535)
.+.+++|++|++.||+.+=+...+ . +.+.+ +.|..+++.|.++|+++.+++....+
T Consensus 103 ~v~~~hi~~ak~aGIDgfal~w~~--~-----~~~~d----~~l~~~~~aA~~~g~k~~f~~~~y~~------------- 158 (382)
T 4acy_A 103 EIIRKHIRMHIKANVGVLSVTWWG--E-----SDYGN----QSVSLLLDEAAKVGAKVCFHIEPFNG------------- 158 (382)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEECG--G-----GGTTC----HHHHHHHHHHHHHTCEEEEEECCCTT-------------
T ss_pred HHHHHHHHHHHHcCCCEEEEEecC--C-----CCchH----HHHHHHHHHHHHcCCEEEEEeecCCC-------------
Confidence 445899999999999999875432 1 12121 57889999999999999988764321
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhCCCCc
Q 046395 260 FQEWSDSDIQETVAIIDFLASRYADHPS 287 (535)
Q Consensus 260 ~~~W~~~~~~~~~~~~~~la~ry~~~p~ 287 (535)
...+..++-|..|.++|+++|+
T Consensus 159 ------~~~~~~~~dv~~li~~Y~~~pa 180 (382)
T 4acy_A 159 ------RSPQTVRENIQYIVDTYGDHPA 180 (382)
T ss_dssp ------CCHHHHHHHHHHHHHHHTTSTT
T ss_pred ------CChHHHHHHHHHHHHHhcCCCc
Confidence 1234566677778888877664
|
| >2fhf_A Pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, complex with maltotetraose, hydrolase; HET: GLC; 1.65A {Klebsiella aerogenes} SCOP: b.1.18.2 b.1.18.2 b.3.1.3 b.71.1.1 c.1.8.1 PDB: 2fh6_A* 2fh8_A* 2fhb_A* 2fhc_A* 2fgz_A* | Back alignment and structure |
|---|
Probab=91.04 E-value=2.3 Score=49.55 Aligned_cols=99 Identities=12% Similarity=0.154 Sum_probs=60.0
Q ss_pred HHHHHHHHHHHHHc-CCEEEEec---CCCCCCC----C-------CCCCC-CCCCCCC---------CCC-hHHHHHHHH
Q 046395 220 LQALDNAFRWAQKY-GMKVIVDL---HALRVSQ----N-------GSPHS-GSRDGFQ---------EWS-DSDIQETVA 273 (535)
Q Consensus 220 l~~ld~~i~~a~~~-Gi~VIldl---H~~pg~~----n-------g~~~s-g~~~~~~---------~W~-~~~~~~~~~ 273 (535)
.+.|+++|+.|+++ ||+||||+ |..+++. + .+.+. ....+.. .+. +..++..++
T Consensus 581 ~~efk~LV~~~H~~~GI~VILDvV~NHt~~~~~~~~~~~~d~~~p~yy~~~~p~~g~~~~~tg~~dln~~~p~Vr~~i~d 660 (1083)
T 2fhf_A 581 IKEFRTMIQAIKQDLGMNVIMDVVYNHTNAAGPTDRTSVLDKIVPWYYQRLNETTGSVESATCCSDSAPEHRMFAKLIAD 660 (1083)
T ss_dssp HHHHHHHHHHHHHTSCCEEEEEECTTEESCCSSSCTTCCHHHHSTTTSBCBCTTTCCBCCTTSSEEBCTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeccccCcCCCccchhccccCCCCCceeecCCCCCceecCCccCCcCcCCHHHHHHHHH
Confidence 78999999999998 99999999 5433220 0 00000 0001111 112 667777888
Q ss_pred HHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 274 IIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 274 ~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
.++..+++|+=+ . +-+++.+... ..++.++++++++.+|+.+++-
T Consensus 661 ~l~~W~~e~gVD-G-fR~D~a~~~~---------~~~~~~~~~~l~~~~p~~~lig 705 (1083)
T 2fhf_A 661 SLAVWTTDYKID-G-FRFDLMLYHP---------KAQILSAWERIKALNPDIYFFG 705 (1083)
T ss_dssp HHHHHHHHHCCC-E-EEETTGGGSB---------HHHHHHHHHHHHTTCTTCEEEE
T ss_pred HHHHHHHHhCCc-E-EEEeCcccCC---------HHHHHHHHHHHHHhCCCeEEEE
Confidence 888888877432 2 2255554421 3456777788889999776543
|
| >1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A* | Back alignment and structure |
|---|
Probab=90.86 E-value=0.17 Score=53.46 Aligned_cols=58 Identities=26% Similarity=0.535 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCEEEeC-Cc---------cccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIP-VG---------WWIAYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v~---------~w~~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++-++.|+++|+++|=|+ +. ||...++... ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 26 ~~~ldyL~~LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy-~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~ 95 (471)
T 1jae_A 26 DECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSY-IINTRSGDESAFTDMTRRCNDAGVRIYVDA 95 (471)
T ss_dssp HHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCS-CSEETTEEHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCccccccCCCCCCcccccccccc-cccCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 444689999999999983 32 1112222211 0111 469999999999999999999998
|
| >1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A* | Back alignment and structure |
|---|
Probab=90.85 E-value=0.39 Score=49.58 Aligned_cols=58 Identities=17% Similarity=0.266 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc---ccCCCCCCCCc-c--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI---AYDPKPPKPFV-G--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~---~~~p~~~~~~~-~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.|+++|+|+|=| |+.--. ..++......+ + +..+.|+++|+.|+++||+||+|+
T Consensus 25 ~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~ 89 (405)
T 1ht6_A 25 GKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADI 89 (405)
T ss_dssp TTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5578999999999998 342110 11111100011 1 468999999999999999999998
|
| >2vr5_A Glycogen operon protein GLGX; hydrolase, glycosidase, glycosyl hydrolase, glycogen debraching; HET: GLC A16; 2.8A {Sulfolobus solfataricus} PDB: 2vnc_A* 2vuy_A | Back alignment and structure |
|---|
Probab=90.80 E-value=1.2 Score=49.74 Aligned_cols=58 Identities=22% Similarity=0.476 Sum_probs=38.9
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc--------------ccCCCCC----CCCcc-----chHHHHHHHHHHHHHcCCEEEE
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI--------------AYDPKPP----KPFVG-----GSLQALDNAFRWAQKYGMKVIV 239 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~--------------~~~p~~~----~~~~~-----~~l~~ld~~i~~a~~~Gi~VIl 239 (535)
.-++.||++|+|+|=| ||.-.. ..++... ..|-. ...+.|+++|+.|+++||+|||
T Consensus 206 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~yGt~~~~~~~~~dfk~lv~~~H~~Gi~Vil 285 (718)
T 2vr5_A 206 QMISYLKDLGITTVELMPVFHFIDQRFLTDKGLTNYWGYDPINFFSPECRYSSTGCLGGQVLSFKKMVNELHNAGIEVII 285 (718)
T ss_dssp HHHHHHHHHTCCEEEECCCBCBCCCHHHHTTTCCCSSCCCBSCSSSBCGGGCSSCTTTHHHHHHHHHHHHHHTTTCEEEE
T ss_pred hhhHHHHHcCCCeEEEeCCEecCccccccccCCcCccCcCcccCcccChhhcCCCCCCchHHHHHHHHHHHHHCCCEEEE
Confidence 3599999999999997 442110 0111000 00100 1179999999999999999999
Q ss_pred ec
Q 046395 240 DL 241 (535)
Q Consensus 240 dl 241 (535)
|+
T Consensus 286 Dv 287 (718)
T 2vr5_A 286 DV 287 (718)
T ss_dssp EE
T ss_pred Ee
Confidence 98
|
| >1bf2_A Isoamylase; hydrolase, glycosidase, debranching enzyme; 2.00A {Pseudomonas amyloderamosa} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=90.58 E-value=1.3 Score=49.67 Aligned_cols=57 Identities=18% Similarity=0.226 Sum_probs=39.0
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCC----------CCCCCc--------c--ch-------HHHHHHHHHHHHHcCC
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPK----------PPKPFV--------G--GS-------LQALDNAFRWAQKYGM 235 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~----------~~~~~~--------~--~~-------l~~ld~~i~~a~~~Gi 235 (535)
+.+..||++|+|+|=| ||.-. ..+.. ....|+ + +. .+.|+++|+.|+++||
T Consensus 209 ~~l~yLk~LGvt~V~L~Pi~~~-~~~~~~~~~~~~g~~~~wGY~~~dy~~~~~~yGt~~~~~~~~~efk~lV~~~H~~Gi 287 (750)
T 1bf2_A 209 LKASYLASLGVTAVEFLPVQET-QNDANDVVPNSDANQNYWGYMTENYFSPDRRYAYNKAAGGPTAEFQAMVQAFHNAGI 287 (750)
T ss_dssp HTHHHHHHHTCCEEEESCCBCB-SCTTTTSSTTCCTTCCCSCCCBSCSSCBCGGGCSCCSTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEECCcccC-ccccccccccccccccccCcCcccccccCccccCCCCCccHHHHHHHHHHHHHHCCC
Confidence 3489999999999997 44321 11100 000011 1 23 8999999999999999
Q ss_pred EEEEec
Q 046395 236 KVIVDL 241 (535)
Q Consensus 236 ~VIldl 241 (535)
+||||+
T Consensus 288 ~VilDv 293 (750)
T 1bf2_A 288 KVYMDV 293 (750)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999998
|
| >2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A | Back alignment and structure |
|---|
Probab=90.47 E-value=0.33 Score=51.40 Aligned_cols=131 Identities=15% Similarity=0.229 Sum_probs=76.7
Q ss_pred HHHHHHHHHcCCCEEEeC-CccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIP-VGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ 248 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ 248 (535)
.+-++.||++|+|+|=|. |. .. +.. ..|+ -+..+.|+++|+.|+++||+||+|+ |......
T Consensus 59 ~~~LdyL~~LGv~~I~L~Pi~-~~---~~~-~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~ 133 (488)
T 2wc7_A 59 MEDLDYIQNLGINAIYFTPIF-QS---ASN-HRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFF 133 (488)
T ss_dssp HHTHHHHHHHTCCEEEESCCE-EE---CTT-CTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSH
T ss_pred HHhhHHHHHcCCCEEEECCCC-CC---CCC-CCCCCcCccccCcccCCHHHHHHHHHHHHHCCCEEEEEeCCCcCCCcCH
Confidence 356889999999999883 31 11 110 0122 1468999999999999999999999 5332110
Q ss_pred -----------C---CCCC-CC--------C-CCCC-----------CCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEE
Q 046395 249 -----------N---GSPH-SG--------S-RDGF-----------QEWS-DSDIQETVAIIDFLASRYADHPSLVAIE 292 (535)
Q Consensus 249 -----------n---g~~~-sg--------~-~~~~-----------~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~e 292 (535)
+ .|-+ .+ . ...+ ..|. ++.++...++++... .|+= ..+ -++
T Consensus 134 ~f~~~~~~~~~s~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl-~~gv-DGf-R~D 210 (488)
T 2wc7_A 134 FFHDVLENGPHSPWVNWFKIEGWPLSPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL-KFGI-DGW-RLD 210 (488)
T ss_dssp HHHHHHHHGGGCTTGGGBCBCSSSCCSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTC-CEE-EES
T ss_pred HHHHHHhcCCCCCCCCceeecCCCCCCCCCCCCCCccccCCCCCcCeeccCCHHHHHHHHHHHHHHH-HCCC-CEE-EEe
Confidence 0 0000 00 0 0011 1122 667777888887777 4532 122 255
Q ss_pred eecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 293 LMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 293 l~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
..++... + .+.+++.+.+++..|+.+++-
T Consensus 211 ~~~~i~~-----~---~~~~~~~~~~~~~~p~~~~vg 239 (488)
T 2wc7_A 211 VPFEIKT-----P---GFWQEFRDRTKAINPEAYIVG 239 (488)
T ss_dssp SGGGCCC-----T---THHHHHHHHHHHHCTTCEEEE
T ss_pred cccccCh-----H---HHHHHHHHHHHhhCCCeEEEE
Confidence 5655431 1 266677788888888876543
|
| >4b0b_A 3-hydroxydecanoyl-[acyl-carrier-protein] dehydrat; lyase, fatty acid biosynthesis, bacterial virulence, drug DI; HET: 54F; 1.90A {Pseudomonas aeruginosa} PDB: 4b0c_A* 4b0j_A* 4b8u_A* 4b0i_A* | Back alignment and structure |
|---|
Probab=90.36 E-value=0.07 Score=48.52 Aligned_cols=17 Identities=0% Similarity=-0.197 Sum_probs=15.7
Q ss_pred ceEEEecCCccCCccccC
Q 046395 510 REDGIKNLKEFGDDYYRP 527 (535)
Q Consensus 510 ~~~~~k~v~~~~~~~f~~ 527 (535)
+++|+|+|+ .||+||+|
T Consensus 53 ~i~a~k~V~-~d~~ff~G 69 (171)
T 4b0b_A 53 ELVAELDIN-PDLWFFAC 69 (171)
T ss_dssp EEEEEEECC-TTCHHHHH
T ss_pred EEEEEEEeC-CCCCeecC
Confidence 699999999 99999974
|
| >2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A | Back alignment and structure |
|---|
Probab=90.29 E-value=0.46 Score=50.10 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCC----CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDP----KPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p----~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|=| |+.- ..... .....|. -+..+.|+++|+.|+++||+||||+
T Consensus 46 ~~~LdyL~~lGvt~I~l~Pi~~-~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (478)
T 2guy_A 46 IDKLDYIQGMGFTAIWITPVTA-QLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDV 118 (478)
T ss_dssp HHTHHHHHTTTCCEEEECCCEE-ECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCCccc-CCccccCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35578999999999998 4532 11000 0000121 1468999999999999999999998
|
| >1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A* | Back alignment and structure |
|---|
Probab=89.83 E-value=0.54 Score=49.68 Aligned_cols=57 Identities=25% Similarity=0.253 Sum_probs=39.3
Q ss_pred HHHHHHHHcCCCEEEeC-Cccccc------cCCC----CCC-----CCc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRIP-VGWWIA------YDPK----PPK-----PFV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRip-v~~w~~------~~p~----~~~-----~~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.||++|+|+|=|+ |. ... .++. +++ ..+ -+..+.|+++|+.|+++||+||||+
T Consensus 29 ~~LdyL~~LGvt~IwL~Pi~-~~~~~~~~GY~~~dy~~~~~~~q~~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 103 (485)
T 1wpc_A 29 SDASNLKSKGITAVWIPPAW-KGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 103 (485)
T ss_dssp HHHHHHHHHTCCEEEECCCS-EESSTTCCSCSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcc-cCCCCCCCCCCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 55889999999999983 32 100 0000 000 011 1468999999999999999999998
|
| >2wsk_A Glycogen debranching enzyme; carbohydrate metabolism, hydrolase, glycosidase, ISO-amylase glycosyl hydrolase, glycogen metabolism; 2.25A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=89.81 E-value=1.1 Score=49.39 Aligned_cols=58 Identities=24% Similarity=0.523 Sum_probs=39.0
Q ss_pred HHHHHHHHcCCCEEEe-CCccccc--------------cCCC----CCCCCccc---hHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIA--------------YDPK----PPKPFVGG---SLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~--------------~~p~----~~~~~~~~---~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.-++.||++|+|+|=| ||.-... .++. +...|-.+ ..+.|+++|+.|+++||+||||+
T Consensus 183 ~~l~yL~~LGvt~i~L~Pi~~~~~~~~~~~~g~~~~wGY~~~~y~~~~~~~G~~p~~~~~d~~~lv~~~H~~Gi~VilD~ 262 (657)
T 2wsk_A 183 VMINYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDI 262 (657)
T ss_dssp HHHHHHHHHTCCEEEESCCEEECCCHHHHTTTCCCSSCCCEEEEEEECGGGCSSGGGHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cchHHHHHcCCCEEEECCccccCccccccccccccccCcCcccCCCCCHHHcCCCCcCHHHHHHHHHHHHHCCCEEEEEE
Confidence 3599999999999997 4421100 0000 00012111 47999999999999999999998
|
| >2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.72 E-value=0.49 Score=50.02 Aligned_cols=58 Identities=17% Similarity=0.256 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCC----CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDP----KPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p----~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|=| ||.- ..... .....|. -+..+.|+++|+.|+++||+||+|+
T Consensus 46 ~~~LdyL~~LGv~~I~l~Pi~~-~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 118 (484)
T 2aaa_A 46 IDHLDYIEGMGFTAIWISPITE-QLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (484)
T ss_dssp HHTHHHHHTTTCCEEEECCCEE-ECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCcccc-CcccccccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35589999999999998 4421 11000 0000121 1468999999999999999999999
|
| >1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A | Back alignment and structure |
|---|
Probab=89.59 E-value=0.58 Score=49.36 Aligned_cols=58 Identities=21% Similarity=0.244 Sum_probs=39.7
Q ss_pred HHHHHHHHHcCCCEEEeC-Cccccc------cCCC----CCC-----CCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIP-VGWWIA------YDPK----PPK-----PFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v~~w~~------~~p~----~~~-----~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+++|=|+ |. ... .++. +++ ..++ +..+.|+++|+.|+++||+||||+
T Consensus 26 ~~~LdyL~~LGvt~I~l~Pi~-~~~~~~~~GY~~~dy~~~~~~~~~~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 101 (480)
T 1ud2_A 26 HDDAAALSDAGITAIWIPPAY-KGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVYGDV 101 (480)
T ss_dssp HHHHHHHHHHTCCEEEECCCS-EESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCcc-cCCCCCCCCcCccchhhcccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 356889999999999883 32 100 0000 000 0111 468999999999999999999998
|
| >1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A* | Back alignment and structure |
|---|
Probab=89.54 E-value=0.53 Score=52.17 Aligned_cols=59 Identities=19% Similarity=0.223 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCC-----CCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPK-----PPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~-----~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+++|=|+=-+.....|. ....|+ -+..+.|+++|+.|+++||+||+|+
T Consensus 55 ~~kLdyLk~LGv~aIwL~Pi~~~~~~~~~~g~~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 128 (686)
T 1qho_A 55 RQKLPYLKQLGVTTIWLSPVLDNLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (686)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHhcCCCEEEECccccCCcccccCCCCCcCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 3557899999999999832221111110 001122 1468999999999999999999998
|
| >3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A | Back alignment and structure |
|---|
Probab=89.40 E-value=0.61 Score=49.23 Aligned_cols=57 Identities=21% Similarity=0.218 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCCEEEeC-CccccccCCCC-C----C-----C------Ccc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIP-VGWWIAYDPKP-P----K-----P------FVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v~~w~~~~p~~-~----~-----~------~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|=|+ |. ... .+.. + . . .++ +..+.|+++|+.|+++||+||||+
T Consensus 24 ~~~LdyL~~LGvt~I~L~Pi~-~~~-~~~~~GY~~~dy~~~~~~~~~~~id~~~Gt~~df~~lv~~aH~~Gi~VilD~ 99 (483)
T 3bh4_A 24 QNDAEHLSDIGITAVWIPPAY-KGL-SQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (483)
T ss_dssp HHHHHHHHHHTCCEEEECCCS-EES-STTSCSSSEEETTCSSCSCCSSCSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEcCccc-cCC-CCCCCCcccccccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 356889999999999983 32 110 0000 0 0 0 111 468999999999999999999998
|
| >3vgf_A Malto-oligosyltrehalose trehalohydrolase; alpha/beta barrel, alpha-amylas hydrolase; HET: GLC FLC; 2.30A {Sulfolobus solfataricus} PDB: 3vge_A* 3vgd_A* 3vgb_A* 1eh9_A* 3vgh_A* 3vgg_A* 1eha_A | Back alignment and structure |
|---|
Probab=89.36 E-value=0.71 Score=49.85 Aligned_cols=132 Identities=17% Similarity=0.199 Sum_probs=70.5
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCCC-CC---C--c--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKPP-KP---F--V--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQNG 250 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~-~~---~--~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ng 250 (535)
.+.+..||++|+|+|=| |+.- ......-| .+ | + -+..+.|+++|+.|+++||+||+|+ |..+.+..-
T Consensus 122 ~~~l~~l~~lG~~~v~l~Pi~~-~~~~~~~GY~~~~~~~~~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~~~~~~~~ 200 (558)
T 3vgf_A 122 IRKLDYLKDLGITAIEIMPIAQ-FPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDVVYNHVGPEGNYM 200 (558)
T ss_dssp HHTHHHHHHHTCCEEEECCCEE-CSSSCCCSTTCCEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCG
T ss_pred HHHHHHHHHcCCcEEEECCccc-CCCCCCcCcccccccccccccCCHHHHHHHHHHHHHcCCEEEEEEeeccccCCCCcc
Confidence 35689999999999998 4421 00000000 01 1 0 1468999999999999999999999 544322100
Q ss_pred CCC-----------CCCCCCCCCC-ChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHH
Q 046395 251 SPH-----------SGSRDGFQEW-SDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTV 318 (535)
Q Consensus 251 ~~~-----------sg~~~~~~~W-~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aI 318 (535)
..+ .+.......+ .+..++..++.+...++.|+=+- +-++..-.-.. . .-..+++++.+.+
T Consensus 201 ~~~~~~~~~~~~~~~g~~~n~~~~~~~~v~~~l~~~~~~w~~~~gvDG--fR~D~~~~~~~--~---~~~~f~~~l~~~~ 273 (558)
T 3vgf_A 201 VKLGPYFSQKYKTPWGLTFNFDDAESDEVRKFILENVEYWIKEYNVDG--FRLSAVHAIID--T---SPKHILEEIADVV 273 (558)
T ss_dssp GGTSCCEEEEEEETTEEEECSSSTTHHHHHHHHHHHHHHHHHHHCCCE--EEESCGGGCCC--C---SSSCHHHHHHHHH
T ss_pred cccCCccCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHHHHHHhCCCE--EEEeccccccc--c---cHHHHHHHHHHHH
Confidence 000 0000001111 15667777888888887664211 11222111110 0 0134666777777
Q ss_pred HhcC
Q 046395 319 RKYS 322 (535)
Q Consensus 319 R~~~ 322 (535)
++..
T Consensus 274 ~~~~ 277 (558)
T 3vgf_A 274 HKYN 277 (558)
T ss_dssp HHTT
T ss_pred hhcC
Confidence 7765
|
| >2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP} | Back alignment and structure |
|---|
Probab=89.30 E-value=0.55 Score=50.64 Aligned_cols=54 Identities=28% Similarity=0.537 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.||++|+|+|=| ||.- . +.....|+ -+..+.|+++|+.|+++||+||+|+
T Consensus 35 ~~ldyl~~lGv~~i~l~Pi~~-~---~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~Gi~vilD~ 99 (555)
T 2ze0_A 35 EKLDYLVELGVDIVWICPIYR-S---PNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRRGLKVILDL 99 (555)
T ss_dssp HTHHHHHHHTCCEEEECCCEE-C---CCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCccc-C---CCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5688999999999998 4421 1 11001121 1468999999999999999999999
|
| >3aj6_A Main hemagglutinin component; toxin, beta-trefoil; HET: NGA; 1.48A {Clostridium botulinum} PDB: 1qxm_A 3aj5_A* 2ehm_A* 2ehi_A* 2ehn_A* 3ah1_A* 3ah2_A* 3ah4_A* 2e4m_A | Back alignment and structure |
|---|
Probab=89.27 E-value=5.7 Score=38.87 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=74.3
Q ss_pred CCCCCCCCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEec-CCeEEEEee-CCc-EEEeecCCCeEE
Q 046395 10 KNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRIN-ETFYNFRLS-NKQ-FIGLENQGNKLV 86 (535)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~-~~~~~~~~~-~~~-~v~~~~~~~~~~ 86 (535)
-+++|.+|+-..++|..+.-.|---..++...+=++... .-..|+|.... ++.|.+|.. ++. .++.+..++.|+
T Consensus 5 ~~~~~~~g~~~~I~s~~~~n~vl~~~~~~~v~~~~~~~~---~~Q~W~~~yd~~~g~Y~I~n~~~~~lvL~~~~~~~~V~ 81 (286)
T 3aj6_A 5 NANDLRNNEVFFISPSNNTNKVLDKISQSEVKLWNKLSG---ANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVS 81 (286)
T ss_dssp CTTSCCTTCEEEEEETTCTTEEEEECSSSCEEEEECCCC---GGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEE
T ss_pred cCCcCCCCCEEEEEEcCCCceEEeccCCCcEEEecCCCC---cCCeEEEEEcCCCCeEEEEECCCCcEEEEccCCCCCEE
Confidence 479999999999999966544433333333444455443 66777888764 589999965 444 456654344588
Q ss_pred EeccCCCCCCceEEEecC-CCCceeEEEec-C-CceEEEec
Q 046395 87 AVSATEKFPEPFQITRKN-GEPHRVRFRAS-N-GYFLQAKS 124 (535)
Q Consensus 87 a~~~~~~~~e~f~~~~~~-~~~~~v~I~~~-n-G~flq~~~ 124 (535)
.-.+.-...+-|.|++.. +. ..+|+.. + ++.|.+.+
T Consensus 82 ~~~~~g~~~Q~W~l~~~~~dG--~y~i~n~~~s~~vLdv~~ 120 (286)
T 3aj6_A 82 VKTDTNGDNQYWYLLQNYISR--NVIIRNYMNPNLVLQYNI 120 (286)
T ss_dssp EECCCCCGGGCEEEEECTTTC--CEEEEESSCTTEEEEECT
T ss_pred EeCCCCCcceEEEEEEeCCCC--EEEEEECCCCceEEEecC
Confidence 888888888999999874 44 4677773 4 67777763
|
| >1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.27 E-value=0.54 Score=50.70 Aligned_cols=54 Identities=19% Similarity=0.413 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.|+++|+++|=| ||.- . |.....|+ -+..+.++++|+.|+++||+||||+
T Consensus 35 ~~ldyl~~LGv~~I~l~Pi~~-~---~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (558)
T 1uok_A 35 SKLDYLKELGIDVIWLSPVYE-S---PNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (558)
T ss_dssp TTHHHHHHHTCCEEEECCCEE-C---CCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCccc-C---CCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4578999999999998 3321 1 11001121 1468999999999999999999999
|
| >1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.26 E-value=0.54 Score=50.86 Aligned_cols=54 Identities=20% Similarity=0.424 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.||++|+++|=| ||.- . |.....|+ -+..+.|+++|+.|+++||+||||+
T Consensus 49 ~~LdyL~~LGv~~I~l~Pi~~-~---~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~Gi~VilD~ 113 (570)
T 1m53_A 49 EKLDYLKSLGIDAIWINPHYD-S---PNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 113 (570)
T ss_dssp HTHHHHHHHTCCEEEECCCEE-C---CCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCccc-C---CCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5678999999999988 3321 1 11001121 1468999999999999999999999
|
| >1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=89.15 E-value=0.71 Score=49.26 Aligned_cols=57 Identities=19% Similarity=0.220 Sum_probs=39.3
Q ss_pred HHHHHHHHcCCCEEEeCCccccccCCCC-C----C-----C------Cc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRIPVGWWIAYDPKP-P----K-----P------FV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRipv~~w~~~~p~~-~----~-----~------~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.||++|+|+|=|+=-+... .+.. | . . .+ -+..+.|+++|+.|+++||+||||+
T Consensus 28 ~~LdyLk~LGvt~IwL~Pi~~~~-~~~~~GY~~~dy~~l~~f~~~~~idp~~Gt~~dfk~Lv~~aH~~Gi~VilD~ 102 (515)
T 1hvx_A 28 NEANNLSSLGITALWLPPAYKGT-SRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (515)
T ss_dssp HHHHHHHHTTCCEEEECCCSEES-STTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhcCCCEEEeCCcccCC-CCCCCCcCeecccccccccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 56899999999999983211110 0000 0 0 0 11 1468999999999999999999998
|
| >2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A* | Back alignment and structure |
|---|
Probab=89.11 E-value=0.3 Score=53.30 Aligned_cols=138 Identities=12% Similarity=0.115 Sum_probs=74.0
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc-----ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCCC---
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI-----AYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQN--- 249 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~-----~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~n--- 249 (535)
+.++.||++|+|+|=| ||.-.. ..++......+ -+..+.|+++|+.|+++||+||+|+ |..+.+.-
T Consensus 148 ~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~ 227 (602)
T 2bhu_A 148 EKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGNYLSS 227 (602)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSCCHHH
T ss_pred HHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHCCCEEEEEecccccccCCccccc
Confidence 5579999999999997 442100 00110000000 1468999999999999999999999 44322110
Q ss_pred --C-CCCCC--C-CCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 046395 250 --G-SPHSG--S-RDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 250 --g-~~~sg--~-~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~ 322 (535)
+ +.+.. . ......|. ++.++..++.++...+.|+=+ .+ -+++.+.-... .. ..+++++.+.+++.
T Consensus 228 ~~~~~~~~~~~~~w~~~ln~~~~~v~~~i~~~~~~W~~~~gvD-Gf-R~D~~~~i~~~-~~----~~fl~~~~~~v~~~- 299 (602)
T 2bhu_A 228 YAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYHFD-GL-RLDATPYMTDD-SE----THILTELAQEIHEL- 299 (602)
T ss_dssp HCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHCCS-EE-EETTGGGCCCC-SS----SCHHHHHHHHHHTT-
T ss_pred cCcccccCCCCCCCCCCccCCCHHHHHHHHHHHHHHHHHhCCC-EE-EEechHhhhcc-ch----HHHHHHHHHHHhhc-
Confidence 0 00000 0 00011222 677777788777777666421 12 23444332210 01 13556666777777
Q ss_pred CCcEEEE
Q 046395 323 SSAYVIL 329 (535)
Q Consensus 323 p~~~ii~ 329 (535)
++.+++-
T Consensus 300 ~~~~li~ 306 (602)
T 2bhu_A 300 GGTHLLL 306 (602)
T ss_dssp CSCCEEE
T ss_pred CCeEEEE
Confidence 6655443
|
| >1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A* | Back alignment and structure |
|---|
Probab=89.08 E-value=0.57 Score=50.52 Aligned_cols=54 Identities=24% Similarity=0.469 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.||++|+++|=| ||.- . |.....|+ -+..+.|+++|+.|+++||+||||+
T Consensus 36 ~~Ldyl~~LGv~~I~L~Pi~~-~---~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~ 100 (557)
T 1zja_A 36 EKLDYLKGLGIDAIWINPHYA-S---PNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDV 100 (557)
T ss_dssp HTHHHHHHHTCCEEEECCCEE-C---CCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCCcc-C---CCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5678999999999987 4421 1 11001121 1468999999999999999999999
|
| >4ad1_A Glycosyl hydrolase family 71; glycoside hydrolase GH99, CAZY, enzyme-carbohydra interaction, mannose glycosidase inhibition; 1.90A {Bacteroides xylanisolvens} PDB: 4ad2_A* 4ad3_A* 4ad4_A* 4ad5_A* | Back alignment and structure |
|---|
Probab=88.87 E-value=0.9 Score=46.57 Aligned_cols=80 Identities=16% Similarity=0.174 Sum_probs=55.4
Q ss_pred cchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG 259 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~ 259 (535)
.+.+++|++|++.||..+=+-..+ ++. + ..-+.|+.+++.|.++|+++.++++...+
T Consensus 104 ~v~~~h~~~Ak~aGIDgf~l~w~~-------~~~-~--~d~~~l~~~l~aA~~~~~k~~f~~~~~~~------------- 160 (380)
T 4ad1_A 104 NILTKHMDMFVMARTGVLALTWWN-------EQD-E--TEAKRIGLILDAADKKKIKVCFHLEPYPS------------- 160 (380)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEECC-------CCS-H--HHHHHHHHHHHHHHHTTCEEEEEECCCTT-------------
T ss_pred HHHHHHHHHHHHcCCCEEEEEecC-------CCC-c--ccHHHHHHHHHHHHHcCCeEEEEECCCCC-------------
Confidence 455899999999999999875321 111 1 12267888999999999999988875321
Q ss_pred CCCCChHHHHHHHHHHHHHHHHhCCCCcE
Q 046395 260 FQEWSDSDIQETVAIIDFLASRYADHPSL 288 (535)
Q Consensus 260 ~~~W~~~~~~~~~~~~~~la~ry~~~p~V 288 (535)
...+..++-+..|.++|.++|+.
T Consensus 161 ------~~~~~~~~di~~li~~Y~~~pay 183 (380)
T 4ad1_A 161 ------RNVQNLRENIVKLITRYGNHPAF 183 (380)
T ss_dssp ------CCHHHHHHHHHHHHHHHTTSTTB
T ss_pred ------CChHHHHHHHHHHHHHhcCCCce
Confidence 12245566677777788776643
|
| >1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=88.67 E-value=0.41 Score=50.64 Aligned_cols=144 Identities=15% Similarity=0.243 Sum_probs=80.9
Q ss_pred HHHHHH--------HHcCCCEEEe-CCccc---cccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCC
Q 046395 184 EDFKFM--------SQNGLNAVRI-PVGWW---IAYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRV 246 (535)
Q Consensus 184 ~D~~~i--------k~~G~N~VRi-pv~~w---~~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg 246 (535)
+-++.| |++|+++|=| ||.-- ...++......+ -+..+.|+++|+.|+++||+||+|+ |....
T Consensus 31 ~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~Gi~VilD~V~NH~s~~ 110 (488)
T 1wza_A 31 EKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDLPINHTSER 110 (488)
T ss_dssp HTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEECCCSBCCTT
T ss_pred HhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEeccccccCc
Confidence 458899 9999999998 34210 000110000001 1468999999999999999999999 43221
Q ss_pred C----------CC---CCCC-CCCC---------C------------------C--CCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 247 S----------QN---GSPH-SGSR---------D------------------G--FQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 247 ~----------~n---g~~~-sg~~---------~------------------~--~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
. .+ .+-+ .... . + ...|. ++.++...++++...++
T Consensus 111 ~~~f~~~~~~~~~~y~d~y~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~f~~~~pdln~~np~Vr~~i~~~~~~Wl~~- 189 (488)
T 1wza_A 111 HPWFLKASRDKNSEYRDYYVWAGPDTDTKETKLDGGRVWHYSPTGMYYGYFWSGMPDLNYNNPEVQEKVIGIAKYWLKQ- 189 (488)
T ss_dssp SHHHHHHHTCTTCTTGGGBCBCCSCCCCCBCSSSCBCSEEEETTEEEECSSCTTSCBBCTTSHHHHHHHHHHHHHHHHT-
T ss_pred cHhhhhhhcCCCCCCcCeeecCCCCCCCCCccccCCCcccccCCceEEeccCCCCcccccCCHHHHHHHHHHHHHHHHc-
Confidence 1 00 0000 0000 0 0 01122 56677777777777664
Q ss_pred CCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCC
Q 046395 283 ADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~ 333 (535)
+-..+ -++..+..... .+......+.+++.+.+++..| .++++-.|
T Consensus 190 -gvDGf-R~Da~~~i~~~-~~~~~~~~~~~~~~~~~~~~~p--~~~vgE~~ 235 (488)
T 1wza_A 190 -GVDGF-RLDGAMHIFPP-AQYDKNFTWWEKFRQEIEEVKP--VYLVGEVW 235 (488)
T ss_dssp -TCCEE-EEECCCTTSCG-GGTTHHHHHHHHHHHHHTTTSC--CEEEEECC
T ss_pred -CCCCh-hHhhHhhhccc-cCcchHHHHHHHHHHHHhhcCC--CEEEEEeC
Confidence 32233 25666544321 1123456788888999999888 44555555
|
| >1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A | Back alignment and structure |
|---|
Probab=88.44 E-value=0.29 Score=50.79 Aligned_cols=57 Identities=25% Similarity=0.367 Sum_probs=39.3
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCC-------CCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKP-------PKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~-------~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.||++|+|+|=| |+. ........ ...|. -+..+.|+++|+.|+++||+||+|+
T Consensus 21 ~~l~yl~~lG~~~i~l~Pi~-~~~~~~~~~~~~~~~~~gY~~~~y~~~~~~~G~~~d~~~lv~~~h~~Gi~VilD~ 95 (422)
T 1ua7_A 21 HNMKDIHDAGYTAIQTSPIN-QVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDA 95 (422)
T ss_dssp HTHHHHHHTTCSEEEECCCE-EECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCcc-ccccCCcCcCccCCccccccceeeeccCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 5578999999999997 431 11000000 00011 1568999999999999999999999
|
| >2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A* | Back alignment and structure |
|---|
Probab=88.43 E-value=0.61 Score=50.15 Aligned_cols=54 Identities=26% Similarity=0.452 Sum_probs=39.8
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.|+++|+|+|=| ||.- . |.....|+ -+..+.|+++|+.|.++||+||+|+
T Consensus 35 ~~Ldyl~~LGv~~I~l~Pi~~-~---~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~Gi~VilD~ 99 (543)
T 2zic_A 35 SKLDYLQKLGVMAIWLSPVYD-S---PMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMRGIKIIMDL 99 (543)
T ss_dssp HTHHHHHHHTCSEEEECCCEE-C---CCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCccc-C---CCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5578999999999998 3421 1 11001121 1468999999999999999999999
|
| >3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A* | Back alignment and structure |
|---|
Probab=88.42 E-value=0.92 Score=50.30 Aligned_cols=137 Identities=15% Similarity=0.211 Sum_probs=76.5
Q ss_pred HHHHHHHHcCCCEEEeCCccccccC-------------CCCCCCCc--------------cchHHHHHHHHHHHHHcCCE
Q 046395 184 EDFKFMSQNGLNAVRIPVGWWIAYD-------------PKPPKPFV--------------GGSLQALDNAFRWAQKYGMK 236 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRipv~~w~~~~-------------p~~~~~~~--------------~~~l~~ld~~i~~a~~~Gi~ 236 (535)
+-++.||++|+|+|=|+=-+..... ...|.+|. -+..+.|+++|+.|.++||+
T Consensus 257 ~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~GI~ 336 (695)
T 3zss_A 257 RRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKLGLE 336 (695)
T ss_dssp GGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 4588999999999998421211000 00111121 14589999999999999999
Q ss_pred EEEecCCCCCCCCCC-------CC---CCCCC-------CC-----CCCC---hHHHHHHHHHHHHHHHHhCCCCcEEEE
Q 046395 237 VIVDLHALRVSQNGS-------PH---SGSRD-------GF-----QEWS---DSDIQETVAIIDFLASRYADHPSLVAI 291 (535)
Q Consensus 237 VIldlH~~pg~~ng~-------~~---sg~~~-------~~-----~~W~---~~~~~~~~~~~~~la~ry~~~p~V~~~ 291 (535)
||+|+---.+....+ -+ .|... .. ..|. +..++...++++...+ |+ |-||
T Consensus 337 VilD~V~Nhs~~~~~~~~~~dwf~~~~dg~~~~~~~~~~~~~~~~dLn~~n~~p~V~~~l~~~l~~Wi~-~G----VDGf 411 (695)
T 3zss_A 337 IALDFALQCSPDHPWVHKHPEWFHHRPDGTIAHAENPPKKYQDIYPIAFDADPDGLATETVRILRHWMD-HG----VRIF 411 (695)
T ss_dssp EEEEECCEECTTSTHHHHCGGGSCCCTTSCCCCEEETTEEETTCEECCCSSCHHHHHHHHHHHHHHHHH-TT----CCEE
T ss_pred EEEEeeccCCccchhhhcccceeeecCCCCcccCCCCCccccccccccccCCcHHHHHHHHHHHHHHHH-hC----CCEE
Confidence 999983110111110 00 01000 00 1111 4566677777777776 52 3344
Q ss_pred EeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCC
Q 046395 292 ELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333 (535)
Q Consensus 292 el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~ 333 (535)
=+-+=.. .-..+.+++.+.+++..|+.++ ++-.|
T Consensus 412 RlD~a~~-------~~~~f~~~~~~~v~~~~pd~~~-vgE~~ 445 (695)
T 3zss_A 412 RVDNPHT-------KPVAFWERVIADINGTDPDVIF-LAEAF 445 (695)
T ss_dssp EESSGGG-------SCHHHHHHHHHHHHHHCTTCEE-EECCC
T ss_pred EecCcch-------hhHHHHHHHHHHHHhhCCCceE-EEeec
Confidence 4433111 1256777888889999998765 44445
|
| >1odz_A Mannanase A; hydrolase, family 26, glycoside-hydrolase, glycosynthase, manno-oligosaccharide; HET: MAN BMA; 1.4A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1r7o_A* 2whm_A* 1j9y_A 1gvy_A* 1gw1_A* | Back alignment and structure |
|---|
Probab=88.22 E-value=12 Score=38.07 Aligned_cols=128 Identities=11% Similarity=0.120 Sum_probs=69.9
Q ss_pred HHHHHHHHHHHHH---hCCC----CcEEEEEeecCCCCC-------CCChHHHHHHHHHHHHHHH-hcCCCcEEEE-cCC
Q 046395 269 QETVAIIDFLASR---YADH----PSLVAIELMNEPKAP-------DLKLDSLKTYYKAGYDTVR-KYSSSAYVIL-SNR 332 (535)
Q Consensus 269 ~~~~~~~~~la~r---y~~~----p~V~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR-~~~p~~~ii~-~~~ 332 (535)
+.+.+.++.+|+. +++. -.|+ |-.+-|..+. ..+++.+++.++.+++++| ....+.++.+ +..
T Consensus 142 ~~~~~~id~iA~~l~~l~~~~G~~vPV~-~Rp~HE~nG~WfwWg~~~~~p~~yk~lwr~~~d~~r~~~g~~Nliwvwsp~ 220 (386)
T 1odz_A 142 PVLNGYLDQVAEWANNLKDEQGRLIPVI-FRLYHENTGSWFWWGDKQSTPEQYKQLFRYSVEYLRDVKGVRNFLYAYSPN 220 (386)
T ss_dssp HHHHHHHHHHHHHHHTCBCTTSCBCCEE-EECSCSTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHTTSCCCSEEEEECCB
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCceEE-EEeccccCCCccccCCCCCCHHHHHHHHHHHHHHHHhhcCCceEEEEEeCC
Confidence 4566666666665 4332 1344 8899998863 1247899999999999999 5555555543 331
Q ss_pred --CCCChhhhhcc-cCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCc
Q 046395 333 --LGGEWSELLSF-ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEW 404 (535)
Q Consensus 333 --~g~~~~~~~~~-~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~ 404 (535)
+..+...+... |..+--.++.+-.|...... . ...+.+.. ....+..+.+..++|+.|+|+|...
T Consensus 221 ~~~~~~~~~~~~~YPGDdyVDivG~D~Y~~~~~~-----~-~f~~~~~~-~l~~~~~~A~~~~Kpial~E~G~~~ 288 (386)
T 1odz_A 221 NFWDVTEANYLERYPGDEWVDVLGFDTYGPVADN-----A-DWFRNVVA-NAALVARMAEARGKIPVISGIGIRA 288 (386)
T ss_dssp CCSSCCHHHHHSSCCCTTTCSEECCEEEECSSSC-----H-HHHHHHHH-HHHHHHHHHHHHTCEECBCEEEECH
T ss_pred CCCCCCccchhhcCCCCCeEEEEEEeccCCCCCC-----c-cHHHHHHH-HHHHHHHHhhcCCCeEEEEeccCCC
Confidence 11122333333 23333556777777542210 0 11111111 1122334443446679999999754
|
| >1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A* | Back alignment and structure |
|---|
Probab=88.12 E-value=0.73 Score=48.05 Aligned_cols=59 Identities=27% Similarity=0.422 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCEEEeC-Ccc------ccccCCCC----CC-----CCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIP-VGW------WIAYDPKP----PK-----PFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v~~------w~~~~p~~----~~-----~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|=|+ +.- +...++.. +. ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 31 ~~~Ldyl~~lGvt~I~l~Pi~~~~~~~~~~gY~~~dy~~lg~~~~~~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~ 107 (435)
T 1mxg_A 31 RSKIPEWYEAGISAIWLPPPSKGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADV 107 (435)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCCCcCcccccccccccccCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 355889999999999983 310 01111100 00 0111 468999999999999999999998
|
| >3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A* | Back alignment and structure |
|---|
Probab=87.99 E-value=0.73 Score=50.10 Aligned_cols=54 Identities=24% Similarity=0.336 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.|+++|+++|=| ||.- . |.....|+ -+..+.|+++|+.|+++||+||+|+
T Consensus 44 ~~Ldyl~~LGv~~i~l~Pi~~-~---~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~Gi~VilD~ 108 (589)
T 3aj7_A 44 SKLEYIKELGADAIWISPFYD-S---PQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDL 108 (589)
T ss_dssp HTHHHHHHHTCSEEEECCCEE-C---CCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECCccc-C---CCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 5578999999999987 3321 1 11000121 1468999999999999999999998
|
| >3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A* | Back alignment and structure |
|---|
Probab=87.72 E-value=3.9 Score=35.91 Aligned_cols=99 Identities=14% Similarity=0.282 Sum_probs=66.3
Q ss_pred CCceeEEEEee-cCcEEEEecC---CCceEEeccCCCCCCCCce----eEEEEecC---CeEEEEeeCCcEEEeecC---
Q 046395 16 DGTQVQLISTK-LKKYLTAENG---SETILMANHNSSSTSSWQT----FRLWRINE---TFYNFRLSNKQFIGLENQ--- 81 (535)
Q Consensus 16 ~~~~~~~~~~~-~~~~~~a~~~---g~~~~~anr~~~~~~~we~----f~~~~~~~---~~~~~~~~~~~~v~~~~~--- 81 (535)
+|+ .+|+++. .||+|=.+++ -|+.|+-=...- +.-.. +++-++.+ ++|.|+.. |+++.+.+.
T Consensus 4 ~G~-Y~I~n~~~sgk~lDv~~~sta~Gt~V~~w~~~g--~~nQ~~~~~W~~~~~~~~~~g~y~i~n~-G~~Ldv~~~~ta 79 (148)
T 3nbc_A 4 PGT-YNITNVAYTNRLIDLTGSNPAENTLIIGHHLNK--TPSGYGNQQWTLVQLPHTTIYTMQAVNP-QSYVRVRDDNLV 79 (148)
T ss_dssp SEE-EEEEESSCTTCEEEEGGGCCSTTEEEEEECCCS--TTTCCGGGCEEEEECTTSSEEEEEESSS-CCEEEEGGGCCS
T ss_pred CCE-EEEEEecCCCCeEECCCCcCCCCcEEEEeCCCC--ChhheeecEEEEEECCCcccceEEEEEC-CcEEEccCCCCC
Confidence 455 8999999 9999987765 356666544333 44555 67777777 89999966 999987642
Q ss_pred CCe-EEEeccCCCCCCceEEEecCCCCceeEEEecC-CceEEEe
Q 046395 82 GNK-LVAVSATEKFPEPFQITRKNGEPHRVRFRASN-GYFLQAK 123 (535)
Q Consensus 82 ~~~-~~a~~~~~~~~e~f~~~~~~~~~~~v~I~~~n-G~flq~~ 123 (535)
+|+ |+.-. ..+.|.|....++ +..+|..++ |+.|-+.
T Consensus 80 ~Gt~v~~~~----~~q~W~i~~~~~~-G~y~I~~~~sg~~Ldv~ 118 (148)
T 3nbc_A 80 DGAALVGSQ----QPTPVSIESAGNS-GQFRIKIPNLGLALTLP 118 (148)
T ss_dssp TTCBEEEES----SCCCEEEEECSST-TCEEEECTTSSEEEECC
T ss_pred CCcEEecCC----CCcEEEEEEccCC-CeEEEEeCCCCeEEEee
Confidence 233 55432 2478888874322 357888877 7777553
|
| >3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A | Back alignment and structure |
|---|
Probab=87.65 E-value=0.94 Score=49.77 Aligned_cols=58 Identities=14% Similarity=0.175 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc------ccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI------AYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~------~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.++.|+++|+|+|=| ||.--. ..++......++ +..+.|+++|+.|+++||+||+|+
T Consensus 110 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~GI~VilD~ 176 (644)
T 3czg_A 110 ERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREAGISLCADF 176 (644)
T ss_dssp HTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5578999999999998 443110 001110000111 468999999999999999999999
|
| >1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A* | Back alignment and structure |
|---|
Probab=87.48 E-value=0.92 Score=49.72 Aligned_cols=58 Identities=16% Similarity=0.290 Sum_probs=39.8
Q ss_pred HHHHHHHHcCCCEEEe-CCccc------cccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWW------IAYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w------~~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.|+++|+|+|=| ||.-- ...++......+ -+..+.|+++|+.|+++||+||+|+
T Consensus 117 ~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~GI~VilD~ 183 (628)
T 1g5a_A 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (628)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4578999999999998 44210 011111100011 1468999999999999999999999
|
| >3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A* | Back alignment and structure |
|---|
Probab=87.39 E-value=0.9 Score=50.17 Aligned_cols=58 Identities=19% Similarity=0.304 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCEEEeC-Cccc---cccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRIP-VGWW---IAYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRip-v~~w---~~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.|+++|+++|-|+ |.-. ...++......+ -+..+.++++|+.|+++||+||+|+
T Consensus 64 ~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~gi~vi~D~ 127 (669)
T 3k8k_A 64 QKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNRGIKIYLDY 127 (669)
T ss_dssp TTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 45889999999999983 3210 011111100011 1468999999999999999999998
|
| >4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus} | Back alignment and structure |
|---|
Probab=87.33 E-value=0.63 Score=51.67 Aligned_cols=54 Identities=9% Similarity=0.279 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.||++|+|+|=| ||.- . +.. ..|+ -+..+.|+++|+.|+++||+||||+
T Consensus 268 ~~kLdyLk~LGvt~IwL~Pi~~-s---~~~-~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~ 332 (696)
T 4aee_A 268 MKHIDHLEDLGVETIYLTPIFS-S---TSY-HRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDI 332 (696)
T ss_dssp HTTHHHHHHHTCCEEEECCCEE-E---SSS-SCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHhHHHHHcCCCEEEECCccc-C---CCC-CCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEec
Confidence 35688999999999987 3321 1 110 1122 1468999999999999999999998
|
| >2wvv_A Alpha-L-fucosidase; alpha-L-fucose, hydrolase, glycoside hydrolase family 29; 1.73A {Bacteroides thetaiotaomicron} PDB: 2xii_A* 2xib_A* 2wvv_B 2wvt_A* 2wvu_A* 2wvs_A* | Back alignment and structure |
|---|
Probab=87.05 E-value=7.5 Score=40.58 Aligned_cols=132 Identities=11% Similarity=0.067 Sum_probs=79.8
Q ss_pred cchHHHHHHHHHcCCCEEEeCC------ccccccCCCCCCCCccc----hHHHHHHHHHHHHHcCCEEEEecCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPV------GWWIAYDPKPPKPFVGG----SLQALDNAFRWAQKYGMKVIVDLHALRVSQN 249 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv------~~w~~~~p~~~~~~~~~----~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~n 249 (535)
|-.++-++.+|++|+.-|=+-- ..|. ..-..|+.. .-+.+.+++++|+++||++-|-+|..
T Consensus 78 fDp~~Wa~~~k~AGakyvvlTaKHHDGF~lwp----Sk~t~~n~~~~~~krDlv~el~~A~rk~Glk~GlY~S~~----- 148 (450)
T 2wvv_A 78 FDAKKWAKMAKEMGTKYVKITTKHHEGFCLWP----SKYTKYTVANTPYKRDILGELVKAYNDEGIDVHFYFSVM----- 148 (450)
T ss_dssp CCHHHHHHHHHHHTCSEEEEEEECTTCCBSSC----CTTCSCBGGGSTTCSCHHHHHHHHHHHTTCEEEEEEESC-----
T ss_pred CCHHHHHHHHHHcCCcEEEEEEeecCCccccC----CCCCCCccccCCCCCChHHHHHHHHHHcCCeEEEEecHH-----
Confidence 4457778889999999997722 2221 111113211 25788999999999999999988742
Q ss_pred CCCCCCCCCCCCCCC------hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 046395 250 GSPHSGSRDGFQEWS------DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 250 g~~~sg~~~~~~~W~------~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p 323 (535)
.|.|+.... ...+. +.+.+.+..-+++|..+|++ +.++-++-.++.. ...-.-...+.++.||+..|
T Consensus 149 dw~~p~y~~-~~~~~~~~~~~~~y~~~~~~Ql~ELlt~YG~-~d~lWfDg~~~~~-----~~~~~~~~~~~~~~i~~~qP 221 (450)
T 2wvv_A 149 DWSNPDYRY-DIKSKEDSIAFSRFLEFTDNQLKELATRYPT-VKDFWFDGTWDAS-----VKKNGWWTAHAEQMLKELVP 221 (450)
T ss_dssp CTTCTTCCS-SCCSHHHHHHHHHHHHHHHHHHHHHHHHCTT-CCEEEEESCCSHH-----HHHTHHHHHHHHHHHHHHST
T ss_pred HhcCCcccc-cccccccccchHHHHHHHHHHHHHHHHcCCC-cCEEEEcCCCCcC-----cchhhHHHHHHHHHHHHhCC
Confidence 121211110 01111 24555666677889999964 5676577544321 01122346788899999999
Q ss_pred CcEE
Q 046395 324 SAYV 327 (535)
Q Consensus 324 ~~~i 327 (535)
+.+|
T Consensus 222 ~~vv 225 (450)
T 2wvv_A 222 GVAI 225 (450)
T ss_dssp TCEE
T ss_pred cEEE
Confidence 7654
|
| >3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=86.81 E-value=0.97 Score=49.45 Aligned_cols=132 Identities=11% Similarity=0.224 Sum_probs=72.0
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCC-CC--C-----ccchHHHHHHHHHHHHHcCCEEEEec---CCCCCCCCCC
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPP-KP--F-----VGGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQNGS 251 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~-~~--~-----~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ng~ 251 (535)
+.++.||++|+|+|-| |+.-.. ....-+ .+ | .-+..+.|+++|+.|.++||+||+|+ |..+.+. ..
T Consensus 158 ~~L~yl~~lGv~~v~l~Pi~~~~-~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~Gi~VilD~V~NH~~~~~~-~~ 235 (618)
T 3m07_A 158 AKLPYLAELGVTVIEVMPVAQFG-GERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGYGLSVVLDIVLNHFGPEGN-YL 235 (618)
T ss_dssp TTHHHHHHHTCCEEEECCCEECS-SSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC-CH
T ss_pred HHHHHHHHcCCCEEEeCChhccC-CCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEeecCccCCCCcc-cc
Confidence 5678999999999998 441100 000000 00 0 01468999999999999999999998 3322110 00
Q ss_pred C--CCC--CCCCCCCC------C-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHh
Q 046395 252 P--HSG--SRDGFQEW------S-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRK 320 (535)
Q Consensus 252 ~--~sg--~~~~~~~W------~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~ 320 (535)
. .+. .......| . ++.++..++.+...++.|+=+ . +-++....-.. ..+ ..+.+++.+.||+
T Consensus 236 ~~~~~~~~~~~~~~~wg~~ln~~~p~V~~~i~~~~~~w~~~~gvD-G-fR~D~~~~~~~-~~~----~~f~~~l~~~v~~ 308 (618)
T 3m07_A 236 PLLAPAFFHKERMTPWGNGIAYDVDAVRRYIIEAPLYWLTEYHLD-G-LRFDAIDQIED-SSA----RHVLVEIAQRIRE 308 (618)
T ss_dssp HHHCGGGEEEEEEETTEEEECTTSHHHHHHHHHHHHHHHHHTTCS-E-EEETTGGGCCC-CSS----SCHHHHHHHHHHH
T ss_pred cccCchhhcCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCcc-E-EEecchhhhcc-cch----HHHHHHHHHHHHH
Confidence 0 000 00000112 2 677888888888888776431 1 11222222110 001 3466677777888
Q ss_pred cCCC
Q 046395 321 YSSS 324 (535)
Q Consensus 321 ~~p~ 324 (535)
..|.
T Consensus 309 ~~p~ 312 (618)
T 3m07_A 309 DITD 312 (618)
T ss_dssp HCCS
T ss_pred hCCC
Confidence 8765
|
| >3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A* | Back alignment and structure |
|---|
Probab=86.72 E-value=8.4 Score=37.80 Aligned_cols=108 Identities=9% Similarity=0.093 Sum_probs=69.6
Q ss_pred CCCceeEEEEeecCcEEEEecC---CCceEEecc---CCCCCCCCceeEEEEe--cCCeEEEEe-eCCcEEEeecC---C
Q 046395 15 LDGTQVQLISTKLKKYLTAENG---SETILMANH---NSSSTSSWQTFRLWRI--NETFYNFRL-SNKQFIGLENQ---G 82 (535)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~a~~~---g~~~~~anr---~~~~~~~we~f~~~~~--~~~~~~~~~-~~~~~v~~~~~---~ 82 (535)
|.+...+|+++..||.|-..++ -|+.|+--- ..- +.-..+++-.+ +++.|.|+. ..|+.+.+.+. +
T Consensus 3 l~~G~Y~I~N~~SGk~LDV~g~stanGa~Vqqw~~~g~ng--~~nQqW~~~~~~G~~G~Y~I~n~~SGkcLDV~~~stan 80 (293)
T 3ef2_A 3 LRRGIYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTI--NWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEA 80 (293)
T ss_dssp CCSEEEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSC--CTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCST
T ss_pred cCCcEEEEEECCCCCEEEcCCCCCCCCcEEEEeecCCCCC--CccEEEEEeeccCCCceEEEEECCCCCEEecCCCCCCC
Confidence 3445789999999998876643 244554322 212 35566677775 468999995 58999988742 3
Q ss_pred Ce-EEEec---cCCCCCCceEEEecCCCCceeEEEecC-CceEEEecc
Q 046395 83 NK-LVAVS---ATEKFPEPFQITRKNGEPHRVRFRASN-GYFLQAKSE 125 (535)
Q Consensus 83 ~~-~~a~~---~~~~~~e~f~~~~~~~~~~~v~I~~~n-G~flq~~~~ 125 (535)
|+ |+--. ..-+..+.|.|....++ +..+|...+ |+.|-+.+.
T Consensus 81 Gt~V~qw~~~~~~~g~nQqW~l~~~~g~-G~y~I~n~~SGk~LDV~g~ 127 (293)
T 3ef2_A 81 GTAVNGWQGTAFTTNPHQLWTIKKSSDG-TSYKIQNYGSKTFVDLVNG 127 (293)
T ss_dssp TEEEEEECCCTTCCCGGGCEEEEECTTS-SSEEEEETTTCCEEEEGGG
T ss_pred CCEEEEeccCCCCCCCCcEEEEEEeCCC-CEEEEEECCCCcEEEeCCC
Confidence 44 44333 13456999999987332 246677765 888877543
|
| >3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A | Back alignment and structure |
|---|
Probab=86.21 E-value=0.89 Score=50.34 Aligned_cols=59 Identities=22% Similarity=0.312 Sum_probs=40.2
Q ss_pred HHHHH--HHHHcCCCEEEeCCccccccCC---------CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFK--FMSQNGLNAVRIPVGWWIAYDP---------KPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~--~ik~~G~N~VRipv~~w~~~~p---------~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++ .||++|+++|=|+=-+.....| .....|+ -+..+.|+++|+.|+++||+||||+
T Consensus 58 ~~kLd~~yLk~LGvtaIwL~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~ 137 (683)
T 3bmv_A 58 INKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (683)
T ss_dssp HHHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHHcCCCEEEeCccccCcccccccccccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 35688 9999999999983212110000 0001122 1469999999999999999999998
|
| >1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ... | Back alignment and structure |
|---|
Probab=86.15 E-value=0.91 Score=50.28 Aligned_cols=58 Identities=19% Similarity=0.277 Sum_probs=40.4
Q ss_pred HHHHH--HHHHcCCCEEEe-CCccccccCC---C-----CCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFK--FMSQNGLNAVRI-PVGWWIAYDP---K-----PPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~--~ik~~G~N~VRi-pv~~w~~~~p---~-----~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++ .||++|+++|=| |+. .....| . ....|+ -+..+.|+++|+.|+++||+||||+
T Consensus 58 ~~kLd~~yLk~LGvt~IwL~Pi~-~~~~~~~~~~g~~~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 136 (686)
T 1d3c_A 58 INKINDGYLTGMGVTAIWISQPV-ENIYSIINYSGVNNTAYHGYWARDFKKTNPAYGTIADFQNLIAAAHAKNIKVIIDF 136 (686)
T ss_dssp HHHHHTTTTGGGTCCEEEECCCE-EECCCCEESSSCEECCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcCHHHHHhcCCCEEEeCCcc-cCCcccccccCccCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35688 999999999998 442 111000 0 001121 1469999999999999999999998
|
| >2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2 | Back alignment and structure |
|---|
Probab=86.08 E-value=0.3 Score=49.40 Aligned_cols=18 Identities=0% Similarity=-0.134 Sum_probs=17.1
Q ss_pred CceEEEecCCccCCccccC
Q 046395 509 KREDGIKNLKEFGDDYYRP 527 (535)
Q Consensus 509 ~~~~~~k~v~~~~~~~f~~ 527 (535)
++++++|+|+ .||+||+|
T Consensus 52 ~~i~a~~~V~-~d~~ff~g 69 (342)
T 2cf2_C 52 GYVEAELDIN-PDLWFFGC 69 (342)
T ss_pred CEEEEEEEeC-CCcceecC
Confidence 6899999999 99999997
|
| >1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=86.02 E-value=0.86 Score=50.43 Aligned_cols=59 Identities=19% Similarity=0.284 Sum_probs=40.7
Q ss_pred HHHHH--HHHHcCCCEEEeCCccccccCCC-------CCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFK--FMSQNGLNAVRIPVGWWIAYDPK-------PPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~--~ik~~G~N~VRipv~~w~~~~p~-------~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++ .||++|+++|=|+=-+.....+. ....|+ -+..+.|+++|+.|+++||+||||+
T Consensus 55 ~~kLd~~yLk~LGv~aIwL~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~ 132 (680)
T 1cyg_A 55 INKINDGYLTDMGVTAIWISQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDF 132 (680)
T ss_dssp HHHHHTSTTTTTTCCEEEECCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhcCHHHHHhCCCCEEEeCccccCccccccccCCCCCCCCcCchhccccCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35688 99999999999842121111010 001122 1469999999999999999999999
|
| >3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A* | Back alignment and structure |
|---|
Probab=85.83 E-value=12 Score=39.47 Aligned_cols=130 Identities=14% Similarity=0.159 Sum_probs=79.2
Q ss_pred chHHHHHHHHHcCCCEEEeCC------ccccccCCC---CCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRIPV------GWWIAYDPK---PPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGS 251 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv------~~w~~~~p~---~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~ 251 (535)
-.++-++.+|++|++-|=+-. ..|.---.. ...|+....-+.+.+++++|+++||++-+.++..- +
T Consensus 63 d~~~W~~~~k~aGakyvvlt~kHHdGF~lw~S~~t~~~v~~~p~~~~krDiv~el~~A~r~~gl~~g~Y~S~~d-----~ 137 (478)
T 3ues_A 63 DVDQWMDALVAGGMAGVILTCKHHDGFCLWPSRLTRHTVASSPWREGKGDLVREVSESARRHGLKFGVYLSPWD-----R 137 (478)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECTTCCBSSCCTTCSCBGGGSSGGGGTCCHHHHHHHHHHHTTCEEEEEECSCC-----S
T ss_pred CHHHHHHHHHHcCCCEEEEeEEecCCccccCCCCCCcccccCCccCCCCCHHHHHHHHHHHcCCeEEEEeChHH-----h
Confidence 346778889999999987622 112110000 00122112247889999999999999999876421 1
Q ss_pred CCCCCCCCCCCCC--hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecC--CCCCCCChHHHHHHHHHHHHHHHhcCCCcEE
Q 046395 252 PHSGSRDGFQEWS--DSDIQETVAIIDFLASRYADHPSLVAIELMNE--PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 252 ~~sg~~~~~~~W~--~~~~~~~~~~~~~la~ry~~~p~V~~~el~NE--P~~~~~~~~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
.+ +.|. +.+.+.+..-+++|..+|+... ++-++-.+. |..... ...+ ++.++.||++.|+.+|
T Consensus 138 ~~-------~~y~~~~~y~~~~~~ql~EL~~~Yg~~~-~~W~Dg~~~~~~~~~~~-~~~~----~~~~~~i~~~qP~~vi 204 (478)
T 3ues_A 138 TE-------ESYGKGKAYDDFYVGQLTELLTQYGPIF-SVWLDGANGEGKNGKTQ-YYDW----DRYYNVIRSLQPDAVI 204 (478)
T ss_dssp SC-------TTTTSSHHHHHHHHHHHHHHHHSSSCCS-EEEECCCCCCCTTSCCC-CCCH----HHHHHHHHHHCTTSEE
T ss_pred CC-------cccCchHHHHHHHHHHHHHHHhcCCcce-EEEeeCCCCCCCccchh-hhhH----HHHHHHHHHHCcCEEE
Confidence 11 1111 4677778888889999998633 444666552 211111 1122 5688999999999876
Q ss_pred E
Q 046395 328 I 328 (535)
Q Consensus 328 i 328 (535)
.
T Consensus 205 ~ 205 (478)
T 3ues_A 205 S 205 (478)
T ss_dssp E
T ss_pred E
Confidence 4
|
| >3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A | Back alignment and structure |
|---|
Probab=85.82 E-value=0.98 Score=49.19 Aligned_cols=59 Identities=22% Similarity=0.221 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCCEEEeCCccccc-------cCCC----CCC-----CCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIA-------YDPK----PPK-----PFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~-------~~p~----~~~-----~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.|+++|+++|=|+=-+... .++. +++ ..++ +..+.|+++|+.|+++||+||+|+
T Consensus 153 ~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~GI~VilD~ 229 (599)
T 3bc9_A 153 AERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNNDIKVYFDA 229 (599)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 356889999999999983211100 0000 000 0111 568999999999999999999998
|
| >4aio_A Limit dextrinase; hydrolase, pullulanase, glycoside hydrolase family 13; 1.90A {Hordeum vulgare} PDB: 2x4c_A* 2y4s_A* 2y5e_A* 2x4b_A | Back alignment and structure |
|---|
Probab=85.17 E-value=0.86 Score=51.73 Aligned_cols=23 Identities=13% Similarity=0.387 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHHHcCCEEEEec
Q 046395 219 SLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 219 ~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+..++++|+.|.++||+||||+
T Consensus 377 ~~~efk~LV~~aH~~GIkVIlDv 399 (884)
T 4aio_A 377 RIIEYRQMVQALNRIGLRVVMDV 399 (884)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHHhcCCceeeee
Confidence 47789999999999999999999
|
| >3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A* | Back alignment and structure |
|---|
Probab=85.06 E-value=1.3 Score=50.82 Aligned_cols=60 Identities=12% Similarity=0.174 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCC-------CCC-C---CC------c--cchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDP-------KPP-K---PF------V--GGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p-------~~~-~---~~------~--~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
.+-++.||++|+++|=|+=-+.....+ ..| . .| . -+..+.|+++|+.|+++||+||||+=
T Consensus 856 ~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~GI~VIlDvV 934 (1108)
T 3ttq_A 856 AKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHANMQVMADVV 934 (1108)
T ss_dssp HHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 466999999999999984222111110 001 0 00 0 14689999999999999999999993
|
| >3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A* | Back alignment and structure |
|---|
Probab=85.00 E-value=1.4 Score=49.75 Aligned_cols=59 Identities=15% Similarity=0.223 Sum_probs=40.0
Q ss_pred HHHHHHHHcCCCEEEeCCccccccCC-------CCC----CCC--c------cchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 184 EDFKFMSQNGLNAVRIPVGWWIAYDP-------KPP----KPF--V------GGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRipv~~w~~~~p-------~~~----~~~--~------~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
+-+..||++|+++|=|+=-+...... .-| ..| . -+..+.|+++|+.|+++||+||+|+=
T Consensus 637 ~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~GI~VilD~V 714 (844)
T 3aie_A 637 KNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSKGIKVMADWV 714 (844)
T ss_dssp HTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEc
Confidence 45999999999999973211111000 000 001 1 14689999999999999999999994
|
| >3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A* | Back alignment and structure |
|---|
Probab=84.64 E-value=1.2 Score=49.03 Aligned_cols=58 Identities=16% Similarity=0.243 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.|+++|+++|=|+=.+........ ..|. -+..+.++++|+.|+++||+||+|+
T Consensus 114 ~~~LdyL~~lGv~~v~l~P~~~~~~~~~~-~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~Gi~Vi~D~ 181 (655)
T 3ucq_A 114 EERLDYLEGLGVKYLHLMPLLRPREGEND-GGYAVQDYRAVRPDLGTMDDLSALARALRGRGISLVLDL 181 (655)
T ss_dssp HTTHHHHHHTTCCEEEECCCEEECSSCCG-GGTSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCEEEECCCcCCCCCCCC-CCcCCcCcCccCccCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 35578999999999998532211000000 0121 1468999999999999999999998
|
| >1gjw_A Maltodextrin glycosyltransferase; alpha-amylase, maltosyltransferase; HET: MAL GLC; 2.1A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1gju_A* | Back alignment and structure |
|---|
Probab=84.49 E-value=1.1 Score=49.10 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=39.5
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCCCC---CCc--------c----------chHHHHHHHHHHHHHcCCEEEEe
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKPPK---PFV--------G----------GSLQALDNAFRWAQKYGMKVIVD 240 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~---~~~--------~----------~~l~~ld~~i~~a~~~Gi~VIld 240 (535)
.+-++.||++|+|+|=| ||.- .......+. .|. + +..+.|+++|+.|+++||+||||
T Consensus 123 ~~~l~~l~~lG~~~v~l~Pi~~-~~~~~~~g~~~~gY~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~H~~Gi~VilD 201 (637)
T 1gjw_A 123 MLLLPFVKSLGADAIYLLPVSR-MSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILD 201 (637)
T ss_dssp HHTHHHHHHHTCCEEEECCCEE-ECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCee-cccccccCCCCCccCCCCcCCcCcccCCCcccccchHHHHHHHHHHHHHCCCEEEEE
Confidence 46789999999999997 4421 110000000 121 0 12799999999999999999999
Q ss_pred c
Q 046395 241 L 241 (535)
Q Consensus 241 l 241 (535)
+
T Consensus 202 ~ 202 (637)
T 1gjw_A 202 F 202 (637)
T ss_dssp E
T ss_pred E
Confidence 8
|
| >3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=84.47 E-value=8.5 Score=40.40 Aligned_cols=127 Identities=12% Similarity=0.124 Sum_probs=77.1
Q ss_pred chHHHHHHHHHcCCCEEEeCC------ccccccCCCCCCCCc-------cchHHHHHHHHHHHHHcCCEEEEecCCCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRIPV------GWWIAYDPKPPKPFV-------GGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv------~~w~~~~p~~~~~~~-------~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~ 247 (535)
-.++-++.+|++|+.-|=+-- ..|. ..-..|+ ...-+.+.+++++|+++||++.+-+|...
T Consensus 55 d~~~w~~~~k~aGaky~v~takHHdGf~lw~----S~~t~~~~~~~p~~~~k~Div~e~~~A~r~~Gl~~g~Y~s~~d-- 128 (469)
T 3eyp_A 55 DCRQWMQTLKAAGIPAAILTAKHADGFCLWP----SKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGPHD-- 128 (469)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECTTCCBSSC----CTTCSSBGGGSSGGGGTCCHHHHHHHHHHHHTCEEEEEECSSC--
T ss_pred CHHHHHHHHHHcCCCEEEEEEEeCCCccccC----CCCCCcccccCcccCCCCCHHHHHHHHHHHcCCeEEEEeChhH--
Confidence 346778889999999987622 1121 1111121 11237889999999999999999888421
Q ss_pred CCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcE
Q 046395 248 QNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 248 ~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ 326 (535)
|.+.. .+.+. +.+.+.+..-+++|..+|+.-. ++=++-.+.+. .+...+.+|. +.||++.|+.+
T Consensus 129 ---w~~~~----~~~y~~~~Y~~~~~~Ql~ELlt~Yg~i~-~lW~Dg~~~~~---~~~~~~~~w~----~~i~~~qP~~v 193 (469)
T 3eyp_A 129 ---RHEHL----SPLYTTERYKEYYAHQLGELMSDYGKIW-ETWWDGAGADE---LTTPVYRHWY----KIVREKQPDCV 193 (469)
T ss_dssp ---HHHHT----STTCCHHHHHHHHHHHHHHHHHSSCCCC-EEECCCTTCTT---CCHHHHHHHH----HHHHHHCTTCE
T ss_pred ---hCCCc----CcccCcHHHHHHHHHHHHHHHhcCCccc-EEEeCCCCCCC---ccchhHhHHH----HHHHHHCcCcE
Confidence 00100 01122 5677777788888999998533 33344444332 1223333333 89999999887
Q ss_pred EE
Q 046395 327 VI 328 (535)
Q Consensus 327 ii 328 (535)
|+
T Consensus 194 i~ 195 (469)
T 3eyp_A 194 IF 195 (469)
T ss_dssp EE
T ss_pred Ee
Confidence 64
|
| >3snv_A Symfoil-4T/permutation #1 synthetic protein; beta-trefoil, de novo protein; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=83.55 E-value=18 Score=31.41 Aligned_cols=69 Identities=13% Similarity=0.172 Sum_probs=50.7
Q ss_pred ceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEE-eeCCcEEEeecCCCeEEEeccC
Q 046395 18 TQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFR-LSNKQFIGLENQGNKLVAVSAT 91 (535)
Q Consensus 18 ~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~a~~~~ 91 (535)
..|+|+++..|.|||-..-| .|.+.+..- +.=--+++...+.....++ +..+.||+++. .|.+.+++..
T Consensus 51 G~V~I~gv~sg~yL~m~~~G--~v~Gs~~~~--~ec~flE~~~e~~g~v~i~~~~sg~Ylamnk-~Grl~Gs~~~ 120 (143)
T 3snv_A 51 GEVLLKSTETGQYLRINPDG--TVDGTRDRS--DTHIQFQISPEGNGEVLLKSTETGQYLRINP-DGTVDGTRDR 120 (143)
T ss_dssp TEEEEEETTTTEEEEECTTS--BEEEECCTT--CTTSEEEEEECSTTEEEEEETTTCCEEEECT-TSBEEEESCT
T ss_pred CeEEEEEEcccEEEeECCCC--CEeecccCC--CcceEEEEEecCCcEEEEEEeeCCEEEEEcC-CCcCcCcCCC
Confidence 37999999999999997655 566666644 3322234666677888888 45899999998 7788887653
|
| >1iv8_A Maltooligosyl trehalose synthase; beta alpha barrel, intramolecular transglucosylation, isomerase; HET: MLZ MLY; 1.90A {Sulfolobus acidocaldarius} SCOP: b.71.1.1 c.1.8.1 | Back alignment and structure |
|---|
Probab=82.96 E-value=1.9 Score=47.73 Aligned_cols=56 Identities=14% Similarity=0.277 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCCEEEeC-CccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 184 EDFKFMSQNGLNAVRIP-VGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRip-v~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
+.++.|+++|+++|=|+ |. ... +.....|+ -+..+.++++|+.|+++||+||+|+=
T Consensus 21 ~~LdYLk~LGVtaIwLsPi~-~~~--~gs~hGYdv~Dy~~Idp~lGt~edfk~LV~aaH~~GIkVIlDvV 87 (720)
T 1iv8_A 21 DNLWYFXDLGVSHLYLSPVL-MAS--PGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDIV 87 (720)
T ss_dssp HTHHHHHHHTCCEEEECCCE-EEC--TTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHhCCCCEEEECCcc-cCC--CCCCCCCCCccCCCcCccCCCHHHHHHHHHHHHHCCCEEEEEec
Confidence 56789999999999873 32 110 10011121 14689999999999999999999993
|
| >3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene} | Back alignment and structure |
|---|
Probab=82.81 E-value=5.9 Score=34.78 Aligned_cols=83 Identities=16% Similarity=0.254 Sum_probs=55.3
Q ss_pred ceeEEEEeecCcEEEEecC---CCceEEeccCCCCCCCCceeEEEEecCCeEEEEe-eCCcEEEeecC---CC-eEEEec
Q 046395 18 TQVQLISTKLKKYLTAENG---SETILMANHNSSSTSSWQTFRLWRINETFYNFRL-SNKQFIGLENQ---GN-KLVAVS 89 (535)
Q Consensus 18 ~~~~~~~~~~~~~~~a~~~---g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~-~~~~~v~~~~~---~~-~~~a~~ 89 (535)
...+|++...|+.|.+..+ .|+.|+.-.-.. +.-..|++-..+++.|.|+. ..++.+.+.+. +| .|+-..
T Consensus 74 g~y~i~~~~sg~cLdv~~~~~~~G~~v~~~~c~~--~~~Q~W~~~~~g~g~~~i~~~~sg~cLdv~~~~~~~G~~v~~~~ 151 (165)
T 3pg0_A 74 GYYKLVARHSGKALDVENASTSDGANVIQYSYSG--GDNQQWRLVDLGDGYYKLVARHSGKALDVENASTSDGANVIQYS 151 (165)
T ss_dssp TEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCC--CGGGCEEEEECSSSCEEEEETTTCCEEEEGGGCCSTTCBEEEEC
T ss_pred CEEEEEECCCCCEEEeCCCCCCCCCEEEEEcCCC--CCccEEEEEECCCCEEEEEECCCCcEEEcCCCCCCCCCEEEEeC
Confidence 3456777778888876543 355666554444 55677788887789999996 47787777542 22 366555
Q ss_pred cCCCCCCceEEEe
Q 046395 90 ATEKFPEPFQITR 102 (535)
Q Consensus 90 ~~~~~~e~f~~~~ 102 (535)
..-+..+.|.|++
T Consensus 152 c~g~~nQ~W~~~~ 164 (165)
T 3pg0_A 152 YSGGDNQQWRLVD 164 (165)
T ss_dssp CCCCGGGCEEEEE
T ss_pred CCCCccceEEEEE
Confidence 5567788887765
|
| >2cf2_C Fatty acid synthase, DH domain; transferase, fatty acid metabolism, fatty acid biosynthesis, multienzyme; 4.30A {Sus scrofa} SCOP: d.38.1.2 | Back alignment and structure |
|---|
Probab=82.43 E-value=0.53 Score=47.59 Aligned_cols=18 Identities=0% Similarity=-0.134 Sum_probs=16.8
Q ss_pred CceEEEecCCccCCccccC
Q 046395 509 KREDGIKNLKEFGDDYYRP 527 (535)
Q Consensus 509 ~~~~~~k~v~~~~~~~f~~ 527 (535)
++++|.|+|+ .||+||+|
T Consensus 223 ~~~~a~~~V~-~~e~fF~G 240 (342)
T 2cf2_C 223 GYVEAELDIN-PDLWFFGC 240 (342)
T ss_pred cEEEEEEEeC-CCcchhcC
Confidence 4899999999 99999997
|
| >1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A | Back alignment and structure |
|---|
Probab=81.87 E-value=1.4 Score=48.21 Aligned_cols=56 Identities=18% Similarity=0.258 Sum_probs=39.3
Q ss_pred HHHHHHHH-cCCCEEEe-CCcccc---ccCCCC----CCCCccchHHHHHHHHHHHHHcC--C--EEEEec
Q 046395 184 EDFKFMSQ-NGLNAVRI-PVGWWI---AYDPKP----PKPFVGGSLQALDNAFRWAQKYG--M--KVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~-~G~N~VRi-pv~~w~---~~~p~~----~~~~~~~~l~~ld~~i~~a~~~G--i--~VIldl 241 (535)
+-++.||+ +|+|+|=| ||.-.. ..++.. ...| +..+.|+++|+.|+++| | +||||+
T Consensus 195 ~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~--Gt~~dfk~LV~~~H~~G~~I~~~VIlD~ 263 (637)
T 1ji1_A 195 QKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAF--GDNSTLQTLINDIHSTANGPKGYLILDG 263 (637)
T ss_dssp HTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTT--CCHHHHHHHHHHHHCSSSSSCCEEEEEE
T ss_pred HhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhcccc--CCHHHHHHHHHHHHhCCCCccceEEEEE
Confidence 45789999 99999987 442100 011100 0001 46899999999999999 9 999999
|
| >3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A | Back alignment and structure |
|---|
Probab=81.17 E-value=2.6 Score=48.43 Aligned_cols=57 Identities=21% Similarity=0.279 Sum_probs=39.9
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccC-----C-C-CC----CCC------c--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYD-----P-K-PP----KPF------V--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~-----p-~-~~----~~~------~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.+..|+++|+++|=| ||.- ...+ + . .| ..| . -+..+.|+++|+.|+++||+||||+
T Consensus 690 ~kldyLk~LGVtaIwL~Pi~~-~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~GI~VIlDv 766 (1039)
T 3klk_A 690 QNADLFKSWGITTFELAPQYN-SSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKAGLQAIADW 766 (1039)
T ss_dssp HTHHHHHHTTCCEEECCCCSC-BCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHcCCCEEEECcccc-CCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5589999999999988 4421 1100 0 0 00 011 1 1468999999999999999999999
|
| >3hje_A 704AA long hypothetical glycosyltransferase; trehalose biosynthesis, maltooligoside trehalose synthase (M family 13 glycoside hydrolases; 1.90A {Sulfolobus tokodaii str} | Back alignment and structure |
|---|
Probab=80.23 E-value=2.2 Score=46.87 Aligned_cols=58 Identities=12% Similarity=0.181 Sum_probs=40.8
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
.+.++.|+++|+++|=|+=.+... +.....|+ -+..+.++++|+.|+++||+||+|+-
T Consensus 18 ~~~LdyL~~LGvt~V~LsPi~e~~--~~s~~GYd~~Dy~~vdp~lGt~edfk~LV~~aH~~GI~VilDvV 85 (704)
T 3hje_A 18 RNRLDYFVELGVTHLYLSPVLKAR--PGSTHGYDVVDYNTINDELGGEEEYIRLIDEAKSKGLGIIQDIV 85 (704)
T ss_dssp HTTHHHHHHHTCSEEEECCCEEES--TTCSSSCSEEEEEEECGGGTHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECCCccCC--CCCCCCCCCcCCCCcCccCCCHHHHHHHHHHHHHCCCEEEEeec
Confidence 456789999999999984222111 10111121 14689999999999999999999983
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 535 | ||||
| d1h4pa_ | 408 | c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yea | 7e-59 | |
| d2pb1a1 | 394 | c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast | 6e-58 | |
| d1ceoa_ | 340 | c.1.8.3 (A:) Endoglucanase CelC {Clostridium therm | 3e-35 | |
| d1edga_ | 380 | c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellu | 5e-26 | |
| d1vjza_ | 325 | c.1.8.3 (A:) Endoglucanase homologue TM1752 {Therm | 7e-26 | |
| d1ecea_ | 358 | c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellul | 1e-24 | |
| d1h1na_ | 305 | c.1.8.3 (A:) Endocellulase EngI {Thermoascus auran | 1e-24 | |
| d1ur4a_ | 387 | c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus lichen | 2e-20 | |
| d1g01a_ | 357 | c.1.8.3 (A:) Alkaline cellulase K catalytic domain | 1e-17 | |
| d1bqca_ | 302 | c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca | 5e-16 | |
| d7a3ha_ | 300 | c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradh | 2e-15 | |
| d1wkya2 | 297 | c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JA | 1e-14 | |
| d1rh9a1 | 370 | c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycoper | 5e-14 | |
| d1qnra_ | 344 | c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [T | 3e-13 | |
| d1kwga2 | 393 | c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus t | 3e-13 | |
| d1egza_ | 291 | c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysant | 5e-13 | |
| d2c0ha1 | 350 | c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue | 7e-13 | |
| d1dfca3 | 123 | b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens | 3e-12 | |
| d1tvna1 | 293 | c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalter | 7e-12 | |
| d1uuqa_ | 410 | c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [Ta | 4e-10 | |
| d1hcda_ | 118 | b.42.5.2 (A:) Histidine-rich actin-binding protein | 6e-10 | |
| d1dfca1 | 133 | b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens | 7e-09 | |
| d2vzsa5 | 339 | c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolato | 1e-08 | |
| d1dfca4 | 111 | b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens | 2e-07 | |
| d1qoxa_ | 449 | c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulan | 8e-07 | |
| d1foba_ | 334 | c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergi | 2e-06 | |
| d1hjsa_ | 332 | c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heter | 4e-06 | |
| d1gnxa_ | 464 | c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. | 8e-06 | |
| d1e4ia_ | 447 | c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa | 1e-05 | |
| d2j78a1 | 443 | c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga m | 3e-05 | |
| d1ug6a_ | 426 | c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophi | 3e-05 | |
| d1v02a_ | 484 | c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) { | 1e-04 | |
| d1tg7a5 | 354 | c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-ter | 1e-04 | |
| d1cbga_ | 490 | c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) { | 2e-04 | |
| d1wcga1 | 462 | c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid ( | 7e-04 | |
| d1qvba_ | 481 | c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermospha | 0.002 | |
| d1vema2 | 417 | c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus | 0.003 |
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 408 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 198 bits (505), Expect = 7e-59
Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 45/352 (12%)
Query: 135 PSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGL 194
PS +E + N + EY G D A ++ HW ++ E+DF ++ G
Sbjct: 30 PSLFEAFRTNDDNDEGIPVD--EYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGF 87
Query: 195 NAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS 254
N VRIP+G+W G LD A WA+ +KV VDLH SQNG +S
Sbjct: 88 NLVRIPIGYWAFQILDDDPYVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNS 147
Query: 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADH---PSLVAIELMNEPKAPDLKLDS-LKTY 310
G RD ++ DS++ T+ +++++ +Y+ ++ IEL+NEP P L +D Y
Sbjct: 148 GLRDSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIGIELINEPLGPVLDMDKMKNDY 207
Query: 311 YKAGYDTVRKYSSSAYVIL---SNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKM 367
Y+ +R S VI+ + + W + ++ V ID H Y +F + +
Sbjct: 208 LAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLER 267
Query: 368 SVQQNIDY---------------IYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGAS-- 410
S+ ++I + + ++ L + + F + W +
Sbjct: 268 SIDEHIKVACEWGTGVLNESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSS 327
Query: 411 ------------------KRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
K + +R+ EAQLD + GW W YK S +
Sbjct: 328 YIGSCANNDDIAYWSDERKENTRRYVEAQLDAF-EMRGGWIIWCYKTESSLE 378
|
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} Length = 394 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Score = 195 bits (497), Expect = 6e-58
Identities = 91/324 (28%), Positives = 153/324 (47%), Gaps = 38/324 (11%)
Query: 157 EYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV 216
EY T G + A ++++ HW ++ITE+DFK +S GLN VRIP+G+W A+ P+V
Sbjct: 45 EYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYW-AFQLLDNDPYV 103
Query: 217 GGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276
G +Q L+ A WA+K ++V +DLH SQNG +SG RD + + + Q T+ +++
Sbjct: 104 QGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDSYNFQNGDNTQVTLNVLN 163
Query: 277 FLASRYADHPS---LVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333
+ +Y + ++ IEL+NEP P L +D LK ++ GY+++R+ S VI+ +
Sbjct: 164 TIFKKYGGNEYSDVVIGIELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAF 223
Query: 334 GGE--WSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD 391
W+ L+ A VV+D H Y +F ++ +I + +
Sbjct: 224 QVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNINDHISVACNWGWDAKKESHWNV 283
Query: 392 ----------------------------GPLSFVGEWSCEWEAEGAS---KRDYQRFAEA 420
++G + S K D +R+ EA
Sbjct: 284 AGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTDTRRYIEA 343
Query: 421 QLDVYGRATFGWAYWAYKFAESPQ 444
QLD + T GW +W++K +P+
Sbjct: 344 QLDAF-EYTGGWVFWSWKTENAPE 366
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} Length = 340 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Score = 133 bits (334), Expect = 3e-35
Identities = 53/308 (17%), Positives = 114/308 (37%), Gaps = 42/308 (13%)
Query: 167 DKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNA 226
+ ++H+ ++ITE+D + +++ G + VR+P + I + L +D
Sbjct: 15 SQYQVFSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRC 74
Query: 227 FRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHP 286
W +KY + +++D+H + + + + + V I FLA RY +
Sbjct: 75 LEWCKKYNLGLVLDMHHAPGYRFQDFKTST----LFEDPNQQKRFVDIWRFLAKRYINER 130
Query: 287 SLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFA-S 345
+A EL+N+ PD +R+ S+ ++ + EL + A
Sbjct: 131 EHIAFELLNQVVEPD--STRWNKLMLECIKAIREIDSTMWLYIGGNNYNSPDELKNLADI 188
Query: 346 NLSRVVIDVHFYNLF-----WDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW 400
+ +V + HFYN F ++++ ++ N Y + + ++ SF+ E
Sbjct: 189 DDDYIVYNFHFYNPFFFTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMEL 248
Query: 401 SCEWEAEGASKRDYQ------------------------------RFAEAQLDVYGRATF 430
+ + ++D + ++ E + +
Sbjct: 249 NNLKLNKELLRKDLKPAIEFREKKKCKLYCGEFGVIAIADLESRIKWHEDYISLLEEYDI 308
Query: 431 GWAYWAYK 438
G A W YK
Sbjct: 309 GGAVWNYK 316
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Score = 107 bits (267), Expect = 5e-26
Identities = 45/295 (15%), Positives = 86/295 (29%), Gaps = 44/295 (14%)
Query: 178 KSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKV 237
T++ + Q G N VRIPV W + + + M V
Sbjct: 59 GIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSG-SDYKISDVWMNRVQEVVNYCIDNKMYV 117
Query: 238 IVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEP 297
I++ H G S ++ S + ++ +A+R+A++ + E MNEP
Sbjct: 118 ILNTHHDVDKVKGYFPSS------QYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEP 171
Query: 298 ---------------KAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLS 342
++ + + +TVR G S +
Sbjct: 172 RLVGHANEWWPELTNSDVVDSINCINQLNQDFVNTVRATGGKNASRYLMCPGYVASPDGA 231
Query: 343 FASNL----------SRVVIDVHFYNLFWDNFNKMSVQQNIDYIY---------RQRSSD 383
+++++ VH Y + M+ + +
Sbjct: 232 TNDYFRMPNDISGNNNKIIVSVHAYCPWNFAGLAMADGGTNAWNINDSKDQSEVTWFMDN 291
Query: 384 LRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYK 438
+ N TS G +GE + ++ +Y + AQ G W
Sbjct: 292 IYNKYTSRGIPVIIGECGAVDKNNLKTRVEYMSYYVAQAKARG---ILCILWDNN 343
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Score = 105 bits (263), Expect = 7e-26
Identities = 44/283 (15%), Positives = 86/283 (30%), Gaps = 21/283 (7%)
Query: 173 MRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQK 232
EEDF +M+Q N VRIP+ + D P + +D W +K
Sbjct: 13 FSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEK 72
Query: 233 YGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIE 292
YG+ + + LH + + + + + ++
Sbjct: 73 YGIHICISLHRAPGYSVNKEVEEKTNLW-KDETAQEAFIHHWSFIARRYKGISSTHLSFN 131
Query: 293 LMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVI 352
L+NEP PD ++ S++ + T+ + L G + + + V
Sbjct: 132 LINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLIIIDGLGYGNIPVDDLTIENTVQ 191
Query: 353 DVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD-----------------GPLS 395
Y F K + D+ + + + G
Sbjct: 192 SCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLTWIKLRQKGIEV 251
Query: 396 FVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYK 438
F GE + ++ E L+++ G+A W ++
Sbjct: 252 FCGEMGAYNKTPHD---VVLKWLEDLLEIFKTLNIGFALWNFR 291
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} Length = 358 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Score = 103 bits (256), Expect = 1e-24
Identities = 48/307 (15%), Positives = 97/307 (31%), Gaps = 39/307 (12%)
Query: 161 TNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVG--- 217
N +G + ++ W + G N +R+P I P
Sbjct: 26 INWFGFETCNYVVHGLWSRDY-RSMLDQIKSLGYNTIRLPYSDDILKPGTMPNSINFYQM 84
Query: 218 -------GSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQE 270
SLQ +D +A + G+++I+D H P + S
Sbjct: 85 NQDLQGLTSLQVMDKIVAYAGQIGLRIILDRH--------RPDCSGQSALWYTSSVSEAT 136
Query: 271 TVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDS-----LKTYYKAGYDTVRKYSSSA 325
++ + LA RY +P++V +L NEP P + + + V + +
Sbjct: 137 WISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNL 196
Query: 326 YVIL-----SNRLGGEWSELLSFASNL-------SRVVIDVHFYNLFWDNFNKMSVQQNI 373
+ + N W L A +R+V H Y S
Sbjct: 197 LIFVEGVQSYNGDSYWWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFP 256
Query: 374 DYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGAS--KRDYQRFAEAQLDVYGRATFG 431
+ + + + + + ++GE+ ++ + ++ YG +F
Sbjct: 257 NNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQSTTDQTWLKTLVQYLRPTAQ-YGADSFQ 315
Query: 432 WAYWAYK 438
W +W++
Sbjct: 316 WTFWSWN 322
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Score = 101 bits (253), Expect = 1e-24
Identities = 39/283 (13%), Positives = 84/283 (29%), Gaps = 32/283 (11%)
Query: 164 YGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQAL 223
+G + + + + G+N R+P L L
Sbjct: 16 FGSQNLPGVEGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADL 74
Query: 224 DNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYA 283
+ G +VD H + + S + +AS++A
Sbjct: 75 IATVNAITQKGAYAVVDPH-------------NYGRYYNSIISSPSDFETFWKTVASQFA 121
Query: 284 DHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL--------SNRLGG 335
+P LV + NE D+ + +A D +R +++ I +
Sbjct: 122 SNP-LVIFDTDNEYH--DMDQTLVLNLNQAAIDGIRSAGATSQYIFVEGNSWTGAWTWTN 178
Query: 336 EWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLS 395
+ S +++ ++H Y + + S I ++R + ++G
Sbjct: 179 VNDNMKSLTDPSDKIIYEMHQYLDS--DGSGTSATCVSSTIGQERITSATQWLRANGKKG 236
Query: 396 FVGEWSC-EWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAY 437
+GE++ + + DV+ G +WA
Sbjct: 237 IIGEFAGGADNVCETAITGMLDYMAQNTDVW----TGAIWWAA 275
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Length = 387 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Score = 91.1 bits (225), Expect = 2e-20
Identities = 39/287 (13%), Positives = 80/287 (27%), Gaps = 26/287 (9%)
Query: 173 MRDHWKSY-----ITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAF 227
+ + ++ ++ FK + + G+N VR+ + L+
Sbjct: 26 LEESGVAFYNESGKKQDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIG 85
Query: 228 RWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVA-IIDFLASRYADHP 286
+ A GMK++ D H + + + + L + A
Sbjct: 86 KRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFEDKKTALYQYTKQSLKAMKAAGI 145
Query: 287 SLVAIELMNEPKAPDL---KLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSF 343
+ +++ NE + + AG VR+ S+ V L
Sbjct: 146 DIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWI 205
Query: 344 ASNLSRVVIDVHFYNL----FWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGE 399
A L R +D + FW ++ + + + TS + G+
Sbjct: 206 AETLHRHHVDYDVFASSYYPFWHGTL-KNLTSVLTSVADTYGKKVMVAETSYTYTAEDGD 264
Query: 400 WSCEWEAEGASKRDY-----------QRFAEAQLDVYGRATFGWAYW 435
+ + + +A DV G YW
Sbjct: 265 GHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGI-GVFYW 310
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Score = 82.2 bits (202), Expect = 1e-17
Identities = 41/275 (14%), Positives = 80/275 (29%), Gaps = 35/275 (12%)
Query: 177 WKSYITEEDFKFMSQN-GLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGM 235
+ + E F +S + G N +R+ + P+ + A ++ M
Sbjct: 48 FGEIVNENAFVALSNDWGSNMIRLAMYIGENGYATNPE-----VKDLVYEGIELAFEHDM 102
Query: 236 KVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSL--VAIEL 293
VIVD H + + +A Y DHP + EL
Sbjct: 103 YVIVDWH--------------VHAPGDPRADVYSGAYDFFEEIADHYKDHPKNHYIIWEL 148
Query: 294 MNEPKAPDLKLDS----------LKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSF 343
NEP + +K Y + + +R+ + ++ +
Sbjct: 149 ANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGDNMILVGNPNWSQRPDLSADN 208
Query: 344 ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCE 403
+ ++ VHFY + + +++R + + F EW
Sbjct: 209 PIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVMANVRYALDNGVAV-FATEWG-- 265
Query: 404 WEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYK 438
Y A+ L+ + WA W+
Sbjct: 266 TSQANGDGGPYFDEADVWLNFLNKHNISWANWSLT 300
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Score = 76.8 bits (188), Expect = 5e-16
Identities = 37/278 (13%), Positives = 81/278 (29%), Gaps = 51/278 (18%)
Query: 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH 242
+ F + +G N VR+ + + + P + N ++ + ++++H
Sbjct: 35 TQAFADIKSHGANTVRVVLSNGVRWSKNGPSD--------VANVISLCKQNRLICMLEVH 86
Query: 243 ALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD- 301
S S + + V L S V I + NEP D
Sbjct: 87 DTTGYGEQSGA------------STLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDS 134
Query: 302 LKLDSLKTYYKAGYDTVRKYSSSAYVIL-SNRLGGEWSELLS-------FASNLSRVVID 353
+ + T A +R +++ + G +W+ + + V
Sbjct: 135 ATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNTMRNNADQVYASDPTGNTVFS 194
Query: 354 VHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRD 413
+H Y ++ +++ PL +GE+ G D
Sbjct: 195 IHMY---GVYSQASTITSYLEHFVNA-----------GLPL-IIGEF-------GHDHSD 232
Query: 414 YQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSS 451
+ + R G+ W++ + L +
Sbjct: 233 GNPDEDTIMAEAERLKLGYIGWSWSGNGGGVEYLDMVY 270
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Score = 74.5 bits (182), Expect = 2e-15
Identities = 51/281 (18%), Positives = 96/281 (34%), Gaps = 42/281 (14%)
Query: 176 HWKSYITEEDFKFMSQN-GLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYG 234
+ ++ E K++ + G+N R + P + + A A
Sbjct: 36 WYGQFVNYESMKWLRDDWGINVFRAAMYTSSGGYIDDP-----SVKEKVKEAVEAAIDLD 90
Query: 235 MKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELM 294
+ VI+D H L + +E D ++ Y D+P+ V E+
Sbjct: 91 IYVIIDWHILS---------------DNDPNIYKEEAKDFFDEMSELYGDYPN-VIYEIA 134
Query: 295 NEPKAPDLKL-DSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVID 353
NEP D+ + +K Y + +R + +I G WS+ + A++ +
Sbjct: 135 NEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIII---VGTGTWSQDVHHAADNQLADPN 191
Query: 354 VHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWS-CEWEAEGASKR 412
V + F+ + +++ +DY Q G FV EW +G
Sbjct: 192 VMYAFHFYAGTHGQNLRDQVDYALDQ------------GAAIFVSEWGTSAATGDGGVFL 239
Query: 413 DYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSST 453
D A+ +D WA W+ + AL ++
Sbjct: 240 DE---AQVWIDFMDERNLSWANWSLTHKDESSAALMPGANP 277
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Score = 72.3 bits (176), Expect = 1e-14
Identities = 35/276 (12%), Positives = 73/276 (26%), Gaps = 38/276 (13%)
Query: 177 WKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK 236
W + ++ G N VRI + + +Q + N A+ +
Sbjct: 29 WYKDQATTAIEGIANTGANTVRIVLSDGGQWTK--------DDIQTVRNLISLAEDNNLV 80
Query: 237 VIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNE 296
++++H D S + + V + S V I + NE
Sbjct: 81 AVLEVH---------------DATGYDSIASLNRAVDYWIEMRSALIGKEDTVIINIANE 125
Query: 297 PKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHF 356
+ YK +R + +++ W + + R V +
Sbjct: 126 WFGSW-DGAAWADGYKQAIPRLRNAGLNNTLMID---AAGWGQFPQSIHDYGREVFNADP 181
Query: 357 YNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQR 416
+ + R + N +GE+ +
Sbjct: 182 QRNTMFSIHMYEYAGGNASQVRTNIDRVLN----QDLALVIGEFGHRHT-------NGDV 230
Query: 417 FAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSS 452
+ + GW W++K + L LS+
Sbjct: 231 DESTIMSYSEQRGVGWLAWSWKGNGPEWEYLDLSND 266
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Score = 71.3 bits (173), Expect = 5e-14
Identities = 42/293 (14%), Positives = 83/293 (28%), Gaps = 37/293 (12%)
Query: 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGG--SLQALDNAFRWAQKYGMKVIVD 240
F+ S+ +N R P P V Q LD A+KYG+ +I+
Sbjct: 42 TNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGVYNEQMFQGLDFVISEAKKYGIHLIMS 101
Query: 241 LHALRVSQNGS----PHSGSRDGFQEWSDSDIQETVAIIDFLA--------------SRY 282
L + G + R D + + Y
Sbjct: 102 LVNNWDAFGGKKQYVEWAVQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAY 161
Query: 283 ADHPSLVAIELMNEPKAPDLK-LDSLKTYYKAGYDTVRKYSSSAYVIL----------SN 331
D P++++ EL+NEP+ P + + + ++ S+ + +
Sbjct: 162 KDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLKSIDSNHLLEIGLEGFYGNDMRQ 221
Query: 332 RLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD 391
+ +F SN ID +++ + + Q+ D Q + +
Sbjct: 222 YNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLPGLTQEAQDKWASQWIQVHIDDSKML 281
Query: 392 GPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRA------TFGWAYWAYK 438
+ E+ + G + + E G +W
Sbjct: 282 KKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVL 334
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} Length = 344 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Score = 68.9 bits (167), Expect = 3e-13
Identities = 50/297 (16%), Positives = 93/297 (31%), Gaps = 50/297 (16%)
Query: 176 HWKSYIT-----EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGG------------ 218
+W S++T + F +S +GL VR+ + P P + +
Sbjct: 27 YWCSFLTNHADVDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGA 86
Query: 219 -SLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSD----IQETVA 273
LQ LD + A+++ +K+I+ G + G + +
Sbjct: 87 DGLQTLDYVVQSAEQHNLKLIIPFVNNWSDYGGINAYVNAFGGNATTWYTNTAAQTQYRK 146
Query: 274 IIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVIL---- 329
+ + SRYA+ ++ A EL NEP+ D + + + V+ S+ V L
Sbjct: 147 YVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDSNHLVTLGDEG 206
Query: 330 ------SNRLGGEWSELLSFASNLSRVVIDV---HFYNLFWDNFNKMSVQQNIDYIYRQR 380
+ E FA N+ +D H Y W +
Sbjct: 207 LGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGTNYTWGNGWIQTHAAACL 266
Query: 381 SSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAY 437
++ P E+ A+ + + L G G +W +
Sbjct: 267 AAGK--------PC-----VFEEYGAQQNPCTNEAPWQTTSLTTRGMG--GDMFWQW 308
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Score = 68.9 bits (167), Expect = 3e-13
Identities = 43/244 (17%), Positives = 79/244 (32%), Gaps = 20/244 (8%)
Query: 174 RDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKY 233
+HW +ED + M + GL+ VRI W +P+P + LD A
Sbjct: 8 PEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRL----EWGWLDEAIATLAAE 63
Query: 234 GMKVIVDLHA--------------LRVSQNGSPHS-GSRDGFQEWSDSDIQETVAIIDFL 278
G+KV++ L V + G G R + S +E I+ L
Sbjct: 64 GLKVVLGTPTATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLL 123
Query: 279 ASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWS 338
A RY ++ + NE D +A + + + WS
Sbjct: 124 AERYGGLEAVAGFQTDNEYGCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWS 183
Query: 339 ELLSFASNLSRVVIDVHFYNL-FWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFV 397
+ + + + V N ++ + + Q + Q + +F+
Sbjct: 184 QRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFNRLQVEILRAHAPGKFVTHNFM 243
Query: 398 GEWS 401
G ++
Sbjct: 244 GFFT 247
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Score = 67.5 bits (164), Expect = 5e-13
Identities = 42/280 (15%), Positives = 83/280 (29%), Gaps = 45/280 (16%)
Query: 180 YITEEDFKFMSQN-GLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
+ T + + ++ + VR +G + G+ ++ A M I
Sbjct: 38 FYTADTVASLKKDWKSSIVRAAMGVQESGGYLQDPA---GNKAKVERVVDAAIANDMYAI 94
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298
+ H ++++ E + +A +Y + P+ V E+ NEP
Sbjct: 95 IGWH------------------SHSAENNRSEAIRFFQEMARKYGNKPN-VIYEIYNEPL 135
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVIL-SNRLGGEWSELLSFASNLSRVVIDVHFY 357
+++K Y +A +R +I+ + E N + +HFY
Sbjct: 136 QVS-WSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQNVDEASRDPINAKNIAYTLHFY 194
Query: 358 NLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWS-CEWEAEGASKRDYQR 416
+ S++ ++G FV EW + G Q
Sbjct: 195 ----AGTHGESLRNKARQAL------------NNGIALFVTEWGTVNADGNGGV---NQT 235
Query: 417 FAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSS 456
+A + A WA S L+
Sbjct: 236 ETDAWVTFMRDNNISNANWALNDKNEGASTYYPDSKNLTE 275
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Score = 67.4 bits (163), Expect = 7e-13
Identities = 39/335 (11%), Positives = 84/335 (25%), Gaps = 39/335 (11%)
Query: 161 TNGYGPDKAAKLMRDHWKS--YITEEDFKFMSQNGLNAVRIPVGWWIAYDP-----KPPK 213
N + A + + E M +G N+VR+ + P
Sbjct: 21 ANQAWVNYARDFGHNQYSKGKSTFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVT 80
Query: 214 PFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVA 273
+ + AQ++ + + L V Q+ S I +
Sbjct: 81 GIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRLNGLMVDTRKLQSYIDHALK 140
Query: 274 IIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRL 333
+A+ + +L ++MNEP+ +S + A + S +
Sbjct: 141 ---PMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQE 197
Query: 334 GGEWSELLSFA--SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSD 391
G + + A ++ V +N+ D D+ + +
Sbjct: 198 IGRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFY 257
Query: 392 GPLSFVGEWS----------------------CEWEAEGASKRDYQRFAEAQLDVYGRAT 429
++ + E+ E + + E
Sbjct: 258 QVHTYDWQNHFGNESPFKHSFSNFRLKKPMVIGEFNQEHGAGMSSESMFEWAYTKGYSGA 317
Query: 430 FGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVT 464
+ W+ + + L S QV
Sbjct: 318 WTWSRTDVSWNNQLR-----GMQHLKSRTDHGQVQ 347
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 123 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.5 bits (149), Expect = 3e-12
Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Query: 19 QVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINET-FYNFRLSNKQFIG 77
QV L + ++ ++ G + + N + +TF+L +T FR ++
Sbjct: 3 QVVLQAAN-ERNVSTRQGMD----LSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWT 57
Query: 78 LENQGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKGPST 137
L G + + ++++ F I ++ R+ RASNG F+ +K Q+ A +
Sbjct: 58 LTATGG-VQSTASSKNASCYFDIEWRDR---RITLRASNGKFVTSKKNGQLAASVETAGD 113
Query: 138 WEENDPSVFNMTIV 151
E F M ++
Sbjct: 114 SEL-----FLMKLI 122
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Score = 64.1 bits (155), Expect = 7e-12
Identities = 37/261 (14%), Positives = 72/261 (27%), Gaps = 41/261 (15%)
Query: 180 YITEEDFKFMSQN-GLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI 238
+ T E +R +G G++ LD A M VI
Sbjct: 38 FYTAETVAKAKTEFNATLIRAAIGHG-TSTGGSLNFDWEGNMSRLDTVVNAAIAEDMYVI 96
Query: 239 VDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298
+D H + +D V + +A++Y + + V E+ NEP
Sbjct: 97 IDFH------------------SHEAHTDQATAVRFFEDVATKYGQYDN-VIYEIYNEPL 137
Query: 299 APDLKLDSLKTYYKAGYDTVRKYSSSAYVIL-SNRLGGEWSELLSFASNLSRVVIDVHFY 357
+ +K Y + D +R +++ + + + + + +HF
Sbjct: 138 QISWV-NDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDVDVASQNPIDRANIAYTLHF- 195
Query: 358 NLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRF 417
+ + S + G F EW +
Sbjct: 196 ---YAGTHGQSYRNKAQTALDN------------GIALFATEWG--TVNADGNGGVNINE 238
Query: 418 AEAQLDVYGRATFGWAYWAYK 438
+A + + A WA
Sbjct: 239 TDAWMAFFKTNNISHANWALN 259
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Length = 410 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Score = 59.4 bits (142), Expect = 4e-10
Identities = 41/327 (12%), Positives = 88/327 (26%), Gaps = 54/327 (16%)
Query: 161 TNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGS- 219
N + + + ++ + G+N +R+ + KP V
Sbjct: 23 VNMWYAAYLGAPNEVGDRDRL-AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGF 81
Query: 220 -------LQALDNAFRWAQKYGMKVIVDLHALRVSQNG---------------------S 251
LQ LD K M V++ + G
Sbjct: 82 GNYDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQYMAWIEGEPVQDPNVTNEW 141
Query: 252 PHSGSRDGFQEWSDSDIQETVAIIDFLASRY--------ADHPSLVAIELMNEPKAP--- 300
++ S+ QE ++ + +R D ++++ +L NEP+
Sbjct: 142 EAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQ 201
Query: 301 --DLKLDSLKTYYKAGYDTVRKYSSSAYVIL-SNRLGGEWSELLSFASNLSRVVIDV--- 354
+ + A ++ + V S G +++ F + ID
Sbjct: 202 TTAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTY 261
Query: 355 HFYNLFWDNFNKMSVQQNID---YIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASK 411
H + W F+K + + +V + E+ + + +
Sbjct: 262 HMWIRNWSWFDKTKPAETWPSAWEKAQNYMRAHIDVAKQLNKPLVLEEFGLDRDMGSYAM 321
Query: 412 RDYQRFAEAQLDVYGRATFGWAYWAYK 438
D Y R F + +
Sbjct: 322 DSTT----EYRDNYFRGVFELMLASLE 344
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Score = 54.9 bits (132), Expect = 6e-10
Identities = 11/114 (9%), Positives = 34/114 (29%), Gaps = 12/114 (10%)
Query: 29 KYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAV 88
+L+AE + + F + + +++ + + +
Sbjct: 12 HFLSAEGEA-----VKTHHGHHDHHTHFHVENHGGK-VALKTHCGKYLSIGDHKQ-VYLS 64
Query: 89 SATEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKS--EMQVTADYKGPSTWEE 140
F + G +V + + +++ A + + +T+EE
Sbjct: 65 HHLHGDHSLFHLEHHGG---KVSIKGHHHHYISADHHGHVSTKEHHDHDTTFEE 115
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 133 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.2 bits (125), Expect = 7e-09
Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 12/117 (10%)
Query: 29 KYLTAENGSETILMANHNSSSTSSWQTFRLWRINE----TFYNFRLSNKQFIGLENQGNK 84
KYLTAE + N ++SS Q + L + + R +++ + GN
Sbjct: 15 KYLTAEAFGFKV---NASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGN- 70
Query: 85 LVAVSATEKFPEPFQITRKNGEPHRVRFRA-SNGYFLQAKSEMQVTADYKGPSTWEE 140
+ F I + R ++ ++ + + +++ + S E+
Sbjct: 71 VTCEREVPGPDCRFLIVAHDD--GRWSLQSEAHRRYFGGTED-RLSCFAQTVSPAEK 124
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Score = 54.5 bits (130), Expect = 1e-08
Identities = 34/282 (12%), Positives = 66/282 (23%), Gaps = 32/282 (11%)
Query: 163 GYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQA 222
GY PD + + K++ GLN VR +P
Sbjct: 27 GYTPDLFLRWNETAA-----ADKLKYVLNLGLNTVR----LEGHIEP------------- 64
Query: 223 LDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRY 282
D F A G+ + + + W +SD A + A R
Sbjct: 65 -DEFFDIADDLGVLTMPGWECCDK---WEGQVNGEEKGEPWVESDYPIAKASMFSEAERL 120
Query: 283 ADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLS 342
DHPS+++ + ++ KA D + + ++ +
Sbjct: 121 RDHPSVISFHIGSDFAPDRRIEQGYLDAMKA-ADFLLPVIPA-----ASARPSPITGASG 174
Query: 343 FASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSC 402
N + ++ + N + + + W
Sbjct: 175 MKMNGPYDYVPPVYWYDKSQKDRGGAWSFNSETSAGVDIPTMDTLKRMMSASELDTMWKN 234
Query: 403 EWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQ 444
+ +G + F Q
Sbjct: 235 PSAKQYHRSSSDTFGNLKLFGDALTKRYGASANLNDFVRKAQ 276
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} Length = 111 | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.1 bits (112), Expect = 2e-07
Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 14/119 (11%)
Query: 21 QLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLEN 80
++ ++ + T L AN SS+ F+L N+ YN + S ++ + +
Sbjct: 3 IIVFRGEHGFIGCRKVTGT-LDANR-----SSYDVFQL-EFNDGAYNIKDSTGKYWTVGS 55
Query: 81 QGNKLVAVSATEKFPEPFQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKGPSTWE 139
AV+++ P F + G +L+ + A +
Sbjct: 56 DS----AVTSSGDTPVDFFFEFCDY---NKVAIKVGGRYLKGDHAGVLKASAETVDPAS 107
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} Length = 449 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Score = 49.0 bits (116), Expect = 8e-07
Identities = 32/282 (11%), Positives = 67/282 (23%), Gaps = 29/282 (10%)
Query: 125 EMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEE 184
E D +G S W+ F H ++ NG + A D + EE
Sbjct: 21 EGAYNEDGRGMSIWD-----TFA-------HTPGKVKNGDNGNVAC----DSYHRV--EE 62
Query: 185 DFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL 244
D + + G+ R + W P+ L G++ L+
Sbjct: 63 DVQLLKDLGVKVYRFSISWPRVL-PQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHW 121
Query: 245 RVSQNGSPHSGSRDGFQEWSDSDIQET-VAIIDFLASRYADHPSLVAIELMNEPKAPDLK 303
+ Q G W + + + NEP
Sbjct: 122 DLPQALQDQGG-------WGSRITIDAFAEYAELMFKELGGKIKQWIT--FNEPWCMAFL 172
Query: 304 LDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDN 363
+ L + D S ++++++ L + +
Sbjct: 173 SNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGIAPNTSWAVPYRRTK 232
Query: 364 FNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWE 405
+ + + + + L + +
Sbjct: 233 EDMEACLRVNGWSGDWYLDPIYFGEYPKFMLDWYENLGYKPP 274
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Length = 334 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Score = 47.4 bits (112), Expect = 2e-06
Identities = 33/274 (12%), Positives = 76/274 (27%), Gaps = 44/274 (16%)
Query: 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL 241
T+ ++ G+N++R V W +P L + + GM + +DL
Sbjct: 29 TQALETILADAGINSIRQRV-WV---NPSDGS----YDLDYNLELAKRVKAAGMSLYLDL 80
Query: 242 HALRVSQNGSPHSGSRDGFQEWSDSDIQETVAII----DFLASRYADHPSLVAIELMNEP 297
H + + WS +D+ + + + +A++ + I +
Sbjct: 81 HL----SDTWADPSDQTTPSGWSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNE 136
Query: 298 KAPDLKL----------DSLKTYYKAGYDTVRKYSSSAYVILSNRL--GGEWSELLSFAS 345
L ++ +G V+ + + + L G W + F
Sbjct: 137 --IRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIMIHLDDGWSWDQQNYFYE 194
Query: 346 NL------SRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGE 399
+ D + + ++ L N+ ++ V E
Sbjct: 195 TVLATGELLSTDFDYFGVSYYPFYSASATLASLKT--------SLANLQSTYDKPVVVVE 246
Query: 400 WSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWA 433
+ + + V G+ F
Sbjct: 247 TNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEK 280
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Length = 332 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Score = 46.4 bits (109), Expect = 4e-06
Identities = 35/260 (13%), Positives = 75/260 (28%), Gaps = 23/260 (8%)
Query: 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDL 241
+ ++ NG+N VR V W+ +P +L + A+ G+ V +D
Sbjct: 29 AQPLENILAANGVNTVRQRV--WV--NPADGN----YNLDYNIAIAKRAKAAGLGVYIDF 80
Query: 242 HALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD 301
H + + + + + + +D + + NE +A
Sbjct: 81 HYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGL 140
Query: 302 L-------KLDSLKTYYKAGYDTVRKYSSSAYVILSNRL--GGEWSELLSFASNL--SRV 350
L ++ + ++ S S + L G +W + +N+
Sbjct: 141 LWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYTNVLKQGT 200
Query: 351 VIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGAS 410
+ F + + S + + S L N+ + V E +
Sbjct: 201 LELSDFDMMGVSFYPFYSSSATLSALK----SSLDNMAKTWNKEIAVVETNWPISCPNPR 256
Query: 411 KRDYQRFAEAQLDVYGRATF 430
G+ TF
Sbjct: 257 YSFPSDVKNIPFSPEGQTTF 276
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} Length = 464 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Score = 46.0 bits (108), Expect = 8e-06
Identities = 41/259 (15%), Positives = 75/259 (28%), Gaps = 27/259 (10%)
Query: 125 EMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEE 184
E D + PS W+ + ++ NG D A DH+ + E
Sbjct: 20 EGAAAEDGRTPSIWD-----TYA-------RTPGRVRNGDTGDVAT----DHYHRW--RE 61
Query: 185 DFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL 244
D M++ GL A R + W P P + L G++ + L+
Sbjct: 62 DVALMAELGLGAYRFSLAWPRIQ-PTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHW 120
Query: 245 RVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKL 304
+ Q G + + A D +NEP
Sbjct: 121 DLPQELENAGGW------PERATAERFAEYAAIAADALGDRVKTWTT--LNEPWCSAFLG 172
Query: 305 DSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNF 364
+ D V ++ ++ L + L + A V +++H D+
Sbjct: 173 YGSGVHAPGRTDPVAALRAAHHLNLGHGLAVQALRDRLPADAQCSVTLNIHHVRPLTDSD 232
Query: 365 NKMSVQQNIDYIYRQRSSD 383
+ ID + + +
Sbjct: 233 ADADAVRRIDALANRVFTG 251
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Length = 447 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Score = 45.2 bits (106), Expect = 1e-05
Identities = 36/284 (12%), Positives = 74/284 (26%), Gaps = 29/284 (10%)
Query: 125 EMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEE 184
E D +G S W+ F H ++ NG + A D + Y EE
Sbjct: 21 EGAYQEDGRGLSIWD-----TFA-------HTPGKVFNGDNGNVAC----DSYHRY--EE 62
Query: 185 DFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL 244
D + M + G+ R V W + P L G++ L+
Sbjct: 63 DIRLMKELGIRTYRFSVSWPRIF-PNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHW 121
Query: 245 RVSQNGSPHSGSRDGFQEWSDSDIQETVA-IIDFLASRYADHPSLVAIELMNEPKAPDLK 303
+ Q G W + + + + + NEP
Sbjct: 122 DLPQALQDAGG-------WGNRRTIQAFVQFAETMFREFHGKIQHWLT--FNEPWCIAFL 172
Query: 304 LDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDN 363
+ L + + ++++++ L L + +
Sbjct: 173 SNMLGVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGIAPNVSWAVPYSTSE 232
Query: 364 FNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE 407
+K + + I + + + + E +
Sbjct: 233 EDKAACARTISLHSDWFLQPIYQGSYPQFLVDWFAEQGATVPIQ 276
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} Length = 443 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Score = 44.0 bits (103), Expect = 3e-05
Identities = 44/359 (12%), Positives = 100/359 (27%), Gaps = 34/359 (9%)
Query: 125 EMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEE 184
E AD G S W F+ H + NG D A DH+ + +E
Sbjct: 20 EGSPLADGAGMSIWH-----TFS-------HTPGNVKNGDTGDVAC----DHYNRW--KE 61
Query: 185 DFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL 244
D + + + G+ A R + W P+ L + + G+ V ++
Sbjct: 62 DIEIIEKLGVKAYRFSISWPRIL-PEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHW 120
Query: 245 RVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKL 304
+ G + L + D +NEP +
Sbjct: 121 DLPFALQLKGGW------ANREIADWFAEYSRVLFENFGDRVKNWIT--LNEPWVVAIVG 172
Query: 305 DSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNF 364
+ D + + ++ ++ + + V + +F
Sbjct: 173 HLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKIGIVFNNGYFEPASEKEE 232
Query: 365 NKMSVQQNIDYIYRQRSSD-LRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLD 423
+ +V+ + + + + L F E+ E +D + ++D
Sbjct: 233 DIRAVRFMHQFNNYPLFLNPIYRGDYPELVLEFAREYLPENY------KDDMSEIQEKID 286
Query: 424 VYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHIFSSLNEPNDTDKITPI 482
G + + + + +++ W+ I+ L + + +
Sbjct: 287 FVGLNYYSGHLVKFDPDAPAKVSFVERDLPKTAMGWEIVPEGIYWILKKVKEEYNPPEV 345
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Length = 426 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Score = 44.0 bits (103), Expect = 3e-05
Identities = 37/173 (21%), Positives = 52/173 (30%), Gaps = 27/173 (15%)
Query: 125 EMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEE 184
E D +GPS W+ F I +G + A DH++ Y EE
Sbjct: 17 EGATQEDGRGPSIWD-----AFA-------QRPGAIRDGSTGEPAC----DHYRRY--EE 58
Query: 185 DFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL 244
D M G+ A R V W P+ L D G+ + L+
Sbjct: 59 DIALMQSLGVRAYRFSVAWPRIL-PEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHW 117
Query: 245 RVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEP 297
+ G R S + +A AD A +NEP
Sbjct: 118 DLPLALEERGGWR------SRETAFAFAEYAEAVARALADRVPFFAT--LNEP 162
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} Length = 484 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Score = 42.5 bits (99), Expect = 1e-04
Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 23/155 (14%)
Query: 96 EPFQITRKNGEPHRVRF-RASNGYFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTM 154
P++I R++ P F A++ Y + E D KGPSTW+
Sbjct: 3 SPWEIPRRDWFPPSFLFGAATSAY----QIEGAWNEDGKGPSTWD---------HFCHNF 49
Query: 155 HGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW-WIAYDPKPPK 213
I + D AA D + Y ED + + + G++A R + W I
Sbjct: 50 PE--WIVDRSNGDVAA----DSYHMY--AEDVRLLKEMGMDAYRFSISWPRILPKGTLAG 101
Query: 214 PFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQ 248
++ + + G++ + + Q
Sbjct: 102 GINEKRVEYYNKLIDLLLENGIEPYITIFHWDTPQ 136
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Score = 41.7 bits (97), Expect = 1e-04
Identities = 19/135 (14%), Positives = 43/135 (31%), Gaps = 17/135 (12%)
Query: 174 RDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKY 233
R S + F+ + G N V V W + P + + L F A++
Sbjct: 31 RLPVASLY-IDIFEKVKALGFNCVSFYV-DWALLEGNPGH-YSAEGIFDLQPFFDAAKEA 87
Query: 234 GMKVIV------------DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASR 281
G+ ++ + + S + + + +D+ A I ++
Sbjct: 88 GIYLLARPGPYINAEVSGGGFPGWLQRVDGILRTSDEAYLKATDNYASNIAATI--AKAQ 145
Query: 282 YADHPSLVAIELMNE 296
+ ++ + NE
Sbjct: 146 ITNGGPIILYQPENE 160
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} Length = 490 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Score = 41.3 bits (96), Expect = 2e-04
Identities = 26/120 (21%), Positives = 37/120 (30%), Gaps = 18/120 (15%)
Query: 125 EMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEE 184
E D KGPS W+ T +I + D A D + Y +E
Sbjct: 35 EGAAFEDGKGPSIWD---------TFTHKYPE--KIKDRTNGDVAI----DEYHRY--KE 77
Query: 185 DFKFMSQNGLNAVRIPVGWW-IAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA 243
D M L+A R + W + K + +N GM+ V L
Sbjct: 78 DIGIMKDMNLDAYRFSISWPRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFH 137
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} Length = 462 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Score = 39.8 bits (92), Expect = 7e-04
Identities = 23/131 (17%), Positives = 38/131 (29%), Gaps = 17/131 (12%)
Query: 125 EMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEE 184
E D KG + W+ +V T I +G D A D + Y +E
Sbjct: 19 EGGWNEDGKGENIWD---------RLVHTSPEV--IKDGTNGDIAC----DSYHKY--KE 61
Query: 185 DFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL 244
D + L R + W + +N K + +V ++
Sbjct: 62 DVAIIKDLNLKFYRFSISWARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHW 121
Query: 245 RVSQNGSPHSG 255
+ Q G
Sbjct: 122 DLPQYLQDLGG 132
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} Length = 481 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Score = 38.3 bits (88), Expect = 0.002
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 14/79 (17%)
Query: 125 EMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEE 184
E + S W V+ +T G + +G P+ +W +
Sbjct: 19 EAGIPGSEDPNSDW-----WVWVHDPENTAAG---LVSGDFPENGP----GYWNLN--QN 64
Query: 185 DFKFMSQNGLNAVRIPVGW 203
D + G+N +R+ V W
Sbjct: 65 DHDLAEKLGVNTIRVGVEW 83
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} Length = 417 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Score = 37.9 bits (88), Expect = 0.003
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH 242
E D ++ QNG A+ + WW + + F + + GMK+I +
Sbjct: 32 ENDLRWAKQNGFYAITVDF-WWGDMEKNGDQQF---DFSYAQRFAQSVKNAGMKMIPIIS 87
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 535 | |||
| d2pb1a1 | 394 | Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) | 100.0 | |
| d1h4pa_ | 408 | Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharom | 100.0 | |
| d1ceoa_ | 340 | Endoglucanase CelC {Clostridium thermocellum [TaxI | 100.0 | |
| d1ecea_ | 358 | Endocellulase E1 {Acidothermus cellulolyticus [Tax | 100.0 | |
| d1vjza_ | 325 | Endoglucanase homologue TM1752 {Thermotoga maritim | 100.0 | |
| d1h1na_ | 305 | Endocellulase EngI {Thermoascus aurantiacus [TaxId | 100.0 | |
| d7a3ha_ | 300 | Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId | 100.0 | |
| d1g01a_ | 357 | Alkaline cellulase K catalytic domain {Bacillus sp | 100.0 | |
| d1wkya2 | 297 | Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 2449 | 100.0 | |
| d1edga_ | 380 | Endoglucanase CelA {Clostridium cellulolyticum [Ta | 100.0 | |
| d1egza_ | 291 | Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: | 99.98 | |
| d1tvna1 | 293 | Endoglucanase Cel5a {Pseudoalteromonas haloplankti | 99.98 | |
| d1bqca_ | 302 | Beta-mannanase {Thermomonospora fusca [TaxId: 2021 | 99.97 | |
| d1qnra_ | 344 | Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | 99.93 | |
| d1rh9a1 | 370 | Beta-mannanase {Tomato (Lycopersicon esculentum) [ | 99.92 | |
| d1uuqa_ | 410 | Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | 99.89 | |
| d2c0ha1 | 350 | endo-1,4-beta-mannosidase {Blue mussel (Mytilus ed | 99.88 | |
| d1dfca3 | 123 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.84 | |
| d1ur4a_ | 387 | Beta-1,4-galactanase {Bacillus licheniformis [TaxI | 99.83 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.74 | |
| d1foba_ | 334 | Beta-1,4-galactanase {Fungus (Aspergillus aculeatu | 99.73 | |
| d1hjsa_ | 332 | Beta-1,4-galactanase {Thielavia heterothallica, ak | 99.71 | |
| d1ug6a_ | 426 | Beta-glucosidase A {Thermus thermophilus [TaxId: 2 | 99.71 | |
| d1e4ia_ | 447 | Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 | 99.69 | |
| d1qoxa_ | 449 | Beta-glucosidase A {Bacillus circulans, subsp. alk | 99.69 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 99.66 | |
| d1qvba_ | 481 | beta-Glycosidase {Archaeon Thermosphaera aggregans | 99.65 | |
| d1uwsa_ | 489 | beta-Glycosidase {Archaeon Sulfolobus solfataricus | 99.63 | |
| d1gnxa_ | 464 | Beta-glucosidase A {Streptomyces sp. [TaxId: 1931] | 99.61 | |
| d2j78a1 | 443 | Beta-glucosidase A {Thermotoga maritima [TaxId: 23 | 99.6 | |
| d1wcga1 | 462 | Thioglucosidase {Cabbage aphid (Brevicoryne brassi | 99.58 | |
| d1bhga3 | 304 | beta-Glucuronidase, domain 3 {Human (Homo sapiens) | 99.57 | |
| d1pbga_ | 468 | 6-phospho-beta-D-galactosidase, PGAL {Lactococcus | 99.53 | |
| d1uhva2 | 346 | Beta-D-xylosidase, catalytic domain {Thermoanaerob | 99.53 | |
| d1v02a_ | 484 | Plant beta-glucosidase (myrosinase) {Sorghum bicol | 99.5 | |
| d1cbga_ | 490 | Plant beta-glucosidase (myrosinase) {Creeping whit | 99.49 | |
| d1e4mm_ | 499 | Plant beta-glucosidase (myrosinase) {White mustard | 99.46 | |
| d1hcda_ | 118 | Histidine-rich actin-binding protein (hisactophili | 99.46 | |
| d1dfca1 | 133 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.42 | |
| d1vffa1 | 423 | Beta-glucosidase A {Archaeon Pyrococcus horikoshii | 99.4 | |
| d1kwga2 | 393 | A4 beta-galactosidase {Thermus thermophilus [TaxId | 99.4 | |
| d1dfca3 | 123 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.39 | |
| d1dfca4 | 111 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 99.32 | |
| d1tg7a5 | 354 | Beta-galactosidase LacA, N-terminal domain {Penici | 99.3 | |
| d1yq2a5 | 297 | beta-Galactosidase, domain 3 {Arthrobacter sp. c2- | 99.13 | |
| d2vzsa5 | 339 | Exochitosanase CsxA {Amycolatopsis orientalis [Tax | 99.04 | |
| d1jz8a5 | 292 | beta-Galactosidase, domain 3 {Escherichia coli [Ta | 98.96 | |
| d1nq6a_ | 302 | Xylanase A, catalytic core {Streptomyces halstedii | 98.95 | |
| d1fh9a_ | 312 | Xylanase A, catalytic core {Cellulomonas fimi [Tax | 98.92 | |
| d1vbua1 | 324 | Xylanase {Thermotoga maritima [TaxId: 2336]} | 98.87 | |
| d1xyza_ | 320 | Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 | 98.73 | |
| d1ta3b_ | 301 | Xylanase A, catalytic core {Emericella nidulans (A | 98.7 | |
| d1us3a2 | 364 | Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] | 98.67 | |
| d1v0la_ | 302 | Xylanase A, catalytic core {Streptomyces lividans | 98.66 | |
| d1n82a_ | 330 | Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId | 98.65 | |
| d1i1wa_ | 303 | Xylanase A, catalytic core {Thermoascus aurantiacu | 98.6 | |
| d2je8a5 | 348 | Five-domain beta-mannosidase, domain 3 {Bacteroide | 98.57 | |
| d1dfca4 | 111 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 98.52 | |
| d1r85a_ | 371 | Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: | 98.3 | |
| d1ur1a_ | 350 | Xylanase {Cellvibrio mixtus [TaxId: 39650]} | 98.23 | |
| d1vema2 | 417 | Bacterial beta-amylase {Bacillus cereus [TaxId: 13 | 98.16 | |
| d1qw9a2 | 367 | Alpha-L-arabinofuranosidase, catalytic domain {Bac | 98.16 | |
| d1nofa2 | 277 | Glycosyl hydrolase family 5 xylanase, catalytic do | 98.08 | |
| d1w32a_ | 346 | Xylanase A, catalytic core {Pseudomonas fluorescen | 97.96 | |
| d2nt0a2 | 354 | Glucosylceramidase, catalytic domain {Human (Homo | 97.28 | |
| d1ghsa_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 97.14 | |
| d2cyga1 | 312 | Plant beta-glucanases {Banana (Musa acuminata), 1, | 97.06 | |
| d1aq0a_ | 306 | Plant beta-glucanases {Barley (Hordeum vulgare), 1 | 96.82 | |
| d1dfca2 | 119 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 96.74 | |
| d2v3ga1 | 273 | Endoglucanase H N-terminal domain {Clostridium the | 95.51 | |
| d1ud2a2 | 390 | Bacterial alpha-amylase {Bacillus sp., ksm-k38 [Ta | 95.49 | |
| d1j0ha3 | 382 | Neopullulanase, central domain {Bacillus stearothe | 95.41 | |
| d1ea9c3 | 382 | Maltogenic amylase, central domain {Bacillus sp., | 95.4 | |
| d1g94a2 | 354 | Bacterial alpha-amylase {Pseudoalteromonas halopla | 95.35 | |
| d1wdpa1 | 490 | beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | 95.29 | |
| d1eh9a3 | 400 | Glycosyltrehalose trehalohydrolase, central domain | 95.19 | |
| d2bhua3 | 420 | Glycosyltrehalose trehalohydrolase, central domain | 95.12 | |
| d1h3ga3 | 422 | Cyclomaltodextrinase, central domain {Flavobacteri | 95.11 | |
| d1fa2a_ | 498 | beta-Amylase {Sweet potato (Ipomoea batatas) [TaxI | 95.08 | |
| d1m7xa3 | 396 | 1,4-alpha-glucan branching enzyme, central domain | 95.06 | |
| d1b1ya_ | 500 | beta-Amylase {Barley (Hordeum vulgare) [TaxId: 451 | 95.03 | |
| d1ht6a2 | 347 | Plant alpha-amylase {Barley (Hordeum vulgare), AMY | 94.93 | |
| d1gcya2 | 357 | G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase | 94.77 | |
| d1bf2a3 | 475 | Isoamylase, central domain {Pseudomonas amyloderam | 94.7 | |
| d1hvxa2 | 393 | Bacterial alpha-amylase {Bacillus stearothermophil | 94.51 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 94.24 | |
| d1mxga2 | 361 | Bacterial alpha-amylase {Archaeon Pyrococcus woese | 94.01 | |
| d1hx0a2 | 403 | Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 982 | 93.89 | |
| d3bmva4 | 406 | Cyclodextrin glycosyltransferase {Thermoanaerobact | 93.76 | |
| d1lwha2 | 391 | 4-alpha-glucanotransferase {Thermotoga maritima [T | 93.7 | |
| d2aaaa2 | 381 | Fungal alpha-amylases {Aspergillus niger, acid amy | 93.54 | |
| d1e43a2 | 393 | Bacterial alpha-amylase {Chimera (Bacillus amyloli | 93.54 | |
| d2d3na2 | 394 | Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: | 93.5 | |
| d1uoka2 | 479 | Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 13 | 93.48 | |
| d2guya2 | 381 | Fungal alpha-amylases {Aspergillus oryzae, Taka-am | 93.47 | |
| d1qhoa4 | 407 | Cyclodextrin glycosyltransferase {Bacillus stearot | 93.39 | |
| d1wzla3 | 382 | Maltogenic amylase, central domain {Thermoactinomy | 93.34 | |
| d1m53a2 | 478 | Isomaltulose synthase PalI {Klebsiella sp., lx3 [T | 93.28 | |
| d1jaea2 | 378 | Animal alpha-amylase {Yellow mealworm (Tenebrio mo | 92.81 | |
| d1ua7a2 | 344 | Bacterial alpha-amylase {Bacillus subtilis [TaxId: | 92.05 | |
| d1gjwa2 | 572 | Maltosyltransferase {Thermotoga maritima [TaxId: 2 | 91.89 | |
| d1g5aa2 | 554 | Amylosucrase {Neisseria polysaccharea [TaxId: 489] | 90.84 | |
| d2bvya2 | 366 | Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708] | 90.57 | |
| d1wzaa2 | 409 | Bacterial alpha-amylase {Halothermothrix orenii [T | 88.79 | |
| d2ihoa1 | 154 | Agglutinin MOA, N-terminal domain {Fairy-ring mush | 88.62 | |
| d1upsa2 | 131 | GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosi | 88.39 | |
| d2fhfa5 | 563 | Pullulanase PulA {Klebsiella pneumoniae [TaxId: 57 | 87.91 | |
| d1yhta1 | 344 | Dispersin B, DspB {Actinobacillus actinomycetemcom | 87.76 | |
| d1hl9a2 | 350 | Putative alpha-L-fucosidase, catalytic domain {The | 86.79 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 86.74 | |
| d1jaka1 | 356 | beta-N-acetylhexosaminidase {Streptomyces plicatus | 85.25 | |
| d1qxma1 | 145 | Hemagglutinin component Ha1 {Clostridium botulinum | 85.15 | |
| d1iv8a2 | 653 | Maltooligosyl trehalose synthase {Archaeon Sulfolo | 84.46 | |
| d1x7fa2 | 244 | Outer surface protein, N-terminal domain {Bacillus | 83.86 | |
| d1qxma2 | 138 | Hemagglutinin component Ha1 {Clostridium botulinum | 83.33 | |
| d1dfca2 | 119 | Fascin {Human (Homo sapiens) [TaxId: 9606]} | 83.04 | |
| d2fdbm1 | 147 | Fibroblast growth factor 8, FGF8 {Human (Homo sapi | 80.29 |
| >d2pb1a1 c.1.8.3 (A:7-400) Exo-beta-(1,3)-glucanase {Yeast (Candida albicans) [TaxId: 5476]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00 E-value=4.6e-46 Score=389.56 Aligned_cols=310 Identities=32% Similarity=0.593 Sum_probs=247.1
Q ss_pred CCcccceecccc-----cccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCC
Q 046395 141 NDPSVFNMTIVS-----TMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPF 215 (535)
Q Consensus 141 ~~ps~f~~~~~~-----~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~ 215 (535)
+.|++|...... ...+|+++++.+|.+.+..+++.||++|||++||+.||++|+|+|||||+||.+..+ ++.+|
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~h~~~~it~~D~~~i~~~G~N~VRiPv~~~~~~~~-~~~~~ 102 (394)
T d2pb1a1 24 MTPSLFEPFQNGNDQSGVPVDEYHWTQTLGKEAALRILQKHWSTWITEQDFKQISNLGLNFVRIPIGYWAFQLL-DNDPY 102 (394)
T ss_dssp TCGGGTGGGCBTTBCTTSCCSHHHHHHHHCHHHHHHHHHHHHHHSSCHHHHHHHHHTTCCEEEEEEEGGGTCCC-TTCCC
T ss_pred cCchhhhhccCCCccccccchHHHHHHHhChHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEEecHHHhcCC-CCCcc
Confidence 677777643321 245799999999999999999999999999999999999999999999999876444 55668
Q ss_pred ccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCC---cEEEE
Q 046395 216 VGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRYADHP---SLVAI 291 (535)
Q Consensus 216 ~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p---~V~~~ 291 (535)
.++.+++||++|++|+++||+||||||.+||++++++++|.... ..|. +.+.+++.++|+.||+||+++| .|++|
T Consensus 103 ~~~~~~~ld~~i~~a~~~gl~VilDlH~~pg~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~ia~~~~~~~~~~~v~g~ 181 (394)
T d2pb1a1 103 VQGQVQYLEKALGWARKNNIRVWIDLHGAPGSQNGFDNSGLRDS-YNFQNGDNTQVTLNVLNTIFKKYGGNEYSDVVIGI 181 (394)
T ss_dssp CCCHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTC-CCTTSTTHHHHHHHHHHHHHHHHSSGGGTTTEEEE
T ss_pred chhHHHHHHHHHHHHHHCCcEEEEEeeccCCcccCcCCcCccCc-cccccHHHHHHHHHHHHHHHHHHccCCCCCceEEE
Confidence 88899999999999999999999999999999999998876543 3444 8899999999999999999976 69999
Q ss_pred EeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCC--CChhhhhcccCCCCcEEEEEeecCcCCCcccCCCh
Q 046395 292 ELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLG--GEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSV 369 (535)
Q Consensus 292 el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g--~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~ 369 (535)
||+|||.......+.+++||++++++||+++|+++|++++.+. ..+..++..+....++||++|+|.+|.......+.
T Consensus 182 el~NEP~~~~~~~~~~~~~~~~~~~~IR~~~~~~~I~i~~~~~~~~~~~~~~~~~~~~~~vv~d~H~Y~~f~~~~~~~~~ 261 (394)
T d2pb1a1 182 ELLNEPLGPVLNMDKLKQFFLDGYNSLRQTGSVTPVIIHDAFQVFGYWNNFLTVAEGQWNVVVDHHHYQVFSGGELSRNI 261 (394)
T ss_dssp ESCSCCCGGGSCHHHHHHHHHHHHHHHHHTTCCCCEEEECTTCCTTTTTTSSCGGGTCCSEEEEEECCSCSSHHHHTCCH
T ss_pred eecccCCcccccHHHHHHHHHHHHHHHHHhCCCCeEEEcCCCcchhhhhhhccCCCCCceEEEeeecccccCCccccCCH
Confidence 9999998755667899999999999999999999999987654 33455555555678999999999998776667777
Q ss_pred hhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC------------------------------------CCCHHH
Q 046395 370 QQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE------------------------------------GASKRD 413 (535)
Q Consensus 370 ~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~------------------------------------~~~~~~ 413 (535)
.+++...+.... ... ....|+++|||+.....+ ....+.
T Consensus 262 ~~~i~~~~~~~~----~~~-~~~~~~~~ge~s~~~~d~~~~~~~~~~~~~~~g~~~~~~~~Ge~~~~~d~~~~~~~~~~~ 336 (394)
T d2pb1a1 262 NDHISVACNWGW----DAK-KESHWNVAGEWSAALTDCAKWLNGVNRGARYEGAYDNAPYIGSCQPLLDISQWSDEHKTD 336 (394)
T ss_dssp HHHHHHHHHHHH----HHH-TCSSEEEEEECCSCSSCCSTTTTCTTCCCTTBTCSTTCCBCCCSGGGSSGGGCCHHHHHH
T ss_pred HHHHHhhhhhhh----hhh-cccCcceeceecccchhhhhhhcccccccccccccCCCccccccccccChhhcCHHHHHH
Confidence 777777665322 122 234468899987543110 001346
Q ss_pred HHHHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCCccccccccccccccCcCCC
Q 046395 414 YQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHIFSSLNE 472 (535)
Q Consensus 414 ~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~~~W~~~~~~~~~~l~~ 472 (535)
+++|+++|+++|+ .+.||+||+||.+.++ .|+.+..+-...+..
T Consensus 337 ~r~~~~aQ~~~~e-~~~GW~fWt~K~~~~~--------------~W~~~~~~~~G~iP~ 380 (394)
T d2pb1a1 337 TRRYIEAQLDAFE-YTGGWVFWSWKTENAP--------------EWSFQTLTYNGLFPQ 380 (394)
T ss_dssp HHHHHHHHHHHHH-TTTEEEESCSCCSSCG--------------GGCHHHHHHTTCSCS
T ss_pred HHHHHHHHHHHHh-cCCcEEEeccccCCCC--------------CCCHHHHHHCCCcCC
Confidence 7899999999997 5679999999987442 577766555544543
|
| >d1h4pa_ c.1.8.3 (A:) Exo-beta-(1,3)-glucanase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exo-beta-(1,3)-glucanase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=3.6e-45 Score=383.92 Aligned_cols=314 Identities=27% Similarity=0.507 Sum_probs=244.8
Q ss_pred CCcccceecccc------cccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCC
Q 046395 141 NDPSVFNMTIVS------TMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKP 214 (535)
Q Consensus 141 ~~ps~f~~~~~~------~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~ 214 (535)
+.|++|...... ...+|+++++.+|.+.+...++.||++||||+||+.||++|||+|||||+||.+. +.++.+
T Consensus 28 i~p~~f~~~~~~~~~~~~~~~de~~~~~~~G~~~~~~~~~~h~~~~ite~D~~~i~~~G~N~VRiPi~~~~~~-~~~~~~ 106 (408)
T d1h4pa_ 28 ITPSLFEAFRTNDDNDEGIPVDEYHFCQYLGKDLAKSRLQSHWSTFYQEQDFANIASQGFNLVRIPIGYWAFQ-ILDDDP 106 (408)
T ss_dssp TSHHHHHTTCCCTTCCTTCCSSHHHHHHHHCHHHHHHHHHHHHHHHSCHHHHHHHHHTTCCEEEEEEEGGGTC-CCTTCC
T ss_pred cCchhhhhccccccccccccchHHHHHHHhCHHHHHHHHHHHHhccCCHHHHHHHHHCCCCEEEEeccHHHhc-CCCCCC
Confidence 677778654432 2347899999999999999999999999999999999999999999999998764 333344
Q ss_pred C-ccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCC---CcEEE
Q 046395 215 F-VGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADH---PSLVA 290 (535)
Q Consensus 215 ~-~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~---p~V~~ 290 (535)
+ .+..+++||++|++|+++||+||||||++||+++++++++.......+.+++++++.++|++||+||+++ +.|++
T Consensus 107 ~~~~~~~~~ld~~v~~a~~~gl~VilDlH~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~r~~~~~~~~~v~g 186 (408)
T d1h4pa_ 107 YVSGLQESYLDQAIGWARNNSLKVWVDLHGAAGSQNGFDNSGLRDSYKFLEDSNLAVTINVLNYILKKYSAEEYLDIVIG 186 (408)
T ss_dssp CCCSSHHHHHHHHHHHHHHTTCEEEEEEEECTTCSSCCGGGSSTTCCCTTSHHHHHHHHHHHHHHHHHTTSHHHHTTEEE
T ss_pred CcChhHHHHHHHHHHHHHHCCCEEEEEeCCCCCCCcCCCCCCcccccccCCchHHHHHHHHHHHHHHHhcccccccceee
Confidence 4 4458999999999999999999999999999999999988665444455889999999999999999997 67999
Q ss_pred EEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCC-CcEEEEcCCCC--CChhhhhcccCCCCcEEEEEeecCcCCCcccC
Q 046395 291 IELMNEPKAPDLK-LDSLKTYYKAGYDTVRKYSS-SAYVILSNRLG--GEWSELLSFASNLSRVVIDVHFYNLFWDNFNK 366 (535)
Q Consensus 291 ~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p-~~~ii~~~~~g--~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~ 366 (535)
|||+|||..+... ...+..|+++++++||+..+ +.+|++++.|. ..+..++.......++++|.|+|.+|......
T Consensus 187 ~el~NEP~~~~~~~~~~~~~~~~~~~~~iR~~~~~~~~iv~~d~~~~~~~w~~~~~~~~~~~~vv~D~H~Y~~f~~~~~~ 266 (408)
T d1h4pa_ 187 IELINEPLGPVLDMDKMKNDYLAPAYEYLRNNIKSDQVIIIHDAFQPYNYWDDFMTENDGYWGVTIDHHHYQVFASDQLE 266 (408)
T ss_dssp EESCSCCCGGGSCHHHHHHHTHHHHHHHHHHTTCCCCCEEEECTTCCTTGGGGSSCGGGTCCSEEEEEEECSCSSHHHHT
T ss_pred eecccCccccccchHHHHHHHHHHHHHHHHhccccCceEEEecCCCChhhhhhhcccCCCCceeEeeccceeeecCCccc
Confidence 9999999864333 35688899999999998755 55677777664 33556666555678899999999998766666
Q ss_pred CChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC---------------------------------------
Q 046395 367 MSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE--------------------------------------- 407 (535)
Q Consensus 367 ~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~--------------------------------------- 407 (535)
.+.++++..++..... ..+ ...|+++|||+.....+
T Consensus 267 ~s~~~~i~~~~~~~~~----~~~-~~~p~~vGEws~a~td~~~~~n~~g~~~~~~ge~~~~~~~~~~~g~c~~~~~~~~~ 341 (408)
T d1h4pa_ 267 RSIDEHIKVACEWGTG----VLN-ESHWIVCGEFAAALTDCIKWLNSVGFGARYDGSWVNGDQTSSYIGSCANNDDIAYW 341 (408)
T ss_dssp CCHHHHHHHHHHHHHH----HTT-CSSEEEEEEECSCSSSCSTTTTCTTCCCTTBTCCCBTTBCCCBCSCCTTTTCGGGC
T ss_pred CChhhhhhhhhhhhhh----hhc-ccCCcccccccccccchhhhcccccccceeecccccCCcCccccccccccCChhhC
Confidence 7788888877764322 222 34569999998642110
Q ss_pred -CCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCCccccccccccccccCcCCCCCC
Q 046395 408 -GASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHIFSSLNEPND 475 (535)
Q Consensus 408 -~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~~~W~~~~~~~~~~l~~~n~ 475 (535)
...++.+++|+++|+++|++ +.||+||+||.++++ .|+.+..+-+..|.+|.+
T Consensus 342 ~~~~~~~~r~~~eaQ~~~ye~-~~GW~fWt~K~e~~~--------------~W~~~~~~~~g~iP~~~~ 395 (408)
T d1h4pa_ 342 SDERKENTRRYVEAQLDAFEM-RGGWIIWCYKTESSL--------------EWDAQRLMFNGLFPQPLT 395 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHHTT-TTEEEESCSCCSSCS--------------TTCHHHHHHTTSSCSSTT
T ss_pred CHHHHHHHHHHHHHHHHHHhc-CCCEEEeeeeCCCCC--------------CCCHHHHHHCCCcCCCcc
Confidence 00124568899999999974 689999999997543 587777666666655433
|
| >d1ceoa_ c.1.8.3 (A:) Endoglucanase CelC {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelC species: Clostridium thermocellum [TaxId: 1515]
Probab=100.00 E-value=7.3e-38 Score=320.48 Aligned_cols=254 Identities=20% Similarity=0.368 Sum_probs=190.4
Q ss_pred hHHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCC
Q 046395 172 LMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGS 251 (535)
Q Consensus 172 ~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~ 251 (535)
..++||++++||+||+.||++|+|+|||||+|+.+....+...++++.++.||++|++|.++||+||||+|+.|+.+.+.
T Consensus 20 ~~~~h~~~~~te~d~~~i~~~G~n~vRlpi~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild~H~~p~~~~~~ 99 (340)
T d1ceoa_ 20 FSKEHFDTFITEKDIETIAEAGFDHVRLPFDYPIIESDDNVGEYKEDGLSYIDRCLEWCKKYNLGLVLDMHHAPGYRFQD 99 (340)
T ss_dssp CCHHHHHHHSCHHHHHHHHHHTCCEEEEEEEGGGTBCSSSTTCBCHHHHHHHHHHHHHHHHTTCEEEEEEEECCC-----
T ss_pred cchhhhcccccHHHHHHHHHcCCCEEEeecCHHHhccCCCCCccCHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccc
Confidence 45589999999999999999999999999999876544334458888999999999999999999999999999876543
Q ss_pred CCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 252 PHSGSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 252 ~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
.+. ...|. +...+.+.++|+.||+||+++|+|++|||+|||..+ ....|.+++++++++||+++|+++|+++
T Consensus 100 ~~~-----~~~~~~~~~~~~~~~~~~~la~ry~~~p~v~~~el~NEP~~~--~~~~~~~~~~~~~~aIR~~dp~~~I~v~ 172 (340)
T d1ceoa_ 100 FKT-----STLFEDPNQQKRFVDIWRFLAKRYINEREHIAFELLNQVVEP--DSTRWNKLMLECIKAIREIDSTMWLYIG 172 (340)
T ss_dssp --------CCTTTCHHHHHHHHHHHHHHHHHTTTCCSSEEEECCSCCCCS--SSHHHHHHHHHHHHHHHHHCSSCCEEEE
T ss_pred ccc-----ccccccHHHHHHHHHHHHHHHHhcCCCCcEEEEeeeeecCCC--CHHHHHHHHHHHHHHHHhcCCCcEEEeC
Confidence 322 22333 678999999999999999999999999999999853 5678999999999999999999999997
Q ss_pred CC-CCCChhhhhcc-cCCCCcEEEEEeecCcCCCcccCCCh---------------------------------------
Q 046395 331 NR-LGGEWSELLSF-ASNLSRVVIDVHFYNLFWDNFNKMSV--------------------------------------- 369 (535)
Q Consensus 331 ~~-~g~~~~~~~~~-~~~~~n~v~d~H~Y~~~~~~~~~~~~--------------------------------------- 369 (535)
+. |+ ....+..+ +..+++++|++|+|.|+. |+++..
T Consensus 173 g~~~~-~~~~~~~~~~~~d~nv~~~~H~Y~p~~--fth~~~~w~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 249 (340)
T d1ceoa_ 173 GNNYN-SPDELKNLADIDDDYIVYNFHFYNPFF--FTHQKAHWSESAMAYNRTVKYPGQYEGIEEFVKNNPKYSFMMELN 249 (340)
T ss_dssp CHHHH-CGGGGGGSCCCCCSSEEEEEEECCSHH--HHTTTCTTCHHHHHHCCCCCSSEECCSHHHHHHHCGGGGGGGGGT
T ss_pred CCCcC-CchhhhcCCCCCCCCEEEEEeccCccc--cccccccccccccccccccCCCccccccccccccccccccccccc
Confidence 52 32 22222222 245789999999998752 211110
Q ss_pred --hhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeee
Q 046395 370 --QQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKF 439 (535)
Q Consensus 370 --~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~ 439 (535)
......+...... +..+.+.++.|++|||||+... ...+...+|++++++++++.++||+||+|+.
T Consensus 250 ~~~~~~~~~~~~~~~-~~~~~~~~g~Pv~igEFG~~~~---~~~~~~~~~~~~~~~~~~~~~igw~~W~~~~ 317 (340)
T d1ceoa_ 250 NLKLNKELLRKDLKP-AIEFREKKKCKLYCGEFGVIAI---ADLESRIKWHEDYISLLEEYDIGGAVWNYKK 317 (340)
T ss_dssp TCEESHHHHHHHHHH-HHHHHHHHCCEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBS
T ss_pred cccccHHHHHHHHHH-HHHHHHHcCCCEEEEccCCcCC---CCHHHHHHHHHHHHHHHHHcCCcEEEeCCCC
Confidence 0112333333322 2333444555699999997532 3455667899999999999999999999976
|
| >d1ecea_ c.1.8.3 (A:) Endocellulase E1 {Acidothermus cellulolyticus [TaxId: 28049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase E1 species: Acidothermus cellulolyticus [TaxId: 28049]
Probab=100.00 E-value=5.4e-36 Score=306.88 Aligned_cols=303 Identities=16% Similarity=0.228 Sum_probs=203.0
Q ss_pred CceEEEecccEEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCE
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNA 196 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~ 196 (535)
++||++.|+.|++++++. -.+.+ .|.+|.+.+....+.+|... .+++|+.||++|+|+
T Consensus 3 ~g~l~~~G~~~~d~~G~~---------~~l~G------------vN~~g~~~~~~~~~~~~~~~-~~~~~~~i~~~G~N~ 60 (358)
T d1ecea_ 3 GGYWHTSGREILDANNVP---------VRIAG------------INWFGFETCNYVVHGLWSRD-YRSMLDQIKSLGYNT 60 (358)
T ss_dssp CSCCEEETTEEECTTSCE---------ECCEE------------EECCCBTTTTCSCTTTTTSC-HHHHHHHHHHTTCCE
T ss_pred CCeEEeeCCEEECCCCCE---------EEEEE------------EccCcccccccccccCCccH-HHHHHHHHHHcCCCE
Confidence 689999999999977643 23332 23455555655666667554 489999999999999
Q ss_pred EEeCCccccccCCCCC----------CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-h
Q 046395 197 VRIPVGWWIAYDPKPP----------KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-D 265 (535)
Q Consensus 197 VRipv~~w~~~~p~~~----------~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~ 265 (535)
|||||+||.+....+. ..+....++.||++|++|+++||+||||+|..+++..+.. .+. +
T Consensus 61 VRlpv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~Gl~Vildlh~~~~~~~~~~---------~~~~~ 131 (358)
T d1ecea_ 61 IRLPYSDDILKPGTMPNSINFYQMNQDLQGLTSLQVMDKIVAYAGQIGLRIILDRHRPDCSGQSAL---------WYTSS 131 (358)
T ss_dssp EEEEEEGGGGSTTCCCCSCCCSSSCTTTTTCCHHHHHHHHHHHHHHTTCEEEEEEEESBTTBCCSS---------SCCSS
T ss_pred EEecCcHHHccCCCCCCCccccccChhhhchhHHHHHHHHHHHHHHCCCceeeecccccccCCCcc---------ccCCh
Confidence 9999999876542211 1123458999999999999999999999998755433211 111 3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC-----CChHHHHHHHHHHHHHHHhcCCCcEEEEcCC--------
Q 046395 266 SDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD-----LKLDSLKTYYKAGYDTVRKYSSSAYVILSNR-------- 332 (535)
Q Consensus 266 ~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~-----~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-------- 332 (535)
...+++.++|+.|++||+++|+|++|||+|||..+. .....+..++++++++||+.+|+++|++++.
T Consensus 132 ~~~~~~~~~~~~ia~~~~~~~~v~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~Ir~~d~~~~v~v~g~~~~~~~~~ 211 (358)
T d1ecea_ 132 VSEATWISDLQALAQRYKGNPTVVGFDLHNEPHDPACWGCGDPSIDWRLAAERAGNAVLSVNPNLLIFVEGVQSYNGDSY 211 (358)
T ss_dssp SCHHHHHHHHHHHHHHTTTCTTEEEEECSSCCCTTCBSSCCCTTTBHHHHHHHHHHHHHHHCTTSEEEEECBSEETTEEC
T ss_pred HHHHHHHHHHHHHHHhhcCccceEeeeeccccccCCcCCccchhhhHHHHHHHHHHHHHhhCCCcEEEEeccccCccccc
Confidence 577899999999999999999999999999998642 2346689999999999999999999998641
Q ss_pred -CCCChhhhhc---ccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCC
Q 046395 333 -LGGEWSELLS---FASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEG 408 (535)
Q Consensus 333 -~g~~~~~~~~---~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~ 408 (535)
++.+...... .....+++||++|.|.++...............+.......+..+...++.|++|||||+.....
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~v~~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv~igEfG~~~~~~- 290 (358)
T d1ecea_ 212 WWGGNLQGAGQYPVVLNVPNRLVYSAHDYATSVYPQTWFSDPTFPNNMPGIWNKNWGYLFNQNIAPVWLGEFGTTLQST- 290 (358)
T ss_dssp STTTBCTTTTTSCCCCSSSSCEEEEEECCCTTTCCCGGGSCTTTTTTHHHHHHHHTHHHHHTTSSCEEEEECCCCCCSH-
T ss_pred cccccccchhhCCccCCccCceEEEeeecCCCcCCccccccchhhhhHHHHHHHHHHHHHHhcCCeEEEecCCCCCCCC-
Confidence 1111111111 11345789999999987542211111111111222222223333444555669999999865421
Q ss_pred CCHHHHH----HHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCC
Q 046395 409 ASKRDYQ----RFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSST 453 (535)
Q Consensus 409 ~~~~~~~----~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~ 453 (535)
....+. +|+..+ ..+.+.++||+||+||.+.+..++++..+|.
T Consensus 291 -~~~~~~~~~~~~~~~~-~~~~~~~~gw~~W~~k~~~~~~~G~~~~dw~ 337 (358)
T d1ecea_ 291 -TDQTWLKTLVQYLRPT-AQYGADSFQWTFWSWNPDSGDTGGILKDDWQ 337 (358)
T ss_dssp -HHHHHHHHHHHHTCCH-HHHTTSSCEEEESCSCSCCTTTCCSBCTTSS
T ss_pred -ChHHHHHHHHHHHHHH-HHhcccCceEEEEcCCCCCCCCcceecCCCC
Confidence 222333 333332 3345678999999999987665555555554
|
| >d1vjza_ c.1.8.3 (A:) Endoglucanase homologue TM1752 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase homologue TM1752 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=6.3e-34 Score=287.73 Aligned_cols=259 Identities=19% Similarity=0.297 Sum_probs=192.4
Q ss_pred HHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCC
Q 046395 173 MRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSP 252 (535)
Q Consensus 173 ~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~ 252 (535)
+..|+.++++|+||+.||++|+|+|||||.|+.+....++..++++.|++||++|++|.++||+||||+|+.||.+.+..
T Consensus 13 ~~~~~~~~~~e~d~~~l~~~G~n~vRlpv~~~~~~~~~~~~~~~~~~l~~ld~~v~~~~~~gi~vildlH~~pg~~~~~~ 92 (325)
T d1vjza_ 13 FSIKSTGNFKEEDFLWMAQWDFNFVRIPMCHLLWSDRGNPFIIREDFFEKIDRVIFWGEKYGIHICISLHRAPGYSVNKE 92 (325)
T ss_dssp SSTTCCCCCCHHHHHHHHHTTCCEEEEEEEGGGTSCSSCTTCCCGGGHHHHHHHHHHHHHHTCEEEEEEEEETTEESCTT
T ss_pred hhhcccCCCCHHHHHHHHHcCCCEEEecccHHHccCCCCCCccCHHHHHHHHHHHHHHHHcCCcEEEeeccccccccCcc
Confidence 44678889999999999999999999999998765544444467889999999999999999999999999999887765
Q ss_pred CCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC---CCChHHHHHHHHHHHHHHHhcCCCcEE
Q 046395 253 HSGSRDGFQEWS-DSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP---DLKLDSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 253 ~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
++. ....|. ..+.++++.+|+.|+++|++++ .|++|||+|||... ....+.+..++++++++||+++|+++|
T Consensus 93 ~~~---~~~~~~~~~~~~~~~~~w~~~a~~~~~~~~~i~~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~ir~~~p~~~v 169 (325)
T d1vjza_ 93 VEE---KTNLWKDETAQEAFIHHWSFIARRYKGISSTHLSFNLINEPPFPDPQIMSVEDHNSLIKRTITEIRKIDPERLI 169 (325)
T ss_dssp SCC---SSCTTTCHHHHHHHHHHHHHHHHHHTTSCTTTEEEECSSCCCCCBTTTBCHHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred ccc---ccccccchhhHHHHHHHHHHHHHHhcccceeEEeeeccccCCCCccccchhhhhhhHHHHHHHHHhccCCCcEE
Confidence 543 333454 6788899999999999999875 57999999999864 245678999999999999999999999
Q ss_pred EEcCCCCCChhhhhcccCCCCcEEEEEeecCcCCCc-----------ccCC--------ChhhhHHHHHHhhhHHHHHHh
Q 046395 328 ILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDN-----------FNKM--------SVQQNIDYIYRQRSSDLRNVT 388 (535)
Q Consensus 328 i~~~~~g~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~-----------~~~~--------~~~~~i~~i~~~~~~~l~~~~ 388 (535)
++++. .+...........++++++|.|.++... +... ............... +....
T Consensus 170 ~v~g~---~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 245 (325)
T d1vjza_ 170 IIDGL---GYGNIPVDDLTIENTVQSCRGYIPFSVTHYKAEWVDSKDFPVPEWPNGWHFGEYWNREKLLEHYLT-WIKLR 245 (325)
T ss_dssp EEECH---HHHTBCCTTCCCSSEEEEEEECCSHHHHSTTCTTTTCTTCCCCCSSSEEETTEEECHHHHHHHHHH-HHGGG
T ss_pred EecCC---ccccccCCcccccceeeeecccccccccccccccccccccccCCCCccccccccccHHHHHHHHHH-HHHHH
Confidence 98752 1222222234567899999999764210 0000 000111222221111 12222
Q ss_pred hcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCC
Q 046395 389 TSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAES 442 (535)
Q Consensus 389 ~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~ 442 (535)
+. +.|++|||||.... +..+...+|++++++++++.++||+||+|+...+
T Consensus 246 ~~-g~Pv~~gEfG~~~~---~~~~~~~~~~~~~l~~~~~~g~g~~~W~~~~~~g 295 (325)
T d1vjza_ 246 QK-GIEVFCGEMGAYNK---TPHDVVLKWLEDLLEIFKTLNIGFALWNFRGPFG 295 (325)
T ss_dssp GG-TCEEEEEEECCCTT---SCHHHHHHHHHHHHHHHHHTTCEEEESCSBSTTS
T ss_pred hc-CCCEEEeeccCcCC---CCcHHHHHHHHHHHHHHHHcCCeEEEEcCCCCcc
Confidence 23 45699999996432 4566778899999999999999999999987544
|
| >d1h1na_ c.1.8.3 (A:) Endocellulase EngI {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endocellulase EngI species: Thermoascus aurantiacus [TaxId: 5087]
Probab=100.00 E-value=1.9e-34 Score=290.83 Aligned_cols=245 Identities=16% Similarity=0.172 Sum_probs=174.7
Q ss_pred HHhhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCC
Q 046395 173 MRDHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSP 252 (535)
Q Consensus 173 ~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~ 252 (535)
+..|+ .|++++||+.||++|+|+|||||.|+.+....++..+++..++.|+++|++|.++||+||||+|+.......
T Consensus 25 ~~~~~-~~~t~~di~~l~~~G~N~VRlPv~~~~~~~~~~~~~~~~~~~~~l~~~v~~a~~~gl~vIlD~H~~~~~~~~-- 101 (305)
T d1h1na_ 25 EGKDY-IWPDPNTIDTLISKGMNIFRVPFMMERLVPNSMTGSPDPNYLADLIATVNAITQKGAYAVVDPHNYGRYYNS-- 101 (305)
T ss_dssp BTTTB-CCCCHHHHHHHHHTTCCEEEEEECHHHHSCSSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECCTTEETTE--
T ss_pred cCCCc-ccCCHHHHHHHHHCCCCEEEeeeeHHHhccCCCCCccCHHHHHHHHHHHHHHHhcCCeEEEecccCCccccc--
Confidence 33455 478999999999999999999999976544333445788899999999999999999999999986432110
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCC-CcEEEEcC
Q 046395 253 HSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSS-SAYVILSN 331 (535)
Q Consensus 253 ~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p-~~~ii~~~ 331 (535)
. ....+++.++|++||++|+++|.| +|||+|||+ +.....|+.++++++++||++++ +++|++++
T Consensus 102 --------~---~~~~~~~~~~W~~ia~~~~~~~~v-~~el~NEP~--~~~~~~w~~~~~~~~~~IR~~~~~~~~i~v~~ 167 (305)
T d1h1na_ 102 --------I---ISSPSDFETFWKTVASQFASNPLV-IFDTDNEYH--DMDQTLVLNLNQAAIDGIRSAGATSQYIFVEG 167 (305)
T ss_dssp --------E---CCCHHHHHHHHHHHHHTSTTCTTE-EEECCSCCC--SSCHHHHHHHHHHHHHHHHHTTCCSSCEEEEC
T ss_pred --------c---cccHHHHHHHHHHHHHHhCCCCee-EEEeccCCC--CccHHHHHHHHHHHHHHHHhcCCCCCEEEECC
Confidence 0 134578999999999999999988 599999998 45678999999999999999984 67777754
Q ss_pred -CCC--CChhh----hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCc
Q 046395 332 -RLG--GEWSE----LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEW 404 (535)
Q Consensus 332 -~~g--~~~~~----~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~ 404 (535)
.|+ ..+.. +..+....+++||++|.|.+++. .+...+.........+...+..+.+.++.|++|||||...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~s~H~Y~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~g~p~~igEfG~~~ 245 (305)
T d1h1na_ 168 NSWTGAWTWTNVNDNMKSLTDPSDKIIYEMHQYLDSDG--SGTSATCVSSTIGQERITSATQWLRANGKKGIIGEFAGGA 245 (305)
T ss_dssp TGGGBSTTHHHHSGGGGGCCCTTCCEEEEEEEECSTTS--SSCCSCCSCTTHHHHHHHHHHHHHHHTTCCEEEEEEECCS
T ss_pred CcccccccccccCcccccCCCCCCCEEEEEEeCCCCCC--CCccccccccchHHHHHHHHHHHHHHcCCcEEEEcCCCCC
Confidence 343 12221 22333456799999999987542 2111111111111112222334445566679999998642
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhhCC---cceEEEeeeeCCC
Q 046395 405 EAEGASKRDYQRFAEAQLDVYGRAT---FGWAYWAYKFAES 442 (535)
Q Consensus 405 ~~~~~~~~~~~~~~~~ql~~~~~~~---~Gw~~W~~k~~~~ 442 (535)
......+++.+++.++++. +||+||+..+.++
T Consensus 246 ------~~~~~~~~~~~~~~~~~~~~~~~gw~~W~~g~~w~ 280 (305)
T d1h1na_ 246 ------DNVCETAITGMLDYMAQNTDVWTGAIWWAAGPWWG 280 (305)
T ss_dssp ------SHHHHHHHHHHHHHHHTCTTTEEEEEEEEECTTCT
T ss_pred ------CCcHHHHHHHHHHHHHHcCCcceEEEEecCCCCCC
Confidence 2345678888899998877 6788888766443
|
| >d7a3ha_ c.1.8.3 (A:) Endoglucanase Cel5a {Bacillus agaradhaerens [TaxId: 76935]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Bacillus agaradhaerens [TaxId: 76935]
Probab=100.00 E-value=5.8e-33 Score=278.91 Aligned_cols=255 Identities=18% Similarity=0.265 Sum_probs=180.8
Q ss_pred ceEEEecccEEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHH-HcCCCE
Q 046395 118 YFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMS-QNGLNA 196 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik-~~G~N~ 196 (535)
++|+++|++||+++++ |-++.+. +..|. ..+..+++++||+.|+ ++|+|+
T Consensus 7 g~l~v~g~~ivd~nG~---------~v~lrGv------------n~~~~--------~~~~~~~~~~~~~~l~~~~G~N~ 57 (300)
T d7a3ha_ 7 GQLSISNGELVNERGE---------QVQLKGM------------SSHGL--------QWYGQFVNYESMKWLRDDWGINV 57 (300)
T ss_dssp CSCEEETTEEECTTSC---------BCCCEEE------------EESCH--------HHHGGGCSHHHHHHHHHHTCCCE
T ss_pred CeEEEeCCEEECCCCC---------EEEEEEE------------eCCCc--------ccccccCCHHHHHHHHHHcCCCE
Confidence 3789999999997764 3233321 22232 2344567799999986 699999
Q ss_pred EEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 046395 197 VRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIID 276 (535)
Q Consensus 197 VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~ 276 (535)
||+|+.+. +.. ..+++..++.||++|++|.++||+||||+|..++... ..+.+++.++|+
T Consensus 58 VR~~~~~~----~~~-~~~~~~~~~~ld~~v~~a~~~Gl~Vild~h~~~~~~~---------------~~~~~~~~~~w~ 117 (300)
T d7a3ha_ 58 FRAAMYTS----SGG-YIDDPSVKEKVKEAVEAAIDLDIYVIIDWHILSDNDP---------------NIYKEEAKDFFD 117 (300)
T ss_dssp EEEEEESS----TTS-TTTCTTHHHHHHHHHHHHHHHTCEEEEEEECSSSCST---------------TTTHHHHHHHHH
T ss_pred EEEeeEcC----ccC-cccCHHHHHHHHHHHHHHHHCCCEEEEeeeecCCCCC---------------hhhHHHHHHHHH
Confidence 99998652 111 1246678999999999999999999999998654221 146788999999
Q ss_pred HHHHHhCCCCcEEEEEeecCCCCCCCC-hHHHHHHHHHHHHHHHhcCCCcEEEEcCC-CCCChhhhhcccCCCCcEEEEE
Q 046395 277 FLASRYADHPSLVAIELMNEPKAPDLK-LDSLKTYYKAGYDTVRKYSSSAYVILSNR-LGGEWSELLSFASNLSRVVIDV 354 (535)
Q Consensus 277 ~la~ry~~~p~V~~~el~NEP~~~~~~-~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g~~~~~~~~~~~~~~n~v~d~ 354 (535)
.|++|||++|.|+ |||+|||...... .+.++.++++++++||+++|+++|++++. |+.+.......+...++++|++
T Consensus 118 ~ia~ryk~~p~V~-~el~NEP~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~i~v~~~~~~~~~~~~~~~~~~~~niv~~~ 196 (300)
T d7a3ha_ 118 EMSELYGDYPNVI-YEIANEPNGSDVTWGNQIKPYAEEVIPIIRNNDPNNIIIVGTGTWSQDVHHAADNQLADPNVMYAF 196 (300)
T ss_dssp HHHHHHTTCTTEE-EECCSCCCSTTCCTTTTHHHHHHHHHHHHHTTCSSSCEEECCHHHHTBHHHHHTSCCSCTTEEEEE
T ss_pred HHHHHhCCCCcce-eeeecccCCCCCCchhHHHHHHHHHHHHHHhcCCCCceeecCCCcccccchhhcCCCCCCCEEEEE
Confidence 9999999999985 9999999865333 46799999999999999999999998762 3233333333345678999999
Q ss_pred eecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC-CCCCHHHHHHHHHHHHHHHhhCCcceE
Q 046395 355 HFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA-EGASKRDYQRFAEAQLDVYGRATFGWA 433 (535)
Q Consensus 355 H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~-~~~~~~~~~~~~~~ql~~~~~~~~Gw~ 433 (535)
|.|.++.. +...+ .+...... +.|+||||||+.... .... ...+.++.++.++++++||+
T Consensus 197 H~Y~~~~~-------~~~~~--------~~~~~~~~-~~Pv~~gEfG~~~~~~~~~~---~~~~~~~~~~~~~~~~igw~ 257 (300)
T d7a3ha_ 197 HFYAGTHG-------QNLRD--------QVDYALDQ-GAAIFVSEWGTSAATGDGGV---FLDEAQVWIDFMDERNLSWA 257 (300)
T ss_dssp EEETTSCC-------HHHHH--------HHHHHHHT-TCCEEEEEEESSCTTSCSCC---CHHHHHHHHHHHHHTTCCEE
T ss_pred CCccCcCc-------ccHHH--------HHHHHHhc-CCCEEEeecCCccCCCCCCc---CHHHHHHHHHHHHHcCCeEE
Confidence 99986421 11111 11222223 456999999976421 1111 12344555677888999999
Q ss_pred EEeeeeCC
Q 046395 434 YWAYKFAE 441 (535)
Q Consensus 434 ~W~~k~~~ 441 (535)
+|+|+...
T Consensus 258 ~W~~~~~~ 265 (300)
T d7a3ha_ 258 NWSLTHKD 265 (300)
T ss_dssp EEEESCCS
T ss_pred EEeCcCCC
Confidence 99998643
|
| >d1g01a_ c.1.8.3 (A:) Alkaline cellulase K catalytic domain {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alkaline cellulase K catalytic domain species: Bacillus sp. [TaxId: 1409]
Probab=100.00 E-value=5.6e-33 Score=285.73 Aligned_cols=239 Identities=18% Similarity=0.252 Sum_probs=164.9
Q ss_pred hCccchHHHHHHHHH-cCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCC
Q 046395 177 WKSYITEEDFKFMSQ-NGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSG 255 (535)
Q Consensus 177 w~~~ite~D~~~ik~-~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg 255 (535)
+..++++++++.|++ +|+|+||||+.+. +.+ ..+++..+++||++|++|.++|||||||+|..++....
T Consensus 48 ~~~~~~~~~~~~l~~~~G~N~VRlp~~~~----~~~-~~~~~~~~~~ld~~V~~a~~~GiyVIlD~H~~~~~~~~----- 117 (357)
T d1g01a_ 48 FGEIVNENAFVALSNDWGSNMIRLAMYIG----ENG-YATNPEVKDLVYEGIELAFEHDMYVIVDWHVHAPGDPR----- 117 (357)
T ss_dssp HGGGCSHHHHHHHHTTSCCSEEEEEEESS----SSS-TTTCTTHHHHHHHHHHHHHHTTCEEEEEEECCSSSCTT-----
T ss_pred cccccCHHHHHHHHHhcCCCEEEEeeeec----CCC-CccCHHHHHHHHHHHHHHHHCCCEEEEeecccCCCCCC-----
Confidence 445778999999985 8999999999753 222 23667789999999999999999999999987543210
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCCCCc--EEEEEeecCCCCCCC----------ChHHHHHHHHHHHHHHHhcCC
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYADHPS--LVAIELMNEPKAPDL----------KLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~--V~~~el~NEP~~~~~----------~~~~~~~~~~~~~~aIR~~~p 323 (535)
....+.+.++|++||+||+++|+ +++|||+|||+.... ....|+.++++++++||+.++
T Consensus 118 ---------~~~~~~~~~~W~~iA~ry~~~~~~~~v~~el~NEP~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IR~~~~ 188 (357)
T d1g01a_ 118 ---------ADVYSGAYDFFEEIADHYKDHPKNHYIIWELANEPSPNNNGGPGLTNDEKGWEAVKEYAEPIVEMLREKGD 188 (357)
T ss_dssp ---------SGGGTTHHHHHHHHHHHHTTCTTGGGEEEECCSCCCSCCTTSCCCCSSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ---------hhhhhhhHHHHHHHHHHHhcCcchHHHHHHHhhccccccCccccccCcchhHHHHHHHHHHHHHHHHhcCC
Confidence 24556788999999999999884 678999999986421 135789999999999999987
Q ss_pred CcEEEEcCCCCCChhhhhcccCCCCcEEEEEeecCcCCCcccCC---C-hhhhHHHHHHhhhHHHHHHhhcCCCcEEEec
Q 046395 324 SAYVILSNRLGGEWSELLSFASNLSRVVIDVHFYNLFWDNFNKM---S-VQQNIDYIYRQRSSDLRNVTTSDGPLSFVGE 399 (535)
Q Consensus 324 ~~~ii~~~~~g~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~---~-~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGE 399 (535)
+.+|+.+..|+.+.......+..++|+||++|+|.++....... . .....+.++ ..+..+.+. +.|+||||
T Consensus 189 ~~iiv~~~~w~~~~~~~~~~~~~~~nvvys~H~Y~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-g~Pv~vgE 263 (357)
T d1g01a_ 189 NMILVGNPNWSQRPDLSADNPIDAENIMYSVHFYTGSHGASHIGYPEGTPSSERSNVM----ANVRYALDN-GVAVFATE 263 (357)
T ss_dssp CCEEECCHHHHTCHHHHHHSCCSSSSEEEEEEEETTTSCCCCCCCCTTCCGGGCCCHH----HHHHHHHHT-TCCEEEEE
T ss_pred ceEEEecCCccccchhcccccCCCCCEEEEEEEecCccCCccCCCCcccchHHHHHHH----HHHHHHHHc-CCCEEEEe
Confidence 76555444454444444444456789999999997653211100 0 111111111 122233333 44599999
Q ss_pred cCCCcCC-CCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCC
Q 046395 400 WSCEWEA-EGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAES 442 (535)
Q Consensus 400 fg~~~~~-~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~ 442 (535)
||..... .+.. ...+.+..++.++++++||++|+|+....
T Consensus 264 fG~~~~~~~~~~---~~~~~~~~~~~~~~~~isw~~W~~~~~~~ 304 (357)
T d1g01a_ 264 WGTSQANGDGGP---YFDEADVWLNFLNKHNISWANWSLTNKNE 304 (357)
T ss_dssp EESSBTTTBSCC---CHHHHHHHHHHHHHTTCCEEEEEECCSSS
T ss_pred cCCcCCCCCCCc---CHHHHHHHHHHHHHcCCceEEEeCcCCCC
Confidence 9975421 1111 12344455678888999999999987543
|
| >d1wkya2 c.1.8.3 (A:34-330) Beta-mannanase {Bacillus sp. JAMB-602 [TaxId: 244966]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Bacillus sp. JAMB-602 [TaxId: 244966]
Probab=100.00 E-value=3.3e-32 Score=272.08 Aligned_cols=223 Identities=14% Similarity=0.201 Sum_probs=167.0
Q ss_pred hhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCC
Q 046395 176 HWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSG 255 (535)
Q Consensus 176 hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg 255 (535)
.|....+++||+.||++|+|+||||+.+ +..|.++.+++||++|++|.++||+||||+|..++..
T Consensus 28 ~~~~~~~~~d~~~~~~~G~N~VRl~~~~--------~~~~~~~~~~~ld~~v~~a~~~Gi~vildlh~~~~~~------- 92 (297)
T d1wkya2 28 AWYKDQATTAIEGIANTGANTVRIVLSD--------GGQWTKDDIQTVRNLISLAEDNNLVAVLEVHDATGYD------- 92 (297)
T ss_dssp GGCGGGHHHHHHHHHTTTCSEEEEEECC--------SSSSCCCCHHHHHHHHHHHHHTTCEEEEEECTTTTCC-------
T ss_pred ccCchHHHHHHHHHHHCCCcEEEEeccC--------CCccCccHHHHHHHHHHHHHHCCCceEeecccccccc-------
Confidence 3555567999999999999999999965 2347778899999999999999999999999765321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-CCC
Q 046395 256 SRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-RLG 334 (535)
Q Consensus 256 ~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~~g 334 (535)
.....+.++++|+.+++||+++|+|++|+++|||.. ......+..++++++++||+.+|+++|++++ .|+
T Consensus 93 --------~~~~~~~~~~~w~~~a~~~~~~p~v~~~~l~NEp~~-~~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~ 163 (297)
T d1wkya2 93 --------SIASLNRAVDYWIEMRSALIGKEDTVIINIANEWFG-SWDGAAWADGYKQAIPRLRNAGLNNTLMIDAAGWG 163 (297)
T ss_dssp --------CHHHHHHHHHHHHHTGGGTTTCTTTEEEECCTTCCC-SSCHHHHHHHHHHHHHHHHHTTCCSCEEEECBTTT
T ss_pred --------ccccHHHHHHHHHHHHHHhcCCCCEEEEeccccccc-cchhhhhhhhhhhhHHHHHhcCCCceEEEecCCcc
Confidence 136788999999999999999999999999999986 4456789999999999999999999998865 454
Q ss_pred CChhhhhc------ccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCC
Q 046395 335 GEWSELLS------FASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEG 408 (535)
Q Consensus 335 ~~~~~~~~------~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~ 408 (535)
.+...+.. ......+++|++|.|..+... .. .+.. .+...... +.|++|||||+......
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~i~y~~H~Y~~~~~~-----~~----~~~~----~~~~~~~~-g~Pv~vgEfG~~~~~~~ 229 (297)
T d1wkya2 164 QFPQSIHDYGREVFNADPQRNTMFSIHMYEYAGGN-----AS----QVRT----NIDRVLNQ-DLALVIGEFGHRHTNGD 229 (297)
T ss_dssp TBTHHHHHHHHHHHHTCTTCCEEEEEEESTTTSSS-----HH----HHHH----HHHHHHTT-TCCEEEEEECSEETTEE
T ss_pred cccchhhhccccccCCCcccceeEeeccccCCCCC-----hh----hHHH----HHHHHhhc-CCCEEEEeecccCCCCc
Confidence 43332211 125678999999999765321 11 1111 12223333 45699999998643222
Q ss_pred CCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCCC
Q 046395 409 ASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAESP 443 (535)
Q Consensus 409 ~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~ 443 (535)
.. .+.+++.++++++||++|+|+...+.
T Consensus 230 ~~-------~~~~~~~~~~~~~gw~~W~~~~~~~~ 257 (297)
T d1wkya2 230 VD-------ESTIMSYSEQRGVGWLAWSWKGNGPE 257 (297)
T ss_dssp CC-------HHHHHHHHHHTTCEEEESCSSCCCGG
T ss_pred HH-------HHHHHHHHHHcCCeEEEEEEECCCCC
Confidence 22 23345667778999999999985443
|
| >d1edga_ c.1.8.3 (A:) Endoglucanase CelA {Clostridium cellulolyticum [TaxId: 1521]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase CelA species: Clostridium cellulolyticum [TaxId: 1521]
Probab=100.00 E-value=7.1e-32 Score=279.95 Aligned_cols=255 Identities=17% Similarity=0.218 Sum_probs=182.5
Q ss_pred HhhhC-ccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCC
Q 046395 174 RDHWK-SYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSP 252 (535)
Q Consensus 174 ~~hw~-~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~ 252 (535)
+.-|. ..+|+++|+.||++|||+|||||.|+.+.++.++ .+++..|++|+++|++|.++||+||||+|+.++.+++..
T Consensus 54 e~~Wgnp~~t~~~i~~ik~~Gfn~vRiPv~w~~~~~~~~~-~i~~~~l~~v~~vV~~a~~~Gl~VIldlHh~~~~~~~~~ 132 (380)
T d1edga_ 54 ETSWSGIKTTKQMIDAIKQKGFNTVRIPVSWHPHVSGSDY-KISDVWMNRVQEVVNYCIDNKMYVILNTHHDVDKVKGYF 132 (380)
T ss_dssp HHHTTCSCCCHHHHHHHHHHTCCEEEECCCCGGGEETTTT-EECHHHHHHHHHHHHHHHTTTCEEEEECCSCBCTTTSBC
T ss_pred CCccCCccccHHHHHHHHHcCCCEEEEcccHHHhcCCCCC-ccCHHHHHHHHHHHHHHHHcCCEEEEecccCCCCCcccC
Confidence 56686 4689999999999999999999999877665543 367889999999999999999999999999887665443
Q ss_pred CCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCC---------------hHHHHHHHHHHHH
Q 046395 253 HSGSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLK---------------LDSLKTYYKAGYD 316 (535)
Q Consensus 253 ~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~---------------~~~~~~~~~~~~~ 316 (535)
.. .|. ....+++.++|++||+||+++|.+++||++|||+..... ...+.++++.+++
T Consensus 133 ~~-------~~~~~~~~~~~~~~W~qiA~~fkd~~~~l~fel~NEP~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 205 (380)
T d1edga_ 133 PS-------SQYMASSKKYITSVWAQIAARFANYDEHLIFEGMNEPRLVGHANEWWPELTNSDVVDSINCINQLNQDFVN 205 (380)
T ss_dssp SS-------GGGHHHHHHHHHHHHHHHHHHTTTCCTTEEEECCSSCCCTTSTTTTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred Cc-------ccCcHHHHHHHHHHHHHHHHhhcCCCceEEEeecccccccCCccccccccccccHHHHHHHHHHHHHHHHH
Confidence 22 222 567889999999999999999999999999999863211 2357899999999
Q ss_pred HHHhcC---CCcEEEEcCC-CCCCh--hhhhc----ccCCCCcEEEEEeecCcCCCcccCC------------ChhhhHH
Q 046395 317 TVRKYS---SSAYVILSNR-LGGEW--SELLS----FASNLSRVVIDVHFYNLFWDNFNKM------------SVQQNID 374 (535)
Q Consensus 317 aIR~~~---p~~~ii~~~~-~g~~~--~~~~~----~~~~~~n~v~d~H~Y~~~~~~~~~~------------~~~~~i~ 374 (535)
+||+.+ +.+++++++. ++.+. ..... ....++++++++|+|.|+. |.+. .......
T Consensus 206 ~IR~~~~~n~~r~i~v~g~~~~~~~~~~~~~~~p~d~~~~~~~li~s~H~Y~p~~--f~~~~~~~~~~~~~~~~~~~~~~ 283 (380)
T d1edga_ 206 TVRATGGKNASRYLMCPGYVASPDGATNDYFRMPNDISGNNNKIIVSVHAYCPWN--FAGLAMADGGTNAWNINDSKDQS 283 (380)
T ss_dssp HHHHTCGGGGTSCEEEECGGGCHHHHHSTTCCCCCCCTTCCSCEEEEEECCCSHH--HHTSCGGGTCCCCCCTTCHHHHH
T ss_pred HHHHhccCCCceEEEeCCCccCCccccchhhcccccccCCCCCEEEEEeecCccc--cccccCCcCCCCccccCccccHH
Confidence 999986 4567777652 21111 11111 1234689999999998753 2111 1111222
Q ss_pred HHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCCC
Q 046395 375 YIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAES 442 (535)
Q Consensus 375 ~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~ 442 (535)
.+...... +..+...++.|++|||||+... .......+|++.+++.+.+.+++|+||......+
T Consensus 284 ~i~~~~~~-~~~~~~~~giPviiGEfG~~~~---~~~~~r~~~~~~~~~~a~~~gi~~~~Wdn~~~~~ 347 (380)
T d1edga_ 284 EVTWFMDN-IYNKYTSRGIPVIIGECGAVDK---NNLKTRVEYMSYYVAQAKARGILCILWDNNNFSG 347 (380)
T ss_dssp HHHHHHHH-HHHHTGGGTCCEEEEEECCCCS---SCHHHHHHHHHHHHHHHHHTTCEEEECCCCCCSS
T ss_pred HHHHHHHH-HHHHHHhcCceEEEecccCcCC---CChHHHHHHHHHHHHHHHHcCCcEEEECCCCCCC
Confidence 22222222 3333334455699999998654 2345566788888888888999999997655433
|
| >d1egza_ c.1.8.3 (A:) Endoglucanase Cel5a {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Erwinia chrysanthemi [TaxId: 556]
Probab=99.98 E-value=6e-32 Score=270.47 Aligned_cols=244 Identities=17% Similarity=0.229 Sum_probs=174.6
Q ss_pred cchHHHHHHHH-HcCCCEEEeCCccccccCCCCCCC-CccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMS-QNGLNAVRIPVGWWIAYDPKPPKP-FVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSR 257 (535)
Q Consensus 180 ~ite~D~~~ik-~~G~N~VRipv~~w~~~~p~~~~~-~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~ 257 (535)
+.++++++.|+ ++|+|+||+|+.... ..+.. ..+..++.||++|++|.++||+||||+|..++
T Consensus 38 ~~~~~~~~~l~~~~G~N~vR~~~~~~~----~~~~~~~~~~~~~~ld~vv~~a~~~Giyvild~h~~~~----------- 102 (291)
T d1egza_ 38 FYTADTVASLKKDWKSSIVRAAMGVQE----SGGYLQDPAGNKAKVERVVDAAIANDMYAIIGWHSHSA----------- 102 (291)
T ss_dssp GCSHHHHHHHHHTTCCCEEEEEEECSS----TTSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG-----------
T ss_pred ccCHHHHHHHHHhcCCCEEEEeccccc----cCCcccCcHHHHHHHHHHHHHHHHCCCeEeeeeccCCC-----------
Confidence 56789999998 589999999997532 12211 23457999999999999999999999997532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-CCCCC
Q 046395 258 DGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-RLGGE 336 (535)
Q Consensus 258 ~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~~g~~ 336 (535)
....+.+.++|+.||+|||++|.|+ |||+|||... .....++.++++++++||+++|+++|++++ .|+.+
T Consensus 103 -------~~~~~~~~~~w~~la~ryk~~p~v~-~el~NEP~~~-~~~~~~~~~~~~~~~~IR~~d~~~~I~v~~~~~~~~ 173 (291)
T d1egza_ 103 -------ENNRSEAIRFFQEMARKYGNKPNVI-YEIYNEPLQV-SWSNTIKPYAEAVISAIRAIDPDNLIIVGTPSWSQN 173 (291)
T ss_dssp -------GGGHHHHHHHHHHHHHHHTTSTTEE-EECCSCCCSC-CTTTTHHHHHHHHHHHHHHHCSSSCEEECCHHHHTC
T ss_pred -------cccHHHHHHHHHHHHHHhCCCccee-eeeccCcCCC-cchhhHHHHHHHHHHHHHhcCCCcEEEEecCCcccc
Confidence 2567899999999999999999985 9999999863 345678999999999999999999998875 34445
Q ss_pred hhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcC-CCCCCHHHHH
Q 046395 337 WSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWE-AEGASKRDYQ 415 (535)
Q Consensus 337 ~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~-~~~~~~~~~~ 415 (535)
.......+...++++|++|+|.++.. +. ... .+..... .+.|+||||||.... ...+. ..
T Consensus 174 ~~~~~~~~~~~~n~vys~H~Y~~~~~-------~~----~~~----~~~~~~~-~~~Pv~vgEfG~~~~~~~~~~---~~ 234 (291)
T d1egza_ 174 VDEASRDPINAKNIAYTLHFYAGTHG-------ES----LRN----KARQALN-NGIALFVTEWGTVNADGNGGV---NQ 234 (291)
T ss_dssp HHHHHTSCCCSSSEEEEEEEETTTCC-------HH----HHH----HHHHHHH-TTCCEEEEEEESSCTTSCSCC---CH
T ss_pred cchhhhcccCCCcEEEEecccCCCCc-------hh----HHH----HHHHHHH-cCCCeEecccCCcccCCCCCc---CH
Confidence 44444444567899999999987532 11 111 1112222 345699999997532 11111 13
Q ss_pred HHHHHHHHHHhhCCcceEEEeeeeCCCCCCceeccCCCccccccccccccccCcCC
Q 046395 416 RFAEAQLDVYGRATFGWAYWAYKFAESPQKALTLSSSTLSSLHWQTQVTHIFSSLN 471 (535)
Q Consensus 416 ~~~~~ql~~~~~~~~Gw~~W~~k~~~~~~~~~~l~~~~~~~~~W~~~~~~~~~~l~ 471 (535)
.+++..++.++++++||++|+|+.. +.... .+.+.. ..+++.++++|+.|.
T Consensus 235 ~~~~~~~~~~~~~~i~w~~W~~~~~-~~~~~-~~~~~~---~~~t~~G~~~k~~~~ 285 (291)
T d1egza_ 235 TETDAWVTFMRDNNISNANWALNDK-NEGAS-TYYPDS---KNLTESGKKVKSIIQ 285 (291)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCS-SSTTC-SBCTTS---CCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEEEeeeCC-CCCee-eecCCC---CCcCHHHHHHHHHHh
Confidence 4455667888899999999999854 32222 222222 356677777776664
|
| >d1tvna1 c.1.8.3 (A:1-293) Endoglucanase Cel5a {Pseudoalteromonas haloplanktis [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase Cel5a species: Pseudoalteromonas haloplanktis [TaxId: 228]
Probab=99.98 E-value=2e-31 Score=266.80 Aligned_cols=220 Identities=17% Similarity=0.251 Sum_probs=163.6
Q ss_pred cchHHHHHHHH-HcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC
Q 046395 180 YITEEDFKFMS-QNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD 258 (535)
Q Consensus 180 ~ite~D~~~ik-~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~ 258 (535)
++++++++.|+ ++|+|+||+||.++...+ .....+.+..++.||++|++|.++||+||||+|....
T Consensus 38 ~~~~~~~~~l~~~~g~N~VR~~~~~~~~~~-~~~~~~~~~~l~~ld~~v~~a~~~gi~vild~h~~~~------------ 104 (293)
T d1tvna1 38 FYTAETVAKAKTEFNATLIRAAIGHGTSTG-GSLNFDWEGNMSRLDTVVNAAIAEDMYVIIDFHSHEA------------ 104 (293)
T ss_dssp GCSHHHHHHHHHHHCCSEEEEEEECCTTST-TSTTTCHHHHHHHHHHHHHHHHHTTCEEEEEEECSCG------------
T ss_pred ccCHHHHHHHHHhCCCcEEEEecccccccc-cccccCcHHHHHHHHHHHHHHHHcCCEEEecCccCCC------------
Confidence 45689999887 689999999998754322 2223355678999999999999999999999997522
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC-CCCCCh
Q 046395 259 GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN-RLGGEW 337 (535)
Q Consensus 259 ~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~-~~g~~~ 337 (535)
..+.+.+.++|++||+||+++|.|+ |||+|||... .....+++++++++++||+++|+++|++++ .|..+.
T Consensus 105 ------~~~~~~~~~~w~~~a~r~k~~~~V~-~el~NEP~~~-~~~~~~~~~~~~~~~~Ir~~dp~~~I~v~g~~~~~~~ 176 (293)
T d1tvna1 105 ------HTDQATAVRFFEDVATKYGQYDNVI-YEIYNEPLQI-SWVNDIKPYAETVIDKIRAIDPDNLIVVGTPTWSQDV 176 (293)
T ss_dssp ------GGCHHHHHHHHHHHHHHHTTCTTEE-EECCSCCCSC-CTTTTHHHHHHHHHHHHHTTCCSCEEEECCHHHHTCH
T ss_pred ------cccHHHHHHHHHHHHHHhCCCCeEE-EEEecccCCC-CcHHHHHHHHHHHHHHHhhcCCCcEEEEeCCcccccc
Confidence 1467899999999999999999997 9999999863 335679999999999999999999999976 333444
Q ss_pred hhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC--CCCCHHHHH
Q 046395 338 SELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA--EGASKRDYQ 415 (535)
Q Consensus 338 ~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~--~~~~~~~~~ 415 (535)
......+..+.+++|++|+|.++.. +...+. +...... +.|++|||||..... .....
T Consensus 177 ~~~~~~~~~~~~~v~s~H~Y~~~~~-------~~~~~~--------~~~~~~~-g~Pv~vgEfG~~~~~~~~~~~~---- 236 (293)
T d1tvna1 177 DVASQNPIDRANIAYTLHFYAGTHG-------QSYRNK--------AQTALDN-GIALFATEWGTVNADGNGGVNI---- 236 (293)
T ss_dssp HHHHHSCCCSSSEEEEEEEETTTCC-------HHHHHH--------HHHHHHT-TCCEEEEEEESSCTTSCSCCCH----
T ss_pred chhhcCCccCCCceEEEEeeccccc-------hHHHHH--------HHHHHhc-CCCeEeeccCCcccCCCCCCCH----
Confidence 4444445677899999999987531 111111 2222233 456999999975321 11222
Q ss_pred HHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 416 RFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 416 ~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
.+.++.++.++++++||++|+|+..
T Consensus 237 ~~~~~~~~~~~~~~igw~~W~~~d~ 261 (293)
T d1tvna1 237 NETDAWMAFFKTNNISHANWALNDK 261 (293)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCS
T ss_pred HHHHHHHHHHHHhCCeEEEEEeecC
Confidence 3344456777778899999999864
|
| >d1bqca_ c.1.8.3 (A:) Beta-mannanase {Thermomonospora fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Thermomonospora fusca [TaxId: 2021]
Probab=99.97 E-value=4.3e-30 Score=257.35 Aligned_cols=219 Identities=16% Similarity=0.244 Sum_probs=159.9
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
+++|+.||++|+|+||||+.++ ..+.+..++.++++|++|.++||+||||+|..++.+.+..
T Consensus 35 ~~~~~~i~~~G~N~VRl~~~~~--------~~~~~~~~~~~~~~v~~a~~~Gi~vildlh~~~~~~~~~~---------- 96 (302)
T d1bqca_ 35 TQAFADIKSHGANTVRVVLSNG--------VRWSKNGPSDVANVISLCKQNRLICMLEVHDTTGYGEQSG---------- 96 (302)
T ss_dssp TTHHHHHHHTTCSEEEEEECCS--------SSSCCCCHHHHHHHHHHHHHTTCEEEEEEGGGTTTTTSTT----------
T ss_pred HHHHHHHHhcCCCEEEEecccc--------cccCcchHHHHHHHHHHHHHCCCEEEEEecccccccCCCc----------
Confidence 5789999999999999999763 2356668999999999999999999999998765443211
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC-CChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-CCCChhhh
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD-LKLDSLKTYYKAGYDTVRKYSSSAYVILSNR-LGGEWSEL 340 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~-~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g~~~~~~ 340 (535)
+...+.+.++|+.|++||+++|.|++|+|+|||.... .....+..++++++++||+.+|+++|++++. |+.++...
T Consensus 97 --~~~~~~~~~~w~~ia~~~~~~p~vv~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir~~d~~~~i~v~~~~~~~~~~~~ 174 (302)
T d1bqca_ 97 --ASTLDQAVDYWIELKSVLQGEEDYVLINIGNEPYGNDSATVAAWATDTSAAIQRLRAAGFEHTLVVDAPNWGQDWTNT 174 (302)
T ss_dssp --CCCHHHHHHHHHHTHHHHTTCTTTEEEECSSSCCCSCHHHHTTHHHHHHHHHHHHHHTTCCSCEEEECTTTTTCTTCH
T ss_pred --hHHHHHHHHHHHHHHHHhcCCCCEEEEeccccccCCCCcchhhhHHHHHHHHHHHHHcCCCcEEEEcCccccccchhh
Confidence 2467899999999999999999999999999998532 1235688999999999999999999999753 43333221
Q ss_pred h-------cccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHH
Q 046395 341 L-------SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRD 413 (535)
Q Consensus 341 ~-------~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~ 413 (535)
. .......+++|++|.|.++.. . ..+.. .+...... +.|++|||||........
T Consensus 175 ~~~~~~~~~~~~~~~~~vy~~H~Y~~~~~------~----~~~~~----~~~~~~~~-~~Pv~vgEfG~~~~~~~~---- 235 (302)
T d1bqca_ 175 MRNNADQVYASDPTGNTVFSIHMYGVYSQ------A----STITS----YLEHFVNA-GLPLIIGEFGHDHSDGNP---- 235 (302)
T ss_dssp HHHHHHHHHHTCTTCCEEEEEEESGGGCS------H----HHHHH----HHHHHHHH-TCCEEEEEECCTTSTTCC----
T ss_pred hccchhccccCCcccceEEEeeecCCCCC------H----HHHHH----HHHHhhhc-CCcEEEEecCCcCCCCcH----
Confidence 1 112456789999999987632 1 11111 12222233 445999999976432222
Q ss_pred HHHHHHHHHHHHhhCCcceEEEeeeeCCCC
Q 046395 414 YQRFAEAQLDVYGRATFGWAYWAYKFAESP 443 (535)
Q Consensus 414 ~~~~~~~ql~~~~~~~~Gw~~W~~k~~~~~ 443 (535)
+.+.+++.++++++||++|+|+.+.+.
T Consensus 236 ---~~~~~~~~~~~~~~g~~~W~~~~~~~~ 262 (302)
T d1bqca_ 236 ---DEDTIMAEAERLKLGYIGWSWSGNGGG 262 (302)
T ss_dssp ---CHHHHHHHHHHHTCEEEESCSSCCCTT
T ss_pred ---HHHHHHHHHHHcCCeEEEEEecCCCCC
Confidence 233445566667899999999876444
|
| >d1qnra_ c.1.8.3 (A:) Beta-mannanase {Trichoderma reesei [TaxId: 51453]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Trichoderma reesei [TaxId: 51453]
Probab=99.93 E-value=6.3e-25 Score=222.27 Aligned_cols=244 Identities=18% Similarity=0.216 Sum_probs=157.7
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCC-------------CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPP-------------KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQ 248 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~-------------~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ 248 (535)
.+++|+.|+++|+|+||+++..+...++.++ ..+.+..++.||+++++|+++||+|||++|..++..
T Consensus 38 ~~~~l~~~~~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~a~~~Gi~vi~~l~~~~~~~ 117 (344)
T d1qnra_ 38 VDSTFSHISSSGLKVVRVWGFNDVNTQPSPGQIWFQKLSATGSTINTGADGLQTLDYVVQSAEQHNLKLIIPFVNNWSDY 117 (344)
T ss_dssp HHHHHHHHHHTTCCEEECCCCCEESSCCSTTCCCSEECCTTCCEECCSTTTTHHHHHHHHHHHHHTCEEEEESCBSSSTT
T ss_pred HHHHHHHHHhcCCCEEEECCcccccccCCCCccchhhcccccCccccCHHHHHHHHHHHHHHHHcCCeeEeeccCCcccc
Confidence 3899999999999999998765443333221 124567899999999999999999999999765433
Q ss_pred CCCCC----CCCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCC
Q 046395 249 NGSPH----SGSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSS 323 (535)
Q Consensus 249 ng~~~----sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p 323 (535)
.+... .+ ......|. +..++.+.++|+.+++||+++|+|++|+|.|||.........+..|+++++++||+.+|
T Consensus 118 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~p~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~ir~~d~ 196 (344)
T d1qnra_ 118 GGINAYVNAFG-GNATTWYTNTAAQTQYRKYVQAVVSRYANSTAIFAWELGNEPRCNGCSTDVIVQWATSVSQYVKSLDS 196 (344)
T ss_dssp SHHHHHHHHHC-SCTTGGGGCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSCCCTTCCTHHHHHHHHHHHHHHHHHCS
T ss_pred ccccccccccc-cccccccCCHHHHHHHHHHHHHHHHHhCCCCceeeeccCCccCCCCCchhhhhHHHHHHHHHHHhhCC
Confidence 21100 00 00111222 67889999999999999999999999999999987767778899999999999999999
Q ss_pred CcEEEEcCC-CCCChh------------hhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhc
Q 046395 324 SAYVILSNR-LGGEWS------------ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTS 390 (535)
Q Consensus 324 ~~~ii~~~~-~g~~~~------------~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~ 390 (535)
+++|+++.. ++.... .+.........+++++|.|...... ........+.. .+... +.
T Consensus 197 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~~~~H~Y~~~~~~----~~~~~~~~~~~----~~~~~-~~ 267 (344)
T d1qnra_ 197 NHLVTLGDEGLGLSTGDGAYPYTYGEGTDFAKNVQIKSLDFGTFHLYPDSWGT----NYTWGNGWIQT----HAAAC-LA 267 (344)
T ss_dssp SSEEECCCCCCCCTTSCCCGGGSSSSSCCHHHHHTCTTCCSEEEEECHHHHTC----CSTHHHHHHHH----HHHHH-HH
T ss_pred CCEEEEccccccccccccccccccccccchhhcccCCCceEEEEeecCccccc----chhHHHHHHHH----HHHHH-hh
Confidence 999888642 211100 0011112234468999999542110 11111111111 12222 23
Q ss_pred CCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeCC
Q 046395 391 DGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFAE 441 (535)
Q Consensus 391 ~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~~ 441 (535)
.+.|++|||||...+. ......+... .......+||++|+|....
T Consensus 268 ~~kPv~v~EfG~~~~~----~~~~~~~~~~--~~~~~~~~G~~~W~~~~~~ 312 (344)
T d1qnra_ 268 AGKPCVFEEYGAQQNP----CTNEAPWQTT--SLTTRGMGGDMFWQWGDTF 312 (344)
T ss_dssp TTSCEEEEEECCSSCH----HHHHHHHHHH--HHTSTTEEEEEESCEECBC
T ss_pred cCCCEEEEecCcCCCC----CccHHHHHHH--HHhccCcceEEEEEcCccc
Confidence 3456999999975321 1111222211 2223355799999998754
|
| >d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-mannanase species: Tomato (Lycopersicon esculentum) [TaxId: 4081]
Probab=99.92 E-value=7.9e-24 Score=215.15 Aligned_cols=258 Identities=14% Similarity=0.170 Sum_probs=162.6
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccc---cCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCC------
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIA---YDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSP------ 252 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~---~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~------ 252 (535)
.+++|+.||++|+|+||+++.++.. .++.++. +++..++.||++|++|.++||+||+|+|...+...+..
T Consensus 41 ~~~~l~~~k~~G~N~vR~~~~~~~~~~~~~~~~g~-~~~~~l~~ld~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~~~~~~ 119 (370)
T d1rh9a1 41 VTNTFQQASKYKMNVARTWAFSHGGSRPLQSAPGV-YNEQMFQGLDFVISEAKKYGIHLIMSLVNNWDAFGGKKQYVEWA 119 (370)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCSSSSSCSEEETTE-ECHHHHHHHHHHHHHHHHTTCEEEEECCBSSSSSSBHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEECCccCccCcccCCCCCc-ccHHHHHHHHHHHHHHHHcCCEEEEecccccccccCCccccccc
Confidence 3899999999999999998765332 3334443 78889999999999999999999999996543221100
Q ss_pred C-CC--CCCCCCCCC-hHHHHHHHHHHHHHHHH--------hCCCCcEEEEEeecCCCCC-CCChHHHHHHHHHHHHHHH
Q 046395 253 H-SG--SRDGFQEWS-DSDIQETVAIIDFLASR--------YADHPSLVAIELMNEPKAP-DLKLDSLKTYYKAGYDTVR 319 (535)
Q Consensus 253 ~-sg--~~~~~~~W~-~~~~~~~~~~~~~la~r--------y~~~p~V~~~el~NEP~~~-~~~~~~~~~~~~~~~~aIR 319 (535)
. .+ .......|. +...+.+.++++.+++| |+++|.|++|+++|||... ......+++|+++++++||
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~v~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~ir 199 (370)
T d1rh9a1 120 VQRGQKLTSDDDFFTNPMVKGFYKNNVKVVLTRVNTITKVAYKDDPTILSWELINEPRCPSDLSGKTFQNWVLEMAGYLK 199 (370)
T ss_dssp HHTTCCCCCGGGGGTCHHHHHHHHHHHHHHHHCBCTTTCSBGGGCTTEEEEESCBSCCCTTCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCcCCccccccCCHHHHHHHHHHHHHHHHhhhhhhHhhhcCCceeeeeccccccccCCccchHHHHHHHHHHHHHHH
Confidence 0 00 001111233 67788899999999987 5899999999999999764 3456789999999999999
Q ss_pred hcCCCcEEEEcCC-C-CCChhhhhc-----------ccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHH
Q 046395 320 KYSSSAYVILSNR-L-GGEWSELLS-----------FASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRN 386 (535)
Q Consensus 320 ~~~p~~~ii~~~~-~-g~~~~~~~~-----------~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~ 386 (535)
+++|+++|+++.. + +........ ........++++|.|...... ....................
T Consensus 200 ~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~h~Y~~~~~~--~~~~~~~~~~~~~~~~~~~~- 276 (370)
T d1rh9a1 200 SIDSNHLLEIGLEGFYGNDMRQYNPNSYIFGTNFISNNQVQGIDFTTIHMYPNQWLP--GLTQEAQDKWASQWIQVHID- 276 (370)
T ss_dssp HHCCSSEEECCCCCCCCGGGGGGSGGGCCCSCCHHHHHTSTTCCCEEEECCHHHHST--TSCHHHHHHHHHHHHHHHHH-
T ss_pred hhCCCCeEEEeccccccccccccCCCcccccccccccccCCcceEEEeccccCcccc--CCcchhhhhHHHHHHHHHHH-
Confidence 9999999887642 1 100000000 001223457899999642111 11111111112111111122
Q ss_pred HhhcCCCcEEEeccCCCcCCCCCCHHHHH----HHHHHHHHHHhhC--CcceEEEeeeeCCCC
Q 046395 387 VTTSDGPLSFVGEWSCEWEAEGASKRDYQ----RFAEAQLDVYGRA--TFGWAYWAYKFAESP 443 (535)
Q Consensus 387 ~~~~~~p~v~vGEfg~~~~~~~~~~~~~~----~~~~~ql~~~~~~--~~Gw~~W~~k~~~~~ 443 (535)
..+..+.|++|||||......+....... .++....+..... ..||+||+|+++..+
T Consensus 277 ~~~~~~kPv~i~EfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~~~ 339 (370)
T d1rh9a1 277 DSKMLKKPLLIAEFGKSTKTPGYTVAKRDNYFEKIYGTIFNCAKSGGPCGGGLFWQVLGQGMS 339 (370)
T ss_dssp HHHHHTSCEEEEECCCCTTSTTCCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCBCCTTCG
T ss_pred HHHhCCCeEEEeeccCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEeeecCCCCc
Confidence 22233456999999987655444443332 3333333333332 269999999987544
|
| >d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exomannosidase species: Cellvibrio mixtus [TaxId: 39650]
Probab=99.89 E-value=7.1e-22 Score=202.39 Aligned_cols=259 Identities=14% Similarity=0.181 Sum_probs=163.2
Q ss_pred HHHHHHHHHcCCCEEEeCCcccc---------ccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWI---------AYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPH 253 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~---------~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~ 253 (535)
+++|+.||++|+|+||+++.+.. ..++.++. |++..++.||++|++|+++||+||+|+|.......+...
T Consensus 44 ~~~l~~~k~~G~N~iR~~~~~~~~~~~~~~~~~~~~~~g~-~de~gl~~~d~~l~~a~~~Gi~vi~~l~~~~~~~~~~~~ 122 (410)
T d1uuqa_ 44 AKELDNLKAIGVNNLRVLAVSEKSEINSAVKPAVTNGFGN-YDETLLQGLDYLLVELAKRDMTVVLYFNNFWQWSGGMTQ 122 (410)
T ss_dssp HHHHHHHHHTTCCEEEEECCCBCCCSTTSCSSCSBSSTTC-BCHHHHHHHHHHHHHHHHTTCEEEEECCBSSSTTCHHHH
T ss_pred HHHHHHHHHCCCcEEEeCCcccccccccccCCCccccccc-ccHHHHHHHHHHHHHHHHcCCeeEEeccccccccCCccc
Confidence 89999999999999999776422 23444444 888899999999999999999999999976433211000
Q ss_pred -----CCCCCCC--------------CCC--ChHHHHHHHHHHHHHHHH--------hCCCCcEEEEEeecCCCCCCC--
Q 046395 254 -----SGSRDGF--------------QEW--SDSDIQETVAIIDFLASR--------YADHPSLVAIELMNEPKAPDL-- 302 (535)
Q Consensus 254 -----sg~~~~~--------------~~W--~~~~~~~~~~~~~~la~r--------y~~~p~V~~~el~NEP~~~~~-- 302 (535)
.+..... ..| .+...+.+.+.++.+++| |+++|.|++|+|.|||.....
T Consensus 123 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~l~NE~~~~~~~~ 202 (410)
T d1uuqa_ 123 YMAWIEGEPVQDPNVTNEWEAFMAKSASFYRSEKAQQEYRKTLEKIITRVNSINGKAYVDDATIMSWQLANEPRPGNSQT 202 (410)
T ss_dssp HHHHHHTCCCCCHHHHCCHHHHHHHHHGGGGCHHHHHHHHHHHHHHHTCBCTTTCCBGGGCTTEEEEESCBSCCSCSTTC
T ss_pred ccccccCCCcCccccccccccccccccccccCHHHHHHHHHHHHHHHHhhhhhhhHhhcCChhHhhhhhccccCCccCcc
Confidence 0000000 001 156678888999999987 789999999999999986422
Q ss_pred ---ChHHHHHHHHHHHHHHHhcCCCcEEEEcCC-CC---CChhhhhcccCCCCcEEEEEeecCcCCCcccCCChhhh---
Q 046395 303 ---KLDSLKTYYKAGYDTVRKYSSSAYVILSNR-LG---GEWSELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQN--- 372 (535)
Q Consensus 303 ---~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~-~g---~~~~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~--- 372 (535)
..+.+..+++.++++||+++|+++|.++.. +. ................++++|.|...............
T Consensus 203 ~~~~~~~~~~~~~~~~~~i~~~dp~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~s~h~Y~~~~~~~~~~~~~~~~~~ 282 (410)
T d1uuqa_ 203 TAEEKQIYIDWVHAAAAYIKTLDAHHLVSSGSEGEMGSVNDMQVFIDAHATPDIDYLTYHMWIRNWSWFDKTKPAETWPS 282 (410)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCCSGGGTTTCHHHHHHHHCSTTCCSEEEEECTTTTTSSCTTSHHHHHHH
T ss_pred cccchhhhhHHHHHHHhhhhhcCCCceEeecccccccccccccchhhhccCCccceEEeecCcccccccccccccccccc
Confidence 246788999999999999999999887542 11 22222222223345678899999654322221111111
Q ss_pred -HHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCC----C---HHH-HHHHHHHHHHHHhhC--CcceEEEeeeeCC
Q 046395 373 -IDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGA----S---KRD-YQRFAEAQLDVYGRA--TFGWAYWAYKFAE 441 (535)
Q Consensus 373 -i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~----~---~~~-~~~~~~~ql~~~~~~--~~Gw~~W~~k~~~ 441 (535)
.......... ...+.+..+.|++|+|||........ . .+. ...+++.+...+... .+|+++|+|+...
T Consensus 283 ~~~~~~~~~~~-~~~~~~~~~kPv~i~E~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~W~~~~~~ 361 (410)
T d1uuqa_ 283 AWEKAQNYMRA-HIDVAKQLNKPLVLEEFGLDRDMGSYAMDSTTEYRDNYFRGVFELMLASLEQGEPSAGYNIWAWNGYG 361 (410)
T ss_dssp HHHHHHHHHHH-HHHHHHHHTCCEEEEEECCCCGGGCCCTTSCCHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCEEETC
T ss_pred hhhhhHHHHHH-HHHHHhhcCCCeeeeccccccCCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecccCCC
Confidence 1111111111 12222233456999999976432211 1 122 234555555555443 3799999999875
Q ss_pred CC
Q 046395 442 SP 443 (535)
Q Consensus 442 ~~ 443 (535)
.+
T Consensus 362 ~~ 363 (410)
T d1uuqa_ 362 RT 363 (410)
T ss_dssp CC
T ss_pred CC
Confidence 54
|
| >d2c0ha1 c.1.8.3 (A:18-367) endo-1,4-beta-mannosidase {Blue mussel (Mytilus edulis) [TaxId: 6550]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: endo-1,4-beta-mannosidase species: Blue mussel (Mytilus edulis) [TaxId: 6550]
Probab=99.88 E-value=5.5e-23 Score=205.93 Aligned_cols=236 Identities=15% Similarity=0.077 Sum_probs=152.2
Q ss_pred chHHHHHHHHHcCCCEEEeCCccccccCCCCC-----CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCC
Q 046395 181 ITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPP-----KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSG 255 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~-----~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg 255 (535)
.+++||+.||++|+|+|||++.++....|... ..++...++.+|++|++|+++||+||+|+|..++.+++....
T Consensus 43 ~~~~~l~~~~~~G~N~vRv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~a~~~gi~vi~d~~~~~~~~~~~~~~- 121 (350)
T d2c0ha1 43 TFESTLSDMQSHGGNSVRVWLHIEGESTPEFDNNGYVTGIDNTLISDMRAYLHAAQRHNILIFFTLWNGAVKQSTHYRL- 121 (350)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEEETTSSSSEECTTSCEEECCTTHHHHHHHHHHHHHHTTCEEEEEEEECSCCCTTHHHH-
T ss_pred HHHHHHHHHHHcCCCEEEECcccCccCCcccccCCCCCccChhhhHHHHHHHHHHHHCCCEEEEEeccccccCCCCccc-
Confidence 34899999999999999999987654443211 114556899999999999999999999999875543322110
Q ss_pred CCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC---------------------------CCChHHH
Q 046395 256 SRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP---------------------------DLKLDSL 307 (535)
Q Consensus 256 ~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~---------------------------~~~~~~~ 307 (535)
....|. +...+.+.++|+.|++||+++|+|++|+|.|||... ......+
T Consensus 122 ---~~~~~~~~~~~~~~~~~~~~~a~r~~~~psv~~~~l~NEp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (350)
T d2c0ha1 122 ---NGLMVDTRKLQSYIDHALKPMANALKNEKALGGWDIMNEPEGEIKPGESSSEPCFDTRHLSGSGAGWAGHLYSAQEI 198 (350)
T ss_dssp ---HHHHHCHHHHHHHHHHTHHHHHHHHTTCTTEEEEEEEECGGGGBCCSCCCSSGGGCCGGGTTSCTTTTCSCBCHHHH
T ss_pred ---CcccCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEEEecccccccCccccccccccccchhcccccccccccccHHHH
Confidence 001112 455778889999999999999999999999999631 1124578
Q ss_pred HHHHHHHHHHHHhcCCCcEEEEcCC---C-----C-CC---hhhhh--cccCCCCcEEEEEeecCcCCCcccCCChhhhH
Q 046395 308 KTYYKAGYDTVRKYSSSAYVILSNR---L-----G-GE---WSELL--SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNI 373 (535)
Q Consensus 308 ~~~~~~~~~aIR~~~p~~~ii~~~~---~-----g-~~---~~~~~--~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i 373 (535)
..++..++.+||+.+|.++|.++.. + . .. ..... .........+++.|.|..............
T Consensus 199 ~~~~~~~~~~i~~~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~y~~~~~~~~~~~~~~-- 276 (350)
T d2c0ha1 199 GRFVNWQAAAIKEVDPGAMVTVGSWNMKADTDAMGFHNLYSDHCLVKAGGKQSGTLSFYQVHTYDWQNHFGNESPFKH-- 276 (350)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEESCGGGBCSSTTCCBTTSHHHHHHHHCCTTCCCSSEEEECCCBTTBCCTTCTTSS--
T ss_pred HHHHHHHHHHHHHhCCCceEEecccccCcCcccccccccccccccchhhcccccccceeccccCCCCCcchhhhhHHH--
Confidence 9999999999999999998876421 0 0 00 01110 111234456899999976433211111100
Q ss_pred HHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 374 DYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 374 ~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
.. .....+.|++|||||...... ..... +++. .+.....|+++|+|...
T Consensus 277 -----~~------~~~~~~kPv~igEfg~~~~~~-~~~~~---~~~~---~~~~~~~G~~~W~~~d~ 325 (350)
T d2c0ha1 277 -----SF------SNFRLKKPMVIGEFNQEHGAG-MSSES---MFEW---AYTKGYSGAWTWSRTDV 325 (350)
T ss_dssp -----CG------GGGCCSSCEEEEECCGGGSTT-CCHHH---HHHH---HHHTTCSEEEESCSSSS
T ss_pred -----HH------HhccCCCcEEEEecCCCCCCC-ccHHH---HHHH---HHHhCCeEEEEEeeecC
Confidence 00 112234569999999764322 12222 2221 22234468899998664
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=4.8e-21 Score=165.76 Aligned_cols=111 Identities=23% Similarity=0.309 Sum_probs=95.2
Q ss_pred eeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecC-CeEEEEeeCCcEEEeecCCCeEEEeccCCCCCCc
Q 046395 19 QVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINE-TFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEP 97 (535)
Q Consensus 19 ~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e~ 97 (535)
||.||| .+|||||||+|| .|+|||+.+ +.||+|+|+...+ +.+.||..+|+||+++. ++.|+|+++++++||+
T Consensus 3 qv~l~~-~ngkyvsa~~G~--~v~An~~~~--~~~e~F~le~~~~~~~~~Lr~~~gkyl~~~~-~g~v~a~~~~~~~~e~ 76 (123)
T d1dfca3 3 QVVLQA-ANERNVSTRQGM--DLSANQDEE--TDQETFQLEIDRDTKKCAFRTHTGKYWTLTA-TGGVQSTASSKNASCY 76 (123)
T ss_dssp EEEEEC-TTSCEEEC---C--BCEEEECCC--SGGGCEEEEECTTTCCEEEEETTTEEEEECT-TSBEEEEESSCCGGGC
T ss_pred eEEEEe-cCCCEEEEcCCC--EEEeccccc--CCcceEEEEECCCCCEEEEEeCCCCEEEEcC-CCcEEEccccCCCceE
Confidence 899998 699999999976 499999999 9999999998665 57999999999999988 7789999999999999
Q ss_pred eEEEecCCCCceeEEEecCCceEEEecccEEecCCCCCCCc
Q 046395 98 FQITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKGPSTW 138 (535)
Q Consensus 98 f~~~~~~~~~~~v~I~~~nG~flq~~~~~~v~a~~~~~~~w 138 (535)
|+|+.++ +++.|++.||+||++.....+.+.....+.|
T Consensus 77 F~~~~~~---g~~alra~nG~yl~a~~~G~l~a~~~~~g~~ 114 (123)
T d1dfca3 77 FDIEWRD---RRITLRASNGKFVTSKKNGQLAASVETAGDS 114 (123)
T ss_dssp BEEEEET---TEEEEECTTSSBCEECSSSBEESCCSSCCSS
T ss_pred EEEEEeC---CeEEEEeCCCCEEEeCCCCEEEEccCCCCCc
Confidence 9999873 4799999999999998877788776544433
|
| >d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Bacillus licheniformis [TaxId: 1402]
Probab=99.83 E-value=1.9e-19 Score=186.11 Aligned_cols=236 Identities=17% Similarity=0.269 Sum_probs=153.2
Q ss_pred hHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDG 259 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~ 259 (535)
+++.|+.||++|+|+||||| |+..... .+.++.. ..++++++++++|+++||+||||||..+. |..++....
T Consensus 40 ~~d~~~~lk~~G~n~VRl~v-w~~~~~~-~~~~~~~g~~~l~~~~~~~~~a~~~Gl~v~ldlH~sd~----wadp~~q~~ 113 (387)
T d1ur4a_ 40 KQDIFKTLKEAGVNYVRVRI-WNDPYDA-NGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDF----WADPAKQKA 113 (387)
T ss_dssp BCCHHHHHHHTTCCEEEEEE-CSCCBCT-TCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSS----CCSSSCCCC
T ss_pred cccHHHHHHHcCCCEEEeec-ccCCccc-ccCcCCCccccHHHHHHHHHHHHHCCCEEEEEeCCCCC----CcCCCCCCC
Confidence 46789999999999999999 5432221 2222322 26999999999999999999999997543 333333333
Q ss_pred CCCCC----hHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC---CCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 260 FQEWS----DSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP---DLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 260 ~~~W~----~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~---~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
...|. .+..+...++.+.+.+++++++ .+.+|||.|||... ..+.+.+.+++++++++||+.+|+..|+++.
T Consensus 114 p~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eigNE~~~~~~~~~~~~~~~~ll~~~~~avr~~dp~~~vi~~~ 193 (387)
T d1ur4a_ 114 PKAWANLNFEDKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHF 193 (387)
T ss_dssp CGGGTTCCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred chhhhccchhHHHHHHHHHHHHHHHHHhhcCCCccEEEEecCCCcCccCcCCHHHHHHHHHHHHHHHHhcCCCceEEEec
Confidence 44554 3455566666666666665554 56779999999863 3467899999999999999999999888864
Q ss_pred CCCCCh---hhhhcc--cCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC
Q 046395 332 RLGGEW---SELLSF--ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA 406 (535)
Q Consensus 332 ~~g~~~---~~~~~~--~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~ 406 (535)
.-+.+. ..+.+. ....+..++.+|+|..+.. +... +.. .+..+.+..+++++|+|++..+..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~d~ig~s~Y~~w~~-----~~~~----~~~----~l~~l~~~~~k~v~v~E~~~~~t~ 260 (387)
T d1ur4a_ 194 TNPETSGRYAWIAETLHRHHVDYDVFASSYYPFWHG-----TLKN----LTS----VLTSVADTYGKKVMVAETSYTYTA 260 (387)
T ss_dssp CCTTSTTHHHHHHHHHHHTTCCCSEEEEEECTTTSC-----CHHH----HHH----HHHHHHHHHCCEEEEEEECCCSCS
T ss_pred cCccchHHHHHHHHHHHhcCCCcccccceeecccCc-----cHHH----HHH----HHHHHHHHhCCceEEEEecccccC
Confidence 222221 222221 1345778999999976532 1222 211 222233333567999999865421
Q ss_pred C------------------CCCHHHHHHHHHHHHHHHhh---CCcceEEEe
Q 046395 407 E------------------GASKRDYQRFAEAQLDVYGR---ATFGWAYWA 436 (535)
Q Consensus 407 ~------------------~~~~~~~~~~~~~ql~~~~~---~~~Gw~~W~ 436 (535)
. ..+.+....|++...+.... .++|++||.
T Consensus 261 ~~~d~~~~~~~~~~~~~~~p~s~~gQ~~~l~~l~~~~~~~~~~G~G~~YWe 311 (387)
T d1ur4a_ 261 EDGDGHGNTAPKNGQTLNNPVTVQGQANAVRDVIQAVSDVGEAGIGVFYWE 311 (387)
T ss_dssp CCSSSSCCSSSCTTSCCCSCSSHHHHHHHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred CCccccCccCCCccccccCCCCHHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 0 12344455566655555543 368999994
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=6.2e-19 Score=154.24 Aligned_cols=104 Identities=16% Similarity=0.133 Sum_probs=89.2
Q ss_pred ceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEec----CCeEEEEeeCCcEEEeecCCCeEEEeccCCC
Q 046395 18 TQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRIN----ETFYNFRLSNKQFIGLENQGNKLVAVSATEK 93 (535)
Q Consensus 18 ~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~ 93 (535)
.++-|+| .+|||||||.+|+ .|+|||+++ +.||+|.|+.+. ++++.||..+|+||+++. +|.|+|++++|+
T Consensus 5 ~~~gl~~-~~gkYltAe~~G~-~v~a~~~~~--~~~e~w~le~~~~~~~~~~v~Lrs~~Gkylsa~~-~g~v~a~~~~~~ 79 (133)
T d1dfca1 5 IQFGLIN-CGNKYLTAEAFGF-KVNASASSL--KKKQIWTLEQPPDEAGSAAVCLRSHLGRYLAADK-DGNVTCEREVPG 79 (133)
T ss_dssp CEECEEC-TTSCBCEECSSSS-CEECCCSSC--CTTTCEECC--------CCBCCBCTTSCEEEECT-TSCEEEEESSCC
T ss_pred cEEeEEE-cCCcEEEEECCCC-EEEeeCCCC--CCCcEEEEEEecCCCCCCEEEEEecCCCEEeecc-CcceEEcCCCCC
Confidence 4677888 5999999999885 599999999 999999999875 378999999999999998 788999999999
Q ss_pred CCCceEEEecCCCCceeEEEe-cCCceEEEecccEE
Q 046395 94 FPEPFQITRKNGEPHRVRFRA-SNGYFLQAKSEMQV 128 (535)
Q Consensus 94 ~~e~f~~~~~~~~~~~v~I~~-~nG~flq~~~~~~v 128 (535)
.||+|+++.++|. ++.+++ .||.||.++++.++
T Consensus 80 ~~E~F~~~~~~dG--~~~l~s~~nG~yl~~~~~~l~ 113 (133)
T d1dfca1 80 PDCRFLIVAHDDG--RWSLQSEAHRRYFGGTEDRLS 113 (133)
T ss_dssp GGGCEECCBCSSS--CBCCEETTTCCEEEEETTEEE
T ss_pred CCcEEEEEECCCC--EEEEEEcCCCcEEEecCCceE
Confidence 9999999998654 588998 68999999877643
|
| >d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Fungus (Aspergillus aculeatus) [TaxId: 5053]
Probab=99.73 E-value=1.7e-16 Score=160.09 Aligned_cols=231 Identities=16% Similarity=0.231 Sum_probs=154.1
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-++.||++|+|+|||+| | .+|.++. + .++.++++++.|+++||+|+||+|..+. |..++.......
T Consensus 30 ~d~~~~lk~~G~n~VRlrv-W---~~p~~g~-~---~~~~~~~~~~~a~~~Gm~vll~~hysd~----Wadp~~q~~P~a 97 (334)
T d1foba_ 30 QALETILADAGINSIRQRV-W---VNPSDGS-Y---DLDYNLELAKRVKAAGMSLYLDLHLSDT----WADPSDQTTPSG 97 (334)
T ss_dssp CCHHHHHHHHTCCEEEEEE-C---SCCTTCT-T---CHHHHHHHHHHHHHTTCEEEEEECCSSS----CCBTTBCBCCTT
T ss_pred ccHHHHHHHcCCCEEEeee-e---eCCCCCc-C---cHHHHHHHHHHHHHCCCEEEEEecCCCc----ccCCCcCCCccc
Confidence 4567889999999999998 4 4666553 4 7999999999999999999999996432 333333333445
Q ss_pred CC----hHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCCC--cEEE
Q 046395 263 WS----DSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP-------DLKLDSLKTYYKAGYDTVRKYSSS--AYVI 328 (535)
Q Consensus 263 W~----~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~--~~ii 328 (535)
|. ++..+.+.++++.++++|++.. .+..+++.|||... ......+.++++.++++||++++. ..|+
T Consensus 98 w~~~~~~~~~~~~~~~t~~v~~~~k~~~~~~~~vqIgNE~n~g~~w~~g~~~~~~~~a~ll~a~~~aVr~~~~~~~~~i~ 177 (334)
T d1foba_ 98 WSTTDLGTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYSNIGALLHSGAWGVKDSNLATTPKIM 177 (334)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHHHHHHHHHHHHHHHHTSCCSSCCEEE
T ss_pred ccccccccHHHHHHHHHHHHHHHHHhcCCCceEEEcccccCccccCCCCCCCCHHHHHHHHHHHHHHHHHhhccccccee
Confidence 64 5667888999999999998865 36679999998742 235578999999999999999864 3444
Q ss_pred EcCCCCCChh-------hhhccc--CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEec
Q 046395 329 LSNRLGGEWS-------ELLSFA--SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGE 399 (535)
Q Consensus 329 ~~~~~g~~~~-------~~~~~~--~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGE 399 (535)
++...+.+.. .+.... ...+-.++.+|+|+.+... ..++.+... +..+.+..+.+++|.|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~Dvig~syYp~w~~~-------~~l~~l~~~----l~~l~~~y~k~v~I~E 246 (334)
T d1foba_ 178 IHLDDGWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPFYSAS-------ATLASLKTS----LANLQSTYDKPVVVVE 246 (334)
T ss_dssp EEESCTTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSSSCTT-------CCHHHHHHH----HHHHHHHHCCCEEEEE
T ss_pred eecccCCChhhhHHHHHHHHhcCCCCCCCcCeEEEecCCCCCCc-------ccHHHHHHH----HHHHHHHhCCceEEEE
Confidence 4433333321 122111 1124579999999765321 112333222 3333333355699999
Q ss_pred cCCCcCCC-------------CCCHHHHHHHHHHHHHHHhh--CCcceEEEe
Q 046395 400 WSCEWEAE-------------GASKRDYQRFAEAQLDVYGR--ATFGWAYWA 436 (535)
Q Consensus 400 fg~~~~~~-------------~~~~~~~~~~~~~ql~~~~~--~~~Gw~~W~ 436 (535)
+|..+... ..+.+...+|+.+++..... .+.|.+||.
T Consensus 247 t~~~~t~~~~~~~~~~~~~~~p~s~~gQa~yl~~~~~~~~~~~~G~G~~YWe 298 (334)
T d1foba_ 247 TNWPVSCPNPAYAFPSDLSSIPFSVAGQQEFLEKLAAVVEATTDGLGVYYWE 298 (334)
T ss_dssp CCCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred ecccccCCcccccccccccCCCCCHHHHHHHHHHHHHHHhhcCCceEEEEeC
Confidence 98765321 13345556777776666643 468999995
|
| >d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-1,4-galactanase species: Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]
Probab=99.71 E-value=1.6e-16 Score=159.37 Aligned_cols=231 Identities=16% Similarity=0.192 Sum_probs=149.3
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-++.||++|+|+||||| | .+|..+. + .++.++++++.|+++||+|||++|..++ |..++.......
T Consensus 30 ~~~~~~lk~~G~n~VRi~v-W---~~p~~g~-~---~~~~~~~~v~~a~~~gl~vil~~h~~~~----wa~~~~~~~p~~ 97 (332)
T d1hjsa_ 30 QPLENILAANGVNTVRQRV-W---VNPADGN-Y---NLDYNIAIAKRAKAAGLGVYIDFHYSDT----WADPAHQTMPAG 97 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEE-C---SSCTTCT-T---SHHHHHHHHHHHHHTTCEEEEEECCSSS----CCBTTBCBCCTT
T ss_pred ccHHHHHHHcCCCEEEeee-e---ecCCCCc-c---CHHHHHHHHHHHHHCCCEEEEEecCCcc----ccCccccCCCcc
Confidence 6788899999999999998 5 4676554 4 7999999999999999999999998654 222222223334
Q ss_pred CC---hHHHHHHHHHHHHHHHHhCCCCc-EEEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhcCCC--cEEEE
Q 046395 263 WS---DSDIQETVAIIDFLASRYADHPS-LVAIELMNEPKAP-------DLKLDSLKTYYKAGYDTVRKYSSS--AYVIL 329 (535)
Q Consensus 263 W~---~~~~~~~~~~~~~la~ry~~~p~-V~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~~p~--~~ii~ 329 (535)
|. ....+.+.++++.++++|++... +..+++.|||... ......+.++++.++++||+.+++ ..|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~v~~~~k~~~~~~~~~~i~nE~n~g~~w~~~~~~~~~~~~~l~~~a~~av~~~~~~~~~~v~~ 177 (332)
T d1hjsa_ 98 WPSDIDNLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMI 177 (332)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEE
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhcCCchhHhhhccccCCcccCccCCcchHHHHHHHHHHHHHHHHhhccCCCcceee
Confidence 43 45567788999999999987654 4557888888641 234578899999999999997743 43444
Q ss_pred cCCCCCChh-------hhhccc--CCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEecc
Q 046395 330 SNRLGGEWS-------ELLSFA--SNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEW 400 (535)
Q Consensus 330 ~~~~g~~~~-------~~~~~~--~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEf 400 (535)
....+.+.. .+.... ...+-.++.+|+|..+.. ..+.....+. +..+.+..+.+++|.|+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~ig~~~Y~~~~~---~~~~~~~~~~--------~~~~~~~~g~~v~i~E~ 246 (332)
T d1hjsa_ 178 HLDNGWDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPFYSS---SATLSALKSS--------LDNMAKTWNKEIAVVET 246 (332)
T ss_dssp EESCTTCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSSSCT---TCCHHHHHHH--------HHHHHHHHCCEEEEEEC
T ss_pred cccCcCchhhhhhHHHHHHhcCcccCCccceEeeeecCCCCC---CCCHHHHHHH--------HHHHHHHhCCceEEEEe
Confidence 332222322 111111 122457899999976431 1122222221 12222223557999999
Q ss_pred CCCcCCC-------------CCCHHHHHHHHHHHHHHHhh--CCcceEEEe
Q 046395 401 SCEWEAE-------------GASKRDYQRFAEAQLDVYGR--ATFGWAYWA 436 (535)
Q Consensus 401 g~~~~~~-------------~~~~~~~~~~~~~ql~~~~~--~~~Gw~~W~ 436 (535)
|..+... ..+.+...+|++..+....+ .++|.+||.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~s~~~Qa~~~~~~~~~~~~~~~g~G~~yW~ 297 (332)
T d1hjsa_ 247 NWPISCPNPRYSFPSDVKNIPFSPEGQTTFITNVANIVSSVSRGVGLFYWE 297 (332)
T ss_dssp CCCSBCSSCSSCCCGGGTTSCSSHHHHHHHHHHHHHHHHTSTTEEEEEEEC
T ss_pred ccccccccccccccccccCCCCCHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 8653211 12445556777776666655 457899994
|
| >d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermus thermophilus [TaxId: 274]
Probab=99.71 E-value=4.9e-17 Score=169.80 Aligned_cols=183 Identities=20% Similarity=0.259 Sum_probs=133.0
Q ss_pred EEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+|. .+.||+|+..... .. ....+...+.|. +||+.| ++|+++|+++|+|++|++|.|
T Consensus 9 ~atsa~QvEG~~~~~g~~~s~wd~~~~~-~~---~~~~~~~~~~a~----d~y~~y--~eDi~ll~~lG~~~yRfsi~W- 77 (426)
T d1ug6a_ 9 VATSAYQIEGATQEDGRGPSIWDAFAQR-PG---AIRDGSTGEPAC----DHYRRY--EEDIALMQSLGVRAYRFSVAW- 77 (426)
T ss_dssp EECCHHHHCCCTTSTTCCCBHHHHHTTS-TT---SSTTSCCSSSTT----CHHHHH--HHHHHHHHHHTCCEEEEECCH-
T ss_pred EEchHHHhcCCcCCCCCCcchhhhhhcC-CC---cccCCCCCCccc----chhhhh--HHHHHHHHHcCCCEEEccCCH-
Confidence 5578889999983 4788999764322 10 112233344566 888888 999999999999999999987
Q ss_pred cccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHhC
Q 046395 205 IAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRYA 283 (535)
Q Consensus 205 ~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry~ 283 (535)
.++.|+..+.+++..+++++++|+.|.++||++||+|||. +.+........|. ++..+.|+++.+.++++|+
T Consensus 78 sRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hf-------d~P~~l~~~gGw~~~~~~~~F~~Ya~~v~~~fg 150 (426)
T d1ug6a_ 78 PRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLYHW-------DLPLALEERGGWRSRETAFAFAEYAEAVARALA 150 (426)
T ss_dssp HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSHHHHHHHHHHHHHHHHHHT
T ss_pred HHcccCCCCCcChHHHHHHHHHHHHHHHcCCeEEEEeccc-------ccchhhhccCccCCHHHHHHHHHHHHHHHHHhC
Confidence 7888874445899999999999999999999999999984 2221112234565 7899999999999999999
Q ss_pred CCCcEEEEEeecCCCC------------CCC-Ch-------HHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 284 DHPSLVAIELMNEPKA------------PDL-KL-------DSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 284 ~~p~V~~~el~NEP~~------------~~~-~~-------~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
+ .|..|-++|||.. ++. +. ..+......+++++|+..+....++
T Consensus 151 d--~V~~w~TiNEP~~~~~~gy~~G~~ppg~~~~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~~~~ 214 (426)
T d1ug6a_ 151 D--RVPFFATLNEPWCSAFLGHWTGEHAPGLRNLEAALRAAHHLLLGHGLAVEALRAAGARRVGIV 214 (426)
T ss_dssp T--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred c--ccceEEEecCCeeEeeeccccCccccCCcchHHHHHHHHHHHHHHHHHHHHHHHhCCCceeEE
Confidence 9 6677999999952 111 11 1122233456777888777655433
|
| >d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus polymyxa [TaxId: 1406]
Probab=99.69 E-value=2.6e-17 Score=172.99 Aligned_cols=184 Identities=18% Similarity=0.271 Sum_probs=135.1
Q ss_pred cEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+|. .+.+|+|+..... .+ ...++-.++.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 12 G~atsa~Q~EG~~~~~g~~~s~wd~~~~~-~~---~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W 81 (447)
T d1e4ia_ 12 GTATAAYQIEGAYQEDGRGLSIWDTFAHT-PG---KVFNGDNGNVAC----DSYHRY--EEDIRLMKELGIRTYRFSVSW 81 (447)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---TSGGGCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eeechHHHhCCCcCCCCCccchhhhhhcC-CC---cccCCCCCCccc----chhHhh--HHHHHHHHHhCCCEEEccCCH
Confidence 35678899999993 4778988754321 11 122333345566 888887 999999999999999999997
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|.+.+.+++..+++++++|+.|.++||+++|+|||. +.+........|. ++..+.|.++.+.++++|
T Consensus 82 -sRI~P~g~g~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~-------dlP~~l~~~gGw~n~~~~~~F~~Ya~~v~~~f 153 (447)
T d1e4ia_ 82 -PRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLYHW-------DLPQALQDAGGWGNRRTIQAFVQFAETMFREF 153 (447)
T ss_dssp -HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTTTSSTHHHHHHHHHHHHHHHHT
T ss_pred -HHcccCCCCCcCHHHHHHHHHHHHHHHHhCCeEEEEeecc-------ccchhhhcCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7888885456899999999999999999999999999984 2221111233565 789999999999999999
Q ss_pred CCCCcEEEEEeecCCCC------------CCC-Ch-------HHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 283 ADHPSLVAIELMNEPKA------------PDL-KL-------DSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~------------~~~-~~-------~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
+| .|..|-++|||.. ++. +. ..+......+++++|+..+...|-+
T Consensus 154 gd--rV~~W~TiNEP~~~~~~gy~~G~~~Pg~~~~~~~~~~~~~~~~AHa~a~~~~~~~~~~~~vGi 218 (447)
T d1e4ia_ 154 HG--KIQHWLTFNEPWCIAFLSNMLGVHAPGLTNLQTAIDVGHHLLVAHGLSVRRFRELGTSGQIGI 218 (447)
T ss_dssp BT--TBCEEEEEECHHHHHHHHHTSCCSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEE
T ss_pred CC--ccceEEecCCCceeeecccccccccCcccchhhHHHhHHHHHHHHHHHHHHHHHhhhcceeee
Confidence 99 7889999999964 111 11 1222233456678888887765544
|
| >d1qoxa_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]
Probab=99.69 E-value=6e-17 Score=170.27 Aligned_cols=184 Identities=15% Similarity=0.196 Sum_probs=136.2
Q ss_pred cEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-+|++|.||+|. .+.||+|+..... . -...++-.++.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 12 G~atsa~Q~EG~~~~~g~g~s~wd~~~~~-~---~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W 81 (449)
T d1qoxa_ 12 GVATAAYQIEGAYNEDGRGMSIWDTFAHT-P---GKVKNGDNGNVAC----DSYHRV--EEDVQLLKDLGVKVYRFSISW 81 (449)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHS-T---TTSGGGCCTTTTT----CTTSCH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eeechHHHhCcCcCCCCCccchhhhhhcC-C---CcccCCCCCCccc----chhhhh--HHHHHHHHHcCCCEEEccCCH
Confidence 35678899999994 4678998754321 1 1112333445666 899988 999999999999999999997
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|++.+.+++..+++++++|+.|.++||.++|+|||. +.+........|. ++..+.|.++.+.++++|
T Consensus 82 -sRi~P~g~g~~n~~~~~~Y~~~i~~l~~~gi~P~vTL~H~-------d~P~~l~~~gGw~~~~~~~~F~~Ya~~v~~~f 153 (449)
T d1qoxa_ 82 -PRVLPQGTGEVNRAGLDYYHRLVDELLANGIEPFCTLYHW-------DLPQALQDQGGWGSRITIDAFAEYAELMFKEL 153 (449)
T ss_dssp -HHHSTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSTHHHHHHHHHHHHHHHHH
T ss_pred -HHcccCCCCCcCHHHHHHHHHHHHHHHhcCCeEEEEEecc-------cccchhccccCcCCHHHHHHHHHHHHHHHHHh
Confidence 7888885445899999999999999999999999999984 2221112234565 789999999999999999
Q ss_pred CCCCcEEEEEeecCCCC------------CCC-Ch-------HHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 283 ADHPSLVAIELMNEPKA------------PDL-KL-------DSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~------------~~~-~~-------~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
+| .|..|-++|||.. +.. +. ..+......+++++|+..++..|.+
T Consensus 154 gd--~V~~W~T~NEP~~~~~~gy~~g~~~Pg~~~~~~~~~~~~~~~~Aha~a~~~~~~~~~~~~vgi 218 (449)
T d1qoxa_ 154 GG--KIKQWITFNEPWCMAFLSNYLGVHAPGNKDLQLAIDVSHHLLVAHGRAVTLFRELGISGEIGI 218 (449)
T ss_dssp TT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred cc--cccceEEecCcceeccccccccccCcccccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeee
Confidence 99 7888999999964 111 11 1222334455678888887765544
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.66 E-value=4.5e-16 Score=132.76 Aligned_cols=109 Identities=10% Similarity=0.174 Sum_probs=93.5
Q ss_pred eeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCCce
Q 046395 19 QVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEPF 98 (535)
Q Consensus 19 ~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e~f 98 (535)
.+.||| .+||||.||.+ .+.++|..+ +.||.|.|... ++++.||.++|+||++++ ++.|+|++++|+.||+|
T Consensus 3 ~~~lrs-~~gkyL~a~~~---~v~~~~~~~--~~~~~F~ve~~-~g~iaLks~~GkYlsa~~-~g~l~~~~~~~~~~E~F 74 (118)
T d1hcda_ 3 NRAFKS-HHGHFLSAEGE---AVKTHHGHH--DHHTHFHVENH-GGKVALKTHCGKYLSIGD-HKQVYLSHHLHGDHSLF 74 (118)
T ss_dssp CSEEES-STTCEEEEETT---EEEEECSCS--SCCCCCEEEEE-TTEEEEESSSSCEEEEEE-TTEEEEECCCSSSSSSB
T ss_pred cEEeEc-CCCcEEeecCC---ceEeeCCCC--CCCceEEEEcC-CCEEEEEeCCCCEEEecC-CCcEEEeccCCCCceEE
Confidence 578997 89999999955 488999999 99999999985 689999999999999998 88899999999999999
Q ss_pred EEEecCCCCceeEEEecCCceEEEecccEE--ecCCCCCCCc
Q 046395 99 QITRKNGEPHRVRFRASNGYFLQAKSEMQV--TADYKGPSTW 138 (535)
Q Consensus 99 ~~~~~~~~~~~v~I~~~nG~flq~~~~~~v--~a~~~~~~~w 138 (535)
+|++++ +++.|++.||+||+++....+ +++....++|
T Consensus 75 ~ie~~~---g~valrs~nGkylsa~~~g~v~~n~~~~~~~~W 113 (118)
T d1hcda_ 75 HLEHHG---GKVSIKGHHHHYISADHHGHVSTKEHHDHDTTF 113 (118)
T ss_dssp EEEEET---TEEEEECSTTCEEEECGGGCEEEESSCSSTTCB
T ss_pred EEEECC---CEEEEEeCCCCEEEEcCCCceeeEcCCCCCCCc
Confidence 999863 579999999999999765544 4455555556
|
| >d1qvba_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Thermosphaera aggregans [TaxId: 54254]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Thermosphaera aggregans [TaxId: 54254]
Probab=99.65 E-value=3e-16 Score=165.91 Aligned_cols=156 Identities=17% Similarity=0.254 Sum_probs=113.7
Q ss_pred EEecCCCCCCCc--ccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTW--EENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w--~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+| +.+.+|.|+..............++-.++.+. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 11 ~Atsa~QiEG~~~~~g~~~s~wd~~~~~~~~~~~~~~~gd~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W- 83 (481)
T d1qvba_ 11 YSSSPFQFEAGIPGSEDPNSDWWVWVHDPENTAAGLVSGDFPENGP----GYWNLN--QNDHDLAEKLGVNTIRVGVEW- 83 (481)
T ss_dssp EECCHHHHSCCSTTCCCTTBHHHHHHHCHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEECCH-
T ss_pred EechHHHhcCCcCCCCCCCcceeeeeccCCcccCCCcCCCCccccc----chhhcc--HHHHHHHHHcCCCEEEccCcH-
Confidence 567889999988 34677887643211000000011111233344 688877 999999999999999999997
Q ss_pred cccCCCCCC-----------------------------CCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCC
Q 046395 205 IAYDPKPPK-----------------------------PFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSG 255 (535)
Q Consensus 205 ~~~~p~~~~-----------------------------~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg 255 (535)
.++.|.+.. .++++.+++++++|+.|.++||.++|+|||. +.+.
T Consensus 84 sRi~P~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~gv~~Y~~~i~~l~~~GI~P~VTL~H~-------dlP~ 156 (481)
T d1qvba_ 84 SRIFPKPTFNVKVPVERDENGSIVHVDVDDKAVERLDELANKEAVNHYVEMYKDWVERGRKLILNLYHW-------PLPL 156 (481)
T ss_dssp HHHCSSCCTTSCCCEEECTTSCEEEECCCHHHHHHHHHHSCHHHHHHHHHHHHHHHTTTCEEEEESCCS-------CCBT
T ss_pred HhcCcCCCCcccccccccccccccccccccchhhhccccCCHHHHHHHHHHHHHHHHhCCeeEEEEecC-------CCcH
Confidence 778876431 1367789999999999999999999999984 3322
Q ss_pred CCC------------CCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 256 SRD------------GFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 256 ~~~------------~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
... ....|. ++..+.|.++.+.++++|+| .|..|-++|||.
T Consensus 157 ~L~d~~~~~~~g~~~~~GGW~n~~~v~~F~~YA~~v~~~fgd--rVk~WiTiNEP~ 210 (481)
T d1qvba_ 157 WLHNPIMVRRMGPDRAPSGWLNEESVVEFAKYAAYIAWKMGE--LPVMWSTMNEPN 210 (481)
T ss_dssp TTBCHHHHHHHCGGGSCBGGGSTHHHHHHHHHHHHHHHHHTT--SCSEEEEEECHH
T ss_pred HHhhhhhcccccccccCCCccCHHHHHHHHHHHHHHHHHhcc--hhheeEecCCCc
Confidence 221 134676 78999999999999999999 677899999995
|
| >d1uwsa_ c.1.8.4 (A:) beta-Glycosidase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: beta-Glycosidase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.63 E-value=1.5e-16 Score=168.57 Aligned_cols=156 Identities=17% Similarity=0.261 Sum_probs=114.0
Q ss_pred EEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCccc
Q 046395 127 QVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGWW 204 (535)
Q Consensus 127 ~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~w 204 (535)
.-||++|.||+|. .+.+|.|+........-.-...++--++.+. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 12 ~Atsa~QiEG~~~~~~~~~s~wd~~~~~~~~~~~~~~~~d~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSI~W- 84 (489)
T d1uwsa_ 12 WSQAGFQSEMGTPGSEDPNTDWYKWVHDPENMAAGLVSGDLPENGP----GYWGNY--KTFHDNAQKMGLKIARLNVEW- 84 (489)
T ss_dssp EECCHHHHSCSSTTCCCCCBHHHHHHHCHHHHHHTSSCSCCGGGSC----CHHHHH--HHHHHHHHHTTCCEEEEECCH-
T ss_pred EEchHHHhccCCCCCCCCCcchhhhhccCCcccCCCCCCCccccch----hHHHhH--HHHHHHHHHcCCCEEEecccH-
Confidence 5678899998883 3667777643211000000000110122334 688877 999999999999999999997
Q ss_pred cccCCCCC---------------------------CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCC
Q 046395 205 IAYDPKPP---------------------------KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSR 257 (535)
Q Consensus 205 ~~~~p~~~---------------------------~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~ 257 (535)
.++.|++. ++++++.+++++++|+.|.++||.++|+|||. +.+...
T Consensus 85 sRI~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~n~~gl~~Y~~~id~l~~~GIeP~VTL~H~-------dlP~~L 157 (489)
T d1uwsa_ 85 SRIFPNPLPRPQNFDESKQDVTEVEINENELKRLDEYANKDALNHYREIFKDLKSRGLYFILNMYHW-------PLPLWL 157 (489)
T ss_dssp HHHCCSCCCCC--CCTTCSCCCCCCCCHHHHHHHHTTSCHHHHHHHHHHHHHHHHTTCEEEEESCSS-------CCBTTT
T ss_pred HhcCcCCCccccccccccccccccccccccccccccCCCHHHHHHHHHHHHHHHHcCCccEEEEcCC-------CCcHHH
Confidence 78888641 34788899999999999999999999999984 222211
Q ss_pred -----------CCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 258 -----------DGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 258 -----------~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
.....|. ++..+.|+++.+.++++|++ .|-.|-++|||.
T Consensus 158 ~d~~~~~~~~f~~~GGW~n~~~v~~F~~YA~~v~~~fgd--rVk~WiTiNEP~ 208 (489)
T d1uwsa_ 158 HDPIRVRRGDFTGPSGWLSTRTVYEFARFSAYIAWKFDD--LVDEYSTMNEPN 208 (489)
T ss_dssp BCHHHHHTTCCSSCBGGGSHHHHHHHHHHHHHHHHHHTT--TCSEEEEEECHH
T ss_pred HhhhhccccccccCCCcCCHHHHHHHHHHHHHHHHHhcC--cceEEEeeCCCc
Confidence 1245676 89999999999999999999 788899999995
|
| >d1gnxa_ c.1.8.4 (A:) Beta-glucosidase A {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Streptomyces sp. [TaxId: 1931]
Probab=99.61 E-value=7.9e-17 Score=170.01 Aligned_cols=153 Identities=20% Similarity=0.284 Sum_probs=120.9
Q ss_pred cEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+|. ++.||+|+..... . -...++-..+.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 11 G~atsa~Q~EG~~~~~gk~~s~wd~~~~~-~---~~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSi~W 80 (464)
T d1gnxa_ 11 GSATASYQIEGAAAEDGRTPSIWDTYART-P---GRVRNGDTGDVAT----DHYHRW--REDVALMAELGLGAYRFSLAW 80 (464)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHTS-T---TSSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCSEEEEECCH
T ss_pred eeechHHHhccCcCCCCCcccHhhhhhcC-C---CcccCCCCCCccc----chhhhh--HHHHHHHHHcCCCEEEccCCH
Confidence 35678999999994 4678999754321 1 1122333445666 899888 999999999999999999997
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|+..+++++..+++++++|+.|.++||.+||+|||. +++........|. ++..+.|+++.+.++++|
T Consensus 81 -sRI~P~g~g~~n~~gl~~Y~~~i~~l~~~GI~P~VTL~Hf-------dlP~~l~~~gGW~n~~~v~~F~~YA~~v~~~f 152 (464)
T d1gnxa_ 81 -PRIQPTGRGPALQKGLDFYRRLADELLAKGIQPVATLYHW-------DLPQELENAGGWPERATAERFAEYAAIAADAL 152 (464)
T ss_dssp -HHHSGGGSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTCTTSTHHHHHHHHHHHHHHHHH
T ss_pred -HHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEEecC-------ccHHHHhhhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 7888874345899999999999999999999999999984 2222122234566 789999999999999999
Q ss_pred CCCCcEEEEEeecCCC
Q 046395 283 ADHPSLVAIELMNEPK 298 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~ 298 (535)
++ .|-.|.++|||.
T Consensus 153 gd--~Vk~W~T~NEP~ 166 (464)
T d1gnxa_ 153 GD--RVKTWTTLNEPW 166 (464)
T ss_dssp TT--TCCEEEEEECHH
T ss_pred cc--ccceeEEccCch
Confidence 99 788899999995
|
| >d2j78a1 c.1.8.4 (A:3-445) Beta-glucosidase A {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Thermotoga maritima [TaxId: 2336]
Probab=99.60 E-value=1.5e-16 Score=167.02 Aligned_cols=182 Identities=16% Similarity=0.192 Sum_probs=133.8
Q ss_pred cEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+|. .+.||+|+..... .. ....+..++.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 11 G~atsa~Q~EG~~~~~g~~~s~wd~~~~~-~~---~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfsi~W 80 (443)
T d2j78a1 11 GVATASYQIEGSPLADGAGMSIWHTFSHT-PG---NVKNGDTGDVAC----DHYNRW--KEDIEIIEKLGVKAYRFSISW 80 (443)
T ss_dssp EEECCHHHHCCCTTGGGCCCBHHHHHHTS-TT---SSGGGCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eeechHHHhCcCcCCCCCCccHHHHhhcC-CC---cccCCCCCCccC----chhhhh--HHHHHHHHHcCCCEEEccCCH
Confidence 35678899999994 4678999754321 10 112233344566 888888 999999999999999999987
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|++.+.+++..+++++++|+.|.++||+++|+|||. +++........|. ++..+.|.++.+.++++|
T Consensus 81 -sRi~P~g~g~~n~~~~~~Y~~~i~~l~~~GI~P~VTL~Hf-------~~P~wl~~~gGw~~~~~v~~F~~Ya~~v~~~~ 152 (443)
T d2j78a1 81 -PRILPEGTGRVNQKGLDFYNRIIDTLLEKGITPFVTIYHW-------DLPFALQLKGGWANREIADWFAEYSRVLFENF 152 (443)
T ss_dssp -HHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHTTTGGGSTTHHHHHHHHHHHHHHHH
T ss_pred -HHceeCCCCCcCHHHHHHHHHHHHHHHHcCCeeeEeecCc-------cchhhhhhcCCccChHHHHHHHHHHHHHHHHh
Confidence 7888875445999999999999999999999999999984 2221111223455 789999999999999999
Q ss_pred CCCCcEEEEEeecCCCC------------CCC-Ch-------HHHHHHHHHHHHHHHhcCCCcEE
Q 046395 283 ADHPSLVAIELMNEPKA------------PDL-KL-------DSLKTYYKAGYDTVRKYSSSAYV 327 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~------------~~~-~~-------~~~~~~~~~~~~aIR~~~p~~~i 327 (535)
++ .|-.|-++|||.. +.. +. ..+......+++++|+..+...|
T Consensus 153 gd--~V~~w~TiNEP~~~~~~gy~~G~~pPg~~~~~~~~~~~~n~l~AHa~A~~~~~~~~~~~~v 215 (443)
T d2j78a1 153 GD--RVKNWITLNEPWVVAIVGHLYGVHAPGMRDIYVAFRAVHNLLRAHARAVKVFRETVKDGKI 215 (443)
T ss_dssp TT--TCCEEEEEECHHHHHHHHHTSCSSTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred Cc--cccceEeccCceeEeecccccCcccccccchHHHHHHHHHHHHHHHHHHHHhhhcccCCce
Confidence 99 7888999999964 111 11 12233455667888888776553
|
| >d1wcga1 c.1.8.4 (A:3-464) Thioglucosidase {Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Thioglucosidase species: Cabbage aphid (Brevicoryne brassicae) [TaxId: 69196]
Probab=99.58 E-value=2.5e-16 Score=166.10 Aligned_cols=155 Identities=17% Similarity=0.239 Sum_probs=119.2
Q ss_pred cEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+|. .+.||+|+......... ...+...+.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 10 G~atsa~Q~EG~~~~dg~~~s~wd~~~~~~~~~---~~~~~~~~~a~----d~y~ry--~eDi~l~~~lG~~~yRfSi~W 80 (462)
T d1wcga1 10 GTSTASYQIEGGWNEDGKGENIWDRLVHTSPEV---IKDGTNGDIAC----DSYHKY--KEDVAIIKDLNLKFYRFSISW 80 (462)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHHCGGG---STTSCCSSSTT----CHHHHH--HHHHHHHHHHTCSEEEEECCH
T ss_pred eEEchHHHhcCCcCCCCCcccHHHHhhhcCCCc---ccCCCCCCccc----chhhhh--HHHHHHHHHhCCCEEEeeCcH
Confidence 35678899999983 36789987543221111 11223344566 899888 999999999999999999997
Q ss_pred ccccCCCC-CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHH
Q 046395 204 WIAYDPKP-PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASR 281 (535)
Q Consensus 204 w~~~~p~~-~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~r 281 (535)
.++.|+. .+.+++..++.++++|+.|.++||+++|+|||. +++........|. ++..+.|.++.+.++++
T Consensus 81 -sRI~P~G~~g~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hf-------d~P~~l~~~GGW~~~~~v~~F~~Ya~~v~~~ 152 (462)
T d1wcga1 81 -ARIAPSGVMNSLEPKGIAYYNNLINELIKNDIIPLVTMYHW-------DLPQYLQDLGGWVNPIMSDYFKEYARVLFTY 152 (462)
T ss_dssp -HHHSTTSCTTSCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHTTGGGSTTHHHHHHHHHHHHHHH
T ss_pred -HHcccCCCCCCcCHHHHHHHHHHHHHHHhcCCeeEEEeccc-------cchhhhhhcCCcccHHHHHHHHHHHHHHHHh
Confidence 7888873 234899999999999999999999999999985 2221112234555 78999999999999999
Q ss_pred hCCCCcEEEEEeecCCCC
Q 046395 282 YADHPSLVAIELMNEPKA 299 (535)
Q Consensus 282 y~~~p~V~~~el~NEP~~ 299 (535)
|++ .|-.|-++|||..
T Consensus 153 fgd--~V~~W~T~NEP~~ 168 (462)
T d1wcga1 153 FGD--RVKWWITFNEPIA 168 (462)
T ss_dssp HTT--TCCEEEEEECHHH
T ss_pred ccc--cchheeeecCCce
Confidence 999 7888999999963
|
| >d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Glucuronidase, domain 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=1.7e-13 Score=135.02 Aligned_cols=179 Identities=17% Similarity=0.237 Sum_probs=117.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++||+.||++|+|+||+... | .. +.+++.|.++||.|+.+++..... ....
T Consensus 39 ~~d~~~~k~~G~N~iR~~~~------~--~~----------~~~~~~cD~~Gilv~~e~~~~~~~-----------~~~~ 89 (304)
T d1bhga3 39 VKDFNLLRWLGANAFRTSHY------P--YA----------EEVMQMCDRYGIVVIDECPGVGLA-----------LPQF 89 (304)
T ss_dssp HHHHHHHHHHTCCEEECTTS------C--CS----------STHHHHHSTTCCEEEECCSCCCTT-----------SSGG
T ss_pred HHHHHHHHHcCCCEEEecCC------C--Ch----------HHHHHHHHhcCCeeeecccccccc-----------cccc
Confidence 79999999999999999321 1 11 126889999999999998753110 0001
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCChhhhhc
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGEWSELLS 342 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~~~~~~~ 342 (535)
..+...+.+.+.++.+++|+++||+|++|++.|||.. .......+.+.+++.||++||+++|..+..+......
T Consensus 90 ~~~~~~~~~~~~~~~~i~~~rnhPsI~~w~~~NE~~~---~~~~~~~~~~~~~~~ik~~Dptrpv~~~~~~~~~~~~--- 163 (304)
T d1bhga3 90 FNNVSLHHHMQVMEEVVRRDKNHPAVVMWSVANEPAS---HLESAGYYLKMVIAHTKSLDPSRPVTFVSNSNYAADK--- 163 (304)
T ss_dssp GSHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEESCCT---TSHHHHHHHHHHHHHHHTTCCSSCEEEEBCCCTTTCS---
T ss_pred cchHHHHHHHHHHHHHHHHhcCCCcHHHhccCCCCCc---ccchhhhhhHHHHHHHHhhCCCCceeeeccccccccc---
Confidence 1257788999999999999999999999999999975 3455678899999999999999998776543211111
Q ss_pred ccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCc
Q 046395 343 FASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEW 404 (535)
Q Consensus 343 ~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~ 404 (535)
......+++.|.|..+...+. ........+.. ....+.+....|++++|+|...
T Consensus 164 --~~~~~d~~~~~~~~~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~p~~~~e~g~~~ 217 (304)
T d1bhga3 164 --GAPYVDVICLNSYYSWYHDYG--HLELIQLQLAT----QFENWYKKYQKPIIQSEYGAET 217 (304)
T ss_dssp --SGGGCSSEEEECCTTSSSSTT--CHHHHHHHHHH----HHHHHHHHSCSCEEEEECCCCC
T ss_pred --ccccccccccccccccccccc--chhhhhhhhhH----HHHHhhccCCCCeEEecchhhc
Confidence 112234566777754322111 11111111111 1222223334569999999753
|
| >d1pbga_ c.1.8.4 (A:) 6-phospho-beta-D-galactosidase, PGAL {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: 6-phospho-beta-D-galactosidase, PGAL species: Lactococcus lactis [TaxId: 1358]
Probab=99.53 E-value=8.9e-16 Score=162.00 Aligned_cols=149 Identities=16% Similarity=0.274 Sum_probs=116.8
Q ss_pred cEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCEEEeCCcc
Q 046395 126 MQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNAVRIPVGW 203 (535)
Q Consensus 126 ~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~VRipv~~ 203 (535)
..-||++|.||+|. .+.||+|+...... .....+.|. +||+.| ++|+++||++|+|+.|++|.|
T Consensus 12 G~atsa~QiEG~~~~~gkg~s~wd~~~~~~--------~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~yRfSisW 77 (468)
T d1pbga_ 12 GGATAAYQAEGATHTDGKGPVAWDKYLEDN--------YWYTAEPAS----DFYHKY--PVDLELAEEYGVNGIRISIAW 77 (468)
T ss_dssp EEECCHHHHCCCTTSTTCCCBHHHHHHHTT--------CSCCSSSTT----CHHHHH--HHHHHHHHHTTCCEEEEECCH
T ss_pred eeEChHHHhcCCcCCCCCccchhheeeccC--------CCCCCCccC----chhhhh--HHHHHHHHHhCCCEEEccCCH
Confidence 35678999999993 46789998643211 112234566 888888 999999999999999999997
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHh
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSDIQETVAIIDFLASRY 282 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~~~~~~~~~~~la~ry 282 (535)
.++.|.+.+++++..+++++++|+.|.++||.++|+|||. +.+........|. ++..+.|+++.+.++++|
T Consensus 78 -sRI~P~g~g~~n~~gl~~Y~~~id~l~~~GI~P~VTL~H~-------dlP~~l~~~GGw~~~~~v~~F~~Ya~~~~~~f 149 (468)
T d1pbga_ 78 -SRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLHHF-------DTPEALHSNGDFLNRENIEHFIDYAAFCFEEF 149 (468)
T ss_dssp -HHHSTTSSSSCCHHHHHHHHHHHHHHHHHTCEEEEEEESS-------CCBHHHHHTTGGGSTHHHHHHHHHHHHHHHHC
T ss_pred -HHcCcCCCCCcCHHHHHHHHHHHHHHHHhCCeeEEEEecc-------cchhhHhhcCccCCHHHHHHHHHHHHHHHHhc
Confidence 7888874446899999999999999999999999999984 2221111233565 789999999999999999
Q ss_pred CCCCcEEEEEeecCCCC
Q 046395 283 ADHPSLVAIELMNEPKA 299 (535)
Q Consensus 283 ~~~p~V~~~el~NEP~~ 299 (535)
++ |..|-++|||..
T Consensus 150 gd---vk~W~T~NEP~~ 163 (468)
T d1pbga_ 150 PE---VNYWTTFNEIGP 163 (468)
T ss_dssp TT---CCEEEEESCHHH
T ss_pred CC---ceEEEEecCccc
Confidence 75 346999999974
|
| >d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Beta-D-xylosidase, catalytic domain species: Thermoanaerobacterium saccharolyticum [TaxId: 28896]
Probab=99.53 E-value=1.5e-14 Score=144.69 Aligned_cols=262 Identities=11% Similarity=0.128 Sum_probs=147.8
Q ss_pred hhHhHHhhhCccchHHHHHHH-HHcCCCEEEeCCccccccCC----CCCC----CCccchHHHHHHHHHHHHHcCCEEEE
Q 046395 169 AAKLMRDHWKSYITEEDFKFM-SQNGLNAVRIPVGWWIAYDP----KPPK----PFVGGSLQALDNAFRWAQKYGMKVIV 239 (535)
Q Consensus 169 a~~~~~~hw~~~ite~D~~~i-k~~G~N~VRipv~~w~~~~p----~~~~----~~~~~~l~~ld~~i~~a~~~Gi~VIl 239 (535)
++..++..| .+++..+ +++|++.||++-.+.....+ ..+. .| .+..+|++|+.|.++||++++
T Consensus 14 ~~~~l~~d~-----~~~l~~~~~~lG~~~vR~~~~~~~~~~~~~~~~~~~~~~~~y---d~~~~D~~~~~~~~~g~~~~~ 85 (346)
T d1uhva2 14 LGLALQKEY-----IETLKYVKENIDFKYIRGHGLLCDDVGIYREDVVGDEVKPFY---NFTYIDRIFDSFLEIGIRPFV 85 (346)
T ss_dssp GGGGGBHHH-----HHHHHHHHTTSCCCEEECSCTTSTTTCCEEEEEETTEEEEEE---CCHHHHHHHHHHHHHTCEECE
T ss_pred cccccCHHH-----HHHHHHHHHhcCCCEEEccCcccccCccccccccCccCCccc---ChHhHHHHHHHHHHcCCCeEE
Confidence 444444555 4566655 67999999986432110000 0000 12 478999999999999999999
Q ss_pred ecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCC-----CCcEEEEEeecCCCCC----CCChHHHHHH
Q 046395 240 DLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYAD-----HPSLVAIELMNEPKAP----DLKLDSLKTY 310 (535)
Q Consensus 240 dlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~-----~p~V~~~el~NEP~~~----~~~~~~~~~~ 310 (535)
.|...|+..................+...+.+.++++.+++||++ .+.|..||+.|||... ..+.+.+.++
T Consensus 86 ~l~~~p~~~~~~~~~~~~~~~~~~~p~~~~~w~~~v~~~~~~y~~~~~~~~~~~~~~evwNEp~~~~~~~~~~~~~y~~~ 165 (346)
T d1uhva2 86 EIGFMPKKLASGTQTVFYWEGNVTPPKDYEKWSDLVKAVLHHFISRYGIEEVLKWPFEIWNEPNLKEFWKDADEKEYFKL 165 (346)
T ss_dssp EECCCCTTTBSSCCEETTTTEECSCBSCHHHHHHHHHHHHHHHHHHHCHHHHTTCCEEESSCTTSTTTSGGGCHHHHHHH
T ss_pred EEeccCccccCCCCCcccccccCCChhhHHHHHHHHHHHHHHHHhhcCcccccccccccccCcccccCCCCCCHHHHHHH
Confidence 998766532211110000000011156678889999999999875 3457789999999854 2356789999
Q ss_pred HHHHHHHHHhcCCCcEEEEcCCCC-CC--hhhhhccc--CCCCcEEEEEeecCcCCCcccC-------CChhhhHHHHHH
Q 046395 311 YKAGYDTVRKYSSSAYVILSNRLG-GE--WSELLSFA--SNLSRVVIDVHFYNLFWDNFNK-------MSVQQNIDYIYR 378 (535)
Q Consensus 311 ~~~~~~aIR~~~p~~~ii~~~~~g-~~--~~~~~~~~--~~~~n~v~d~H~Y~~~~~~~~~-------~~~~~~i~~i~~ 378 (535)
++.++++||+.+|+..|+..+..+ .. ...++... ......++++|.|......+.. ...+.....+..
T Consensus 166 ~~~~~~aik~~~P~~~v~~~~~~~~~~~~~~~~l~~~~~~~~~~D~i~~H~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (346)
T d1uhva2 166 YKVTAKAIKEVNENLKVGGPAICGGADYWIEDFLNFCYEENVPVDFVSRHAYTSKQGEYTPHLIYQEIMPSEYMLNEFKT 245 (346)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEECTTCTHHHHHHHHHHHHHTCCCSEEEEEEECBCCCCCCSSCCCCCBCCHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCceEeeccccCCccccHHHHHHHHHhcCCcccceeeecCCCCCCcCCccchhhhhhhhhhHHHHHHH
Confidence 999999999999999876644222 11 12222211 2345668999999753322111 111111222211
Q ss_pred hhhHHHHHHhhcCCCcEEEeccCCCcCCCCC--CHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 379 QRSSDLRNVTTSDGPLSFVGEWSCEWEAEGA--SKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 379 ~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~--~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
....+... ...+.|++++|||........ .......|+...+........+..+|++...
T Consensus 246 -~~~~~~~~-~~~~~pi~~tE~g~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~d~ 307 (346)
T d1uhva2 246 -VREIIKNS-HFPNLPFHITEYNTSYSPQNPVHDTPFNAAYIARILSEGGDYVDSFSYWTFSDV 307 (346)
T ss_dssp -HHHHHHTS-SCTTCCEEEEEEESCSCTTCGGGGSHHHHHHHHHHHHHGGGTCSEEEESCSBSC
T ss_pred -HHHHHHhc-CCCCccceeccccCCCCCCCCcccHHHHHHHHHHHHHHhcccccEEEEEEeecc
Confidence 11111111 112346999999976432211 1112223443333333334457778887653
|
| >d1v02a_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Sorghum bicolor [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Sorghum bicolor [TaxId: 4558]
Probab=99.50 E-value=1.9e-15 Score=160.06 Aligned_cols=158 Identities=17% Similarity=0.308 Sum_probs=120.6
Q ss_pred ceEEEecccEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-||++|.||+|. .+.||+|+........ ...+....+.|. +||+.| ++|+++||++|+|
T Consensus 16 ~Fl----wG~Atsa~Q~EG~~~~~gkg~s~wd~~~~~~~~---~~~~~~~~~~a~----d~y~ry--~eDi~l~~~lG~~ 82 (484)
T d1v02a_ 16 SFL----FGAATSAYQIEGAWNEDGKGPSTWDHFCHNFPE---WIVDRSNGDVAA----DSYHMY--AEDVRLLKEMGMD 82 (484)
T ss_dssp TCE----EEEECCHHHHCCCTTSTTCCCBHHHHHHHHCGG---GSTTSCCSSSTT----CHHHHH--HHHHHHHHHTTCS
T ss_pred CCe----EeEEchHHHhCcCcCCCCCCccHHHHhhccCCC---cccCCCCCCccc----chhhhh--HHHHHHHHHhCCC
Confidence 466 346678899999994 4788999754321111 112223345566 889888 9999999999999
Q ss_pred EEEeCCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCC-CCCCCCC-hHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKP--PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSR-DGFQEWS-DSDIQET 271 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~--~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~-~~~~~W~-~~~~~~~ 271 (535)
+.|++|.| .++.|+. .+++++..+++++++|+.|.++||.+||+|||. +++... +....|. ++..+.|
T Consensus 83 ~yRfSisW-sRI~P~g~~~g~~n~~gl~~Y~~~id~l~~~GI~P~vTL~Hf-------d~P~~l~~~~Ggw~n~~~~~~F 154 (484)
T d1v02a_ 83 AYRFSISW-PRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITIFHW-------DTPQALVDAYGGFLDERIIKDY 154 (484)
T ss_dssp EEEEECCH-HHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHH
T ss_pred EEEccCCH-HHcCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEecCC-------cccceeeeecCcccCHHHHHHH
Confidence 99999997 7888873 245899999999999999999999999999984 222111 0123454 7899999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 272 VAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 272 ~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
.++.+.++++|++ .|-.|-++|||.
T Consensus 155 ~~Ya~~v~~~fgd--~V~~W~T~NEP~ 179 (484)
T d1v02a_ 155 TDFAKVCFEKFGK--TVKNWLTFNEPE 179 (484)
T ss_dssp HHHHHHHHHHHTT--TCCEEEEEECHH
T ss_pred HHhhHHHHHHhcc--hhhceEEecCcc
Confidence 9999999999999 788899999995
|
| >d1cbga_ c.1.8.4 (A:) Plant beta-glucosidase (myrosinase) {Creeping white clover (Trifolium repens) [TaxId: 3899]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: Creeping white clover (Trifolium repens) [TaxId: 3899]
Probab=99.49 E-value=2.1e-15 Score=160.07 Aligned_cols=158 Identities=16% Similarity=0.230 Sum_probs=120.3
Q ss_pred ceEEEecccEEecCCCCCCCcc--cCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCC
Q 046395 118 YFLQAKSEMQVTADYKGPSTWE--ENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLN 195 (535)
Q Consensus 118 ~flq~~~~~~v~a~~~~~~~w~--~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N 195 (535)
.|| -..-||++|.||+|. .+.||+|+......+. ........+.|. +||+.| ++|+++||++|+|
T Consensus 22 ~F~----wG~Atsa~Q~EG~~~~~gkg~s~wd~~~~~~~~---~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~ 88 (490)
T d1cbga_ 22 GFV----FGTASSAFQYEGAAFEDGKGPSIWDTFTHKYPE---KIKDRTNGDVAI----DEYHRY--KEDIGIMKDMNLD 88 (490)
T ss_dssp TCE----EEEECCHHHHCCCSSSTTCCCBHHHHHHHHCGG---GSTTCCCSSSTT----CHHHHH--HHHHHHHHHTTCC
T ss_pred CCe----EeeEChHHHhcCCcCCCCCccchhhhhhccCCc---ccCCCCCCCccc----chhhhh--HHHHHHHHHcCCC
Confidence 566 346788999999993 4788999764322111 111223344566 899888 9999999999999
Q ss_pred EEEeCCccccccCCCC--CCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHHHH
Q 046395 196 AVRIPVGWWIAYDPKP--PKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQET 271 (535)
Q Consensus 196 ~VRipv~~w~~~~p~~--~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~~~ 271 (535)
+.|++|.| .++.|+. .+++++.++++++++|+.|.++||.++|+|||. +++.... ....|. ++..+.|
T Consensus 89 ~yRfSi~W-sRI~P~g~~~g~~n~~gl~~Y~~~i~~l~~~GIeP~vTL~Hf-------dlP~~l~~~~Ggw~n~~~~~~F 160 (490)
T d1cbga_ 89 AYRFSISW-PRVLPKGKLSGGVNREGINYYNNLINEVLANGMQPYVTLFHW-------DVPQALEDEYRGFLGRNIVDDF 160 (490)
T ss_dssp EEEEECCH-HHHSTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTTHHHHH
T ss_pred EEEccCCH-HHcCCCCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEEeecC-------CChHHHhhcccccCCHHHHHHH
Confidence 99999997 7888873 235899999999999999999999999999985 2211110 112343 6899999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 272 VAIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 272 ~~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
+++.+.++++|++ .|-.|-++|||.
T Consensus 161 ~~Ya~~v~~~fgd--~V~~W~T~NEP~ 185 (490)
T d1cbga_ 161 RDYAELCFKEFGD--RVKHWITLNEPW 185 (490)
T ss_dssp HHHHHHHHHHHTT--TCCEEEEEECHH
T ss_pred HHHHHHHHHHhcC--ccceEEEccCCc
Confidence 9999999999999 788899999995
|
| >d1e4mm_ c.1.8.4 (M:) Plant beta-glucosidase (myrosinase) {White mustard (Sinapis alba) [TaxId: 3728]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Plant beta-glucosidase (myrosinase) species: White mustard (Sinapis alba) [TaxId: 3728]
Probab=99.46 E-value=4e-15 Score=158.10 Aligned_cols=159 Identities=11% Similarity=0.137 Sum_probs=119.7
Q ss_pred CceEEEecccEEecCCCCCCCcccCCcccceecccccccccchhhhccChhhhhHhHHhhhCccchHHHHHHHHHcCCCE
Q 046395 117 GYFLQAKSEMQVTADYKGPSTWEENDPSVFNMTIVSTMHGEYQITNGYGPDKAAKLMRDHWKSYITEEDFKFMSQNGLNA 196 (535)
Q Consensus 117 G~flq~~~~~~v~a~~~~~~~w~~~~ps~f~~~~~~~~~~e~~~~~~~G~~~a~~~~~~hw~~~ite~D~~~ik~~G~N~ 196 (535)
-.|| -..-+|++|.||+| .+.||+|+......... ......-.+.|. +||+.| ++|+++||++|+|+
T Consensus 25 ~~Fl----wG~atsa~Q~EG~~-gkg~s~wd~~~~~~~~~--~~~~~~~~~~a~----d~y~~y--~eDi~l~~~lG~~~ 91 (499)
T d1e4mm_ 25 SDFI----FGVASSAYQIEGTI-GRGLNIWDGFTHRYPNK--SGPDHGNGDTTC----DSFSYW--QKDIDVLDELNATG 91 (499)
T ss_dssp TTCE----EEEECCHHHHSCST-TSCCBHHHHHHHHSHHH--HCTTCCCSSSTT----CHHHHH--HHHHHHHHHHTCSE
T ss_pred CCCe----EeeechHHHhCCCC-CCCccHHhHHhhhcCCc--cCCCCCCCCccc----chHHHH--HHHHHHHHHhCCCE
Confidence 3576 34678899999998 67789887532110000 000111123455 899888 99999999999999
Q ss_pred EEeCCccccccCCCCC--CCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCC-CCCCCC-hHHHHHHH
Q 046395 197 VRIPVGWWIAYDPKPP--KPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRD-GFQEWS-DSDIQETV 272 (535)
Q Consensus 197 VRipv~~w~~~~p~~~--~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~-~~~~W~-~~~~~~~~ 272 (535)
.|++|.| .++.|... +++++..+++++++|+.|.++||.++|+|||. +++.... ....|. ++..+.|+
T Consensus 92 yRfSI~W-sRI~P~g~~~~~~n~~gl~~Y~~~i~~l~~~GI~P~vTL~Hf-------dlP~~l~~~~GGW~~~~~~~~F~ 163 (499)
T d1e4mm_ 92 YRFSIAW-SRIIPRGKRSRGVNEKGIDYYHGLISGLIKKGITPFVTLFHW-------DLPQTLQDEYEGFLDPQIIDDFK 163 (499)
T ss_dssp EEEECCH-HHHCTTSSGGGCCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCBHHHHHHHCGGGSTHHHHHHH
T ss_pred EEccCCH-HHcCcCCCCCCCCCHHHHHHHHHHHHHHHHcCCcceEEEecC-------chHHHHHHhcccccCHHHHHHHH
Confidence 9999997 78888642 35889999999999999999999999999984 2221111 123465 78999999
Q ss_pred HHHHHHHHHhCCCCcEEEEEeecCCC
Q 046395 273 AIIDFLASRYADHPSLVAIELMNEPK 298 (535)
Q Consensus 273 ~~~~~la~ry~~~p~V~~~el~NEP~ 298 (535)
++.+.++++|++ .|-.|-++|||.
T Consensus 164 ~YA~~v~~~fgd--~Vk~W~T~NEP~ 187 (499)
T d1e4mm_ 164 DYADLCFEEFGD--SVKYWLTINQLY 187 (499)
T ss_dssp HHHHHHHHHHTT--TCCEEEEESCTT
T ss_pred HHHHHHHHhhcc--ccceeEEccCce
Confidence 999999999999 788899999997
|
| >d1hcda_ b.42.5.2 (A:) Histidine-rich actin-binding protein (hisactophilin) {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Histidine-rich actin-binding protein (hisactophilin) domain: Histidine-rich actin-binding protein (hisactophilin) species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.46 E-value=2.6e-14 Score=121.62 Aligned_cols=77 Identities=16% Similarity=0.218 Sum_probs=67.0
Q ss_pred CceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEE--eccCCCC
Q 046395 17 GTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVA--VSATEKF 94 (535)
Q Consensus 17 ~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a--~~~~~~~ 94 (535)
|..|+||| .+|+||||+++| .|+|||+.+ ++||+|.|.+ +++++.||..||+||++++ ++.+.+ ++++++.
T Consensus 40 ~g~iaLks-~~GkYlsa~~~g--~l~~~~~~~--~~~E~F~ie~-~~g~valrs~nGkylsa~~-~g~v~~n~~~~~~~~ 112 (118)
T d1hcda_ 40 GGKVALKT-HCGKYLSIGDHK--QVYLSHHLH--GDHSLFHLEH-HGGKVSIKGHHHHYISADH-HGHVSTKEHHDHDTT 112 (118)
T ss_dssp TTEEEEES-SSSCEEEEEETT--EEEEECCCS--SSSSSBEEEE-ETTEEEEECSTTCEEEECG-GGCEEEESSCSSTTC
T ss_pred CCEEEEEe-CCCCEEEecCCC--cEEEeccCC--CCceEEEEEE-CCCEEEEEeCCCCEEEEcC-CCceeeEcCCCCCCC
Confidence 56899999 699999999876 599999999 9999999998 5689999999999999998 776655 5667778
Q ss_pred CCceEE
Q 046395 95 PEPFQI 100 (535)
Q Consensus 95 ~e~f~~ 100 (535)
||+|.|
T Consensus 113 WE~f~i 118 (118)
T d1hcda_ 113 FEEIII 118 (118)
T ss_dssp BEEECC
T ss_pred ceeEEC
Confidence 999965
|
| >d1dfca1 b.42.5.1 (A:1008-1140) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=3.6e-14 Score=123.55 Aligned_cols=89 Identities=15% Similarity=0.232 Sum_probs=72.3
Q ss_pred cCCCCCCCCCCCCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEe-eCCcEEEeecCCC
Q 046395 5 MFYGIKNNDLLDGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRL-SNKQFIGLENQGN 83 (535)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~-~~~~~v~~~~~~~ 83 (535)
+|.-+...|--+|+.|.||| .+||||||+.+| .|+|||+.+ ++||+|++....++++.||. .||+||+++ ++
T Consensus 38 ~w~le~~~~~~~~~~v~Lrs-~~Gkylsa~~~g--~v~a~~~~~--~~~E~F~~~~~~dG~~~l~s~~nG~yl~~~--~~ 110 (133)
T d1dfca1 38 IWTLEQPPDEAGSAAVCLRS-HLGRYLAADKDG--NVTCEREVP--GPDCRFLIVAHDDGRWSLQSEAHRRYFGGT--ED 110 (133)
T ss_dssp CEECC--------CCBCCBC-TTSCEEEECTTS--CEEEEESSC--CGGGCEECCBCSSSCBCCEETTTCCEEEEE--TT
T ss_pred EEEEEEecCCCCCCEEEEEe-cCCCEEeeccCc--ceEEcCCCC--CCCcEEEEEECCCCEEEEEEcCCCcEEEec--CC
Confidence 45555544445789999998 589999999877 599999999 99999999998889999997 599999997 45
Q ss_pred eEEEeccCCCCCCceEE
Q 046395 84 KLVAVSATEKFPEPFQI 100 (535)
Q Consensus 84 ~~~a~~~~~~~~e~f~~ 100 (535)
.|+|++.+++++|.|.|
T Consensus 111 ~l~a~~~~~~~~e~f~v 127 (133)
T d1dfca1 111 RLSCFAQTVSPAEKWSV 127 (133)
T ss_dssp EEEEEESSCCGGGCBEE
T ss_pred ceEEeCCCCCCCeeEEE
Confidence 69999999999999965
|
| >d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Family 1 of glycosyl hydrolase domain: Beta-glucosidase A species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.40 E-value=4.2e-14 Score=146.98 Aligned_cols=111 Identities=19% Similarity=0.344 Sum_probs=92.6
Q ss_pred hhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCC
Q 046395 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHS 254 (535)
Q Consensus 175 ~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~s 254 (535)
+||+.| ++|+++||++|+|+.|++|.| .++.|+++ +++++.++.++++|+.|.++||.++|+|||. +++
T Consensus 47 d~y~ry--~eDi~ll~~lG~~~yRfSisW-sRI~P~~g-~~n~~gl~~Y~~~i~~l~~~gI~P~VTL~H~-------d~P 115 (423)
T d1vffa1 47 NHWELY--RDDIQLMTSLGYNAYRFSIEW-SRLFPEEN-KFNEDAFMKYREIIDLLLTRGITPLVTLHHF-------TSP 115 (423)
T ss_dssp CHHHHH--HHHHHHHHHHTCCEEEEECCH-HHHCSBTT-BCCHHHHHHHHHHHHHHHHTTCEEEEEEESS-------CCB
T ss_pred chHHhh--HHHHHHHHHhCCCEEEecCcH-HHeecCCC-ccChHHHHHHHHHHHHHHhcCCeeEEeecCC-------cch
Confidence 788887 999999999999999999997 78889875 4899999999999999999999999999984 222
Q ss_pred CCCCCCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 255 GSRDGFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 255 g~~~~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
........|. ++..+.|.++.+.+++++ + .|-.|-++|||..
T Consensus 116 ~~l~~~gGw~~~~~v~~F~~Ya~~~~~~~-d--~Vk~W~T~NEP~~ 158 (423)
T d1vffa1 116 LWFMKKGGFLREENLKHWEKYIEKVAELL-E--KVKLVATFNEPMV 158 (423)
T ss_dssp HHHHHTTGGGSGGGHHHHHHHHHHHHHHT-T--TCCEEEEEECHHH
T ss_pred HHHHhhhhccCHHHHHHHHHHHHHHHHhh-c--ccceeeccCCcce
Confidence 1111223455 789999999999998766 4 6888999999974
|
| >d1kwga2 c.1.8.1 (A:1-393) A4 beta-galactosidase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: A4 beta-galactosidase species: Thermus thermophilus [TaxId: 274]
Probab=99.40 E-value=5e-13 Score=133.29 Aligned_cols=122 Identities=25% Similarity=0.311 Sum_probs=95.1
Q ss_pred hhhCccchHHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC--C-------
Q 046395 175 DHWKSYITEEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL--R------- 245 (535)
Q Consensus 175 ~hw~~~ite~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~--p------- 245 (535)
+||+....++||++||++|+|+||+++.-|..++|.+|. | .++.+|++|+.|+++||+|||.|++. |
T Consensus 9 ~~~~~~~~~~D~~~~~~~G~n~vR~~i~~W~~iep~~G~-~---~~~~~d~~i~~~~~~Gi~~iv~l~~~~~P~w~~~~~ 84 (393)
T d1kwga2 9 EHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGR-L---EWGWLDEAIATLAAEGLKVVLGTPTATPPKWLVDRY 84 (393)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTB-C---CCHHHHHHHHHHHTTTCEEEEECSTTSCCHHHHHHC
T ss_pred ccCCHHHHHHHHHHHHHcCCCEEEecccchhhcCCCCCc-c---CHHHHHHHHHHHHHCCCEEEEEcCCCCCchhhhccC
Confidence 678776669999999999999999998445888998775 7 57899999999999999999999865 2
Q ss_pred CCCCCCCCCC------CCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC
Q 046395 246 VSQNGSPHSG------SRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP 300 (535)
Q Consensus 246 g~~ng~~~sg------~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~ 300 (535)
+.....+..| .....+...+.+++.+.++++.++.+|++++.+..|++.|||...
T Consensus 85 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ne~~~~ 145 (393)
T d1kwga2 85 PEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERYGGLEAVAGFQTDNEYGCH 145 (393)
T ss_dssp GGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHHTTCTTEEEEECSSSTTTT
T ss_pred cccccccCCCcccccccccccCCCCHHHHHHHHHHHHHHHHHhcCCceEEEEeeccccccc
Confidence 1110001111 111112223789999999999999999999999999999999864
|
| >d1dfca3 b.42.5.1 (A:1260-1382) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.39 E-value=3.2e-13 Score=115.87 Aligned_cols=79 Identities=19% Similarity=0.188 Sum_probs=71.2
Q ss_pred CCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCC
Q 046395 16 DGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFP 95 (535)
Q Consensus 16 ~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~ 95 (535)
++..++||+ .+|||||++..| .|+|+|+++ ++||+|.|..- ++++.||..||+||++++ +|.|.|++++|+.|
T Consensus 42 ~~~~~~Lr~-~~gkyl~~~~~g--~v~a~~~~~--~~~e~F~~~~~-~g~~alra~nG~yl~a~~-~G~l~a~~~~~g~~ 114 (123)
T d1dfca3 42 DTKKCAFRT-HTGKYWTLTATG--GVQSTASSK--NASCYFDIEWR-DRRITLRASNGKFVTSKK-NGQLAASVETAGDS 114 (123)
T ss_dssp TTCCEEEEE-TTTEEEEECTTS--BEEEEESSC--CGGGCBEEEEE-TTEEEEECTTSSBCEECS-SSBEESCCSSCCSS
T ss_pred CCCEEEEEe-CCCCEEEEcCCC--cEEEccccC--CCceEEEEEEe-CCeEEEEeCCCCEEEeCC-CCEEEEccCCCCCc
Confidence 467899996 899999998665 599999999 99999999874 689999999999999988 88899999999999
Q ss_pred CceEEE
Q 046395 96 EPFQIT 101 (535)
Q Consensus 96 e~f~~~ 101 (535)
|.|.|.
T Consensus 115 e~f~i~ 120 (123)
T d1dfca3 115 ELFLMK 120 (123)
T ss_dssp SEEEEE
T ss_pred eEEEEE
Confidence 999764
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.32 E-value=2.3e-12 Score=108.01 Aligned_cols=100 Identities=16% Similarity=0.230 Sum_probs=78.0
Q ss_pred eeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCCce
Q 046395 19 QVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEPF 98 (535)
Q Consensus 19 ~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e~f 98 (535)
+|-|| -..| |||+..+++ .|.|||+ .||||+|-+ ++++|.||..||+|+++++ +|.|++.+++| |.|
T Consensus 3 ~lvLr-g~~G-fv~~~~~~~-~l~~Nr~-----~~e~F~l~~-~~g~y~lr~~~gkyw~~~~-dG~l~~~~~~~---~~F 69 (111)
T d1dfca4 3 IIVFR-GEHG-FIGCRKVTG-TLDANRS-----SYDVFQLEF-NDGAYNIKDSTGKYWTVGS-DSAVTSSGDTP---VDF 69 (111)
T ss_dssp SBCCE-ETTE-EEEECSSSC-BEEEEES-----SCCCBEEEE-ETTEEEEECTTSCBCEECS-SCBEESCCSSC---CCB
T ss_pred EEEEE-cccc-eEEecCCCC-eEEEcCC-----CCcEEEEEE-cCCEEEEEcCCCCEEEEcC-CCcEEeCCCCC---CCE
Confidence 35555 3444 787777665 5999993 599999965 7899999999999999998 77788777654 779
Q ss_pred EEEecCCCCceeEEEecCCceEEEecccEEecCCCC
Q 046395 99 QITRKNGEPHRVRFRASNGYFLQAKSEMQVTADYKG 134 (535)
Q Consensus 99 ~~~~~~~~~~~v~I~~~nG~flq~~~~~~v~a~~~~ 134 (535)
.|..+.+ +.+.|++ ||+||++..+..+.|+...
T Consensus 70 ~le~~~~--~~~~~~a-nGkYL~~~~~G~L~A~~~~ 102 (111)
T d1dfca4 70 FFEFCDY--NKVAIKV-GGRYLKGDHAGVLKASAET 102 (111)
T ss_dssp EEEEEET--TEEEEEE-TTEEEEECGGGBEEEEESS
T ss_pred EEEEeCC--CEEEEcc-CCeEEEeCCCCeEEeCCCC
Confidence 8888743 3688886 9999999888777776543
|
| >d1tg7a5 c.1.8.14 (A:41-394) Beta-galactosidase LacA, N-terminal domain {Penicillium sp. [TaxId: 5081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Glycosyl hydrolases family 35 catalytic domain domain: Beta-galactosidase LacA, N-terminal domain species: Penicillium sp. [TaxId: 5081]
Probab=99.30 E-value=1.4e-12 Score=132.22 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=102.4
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCC-CC-----CCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHAL-RV-----SQNGSPHSGS 256 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg-----~~ng~~~sg~ 256 (535)
+++|++||++|+|+||++|. |...+|.++. |+-..+..|+++|+.|+++||+|||.+... ++ +...+.. ..
T Consensus 39 ~~~l~~mk~~G~n~vr~~~~-W~~~ep~~g~-~df~~~~~l~~~l~~a~~~Gl~vil~~g~~~~~~w~~~~~p~~~~-~~ 115 (354)
T d1tg7a5 39 IDIFEKVKALGFNCVSFYVD-WALLEGNPGH-YSAEGIFDLQPFFDAAKEAGIYLLARPGPYINAEVSGGGFPGWLQ-RV 115 (354)
T ss_dssp HHHHHHHHTTTCCEEEEECC-HHHHCSBTTB-CCCCGGGCSHHHHHHHHHHTCEEEEECCSCCCTTBGGGGCCGGGG-GC
T ss_pred HHHHHHHHHcCCCEEEEecc-hhccCCCCCc-ccccchhhHHHHHHHHHHcCCEEEEcCCCCcCcccccCCCCcccc-cC
Confidence 89999999999999999998 5888998876 887788889999999999999999987532 11 0001100 00
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHH-----hCCCCcEEEEEeecCCCCCCC--ChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 257 RDGFQEWSDSDIQETVAIIDFLASR-----YADHPSLVAIELMNEPKAPDL--KLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 257 ~~~~~~W~~~~~~~~~~~~~~la~r-----y~~~p~V~~~el~NEP~~~~~--~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
......-.+.+.+...++++.++++ |+++|.|++|+|-||...... .....+.+.+.+.+..|+.+...++..
T Consensus 116 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~ii~wqi~NE~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~ 195 (354)
T d1tg7a5 116 DGILRTSDEAYLKATDNYASNIAATIAKAQITNGGPIILYQPENEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFIS 195 (354)
T ss_dssp SSCTTSSCHHHHHHHHHHHHHHHHHHHHTBGGGTSSEEEECCSSCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBC
T ss_pred CCcccCCCHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeccccCccccccccchHHHHHHHHHhhhhccCcccceEe
Confidence 0000011156777777777777765 689999999999999875311 112235566666777777777766554
Q ss_pred cCCC
Q 046395 330 SNRL 333 (535)
Q Consensus 330 ~~~~ 333 (535)
...+
T Consensus 196 ~~~~ 199 (354)
T d1tg7a5 196 NDAW 199 (354)
T ss_dssp CBSS
T ss_pred ccch
Confidence 4433
|
| >d1yq2a5 c.1.8.3 (A:313-609) beta-Galactosidase, domain 3 {Arthrobacter sp. c2-2 [TaxId: 192168]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Arthrobacter sp. c2-2 [TaxId: 192168]
Probab=99.13 E-value=1.9e-10 Score=113.16 Aligned_cols=119 Identities=22% Similarity=0.177 Sum_probs=87.8
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
+.||++||++|+|+||+... |.. +.++++|.++||.|+.++...-.... ..+ ......
T Consensus 39 ~~di~l~k~~G~N~iR~~h~--------p~~----------~~~~d~cD~~Gilv~~e~~~~~~~~~---~~~-~~~~~~ 96 (297)
T d1yq2a5 39 REDLALMKRFNVNAIRTSHY--------PPH----------PRLLDLADEMGFWVILECDLETHGFE---AGG-WVENPS 96 (297)
T ss_dssp HHHHHHHHHTTCCEEEETTS--------CCC----------HHHHHHHHHHTCEEEEECSCBCGGGT---TTT-TTTCGG
T ss_pred HHHHHHHHHCCCCEEEccCC--------CCh----------HHHHHHHHhcCCEEEEeecccccccc---ccC-ccCCcc
Confidence 79999999999999999421 111 34789999999999999864211000 000 000001
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
-.+...+.+.+.++.|.+|+++||+|++|.+.||+.. ....+++.+.+++.+|++++..+.
T Consensus 97 ~~~~~~~~~~~~~~emV~r~~NHPSIi~W~~gNE~~~--------~~~~~~~~~~~k~~D~tRp~~~~~ 157 (297)
T d1yq2a5 97 DVPAWRDALVDRMERTVERDKNHPSIVMWSLGNESGT--------GSNLAAMAAWAHARDSSRPVHYEG 157 (297)
T ss_dssp GCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCC--------CHHHHHHHHHHHHHCTTSCEECTT
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCceEeecccccCCc--------hHHHHHHHHHHHHhccCCcccccC
Confidence 1156788899999999999999999999999999874 235677889999999999987654
|
| >d2vzsa5 c.1.8.3 (A:336-674) Exochitosanase CsxA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Exochitosanase CsxA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.04 E-value=8.6e-10 Score=109.63 Aligned_cols=121 Identities=21% Similarity=0.277 Sum_probs=89.5
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++||++||++|+|+||+ |...+ + +.++++|.++||+|+.++...+...... .+ ......
T Consensus 42 ~~~l~~~k~~G~N~iR~----~~~~~--~------------~~f~d~~D~~Gi~V~~e~~~~~~w~~~~--~~-~~~~~~ 100 (339)
T d2vzsa5 42 ADKLKYVLNLGLNTVRL----EGHIE--P------------DEFFDIADDLGVLTMPGWECCDKWEGQV--NG-EEKGEP 100 (339)
T ss_dssp HHHHHHHHHTTCCEEEE----ESCCC--C------------HHHHHHHHHHTCEEEEECCSSSGGGTTT--ST-TSSSCC
T ss_pred HHHHHHHHHcCCCEEEe----cCCCC--C------------HHHHHHHHHCCCeEecccccCccccccC--Cc-ccccCC
Confidence 79999999999999998 22211 1 3478899999999999987543211100 01 112233
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
+.+...+.+.+.++.+++|+++||+|++|.+.||+... ..+.+.+.+.+++.||.+.++.+.
T Consensus 101 ~~p~~~~~~~~~~~~~v~r~rnHPsvi~W~~gNE~~~~-------~~~~~~~~~~~~~~D~~r~~~~~s 162 (339)
T d2vzsa5 101 WVESDYPIAKASMFSEAERLRDHPSVISFHIGSDFAPD-------RRIEQGYLDAMKAADFLLPVIPAA 162 (339)
T ss_dssp CCTTHHHHHHHHHHHHHHHHTTCTTBCCEESCSSSCCC-------HHHHHHHHHHHHHTTCCSCEESCS
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEecCcCCCch-------HHHHHHHHHHHHHhCCCceeEecC
Confidence 44678899999999999999999999999999998742 245566778899999998876543
|
| >d1jz8a5 c.1.8.3 (A:334-625) beta-Galactosidase, domain 3 {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: beta-Galactosidase, domain 3 species: Escherichia coli [TaxId: 562]
Probab=98.96 E-value=2.5e-09 Score=104.33 Aligned_cols=116 Identities=20% Similarity=0.177 Sum_probs=87.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++||++||++|+|+||+... +.. +.++++|.++||.|+.++...-.+ ........
T Consensus 40 ~~di~l~k~~G~N~iR~~~~--------p~~----------~~~~~~~D~~Gilv~~e~~~~~~~-------~~~~~~~~ 94 (292)
T d1jz8a5 40 VQDILLMKQNNFNAVRCSHY--------PNH----------PLWYTLCDRYGLYVVDEANIETHG-------MVPMNRLT 94 (292)
T ss_dssp HHHHHHHHHTTCCEEECTTS--------CCC----------HHHHHHHHHHTCEEEEECSCBCTT-------SSSTTTTT
T ss_pred HHHHHHHHhcCCCEEEecCC--------CCh----------HHHHHHHhhcCCeEEeeeeecccC-------CcccCCCC
Confidence 79999999999999998321 111 247899999999999998642100 00000111
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
..+...+.+.+.++.+.+|+++||+|++|.+.||+... ...+...+.+++.+|.+++..+.
T Consensus 95 ~~~~~~~~~~~~~~~~v~r~~nHPSvi~W~~~NE~~~~--------~~~~~~~~~~~~~d~~r~~~~~~ 155 (292)
T d1jz8a5 95 DDPRWLPAMSERVTRMVQRDRNHPSVIIWSLGNESGHG--------ANHDALYRWIKSVDPSRPVQYEG 155 (292)
T ss_dssp TCGGGHHHHHHHHHHHHHHHTTCTTEEEEECCSSCCCC--------HHHHHHHHHHHHHCTTSCEECCT
T ss_pred CCHHHHHHHHHHHHHHHHHccCCCcHHHhcccccCCcc--------hhhHHHHHHHHHHhhcCcccccc
Confidence 12678899999999999999999999999999999742 35566778899999999987654
|
| >d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces halstedii [TaxId: 1944]
Probab=98.95 E-value=1.8e-08 Score=99.07 Aligned_cols=210 Identities=15% Similarity=0.098 Sum_probs=128.2
Q ss_pred CCCEEEeCCc-cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCCCCCCCCCCCCCCCCCCCCCCC-hHH
Q 046395 193 GLNAVRIPVG-WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHALRVSQNGSPHSGSRDGFQEWS-DSD 267 (535)
Q Consensus 193 G~N~VRipv~-~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~~pg~~ng~~~sg~~~~~~~W~-~~~ 267 (535)
-||.+-..-. -|..++|.+|. | .++.+|++|++|+++||+|. |-+|.. .. .....+. ++.
T Consensus 36 ~fn~~t~~n~~kW~~~ep~~G~-~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~~----~p-------~w~~~~~~~~~ 100 (302)
T d1nq6a_ 36 QFGSVTPENEMKWDAVESSRNS-F---SFSAADRIVSHAQSKGMKVRGHTLVWHSQ----LP-------GWVSPLAATDL 100 (302)
T ss_dssp HCSEEEESSTTSHHHHCSBTTB-C---CCHHHHHHHHHHHHHTCEEEEEEEEESTT----CC-------TTTTTSCHHHH
T ss_pred hCCeeeeccCccchhhcCCCCc-C---CcHHHHHHHHHHHHCCCEEEeeccccccc----cc-------ccccccchHHH
Confidence 3888887522 36778888875 6 67899999999999999986 333321 10 0111233 566
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC-----ChHHH----HHHHHHHHHHHHhcCCCcEEEEcCC--CCCC
Q 046395 268 IQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL-----KLDSL----KTYYKAGYDTVRKYSSSAYVILSNR--LGGE 336 (535)
Q Consensus 268 ~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~-----~~~~~----~~~~~~~~~aIR~~~p~~~ii~~~~--~g~~ 336 (535)
.+.+.++++.+++||++ .|..||++|||..... ..... ..+++.+++++|+++|+..+++.+. .+..
T Consensus 101 ~~~~~~~i~~v~~ry~g--~i~~WdV~NEp~~~~~~~~~~~~~~~~~~g~~~~~~a~~~ar~~dP~a~l~~nd~~~~~~~ 178 (302)
T d1nq6a_ 101 RSAMNNHITQVMTHYKG--KIHSWDVVNEAFQDGGSGARRSSPFQDKLGNGFIEEAFRTARTVDADAKLCYNDYNTDGQN 178 (302)
T ss_dssp HHHHHHHHHHHHHHTTT--SCSEEEEEECCBCSSSCCCBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCSSSS
T ss_pred HHHHHHHHHHHHHHcCC--CcceEEEeccccccCCCCccCCChhhhhccHHHHHHHHHHHHHhCCCCceeecccccccCc
Confidence 77889999999999999 6889999999964311 11111 2478999999999999999888641 1111
Q ss_pred h---------hhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC
Q 046395 337 W---------SELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE 407 (535)
Q Consensus 337 ~---------~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~ 407 (535)
. ..+.......+.+.+..|++.... +.+.. . +.+..+.. .+.|++|+|++....
T Consensus 179 ~~~~~~~~~i~~l~~~~~~id~iG~q~H~~~~~~------~~~~~----~----~~l~~~~~-~g~pi~iTE~d~~~~-- 241 (302)
T d1nq6a_ 179 AKSNAVYEMVKDFKQRGVPIDCVGFQSHFNSNSP------VPSDF----Q----ANLQRFAD-LGVDVQITELDIEGS-- 241 (302)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTBC------CCTTH----H----HHHHHHHT-TTCEEEEEEEEECCC--
T ss_pred hhhHHHHHHHHHHHhccCCcceeEEEeccCCCCC------ChHHH----H----HHHHHHHh-cCCceEEecCCCCCC--
Confidence 1 111222244667778888774321 12211 1 12333333 356799999976432
Q ss_pred CCCHHHHHHHHHHHHHHHhh-CC-cceEEEeeee
Q 046395 408 GASKRDYQRFAEAQLDVYGR-AT-FGWAYWAYKF 439 (535)
Q Consensus 408 ~~~~~~~~~~~~~ql~~~~~-~~-~Gw~~W~~k~ 439 (535)
.+...++++..+..+-+ .. .|-++|.+..
T Consensus 242 ---~~~Qa~~~~~~~~~~~~~p~v~~i~~W~~~D 272 (302)
T d1nq6a_ 242 ---GSAQAANYTKVVNACLAVTRCTGITVWGVTD 272 (302)
T ss_dssp ---HHHHHHHHHHHHHHHHTSTTEEEEEESCSCG
T ss_pred ---cHHHHHHHHHHHHHHHccCCceEEEEeCCcc
Confidence 23233444444444433 22 3666777654
|
| >d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Cellulomonas fimi [TaxId: 1708]
Probab=98.92 E-value=1.3e-08 Score=100.49 Aligned_cols=221 Identities=15% Similarity=0.130 Sum_probs=131.8
Q ss_pred HHHHcCCCEEEeCCc-cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCC-CCCCCCCCCCCCCCCCCCC-
Q 046395 188 FMSQNGLNAVRIPVG-WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALR-VSQNGSPHSGSRDGFQEWS- 264 (535)
Q Consensus 188 ~ik~~G~N~VRipv~-~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~p-g~~ng~~~sg~~~~~~~W~- 264 (535)
.+-...||.+..--. -|..++|.+|. | .++.+|++|++|+++||.|+- |... +++. ......+.
T Consensus 31 ~~~~~~fn~~t~~n~~kW~~iep~~g~-~---~~~~~D~~v~~a~~~gl~v~g--h~lvw~~~~-------p~~~~~~~~ 97 (312)
T d1fh9a_ 31 AIADSEFNLVVAENAMKWDATEPSQNS-F---SFGAGDRVASYAADTGKELYG--HTLVWHSQL-------PDWAKNLNG 97 (312)
T ss_dssp HHHHHHCSEEEESSTTSHHHHCSBTTB-C---CCHHHHHHHHHHHHHTCEEEE--EEEEESSSC-------CHHHHTCCH
T ss_pred HHHHHhCCcccccccCcchhhcCCCCc-C---CcHHHHHHHHHHHHCCCEEEE--ecccccccc-------cccccccch
Confidence 333446888865422 25778888875 6 579999999999999999863 2110 0000 00011122
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----ChHHH----HHHHHHHHHHHHhcCCCcEEEEcCC--CC
Q 046395 265 DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----KLDSL----KTYYKAGYDTVRKYSSSAYVILSNR--LG 334 (535)
Q Consensus 265 ~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~~~~~----~~~~~~~~~aIR~~~p~~~ii~~~~--~g 334 (535)
++..+.+.++++.+++||++ .|..|+++|||..... ..... ..|++.++.++|+++|+..+++.+. .+
T Consensus 98 ~~~~~~~~~~i~~v~~ry~g--~i~~WdV~NEp~~~~~~~~~~~~~~~~lg~~~i~~a~~~ar~~dP~a~l~~n~~~~~~ 175 (312)
T d1fh9a_ 98 SAFESAMVNHVTKVADHFEG--KVASWDVVNEAFADGGGRRQDSAFQQKLGNGYIETAFRAARAADPTAKLCINDYNVEG 175 (312)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--TCCEEEEEECCBCTTSSBCSSCHHHHHHCTTHHHHHHHHHHHHCSSSEEEEEESSCSS
T ss_pred HHHHHHHHHHHHHHHHhcCC--CceEEEEecccccCCCCCcCCchHHHhhhHHHHHHHHHHHHhhCCCceEEeecCcccc
Confidence 45667788999999999998 6999999999975321 11111 2578999999999999999887541 11
Q ss_pred CC--h-------hhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcC
Q 046395 335 GE--W-------SELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWE 405 (535)
Q Consensus 335 ~~--~-------~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~ 405 (535)
.. . ..+.......+.+.+..|++.... ..+ + . ..+..+... +.|++|+|++....
T Consensus 176 ~~~~~~~~~~~i~~l~~~g~~id~ig~q~H~~~~~~-------~~~-~---~----~~l~~~~~~-g~pi~iTE~d~~~~ 239 (312)
T d1fh9a_ 176 INAKSNSLYDLVKDFKARGVPLDCVGFQSHLIVGQV-------PGD-F---R----QNLQRFADL-GVDVRITELDIRMR 239 (312)
T ss_dssp SSHHHHHHHHHHHHHHHHTCCCCEEEECCEEETTCC-------CTT-H---H----HHHHHHHTT-TCEEEEEEEEEEEE
T ss_pred cchhHHHHHHHHHHHHhCCCCccceeEeecccccCc-------HHH-H---H----HHHHHHHhc-CCceEEeccccccC
Confidence 11 1 111122234577788888875421 111 1 1 123333333 55699999986533
Q ss_pred CCCCC--HHHHHHHHHHHHHHHhhCC--cceEEEeeee
Q 046395 406 AEGAS--KRDYQRFAEAQLDVYGRAT--FGWAYWAYKF 439 (535)
Q Consensus 406 ~~~~~--~~~~~~~~~~ql~~~~~~~--~Gw~~W~~k~ 439 (535)
..... .+...++++..+..+-+.. .|.++|.+..
T Consensus 240 ~~~~~~~~~~QA~~~~~~~~~~~~~~~v~~v~~W~~~D 277 (312)
T d1fh9a_ 240 TPSDATKLATQAADYKKVVQACMQVTRCQGVTVWGITD 277 (312)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhcCCccEEEEeCCcc
Confidence 22111 1122345555555554433 3677888754
|
| >d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Thermotoga maritima [TaxId: 2336]
Probab=98.87 E-value=9.2e-09 Score=102.12 Aligned_cols=216 Identities=13% Similarity=0.197 Sum_probs=126.7
Q ss_pred cCCCEEEeC--CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEE---ecCC-CCCCCCCCCCCCCCCCCCCCC-
Q 046395 192 NGLNAVRIP--VGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIV---DLHA-LRVSQNGSPHSGSRDGFQEWS- 264 (535)
Q Consensus 192 ~G~N~VRip--v~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIl---dlH~-~pg~~ng~~~sg~~~~~~~W~- 264 (535)
.-||.+-.. +- |..++|.+|. | .++.+|++|++|.++||.|.- -+|. .|.. .. .....
T Consensus 37 ~~fn~~t~~n~~k-W~~iEp~~G~-~---~~~~~D~~v~~a~~~gi~v~gh~l~W~~~~p~~-----~~-----~~~~~~ 101 (324)
T d1vbua1 37 REFNILTPENQMK-WDTIHPERDR-Y---NFTPAEKHVEFAEENDMIVHGHTLVWHNQLPGW-----IT-----GREWTK 101 (324)
T ss_dssp HHCSEEEESSTTS-HHHHCCBTTE-E---ECHHHHHHHHHHHHTTCEEEEEEEECSSSCCHH-----HH-----TSCCCH
T ss_pred HhcCccccccCCc-hHHhcCCCCc-c---ChHHHHHHHHHHHHCCCEEEEecCcccccCCcc-----cc-----ccccch
Confidence 358888765 33 5778898876 6 688999999999999999853 2221 1110 00 01112
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----Ch--H-HHHHHHHHHHHHHHhcCCCcEEEEcCCCC-C-
Q 046395 265 DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----KL--D-SLKTYYKAGYDTVRKYSSSAYVILSNRLG-G- 335 (535)
Q Consensus 265 ~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~~--~-~~~~~~~~~~~aIR~~~p~~~ii~~~~~g-~- 335 (535)
++..+.+.++++.+++||++ .|..||++|||..... +. . ....+++.+++++|+++|+..+++.+... .
T Consensus 102 ~~~~~~~~~~i~~v~~ry~g--~v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~a~~~ar~~dP~a~l~~n~~~~~~~ 179 (324)
T d1vbua1 102 EELLNVLEDHIKTVVSHFKG--RVKIWDVVNEAVSDSGTYRESVWYKTIGPEYIEKAFRWAKEADPDAILIYNDYSIEEI 179 (324)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--TCCEEEEEESCBCTTSSBCCCHHHHHHCTHHHHHHHHHHHHHCTTSEEEEEESSCSSS
T ss_pred HHHHHHHHHHHHHHHHhcCC--CceEEEEecccccCCCCccCChHHHHhHHHHHHHHHHHHHHhCCCCEEEEecCCCCCC
Confidence 46678889999999999998 6788999999965321 11 1 12467899999999999999888864211 1
Q ss_pred Ch--h-------hhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCC
Q 046395 336 EW--S-------ELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEA 406 (535)
Q Consensus 336 ~~--~-------~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~ 406 (535)
.. . .+.......+.+.+..|++... .+. +.++. .+..+... +.|++|+|++.....
T Consensus 180 ~~~~~~~~~~v~~l~~~~~~id~iG~q~h~~~~~------~~~----~~~~~----~l~~~~~~-g~pi~iTE~~~~~~~ 244 (324)
T d1vbua1 180 NAKSNFVYNMIKELKEKGVPVDGIGFQMHIDYRG------LNY----DSFRR----NLERFAKL-GLQIYITEMDVRIPL 244 (324)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCCEEEECCEEETTC------CCH----HHHHH----HHHHHHTT-TCEEEEEEEEEEEES
T ss_pred cHhHHHHHHHHHHHHhCCCCcceeEeeeccCcCC------CCH----HHHHH----HHHHHHhc-CCceeeeeceeccCC
Confidence 11 1 1111113345555666654321 122 22222 23334433 566999999864322
Q ss_pred CCCC---HHHHHHHHHHHHHHHhhC-C-cceEEEeeee
Q 046395 407 EGAS---KRDYQRFAEAQLDVYGRA-T-FGWAYWAYKF 439 (535)
Q Consensus 407 ~~~~---~~~~~~~~~~ql~~~~~~-~-~Gw~~W~~k~ 439 (535)
.... .+...+++...+..+-+. . .|-++|.+..
T Consensus 245 ~~~~~~~~~~QA~~~~~~~~~~~~~p~v~gi~~W~~~D 282 (324)
T d1vbua1 245 SGSEEYYLKKQAEVCAKIFDICLDNPAVKAIQFWGFTD 282 (324)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHTSTTEEEEEESCSBT
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhcCCeEEEEEecccc
Confidence 1111 112224444444444332 2 3666787754
|
| >d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Clostridium thermocellum, XynZ [TaxId: 1515]
Probab=98.73 E-value=3.6e-08 Score=97.33 Aligned_cols=222 Identities=12% Similarity=0.116 Sum_probs=126.5
Q ss_pred HcCCCEEEeC-CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEe---cCC-CCCCCCCCCCCCCCCCCCCCC-
Q 046395 191 QNGLNAVRIP-VGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVD---LHA-LRVSQNGSPHSGSRDGFQEWS- 264 (535)
Q Consensus 191 ~~G~N~VRip-v~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIld---lH~-~pg~~ng~~~sg~~~~~~~W~- 264 (535)
..-||.+=.- -.-|..++|.+|. | .++.+|++|++|+++||.|.-- +|. .|. +. ....+.
T Consensus 35 ~~~fn~~t~~n~~kW~~iep~~G~-~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~----w~------~~~~~~~ 100 (320)
T d1xyza_ 35 QREFSMVVCENEMKFDALQPRQNV-F---DFSKGDQLLAFAERNGMQMRGHTLIWHNQNPS----WL------TNGNWNR 100 (320)
T ss_dssp HHHCSEEEESSTTSHHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCH----HH------HTSCCCH
T ss_pred HHhCCeeeecccCchHHhCCCCCc-c---ChHHHHHHHHHHHHCCCEEEeeccccCCCCCc----ch------hccccch
Confidence 3347777421 1236788998876 7 5789999999999999998632 221 111 00 001122
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC-----Ch-H--HHHHHHHHHHHHHHhcCCCcEEEEcCC--CC
Q 046395 265 DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL-----KL-D--SLKTYYKAGYDTVRKYSSSAYVILSNR--LG 334 (535)
Q Consensus 265 ~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~-----~~-~--~~~~~~~~~~~aIR~~~p~~~ii~~~~--~g 334 (535)
++..+.+.++++.+++||++ .|..||++|||..... .. . ...+++..++.++|+.+|...+++.+. ..
T Consensus 101 ~~~~~~~~~~i~~v~~ry~g--~i~~WeV~NEp~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~dp~a~l~~n~~~~~~ 178 (320)
T d1xyza_ 101 DSLLAVMKNHITTVMTHYKG--KIVEWDVANECMDDSGNGLRSSIWRNVIGQDYLDYAFRYAREADPDALLFYNDYNIED 178 (320)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--TCSEEEEEESCBCTTSSSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEESSCSS
T ss_pred HHHHHHHHHHHHHHHHHcCC--CceeEEeecccccCCCccccCcHHhhhccHHHHHHHHHHHHHhccCcEEEeecccccc
Confidence 45677889999999999999 5888999999975311 11 1 113678999999999999998877542 21
Q ss_pred CCh--hhhhc----c-cCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC
Q 046395 335 GEW--SELLS----F-ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE 407 (535)
Q Consensus 335 ~~~--~~~~~----~-~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~ 407 (535)
... ..+.. . ..+..-..+.+|.|.... . .......+.. .+..+... +.|++|+|++......
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~id~iG~q~h~~~~-----~-~~~~~~~~~~----~l~~~~~~-g~pI~iTE~~~~~~~~ 247 (320)
T d1xyza_ 179 LGPKSNAVFNMIKSMKERGVPIDGVGFQCHFING-----M-SPEYLASIDQ----NIKRYAEI-GVIVSFTEIDIRIPQS 247 (320)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESS-----C-CHHHHHHHHH----HHHHHHHT-TCEEEEEEEEEEEETT
T ss_pred ccHHHHHHHHHHHHHHhCcCccceEEecccccCC-----C-CchHHHHHHH----HHHHHHhc-CCceeeeccccccCCC
Confidence 111 11111 1 122233445555443211 1 1112222322 23444433 4569999998543211
Q ss_pred CCC---HHHHHHHHHHHHHHHhhC-C-cceEEEeeee
Q 046395 408 GAS---KRDYQRFAEAQLDVYGRA-T-FGWAYWAYKF 439 (535)
Q Consensus 408 ~~~---~~~~~~~~~~ql~~~~~~-~-~Gw~~W~~k~ 439 (535)
... .+.--++++..+..+.+. . .|-++|.+..
T Consensus 248 ~~~~~~~~~QA~~~~~~~~~~~~~p~v~gi~~W~~~D 284 (320)
T d1xyza_ 248 ENPATAFQVQANNYKELMKICLANPNCNTFVMWGFTD 284 (320)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHCTTEEEEEESCSBT
T ss_pred CCchhHHHHHHHHHHHHHHHHHhCCCeeEEEEeeccc
Confidence 111 111224555555555443 3 3777888864
|
| >d1ta3b_ c.1.8.3 (B:) Xylanase A, catalytic core {Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
Probab=98.70 E-value=1.3e-07 Score=92.75 Aligned_cols=210 Identities=17% Similarity=0.204 Sum_probs=125.9
Q ss_pred CCEEEeCCc--cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCC-CCCCCCCCCCCCCCCCCCC-hHHHH
Q 046395 194 LNAVRIPVG--WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALR-VSQNGSPHSGSRDGFQEWS-DSDIQ 269 (535)
Q Consensus 194 ~N~VRipv~--~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~p-g~~ng~~~sg~~~~~~~W~-~~~~~ 269 (535)
||.+- |-. -|..++|.+|. | .++.+|++|++|+++||.|.- |..- +.+...... .... ++..+
T Consensus 37 fn~~t-~en~~kW~~iEp~~G~-~---~~~~~D~~v~~a~~~gl~v~g--H~lvW~~~~P~w~~------~~~~~~~~~~ 103 (301)
T d1ta3b_ 37 FGVIT-PENSMKWDALEPSQGN-F---GWSGADYLVDYATQHNKKVRG--HTLVWHSQLPSWVS------SIGDANTLRS 103 (301)
T ss_dssp CSEEE-ESSTTSHHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEE--EEEECSSSCCHHHH------TCCCHHHHHH
T ss_pred CCeec-ccccCcchhhCCCCCc-C---CcHHHHHHHHHHHHCCCEEEE--eccccCccCchhhh------ccccHHHHHH
Confidence 77775 322 26778998875 6 678999999999999998764 3210 001000000 0011 35567
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC----Ch-HH--HHHHHHHHHHHHHhcCCCcEEEEcC--CCCCCh---
Q 046395 270 ETVAIIDFLASRYADHPSLVAIELMNEPKAPDL----KL-DS--LKTYYKAGYDTVRKYSSSAYVILSN--RLGGEW--- 337 (535)
Q Consensus 270 ~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~----~~-~~--~~~~~~~~~~aIR~~~p~~~ii~~~--~~g~~~--- 337 (535)
.+.++++.+++||++ .|..||++|||..... +. .. -..|+..+++++|+++|+..+++.+ ..+...
T Consensus 104 ~~~~~I~~v~~rY~g--~i~~WDVvNEp~~~~~~~~~~~~~~~~g~~~~~~af~~A~~~dP~a~l~~nd~~~~~~~~~~~ 181 (301)
T d1ta3b_ 104 VMTNHINEVVGRYKG--KIMHWDVVNEIFNEDGTFRNSVFYNLLGEDFVRIAFETARAADPDAKLYINDYNLDSASYAKT 181 (301)
T ss_dssp HHHHHHHHHHHHTTT--SCSEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEESCCCCTTSHHH
T ss_pred HHHHHHHHHHHhcCC--CcceEEeecccccCCCCcccchhhhccchHHHHHHHHHHHHhCcCceeeeccccccccchHHH
Confidence 788999999999998 6889999999954211 11 11 1368999999999999999888753 221111
Q ss_pred hhh-------hcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCC
Q 046395 338 SEL-------LSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGAS 410 (535)
Q Consensus 338 ~~~-------~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~ 410 (535)
..+ ..-....+.+.+..|+.... .+.++.. ..+..+...+.|++.|+|++... ..
T Consensus 182 ~~~~~~v~~l~~~g~~idgIG~Q~H~~~~~------~~~~~~~--------~~l~~~~~~g~~~i~iTE~dv~~----~q 243 (301)
T d1ta3b_ 182 QAMASYVKKWLAEGVPIDGIGSQAHYSSSH------WSSTEAA--------GALSSLANTGVSEVAITELDIAG----AA 243 (301)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEECCEECTTC------CCGGGHH--------HHHHHHHTTCCSEEEEEEEEETT----CC
T ss_pred HHHHHHHHHHHhCCCCcceeeeeeecCCCC------CCHHHHH--------HHHHHHHHcCCCcccccccccch----HH
Confidence 111 11123456677777765331 1122211 12333444555679999997542 34
Q ss_pred HHHHHHHHHHHHHHHhh-CCcceEEEeeee
Q 046395 411 KRDYQRFAEAQLDVYGR-ATFGWAYWAYKF 439 (535)
Q Consensus 411 ~~~~~~~~~~ql~~~~~-~~~Gw~~W~~k~ 439 (535)
...|.+++... ++. ...|.++|.+..
T Consensus 244 a~~~~~~~~~~---~~~p~v~gi~~Wg~~D 270 (301)
T d1ta3b_ 244 SSDYLNLLNAC---LNEQKCVGITVWGVSD 270 (301)
T ss_dssp HHHHHHHHHHH---HTCTTEEEEEESCSBG
T ss_pred HHHHHHHHHHH---HcccCceEEEEcCCcc
Confidence 55666665443 332 234777887754
|
| >d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase 10c species: Cellvibrio japonicus [TaxId: 155077]
Probab=98.67 E-value=6.9e-08 Score=97.33 Aligned_cols=185 Identities=15% Similarity=0.163 Sum_probs=111.8
Q ss_pred cCCCEEEe--CCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCCCCCCCCCCCCCCCCCCCCCCC-h
Q 046395 192 NGLNAVRI--PVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHALRVSQNGSPHSGSRDGFQEWS-D 265 (535)
Q Consensus 192 ~G~N~VRi--pv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~~pg~~ng~~~sg~~~~~~~W~-~ 265 (535)
.-||.|-. .+- |..++|.+|. | .++.+|++|++|+++||.|. +-+|... +..... ...... +
T Consensus 45 ~~fn~~t~eN~mK-W~~iep~~G~-~---nf~~~D~~v~~a~~~gi~v~GH~lvW~~~~--~~~~~~-----~~~~~~~~ 112 (364)
T d1us3a2 45 KHFNHLTAGNIMK-MSYMQPTEGN-F---NFTNADAFVDWATENNMTVHGHALVWHSDY--QVPNFM-----KNWAGSAE 112 (364)
T ss_dssp HHCSEEEESSTTS-HHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEEECCGG--GSCHHH-----HTCCSCHH
T ss_pred HhCCeeeecccCC-hHHhcCCCCc-c---CcHHHHHHHHHHHHCCCEEEEeecCCCccc--CCcccc-----ccCCccHH
Confidence 34666644 233 5677888875 6 67999999999999999986 3334210 000000 000112 3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC-------ChHHH------HHHHHHHHHHHHhcCCCcEEEEcCC
Q 046395 266 SDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL-------KLDSL------KTYYKAGYDTVRKYSSSAYVILSNR 332 (535)
Q Consensus 266 ~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~-------~~~~~------~~~~~~~~~aIR~~~p~~~ii~~~~ 332 (535)
+..+.+.++++.+++||++...|..||++|||..... ....+ ..|+..+.+++|+.+|+..+++.+.
T Consensus 113 ~~~~~~~~~I~~vv~ry~~~G~I~~WDVvNEp~~~~~~~~~~~~~~~~~~~~g~~~~~i~~Af~~Ar~~~p~a~l~~ndy 192 (364)
T d1us3a2 113 DFLAALDTHITTIVDHYEAKGNLVSWDVVNEAIDDNSPANFRTTDSAFYVKSGNSSVYIERAFQTARAADPAVILYYNDY 192 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCBCSSSSCCBCCTTCHHHHHTTSCSHHHHHHHHHHHHHCTTSEEEEEES
T ss_pred HHHHHHHHHHHHHHHhhccCCceEEEEEecccccCCCCcccccccchHHHHhCCchHHHHHHHHHHHHhccccceeeccc
Confidence 5567788999999999996668999999999964211 11112 2378889999999999998887541
Q ss_pred --CCCCh---------hhhhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccC
Q 046395 333 --LGGEW---------SELLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWS 401 (535)
Q Consensus 333 --~g~~~---------~~~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg 401 (535)
..... ..+.......+.+.+..|.+.... +. ..++ ..+..+.. .+.++.|+|++
T Consensus 193 ~~~~~~~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~p------~~----~~i~----~~l~~~~~-~g~~I~iTEld 257 (364)
T d1us3a2 193 NIEQNNAKTTKMVDMVKDFQARSIPIDGVGFQMHVCMNYP------SI----ANIS----AAMKKVVD-LGLLVKITELD 257 (364)
T ss_dssp STTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCS------CH----HHHH----HHHHHHHT-TTCEEEEEEEE
T ss_pred cccccchhhhHHHHHHHHHHhCCCccccceeeeeccCCCC------CH----HHHH----HHHHHHHh-cCCeeEEEeee
Confidence 11111 111122234566777778774321 12 2222 22333443 35669999997
Q ss_pred CC
Q 046395 402 CE 403 (535)
Q Consensus 402 ~~ 403 (535)
..
T Consensus 258 i~ 259 (364)
T d1us3a2 258 VA 259 (364)
T ss_dssp EE
T ss_pred Ee
Confidence 53
|
| >d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Streptomyces lividans [TaxId: 1916]
Probab=98.66 E-value=3e-08 Score=97.46 Aligned_cols=212 Identities=18% Similarity=0.190 Sum_probs=122.9
Q ss_pred HcCCCEEEeC--CccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCC-hHH
Q 046395 191 QNGLNAVRIP--VGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWS-DSD 267 (535)
Q Consensus 191 ~~G~N~VRip--v~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~-~~~ 267 (535)
..-||.+=.. +- |..++|.++. | .++.+|+++++|+++||.|.--..-.+.....+ ..... +..
T Consensus 34 ~~~fn~~t~~n~~k-W~~~ep~~g~-~---~~~~~D~~v~~a~~~gi~v~gh~l~w~~~~p~w--------~~~~~~~~~ 100 (302)
T d1v0la_ 34 GREFNMVTAENEMK-IDATEPQRGQ-F---NFSSADRVYNWAVQNGKQVRGHTLAWHSQQPGW--------MQSLSGSAL 100 (302)
T ss_dssp HHHCSEEEESSTTS-HHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEECSSSCCHH--------HHTCCHHHH
T ss_pred HhhCCeeeecccCc-hhhhCCCCCc-C---ChHHHHHHHHHHHHCCCEEEEeccccchhcccc--------ccccCcHHH
Confidence 3347777432 22 5677888775 6 578999999999999999864221111100000 00011 456
Q ss_pred HHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC-----C---hHHHHHHHHHHHHHHHhcCCCcEEEEcC--CCCCC-
Q 046395 268 IQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL-----K---LDSLKTYYKAGYDTVRKYSSSAYVILSN--RLGGE- 336 (535)
Q Consensus 268 ~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~-----~---~~~~~~~~~~~~~aIR~~~p~~~ii~~~--~~g~~- 336 (535)
.+.+.++++.+++||++ .|..||++|||..... + .....+|++.+++++|+.+|+..+++.+ ..+..
T Consensus 101 ~~~~~~~i~~~~~ry~g--~i~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~i~~a~~~ar~~dP~a~l~~n~~~~~~~~~ 178 (302)
T d1v0la_ 101 RQAMIDHINGVMAHYKG--KIVQWDVVNEAFADGSSGARRDSNLQRSGNDWIEVAFRTARAADPSAKLCYNDYNVENWTW 178 (302)
T ss_dssp HHHHHHHHHHHHHHTTT--TCSEEEEEECCBCSSSSCCBCCSHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCSTTS
T ss_pred HHHHHHHHHHHHhhcCC--CceEEEEecccccCCCCccccCcccccchHHHHHHHHHHHHHhCCCCEEeecCcccccCCh
Confidence 77888999999999999 6888999999964211 1 1223468899999999999999988854 12111
Q ss_pred --hhhhh-------cccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCC
Q 046395 337 --WSELL-------SFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAE 407 (535)
Q Consensus 337 --~~~~~-------~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~ 407 (535)
...+. .-....+.+-+..|++... .+.++.. ..+..+.. .+.|++|+|++...
T Consensus 179 ~~~~~~~~~v~~l~~~g~~idgiG~Q~H~~~~~------p~~~~~~--------~~l~~~~~-~glpi~iTE~d~~~--- 240 (302)
T d1v0la_ 179 AKTQAMYNMVRDFKQRGVPIDCVGFQSHFNSGS------PYNSNFR--------TTLQNFAA-LGVDVAITELDIQG--- 240 (302)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCEEEECCEEBTTB------CCCTTHH--------HHHHHHHT-TTCEEEEEEEEETT---
T ss_pred HHHHHHHHHHHHHHhCCCCccceEEeeccCCCC------CCHHHHH--------HHHHHHHh-cCCceEEeeccCCC---
Confidence 11111 1112344555555544221 1122211 12333433 35669999997542
Q ss_pred CCCHHHHHHHHHHHHHHHhh-CCcceEEEeeee
Q 046395 408 GASKRDYQRFAEAQLDVYGR-ATFGWAYWAYKF 439 (535)
Q Consensus 408 ~~~~~~~~~~~~~ql~~~~~-~~~Gw~~W~~k~ 439 (535)
.....+.+++... ++. ...|-++|.+..
T Consensus 241 -~qa~~~~~~~~~~---~s~~~v~gi~~Wg~~D 269 (302)
T d1v0la_ 241 -APASTYANVTNDC---LAVSRCLGITVWGVRD 269 (302)
T ss_dssp -CCHHHHHHHHHHH---HTCTTEEEEEESCSBG
T ss_pred -CCHHHHHHHHHHH---HhhhCCeEEEECCCcc
Confidence 2344555665443 332 224666787654
|
| >d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Ixt6 [TaxId: 1422]
Probab=98.65 E-value=1.3e-07 Score=93.87 Aligned_cols=127 Identities=15% Similarity=0.136 Sum_probs=87.0
Q ss_pred CCCEEEeCC-ccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCC-CCCCCCCCCCCCCCCCCCCCC-hH
Q 046395 193 GLNAVRIPV-GWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHA-LRVSQNGSPHSGSRDGFQEWS-DS 266 (535)
Q Consensus 193 G~N~VRipv-~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~-~pg~~ng~~~sg~~~~~~~W~-~~ 266 (535)
-||.+-..= .-|..++|.+|. | .++.+|++|++|+++||.|. |-+|. .|. |.... .....+. ++
T Consensus 36 ~fn~~t~~n~~kW~~iep~~g~-~---~~~~~D~~v~~a~~~gi~v~gh~lvw~~~~P~----W~~~~--~~~~~~~~~~ 105 (330)
T d1n82a_ 36 HVNSITAENHMKFEHLQPEEGK-F---TFQEADRIVDFACSHRMAVRGHTLVWHNQTPD----WVFQD--GQGHFVSRDV 105 (330)
T ss_dssp HCSEEEESSTTSHHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEEEEEESSSCCG----GGGBC--SSSSBCCHHH
T ss_pred hcCccccccCCChHhhcCCCCc-c---ChHHHHHHHHHHHHCCCEEEEeecccCCCCCc----hhccC--CcCCcCCHHH
Confidence 477776641 235778888875 6 67889999999999999985 33443 232 11000 0011122 45
Q ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC------C-hH--HHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 267 DIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL------K-LD--SLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 267 ~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~------~-~~--~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
..+.+.++++.+++||++ .|..||++|||..... . .. ....+++.++.++|+.+|+..+++.+
T Consensus 106 ~~~~~~~~i~~v~~ry~g--~v~~WdV~NEp~~~~~~~~~~~~~~~~~~~~~~~~~af~~ar~~~P~a~l~~n~ 177 (330)
T d1n82a_ 106 LLERMKCHISTVVRRYKG--KIYCWDVINEAVADEGDELLRPSKWRQIIGDDFMEQAFLYAYEADPDALLFYND 177 (330)
T ss_dssp HHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCSSSSCSBCCCHHHHHHCTTHHHHHHHHHHHHCTTSEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCC--CceeEEEeccccccCccccccCChhhhccChHHHHHHHHHHHHhCCcceEeecc
Confidence 667889999999999998 6889999999964211 1 11 11367899999999999999988754
|
| >d1i1wa_ c.1.8.3 (A:) Xylanase A, catalytic core {Thermoascus aurantiacus [TaxId: 5087]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Thermoascus aurantiacus [TaxId: 5087]
Probab=98.60 E-value=2.7e-07 Score=90.57 Aligned_cols=193 Identities=19% Similarity=0.315 Sum_probs=118.2
Q ss_pred ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCCCCCCCCCCCCCCCCCCCCCC-----C-hHHHHHHHHH
Q 046395 204 WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHALRVSQNGSPHSGSRDGFQEW-----S-DSDIQETVAI 274 (535)
Q Consensus 204 w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~~pg~~ng~~~sg~~~~~~~W-----~-~~~~~~~~~~ 274 (535)
|..++|.+|. | .++.+|+++++|+++||.|. |-+|.. .+.| . ++..+...++
T Consensus 51 W~~~ep~~G~-~---~~~~~D~~v~~a~~~gi~vrGH~lvW~~~---------------~P~W~~~~~~~~~~~~~~~~~ 111 (303)
T d1i1wa_ 51 WDATEPSQGN-F---NFAGADYLVNWAQQNGKLIRGHTLVWHSQ---------------LPSWVSSITDKNTLTNVMKNH 111 (303)
T ss_dssp HHHHCSBTTB-C---CCHHHHHHHHHHHHHTCEEEEEEEECSTT---------------CCHHHHTCCCHHHHHHHHHHH
T ss_pred chhhcCCCCc-c---ChHHHHHHHHHHHHCCCEEEEeeeeecCc---------------CchhhhcccccHHHHHHHHHH
Confidence 5677888775 6 67999999999999999974 333321 1111 1 3455677889
Q ss_pred HHHHHHHhCCCCcEEEEEeecCCCCCCC----C-h-HHH-HHHHHHHHHHHHhcCCCcEEEEcC--CCCCC---hhhh--
Q 046395 275 IDFLASRYADHPSLVAIELMNEPKAPDL----K-L-DSL-KTYYKAGYDTVRKYSSSAYVILSN--RLGGE---WSEL-- 340 (535)
Q Consensus 275 ~~~la~ry~~~p~V~~~el~NEP~~~~~----~-~-~~~-~~~~~~~~~aIR~~~p~~~ii~~~--~~g~~---~~~~-- 340 (535)
++.+++||++ .|..|+++|||..... + . +.+ .+|++.+++.+|+++|+..+++.+ ..+.. ...+
T Consensus 112 i~~v~~rY~g--~i~~WdVvNE~~~~~~~~r~~~~~~~~g~d~i~~af~~Ar~~dP~a~L~~Ndy~~~~~~~~k~~~~~~ 189 (303)
T d1i1wa_ 112 ITTLMTRYKG--KIRAWDVVNEAFNEDGSLRQTVFLNVIGEDYIPIAFQTARAADPNAKLYINDYNLDSASYPKTQAIVN 189 (303)
T ss_dssp HHHHHHHTTT--SCSEEEEEESCBCTTSSBCCCHHHHHTCTTHHHHHHHHHHHHCTTSEEEEEESSCCCSSSHHHHHHHH
T ss_pred HHHHHHHcCC--CCchhhhcccccCCCcccccCchhhcccHHHHHHHHHHHHHhCCCCEEEeecCcccCCcHHHHHHHHH
Confidence 9999999998 6889999999975321 1 1 111 357899999999999999988854 11111 1111
Q ss_pred -----hcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHH
Q 046395 341 -----LSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQ 415 (535)
Q Consensus 341 -----~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~ 415 (535)
..-...-+.+-+..|+-.. .... +. +.+..+...+++++.|+|+... ......|.
T Consensus 190 ~v~~l~~~g~~iDgiG~Q~H~~~~--------~~~~----~~----~~~~~~~~~g~~~i~iTElDi~----~~qa~~y~ 249 (303)
T d1i1wa_ 190 RVKKWRAAGVPIDGIGSQTHLSAG--------QGAS----VL----QALPLLASAGTPEVAITELDVA----GASSTDYV 249 (303)
T ss_dssp HHHHHHHTTCCCCEEEECCEECTT--------THHH----HH----HHHHHHHTTCCSEEEEEEEEET----TCCHHHHH
T ss_pred HHHHHHhCCCCccceEeeeccCCC--------CcHH----HH----HHHHHHHHcCCCceeecccccc----cccHHHHH
Confidence 1111233444444553221 1111 11 1233444556777999999643 23456677
Q ss_pred HHHHHHHHHHhhCCcceEEEeeee
Q 046395 416 RFAEAQLDVYGRATFGWAYWAYKF 439 (535)
Q Consensus 416 ~~~~~ql~~~~~~~~Gw~~W~~k~ 439 (535)
++++..++. ....|.++|.+..
T Consensus 250 ~~~~~~~~~--p~v~git~Wg~~D 271 (303)
T d1i1wa_ 250 NVVNACLNV--SSCVGITVWGVAD 271 (303)
T ss_dssp HHHHHHHHC--TTEEEEEESCSBG
T ss_pred HHHHHHhcc--CCceEEEEeCCcc
Confidence 777654331 1335777887754
|
| >d2je8a5 c.1.8.3 (A:331-678) Five-domain beta-mannosidase, domain 3 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Five-domain beta-mannosidase, domain 3 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.57 E-value=7.9e-08 Score=94.87 Aligned_cols=120 Identities=18% Similarity=0.151 Sum_probs=83.9
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++||++||++|+|+||+.-+ ..+ + . +.++++|.++||.|+.++.... .. ..
T Consensus 48 ~~di~l~ke~G~N~IR~~~~----~~~-p-~----------~~f~d~cD~~GilV~~e~~~~~---~~----------~~ 98 (348)
T d2je8a5 48 QTLFRDMKEANMNMVRIWGG----GTY-E-N----------NLFYDLADENGILVWQDFMFAC---TP----------YP 98 (348)
T ss_dssp HHHHHHHHHTTCCEEEECTT----SCC-C-C----------HHHHHHHHHHTCEEEEECSCBS---SC----------CC
T ss_pred HHHHHHHHHcCCCEEecCCC----CCC-C-C----------HHHHHHHHHCCCEEEeccchhc---cC----------CC
Confidence 69999999999999999321 011 1 1 3468999999999999986421 00 01
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCC--------CCChHHHHH--------HHHHHHHHHHhcCCCcE
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAP--------DLKLDSLKT--------YYKAGYDTVRKYSSSAY 326 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~--------~~~~~~~~~--------~~~~~~~aIR~~~p~~~ 326 (535)
..+...+.+.+-++.+.+|+++||+|++|.+.||+... ......... +.......+++.++..+
T Consensus 99 ~~~~~~~~~~~~~~~~I~r~rNHPSIi~W~~gnE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (348)
T d2je8a5 99 SDPTFLKRVEAEAVYNIRRLRNHASLAMWCGNNEILEALKYWGFEKKFTPEVYQGLMHGYDKLFRELLPSTVKEFDSDRF 178 (348)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCTTEEEEESCBSHHHHHHHSCTTTTSCHHHHHHHHHHHHHHHTTHHHHHHHHHCTTSE
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCeEEEEeccCccccchhhccchhhhhHHHHHHHHHhhhhhHHHHHHHHHHHhCCCCc
Confidence 12578888999999999999999999999999997531 112222222 22234577788889888
Q ss_pred EEEcC
Q 046395 327 VILSN 331 (535)
Q Consensus 327 ii~~~ 331 (535)
+...+
T Consensus 179 ~~~~~ 183 (348)
T d2je8a5 179 YVHSS 183 (348)
T ss_dssp EESSB
T ss_pred eecCC
Confidence 76554
|
| >d1dfca4 b.42.5.1 (A:1383-1493) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.52 E-value=5.9e-08 Score=80.61 Aligned_cols=73 Identities=11% Similarity=0.097 Sum_probs=61.0
Q ss_pred ceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCCc
Q 046395 18 TQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPEP 97 (535)
Q Consensus 18 ~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e~ 97 (535)
..++||+ .+|||+|++..|. |++..+ ..+.|.|-..+.+.+.+|. ||+||+++. +|+|.|++++|...|-
T Consensus 39 g~y~lr~-~~gkyw~~~~dG~--l~~~~~-----~~~~F~le~~~~~~~~~~a-nGkYL~~~~-~G~L~A~~~~~~~~~l 108 (111)
T d1dfca4 39 GAYNIKD-STGKYWTVGSDSA--VTSSGD-----TPVDFFFEFCDYNKVAIKV-GGRYLKGDH-AGVLKASAETVDPASL 108 (111)
T ss_dssp TEEEEEC-TTSCBCEECSSCB--EESCCS-----SCCCBEEEEEETTEEEEEE-TTEEEEECG-GGBEEEEESSCCGGGC
T ss_pred CEEEEEc-CCCCEEEEcCCCc--EEeCCC-----CCCCEEEEEeCCCEEEEcc-CCeEEEeCC-CCeEEeCCCCCCccce
Confidence 4899998 7999999997764 655443 3477888888889999997 999999987 8899999999999988
Q ss_pred eEE
Q 046395 98 FQI 100 (535)
Q Consensus 98 f~~ 100 (535)
|++
T Consensus 109 wEy 111 (111)
T d1dfca4 109 WEY 111 (111)
T ss_dssp BBC
T ss_pred EeC
Confidence 863
|
| >d1r85a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Xt6 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Bacillus stearothermophilus, Xt6 [TaxId: 1422]
Probab=98.30 E-value=2.1e-06 Score=86.24 Aligned_cols=189 Identities=17% Similarity=0.204 Sum_probs=108.4
Q ss_pred HHHHHHcCCCEEEeCCc--cccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCCCCCCCCCCCCCCCCCCC
Q 046395 186 FKFMSQNGLNAVRIPVG--WWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHALRVSQNGSPHSGSRDGF 260 (535)
Q Consensus 186 ~~~ik~~G~N~VRipv~--~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~~pg~~ng~~~sg~~~~~ 260 (535)
.+.+++ -||.+- |-. -|..++|.+|. | .++..|++|++|+++||.|. |-+|. +.+........+.
T Consensus 37 ~~~~~~-~Fn~~t-~eN~mKW~~iep~~G~-~---n~~~aD~~v~~a~~ngi~vrGH~LvW~~----~~P~W~~~~~~~~ 106 (371)
T d1r85a_ 37 VQMLKR-HFNSIV-AENVMKPISIQPEEGK-F---NFEQADRIVKFAKANGMDIRFHTLVWHS----QVPQWFFLDKEGK 106 (371)
T ss_dssp HHHHHH-HCSEEE-ESSTTSHHHHCSBTTB-C---CCHHHHHHHHHHHHTTCEEEEECSCCST----TCCGGGGBCTTSS
T ss_pred HHHHHH-hcCeec-ccccCcchhhcCCCCc-c---CcHHHHHHHHHHHHCCCEEEEeEEEeec----ccccccccccccc
Confidence 334433 488884 421 25677888775 6 67899999999999999984 33342 1111100000011
Q ss_pred CC------CC-----hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCCh------HHH-HHHHHHHHHHHHhc-
Q 046395 261 QE------WS-----DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKL------DSL-KTYYKAGYDTVRKY- 321 (535)
Q Consensus 261 ~~------W~-----~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~------~~~-~~~~~~~~~aIR~~- 321 (535)
.. +. ++..+...++++.++.||++ .|..|+++|||....... ..+ .+|+..++..+|++
T Consensus 107 ~~~~~~~~~~~~~~~e~l~~~~~~~I~~v~~rY~g--~I~~WDVvNE~~~~~~~~r~~~~~~~~g~dyi~~af~~A~~~~ 184 (371)
T d1r85a_ 107 PMVNETDPVKREQNKQLLLKRLETHIKTIVERYKD--DIKYWDVVNEVVGDDGKLRNSPWYQIAGIDYIKVAFQAARKYG 184 (371)
T ss_dssp BGGGCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTT--TCCEEEEEESCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccccccccccccCHHHHHHHHHHHHHHHHHHcCC--CceEEEEEeecccCCCCcccCchhhccCcHHHHHHHHHHHHhc
Confidence 00 00 22345667899999999998 799999999997532110 112 46788999999987
Q ss_pred CCCcEEEEcCCCC--CC--hhh-------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhc
Q 046395 322 SSSAYVILSNRLG--GE--WSE-------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTS 390 (535)
Q Consensus 322 ~p~~~ii~~~~~g--~~--~~~-------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~ 390 (535)
+|+..+++-+ ++ .+ ... +..-..+-+.+-+..|+..... +. ..+. ..+..+...
T Consensus 185 ~p~~~L~~Nd-y~~~~~~k~~~~~~~v~~l~~~g~pidgIG~Q~H~~~~~~------~~----~~i~----~~l~~~a~~ 249 (371)
T d1r85a_ 185 GDNIKLYMND-YNTEVEPKRTALYNLVKQLKEEGVPIDGIGHQSHIQIGWP------SE----AEIE----KTINMFAAL 249 (371)
T ss_dssp CTTSEEEEEE-SCTTSTTHHHHHHHHHHHHHHTTCCCCEEEECCEECSSSS------CH----HHHH----HHHHHHHHT
T ss_pred CCcceeeecc-ccccccchhHHHHHHHHHHHHCCCCcceeeccccccCCCC------CH----HHHH----HHHHHHHHc
Confidence 5666666632 21 11 111 1222234567777778764321 12 2222 223334433
Q ss_pred CCCcEEEeccCC
Q 046395 391 DGPLSFVGEWSC 402 (535)
Q Consensus 391 ~~p~v~vGEfg~ 402 (535)
|.|+.|+|+-.
T Consensus 250 -Gl~i~ITElDV 260 (371)
T d1r85a_ 250 -GLDNQITELDV 260 (371)
T ss_dssp -TCEEEEEEEEE
T ss_pred -CCceEEeeeEe
Confidence 56699999953
|
| >d1ur1a_ c.1.8.3 (A:) Xylanase {Cellvibrio mixtus [TaxId: 39650]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase species: Cellvibrio mixtus [TaxId: 39650]
Probab=98.23 E-value=1.6e-05 Score=79.15 Aligned_cols=184 Identities=15% Similarity=0.159 Sum_probs=111.8
Q ss_pred HcCCCEEEeCC-ccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEE---EEecCCC-CCCCCCCCCCCCCCCCCCCC-
Q 046395 191 QNGLNAVRIPV-GWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKV---IVDLHAL-RVSQNGSPHSGSRDGFQEWS- 264 (535)
Q Consensus 191 ~~G~N~VRipv-~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~V---IldlH~~-pg~~ng~~~sg~~~~~~~W~- 264 (535)
..-||.+-.-- .=|..++|.+|. | .++..|++|++|+++||.| .|-+|.. |. |.... ..+. ...
T Consensus 33 ~~~Fn~~t~eN~~KW~~ie~~~G~-~---~~~~~D~~v~~a~~~gi~vrGH~LvW~~~~P~----w~~~~-~~~~-~~~~ 102 (350)
T d1ur1a_ 33 AKEFNSITPENCMKWGVLRDAQGQ-W---NWKDADAFVAFGTKHNLHMVGHTLVWHSQIHD----EVFKN-ADGS-YISK 102 (350)
T ss_dssp HHHCSEEEESSTTSHHHHBCTTCC-B---CCHHHHHHHHHHHHTTCEEEEEEEECSSSSCG----GGTBC-TTSC-BCCH
T ss_pred HHHcCeecccccCchhhhcCCCCc-c---ChHHHHHHHHHHHHCCCEEEEEEEEEcccccc----ccccc-CCcc-ccCH
Confidence 34566664321 125677888775 6 5789999999999999987 4556642 21 11100 0011 112
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCCh------HHH-HHHHHHHHHHHHhcCCCcEEEEcCCCC---
Q 046395 265 DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKL------DSL-KTYYKAGYDTVRKYSSSAYVILSNRLG--- 334 (535)
Q Consensus 265 ~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~------~~~-~~~~~~~~~aIR~~~p~~~ii~~~~~g--- 334 (535)
++..+...++++.++.||++ .|..|++.|||....... ..+ ..|+..+..+.|+++|+..+++-+ |+
T Consensus 103 ~~l~~~~~~~I~~v~~ry~g--~i~~WDVvNE~~~~~~~~~~~~~~~~~G~~~i~~af~~Ar~~dP~akL~~Nd-yn~~~ 179 (350)
T d1ur1a_ 103 AALQKKMEEHITTLAGRYKG--KLAAWDVVNEAVGDDLKMRDSHWYKIMGDDFIYNAFTLANEVDPKAHLMYND-YNIER 179 (350)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCTTSSBCCCHHHHHHTTHHHHHHHHHHHHHCTTSEEEEEE-SSTTS
T ss_pred HHHHHHHHHHHHHHHHhcCC--cceEEEEecccccCCCCcccchhhhhcCcHHHHHHHHHHHhhCCCceEeecc-ccccc
Confidence 34567778999999999988 688999999997532110 112 457889999999999999888843 22
Q ss_pred -CChhh-------hhcccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCC
Q 046395 335 -GEWSE-------LLSFASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSC 402 (535)
Q Consensus 335 -~~~~~-------~~~~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~ 402 (535)
..... +..-..+-+.+-+..|+..... +. +.+.. .|..+.. .+.++.|+|+..
T Consensus 180 ~~k~~~~~~lv~~l~~~GvpiDgIGlQ~H~~~~~~------~~----~~i~~----~l~~~~~-lg~~i~iTElDv 240 (350)
T d1ur1a_ 180 TGKREATVEMIERLQKRGMPIHGLGIQGHLGIDTP------PI----AEIEK----SIIAFAK-LGLRVHFTSLDV 240 (350)
T ss_dssp TTHHHHHHHHHHHHHHTTCCCCEEEECCEEESSCS------CH----HHHHH----HHHHHHT-TTCEEEEEEEEE
T ss_pred ccccHHHHHHHHHHHhCCCCceEEEEeeeccCCCC------CH----HHHHH----HHHHHHh-cCCceeecccce
Confidence 10111 1122244567777889764321 12 22222 2333443 356799999854
|
| >d1vema2 c.1.8.1 (A:1-417) Bacterial beta-amylase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial beta-amylase species: Bacillus cereus [TaxId: 1396]
Probab=98.16 E-value=5.1e-07 Score=90.32 Aligned_cols=59 Identities=22% Similarity=0.380 Sum_probs=52.0
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCC-CCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPK-PPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~-~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg 246 (535)
++|++.||++|++.|+++|- |..++|. |+. | .|+.+|++++.++++||+ ||+.+|.+.|
T Consensus 32 ~~~L~~LK~aGV~gV~vdVw-WGivE~~~Pg~-Y---dws~yd~l~~mv~~~GLKi~vvmsfH~cGg 93 (417)
T d1vema2 32 ENDLRWAKQNGFYAITVDFW-WGDMEKNGDQQ-F---DFSYAQRFAQSVKNAGMKMIPIISTHQCGG 93 (417)
T ss_dssp HHHHHHHHHTTEEEEEEEEE-HHHHTCSSTTC-C---CCHHHHHHHHHHHHTTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEeee-eeeeecCCCCc-c---CcHHHHHHHHHHHHcCCeEEEEEEecccCC
Confidence 89999999999999999995 8999996 554 8 789999999999999987 5888897644
|
| >d1qw9a2 c.1.8.3 (A:18-384) Alpha-L-arabinofuranosidase, catalytic domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Alpha-L-arabinofuranosidase, catalytic domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.16 E-value=4.1e-05 Score=76.31 Aligned_cols=157 Identities=16% Similarity=0.244 Sum_probs=97.5
Q ss_pred HHHHHHHHHcCCCEEEeCCcc------c-cccCCC---CCC---CC--ccchHHHHHHHHHHHHHcCCEEEEecCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGW------W-IAYDPK---PPK---PF--VGGSLQALDNAFRWAQKYGMKVIVDLHALRVS 247 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~------w-~~~~p~---~~~---~~--~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~ 247 (535)
.+-++.||+++...||.|=+- | ..+.|. |+. .+ .+..-=-+|+.+++|++.|..++|.+....
T Consensus 37 ~dv~~~l~~l~~~~lR~PGG~~~~~y~W~~~iGp~~~Rp~~~~~~w~~~~~~~~G~~Ef~~~~~~~gaep~~~vn~g~-- 114 (367)
T d1qw9a2 37 QDVIELVKELQVPIIRYPGGNFVSGYNWEDGVGPKEQRPRRLDLAWKSVETNEIGLNEFMDWAKMVGAEVNMAVNLGT-- 114 (367)
T ss_dssp HHHHHHHHHHTCCEEEESCSGGGGGCCGGGGSSCGGGCCCEEETTTTEEECCSSCHHHHHHHHHHHTCEEEEEECCSS--
T ss_pred HHHHHHHHhcCCCEEeeCCccccCccccccccCChHHCCCccCCCCCCcCcCCCCHHHHHHHHHHhCCeEEEEEeCCC--
Confidence 577889999999999998752 2 122221 110 01 111112479999999999999999887421
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHH--------H-HHhC-CCC---cEEEEEeecCCCCC----CCChHHHHHH
Q 046395 248 QNGSPHSGSRDGFQEWSDSDIQETVAIIDFL--------A-SRYA-DHP---SLVAIELMNEPKAP----DLKLDSLKTY 310 (535)
Q Consensus 248 ~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~l--------a-~ry~-~~p---~V~~~el~NEP~~~----~~~~~~~~~~ 310 (535)
...+.+.+.++.+ + .|-+ ++| .|..|||-||+... ..+...+...
T Consensus 115 ------------------~~~~~a~d~vey~n~~~~t~~~~~R~~~G~~~P~~v~yweIGNE~~g~~~~g~~~~~~Y~~~ 176 (367)
T d1qw9a2 115 ------------------RGIDAARNLVEYCNHPSGSYYSDLRIAHGYKEPHKIKTWCLGNAMDGPWQIGHKTAVEYGRI 176 (367)
T ss_dssp ------------------CCHHHHHHHHHHHHCCSSSHHHHHHHHTTCCSCCCCCEEEESSCCCSTTSTTCCCHHHHHHH
T ss_pred ------------------ccHHHHHHHHHHHccCCCCHHHHHHHHcCCCCCCCceEEEeccccccccccCCCCHHHHHHH
Confidence 1233333333332 1 1211 233 69999999998753 2356788899
Q ss_pred HHHHHHHHHhcCCCcEEEEcCCCCC------Chhhh-hcccCCCCcEEEEEeecCcC
Q 046395 311 YKAGYDTVRKYSSSAYVILSNRLGG------EWSEL-LSFASNLSRVVIDVHFYNLF 360 (535)
Q Consensus 311 ~~~~~~aIR~~~p~~~ii~~~~~g~------~~~~~-~~~~~~~~n~v~d~H~Y~~~ 360 (535)
+++.++++|+.+|+..++.++.-.. .|... ++- ....-..+++|+|...
T Consensus 177 ~~~f~~amk~~dP~i~lia~g~~~~~~~~~~~w~~~vl~~-~~~~iD~is~H~Y~~~ 232 (367)
T d1qw9a2 177 ACEAAKVMKWVDPTIELVVCGSSNRNMPTFAEWEATVLDH-TYDHVDYISLHQYYGN 232 (367)
T ss_dssp HHHHHHHHHHHCTTCEEEECCCSCTTSTTTTHHHHHHHHH-HGGGCSEEEEEEEECC
T ss_pred HHHHHHHHhhcCCCeeEEEEeCCCCCCcccchHHHHHHhh-ccccCCcccccCCCCC
Confidence 9999999999999987776542211 12222 221 2234468899999643
|
| >d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glycosyl hydrolase family 5 xylanase, catalytic domain species: Erwinia chrysanthemi [TaxId: 556]
Probab=98.08 E-value=9.7e-05 Score=70.79 Aligned_cols=209 Identities=16% Similarity=0.126 Sum_probs=116.3
Q ss_pred HcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHH
Q 046395 191 QNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQE 270 (535)
Q Consensus 191 ~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~ 270 (535)
.+|++.+|+||.. . ...+...-.+++.|.++|++++..--..|+-... .+...+...-.+++.+.
T Consensus 31 g~g~s~~R~~id~------~------~~~~~~~i~~~k~A~~~~~ki~~spWSpP~wMK~---n~~~~~gg~L~~~~~~~ 95 (277)
T d1nofa2 31 QIGLSIMRVRIDP------D------SSKWNIQLPSARQAVSLGAKIMATPWSPPAYMKS---NNSLINGGRLLPANYSA 95 (277)
T ss_dssp CCCCCEEEEECCS------S------GGGGGGGHHHHHHHHHTTCEEEEECSCCCGGGBT---TSSSBSCCBBCGGGHHH
T ss_pred CCcceEEEeeeCC------C------cchhhHhhHHHHHHHHcCCcEEEcCCCCcHHHcC---CCCcccCCccCHHHHHH
Confidence 4899999999942 1 1122334567778899999988777777763211 01111111112578888
Q ss_pred HHHHHHHHHHHhCCCC-cEEEEEeecCCCCCC------CChHHHHHHHHHHHHHHHhcCCCcEEEEcCCCCCC---hhhh
Q 046395 271 TVAIIDFLASRYADHP-SLVAIELMNEPKAPD------LKLDSLKTYYKAGYDTVRKYSSSAYVILSNRLGGE---WSEL 340 (535)
Q Consensus 271 ~~~~~~~la~ry~~~p-~V~~~el~NEP~~~~------~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~~~g~~---~~~~ 340 (535)
+.+++...++.|+.+. .|-++.+.|||.... .+.+..+++++.... +. .+..|+.....+.+ ...+
T Consensus 96 ~A~Yl~~~i~~y~~~Gi~i~~is~qNEP~~~~~~~s~~~~~~~~~~~i~~~~~---~~-~~~ki~~~d~~~~~~~~~~~~ 171 (277)
T d1nofa2 96 YTSHLLDFSKYMQTNGAPLYAISIQNEPDWKPDYESCEWSGDEFKSYLKSQGS---KF-GSLKVIVAESLGFNPALTDPV 171 (277)
T ss_dssp HHHHHHHHHHHHHHTTCCCSEEESCSCTTCCCSSBCCBCCHHHHHHHHHHHGG---GG-TTSEEEEEEETTCCGGGTHHH
T ss_pred HHHHHHHHHHHHHHcCCCeeEEeecCCCCCCCCCCCcccCHHHHHHHHHHhhh---cc-cccceEeehhcCCcHHHhHHH
Confidence 8888888888887654 577889999998642 234667777655432 22 23344443321111 1222
Q ss_pred hcc-cCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCcCCCCCCHHHHHHHHH
Q 046395 341 LSF-ASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEWEAEGASKRDYQRFAE 419 (535)
Q Consensus 341 ~~~-~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~~~~~~~~~~~~~~~~ 419 (535)
+.. .....-..+.+|.|..... . . . . .... +++++++|.+........+.+.-..+..
T Consensus 172 l~d~~a~~~v~~ia~H~Y~~~~~------~-~-~----------~--~~~~-~K~lw~TE~~~~~~~~~~~w~~a~~~a~ 230 (277)
T d1nofa2 172 LKDSDASKYVSIIGGHLYGTTPK------P-Y-P----------L--AQNA-GKQLWMTEHYVDSKQSANNWTSAIEVGT 230 (277)
T ss_dssp HTCHHHHTTCCEEEEECTTSCCC------C-C-H----------H--HHHT-TCEEEEEEECSCTTSCTTCHHHHHHHHH
T ss_pred hhChHHHHHHHHhhccCCCCCcc------c-c-h----------h--hhCC-CccceeEEeeccCCCCcccHHHHHHHHH
Confidence 221 1122335789999954211 0 0 0 0 0112 4569999986543222233444455555
Q ss_pred HHHHHHhhCCcceEEEeeee
Q 046395 420 AQLDVYGRATFGWAYWAYKF 439 (535)
Q Consensus 420 ~ql~~~~~~~~Gw~~W~~k~ 439 (535)
.....+..+.-+|.+|....
T Consensus 231 ~i~~~l~~~~~a~~~W~~~~ 250 (277)
T d1nofa2 231 ELNASMVSNYSAYVWWYIRR 250 (277)
T ss_dssp HHHHHHHTTEEEEEEEESBS
T ss_pred HHHHHHHcCCeeEEEcCCcC
Confidence 55555655556899996433
|
| >d1w32a_ c.1.8.3 (A:) Xylanase A, catalytic core {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Xylanase A, catalytic core species: Pseudomonas fluorescens [TaxId: 294]
Probab=97.96 E-value=5.3e-05 Score=75.09 Aligned_cols=150 Identities=17% Similarity=0.164 Sum_probs=93.3
Q ss_pred cCCCEEEeCCcc--ccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEE---EecCCCCCCCCCCCCCCCCCCCCCCChH
Q 046395 192 NGLNAVRIPVGW--WIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVI---VDLHALRVSQNGSPHSGSRDGFQEWSDS 266 (535)
Q Consensus 192 ~G~N~VRipv~~--w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VI---ldlH~~pg~~ng~~~sg~~~~~~~W~~~ 266 (535)
.-||.|- |-.- |..++|. + .| .+...|+++++|+++||.|. |-+|. ..+....... . .++
T Consensus 35 ~~Fn~~t-~eN~~Kw~~~~~~-g-~~---n~~~~D~~v~~a~~ng~~vrGH~LvW~~--~~~~P~w~~~----~---~~~ 99 (346)
T d1w32a_ 35 AEFNQIT-AENIMKMSYMYSG-S-NF---SFTNSDRLVSWAAQNGQTVHGHALVWHP--SYQLPNWASD----S---NAN 99 (346)
T ss_dssp HHCSEEE-ESSTTSGGGGEET-T-EE---CCHHHHHHHHHHHHTTCEEEEEEEECCC--GGGCCTTCST----T---CTT
T ss_pred HhCCeec-ccccCCceeecCC-C-CC---CchHHHHHHHHHHHCCCEEEEEeeecCC--cccCcccccC----C---cHH
Confidence 3455554 3211 3455553 3 25 57889999999999999985 44452 1121111111 0 035
Q ss_pred HHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCC-------------ChHHH-----HHHHHHHHHHHHhcCCCcEEE
Q 046395 267 DIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDL-------------KLDSL-----KTYYKAGYDTVRKYSSSAYVI 328 (535)
Q Consensus 267 ~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~-------------~~~~~-----~~~~~~~~~aIR~~~p~~~ii 328 (535)
..+...++++.++.||++ .|-.|++.|||..... ...-+ ..|++.+++..|+++|+..++
T Consensus 100 ~~~~~~~~I~~v~~ry~g--~i~~WDVvNE~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~yi~~aF~~Ar~~dP~a~L~ 177 (346)
T d1w32a_ 100 FRQDFARHIDTVAAHFAG--QVKSWDVVNEALFDSADDPDGRGSANGYRQSVFYRQFGGPEYIDEAFRRARAADPTAELY 177 (346)
T ss_dssp HHHHHHHHHHHHHHHTTT--TCSEEEEEECCBCCGGGCTTCCCEETTEECCHHHHHHTSTHHHHHHHHHHHHHCTTSEEE
T ss_pred HHHHHHHHHHHHHHhhCC--cceEEEEEeeeccccccCccccccccccccchhhhhccChHHHHHHHHHHHHhCCCCEEE
Confidence 677888999999999998 6889999999975311 00111 268899999999999999888
Q ss_pred EcCC--CCCC--hhhh-------hcccCCCCcEEEEEeecC
Q 046395 329 LSNR--LGGE--WSEL-------LSFASNLSRVVIDVHFYN 358 (535)
Q Consensus 329 ~~~~--~g~~--~~~~-------~~~~~~~~n~v~d~H~Y~ 358 (535)
+-+- .... ...+ ..-..+-+.+-+..|...
T Consensus 178 ~Ndyn~~~~~~k~~~~~~lv~~L~~~g~pIDgIG~Q~H~~~ 218 (346)
T d1w32a_ 178 YNDFNTEENGAKTTALVNLVQRLLNNGVPIDGVGFQMHVMN 218 (346)
T ss_dssp EEESSTTSCSHHHHHHHHHHHHHHHTTCCCCEEEECCEEES
T ss_pred eccCCcccCcHHHHHHHHHHHHHHhcCCccceEEEEeeccC
Confidence 7531 1111 1111 122244677888888753
|
| >d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Glucosylceramidase, catalytic domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.28 E-value=0.0053 Score=60.23 Aligned_cols=234 Identities=15% Similarity=0.152 Sum_probs=120.9
Q ss_pred HcCCCEEEeCCccccc------cCCCCCC----CCc--cchHHHHHHHHHHHHHc---CCEEEEecCCCCCCCCCC-CCC
Q 046395 191 QNGLNAVRIPVGWWIA------YDPKPPK----PFV--GGSLQALDNAFRWAQKY---GMKVIVDLHALRVSQNGS-PHS 254 (535)
Q Consensus 191 ~~G~N~VRipv~~w~~------~~p~~~~----~~~--~~~l~~ld~~i~~a~~~---Gi~VIldlH~~pg~~ng~-~~s 254 (535)
-+|++.+|++|+-=.+ ....++. .+. ...-+....+++.|+++ +|+++..--..|+-.... ...
T Consensus 36 Glgls~~R~~IG~~d~~~~~yt~~d~~~d~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~l~i~aspWSpP~wMk~n~~~~ 115 (354)
T d2nt0a2 36 GIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLKTNGAVN 115 (354)
T ss_dssp TTCCCEEEEEESCCSSSSSCCCSCCSTTCTTCTTCCCCHHHHTTHHHHHHHHHHHCSSCCEEEEEESCCCGGGBTTCSSS
T ss_pred CceeEEEEEeecCCCCCCCCCcccCCCCCccccCCCcchhhhhhHHHHHHHHHHhcCCCeEEEEcCCCCchhhhcCCccc
Confidence 4999999999963110 0001111 111 11222233456666553 688888776777633111 111
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHhCCCC-cEEEEEeecCCCCC----------CCChHHHHHHHHH-HHHHHHhcC
Q 046395 255 GSRDGFQEWSDSDIQETVAIIDFLASRYADHP-SLVAIELMNEPKAP----------DLKLDSLKTYYKA-GYDTVRKYS 322 (535)
Q Consensus 255 g~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p-~V~~~el~NEP~~~----------~~~~~~~~~~~~~-~~~aIR~~~ 322 (535)
+.......-.+++.+.+.+++...++.|+.+. .|-++.+.|||... ..+.+...+++.+ +..++++..
T Consensus 116 ~~~~~~~~l~~~~~~~yA~Yl~~~v~~y~~~Gi~i~~isp~NEP~~~~~~~~~~~~~~~t~~~~~~fi~~~L~~~l~~~g 195 (354)
T d2nt0a2 116 GKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANST 195 (354)
T ss_dssp SSCBBSSCTTSHHHHHHHHHHHHHHHHHHHTTCCCSEEESCSSGGGGGSTTCCSSCCBCCHHHHHHHHHHTHHHHHHTST
T ss_pred CCCCcCCccchhHHHHHHHHHHHHHHHHHHcCCCceEeccCcCcCcccCCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 10000001114678888888888888887754 57778999999631 1246778888875 677888876
Q ss_pred CCcEE-EE-cCC-CC-CC-hhhhhc-ccCCCCcEEEEEeecCcCCCcccCCChhhhHHHHHHhhhHHHHHHh-hcCCCcE
Q 046395 323 SSAYV-IL-SNR-LG-GE-WSELLS-FASNLSRVVIDVHFYNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVT-TSDGPLS 395 (535)
Q Consensus 323 p~~~i-i~-~~~-~g-~~-~~~~~~-~~~~~~n~v~d~H~Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~-~~~~p~v 395 (535)
....+ +. .+. +. .. ...++. +.....-.++.+|.|..... ..... +..+. +..+.++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~v~~ia~H~Y~~~~~--------~~~~~--------~~~~~~~~p~k~~ 259 (354)
T d2nt0a2 196 HHNVRLLMLDDQRLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLA--------PAKAT--------LGETHRLFPNTML 259 (354)
T ss_dssp TTTSEEEEEEEEGGGTTHHHHHHHTSHHHHTTCCEEEEEEETTSCC--------CHHHH--------HHHHHHHCTTSEE
T ss_pred CCceEEEeeCCcccchHHHHHHHhcCHhHHHhcCeEEEecCCCCCC--------chhHH--------HHHHHHhCCCceE
Confidence 55433 33 221 11 11 112221 11122335799999964211 11111 11111 1224569
Q ss_pred EEeccCCC---cCCC--CCCHHHHHHHHHHHHHHHhhCCcceEEEeeeeC
Q 046395 396 FVGEWSCE---WEAE--GASKRDYQRFAEAQLDVYGRATFGWAYWAYKFA 440 (535)
Q Consensus 396 ~vGEfg~~---~~~~--~~~~~~~~~~~~~ql~~~~~~~~Gw~~W~~k~~ 440 (535)
+++|.++. ++.. ......-..+.+..+..+....-+|.+|.+-.+
T Consensus 260 w~TE~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~l~~~~~a~~~W~l~~d 309 (354)
T d2nt0a2 260 FASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALN 309 (354)
T ss_dssp EEEEEECCCSTTSCSCCTTCHHHHHHHHHHHHHHHHTTEEEEEEEESEEC
T ss_pred EeeeeccCCCCCCcccccCcHHHHHHHHHHHHHHHHhhhhhheehhhhcc
Confidence 99998653 1111 112333334555555555555569999986543
|
| >d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
Probab=97.14 E-value=0.0024 Score=61.59 Aligned_cols=106 Identities=13% Similarity=0.182 Sum_probs=71.2
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-+++||++|++.||| |..+ .+++++++..||+|+|.+.... ...
T Consensus 16 ~~Vv~llks~~i~~VRl---------------Y~~d-----~~vL~A~~~~gi~v~lGv~n~~--------------l~~ 61 (306)
T d1ghsa_ 16 SDVVQLYRSKGINGMRI---------------YFAD-----GQALSALRNSGIGLILDIGNDQ--------------LAN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---------------SSCC-----HHHHHHTTTSCCEEEEECCGGG--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE---------------eCCC-----HHHHHHHHhcCCEEEEEeccch--------------hhh
Confidence 56677889999999999 2222 1367788899999999775310 000
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCc
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
+ ....+.....++.....|.....|.++-+-||-... ....+...++.+..++++.+-..
T Consensus 62 ~-~~~~~~a~~~v~~~i~~~~~~~~I~~I~VGNEvl~~--~~~~l~~a~~~i~~al~~~gl~~ 121 (306)
T d1ghsa_ 62 I-AASTSNAASWVQNNVRPYYPAVNIKYIAAGNEVQGG--ATQSILPAMRNLNAALSAAGLGA 121 (306)
T ss_dssp H-HHCHHHHHHHHHHHTTTTTTTSEEEEEEEEESCCGG--GGGGHHHHHHHHHHHHHHHTCTT
T ss_pred h-ccCHHHHHHHHHHHHHhhCCCceEEEEEecceeccC--CcchhHHHHHHHHHHHHHCCCCC
Confidence 0 123445555555555567666679999999997642 33567778888888888876543
|
| >d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
Probab=97.06 E-value=0.0048 Score=59.56 Aligned_cols=107 Identities=14% Similarity=0.106 Sum_probs=69.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-+++||++|++.||| |+.+. ++++.++..||+|+|.+.... ...
T Consensus 16 ~~vv~lLk~~~i~~IRl---------------Y~~d~-----~vL~A~~~tgi~v~lGv~n~~--------------l~~ 61 (312)
T d2cyga1 16 SEVVSLYKSNNIARMRL---------------YDPNQ-----AALQALRNSNIQVLLDVPRSD--------------VQS 61 (312)
T ss_dssp HHHHHHHHHTTCCEEEE---------------SSCCH-----HHHHHHTTSCCEEEEEECHHH--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE---------------eCCCH-----HHHHHHHhcCCEEEEeeccch--------------hhh
Confidence 56688889999999999 22221 367788899999999774210 000
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCC
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSS 324 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~ 324 (535)
| ....+...+.++.....|.....|.++-+-||+.............+.....++++.+-.
T Consensus 62 ~-~~~~~~a~~wv~~~v~~~~~~~~I~~IaVGNE~l~~~~~~~~~lpa~~~~~~aL~~~g~~ 122 (312)
T d2cyga1 62 L-ASNPSAAGDWIRRNVVAYWPSVSFRYIAVGNELIPGSDLAQYILPAMRNIYNALSSAGLQ 122 (312)
T ss_dssp H-HHCTTHHHHHHHHHTGGGTTTSEEEEEEEEESCTTTSTTGGGHHHHHHHHHHHHHHTTCT
T ss_pred c-cCCHHHHHHHHHHHHhccCCCceEEEEEecCEEeeCCcCchhhcccHHHHHHHHHHCCCC
Confidence 0 012233445555555567666789999999999764433344445666778888887654
|
| >d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Plant beta-glucanases species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
Probab=96.82 E-value=0.0036 Score=60.33 Aligned_cols=105 Identities=12% Similarity=0.121 Sum_probs=68.9
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQE 262 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~ 262 (535)
++-+++||++|++.||| |+.+ .++++.++..||+|+|.+.... ...
T Consensus 16 ~~Vv~lLk~~~i~~IRl---------------Y~~d-----~~vL~A~~~~gi~v~lGv~n~~--------------l~~ 61 (306)
T d1aq0a_ 16 STVVSMFKSNGIKSMRL---------------YAPN-----QAALQAVGGTGINVVVGAPNDV--------------LSN 61 (306)
T ss_dssp HHHHHHHHHHTCCEEEE---------------SSCC-----HHHHHHHTTSCCEEEEEECGGG--------------HHH
T ss_pred HHHHHHHHhCCCCEEEE---------------eCCC-----HHHHHHHHhcCCEEEEeccchh--------------hhh
Confidence 56678899999999999 2222 1377888999999999875310 000
Q ss_pred CChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcCCCc
Q 046395 263 WSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYSSSA 325 (535)
Q Consensus 263 W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~ 325 (535)
+ ....+.....++...+.| ....|.++-+-||.... ....+...++.+..++++.+-+.
T Consensus 62 ~-~~~~~~~~~~v~~~v~~~-~~~~I~~i~VGNE~~~~--~~~~l~~a~~ni~~al~~~gl~~ 120 (306)
T d1aq0a_ 62 L-AASPAAAASWVKSNIQAY-PKVSFRYVCVGNEVAGG--ATRNLVPAMKNVHGALVAAGLGH 120 (306)
T ss_dssp H-HHCHHHHHHHHHHHTTTC-TTSEEEEEEEEESCCGG--GGGGHHHHHHHHHHHHHHTTCTT
T ss_pred c-cCCHHHHHHHHHHhcccc-CCceEEEEEeccEeecC--CccchhhHHHHHHHHHHHCCCCc
Confidence 0 123344455555555544 44578889999999742 23456667777888888776443
|
| >d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.74 E-value=0.008 Score=48.56 Aligned_cols=98 Identities=16% Similarity=0.276 Sum_probs=73.6
Q ss_pred eeEEEEeecCcEEEE-ecCCCceEEeccCCCCCCCCc-eeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEeccCCCCCC
Q 046395 19 QVQLISTKLKKYLTA-ENGSETILMANHNSSSTSSWQ-TFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSATEKFPE 96 (535)
Q Consensus 19 ~~~~~~~~~~~~~~a-~~~g~~~~~anr~~~~~~~we-~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~e 96 (535)
||.|+|+....|+-+ ++.+ ..|.++++.. =+=+ .|.|.. -++.|.|+++|++|+.- +|.|+. .|.+.-
T Consensus 1 Qvnl~Sv~rkrYahls~~~~-~ei~vD~~vP--WG~d~litL~f-~~grY~L~t~~~ryL~~---~G~Lv~---~~~~~t 70 (119)
T d1dfca2 1 QVNIYSVTRKRYAHLSARPA-DEIAVDRDVP--WGVDSLITLAF-QDQRYSVQTADHRFLRH---DGRLVA---RPEPAT 70 (119)
T ss_dssp EEEEEETTTCCEEEECSTTS-SSEEEEESSC--CTTTTCEEEEE-CSSSEEEEETTSCEECT---TSCEES---SCCGGG
T ss_pred CceEEcccceeEEEeCCCCC-CeEEEcCCCC--cccCcEEEEEE-cCCEEEEEeCCCCeECC---CCcCcc---cCCCCc
Confidence 789999999999965 3322 3889998877 3323 466666 57899999999999984 556764 556667
Q ss_pred ceEEEecCCCCceeEEEecCCceEEEecccEEe
Q 046395 97 PFQITRKNGEPHRVRFRASNGYFLQAKSEMQVT 129 (535)
Q Consensus 97 ~f~~~~~~~~~~~v~I~~~nG~flq~~~~~~v~ 129 (535)
-|.+.-.+ +.+.+++.+|.||...|.+-+.
T Consensus 71 ~Ftle~~~---G~vA~rD~~G~yL~p~G~~g~L 100 (119)
T d1dfca2 71 GYTLEFRS---GKVAFRDCEGRYLAPSGPSGTL 100 (119)
T ss_dssp CEEEEECS---SEEEEEESSSCBEEECSSSCCE
T ss_pred EEEEEEeC---CeEEEEcCCCCEEeccCCCceE
Confidence 78877764 4599999999999988764444
|
| >d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Endoglucanase H N-terminal domain species: Clostridium thermocellum [TaxId: 1515]
Probab=95.51 E-value=0.066 Score=50.14 Aligned_cols=165 Identities=9% Similarity=0.006 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHcCCEEEEecCCCCCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 220 LQALDNAFRWAQKYGMKVIVDLHALRVSQNGSPHSGSRDGFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 220 l~~ld~~i~~a~~~Gi~VIldlH~~pg~~ng~~~sg~~~~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
+..+...++.+...|..++|.++-..++ ......| ++-+...++.+.|.+ + +.| |+ +-+.+|+.+
T Consensus 41 ~~~~~~~~~~~~~~g~~~~it~~P~~~~-----~~~ia~G------~yD~~i~~~a~~l~~-~-g~p-v~-~R~~hE~ng 105 (273)
T d2v3ga1 41 FSWVRPYADAVYNNGSILMITWEPWEYN-----TVDIKNG------KADAYITRMAQDMKA-Y-GKE-IW-LRPLHEANG 105 (273)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECTTCC-----HHHHHTT------TTHHHHHHHHHHHHH-H-CSC-EE-EEESCCTTS
T ss_pred chhHHHHHHHHHhCCCeEEEEeCCCCCC-----HHHHhCc------chHHHHHHHHHHHHh-c-CCC-EE-EEecccCCC
Confidence 4667777888899999999988732100 0000001 223444444555544 3 445 43 899999986
Q ss_pred C-----------CCChHHHHHHHHHHHHHHHhcCCCcEEEEcC--C-CCCChhhhhcccCCC-CcEEEEEeecCcCCCcc
Q 046395 300 P-----------DLKLDSLKTYYKAGYDTVRKYSSSAYVILSN--R-LGGEWSELLSFASNL-SRVVIDVHFYNLFWDNF 364 (535)
Q Consensus 300 ~-----------~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~~--~-~g~~~~~~~~~~~~~-~n~v~d~H~Y~~~~~~~ 364 (535)
. ..+++.++..++.+++++|+.+.+.++++=+ . ...+...+...-.++ --.++.++.|+.....-
T Consensus 106 ~W~~W~~~~~~~~~~p~~y~~a~r~v~~~~r~~g~~nv~~vw~p~~~~~~~~~~~~~yYPGDdyVD~vG~d~Y~~~~~~~ 185 (273)
T d2v3ga1 106 DWYPWAIGYSSRVNTNETYIAAFRHIVDIFRANGATNVKWVFNVNCDNVGNGTSYLGHYPGDNYVDYTSIDGYNWGTTQS 185 (273)
T ss_dssp SSSTTSTTCTTCCCCHHHHHHHHHHHHHHHHHTTCTTEEEBCCEESSCCSTTCCSSTTCCCGGGCSBEEEEEEECTTCCT
T ss_pred CcccCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCChhhHHhhCCCCCEEEEEEEeccCCCCccc
Confidence 3 1256789999999999999987766655422 1 111222222222232 33478888886532210
Q ss_pred cCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCc
Q 046395 365 NKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEW 404 (535)
Q Consensus 365 ~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~ 404 (535)
.........+.+ ...+..+. ..++|++|+|||..-
T Consensus 186 ~~~~~~~~~~~~----~~~~~~~~-~~~KPi~i~E~G~~~ 220 (273)
T d2v3ga1 186 WGSQWQSFDQVF----SRAYQALA-SINKPIIIAEFASAE 220 (273)
T ss_dssp TTCCCCCHHHHH----HHHHHHHT-TSSSCEEEEEEEECS
T ss_pred chhhhhhHHHHH----HHHHHHHH-hCCCCEEEEeecCCC
Confidence 000111111111 11122233 335669999999754
|
| >d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp., ksm-k38 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp., ksm-k38 [TaxId: 1409]
Probab=95.49 E-value=0.0074 Score=58.27 Aligned_cols=64 Identities=23% Similarity=0.319 Sum_probs=42.3
Q ss_pred hhCccchHHHHHHHHHcCCCEEEe-CCcc---------ccc--cCCCCC---CCCc--cchHHHHHHHHHHHHHcCCEEE
Q 046395 176 HWKSYITEEDFKFMSQNGLNAVRI-PVGW---------WIA--YDPKPP---KPFV--GGSLQALDNAFRWAQKYGMKVI 238 (535)
Q Consensus 176 hw~~~ite~D~~~ik~~G~N~VRi-pv~~---------w~~--~~p~~~---~~~~--~~~l~~ld~~i~~a~~~Gi~VI 238 (535)
+|+. | .+-++.||++|+|+|-| ||.- |.. ..+... ...+ -+..+.++++|+.|.++||+||
T Consensus 21 ~~~~-i-~~kLdyLk~LGvt~I~l~Pi~~~~~~~~~gY~~~d~~~~~~~~~~~~vd~~~Gt~~efk~lV~~~H~~GI~Vi 98 (390)
T d1ud2a2 21 HWNR-L-HDDAAALSDAGITAIWIPPAYKGNSQADVGYGAYDLYDLGEFNQKGTVRTKYGTKAQLERAIGSLKSNDINVY 98 (390)
T ss_dssp HHHH-H-HHHHHHHHHHTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEE
T ss_pred CHHH-H-HHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCccCCcccccccccCCcCCCCCCHHHHHHHHHHHHhcCCceE
Confidence 4533 3 45589999999999998 4421 100 000000 0011 2468999999999999999999
Q ss_pred Eec
Q 046395 239 VDL 241 (535)
Q Consensus 239 ldl 241 (535)
||+
T Consensus 99 lDv 101 (390)
T d1ud2a2 99 GDV 101 (390)
T ss_dssp EEE
T ss_pred EEE
Confidence 999
|
| >d1j0ha3 c.1.8.1 (A:124-505) Neopullulanase, central domain {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Neopullulanase, central domain species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.41 E-value=0.1 Score=50.51 Aligned_cols=135 Identities=9% Similarity=0.150 Sum_probs=77.3
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCC-----ccchHHHHHHHHHHHHHcCCEEEEec---CCCCCC-------
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPF-----VGGSLQALDNAFRWAQKYGMKVIVDL---HALRVS------- 247 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~-----~~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~------- 247 (535)
+.++.|+++|+|+|=| ||.-...........| .-+..+.++++|+.|.++||+||+|+ |..+..
T Consensus 57 ~kldyl~~LGv~~i~L~Pi~~~~~~~gy~~~d~~~vd~~~Gt~~~~~~lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~~ 136 (382)
T d1j0ha3 57 DHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEKGIRVMLDAVFNHCGYEFAPFQDVW 136 (382)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTCHHHHHHH
T ss_pred HhHHHHHHcCCCEEEeCCCCcCCcccCCCcccccccCCCCCCHHHHHHHHHHhhhccceEEEEeeecccccccccchhhh
Confidence 4578999999999997 5521000000000000 01568999999999999999999998 332110
Q ss_pred -------CCCC--------CC--CCCCC------CC--CCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCC
Q 046395 248 -------QNGS--------PH--SGSRD------GF--QEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPD 301 (535)
Q Consensus 248 -------~ng~--------~~--sg~~~------~~--~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~ 301 (535)
...+ .. ..... +. ..+. ++.++..++.++...+.|+ |-||=+-.=++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~n~~vr~~l~~~~~~wi~~~g----iDGfR~Da~~~--- 209 (382)
T d1j0ha3 137 KNGESSKYKDWFHIHEFPLQTEPRPNYDTFAFVPQMPKLNTANPEVKRYLLDVATYWIREFD----IDGWRLDVANE--- 209 (382)
T ss_dssp HHGGGCTTGGGBCBSSSSCCCSSSCSBCBSTTCTTSBBBCTTSHHHHHHHHHHHHHHHHHHC----CCEEEETTGGG---
T ss_pred ccCCccccCCccccccccccccccccccccccCCCCcccccChHHHHHHHHHHHHhHhhhcc----ccEEEecchhh---
Confidence 0000 00 00000 00 1112 6677888888888887774 23444433222
Q ss_pred CChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 302 LKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 302 ~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
....+.++...++++..|+..++.
T Consensus 210 ----~~~~~~~~~~~~~~~~~p~~~~i~ 233 (382)
T d1j0ha3 210 ----IDHEFWREFRQEVKALKPDVYILG 233 (382)
T ss_dssp ----SCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred ----cchhhhhhhhhhhhccCCCccccc
Confidence 124566777788889999887543
|
| >d1ea9c3 c.1.8.1 (C:122-503) Maltogenic amylase, central domain {Bacillus sp., cyclomaltodextrinase [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Bacillus sp., cyclomaltodextrinase [TaxId: 1409]
Probab=95.40 E-value=0.15 Score=49.03 Aligned_cols=135 Identities=16% Similarity=0.260 Sum_probs=76.0
Q ss_pred HHHHHHHHcCCCEEEe-CCccccc----cCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCC-------
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIA----YDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRV------- 246 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~----~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg------- 246 (535)
+-++.||++|+|+|-| || +... ..+......+ -+..+.++++|+.|.++||+||+|+ |..+.
T Consensus 55 ~kLdylk~LGv~~i~l~Pi-~~~~~~~gY~~~~~~~id~~~Gt~~df~~lv~~~h~~gi~VilD~V~NH~s~~~~~~~~~ 133 (382)
T d1ea9c3 55 DHLDHLSKLGVNAVYFTPL-FKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDV 133 (382)
T ss_dssp HTHHHHHHHTCSEEEECCC-SSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHH
T ss_pred HhhHHHHhCCCCEEEeCCC-ccCCCCCCCCcccccccccccCCHHHHHHHHHHHHhhcceEEEeeecccccccCcchhhh
Confidence 4578999999999997 33 1100 0000000011 2578999999999999999999999 32210
Q ss_pred ---CC----CCCCCC-CC----CCC------------CC--CCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 247 ---SQ----NGSPHS-GS----RDG------------FQ--EWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 247 ---~~----ng~~~s-g~----~~~------------~~--~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
+. ..+.+. +. ..+ .. .|. ++.++...+.+....+.|+ |-||=+-.=.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~n~~~~~v~~~l~~~~~~w~~~~g----vDGfR~Da~~~- 208 (382)
T d1ea9c3 134 LKNGEKSKYKDWFHIRSLPLEVVDGIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETG----IDGWRLDVANE- 208 (382)
T ss_dssp HTTTTTCTTTTSSCBCSSSCCCTTSCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHC----CSEEEETTCTT-
T ss_pred hhcCCcccccccccccccccccccCcccccccccccccCccccccHHHHHHHHHHHhhccccee----eeEEEecchhh-
Confidence 00 000000 00 000 00 111 5667777788888777774 33443321111
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 300 PDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 300 ~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
.. ..+.+...+.+++..|+.+++..
T Consensus 209 --~~----~~~~~~~~~~~~~~~p~~~~~~e 233 (382)
T d1ea9c3 209 --VS----HQFWREFRRVVKQANPDAYILGE 233 (382)
T ss_dssp --SC----HHHHHHHHHHHHHHCTTCEEEEC
T ss_pred --Cc----hhhhhhhhhhhhhcCCCeeEEee
Confidence 12 34566677788889998876654
|
| >d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase {Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]
Probab=95.35 E-value=0.013 Score=56.90 Aligned_cols=60 Identities=20% Similarity=0.482 Sum_probs=43.2
Q ss_pred chHHHHHHHHHcCCCEEEeCCc--------cccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 181 ITEEDFKFMSQNGLNAVRIPVG--------WWIAYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 181 ite~D~~~ik~~G~N~VRipv~--------~w~~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
|.++-.+.||++|+++|=||=. ||...+|.... .++ +..+.|+++|+.|.++||+||||+
T Consensus 16 i~~~~~dyl~~lG~tai~l~P~~~~~~~~~~y~gY~~~dy~-vd~~~Gt~~dfk~LV~~aH~~GI~VilDv 85 (354)
T d1g94a2 16 VAQECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYE-LQSRGGNRAQFIDMVNRCSAAGVDIYVDT 85 (354)
T ss_dssp HHHHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSC-SCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCcCccCCCCCCCcccCCCCcce-eCCCCCCHHHHHHHHHHHhccCceeEEEe
Confidence 4445556799999999998432 23334443211 222 578999999999999999999999
|
| >d1wdpa1 c.1.8.1 (A:6-495) beta-Amylase {Soybean (Glycine max) [TaxId: 3847]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Soybean (Glycine max) [TaxId: 3847]
Probab=95.29 E-value=0.01 Score=59.04 Aligned_cols=60 Identities=23% Similarity=0.506 Sum_probs=51.5
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg 246 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..++++++.+++.||+ ||+.+|.+.|
T Consensus 31 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 92 (490)
T d1wdpa1 31 KEQLLQLRAAGVDGVMVDV-WWGIIELKGPKQY---DWRAYRSLLQLVQECGLTLQAIMSFHQCGG 92 (490)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSSTTCC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCcc---ChHHHHHHHHHHHHcCCeEEEEEeecccCC
Confidence 7899999999999999999 8888887655558 789999999999999998 5567787654
|
| >d1eh9a3 c.1.8.1 (A:91-490) Glycosyltrehalose trehalohydrolase, central domain {Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Archaeon Sulfolobus solfataricus, km1 [TaxId: 2287]
Probab=95.19 E-value=0.085 Score=51.27 Aligned_cols=58 Identities=22% Similarity=0.418 Sum_probs=40.3
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc-----ccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI-----AYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~-----~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+.|+.|+++|+|+|=| ||.--. ...+......++ +..+.|+++|+.|.++||+||||+
T Consensus 33 ~~ldyi~~LGv~~i~l~Pv~~~~~~~~~GY~~~d~~~vd~~~Gt~~dlk~lv~~~h~~gi~VilD~ 98 (400)
T d1eh9a3 33 RKLDYLKDLGITAIEIMPIAQFPGKRDWGYDGVYLYAVQNSYGGPEGFRKLVDEAHKKGLGVILDV 98 (400)
T ss_dssp HTHHHHHHHTCCEEEECCCBCCSSSCCCSTTCCCTTCBCSTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhHHHHHcCCCEEEeCCcCcCCCCCCCCCCCCCCCCcCcccCCHHHHHHHHHHHHhcCCceeeec
Confidence 5589999999999998 442100 001111000111 578999999999999999999999
|
| >d2bhua3 c.1.8.1 (A:111-530) Glycosyltrehalose trehalohydrolase, central domain {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Glycosyltrehalose trehalohydrolase, central domain species: Deinococcus radiodurans [TaxId: 1299]
Probab=95.12 E-value=0.039 Score=54.49 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=77.5
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCC-CC--C---c--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCCCCC
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPP-KP--F---V--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQNGS 251 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~-~~--~---~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~ng~ 251 (535)
+-++.||++|+|+|=| ||.-... ...-| .+ | + -+..+.|+++|+.|.++||+||+|+ |..+.+. .+
T Consensus 38 ~~ldyl~~LGv~~i~L~Pv~~~~~-~~~~GY~~~d~~~vdp~~G~~~d~~~lv~~aH~~gi~VilD~V~NH~~~~~~-~~ 115 (420)
T d2bhua3 38 EKLPYLKELGVTAIQVMPLAAFDG-QRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRLGLGVFLDVVYNHFGPSGN-YL 115 (420)
T ss_dssp HTHHHHHHHTCCEEEECCCEECSS-SCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECCSCCCSSSC-CH
T ss_pred HhHHHHHHcCCCEEEeCCCCcCCC-CCCCCCCcccCCCcCcccCCHHHHHHHHHHHHhccccccccccccccCCCCc-cc
Confidence 4589999999999997 4421110 00001 00 1 1 1578999999999999999999998 4332110 00
Q ss_pred CC---------CCCCC-CCCCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHh
Q 046395 252 PH---------SGSRD-GFQEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRK 320 (535)
Q Consensus 252 ~~---------sg~~~-~~~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~ 320 (535)
.. ..... ....|. ++.++.+++.++...+.|+ |-||=+---+.... +....+..++.+.+++
T Consensus 116 ~~~~~~~~~~~~~~~~~~dlN~~np~v~~~~~~~~~~Wl~~~G----VDGfR~D~~~~l~~---~~~~~~~~~~~~~~~~ 188 (420)
T d2bhua3 116 SSYAPSYFTDRFSSAWGMGLDYAEPHMRRYVTGNARMWLRDYH----FDGLRLDATPYMTD---DSETHILTELAQEIHE 188 (420)
T ss_dssp HHHCGGGEEEEEECSSSEEECTTSHHHHHHHHHHHHHHHHHHC----CSEEEETTGGGCCC---CSSSCHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccChHHHHHHHHHhheeeeccc----ccEEEEeeeeeecc---ccccccHHHHHHHHHh
Confidence 00 00000 001222 7788888888888776663 22232211111100 0112356677888999
Q ss_pred cCCCcEEEEc
Q 046395 321 YSSSAYVILS 330 (535)
Q Consensus 321 ~~p~~~ii~~ 330 (535)
.+|+.+++-+
T Consensus 189 ~~p~~~~i~E 198 (420)
T d2bhua3 189 LGGTHLLLAE 198 (420)
T ss_dssp TCSCCEEEEE
T ss_pred hcCCceeeec
Confidence 9998876653
|
| >d1h3ga3 c.1.8.1 (A:96-517) Cyclomaltodextrinase, central domain {Flavobacterium sp. 92 [TaxId: 197856]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclomaltodextrinase, central domain species: Flavobacterium sp. 92 [TaxId: 197856]
Probab=95.11 E-value=0.13 Score=50.44 Aligned_cols=57 Identities=18% Similarity=0.159 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCC--C-CC--C---c--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKP--P-KP--F---V--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~--~-~~--~---~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.||++|+|+|-| ||. ..-..+.. | .+ | + -+..+.|+++|+.|+++||+||+|+
T Consensus 57 ~kLdyl~~LGv~~I~l~Pi~-~~~~~~~~~~GY~~~d~~~vd~~~Gt~~df~~lv~~~H~~Gi~VilD~ 124 (422)
T d1h3ga3 57 DHLDYIAGLGFTQLWPTPLV-ENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDV 124 (422)
T ss_dssp HTHHHHHHHTCCEEEECCCE-ECCCSSCGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhHHHHHHCCCCEEEeCCcc-cCCCCCCCCCCCCccccCCcccccCCHHHHHHHHHHHHHhCccccccC
Confidence 4578999999999997 442 00000000 0 00 0 1 1468999999999999999999999
|
| >d1fa2a_ c.1.8.1 (A:) beta-Amylase {Sweet potato (Ipomoea batatas) [TaxId: 4120]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Sweet potato (Ipomoea batatas) [TaxId: 4120]
Probab=95.08 E-value=0.011 Score=58.85 Aligned_cols=60 Identities=28% Similarity=0.591 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg 246 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..++++++.+++.||+ ||+.+|.+.|
T Consensus 37 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 98 (498)
T d1fa2a_ 37 EDELKQVKAGGCDGVMVDV-WWGIIEAKGPKQY---DWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHHHTTCCEEEEEE-EHHHHTCSBTTBC---CCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHHHcCCcEEEEee-eeeEeecCCCCcc---CcHHHHHHHHHHHHcCCeeEEEEeecccCC
Confidence 6899999999999999999 8888887655558 789999999999999998 4577787643
|
| >d1m7xa3 c.1.8.1 (A:227-622) 1,4-alpha-glucan branching enzyme, central domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 1,4-alpha-glucan branching enzyme, central domain species: Escherichia coli [TaxId: 562]
Probab=95.06 E-value=0.01 Score=57.50 Aligned_cols=143 Identities=13% Similarity=0.104 Sum_probs=76.9
Q ss_pred hHHHHHHHHHcCCCEEEe-CCccccccCCCCC-CCC--------c--cchHHHHHHHHHHHHHcCCEEEEec---CCCCC
Q 046395 182 TEEDFKFMSQNGLNAVRI-PVGWWIAYDPKPP-KPF--------V--GGSLQALDNAFRWAQKYGMKVIVDL---HALRV 246 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~-~~~--------~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg 246 (535)
+++-++.|+++|+|+|-| ||.- .|... .-| + -+..+.|+++|+.|.++||+||||+ |..+.
T Consensus 43 ~~klidyl~~LGv~~iwl~Pi~~----~~~~~~hGY~~~d~~~vdp~~Gt~~d~~~LV~~aH~~gi~VilD~V~NH~~~~ 118 (396)
T d1m7xa3 43 ADQLVPYAKWMGFTHLELLPINE----HPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVILDWVPGHFPTD 118 (396)
T ss_dssp HHHHHHHHHHTTCSEEEESCCEE----CSCGGGTTSSCSEEEEECGGGSCHHHHHHHHHHHHHTTCEEEEEECTTSCCCS
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC----CCCCCCCCcCcCcCCCcCcccCCHHHHHHHHHHHhhhhhhhhhcccccccCCc
Confidence 345569999999999998 3310 11000 001 1 1468999999999999999999999 43221
Q ss_pred CCC-----CCCC---CCCCC------CC--CCCC-hHHHHHHHHHHHHHHHHhCCCCc-EE---------EE-----Eee
Q 046395 247 SQN-----GSPH---SGSRD------GF--QEWS-DSDIQETVAIIDFLASRYADHPS-LV---------AI-----ELM 294 (535)
Q Consensus 247 ~~n-----g~~~---sg~~~------~~--~~W~-~~~~~~~~~~~~~la~ry~~~p~-V~---------~~-----el~ 294 (535)
... .... ..... +. ..+. +..+....+.+......|+-+-- +- .+ .+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gvDG~R~D~~~~~~~~~~~~~~~~~~~ 198 (396)
T d1m7xa3 119 DFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIYRDYSRKEGEWIP 198 (396)
T ss_dssp TTSSTTGGGSCSSBCC-----------CCCBCTTSHHHHHHHHHHHHHHHHHSCCCEEEECCSHHHHCC-----------
T ss_pred ccccccccCCccccccCCCCCCCCCCCCccccCCCchhHHHHHHHHHHHHHHhCCcceeeechhhhccchhccccccccc
Confidence 100 0000 00000 00 1111 55666666666666666643210 00 00 011
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 295 NEPKAPDLKLDSLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 295 NEP~~~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
++.. .........+.+.....++...|...++..
T Consensus 199 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 232 (396)
T d1m7xa3 199 NEFG--GRENLEAIEFLRNTNRILGEQVSGAVTMAE 232 (396)
T ss_dssp ---C--TTCCHHHHHHHHHHHHHHHHSSTTCEEEEC
T ss_pred cccc--ccccchHHHHHHHHHHHHhhhCCCceEEEe
Confidence 1111 112234556788888999999999887764
|
| >d1b1ya_ c.1.8.1 (A:) beta-Amylase {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: beta-Amylase species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=95.03 E-value=0.013 Score=58.44 Aligned_cols=60 Identities=27% Similarity=0.549 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCE--EEEecCCCCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMK--VIVDLHALRV 246 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~--VIldlH~~pg 246 (535)
+..++.||++|+.-|=++| ||...+...+..| .|..++++++.+++.||+ ||+.+|.+.|
T Consensus 30 ~~~L~~LK~~GVdGVmvDv-WWGiVE~~~P~~Y---dWsgY~~l~~mvr~~GLKlq~vmSFHqCGG 91 (500)
T d1b1ya_ 30 RAQLRKLVEAGVDGVMVDV-WWGLVEGKGPKAY---DWSAYKQLFELVQKAGLKLQAIMSFHQCGG 91 (500)
T ss_dssp HHHHHHHHHTTCCEEEEEE-ETTTGGGGSTTCC---CCHHHHHHHHHHHHHTCEEEEEEECSCBSS
T ss_pred HHHHHHHHHcCCCEEEEee-eeeeeecCCCCcc---CcHHHHHHHHHHHHcCCeEEEEEeecccCC
Confidence 6899999999999999999 7888887644558 789999999999999998 5677787644
|
| >d1ht6a2 c.1.8.1 (A:1-347) Plant alpha-amylase {Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Plant alpha-amylase species: Barley (Hordeum vulgare), AMY1 isozyme [TaxId: 4513]
Probab=94.93 E-value=0.022 Score=54.22 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=40.4
Q ss_pred HHHHHHHHcCCCEEEe-CCccccc----cCCCCCCCCc---cchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIA----YDPKPPKPFV---GGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~----~~p~~~~~~~---~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
+-++.||++|+|+|-| |+. ... ..+......+ -+..+.++++|+.|.++||+||+|+-
T Consensus 25 ~kLdyl~~lGv~~i~L~Pi~-~~~~~~gY~~~d~~~id~~~~G~~~~f~~lv~~~H~~gi~VilD~V 90 (347)
T d1ht6a2 25 GKVDDIAAAGVTHVWLPPPS-HSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIV 90 (347)
T ss_dssp TTHHHHHHTTCCEEEECCCS-CBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhHHHHHHcCCCEEEECCCC-cCCCCCCCCccCcCcCCcccCCCHHHHHHHHHHHhhcceEEeeecc
Confidence 4489999999999998 332 110 1111100011 25789999999999999999999993
|
| >d1gcya2 c.1.8.1 (A:1-357) G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) {Pseudomonas stutzeri [TaxId: 316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) species: Pseudomonas stutzeri [TaxId: 316]
Probab=94.77 E-value=0.03 Score=53.77 Aligned_cols=58 Identities=22% Similarity=0.198 Sum_probs=41.8
Q ss_pred HHHHHHHHHcCCCEEEeCCcccccc--------------CCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAY--------------DPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~--------------~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|=|+-.+.... ++.... .+ -+..+.|+++|+.|.++||+||+|+
T Consensus 40 ~~kl~yl~~lGv~aIwl~P~~~~~~~~~~~~~~~~~hgY~~~dy~-vd~~~Gt~~df~~LV~~aH~~GI~VIlD~ 113 (357)
T d1gcya2 40 RQQAATIAADGFSAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFN-KNGRYGSDAQLRQAASALGGAGVKVLYDV 113 (357)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCCCCBC---CCBCCSSTTCSSSC-SCSSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcCeeCCccCCCCCCCCCCCCcChhhcc-cCccCCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 5678999999999999864332111 111000 11 1578999999999999999999999
|
| >d1bf2a3 c.1.8.1 (A:163-637) Isoamylase, central domain {Pseudomonas amyloderamosa [TaxId: 32043]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isoamylase, central domain species: Pseudomonas amyloderamosa [TaxId: 32043]
Probab=94.70 E-value=0.078 Score=52.94 Aligned_cols=56 Identities=21% Similarity=0.477 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCCEEEe-CCc---------------------cccc--cCCCCCCCC-----ccchHHHHHHHHHHHHHcC
Q 046395 184 EDFKFMSQNGLNAVRI-PVG---------------------WWIA--YDPKPPKPF-----VGGSLQALDNAFRWAQKYG 234 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~---------------------~w~~--~~p~~~~~~-----~~~~l~~ld~~i~~a~~~G 234 (535)
+-++.|+++|+|+|=| ||. ||.. ...+| .| ..+..+.|+++|+.|.++|
T Consensus 47 ~kLdyl~~LGvnaiwl~Pi~~~~~~~~~~~~~~~~~~~y~GY~~~d~~~vdp--~y~~~~~~~Gt~~d~~~LV~~aH~~G 124 (475)
T d1bf2a3 47 LKASYLASLGVTAVEFLPVQETQNDANDVVPNSDANQNYWGYMTENYFSPDR--RYAYNKAAGGPTAEFQAMVQAFHNAG 124 (475)
T ss_dssp HTHHHHHHHTCCEEEESCCBCBSCTTTTSSTTCCTTCCCSCCCBSCSSCBCG--GGCSCCSTTHHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHcCCCEEEeCCCCcCCCcccccccccccCcCCCCCCcccCCCcCc--ccccCCCCCCCHHHHHHHHHHHHhcC
Confidence 4478999999999998 442 2110 00000 01 1157889999999999999
Q ss_pred CEEEEec
Q 046395 235 MKVIVDL 241 (535)
Q Consensus 235 i~VIldl 241 (535)
|+||+|+
T Consensus 125 IrVilD~ 131 (475)
T d1bf2a3 125 IKVYMDV 131 (475)
T ss_dssp CEEEEEE
T ss_pred cEEEEEe
Confidence 9999999
|
| >d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.51 E-value=0.029 Score=55.01 Aligned_cols=59 Identities=19% Similarity=0.205 Sum_probs=40.6
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCC----C-----------CCc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPP----K-----------PFV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~----~-----------~~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++.++.||++|+|+|-|+=-+........| . ..+ -+..+.|+++|+.|+++||+||+|+
T Consensus 27 ~~kLdyLk~LGv~aI~L~Pi~~~~~~~~~GY~~~d~y~~~~~~~~~~vd~~~Gt~~df~~LV~~aH~~GIkVIlDv 102 (393)
T d1hvxa2 27 ANEANNLSSLGITALWLPPAYKGTSRSDVGYGVYDLYDLGEFNQKGAVRTKYGTKAQYLQAIQAAHAAGMQVYADV 102 (393)
T ss_dssp HHHHHHHHHTTCCEEEECCCSEESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECCCCcCCCCCCCCCCccCccccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 678899999999999983211110000000 0 011 1468899999999999999999998
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=94.24 E-value=0.095 Score=43.30 Aligned_cols=98 Identities=10% Similarity=0.083 Sum_probs=63.9
Q ss_pred EEEEeecCcEEEEe-cCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEe-eCCcEEEeecCCCe-EEEeccCCCCCCc
Q 046395 21 QLISTKLKKYLTAE-NGSETILMANHNSSSTSSWQTFRLWRINETFYNFRL-SNKQFIGLENQGNK-LVAVSATEKFPEP 97 (535)
Q Consensus 21 ~~~~~~~~~~~~a~-~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~a~~~~~~~~e~ 97 (535)
.||+...||||..+ ++|+..+..--..- +.-..+++-.. ++.|.||. ..|+++.+++..|. ++.-.+.....+.
T Consensus 4 ~I~N~~sGk~L~v~~~~~~~~~~~~~~~~--~~~qqW~~~~~-~g~y~i~n~~sg~~l~~~~~sg~~~~~~~~~~~~~qq 80 (131)
T d1upsa2 4 LIRNRQTGKFLYIEENNDKVSYGDITLKN--EKNAKWSKEYR-DGYTLLKNNETGEYLNIENQTGYIEHGKVPKTWWSAQ 80 (131)
T ss_dssp EEEETTTCCEEECCTTCSSCEEECCCTTT--TGGGCEEEEEE-TTEEEEEETTTCCEEECTTCCSBCEEECCCTTCGGGC
T ss_pred EEEEccCCcEEEEeCCCCcEEEeccccCC--CcccEEEEEeC-CCEEEEEECCCCcEEEccCCCCceEEEccCCCChhHe
Confidence 58899999999954 55555444332222 23334566665 67899994 58999999875444 5555666677899
Q ss_pred eEEEecCCCCceeEEEec--CCceEEEec
Q 046395 98 FQITRKNGEPHRVRFRAS--NGYFLQAKS 124 (535)
Q Consensus 98 f~~~~~~~~~~~v~I~~~--nG~flq~~~ 124 (535)
|.|+..+ +. .+|+.. .|..|.+.+
T Consensus 81 W~l~~~g-g~--~~i~n~~~s~~~L~v~~ 106 (131)
T d1upsa2 81 WSEVPVD-GY--TRFVNRWKPNMSIHTES 106 (131)
T ss_dssp EEEEEET-TE--EEEEESSSTTCEEECTT
T ss_pred EEEEecC-Cc--EEEEEeccCCeEEEEec
Confidence 9998864 33 445543 377887753
|
| >d1mxga2 c.1.8.1 (A:1-361) Bacterial alpha-amylase {Archaeon Pyrococcus woesei [TaxId: 2262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Archaeon Pyrococcus woesei [TaxId: 2262]
Probab=94.01 E-value=0.035 Score=53.89 Aligned_cols=58 Identities=28% Similarity=0.379 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCEEEeC-Cccccc-------cCCCCC---------CCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIP-VGWWIA-------YDPKPP---------KPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRip-v~~w~~-------~~p~~~---------~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|=|+ |. ... .++... ...++ +..+.|+++|+.|+++||+||||+
T Consensus 31 ~~kLdylk~LGv~~Iwl~Pv~-~~~~~~~~~gY~~~dy~~~~~~~~~~~vd~~~Gt~~d~~~LV~~aH~~GikVIlD~ 107 (361)
T d1mxga2 31 RSKIPEWYEAGISAIWLPPPS-KGMSGGYSMGYDPYDYFDLGEYYQKGTVETRFGSKEELVRLIQTAHAYGIKVIADV 107 (361)
T ss_dssp HHHHHHHHHHTCCEEECCCCS-EETTGGGCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhcCCCEEEeCcCe-eCCCCCCCCCCCcccccccCccccccCCCCCCCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 578899999999999874 42 110 010000 00111 458899999999999999999999
|
| >d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.89 E-value=0.033 Score=54.77 Aligned_cols=57 Identities=21% Similarity=0.537 Sum_probs=40.9
Q ss_pred HHHHHHHHcCCCEEEeCCc------------cccccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRIPVG------------WWIAYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRipv~------------~w~~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-.+.|+++|+++|=||=. ||...+|.... .++ +..+.|+++|+.|+++||+||+|+
T Consensus 27 e~~~yL~~lG~taIwl~P~~e~~~~~~~~~~~y~gY~~~dY~-v~~~~Gt~~dfk~Lv~~aH~~GI~VIlDv 97 (403)
T d1hx0a2 27 ECERYLGPKGFGGVQVSPPNENIVVTNPSRPWWERYQPVSYK-LCTRSGNENEFRDMVTRCNNVGVRIYVDA 97 (403)
T ss_dssp HHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSBSCSC-SCBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHhCCCEEEeCcCccCccCCCCCCCCceeecCCCCc-cCCCCCCHHHHHHHHHHHHhcCCEEEEEE
Confidence 3345699999999998532 23333332211 122 578999999999999999999999
|
| >d3bmva4 c.1.8.1 (A:1-406) Cyclodextrin glycosyltransferase {Thermoanaerobacterium [TaxId: 28895]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Thermoanaerobacterium [TaxId: 28895]
Probab=93.76 E-value=0.02 Score=56.38 Aligned_cols=58 Identities=21% Similarity=0.260 Sum_probs=39.0
Q ss_pred HHHH--HHHHcCCCEEEe-CCcccccc--------CCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFK--FMSQNGLNAVRI-PVGWWIAY--------DPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~--~ik~~G~N~VRi-pv~~w~~~--------~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++ .||++|+|+|=| |+.-.... .+.....|. -+..+.|+++|+.|.++||+||||+
T Consensus 59 ~kLd~~YLk~LGv~~I~L~Pi~~~~~~~~~~~~~~~~~~~~gY~~~d~~~vdp~~Gt~~dfk~LV~~aH~~Gi~VilD~ 137 (406)
T d3bmva4 59 NKINDGYLTGMGVTAIWIPQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDF 137 (406)
T ss_dssp HHHHTSTTGGGTCCEEEECCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhcCHHHHHHcCCCEEEECCcccccccccCCCCCCCChhhcCcccccccccCcccccHHHHHHHHHHHHhccccceeee
Confidence 5555 799999999998 55210000 000000021 1468999999999999999999999
|
| >d1lwha2 c.1.8.1 (A:1-391) 4-alpha-glucanotransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: 4-alpha-glucanotransferase species: Thermotoga maritima [TaxId: 2336]
Probab=93.70 E-value=0.04 Score=53.63 Aligned_cols=58 Identities=26% Similarity=0.395 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCEEEe-CCcccc---ccCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWI---AYDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~---~~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.|+++|+|+|-| ||.-.. ...+......++ +..+.|+++|+.|+++||+||+|+
T Consensus 27 ~kLdyl~~LGv~~I~l~Pi~~~~~~~GY~~~d~~~vd~~~Gt~~d~~~lv~~~h~~gi~VilD~ 90 (391)
T d1lwha2 27 NAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDSGIKVVLDL 90 (391)
T ss_dssp HTHHHHHHTTCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCCccCCCCcCcccCCHHHHHHHHHHHHhcCCEEeecc
Confidence 4578999999999998 552100 001100000011 478999999999999999999999
|
| >d2aaaa2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus niger, acid amylase [TaxId: 5061]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus niger, acid amylase [TaxId: 5061]
Probab=93.54 E-value=0.041 Score=53.80 Aligned_cols=58 Identities=17% Similarity=0.253 Sum_probs=40.2
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCC-CCCC---CCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDP-KPPK---PFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p-~~~~---~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.||++|+|+|-| ||. ...... .++. .|. -+..+.|+++|+.|.++||+||+|+
T Consensus 46 ~~kLdyL~~LGv~~I~L~Pi~-~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~~~k~lv~~aH~~Gi~VilD~ 118 (381)
T d2aaaa2 46 IDHLDYIEGMGFTAIWISPIT-EQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDV 118 (381)
T ss_dssp HHTHHHHHTTTCCEEEECCCE-EECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCCCc-cCCccCCCCCCCCcccccccccccccccCCHHHHHHHHHHHhhhhhcccccc
Confidence 35688999999999997 442 111000 0000 111 2468999999999999999999999
|
| >d1e43a2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Chimera (Bacillus amyloliquefaciens) and (Bacillus licheniformis) [TaxId: 1390]
Probab=93.54 E-value=0.061 Score=52.61 Aligned_cols=58 Identities=21% Similarity=0.229 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCCC----CCC-----------cc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKPP----KPF-----------VG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~----~~~-----------~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|-| |+. ........+ ..| ++ +..+.|.++|+.|.++||+||+|+
T Consensus 24 ~~kLdylk~LGvtaI~L~Pi~-~~~~~~~~gy~~~~~Y~~~~~~~~~~vd~~~Gt~~df~~Lv~~~H~~Gi~VilD~ 99 (393)
T d1e43a2 24 QNDAEHLSDIGITAVWIPPAY-KGLSQSDNGYGPYDLYDLGEFQQKGTVRTKYGTKSELQDAIGSLHSRNVQVYGDV 99 (393)
T ss_dssp HHHHHHHHHHTCCEEEECCCS-EESSTTCCSSSEEETTCSSCSCBTTBSSCSSCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcCc-cCCCCCCCCCCcccCcccccccccCccCCCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 35599999999999998 332 111110000 001 11 458999999999999999999999
|
| >d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707 [TaxId: 1416]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus sp. 707 [TaxId: 1416]
Probab=93.50 E-value=0.052 Score=52.99 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=40.8
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCCC----CCC-----------cc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKPP----KPF-----------VG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~----~~~-----------~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++-++.|+++|+|+|=| ||. ........+ ..| ++ +..+.|+++|+.|.++||+||||+
T Consensus 24 ~~kLdyL~~LGv~aIwL~Pi~-~~~~~~~~gY~~~~~yd~~~~~~~~~vd~~~Gt~~df~~Lv~~aH~~GIkVilDv 99 (394)
T d2d3na2 24 NSDASNLKSKGITAVWIPPAW-KGASQNDVGYGAYDLYDLGEFNQKGTVRTKYGTRSQLQAAVTSLKNNGIQVYGDV 99 (394)
T ss_dssp HHHHHHHHHHTCCEEEECCCS-EESSTTCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECcCc-cCCCCCCCCCCcccCcccccccccCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 68889999999999997 332 111100000 001 11 468999999999999999999999
|
| >d1uoka2 c.1.8.1 (A:1-479) Oligo-1,6, glucosidase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Oligo-1,6, glucosidase species: Bacillus cereus [TaxId: 1396]
Probab=93.48 E-value=0.053 Score=54.27 Aligned_cols=54 Identities=19% Similarity=0.427 Sum_probs=39.1
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.||++|+|+|-| ||.- .+.....|. -+..+.++++|+.|.++||+||||+
T Consensus 35 ~kLdYLk~LGv~~I~l~Pi~~----~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (479)
T d1uoka2 35 SKLDYLKELGIDVIWLSPVYE----SPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHERNMKLMMDL 99 (479)
T ss_dssp TTHHHHHHHTCCEEEECCCEE----CCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCcC----CCCCCCCcCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 3477999999999998 4421 111100121 1578999999999999999999999
|
| >d2guya2 c.1.8.1 (A:1-381) Fungal alpha-amylases {Aspergillus oryzae, Taka-amylase [TaxId: 5062]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Fungal alpha-amylases species: Aspergillus oryzae, Taka-amylase [TaxId: 5062]
Probab=93.47 E-value=0.044 Score=53.51 Aligned_cols=59 Identities=19% Similarity=0.296 Sum_probs=40.5
Q ss_pred HHHHHHHHcCCCEEEe-CCcccccc-CC--CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAY-DP--KPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~-~p--~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
+-++.||++|+|+|=| ||....-. .+ .+...|. -+..+.++++|+.|+++||+||+|+-
T Consensus 47 ~~Ldyl~~LGv~~I~L~Pi~~~~~~~~~~~~~~~gY~~~d~~~vd~~~Gt~~dfk~lv~~~H~~Gi~VilD~V 119 (381)
T d2guya2 47 DKLDYIQGMGFTAIWITPVTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVV 119 (381)
T ss_dssp HTHHHHHTTTCCEEEECCCEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HhHHHHHHCCCCEEEeCCCCCCCcccCCCCCCCCCcccccccccccCCCCHHHHHHHHHHHHhhccceeeecc
Confidence 5589999999999997 44210000 00 0111121 25789999999999999999999983
|
| >d1qhoa4 c.1.8.1 (A:1-407) Cyclodextrin glycosyltransferase {Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Cyclodextrin glycosyltransferase species: Bacillus stearothermophilus, maltogenic alpha-amylase [TaxId: 1422]
Probab=93.39 E-value=0.034 Score=54.74 Aligned_cols=58 Identities=22% Similarity=0.298 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCC-----CCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDP-----KPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p-----~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+-++.||++|+|+|=| ||.- ..... .....|. -+..+.|+++|+.|.++||+||||+
T Consensus 55 ~~kLdyl~~LGv~~I~L~Pi~~-~~~~~~~~~~~~~~gY~~~d~~~id~~~Gt~~d~k~Lv~~~H~~Gi~VilD~ 128 (407)
T d1qhoa4 55 RQKLPYLKQLGVTTIWLSPVLD-NLDTLAGTDNTGYHGYWTRDFKQIEEHFGNWTTFDTLVNDAHQNGIKVIVDF 128 (407)
T ss_dssp HHTHHHHHHHTCCEEEECCCEE-ECSSCSSTTCCCTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEeCcccc-CCcccCCCCCCCCCceeeeecCCCCCCCCCHHHHHHHHHHhhhcccceeecc
Confidence 35678999999999998 4421 00000 0001121 1568999999999999999999998
|
| >d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltogenic amylase, central domain species: Thermoactinomyces vulgaris, TVAII [TaxId: 2026]
Probab=93.34 E-value=0.042 Score=53.27 Aligned_cols=135 Identities=14% Similarity=0.142 Sum_probs=76.1
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccc---cCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec---CCCCCCC-----
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIA---YDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL---HALRVSQ----- 248 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~---~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl---H~~pg~~----- 248 (535)
.+-++.||++|+|+|-| ||.-... ..+......+ -+..+.++++|+.|.++||+||+|+ |..+...
T Consensus 56 ~~kLdyl~~lGi~~I~l~Pv~~~~~~~gY~~~~~~~vd~~~Gt~~d~~~lv~~~H~~Gi~vilD~V~NH~s~~~~~~~~~ 135 (382)
T d1wzla3 56 IDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKIILDAVFNHAGDQFFAFRDV 135 (382)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCTTSHHHHHH
T ss_pred HHhhHHHHHCCCCEEEECCcCCCCcccCCccccccccccCCCCHHHHHHHHHHHHhcccceEeeeeecccccccccccch
Confidence 35578999999999997 6531000 0000000001 1478999999999999999999997 4321100
Q ss_pred ---------CCC----CC--CCCCC-----------CC--CCCC-hHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCC
Q 046395 249 ---------NGS----PH--SGSRD-----------GF--QEWS-DSDIQETVAIIDFLASRYADHPSLVAIELMNEPKA 299 (535)
Q Consensus 249 ---------ng~----~~--sg~~~-----------~~--~~W~-~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~ 299 (535)
..+ ++ ..... .. ..+. ++.++..++.+...++ + .|-||=+-.-...
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLn~~n~~v~~~~~~~~~~w~~-~----gvDGfR~D~~~~~ 210 (382)
T d1wzla3 136 LQKGEQSRYKDWFFIEDFPVSKTSRTNYETFAVQVPAMPKLRTENPEVKEYLFDVARFWME-Q----GIDGWRLDVANEV 210 (382)
T ss_dssp HHHGGGCTTGGGBCBSSSSCCCSSCCSBCBSSSSCTTCBBBCTTSHHHHHHHHHHHHHHHH-T----TCCEEEETTGGGS
T ss_pred hhcCccccccccccccccccccCCCCcccccccccccCCccCCCCHHHHHHHHHHHHHHHH-c----CCCceeecchhhc
Confidence 000 00 00000 00 0111 5666666666666554 3 3445555544432
Q ss_pred CCCChHHHHHHHHHHHHHHHhcCCCcEEEE
Q 046395 300 PDLKLDSLKTYYKAGYDTVRKYSSSAYVIL 329 (535)
Q Consensus 300 ~~~~~~~~~~~~~~~~~aIR~~~p~~~ii~ 329 (535)
...+.+.....+++..|..+++-
T Consensus 211 -------~~~~~~~~~~~~~~~~p~~~~i~ 233 (382)
T d1wzla3 211 -------DHAFWREFRRLVKSLNPDALIVG 233 (382)
T ss_dssp -------CHHHHHHHHHHHHHHCTTCEEEE
T ss_pred -------chhhhhHHHHHHHhhCCceEEee
Confidence 25667778888899999876553
|
| >d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella sp., lx3 [TaxId: 576]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Isomaltulose synthase PalI species: Klebsiella sp., lx3 [TaxId: 576]
Probab=93.28 E-value=0.059 Score=53.87 Aligned_cols=54 Identities=20% Similarity=0.438 Sum_probs=39.5
Q ss_pred HHHHHHHHcCCCEEEe-CCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.||++|+|+|-| ||.- .|....-|. -+..+.++++|+.|+++||+||||+
T Consensus 35 ~kLdyLk~LGv~~I~L~Pi~~----~~~~~~GY~~~d~~~vd~~~Gt~~df~~Lv~~aH~~Gi~VilD~ 99 (478)
T d1m53a2 35 EKLDYLKSLGIDAIWINPHYD----SPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKRNMRLMIDV 99 (478)
T ss_dssp HTHHHHHHHTCCEEEECCCEE----CCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCC----CCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHCCCEEEecc
Confidence 4588999999999998 3321 111000021 1578999999999999999999999
|
| >d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Animal alpha-amylase species: Yellow mealworm (Tenebrio molitor), larva [TaxId: 7067]
Probab=92.81 E-value=0.037 Score=53.91 Aligned_cols=58 Identities=24% Similarity=0.557 Sum_probs=40.1
Q ss_pred HHHHH-HHHHcCCCEEEeCCc----------cccccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFK-FMSQNGLNAVRIPVG----------WWIAYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~-~ik~~G~N~VRipv~----------~w~~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
++.+. .|+++|+++|=|+=- ||...+|..-. .+ -+..+.|+++|+.|.++||+||||+
T Consensus 25 ~~~~~~yl~~lG~tai~l~P~~e~~~~~~~~~~~~Y~~~dY~-id~~~Gt~~df~~LV~~aH~~GI~VilDv 95 (378)
T d1jaea2 25 ADECERFLQPQGFGGVQISPPNEYLVADGRPWWERYQPVSYI-INTRSGDESAFTDMTRRCNDAGVRIYVDA 95 (378)
T ss_dssp HHHHHHTTTTTTEEEEECCCCSCBBCCTTCCGGGGGSBCCSC-SEETTEEHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCEEEeCcccccCCCCCCCCccccCCccce-eCCCCCCHHHHHHHHHHHHhcCceeeeee
Confidence 34555 599999999988321 12222222111 11 1578999999999999999999999
|
| >d1ua7a2 c.1.8.1 (A:4-347) Bacterial alpha-amylase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Bacillus subtilis [TaxId: 1423]
Probab=92.05 E-value=0.082 Score=50.94 Aligned_cols=58 Identities=24% Similarity=0.382 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCCEEEe-CCccccccCCCC-C------CCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRI-PVGWWIAYDPKP-P------KPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRi-pv~~w~~~~p~~-~------~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.++.||++|+|+|=| ||. ........ + ..|+ -+..+.|+++|+.|+++||+||+|+
T Consensus 20 ~~~ldyl~~lGv~aIwl~Pi~-~~~~~~~~~~~~~~~y~gY~~~dy~~vd~~~Gt~~df~~LV~~aH~~Gi~VilD~ 95 (344)
T d1ua7a2 20 KHNMKDIHDAGYTAIQTSPIN-QVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDA 95 (344)
T ss_dssp HHTHHHHHHTTCSEEEECCCE-EECCTGGGCCBGGGGGGGGCEEEEEEEETTTEEHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHhHHHHHHcCCCEEEeCCCe-eCCCcCCCCCCCCCCccccccccCCCCCCCCCCHHHHHHHHHHhcccceeEeecc
Confidence 46678999999999997 442 11000000 0 0011 1568999999999999999999999
|
| >d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltosyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=91.89 E-value=0.062 Score=55.08 Aligned_cols=58 Identities=19% Similarity=0.317 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCEEEe-CCcccccc--CCCCCCCCc------------------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIAY--DPKPPKPFV------------------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~~--~p~~~~~~~------------------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-|+.||++|+|+|=| ||.-..-. .+..+..|. -+..+.++++|+.|+++||+||||+
T Consensus 124 ~kLdYLk~LGvtaI~L~Pi~~~~~~~~~~~~~~GY~~~dy~~~dp~~~~~~~~~~Gt~~dfk~lV~~~H~~GI~VIlDv 202 (572)
T d1gjwa2 124 LLLPFVKSLGADAIYLLPVSRMSDLFKKGDAPSPYSVKNPMELDERYHDPLLEPFKVDEEFKAFVEACHILGIRVILDF 202 (572)
T ss_dssp HTHHHHHHHTCCEEEECCCEEECCSSCSSSSCCTTSEEEEEEECGGGSCGGGTTSCHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEeCCcccCccccCCCCCCCCCCccCCCCCCcccccccccCCCCHHHHHHHHHHHHhcCcEEEEEe
Confidence 4588999999999997 55311000 000000011 1568999999999999999999999
|
| >d1g5aa2 c.1.8.1 (A:1-554) Amylosucrase {Neisseria polysaccharea [TaxId: 489]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Amylosucrase species: Neisseria polysaccharea [TaxId: 489]
Probab=90.84 E-value=0.18 Score=51.91 Aligned_cols=58 Identities=16% Similarity=0.314 Sum_probs=39.6
Q ss_pred HHHHHHHHcCCCEEEe-CCccccc------cCCCCCCCCcc--chHHHHHHHHHHHHHcCCEEEEec
Q 046395 184 EDFKFMSQNGLNAVRI-PVGWWIA------YDPKPPKPFVG--GSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 184 ~D~~~ik~~G~N~VRi-pv~~w~~------~~p~~~~~~~~--~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
+-++.||++|+|+|=| ||.-... ..+......++ +..+.|+++|+.|+++||+||+|+
T Consensus 117 ~kLdYLk~LGVt~I~L~Pi~~~p~~~sd~GY~v~dy~~Vdp~lGt~edl~~Lv~~aH~rGI~VilD~ 183 (554)
T d1g5aa2 117 DKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEAGISAVVDF 183 (554)
T ss_dssp TTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCCCCcCcccCCCCCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4578999999999998 5421000 00000000111 468999999999999999999999
|
| >d2bvya2 c.1.8.3 (A:5-370) Mannanase A, ManA {Cellulomonas fimi [TaxId: 1708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-glycanases domain: Mannanase A, ManA species: Cellulomonas fimi [TaxId: 1708]
Probab=90.57 E-value=5.5 Score=38.00 Aligned_cols=178 Identities=16% Similarity=0.124 Sum_probs=95.8
Q ss_pred chHHHHHHHHHHHHHcCCEEEEecCCC-CCCCCC-CCCCCCCCCCCCCChHHHHHHHHHHH---HHHHHhCCCC----cE
Q 046395 218 GSLQALDNAFRWAQKYGMKVIVDLHAL-RVSQNG-SPHSGSRDGFQEWSDSDIQETVAIID---FLASRYADHP----SL 288 (535)
Q Consensus 218 ~~l~~ld~~i~~a~~~Gi~VIldlH~~-pg~~ng-~~~sg~~~~~~~W~~~~~~~~~~~~~---~la~ry~~~p----~V 288 (535)
..++.+.+.+.++.++|--|.+.+|.. |..... ++.+........=.....+.+..+++ .++...++.. -|
T Consensus 85 ~~~~~~~~~~~~~~~~Ggivt~~wH~~nP~~g~~~~~~~~~~~~~vlpg~~~~~~~~~~l~~ia~~a~~Lk~~~~~~VPV 164 (366)
T d2bvya2 85 ENIALFADYIRKADAIGGVNTVSAHVENFVTGGSFYDTSGDTLRAVLPGGSHHAELVAYLDDIAELADASRRDDGTLIPI 164 (366)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEECCCCCTTTSCCTTCCTTCHHHHHSTTSTTHHHHHHHHHHHHHHHHHCBCTTSCBCCE
T ss_pred hhHHHHHHHHHHhhccCCEEEEEEecCCCCCCCcccCCchhHHHHhcCCCChhHHHHHHHHHHHHHHHHHHhccCCCccE
Confidence 357777888888888999999999954 321111 11110000000000122344444444 4455665532 14
Q ss_pred EEEEeecCCCCC-------CCChHHHHHHHHHHHHHHHhc-CCCcEEEE-cC--CCCCChhhhhcc-cCCCCcEEEEEee
Q 046395 289 VAIELMNEPKAP-------DLKLDSLKTYYKAGYDTVRKY-SSSAYVIL-SN--RLGGEWSELLSF-ASNLSRVVIDVHF 356 (535)
Q Consensus 289 ~~~el~NEP~~~-------~~~~~~~~~~~~~~~~aIR~~-~p~~~ii~-~~--~~g~~~~~~~~~-~~~~~n~v~d~H~ 356 (535)
+ |=.+.|..+. ..+++.+++.++.+++.+|.. .-++++.+ +. ..+.....++.. |..+--.++.+-.
T Consensus 165 l-~Rp~HE~nG~WfwWg~~~~~p~~y~~lwr~~~d~l~~~~g~~Nliwvwsp~~~~~~~~~~~~~~YPGDdyVDivG~D~ 243 (366)
T d2bvya2 165 V-FRPWHENAGSWFWWGAAYGSPGEYQELYRFTVEYLRDVKGVSNFLYAWGPGGGFGGNRDVYLRTYPGDAFVDVLGLDT 243 (366)
T ss_dssp E-EECSTTTTSSSSTTSTTSSCHHHHHHHHHHHHHHHHHTSCCCSEEEEECCCSCCTTCHHHHGGGCCCTTTCSEECCEE
T ss_pred E-EeechhcCCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCcceEEEeecCCCCCcccchhhhhCCCCCeEEEEEEec
Confidence 4 9999999864 136788999999999999975 45566554 32 122333434333 3333345677667
Q ss_pred cCcCCCcccCCChhhhHHHHHHhhhHHHHHHhhcCCCcEEEeccCCCc
Q 046395 357 YNLFWDNFNKMSVQQNIDYIYRQRSSDLRNVTTSDGPLSFVGEWSCEW 404 (535)
Q Consensus 357 Y~~~~~~~~~~~~~~~i~~i~~~~~~~l~~~~~~~~p~v~vGEfg~~~ 404 (535)
|..... ......+.... ..+..+.+..++|+.++|+|..-
T Consensus 244 Y~~~~~-------~~~~~~~~~~l-~~~~~~a~~~~Kp~altE~G~~~ 283 (366)
T d2bvya2 244 YDSTGS-------DAFLAGLVADL-RMIAEIADEKGKVSAFTEFGVSG 283 (366)
T ss_dssp EESSCC-------HHHHHHHHHHH-HHHHHHHHHHTCEECBCEEEETT
T ss_pred cCCCCC-------cchHHHHHHHH-HHHHHHHHhcCCcEEEeceeccC
Confidence 754321 11222222211 22334444445668899999753
|
| >d1wzaa2 c.1.8.1 (A:28-436) Bacterial alpha-amylase {Halothermothrix orenii [TaxId: 31909]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Bacterial alpha-amylase species: Halothermothrix orenii [TaxId: 31909]
Probab=88.79 E-value=0.2 Score=48.43 Aligned_cols=54 Identities=26% Similarity=0.367 Sum_probs=35.8
Q ss_pred HHHHcCCCEEEe-CCcccc---ccCCCCCCCCc--cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 188 FMSQNGLNAVRI-PVGWWI---AYDPKPPKPFV--GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 188 ~ik~~G~N~VRi-pv~~w~---~~~p~~~~~~~--~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.||++|+|+|=| ||.--. ...+......+ -+..+.|+++|+.|.++||+||+|+
T Consensus 43 ~i~~LGv~~i~l~Pi~~~~~~~GY~~~d~~~vd~~~G~~~dlk~lv~~~H~~Gi~VilD~ 102 (409)
T d1wzaa2 43 TIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQRGIKVIIDL 102 (409)
T ss_dssp CCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHhhcCccEEEECCCCCCCCCCCcCcccCCCcCcccCCHHHHHHHHHHHHhcCCEEEEec
Confidence 358999999998 552100 00110000001 1568999999999999999999999
|
| >d2ihoa1 b.42.2.1 (A:2-155) Agglutinin MOA, N-terminal domain {Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Agglutinin MOA, N-terminal domain species: Fairy-ring mushroom (Marasmius oreades) [TaxId: 181124]
Probab=88.62 E-value=2.8 Score=34.33 Aligned_cols=104 Identities=8% Similarity=0.073 Sum_probs=68.9
Q ss_pred eeEEEEeecCcEEEEec---CCCceEEec---cCCCCCCCCceeEEEEec--CCeEEEEe-eCCcEEEeecC---CCe-E
Q 046395 19 QVQLISTKLKKYLTAEN---GSETILMAN---HNSSSTSSWQTFRLWRIN--ETFYNFRL-SNKQFIGLENQ---GNK-L 85 (535)
Q Consensus 19 ~~~~~~~~~~~~~~a~~---~g~~~~~an---r~~~~~~~we~f~~~~~~--~~~~~~~~-~~~~~v~~~~~---~~~-~ 85 (535)
..+|+++..|++|-+.. .-|++|+.- -+.. ...+.|.+-.+. .+.|.+|. ..++.+.+.+. ++. |
T Consensus 6 ~Y~I~n~~s~~~ldv~~~~~~~G~~v~~w~~~~~~~--~~nQ~W~~~~~~~~~~~y~i~n~~s~~~l~~~~~~~~~g~~v 83 (154)
T d2ihoa1 6 IYHIENAGVPSAIDLKDGSSSDGTPIVGWQFTPDTI--NWHQLWLAEPIPNVADTFTLCNLFSGTYMDLYNGSSEAGTAV 83 (154)
T ss_dssp EEEEEESSSSCEEEEGGGCCSTTEEEEEECCCTTSC--CTTCEEEEEECTTSTTEEEEEETTTCCEEEEGGGCCSTTEEE
T ss_pred EEEEEECCCCCEEEeCCCCCCCCCEEEEEecCCCCC--CcceEEEEEecCCcCceEEEEEcCCCeEEeccCCcCCCCcEE
Confidence 44799999999997654 345678763 3333 356777776666 36899995 47888887642 233 4
Q ss_pred EEe---ccCCCCCCceEEEecCCCCceeEEEecC-CceEEEecc
Q 046395 86 VAV---SATEKFPEPFQITRKNGEPHRVRFRASN-GYFLQAKSE 125 (535)
Q Consensus 86 ~a~---~~~~~~~e~f~~~~~~~~~~~v~I~~~n-G~flq~~~~ 125 (535)
+.- ..+.++++.|.|++..+.. ..+|...+ |..|.+.+.
T Consensus 84 ~~~~~~~~~~~~~Q~W~~~~~~~g~-~y~i~n~~sg~~Ldv~~~ 126 (154)
T d2ihoa1 84 NGWQGTAFTTNPHQLWTIKKSSDGT-SYKIQNYGSKTFVDLVNG 126 (154)
T ss_dssp EEECCCTTCCCGGGCEEEEECTTSS-SEEEEETTTCCEEEEGGG
T ss_pred EEEeecccCCCcccEEEEccCCCcc-eEEEEEcCCCcEEEcCCC
Confidence 432 2455779999999986553 34566555 888877543
|
| >d1upsa2 b.42.2.3 (A:290-420) GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain {Clostridium perfringens [TaxId: 1502]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain domain: GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase, GngC, C-terminal domain species: Clostridium perfringens [TaxId: 1502]
Probab=88.39 E-value=1.1 Score=36.57 Aligned_cols=83 Identities=16% Similarity=0.136 Sum_probs=53.5
Q ss_pred CCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEee--CCcEEEeecCCCeEEEeccCCC
Q 046395 16 DGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLS--NKQFIGLENQGNKLVAVSATEK 93 (535)
Q Consensus 16 ~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~a~~~~~~ 93 (535)
|| ..+|++...|+||..++..|+.++.--..- ..=+.|+|-.. ++.+.|+.. .++++-+++..+..+++-...+
T Consensus 44 ~g-~y~i~n~~sg~~l~~~~~sg~~~~~~~~~~--~~~qqW~l~~~-gg~~~i~n~~~s~~~L~v~~~sG~~~~~~~~~~ 119 (131)
T d1upsa2 44 DG-YTLLKNNETGEYLNIENQTGYIEHGKVPKT--WWSAQWSEVPV-DGYTRFVNRWKPNMSIHTESYEGVLQYGNVPNT 119 (131)
T ss_dssp TT-EEEEEETTTCCEEECTTCCSBCEEECCCTT--CGGGCEEEEEE-TTEEEEEESSSTTCEEECTTCCSBCEEECCCTT
T ss_pred CC-EEEEEECCCCcEEEccCCCCceEEEccCCC--ChhHeEEEEec-CCcEEEEEeccCCeEEEEecCCcceeeeeccCC
Confidence 55 589999999999999988777665444433 22244555554 466777743 5788888764455666543332
Q ss_pred -CCCceEEEe
Q 046395 94 -FPEPFQITR 102 (535)
Q Consensus 94 -~~e~f~~~~ 102 (535)
.+..|+|++
T Consensus 120 ~~~qqW~l~p 129 (131)
T d1upsa2 120 YWTSQWQLIP 129 (131)
T ss_dssp CGGGCEEEEE
T ss_pred CcCccEEEEE
Confidence 345677765
|
| >d2fhfa5 c.1.8.1 (A:403-965) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Pullulanase PulA species: Klebsiella pneumoniae [TaxId: 573]
Probab=87.91 E-value=0.36 Score=48.64 Aligned_cols=23 Identities=26% Similarity=0.495 Sum_probs=20.3
Q ss_pred hHHHHHHHHHHH-HHcCCEEEEec
Q 046395 219 SLQALDNAFRWA-QKYGMKVIVDL 241 (535)
Q Consensus 219 ~l~~ld~~i~~a-~~~Gi~VIldl 241 (535)
.++.++++|+.| +++||+||||+
T Consensus 178 ~l~Efk~lV~a~~H~rGIkVIlD~ 201 (563)
T d2fhfa5 178 RIKEFRTMIQAIKQDLGMNVIMDV 201 (563)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred HHHHHHHHHHHHhhccCceeeecC
Confidence 378899999887 78899999999
|
| >d1yhta1 c.1.8.6 (A:16-359) Dispersin B, DspB {Actinobacillus actinomycetemcomitans [TaxId: 714]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: Dispersin B, DspB species: Actinobacillus actinomycetemcomitans [TaxId: 714]
Probab=87.76 E-value=4.5 Score=38.06 Aligned_cols=147 Identities=15% Similarity=0.119 Sum_probs=84.8
Q ss_pred hHHHHHHHHHcCCCEEEeCCcc---cccc---CCC--------CC----CCCccc---hHHHHHHHHHHHHHcCCEEEEe
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGW---WIAY---DPK--------PP----KPFVGG---SLQALDNAFRWAQKYGMKVIVD 240 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~---w~~~---~p~--------~~----~~~~~~---~l~~ld~~i~~a~~~Gi~VIld 240 (535)
.++-++.|+..++|.+-+-+.= |.+. -|. .. .++... .-+.++++++.|+++||.||..
T Consensus 20 ik~~id~ma~~K~N~lhlHltDdq~~~le~~~~p~l~~~~~~~~~~~~~~~~~~~~~yt~~e~~~lv~yA~~rgI~viPe 99 (344)
T d1yhta1 20 IKSFIDTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGIYINPYTGKPFLSYRQLDDIKAYAKAKGIELIPE 99 (344)
T ss_dssp HHHHHHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSCEECTTTCCEEBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCcEEEEEeecCCCceecccCCchhhhhccccCCCCCCCCCCCCcccCHHHHHHHHHHHHHcCCEEEec
Confidence 4788889999999998553210 0110 000 00 011111 5788999999999999999976
Q ss_pred cC--CCCCCC-------------CCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCCh
Q 046395 241 LH--ALRVSQ-------------NGSPHSGSRDGFQEW-SDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKL 304 (535)
Q Consensus 241 lH--~~pg~~-------------ng~~~sg~~~~~~~W-~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~ 304 (535)
+- +.-++. .+.. .....+...- .++..+-..++++++++.|.+....+.+.- =|........
T Consensus 100 iD~PGH~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~~~t~~~~~~l~~e~~~~F~~~~~~~HiGg-DE~~~~~~~~ 177 (344)
T d1yhta1 100 LDSPNHMTAIFKLVQKDRGVKYLQGLK-SRQVDDEIDITNADSITFMQSLMSEVIDIFGDTSQHFHIGG-DEFGYSVESN 177 (344)
T ss_dssp EEESSSCHHHHHHHHHHHCHHHHHHHB-CSSCTTSBCTTCHHHHHHHHHHHHHHHHHHGGGCSEEEEEC-CSCCTTSCCH
T ss_pred cchhhHHHHHHHhchhhcCCCCccCCC-CCCCCCcccCCCchhHHHHHHHHHHHHHhcCCccceEEeec-hhhhcccccc
Confidence 63 210000 0000 0000011111 156777778899999999975334432322 5554333456
Q ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEcC
Q 046395 305 DSLKTYYKAGYDTVRKYSSSAYVILSN 331 (535)
Q Consensus 305 ~~~~~~~~~~~~aIR~~~p~~~ii~~~ 331 (535)
..+..|+.++.+.+++.+. .++++.+
T Consensus 178 ~~~~~~~~~~~~~~~~~Gk-~~~~W~d 203 (344)
T d1yhta1 178 HEFITYANKLSYFLEKKGL-KTRMWND 203 (344)
T ss_dssp HHHHHHHHHHHHHHHHTTC-EEEEEST
T ss_pred hHHHHHHHHHHHHHHHCCC-EEEEEhh
Confidence 6788999999999999865 4456654
|
| >d1hl9a2 c.1.8.11 (A:7-356) Putative alpha-L-fucosidase, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Putative alpha-L-fucosidase, catalytic domain domain: Putative alpha-L-fucosidase, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=86.79 E-value=2.8 Score=39.94 Aligned_cols=129 Identities=9% Similarity=-0.026 Sum_probs=77.7
Q ss_pred cchHHHHHHHHHcCCCEEEeCC------ccccccCCCCCCCCcc----chHHHHHHHHHHHHHcCCEEEEecCCCCCCCC
Q 046395 180 YITEEDFKFMSQNGLNAVRIPV------GWWIAYDPKPPKPFVG----GSLQALDNAFRWAQKYGMKVIVDLHALRVSQN 249 (535)
Q Consensus 180 ~ite~D~~~ik~~G~N~VRipv------~~w~~~~p~~~~~~~~----~~l~~ld~~i~~a~~~Gi~VIldlH~~pg~~n 249 (535)
+-.++-++.+|++|+.-|=|-- .-|.- .-.+|+. ..-+.+.+++++|+++||++-+-+|..-.
T Consensus 99 fDa~~Wv~~ak~aGaky~vlTaKHHDGF~Lw~S----~~t~~n~~~~~~~rDiv~el~~A~rk~Glk~G~YyS~~~d--- 171 (350)
T d1hl9a2 99 WDPQEWADLFKKAGAKYVIPTTKHHDGFCLWGT----KYTDFNSVKRGPKRDLVGDLAKAVREAGLRFGVYYSGGLD--- 171 (350)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEEECTTCCBSSCC----SSCSCBTTTSTTCSCHHHHHHHHHHHTTCEECEEECCSCC---
T ss_pred CCHHHHHHHHHHcCCCEEEEEEEecCCcccCCC----CCCCCCCcCCCCCCchHHHHHHHHHhcCCceeEEeccccc---
Confidence 5567888899999999987722 11211 1111221 13577999999999999999998884311
Q ss_pred CCCCCCCCC-------CCCCCChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChHHHHHHHHHHHHHHHhcC
Q 046395 250 GSPHSGSRD-------GFQEWSDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLDSLKTYYKAGYDTVRKYS 322 (535)
Q Consensus 250 g~~~sg~~~-------~~~~W~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~~~~~~~~~~~~aIR~~~ 322 (535)
|.+..... ......+.+.+.+..-+++|..+|+ |.++-|+-.-+.. ... -++++++.||+..
T Consensus 172 -w~~~~~~~~~~~~~~~~~~~~~~y~~~~~~Ql~EL~~~Y~--p~~~w~D~~~~~~----~~~----~~~~~~~~i~~~q 240 (350)
T d1hl9a2 172 -WRFTTEPIRYPEDLSYIRPNTYEYADYAYKQVMELVDLYL--PDVLWNDMGWPEK----GKE----DLKYLFAYYYNKH 240 (350)
T ss_dssp -TTSCCSCCCSGGGGGTCSCCSHHHHHHHHHHHHHHHHHHC--CSCEEECSCCCGG----GTT----HHHHHHHHHHHHC
T ss_pred -cccccCCCCCcchhcccCccchHHHHHHHHHHHHHHhccC--CceEEeccccccc----chh----hHHHHHHHHHHhC
Confidence 11111000 0011115677888888999999997 4555455422111 111 2356788889998
Q ss_pred CCcE
Q 046395 323 SSAY 326 (535)
Q Consensus 323 p~~~ 326 (535)
|..+
T Consensus 241 p~~~ 244 (350)
T d1hl9a2 241 PEGS 244 (350)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 8764
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=86.74 E-value=1.8 Score=35.75 Aligned_cols=84 Identities=10% Similarity=0.075 Sum_probs=62.6
Q ss_pred CCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEE-ecCCeEEEEe-eC-CcEEEeecCCCeEEEeccCC
Q 046395 16 DGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWR-INETFYNFRL-SN-KQFIGLENQGNKLVAVSATE 92 (535)
Q Consensus 16 ~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~-~~~~~~~~~~-~~-~~~v~~~~~~~~~~a~~~~~ 92 (535)
++...+|+++.+++.|-+.+..|+.++.-...- ++-+.|++-. .+++.|.+|. .+ ++-+-+.+ |.+|+--...=
T Consensus 52 ~~g~Y~I~~~~s~~~l~~~~~~g~~v~~~~~~g--~~~Q~W~i~~~~~~g~y~I~n~~ns~~vLDv~g-g~~v~~~~~~g 128 (145)
T d1qxma1 52 NKQAYKIKVMDNTSLILTWNAPLSSVSVKTDTN--GDNQYWYLLQNYISRNVIIRNYMNPNLVLQYNI-DDTLMVSTQTS 128 (145)
T ss_dssp TTTEEEEEESSSSCCEEEECTTSSCEEEECCCC--CGGGCEEEEECTTTCCEEEEESSCTTEEEEECT-TSCEEEEECCS
T ss_pred CCCEEEEEECCCCCEEEeccCCCceEEEEcCCC--CchheEEEeecCCCCEEEEEEccCCCEEEEecC-CceEEEeCCCC
Confidence 456789999999999987766667777766666 7888888765 4578899995 44 66666665 66687777777
Q ss_pred CCCCceEEEe
Q 046395 93 KFPEPFQITR 102 (535)
Q Consensus 93 ~~~e~f~~~~ 102 (535)
+..+.|+|..
T Consensus 129 ~~nQ~w~~~~ 138 (145)
T d1qxma1 129 SSNQFFKFSN 138 (145)
T ss_dssp CGGGCEEEEE
T ss_pred CcccEEEEec
Confidence 8888887653
|
| >d1jaka1 c.1.8.6 (A:151-506) beta-N-acetylhexosaminidase {Streptomyces plicatus [TaxId: 1922]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: beta-N-acetylhexosaminidase catalytic domain domain: beta-N-acetylhexosaminidase species: Streptomyces plicatus [TaxId: 1922]
Probab=85.25 E-value=15 Score=34.36 Aligned_cols=140 Identities=16% Similarity=0.201 Sum_probs=82.1
Q ss_pred hHHHHHHHHHcCCCEEEeCCcc---cccc-CC---------------CCCCCCccchHHHHHHHHHHHHHcCCEEEEecC
Q 046395 182 TEEDFKFMSQNGLNAVRIPVGW---WIAY-DP---------------KPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLH 242 (535)
Q Consensus 182 te~D~~~ik~~G~N~VRipv~~---w~~~-~p---------------~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH 242 (535)
.++.++.|+...+|.+-+-+.= |.+. +. .+++.| ..+.+.++++.|+++||.||..+-
T Consensus 20 i~~~id~ma~~K~N~lh~Hl~D~~~~r~e~~~~p~l~~~ga~~~~~~~~~~~y---T~~di~~iv~ya~~rgI~viPEid 96 (356)
T d1jaka1 20 VKRYIDRVARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGSTEVGGGPGGYY---TKAEYKEIVRYAASRHLEVVPEID 96 (356)
T ss_dssp HHHHHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTSCCTTSSCCCCB---CHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHcCCeEEEEEEecCCCcceeecCCchhhhccCccccCCCCCCcc---CHHHHHHHHHHHHHcCCeEeecCC
Confidence 4678888999999998775521 1111 10 012224 578999999999999999998773
Q ss_pred C----------CCCC-CCCCC---CCCCCCCCCCC---ChHHHHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCCCCChH
Q 046395 243 A----------LRVS-QNGSP---HSGSRDGFQEW---SDSDIQETVAIIDFLASRYADHPSLVAIELMNEPKAPDLKLD 305 (535)
Q Consensus 243 ~----------~pg~-~ng~~---~sg~~~~~~~W---~~~~~~~~~~~~~~la~ry~~~p~V~~~el~NEP~~~~~~~~ 305 (535)
. .|.- ..+.. ..+...+.... .++..+-..++++++++-|.+ + .+.+ =.-|.. .....
T Consensus 97 ~PgH~~~~~~~~pel~~~~~~~~~~~~~~~~~~~l~~~~~~t~~f~~~v~~E~~~lfp~-~-~~Hi-GgDE~~--~~~~~ 171 (356)
T d1jaka1 97 MPGHTNAALASYAELNCDGVAPPLYTGTKVGFSSLCVDKDVTYDFVDDVIGELAALTPG-R-YLHI-GGDEAH--STPKA 171 (356)
T ss_dssp CSSSCHHHHHHCGGGSTTSCCCCCCCSCCCSCCCCCTTCHHHHHHHHHHHHHHHHTCCS-S-EEEC-CCCCCT--TSCHH
T ss_pred CcchhHHHHHhCccccccCCCCccccccCCCCcccccCchHHHHHHHHHHHHHHHhccc-c-EEEe-cccccc--cchHH
Confidence 2 1110 01100 01111111111 156677777888888887754 2 2211 122332 23567
Q ss_pred HHHHHHHHHHHHHHhcCCCcEEEEc
Q 046395 306 SLKTYYKAGYDTVRKYSSSAYVILS 330 (535)
Q Consensus 306 ~~~~~~~~~~~aIR~~~p~~~ii~~ 330 (535)
.+..|++++.+.+++.+. .++++.
T Consensus 172 ~~~~f~~~~~~~v~~~gk-~~~~W~ 195 (356)
T d1jaka1 172 DFVAFMKRVQPIVAKYGK-TVVGWH 195 (356)
T ss_dssp HHHHHHHHHHHHHHHTTC-EEEEEG
T ss_pred HHHHHHHHHHHHHHHcCC-ceEEee
Confidence 789999999999998765 334443
|
| >d1qxma1 b.42.2.1 (A:4-148) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=85.15 E-value=7.5 Score=31.64 Aligned_cols=108 Identities=19% Similarity=0.140 Sum_probs=71.0
Q ss_pred CCCCCCceeEEEEee-cCcEEEEecCCCceEEeccCCCCCCCCceeEEEE-ecCCeEEEEee-CCcEEEeecC-CCeEEE
Q 046395 12 NDLLDGTQVQLISTK-LKKYLTAENGSETILMANHNSSSTSSWQTFRLWR-INETFYNFRLS-NKQFIGLENQ-GNKLVA 87 (535)
Q Consensus 12 ~~~~~~~~~~~~~~~-~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~-~~~~~~~~~~~-~~~~v~~~~~-~~~~~a 87 (535)
.|++.|..-.|+|.. .+|.|-.- .++.|..=...- +.-..|++.. .+.+.|.||.. +++.+.+.+. |..++.
T Consensus 4 ~~~~~~~~y~i~~~~Ns~kvlD~~--s~t~Vq~w~~~g--~~nQkW~~~~~~~~g~Y~I~~~~s~~~l~~~~~~g~~v~~ 79 (145)
T d1qxma1 4 NDLRNNEVFFISPSNNTNKVLDKI--SQSEVKLWNKLS--GANQKWRLIYDTNKQAYKIKVMDNTSLILTWNAPLSSVSV 79 (145)
T ss_dssp TSCCTTCEEEEEETTCTTEEEEEC--SSSCEEEEECCC--CGGGCEEEEEETTTTEEEEEESSSSCCEEEECTTSSCEEE
T ss_pred cccCcCCEEEEEECCCCCeEEEec--CCCEEEEEcCCC--ChhheEEEEEcCCCCEEEEEECCCCCEEEeccCCCceEEE
Confidence 688999999999966 45666532 334454433333 4556667665 44588999954 6777766433 555888
Q ss_pred eccCCCCCCceEEEecCCCCceeEEEe-c-CCceEEEec
Q 046395 88 VSATEKFPEPFQITRKNGEPHRVRFRA-S-NGYFLQAKS 124 (535)
Q Consensus 88 ~~~~~~~~e~f~~~~~~~~~~~v~I~~-~-nG~flq~~~ 124 (535)
....-++.+.|.|++..++ +..+|+. . .|+.|-+.+
T Consensus 80 ~~~~g~~~Q~W~i~~~~~~-g~y~I~n~~ns~~vLDv~g 117 (145)
T d1qxma1 80 KTDTNGDNQYWYLLQNYIS-RNVIIRNYMNPNLVLQYNI 117 (145)
T ss_dssp ECCCCCGGGCEEEEECTTT-CCEEEEESSCTTEEEEECT
T ss_pred EcCCCCchheEEEeecCCC-CEEEEEEccCCCEEEEecC
Confidence 8888888999999875433 2356665 3 377777754
|
| >d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Amylase, catalytic domain domain: Maltooligosyl trehalose synthase species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]
Probab=84.46 E-value=0.71 Score=48.08 Aligned_cols=57 Identities=12% Similarity=0.233 Sum_probs=40.1
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCc----------cchHHHHHHHHHHHHHcCCEEEEec
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFV----------GGSLQALDNAFRWAQKYGMKVIVDL 241 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~----------~~~l~~ld~~i~~a~~~Gi~VIldl 241 (535)
.+.+..|+++|+++|=|+=-+.. .|....-|+ -+..+.++++|+.|+++||+||+|+
T Consensus 20 ~~~LpYL~~LGVs~IyLsPi~~a--~~gS~HGYDv~D~~~Vdp~lGt~edf~~LV~aaH~~Gm~VIlDi 86 (653)
T d1iv8a2 20 IDNLWYFKDLGVSHLYLSPVLMA--SPGSNHGYDVIDHSRINDELGGEKEYRRLIETAHTIGLGIIQDI 86 (653)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEE--CTTCSSCCSEEEEEEECTTTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHCCCCEEEECccCCC--CCCCCCCccccCccccchhcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 47788999999999987311111 010000022 1578999999999999999999997
|
| >d1x7fa2 c.1.8.12 (A:1-244) Outer surface protein, N-terminal domain {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: Outer surface protein, N-terminal domain domain: Outer surface protein, N-terminal domain species: Bacillus cereus [TaxId: 1396]
Probab=83.86 E-value=0.62 Score=42.28 Aligned_cols=53 Identities=13% Similarity=0.215 Sum_probs=36.0
Q ss_pred HHHHHHHHHcCCCEEEeCCccccccCCCCCCCCccchHHHHHHHHHHHHHcCCEEEEecCC
Q 046395 183 EEDFKFMSQNGLNAVRIPVGWWIAYDPKPPKPFVGGSLQALDNAFRWAQKYGMKVIVDLHA 243 (535)
Q Consensus 183 e~D~~~ik~~G~N~VRipv~~w~~~~p~~~~~~~~~~l~~ld~~i~~a~~~Gi~VIldlH~ 243 (535)
++-++.+++.|++.|=..+ ..|+.. .+...+.+++++++|+++||+||+|+-.
T Consensus 20 ~~yi~~a~~~Gf~~iFTSL-----~~~e~~---~~~~~~~~~~l~~~a~~~g~~vi~DIsp 72 (244)
T d1x7fa2 20 MAYISAAARHGFSRIFTCL-----LSVNRP---KEEIVAEFKEIINHAKDNNMEVILDVAP 72 (244)
T ss_dssp HHHHHHHHTTTEEEEEEEE-----CCC-----------HHHHHHHHHHHHTTCEEEEEECT
T ss_pred HHHHHHHHHCCCCEEEecC-----ccCCCC---HHHHHHHHHHHHHHHHHCCCEEEEEcCH
Confidence 4567777888988775543 223221 2336789999999999999999999974
|
| >d1qxma2 b.42.2.1 (A:149-286) Hemagglutinin component Ha1 {Clostridium botulinum D phage [TaxId: 29342]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Ricin B-like lectins family: Ricin B-like domain: Hemagglutinin component Ha1 species: Clostridium botulinum D phage [TaxId: 29342]
Probab=83.33 E-value=2.8 Score=33.83 Aligned_cols=85 Identities=14% Similarity=0.172 Sum_probs=62.3
Q ss_pred CCceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecC--CeEEEEee--CCcEEEeecC----CCeEEE
Q 046395 16 DGTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINE--TFYNFRLS--NKQFIGLENQ----GNKLVA 87 (535)
Q Consensus 16 ~~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~--~~~~~~~~--~~~~v~~~~~----~~~~~a 87 (535)
++...+|+++..++.|.+..+.|+.|+.-...- +.-..|++.+.+. +.|.||.. .++-+.+.+. |..|+.
T Consensus 45 ~~~~y~i~~~~~~~~l~~~~~~g~~v~~~~~~~--~~~Q~W~i~~~~~~~g~y~i~~~~~s~~~Ldv~~~~~~nGt~v~~ 122 (138)
T d1qxma2 45 TKSAYTLKCQENNRYLTWIQNSNNYVETYQSTD--SLIQYWNINYLDNDASKYILYNLQDTNRVLDVYNSQIANGTHVIV 122 (138)
T ss_dssp TTTEEEEEETTTTEEEEECCSTTCBEEEECCCS--SGGGCEEEEEETTEEEEEEEEETTCTTEEEEEGGGCCSTTCBEEE
T ss_pred CcCEEEEEeCCCCCEEccccCCCcEEEEEcCCC--ChhcEEEEeccccCCCcEEEEEecCCCccEEECCCCcCCCCEEEE
Confidence 356689999999999999988888888777666 6677888887763 67899853 4666666532 223666
Q ss_pred eccCCCCCCceEEEe
Q 046395 88 VSATEKFPEPFQITR 102 (535)
Q Consensus 88 ~~~~~~~~e~f~~~~ 102 (535)
-...-+..+.|.|.+
T Consensus 123 ~~~~g~~nQ~W~l~~ 137 (138)
T d1qxma2 123 DSYHGNTNQQWIINL 137 (138)
T ss_dssp EECCCSGGGCEEEEE
T ss_pred ECCCCCccceEEEEE
Confidence 666777788887643
|
| >d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Actin-crosslinking proteins family: Fascin domain: Fascin species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.04 E-value=2.5 Score=33.47 Aligned_cols=74 Identities=16% Similarity=0.170 Sum_probs=51.4
Q ss_pred ceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeEEEEeeCCcEEEeecCCCeEEEecc-CCCCCC
Q 046395 18 TQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFYNFRLSNKQFIGLENQGNKLVAVSA-TEKFPE 96 (535)
Q Consensus 18 ~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~a~~~-~~~~~e 96 (535)
....|+ ..+||||.. -| .||.--.. .. -|.|-.. .+.++||-.+|+|++..+..+++.+.+. .||.-|
T Consensus 44 grY~L~-t~~~ryL~~--~G--~Lv~~~~~---~t--~Ftle~~-~G~vA~rD~~G~yL~p~G~~g~Lk~gk~~~~gkdE 112 (119)
T d1dfca2 44 QRYSVQ-TADHRFLRH--DG--RLVARPEP---AT--GYTLEFR-SGKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDE 112 (119)
T ss_dssp SSEEEE-ETTSCEECT--TS--CEESSCCG---GG--CEEEEEC-SSEEEEEESSSCBEEECSSSCCEEECSCSSCCSTT
T ss_pred CEEEEE-eCCCCeECC--CC--cCcccCCC---Cc--EEEEEEe-CCeEEEEcCCCCEEeccCCCceEEcCCCCCCCcee
Confidence 356777 788999984 22 45432221 22 3555544 4679999999999999864577999875 588899
Q ss_pred ceEEEe
Q 046395 97 PFQITR 102 (535)
Q Consensus 97 ~f~~~~ 102 (535)
-|.|.+
T Consensus 113 lF~Le~ 118 (119)
T d1dfca2 113 LFALEQ 118 (119)
T ss_dssp CEEEEE
T ss_pred EEEeec
Confidence 997765
|
| >d2fdbm1 b.42.1.1 (M:34-180) Fibroblast growth factor 8, FGF8 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: beta-Trefoil superfamily: Cytokine family: Fibroblast growth factors (FGF) domain: Fibroblast growth factor 8, FGF8 species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.29 E-value=1.3 Score=36.94 Aligned_cols=77 Identities=13% Similarity=0.183 Sum_probs=54.2
Q ss_pred CceeEEEEeecCcEEEEecCCCceEEeccCCCCCCCCceeEEEEecCCeE-EEEee--CCcEEEeecCCCeEEEeccCCC
Q 046395 17 GTQVQLISTKLKKYLTAENGSETILMANHNSSSTSSWQTFRLWRINETFY-NFRLS--NKQFIGLENQGNKLVAVSATEK 93 (535)
Q Consensus 17 ~~~~~~~~~~~~~~~~a~~~g~~~~~anr~~~~~~~we~f~~~~~~~~~~-~~~~~--~~~~v~~~~~~~~~~a~~~~~~ 93 (535)
|..|.||++..+.|||-..-| .|.+..... .-|....-.+.++.| .|+.. .+.||++..+|-...+.++.++
T Consensus 61 ~g~V~I~gv~s~~YLcmn~~G--~Lyg~~~~~---~~dC~F~E~~~en~Y~~y~S~~~~~~yval~~~G~~r~g~~t~~~ 135 (147)
T d2fdbm1 61 GSRVRVRGAETGLYICMNKKG--KLIAKSNGK---GKDCVFTEIVLENNYTALQNAKYEGWYMAFTRKGRPRKGSKTRQH 135 (147)
T ss_dssp TTEEEEEETTTCCEEEECTTS--CEEEESCCC---SGGGEEEEEECTTSCEEEEESSSTTCBCCBCTTSCBCCGGGCCTT
T ss_pred CCEEEEEEcccccEEEEcCCC--CEEEecccC---CCCceEEEEEccCCCEEEEecCCCCeEEEECCCCcEecCCCCCCC
Confidence 568999999999999998766 577644332 557777777777666 46654 6789999873333556677776
Q ss_pred CCCce
Q 046395 94 FPEPF 98 (535)
Q Consensus 94 ~~e~f 98 (535)
...+.
T Consensus 136 ~~~~~ 140 (147)
T d2fdbm1 136 QREVH 140 (147)
T ss_dssp SGGGC
T ss_pred Cccee
Confidence 55543
|