Citrus Sinensis ID: 046457

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------6
Protein Sequence
MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHcccccccEEEEEcccccccccHHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MAFRSVPISFITVLLLFffpvsrsipfivlhgigdqcsnqgVKQFTEnlssfsgskgyc
Flexible Loop (DISEMBL)
MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTenlssfsgskgyc
Low Complexity Region (SEG)
MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC
Disordered region (IsUnstruct)
****SVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQG******************
Disordered Region (DISOPRED)
******PISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFS*****C
Disordered Region (DISEMBL)
MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLS*********
Disordered Region (DISPRO)
*AFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSG*****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	59
388504038	214	unknown [Lotus japonicus]	0.915	0.252	0.690	3e-14
388508794	174	unknown [Lotus japonicus]	0.915	0.310	0.690	5e-14
255541072	335	Palmitoyl-protein thioesterase 1 precurs	0.932	0.164	0.566	4e-12
118483969	366	unknown [Populus trichocarpa]	1.0	0.161	0.616	5e-12
224138676	341	predicted protein [Populus trichocarpa]	1.0	0.173	0.616	5e-12
356497117	367	PREDICTED: palmitoyl-protein thioesteras	0.881	0.141	0.653	6e-12
224074193	352	predicted protein [Populus trichocarpa]	1.0	0.167	0.6	2e-11
118482307	394	unknown [Populus trichocarpa]	1.0	0.149	0.6	2e-11
356540546	310	PREDICTED: LOW QUALITY PROTEIN: palmitoy	0.728	0.138	0.767	3e-11
297817334	338	palmitoyl protein thioesterase family pr	0.966	0.168	0.593	2e-10

>gi|388504038|gb|AFK40085.1| unknown [Lotus japonicus]

 Score = 82.4 bits (202), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 48/55 (87%), Gaps = 1/55 (1%)

Query: 6  VPISFITVLLLF-FFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          +P+S ++ L +F FFP+S SIPFIVLHGIGDQCSN GVK+FTE LS++SG+KGYC
Sbjct: 1  MPLSSLSFLFIFTFFPISHSIPFIVLHGIGDQCSNHGVKRFTEELSTYSGAKGYC 55

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388508794|gb|AFK42463.1| unknown [Lotus japonicus]

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 48/55 (87%), Gaps = 1/55 (1%)

Query: 6  VPISFITVLLLF-FFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          +P+S ++ L +F FFP+S SIPFIVLHGIGDQCSN GVK+FTE LS++SG+KGYC
Sbjct: 1  MPLSSLSFLFIFTFFPISHSIPFIVLHGIGDQCSNHGVKRFTEELSTYSGAKGYC 55

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541072|ref|XP_002511600.1| Palmitoyl-protein thioesterase 1 precursor, putative [Ricinus communis] gi|223548780|gb|EEF50269.1| Palmitoyl-protein thioesterase 1 precursor, putative [Ricinus communis]

 Score = 75.5 bits (184), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/60 (56%), Positives = 46/60 (76%), Gaps = 5/60 (8%)

Query: 5  SVPISFITVLLLFFF-----PVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          S+PISFI V++  FF     P++ S+PFIVLHGIGD+CSN+G+  FTE L ++SG+ GYC
Sbjct: 3  SIPISFINVIVTLFFTFTLIPLTHSVPFIVLHGIGDKCSNRGISHFTELLGNWSGAPGYC 62

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118483969|gb|ABK93872.1| unknown [Populus trichocarpa]

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 1  MAFRSVPISFITVLLLFFF-PVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          MAF     +F+ V+ +F   PV+ S+PFIVLHGIGDQC N+GVKQFTE L++FSGS GYC
Sbjct: 1  MAFLFPYFAFLFVVFIFVIDPVAHSLPFIVLHGIGDQCKNRGVKQFTEELTNFSGSPGYC 60

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224138676|ref|XP_002326662.1| predicted protein [Populus trichocarpa] gi|222833984|gb|EEE72461.1| predicted protein [Populus trichocarpa]

 Score = 75.1 bits (183), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 37/60 (61%), Positives = 46/60 (76%), Gaps = 1/60 (1%)

Query: 1  MAFRSVPISFITVLLLFFF-PVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          MAF     +F+ V+ +F   PV+ S+PFIVLHGIGDQC N+GVKQFTE L++FSGS GYC
Sbjct: 1  MAFLFPYFAFLFVVFIFVIDPVAHSLPFIVLHGIGDQCKNRGVKQFTEELTNFSGSPGYC 60

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356497117|ref|XP_003517409.1| PREDICTED: palmitoyl-protein thioesterase 1-like [Glycine max]

 Score = 74.7 bits (182), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 34/52 (65%), Positives = 43/52 (82%)

Query: 8  ISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          +SF+ +   F   VS SIPFIV+HGIGDQCSN+GVK+FT+ LSSFSG++GYC
Sbjct: 6  LSFLFIFTSFIVSVSHSIPFIVIHGIGDQCSNRGVKKFTQQLSSFSGAEGYC 57

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074193|ref|XP_002304295.1| predicted protein [Populus trichocarpa] gi|222841727|gb|EEE79274.1| predicted protein [Populus trichocarpa]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)

Query: 1  MAFRSVPISFITVLLLFFF-PVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          M F    I F+ + L+F   PV+ S+PFIVLHGIGDQC N+GVK FTE L+S SGS GYC
Sbjct: 1  MPFHCPCIVFLFIFLIFVIKPVAHSLPFIVLHGIGDQCKNRGVKHFTEELTSISGSPGYC 60

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118482307|gb|ABK93080.1| unknown [Populus trichocarpa]

 Score = 73.2 bits (178), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/60 (60%), Positives = 43/60 (71%), Gaps = 1/60 (1%)

Query: 1   MAFRSVPISFITVLLLFFF-PVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
           M F    I F+ + L+F   PV+ S+PFIVLHGIGDQC N+GVK FTE L+S SGS GYC
Sbjct: 43  MPFHCPCIVFLFIFLIFVIKPVAHSLPFIVLHGIGDQCKNRGVKHFTEELTSISGSPGYC 102

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356540546|ref|XP_003538749.1| PREDICTED: LOW QUALITY PROTEIN: palmitoyl-protein thioesterase 1-like [Glycine max]

 Score = 72.4 bits (176), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/43 (76%), Positives = 39/43 (90%)

Query: 16 LFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGY 58
          LF F VS SIPFIV+HGIGDQCSN+GVK+FT+ LSSFSG++GY
Sbjct: 9  LFIFSVSHSIPFIVIHGIGDQCSNRGVKKFTQQLSSFSGAEGY 51

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817334|ref|XP_002876550.1| palmitoyl protein thioesterase family protein [Arabidopsis lyrata subsp. lyrata] gi|297322388|gb|EFH52809.1| palmitoyl protein thioesterase family protein [Arabidopsis lyrata subsp. lyrata]

 Score = 70.1 bits (170), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/59 (59%), Positives = 42/59 (71%), Gaps = 2/59 (3%)

Query: 1  MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          MAF    I  I  L+  F  ++ S+PFIVLHGIGD+CSN GV QFTE LS +SGS+GYC
Sbjct: 1  MAFLKAAI--IVALICNFVSLASSVPFIVLHGIGDKCSNAGVTQFTELLSDWSGSQGYC 57

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	59
TAIR|locus:2081942	338	AT3G60340 [Arabidopsis thalian	0.864	0.150	0.607	8.3e-12
TAIR|locus:2129086	300	AT4G17483 [Arabidopsis thalian	0.932	0.183	0.543	2.1e-10
TAIR|locus:2129076	304	AT4G17480 [Arabidopsis thalian	0.830	0.161	0.571	3.7e-10
TAIR|locus:2171554	314	AT5G47330 [Arabidopsis thalian	0.830	0.156	0.510	3e-07
TAIR|locus:2129066	308	AT4G17470 [Arabidopsis thalian	0.864	0.165	0.452	4.8e-07
TAIR|locus:2171564	317	AT5G47340 [Arabidopsis thalian	0.830	0.154	0.448	3e-06
TAIR|locus:2171599	316	AT5G47350 [Arabidopsis thalian	0.830	0.155	0.428	0.00017

TAIR|locus:2081942 AT3G60340 [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 8.3e-12, P = 8.3e-12
 Identities = 31/51 (60%), Positives = 39/51 (76%)

Query:     9 SFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
             + I  L+  F  ++ S+PFIVLHGIGD+CSN GV QFTE LS +SGS+GYC
Sbjct:     7 TIIVALICNFASLASSVPFIVLHGIGDKCSNAGVTQFTELLSDWSGSQGYC 57

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0008474 "palmitoyl-(protein) hydrolase activity" evidence=IEA;ISS

GO:0005773 "vacuole" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2129086 AT4G17483 [Arabidopsis thaliana (taxid:3702)]

 Score = 151 (58.2 bits), Expect = 2.1e-10, P = 2.1e-10
 Identities = 31/57 (54%), Positives = 40/57 (70%)

Query:     4 RSVPISFITVLLLF-FFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
             RS+ +S +   +LF   PVS SIPFI+ HGIGD+CS  GV  FT+ L++ SGS GYC
Sbjct:     7 RSILLSTVVAAVLFSLIPVSISIPFILFHGIGDKCSG-GVSNFTQLLTNLSGSPGYC 62

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0008474 "palmitoyl-(protein) hydrolase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2129076 AT4G17480 [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 28/49 (57%), Positives = 34/49 (69%)

Query:    11 ITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
             +T+ L FF PVS S+PFI+ HGI DQCSN GV  F + LS+ S S G C
Sbjct:    12 VTLTLFFFIPVSISVPFILFHGIRDQCSNGGVSSFVQLLSNLSSSHGSC 60

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0008474 "palmitoyl-(protein) hydrolase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2171554 AT5G47330 [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 25/49 (51%), Positives = 32/49 (65%)

Query:    11 ITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
             + V LL    VS S+PFI+LHGI  QCSN     FT+ L++ SGS G+C
Sbjct:    13 VVVALLAMVHVSVSVPFIMLHGISAQCSNARDANFTQLLTNLSGSPGFC 61

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0008474 "palmitoyl-(protein) hydrolase activity" evidence=IEA;ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2129066 AT4G17470 [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 24/53 (45%), Positives = 32/53 (60%)

Query:     9 SFITVLLLFFF--PVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
             + +  L LFFF  PVS S+PF++ HG G +CSN  V   T+ L + SG  G C
Sbjct:     9 ALLVTLSLFFFSIPVSLSVPFVLFHGFGGECSNDKVSNLTQFLINHSGYPGTC 61

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0008474 "palmitoyl-(protein) hydrolase activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

TAIR|locus:2171564 AT5G47340 [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query:    11 ITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
             + V  L    +S S+PFI+LHGI  QCS+     FT+ L++ SGS G+C
Sbjct:    12 VVVAFLAKVDISVSVPFIMLHGIASQCSDDTNANFTQLLTNLSGSPGFC 60

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0008474 "palmitoyl-(protein) hydrolase activity" evidence=IEA;ISS

TAIR|locus:2171599 AT5G47350 [Arabidopsis thaliana (taxid:3702)]

 Score = 98 (39.6 bits), Expect = 0.00017, P = 0.00017
 Identities = 21/49 (42%), Positives = 28/49 (57%)

Query:    11 ITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
             + V  L    VS S+PF+V   IG QCS+     FT+ LS+ S S G+C
Sbjct:    12 VVVAFLAMVHVSVSVPFVVFPEIGTQCSDAPNANFTQLLSNLSSSPGFC 60


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.330   0.143   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       59        59   0.00091  102 3  11 22  0.42    27
                                                     29  0.49    27


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  446 (48 KB)
  Total size of DFA:  73 KB (2061 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.08u 0.16s 7.24t   Elapsed:  00:00:00
  Total cpu time:  7.09u 0.16s 7.25t   Elapsed:  00:00:00
  Start:  Sat May 11 12:51:47 2013   End:  Sat May 11 12:51:47 2013

GO:0005576 "extracellular region" evidence=ISM

GO:0006464 "cellular protein modification process" evidence=IEA

GO:0008474 "palmitoyl-(protein) hydrolase activity" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.29.301.1	hypothetical protein (325 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.148.177.1	SubName- Full=Putative uncharacterized protein; (342 aa)						•			0.899
	gw1.X.5990.1	long-chain acyl-CoA synthetase (EC-6.2.1.3) (705 aa)						•			0.800
	gw1.II.706.1	long-chain-fatty-acid-CoA ligase (EC-6.2.1.3) (652 aa)						•			0.800
	gw1.I.3316.1	hypothetical protein (685 aa)						•			0.800
	grail3.0003071602	long-chain-fatty-acid-CoA ligase family protein (EC-6.2.1.3) (641 aa)						•			0.800
	eugene3.00130195	long-chain acyl-CoA synthetase (EC-6.2.1.3) (696 aa)						•			0.800
	estExt_fgenesh4_pm.C_LG_XIV0485	long-chain-fatty-acid-CoA ligase family protein (EC-6.2.1.3) (679 aa)						•			0.800
	estExt_fgenesh4_pm.C_LG_IX0278	long-chain-fatty-acid-CoA ligase (EC-6.2.1.3) (658 aa)						•			0.800
	estExt_fgenesh4_pm.C_880012	hypothetical protein (706 aa)						•			0.800
	estExt_fgenesh4_pg.C_LG_III1161	hypothetical protein (662 aa)						•			0.800

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	59
PLN02606	306	PLN02606, PLN02606, palmitoyl-protein thioesterase	1e-13
PLN02633	314	PLN02633, PLN02633, palmitoyl protein thioesterase	3e-11

>gnl|CDD|215326 PLN02606, PLN02606, palmitoyl-protein thioesterase

 Score = 62.3 bits (151), Expect = 1e-13
 Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 10 FITVLLLFFF-PVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
           +T+ L FF  PVS S+PF++ HG G +CSN  V   T+ L + SG  G C
Sbjct: 11 LVTLSLFFFSIPVSLSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTC 61

Length = 306

>gnl|CDD|178240 PLN02633, PLN02633, palmitoyl protein thioesterase family protein

 Score = 55.6 bits (134), Expect = 3e-11
 Identities = 24/49 (48%), Positives = 32/49 (65%)

Query: 11 ITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC 59
          + V  L    VS S+PFI+LHGIG QCS+     FT+ L++ SGS G+C
Sbjct: 12 VVVAFLAMVHVSVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFC 60

Length = 314

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	59
PLN02633	314	palmitoyl protein thioesterase family protein	99.78
PLN02606	306	palmitoyl-protein thioesterase	99.63
PF02089	279	Palm_thioest: Palmitoyl protein thioesterase; Inte	99.61
KOG2541	296	consensus Palmitoyl protein thioesterase [Lipid tr	99.59
PF12695	145	Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3	84.79
PF02230	216	Abhydrolase_2: Phospholipase/Carboxylesterase; Int	83.38
TIGR02240	276	PHA_depoly_arom poly(3-hydroxyalkanoate) depolymer	82.03
PRK11460	232	putative hydrolase; Provisional	81.04

>PLN02633 palmitoyl protein thioesterase family protein

Probab=99.78  E-value=1.2e-19  Score=131.72  Aligned_cols=57  Identities=46%  Similarity=0.743  Sum_probs=47.0

Q ss_pred             CCcccchHHHHHHHHHHHcccccCcceeEeeCCCCCCCChhHHHHHHHHhhccCCceeC
Q 046457            1 MAFRSVPISFITVLLLFFFPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC   59 (59)
Q Consensus         1 ~~~~~~~~~~v~~~~~~~~~~~~~~PvViwHGlGDsC~n~gm~~~~~ll~~~~G~yv~c   59 (59)
                      |++|+.-+++  ..++.+++++.++|+|+||||||+|||+||++|+++++++.|+|++|
T Consensus         4 ~~~~~~~~~~--~~~~~~~~~~~~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~   60 (314)
T PLN02633          4 GLKRSCVMVV--VAFLAMVHVSVSVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFC   60 (314)
T ss_pred             cccchhhhHH--HHHHHhccccCCCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEE
Confidence            3555333333  33458899999999999999999999999999999998877999997

>PLN02606 palmitoyl-protein thioesterase

Probab=99.63  E-value=3.5e-16  Score=113.37  Aligned_cols=44  Identities=48%  Similarity=0.946  Sum_probs=38.5

Q ss_pred             HHH-cccccCcceeEeeCCCCCCCChhHHHHHHHHhhccCCceeC
Q 046457           16 LFF-FPVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC   59 (59)
Q Consensus        16 ~~~-~~~~~~~PvViwHGlGDsC~n~gm~~~~~ll~~~~G~yv~c   59 (59)
                      +.+ ++.++++|+|+||||||+|+|+||++++++|+++.|+|++|
T Consensus        17 ~~~~~~~~~~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~   61 (306)
T PLN02606         17 FFFSIPVSLSVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTC   61 (306)
T ss_pred             HHhccccCCCCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEE
Confidence            344 66678999999999999999999999999997766888876

>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children

Probab=99.61  E-value=2.7e-16  Score=112.52  Aligned_cols=38  Identities=24%  Similarity=0.546  Sum_probs=26.5

Q ss_pred             ccCcceeEeeCCCCCCCCh-hHHHHHHHHhhcc-CCceeC
Q 046457           22 SRSIPFIVLHGIGDQCSNQ-GVKQFTENLSSFS-GSKGYC   59 (59)
Q Consensus        22 ~~~~PvViwHGlGDsC~n~-gm~~~~~ll~~~~-G~yv~c   59 (59)
                      ++++|+||||||||+|||+ ||+.++++|++.+ |+||||
T Consensus         3 ~~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~s   42 (279)
T PF02089_consen    3 PSPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHS   42 (279)
T ss_dssp             TSS--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE
T ss_pred             CCCCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEE
Confidence            6789999999999999998 9999999999999 999996

Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.

>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.59  E-value=1.5e-15  Score=110.08  Aligned_cols=52  Identities=38%  Similarity=0.680  Sum_probs=43.8

Q ss_pred             HHHHHH-HHHHHcccccC-cceeEeeCCCCCCCChhHHHHHHHHhhccCCceeC
Q 046457            8 ISFITV-LLLFFFPVSRS-IPFIVLHGIGDQCSNQGVKQFTENLSSFSGSKGYC   59 (59)
Q Consensus         8 ~~~v~~-~~~~~~~~~~~-~PvViwHGlGDsC~n~gm~~~~~ll~~~~G~yv~c   59 (59)
                      +++++. .++++++.+.+ +|+|+||||||+|+|-+|++++|+++|+.|+||+|
T Consensus         5 ~~~~l~~~~~~~~~~s~s~~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~   58 (296)
T KOG2541|consen    5 ALVVLLLPFLALIHVSPSPVPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYC   58 (296)
T ss_pred             hhHHHHHHHHHhcccCcccCCEEEEeccCcccccchHHHHHHHHHhCCCCeeEE
Confidence            334333 34677777777 99999999999999999999999999966999998

>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A

Probab=84.79  E-value=1.6  Score=25.51  Aligned_cols=25  Identities=24%  Similarity=0.476  Sum_probs=19.6

Q ss_pred             ceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           26 PFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        26 PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      |+|+.||.|.+  ...+..+.+.+.+.
T Consensus         1 ~vv~~HG~~~~--~~~~~~~~~~l~~~   25 (145)
T PF12695_consen    1 VVVLLHGWGGS--RRDYQPLAEALAEQ   25 (145)
T ss_dssp             EEEEECTTTTT--THHHHHHHHHHHHT
T ss_pred             CEEEECCCCCC--HHHHHHHHHHHHHC
Confidence            78999999985  44677888777765

...

>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases

Probab=83.38  E-value=0.95  Score=29.57  Aligned_cols=23  Identities=35%  Similarity=0.586  Sum_probs=11.4

Q ss_pred             cCcc-eeEeeCCCCCCCChhHHHHHH
Q 046457           23 RSIP-FIVLHGIGDQCSNQGVKQFTE   47 (59)
Q Consensus        23 ~~~P-vViwHGlGDsC~n~gm~~~~~   47 (59)
                      ...| +|+.||.||+.  ..+....+
T Consensus        12 ~~~~lvi~LHG~G~~~--~~~~~~~~   35 (216)
T PF02230_consen   12 KAKPLVILLHGYGDSE--DLFALLAE   35 (216)
T ss_dssp             T-SEEEEEE--TTS-H--HHHHHHHH
T ss_pred             CCceEEEEECCCCCCc--chhHHHHh
Confidence            3345 45669999997  45555444

; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.

>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase

Probab=82.03  E-value=1.4  Score=29.12  Aligned_cols=27  Identities=30%  Similarity=0.512  Sum_probs=17.1

Q ss_pred             cCcceeEeeCCCCCCCChhHHHHHHHHhh
Q 046457           23 RSIPFIVLHGIGDQCSNQGVKQFTENLSS   51 (59)
Q Consensus        23 ~~~PvViwHGlGDsC~n~gm~~~~~ll~~   51 (59)
                      ...|+|++||+|++..  -...+.+.+.+
T Consensus        24 ~~~plvllHG~~~~~~--~w~~~~~~L~~   50 (276)
T TIGR02240        24 GLTPLLIFNGIGANLE--LVFPFIEALDP   50 (276)
T ss_pred             CCCcEEEEeCCCcchH--HHHHHHHHhcc
Confidence            3479999999998754  22344444443

This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.

>PRK11460 putative hydrolase; Provisional

Probab=81.04  E-value=2.6  Score=28.18  Aligned_cols=25  Identities=16%  Similarity=0.399  Sum_probs=18.4

Q ss_pred             ceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           26 PFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        26 PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      .+|+.||.|++-  ..+..+.+.+.+.
T Consensus        18 ~vIlLHG~G~~~--~~~~~l~~~l~~~   42 (232)
T PRK11460         18 LLLLFHGVGDNP--VAMGEIGSWFAPA   42 (232)
T ss_pred             EEEEEeCCCCCh--HHHHHHHHHHHHH
Confidence            488899999983  3577777777653

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	59
1ei9_A	279	Palmitoyl protein thioesterase 1; alpha/beta hydro	1e-05

>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A Length = 279

 Score = 39.2 bits (91), Expect = 1e-05
 Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 2/40 (5%)

Query: 22 SRSIPFIVLHGIGDQCSNQGVKQFTENL--SSFSGSKGYC 59
             +P ++ HG+GD C N       + +      G     
Sbjct: 3  PAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLS 42

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	59
1ei9_A	279	Palmitoyl protein thioesterase 1; alpha/beta hydro	98.0
1pja_A	302	Palmitoyl-protein thioesterase 2 precursor; hydrol	92.48
4fhz_A	285	Phospholipase/carboxylesterase; alpha/beta hydrola	90.85
3ds8_A	254	LIN2722 protein; unkonwn function, structural geno	87.97
2qjw_A	176	Uncharacterized protein XCC1541; putative hydrolas	87.91
3pfb_A	270	Cinnamoyl esterase; alpha/beta hydrolase fold, hyd	83.5
4fbl_A	281	LIPS lipolytic enzyme; thermostable, structural ge	83.39
1uxo_A	192	YDEN protein; hydrolase, A/B hydrolase, esterase,	83.39
2wtm_A	251	EST1E; hydrolase; 1.60A {Clostridium proteoclastic	82.5
1isp_A	181	Lipase; alpha/beta hydrolase fold, hydrolase; 1.30	82.41
2x5x_A	342	PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE	82.35
2qs9_A	194	Retinoblastoma-binding protein 9; B5T overexpresse	81.36
4ao6_A	259	Esterase; hydrolase, thermo label; 1.60A {Unidenti	80.1

>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A

Probab=98.00  E-value=4.6e-06  Score=55.81  Aligned_cols=37  Identities=22%  Similarity=0.539  Sum_probs=31.3

Q ss_pred             ccCcceeEeeCCCCCCCCh-hHHHHHHHHhhcc-CCcee
Q 046457           22 SRSIPFIVLHGIGDQCSNQ-GVKQFTENLSSFS-GSKGY   58 (59)
Q Consensus        22 ~~~~PvViwHGlGDsC~n~-gm~~~~~ll~~~~-G~yv~   58 (59)
                      +.+.|+|++||+||+++++ .+..+.+.+++.+ |..|+
T Consensus         3 ~~~~pvVllHG~~~~~~~~~~~~~~~~~L~~~~~g~~v~   41 (279)
T 1ei9_A            3 PAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVL   41 (279)
T ss_dssp             TSSCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEE
T ss_pred             CCCCcEEEECCCCCCCCCcccHHHHHHHHHHHCCCcEEE
Confidence            4578999999999999875 8999999999876 76664

>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13

Probab=92.48  E-value=0.12  Score=32.34  Aligned_cols=28  Identities=25%  Similarity=0.418  Sum_probs=20.6

Q ss_pred             cCcceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           23 RSIPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        23 ~~~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      ...|+|+.||.|++..  ....+.+.+.+.
T Consensus        35 ~~~~vvllHG~~~~~~--~~~~~~~~L~~~   62 (302)
T 1pja_A           35 SYKPVIVVHGLFDSSY--SFRHLLEYINET   62 (302)
T ss_dssp             CCCCEEEECCTTCCGG--GGHHHHHHHHHH
T ss_pred             CCCeEEEECCCCCChh--HHHHHHHHHHhc
Confidence            4478999999998643  466777777665

>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*

Probab=90.85  E-value=0.13  Score=34.45  Aligned_cols=30  Identities=20%  Similarity=0.392  Sum_probs=19.4

Q ss_pred             ccCccee-EeeCCCCCCCChhHHHHHHHHhhcc
Q 046457           22 SRSIPFI-VLHGIGDQCSNQGVKQFTENLSSFS   53 (59)
Q Consensus        22 ~~~~PvV-iwHGlGDsC~n~gm~~~~~ll~~~~   53 (59)
                      ..+.|+| ++||.||+-  .++..+.+.+.+..
T Consensus        63 ~~~~plVI~LHG~G~~~--~~~~~~~~~l~~~~   93 (285)
T 4fhz_A           63 GEATSLVVFLHGYGADG--ADLLGLAEPLAPHL   93 (285)
T ss_dssp             TCCSEEEEEECCTTBCH--HHHHTTHHHHGGGS
T ss_pred             CCCCcEEEEEcCCCCCH--HHHHHHHHHHHHhC
Confidence            3446755 569999863  36667777776554

>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}

Probab=87.97  E-value=0.47  Score=30.23  Aligned_cols=28  Identities=29%  Similarity=0.618  Sum_probs=20.2

Q ss_pred             cCcceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           23 RSIPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        23 ~~~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      ...|+|+.||+|.+...  ...+.+.+++.
T Consensus         2 ~~~pvvllHG~~~~~~~--~~~l~~~L~~~   29 (254)
T 3ds8_A            2 DQIPIILIHGSGGNASS--LDKMADQLMNE   29 (254)
T ss_dssp             CCCCEEEECCTTCCTTT--THHHHHHHHHT
T ss_pred             CCCCEEEECCCCCCcch--HHHHHHHHHHh
Confidence            35799999999988654  55666666653

>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}

Probab=87.91  E-value=0.75  Score=26.27  Aligned_cols=27  Identities=19%  Similarity=0.218  Sum_probs=18.4

Q ss_pred             ceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           26 PFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        26 PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      ++|+.||.|.+-.+..+..+.+.+.+.
T Consensus         6 ~vv~~HG~~~~~~~~~~~~~~~~l~~~   32 (176)
T 2qjw_A            6 HCILAHGFESGPDALKVTALAEVAERL   32 (176)
T ss_dssp             EEEEECCTTCCTTSHHHHHHHHHHHHT
T ss_pred             EEEEEeCCCCCccHHHHHHHHHHHHHC
Confidence            488899999765544555666666553

>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*

Probab=83.50  E-value=1.3  Score=26.67  Aligned_cols=28  Identities=14%  Similarity=0.222  Sum_probs=20.3

Q ss_pred             cceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           25 IPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        25 ~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      .++|+.||.|.+....-...+.+.+.+.
T Consensus        47 p~vv~~HG~~~~~~~~~~~~~~~~l~~~   74 (270)
T 3pfb_A           47 DMAIIFHGFTANRNTSLLREIANSLRDE   74 (270)
T ss_dssp             EEEEEECCTTCCTTCHHHHHHHHHHHHT
T ss_pred             CEEEEEcCCCCCccccHHHHHHHHHHhC
Confidence            4589999999886555677777766553

>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A

Probab=83.39  E-value=0.92  Score=28.77  Aligned_cols=26  Identities=19%  Similarity=0.332  Sum_probs=18.6

Q ss_pred             cceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           25 IPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        25 ~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      .+||+.||+|++-.  .+..+.+.+.+.
T Consensus        52 ~~VlllHG~~~s~~--~~~~la~~La~~   77 (281)
T 4fbl_A           52 IGVLVSHGFTGSPQ--SMRFLAEGFARA   77 (281)
T ss_dssp             EEEEEECCTTCCGG--GGHHHHHHHHHT
T ss_pred             ceEEEECCCCCCHH--HHHHHHHHHHHC
Confidence            45999999998632  567777766653

>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31

Probab=83.39  E-value=1.3  Score=25.73  Aligned_cols=25  Identities=16%  Similarity=0.293  Sum_probs=16.4

Q ss_pred             cc-eeEeeCCCCCCCChhHHHHHHHH
Q 046457           25 IP-FIVLHGIGDQCSNQGVKQFTENL   49 (59)
Q Consensus        25 ~P-vViwHGlGDsC~n~gm~~~~~ll   49 (59)
                      .| +|+.||.|.+..+.-...+.+.+
T Consensus         4 ~p~vv~~HG~~~~~~~~~~~~~~~~l   29 (192)
T 1uxo_A            4 TKQVYIIHGYRASSTNHWFPWLKKRL   29 (192)
T ss_dssp             CCEEEEECCTTCCTTSTTHHHHHHHH
T ss_pred             CCEEEEEcCCCCCcchhHHHHHHHHH
Confidence            46 99999999886633334444434

>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*

Probab=82.50  E-value=1.4  Score=26.86  Aligned_cols=26  Identities=19%  Similarity=0.416  Sum_probs=18.5

Q ss_pred             ceeEeeCCCCCCCChhHHHHHHHHhh
Q 046457           26 PFIVLHGIGDQCSNQGVKQFTENLSS   51 (59)
Q Consensus        26 PvViwHGlGDsC~n~gm~~~~~ll~~   51 (59)
                      |+|+.||.|.+........+.+.+.+
T Consensus        29 ~vvl~HG~~~~~~~~~~~~~~~~l~~   54 (251)
T 2wtm_A           29 LCIIIHGFTGHSEERHIVAVQETLNE   54 (251)
T ss_dssp             EEEEECCTTCCTTSHHHHHHHHHHHH
T ss_pred             EEEEEcCCCcccccccHHHHHHHHHH
Confidence            48899999987445566666666654

>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A

Probab=82.41  E-value=1.4  Score=25.60  Aligned_cols=27  Identities=26%  Similarity=0.450  Sum_probs=18.3

Q ss_pred             cCcceeEeeCCCCCCCChhHHHHHHHHhh
Q 046457           23 RSIPFIVLHGIGDQCSNQGVKQFTENLSS   51 (59)
Q Consensus        23 ~~~PvViwHGlGDsC~n~gm~~~~~ll~~   51 (59)
                      ...|+|+.||.|.+-  ..+..+.+.+.+
T Consensus         2 ~~~~vv~~HG~~~~~--~~~~~~~~~l~~   28 (181)
T 1isp_A            2 EHNPVVMVHGIGGAS--FNFAGIKSYLVS   28 (181)
T ss_dssp             CCCCEEEECCTTCCG--GGGHHHHHHHHH
T ss_pred             CCCeEEEECCcCCCH--hHHHHHHHHHHH
Confidence            346899999999653  345566666654

>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A

Probab=82.35  E-value=0.8  Score=31.84  Aligned_cols=17  Identities=35%  Similarity=0.696  Sum_probs=13.6

Q ss_pred             ccCcceeEeeCCCCCCC
Q 046457           22 SRSIPFIVLHGIGDQCS   38 (59)
Q Consensus        22 ~~~~PvViwHGlGDsC~   38 (59)
                      ....|+|+.||++++..
T Consensus        38 ~~~~pVVlvHG~~~~~~   54 (342)
T 2x5x_A           38 ATKTPVIFIHGNGDNAI   54 (342)
T ss_dssp             CCSCCEEEECCTTCCGG
T ss_pred             CCCCeEEEECCcCCCcc
Confidence            34589999999999753

>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}

Probab=81.36  E-value=2  Score=25.17  Aligned_cols=29  Identities=10%  Similarity=0.067  Sum_probs=18.5

Q ss_pred             cCcceeEeeCCCCCCC--ChhHHHHHHHHhh
Q 046457           23 RSIPFIVLHGIGDQCS--NQGVKQFTENLSS   51 (59)
Q Consensus        23 ~~~PvViwHGlGDsC~--n~gm~~~~~ll~~   51 (59)
                      ...|+|+.||.|.+..  ......+.+.+.+
T Consensus         3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~   33 (194)
T 2qs9_A            3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEK   33 (194)
T ss_dssp             CCCEEEEECCSSSSCTTTSTTHHHHHHHHTT
T ss_pred             CCCEEEEECCCCCCCcccchHHHHHHHHHhh
Confidence            3467999999998752  2233335666665

>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A

Probab=80.10  E-value=1.4  Score=27.87  Aligned_cols=30  Identities=20%  Similarity=0.212  Sum_probs=14.7

Q ss_pred             ccCcceeEe-eCCCCCCCChhHHHHHHHHhh
Q 046457           22 SRSIPFIVL-HGIGDQCSNQGVKQFTENLSS   51 (59)
Q Consensus        22 ~~~~PvViw-HGlGDsC~n~gm~~~~~ll~~   51 (59)
                      ..+.|+|++ ||.|.+-.++.+..+.+.+.+
T Consensus        53 ~~~~p~Vl~~HG~g~~~~~~~~~~~a~~la~   83 (259)
T 4ao6_A           53 GSSDRLVLLGHGGTTHKKVEYIEQVAKLLVG   83 (259)
T ss_dssp             SCCSEEEEEEC--------CHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcccccchHHHHHHHHHHH
Confidence            355776665 999877666677777776654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	59
d1ei9a_	279	c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {C	0.001

>d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]} Length = 279

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Palmitoyl protein thioesterase 1
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 32.2 bits (73), Expect = 0.001
 Identities = 10/42 (23%), Positives = 16/42 (38%), Gaps = 6/42 (14%)

Query: 22 SRSIPFIVLHGIGDQCSN----QGVKQFTENLSSFSGSKGYC 59
             +P ++ HG+GD C N      +K+  E      G     
Sbjct: 3  PAPLPLVIWHGMGDSCCNPLSMGAIKKMVE--KKIPGIHVLS 42

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	59
d1ei9a_	279	Palmitoyl protein thioesterase 1 {Cow (Bos taurus)	99.12
d1pjaa_	268	Palmitoyl protein thioesterase 2 {Human (Homo sapi	96.5
d1ispa_	179	Lipase A {Bacillus subtilis [TaxId: 1423]}	93.44
d1uxoa_	186	Hypothetical protein YdeN {Bacillus subtilis [TaxI	92.3
d1tqha_	242	Carboxylesterase Est {Bacillus stearothermophilus	91.77
d1xkta_	286	Fatty acid synthase {Human (Homo sapiens) [TaxId:	91.29
d1auoa_	218	Carboxylesterase {Pseudomonas fluorescens [TaxId:	88.89
d1j1ia_	268	Meta cleavage compound hydrolase CarC {Janthinobac	87.69
d1c4xa_	281	2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolas	87.62
d1m33a_	256	Biotin biosynthesis protein BioH {Escherichia coli	87.44
d1qlwa_	318	A novel bacterial esterase {Alcaligenes sp. [TaxId	87.24
d1uk8a_	271	Meta-cleavage product hydrolase CumD {Pseudomonas	87.0
d1tcaa_	317	Triacylglycerol lipase {Yeast (Candida antarctica)	86.65
d1wm1a_	313	Proline aminopeptidase {Serratia marcescens [TaxId	86.3
d1r3da_	264	Hypothetical protein VC1974 {Vibrio cholerae [TaxI	83.23
d1xkla_	258	Salicylic acid-binding protein 2 (SABP2) {Common t	82.16
d1a88a_	275	Chloroperoxidase L {Streptomyces lividans [TaxId:	80.83
d1a8qa_	274	Bromoperoxidase A1 {Streptomyces aureofaciens [Tax	80.64
d1a8sa_	273	Chloroperoxidase F {Pseudomonas fluorescens [TaxId	80.06

>d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Palmitoyl protein thioesterase 1
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.12  E-value=1.4e-11  Score=84.42  Aligned_cols=38  Identities=21%  Similarity=0.526  Sum_probs=35.1

Q ss_pred             ccCcceeEeeCCCCCCCCh-hHHHHHHHHhhcc-CCceeC
Q 046457           22 SRSIPFIVLHGIGDQCSNQ-GVKQFTENLSSFS-GSKGYC   59 (59)
Q Consensus        22 ~~~~PvViwHGlGDsC~n~-gm~~~~~ll~~~~-G~yv~c   59 (59)
                      ..|+|||+|||+||+|+++ +|+.++++|++.. |++|+|
T Consensus         3 ~~P~PVVLvHGlg~s~~~~~~m~~l~~~l~~~~pG~~V~~   42 (279)
T d1ei9a_           3 PAPLPLVIWHGMGDSCCNPLSMGAIKKMVEKKIPGIHVLS   42 (279)
T ss_dssp             TSSCCEEEECCTTCCSCCTTTTHHHHHHHHHHSTTCCEEE
T ss_pred             CCCCcEEEECCCCCCCCChHHHHHHHHHHHHHCCCeEEEE
Confidence            5689999999999999998 9999999999998 999875

>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterases
domain: Palmitoyl protein thioesterase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.50  E-value=0.0011  Score=37.93  Aligned_cols=33  Identities=24%  Similarity=0.369  Sum_probs=24.7

Q ss_pred             CcceeEeeCCCCCCCChhHHHHHHHHhhcc-CCcee
Q 046457           24 SIPFIVLHGIGDQCSNQGVKQFTENLSSFS-GSKGY   58 (59)
Q Consensus        24 ~~PvViwHGlGDsC~n~gm~~~~~ll~~~~-G~yv~   58 (59)
                      ..|+|+.||++++-  .....+.+.+++.. |.+|.
T Consensus         2 ~~PvvllHG~~~~~--~~~~~~~~~l~~~~~~~~v~   35 (268)
T d1pjaa_           2 YKPVIVVHGLFDSS--YSFRHLLEYINETHPGTVVT   35 (268)
T ss_dssp             CCCEEEECCTTCCG--GGGHHHHHHHHHHSTTCCEE
T ss_pred             CCCEEEECCCCCCH--HHHHHHHHHHHhhCCCeEEE
Confidence            57999999998753  46778888888764 55553

>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Bacterial lipase
domain: Lipase A
species: Bacillus subtilis [TaxId: 1423]

Probab=93.44  E-value=0.034  Score=32.57  Aligned_cols=27  Identities=26%  Similarity=0.414  Sum_probs=20.2

Q ss_pred             CcceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           24 SIPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        24 ~~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      ..|+|++||+|++.  ..+..+.+.+++.
T Consensus         2 ~~PVv~vHG~~~~~--~~~~~l~~~l~~~   28 (179)
T d1ispa_           2 HNPVVMVHGIGGAS--FNFAGIKSYLVSQ   28 (179)
T ss_dssp             CCCEEEECCTTCCG--GGGHHHHHHHHHT
T ss_pred             CCCEEEECCCCCCH--HHHHHHHHHHHHc
Confidence            36999999999863  3567777777665

>d1uxoa_ c.69.1.31 (A:) Hypothetical protein YdeN {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: YdeN-like
domain: Hypothetical protein YdeN
species: Bacillus subtilis [TaxId: 1423]

Probab=92.30  E-value=0.07  Score=30.18  Aligned_cols=28  Identities=14%  Similarity=0.184  Sum_probs=21.7

Q ss_pred             cceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           25 IPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        25 ~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      ++|++.||.|++-.+..+..+.+.+.+.
T Consensus         2 k~V~~vHG~~~~~~~~~~~~l~~~L~~~   29 (186)
T d1uxoa_           2 KQVYIIHGYRASSTNHWFPWLKKRLLAD   29 (186)
T ss_dssp             CEEEEECCTTCCTTSTTHHHHHHHHHHT
T ss_pred             CEEEEECCCCCCcchhHHHHHHHHHHhC
Confidence            5799999999986665677777777654

>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/lipase
domain: Carboxylesterase Est
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.77  E-value=0.1  Score=28.52  Aligned_cols=29  Identities=21%  Similarity=0.307  Sum_probs=20.5

Q ss_pred             ccCcceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           22 SRSIPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        22 ~~~~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      ..+.|||+.||.|++.  .....+.+.+.+.
T Consensus         9 ~~~~~vvliHG~~~~~--~~~~~l~~~L~~~   37 (242)
T d1tqha_           9 AGERAVLLLHGFTGNS--ADVRMLGRFLESK   37 (242)
T ss_dssp             CSSCEEEEECCTTCCT--HHHHHHHHHHHHT
T ss_pred             CCCCeEEEECCCCCCH--HHHHHHHHHHHHC
Confidence            4568999999999753  3566666666543

>d1xkta_ c.69.1.22 (A:) Fatty acid synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Thioesterase domain of polypeptide, polyketide and fatty acid synthases
domain: Fatty acid synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.29  E-value=0.05  Score=30.86  Aligned_cols=18  Identities=22%  Similarity=0.397  Sum_probs=14.5

Q ss_pred             cccCcceeEeeCCCCCCC
Q 046457           21 VSRSIPFIVLHGIGDQCS   38 (59)
Q Consensus        21 ~~~~~PvViwHGlGDsC~   38 (59)
                      ..+..|+|+.||.|++..
T Consensus        22 ~~~~~Pl~l~Hg~~gs~~   39 (286)
T d1xkta_          22 QSSERPLFLVHPIEGSTT   39 (286)
T ss_dssp             CCCSCCEEEECCTTCCCG
T ss_pred             CCCCCeEEEECCCCccHH
Confidence            455689999999999853

>d1auoa_ c.69.1.14 (A:) Carboxylesterase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carboxylesterase/thioesterase 1
domain: Carboxylesterase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=88.89  E-value=0.14  Score=30.33  Aligned_cols=25  Identities=28%  Similarity=0.336  Sum_probs=17.7

Q ss_pred             ceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           26 PFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        26 PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      .||++||.|++-.  ++..+.+.+.+.
T Consensus        16 ~Vi~lHG~G~~~~--~~~~~~~~l~~~   40 (218)
T d1auoa_          16 CVIWLHGLGADRY--DFMPVAEALQES   40 (218)
T ss_dssp             EEEEECCTTCCTT--TTHHHHHHHHTT
T ss_pred             EEEEEcCCCCChh--hHHHHHHHHHHh
Confidence            4677899998743  566777777654

>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC {Janthinobacterium sp. J3 [TaxId: 213804]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: Meta cleavage compound hydrolase CarC
species: Janthinobacterium sp. J3 [TaxId: 213804]

Probab=87.69  E-value=0.096  Score=30.06  Aligned_cols=27  Identities=22%  Similarity=0.413  Sum_probs=18.0

Q ss_pred             cceeEeeCCCCCCCCh-hHHHHHHHHhh
Q 046457           25 IPFIVLHGIGDQCSNQ-GVKQFTENLSS   51 (59)
Q Consensus        25 ~PvViwHGlGDsC~n~-gm~~~~~ll~~   51 (59)
                      -|+|+.||.|.++.+. .-..+.+.+++
T Consensus        23 ~~vvllHG~~~~~~~~~~~~~~~~~l~~   50 (268)
T d1j1ia_          23 QPVILIHGGGAGAESEGNWRNVIPILAR   50 (268)
T ss_dssp             SEEEEECCCSTTCCHHHHHTTTHHHHTT
T ss_pred             CeEEEECCCCCCccHHHHHHHHHHHHhc
Confidence            5899999999766543 33455555554

>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD)
species: Rhodococcus sp., strain rha1 [TaxId: 1831]

Probab=87.62  E-value=0.13  Score=29.97  Aligned_cols=28  Identities=21%  Similarity=0.395  Sum_probs=17.8

Q ss_pred             CcceeEeeCCCCCCCCh-hHHHHHHHHhh
Q 046457           24 SIPFIVLHGIGDQCSNQ-GVKQFTENLSS   51 (59)
Q Consensus        24 ~~PvViwHGlGDsC~n~-gm~~~~~ll~~   51 (59)
                      .-|+|+.||+|++.... ....+.+.+.+
T Consensus        26 ~p~ivllHG~~~~~~~~~~~~~~~~~L~~   54 (281)
T d1c4xa_          26 SPAVVLLHGAGPGAHAASNWRPIIPDLAE   54 (281)
T ss_dssp             SCEEEEECCCSTTCCHHHHHGGGHHHHHT
T ss_pred             CCEEEEECCCCCCCcHHHHHHHHHHHHhC
Confidence            35899999999876543 33444445544

>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Biotin biosynthesis protein BioH
domain: Biotin biosynthesis protein BioH
species: Escherichia coli [TaxId: 562]

Probab=87.44  E-value=0.17  Score=29.06  Aligned_cols=28  Identities=29%  Similarity=0.445  Sum_probs=19.5

Q ss_pred             cCcceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           23 RSIPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        23 ~~~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      .+.|+|+.||.|.+.  .....+.+.+.+.
T Consensus        10 g~~~lvllHG~~~~~--~~~~~~~~~L~~~   37 (256)
T d1m33a_          10 GNVHLVLLHGWGLNA--EVWRCIDEELSSH   37 (256)
T ss_dssp             CSSEEEEECCTTCCG--GGGGGTHHHHHTT
T ss_pred             CCCeEEEECCCCCCH--HHHHHHHHHHhCC
Confidence            457899999998653  2455666667653

>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp. [TaxId: 512]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: A novel bacterial esterase
domain: A novel bacterial esterase
species: Alcaligenes sp. [TaxId: 512]

Probab=87.24  E-value=0.13  Score=30.27  Aligned_cols=16  Identities=19%  Similarity=0.397  Sum_probs=12.6

Q ss_pred             ccCcceeEeeCCCCCC
Q 046457           22 SRSIPFIVLHGIGDQC   37 (59)
Q Consensus        22 ~~~~PvViwHGlGDsC   37 (59)
                      ..+.|+|++||.|.+-
T Consensus        56 ~~~~PvvllHG~~~~~   71 (318)
T d1qlwa_          56 AKRYPITLIHGCCLTG   71 (318)
T ss_dssp             CCSSCEEEECCTTCCG
T ss_pred             CCCCcEEEECCCCCCc
Confidence            3568999999988653

>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Carbon-carbon bond hydrolase
domain: Meta-cleavage product hydrolase CumD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=87.00  E-value=0.11  Score=29.83  Aligned_cols=27  Identities=30%  Similarity=0.395  Sum_probs=17.0

Q ss_pred             cceeEeeCCCCCCCCh-hHHHHHHHHhh
Q 046457           25 IPFIVLHGIGDQCSNQ-GVKQFTENLSS   51 (59)
Q Consensus        25 ~PvViwHGlGDsC~n~-gm~~~~~ll~~   51 (59)
                      .|+|+.||+|.+..+. ....+.+.+++
T Consensus        24 ~pvvllHG~~~~~~~~~~~~~~~~~l~~   51 (271)
T d1uk8a_          24 QPVILIHGSGPGVSAYANWRLTIPALSK   51 (271)
T ss_dssp             SEEEEECCCSTTCCHHHHHTTTHHHHTT
T ss_pred             CeEEEECCCCCCccHHHHHHHHHHHHhC
Confidence            6999999998765443 23344444444

>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida antarctica), form b [TaxId: 34362]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Fungal lipases
domain: Triacylglycerol lipase
species: Yeast (Candida antarctica), form b [TaxId: 34362]

Probab=86.65  E-value=0.12  Score=34.46  Aligned_cols=33  Identities=18%  Similarity=0.269  Sum_probs=20.9

Q ss_pred             ccccCcceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           20 PVSRSIPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        20 ~~~~~~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      +.....|||+.||+|.+..+..-..+.+.+.+.
T Consensus        27 p~~~~~PVvlvHG~~~~~~~~~~~~~~~~L~~~   59 (317)
T d1tcaa_          27 PSSVSKPILLVPGTGTTGPQSFDSNWIPLSTQL   59 (317)
T ss_dssp             TTSCSSEEEEECCTTCCHHHHHTTTHHHHHHTT
T ss_pred             CCCCCCcEEEECCCCCCCcchhHHHHHHHHHhC
Confidence            344558999999999764432234555666553

>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Proline iminopeptidase-like
domain: Proline aminopeptidase
species: Serratia marcescens [TaxId: 615]

Probab=86.30  E-value=0.19  Score=28.61  Aligned_cols=18  Identities=17%  Similarity=0.231  Sum_probs=14.2

Q ss_pred             cCcceeEeeCCCCCCCCh
Q 046457           23 RSIPFIVLHGIGDQCSNQ   40 (59)
Q Consensus        23 ~~~PvViwHGlGDsC~n~   40 (59)
                      +..|+|+.||.|.+...-
T Consensus        33 ~g~pvvllHG~~~~~~~w   50 (313)
T d1wm1a_          33 NGKPAVFIHGGPGGGISP   50 (313)
T ss_dssp             TSEEEEEECCTTTCCCCG
T ss_pred             CCCeEEEECCCCCcccch
Confidence            347999999998887654

>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hypothetical protein VC1974
domain: Hypothetical protein VC1974
species: Vibrio cholerae [TaxId: 666]

Probab=83.23  E-value=0.29  Score=26.91  Aligned_cols=26  Identities=15%  Similarity=0.359  Sum_probs=17.0

Q ss_pred             Ccc-eeEeeCCCCCCCChhHHHHHHHHhh
Q 046457           24 SIP-FIVLHGIGDQCSNQGVKQFTENLSS   51 (59)
Q Consensus        24 ~~P-vViwHGlGDsC~n~gm~~~~~ll~~   51 (59)
                      +.| +|+.||.|++..  ....+.+.+.+
T Consensus        15 ~~P~ivllHG~~~~~~--~~~~~~~~L~~   41 (264)
T d1r3da_          15 RTPLVVLVHGLLGSGA--DWQPVLSHLAR   41 (264)
T ss_dssp             TBCEEEEECCTTCCGG--GGHHHHHHHTT
T ss_pred             CCCeEEEeCCCCCCHH--HHHHHHHHHHh
Confidence            445 889999997633  45566666643

>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2) {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Hydroxynitrile lyase-like
domain: Salicylic acid-binding protein 2 (SABP2)
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=82.16  E-value=0.26  Score=27.00  Aligned_cols=26  Identities=15%  Similarity=0.171  Sum_probs=17.8

Q ss_pred             cceeEeeCCCCCCCChhHHHHHHHHhhc
Q 046457           25 IPFIVLHGIGDQCSNQGVKQFTENLSSF   52 (59)
Q Consensus        25 ~PvViwHGlGDsC~n~gm~~~~~ll~~~   52 (59)
                      .|+|+.||.|.+..  .-..+.+.|.+.
T Consensus         3 ~~vvllHG~~~~~~--~w~~~~~~L~~~   28 (258)
T d1xkla_           3 KHFVLVHGACHGGW--SWYKLKPLLEAA   28 (258)
T ss_dssp             CEEEEECCTTCCGG--GGTTHHHHHHHT
T ss_pred             CcEEEECCCCCCHH--HHHHHHHHHHhC
Confidence            58999999987643  345566666553

>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans [TaxId: 1916]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Chloroperoxidase L
species: Streptomyces lividans [TaxId: 1916]

Probab=80.83  E-value=0.37  Score=27.34  Aligned_cols=15  Identities=20%  Similarity=0.397  Sum_probs=11.9

Q ss_pred             cCcceeEeeCCCCCC
Q 046457           23 RSIPFIVLHGIGDQC   37 (59)
Q Consensus        23 ~~~PvViwHGlGDsC   37 (59)
                      +..|+|+.||+|++.
T Consensus        20 ~~~~vv~lHG~~~~~   34 (275)
T d1a88a_          20 DGLPVVFHHGWPLSA   34 (275)
T ss_dssp             TSCEEEEECCTTCCG
T ss_pred             CCCeEEEECCCCCCH
Confidence            346899999999863

>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces aureofaciens [TaxId: 1894]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Bromoperoxidase A1
species: Streptomyces aureofaciens [TaxId: 1894]

Probab=80.64  E-value=0.31  Score=27.74  Aligned_cols=14  Identities=21%  Similarity=0.373  Sum_probs=11.5

Q ss_pred             CcceeEeeCCCCCC
Q 046457           24 SIPFIVLHGIGDQC   37 (59)
Q Consensus        24 ~~PvViwHGlGDsC   37 (59)
                      ..|+|+.||.|++.
T Consensus        19 g~~ivlvHG~~~~~   32 (274)
T d1a8qa_          19 GRPVVFIHGWPLNG   32 (274)
T ss_dssp             SSEEEEECCTTCCG
T ss_pred             CCeEEEECCCCCCH
Confidence            36899999999764

>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: alpha/beta-Hydrolases
superfamily: alpha/beta-Hydrolases
family: Haloperoxidase
domain: Chloroperoxidase F
species: Pseudomonas fluorescens [TaxId: 294]

Probab=80.06  E-value=0.34  Score=27.49  Aligned_cols=24  Identities=17%  Similarity=0.138  Sum_probs=15.9

Q ss_pred             CcceeEeeCCCCCCCChhHHHHHHHH
Q 046457           24 SIPFIVLHGIGDQCSNQGVKQFTENL   49 (59)
Q Consensus        24 ~~PvViwHGlGDsC~n~gm~~~~~ll   49 (59)
                      ..|+|+.||.|++...  ...+.+.+
T Consensus        19 g~pvvllHG~~~~~~~--~~~~~~~l   42 (273)
T d1a8sa_          19 GQPIVFSHGWPLNADS--WESQMIFL   42 (273)
T ss_dssp             SSEEEEECCTTCCGGG--GHHHHHHH
T ss_pred             CCeEEEECCCCCCHHH--HHHHHHHH
Confidence            3699999999986443  34444444