Citrus Sinensis ID: 046545

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90---
Protein Sequence
MELETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNELLSAYASASYGNLRFNNFNFS
Secondary Structure (PSIPRED)
cccEEEEEEEEccHHHHHHHHHHHHccccEEEEEEEccccEEEEEEEccHHHHHHHHHHccccEEEccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEEccHHHHHHHHHHHHHccccEEEEEcccccEEEEEEEccHHHHHHHHHHccccEEEccccccccccccHHHHHHccccccccc
Coil and Loop (DISEMBL)
MELETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNELLSAYASAsygnlrfnnfnfs
Flexible Loop (DISEMBL)
meletvelkvemvgihekrlRKCLSKLrgiekvevdansqkvvvtgyahrnKILKAIRRGGLKADFWSAQNELLSAYAsasygnlrfnnfnfs
Low Complexity Region (SEG)
MELETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNELLSAYASASYGNLRFNNFNFS
Disordered region (IsUnstruct)
*******LKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNELLSAYASASYGNLRFNNF***
Disordered Region (DISOPRED)
*ELETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNE*********************
Disordered Region (DISEMBL)
MELETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNELLSAYASASYGNLRFNNFNFS
Disordered Region (DISPRO)
MELETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNELLSAYASASYGNLRFNN****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MELETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNELLSAYASASYGNLRFNNFNFS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	93	2.2.26 [Sep-21-2011]
Q9SZN7	153	Heavy metal-associated is	no	no	0.870	0.529	0.294	0.0002

>sp|Q9SZN7|HIP26_ARATH Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana GN=HIPP26 PE=1 SV=1

 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 2   ELETVELKVEM-VGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAI-RR 59
           +L+TVE+KV+M     E+++R+ +  ++G+  V ++  + KV V GY   NK++  +  R
Sbjct: 24  QLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHR 83

Query: 60  GGLKADFWS--AQNELLSAYASASY 82
            G K + W     + +   YA+  Y
Sbjct: 84  TGKKVELWPYVPYDVVAHPYAAGVY 108

Heavy-metal-binding protein. Binds lead, cadmium and copper. May be involved in heavy-metal transport.
Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
255539318	92	copper transport protein atox1, putative	0.967	0.978	0.934	2e-40
224083364	91	predicted protein [Populus trichocarpa]	0.967	0.989	0.888	2e-40
224065643	94	predicted protein [Populus trichocarpa]	0.967	0.957	0.9	7e-40
388500068	91	unknown [Lotus japonicus]	0.967	0.989	0.811	1e-35
449455732	91	PREDICTED: uncharacterized protein LOC10	0.946	0.967	0.808	9e-35
356557553	135	PREDICTED: uncharacterized protein LOC10	0.978	0.674	0.744	5e-33
356528048	91	PREDICTED: uncharacterized protein LOC10	0.870	0.890	0.827	1e-32
356510679	91	PREDICTED: uncharacterized protein LOC10	0.870	0.890	0.814	5e-32
297745598	85	unnamed protein product [Vitis vinifera]	0.870	0.952	0.845	3e-31
356523135	110	PREDICTED: uncharacterized protein LOC10	0.903	0.763	0.773	2e-30

>gi|255539318|ref|XP_002510724.1| copper transport protein atox1, putative [Ricinus communis] gi|223551425|gb|EEF52911.1| copper transport protein atox1, putative [Ricinus communis]

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 85/91 (93%), Positives = 88/91 (96%), Gaps = 1/91 (1%)

Query: 3  LETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 62
          +ETVE KVEMVGIHEKRLRK LSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL
Sbjct: 1  METVEFKVEMVGIHEKRLRKSLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 60

Query: 63 KADFWSAQNELLSAYA-SASYGNLRFNNFNF 92
          KADFWSAQNELL+AYA SASYG+LRFNNFNF
Sbjct: 61 KADFWSAQNELLNAYACSASYGSLRFNNFNF 91

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224083364|ref|XP_002306997.1| predicted protein [Populus trichocarpa] gi|222856446|gb|EEE93993.1| predicted protein [Populus trichocarpa]

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 80/90 (88%), Positives = 86/90 (95%)

Query: 3  LETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 62
          L+TVELKVEMVGIHEKRLRKCLSKL+GIEKVEVD +SQKV+VTGY HRNKILKAIRRGGL
Sbjct: 1  LQTVELKVEMVGIHEKRLRKCLSKLKGIEKVEVDVSSQKVMVTGYVHRNKILKAIRRGGL 60

Query: 63 KADFWSAQNELLSAYASASYGNLRFNNFNF 92
          KADFWS Q+ELLS YASASYG+LRFNNFNF
Sbjct: 61 KADFWSTQDELLSVYASASYGSLRFNNFNF 90

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065643|ref|XP_002301899.1| predicted protein [Populus trichocarpa] gi|222843625|gb|EEE81172.1| predicted protein [Populus trichocarpa]

 Score =  167 bits (423), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 81/90 (90%), Positives = 84/90 (93%)

Query: 3  LETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 62
          L+TVELKVEMVGIHEKRLRKCLSKL+GIEKVEVD N QKVVVTGYAHRNKILKAIRRGGL
Sbjct: 4  LQTVELKVEMVGIHEKRLRKCLSKLKGIEKVEVDVNIQKVVVTGYAHRNKILKAIRRGGL 63

Query: 63 KADFWSAQNELLSAYASASYGNLRFNNFNF 92
          KADFWS QNELLS YASASYG+L FNN NF
Sbjct: 64 KADFWSPQNELLSVYASASYGSLGFNNVNF 93

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500068|gb|AFK38100.1| unknown [Lotus japonicus]

 Score =  153 bits (387), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/90 (81%), Positives = 81/90 (90%)

Query: 3  LETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 62
          +ETVELKVEMV IHEKRL KCLSKL+GIEKVEVD N QKVVVTGYA++NKILKA+RRGGL
Sbjct: 1  METVELKVEMVCIHEKRLGKCLSKLKGIEKVEVDTNCQKVVVTGYANKNKILKAVRRGGL 60

Query: 63 KADFWSAQNELLSAYASASYGNLRFNNFNF 92
          KADFWSAQNELL+AY SA Y + RFN F+F
Sbjct: 61 KADFWSAQNELLNAYVSAKYASFRFNPFSF 90

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449455732|ref|XP_004145605.1| PREDICTED: uncharacterized protein LOC101218788 [Cucumis sativus] gi|449522964|ref|XP_004168495.1| PREDICTED: uncharacterized LOC101218788 [Cucumis sativus]

 Score =  150 bits (379), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 72/89 (80%), Positives = 81/89 (91%), Gaps = 1/89 (1%)

Query: 3  LETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 62
          +ETVELKVEMVGIHEKRLRKCLSKL+G+EKVEVDANSQKV V+ Y HRNKILKAIRR GL
Sbjct: 1  METVELKVEMVGIHEKRLRKCLSKLKGVEKVEVDANSQKVAVSSYIHRNKILKAIRRSGL 60

Query: 63 KADFWSAQNELLSAYASASYGNLRFNNFN 91
          KADFWSAQNELL+AYA+ +YG  RF+ +N
Sbjct: 61 KADFWSAQNELLNAYAT-TYGAFRFSPYN 88

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557553|ref|XP_003547080.1| PREDICTED: uncharacterized protein LOC100817596 [Glycine max]

 Score =  144 bits (364), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 70/94 (74%), Positives = 83/94 (88%), Gaps = 3/94 (3%)

Query: 1   MELETVELKVEMVGIHEKRLRKCLSKLRG---IEKVEVDANSQKVVVTGYAHRNKILKAI 57
           ++   VELKVEMVGIHEKRLRKCL+KL+G   IEKVEVD NSQKVVVTGYAH+NKILKA+
Sbjct: 40  LDPYIVELKVEMVGIHEKRLRKCLAKLKGWFGIEKVEVDCNSQKVVVTGYAHKNKILKAL 99

Query: 58  RRGGLKADFWSAQNELLSAYASASYGNLRFNNFN 91
           R+ GLKA FWS++N+LL+AY SASY NL+FNNF+
Sbjct: 100 RKAGLKAHFWSSKNDLLNAYLSASYANLKFNNFS 133

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356528048|ref|XP_003532617.1| PREDICTED: uncharacterized protein LOC100798244 [Glycine max]

 Score =  143 bits (360), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 67/81 (82%), Positives = 74/81 (91%)

Query: 3  LETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 62
          +E VELKVEMV IHEKRLRKCLSKL+GIEKVEVD N QKVVVTGY H+NKILKA+RRGGL
Sbjct: 1  MEVVELKVEMVCIHEKRLRKCLSKLKGIEKVEVDTNCQKVVVTGYTHKNKILKAVRRGGL 60

Query: 63 KADFWSAQNELLSAYASASYG 83
          KADFWSAQNELL+AY S++Y 
Sbjct: 61 KADFWSAQNELLNAYVSSNYA 81

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510679|ref|XP_003524063.1| PREDICTED: uncharacterized protein LOC100796736 [Glycine max]

 Score =  141 bits (355), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 66/81 (81%), Positives = 73/81 (90%)

Query: 3  LETVELKVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 62
          +E VELKVEMV IHEKRLRKCLSKL+GIEKVEVD N QKVVVTGY H+NKILKA+RRGGL
Sbjct: 1  MEVVELKVEMVCIHEKRLRKCLSKLKGIEKVEVDTNCQKVVVTGYTHKNKILKAVRRGGL 60

Query: 63 KADFWSAQNELLSAYASASYG 83
          KADFWSAQNE L+AY S++Y 
Sbjct: 61 KADFWSAQNEFLNAYVSSNYA 81

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745598|emb|CBI40763.3| unnamed protein product [Vitis vinifera]

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 71/84 (84%), Positives = 78/84 (92%), Gaps = 3/84 (3%)

Query: 12 MVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQN 71
          MVGIHEKRLRKCLSKL+GIEKVEVDANSQKVVVTGYAHRNKILKA++RGGLK DFWSAQN
Sbjct: 1  MVGIHEKRLRKCLSKLKGIEKVEVDANSQKVVVTGYAHRNKILKAVKRGGLKVDFWSAQN 60

Query: 72 ELLS---AYASASYGNLRFNNFNF 92
          ELL+   + + ASYG+LRFNNFNF
Sbjct: 61 ELLTAYASASYASYGSLRFNNFNF 84

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356523135|ref|XP_003530197.1| PREDICTED: uncharacterized protein LOC100800337 [Glycine max]

 Score =  136 bits (342), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 65/84 (77%), Positives = 75/84 (89%)

Query: 9   KVEMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWS 68
           +VEMV IHEKRLRKCL+KL+GIEKVEVD NSQ+VVVT YAH+NKILKA+R+ GLKADF  
Sbjct: 26  EVEMVVIHEKRLRKCLTKLKGIEKVEVDCNSQQVVVTRYAHKNKILKAMRKSGLKADFLY 85

Query: 69  AQNELLSAYASASYGNLRFNNFNF 92
           AQN+LL+AY SASY NLRFNNF+ 
Sbjct: 86  AQNDLLNAYVSASYANLRFNNFSI 109

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	93
TAIR|locus:2202265	159	AT1G06330 "AT1G06330" [Arabido	0.935	0.547	0.388	1.9e-12
TAIR|locus:4010713877	183	AT4G10465 [Arabidopsis thalian	0.709	0.360	0.507	1.7e-11
TAIR|locus:1005716648	178	AT2G18196 [Arabidopsis thalian	0.709	0.370	0.434	2.2e-11
TAIR|locus:4515103273	166	AT3G56891 [Arabidopsis thalian	0.688	0.385	0.462	5.8e-11
TAIR|locus:2101343	140	AT3G48970 "AT3G48970" [Arabido	0.838	0.557	0.392	2.9e-09
TAIR|locus:2026336	152	HIPP20 "heavy metal associated	0.849	0.519	0.369	3.6e-09
TAIR|locus:2157457	149	HIPP21 "heavy metal associated	0.688	0.429	0.373	7.6e-09
TAIR|locus:2135277	158	AT4G39700 [Arabidopsis thalian	0.860	0.506	0.376	7.6e-09
TAIR|locus:2131561	153	HIPP25 "heavy metal associated	0.870	0.529	0.344	8.7e-08
TAIR|locus:2133544	150	AT4G08570 "AT4G08570" [Arabido	0.870	0.54	0.305	2.3e-07

TAIR|locus:2202265 AT1G06330 "AT1G06330" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 35/90 (38%), Positives = 55/90 (61%)

Query:     1 MELETVELKVEM--VGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIR 58
             ++L+T+E++V M  VG  E R++  L K+RG++ VE+D   QKV VTGYA + K+LK +R
Sbjct:     8 IQLQTIEMRVHMDCVGC-ESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVR 66

Query:    59 RGGLKADFWSAQNELLSAYASASYGNLRFN 88
             + G +A+ W           S+S G   +N
Sbjct:    67 KTGRRAELWQLPYNPDHMGGSSSNGGYFYN 96

GO:0005507 "copper ion binding" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:4010713877 AT4G10465 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 34/67 (50%), Positives = 45/67 (67%)

Query:     1 MELETVELKVEMVGIHEKRL-RKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRR 59
             + L+TVELKV M      R+ R  +SKLRG++ VEVD    +V V GY  RNK+LKA+RR
Sbjct:    48 LSLQTVELKVRMCCTGCVRIVRNAISKLRGVDSVEVDKELGRVRVVGYVDRNKVLKAVRR 107

Query:    60 GGLKADF 66
              G +A+F
Sbjct:   108 AGKRAEF 114

GO:0005576 "extracellular region" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:1005716648 AT2G18196 [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/69 (43%), Positives = 47/69 (68%)

Query:     1 MELETVELKVEMV--GIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIR 58
             + L+T++LKV M   G  E+ ++  + KLRG++ VEV+   ++V V GY  R K+LKA+R
Sbjct:    43 LSLQTIDLKVRMCCSGC-ERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVR 101

Query:    59 RGGLKADFW 67
             R G +A+FW
Sbjct:   102 RAGKRAEFW 110

GO:0005576 "extracellular region" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:4515103273 AT3G56891 [Arabidopsis thaliana (taxid:3702)]

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 31/67 (46%), Positives = 46/67 (68%)

Query:     3 LETVELKVEM--VGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRG 60
             L  VEL V+M   G  EK++R+ +SKL G++ VE+D + QKV VTGY  R ++LK ++R 
Sbjct:    15 LSIVELLVDMDCKGC-EKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRT 73

Query:    61 GLKADFW 67
             G  A++W
Sbjct:    74 GRTAEYW 80

GO:0005886 "plasma membrane" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2101343 AT3G48970 "AT3G48970" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 33/84 (39%), Positives = 46/84 (54%)

Query:     5 TVELKVEMVGIH--EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYA-HRNKILKAIRRGG 61
             TVE++V  +       +LRK L KL+G+E+VEV+  +QKV   GY     K+LKA+RR G
Sbjct:     4 TVEIRVPNLDCEGCASKLRKTLLKLKGVEEVEVEMETQKVTARGYRLEEKKVLKAVRRAG 63

Query:    62 LKADFWS---AQNELLSAYASASY 82
               A+ W      +   S Y   SY
Sbjct:    64 KAAELWPYRLGNSHFASFYKYPSY 87

GO:0005507 "copper ion binding" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006825 "copper ion transport" evidence=ISS

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

TAIR|locus:2026336 HIPP20 "heavy metal associated isoprenylated plant protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 31/84 (36%), Positives = 49/84 (58%)

Query:     3 LETVELKVEMV--GIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRG 60
             ++TV +KV+M   G  E+R++  +S ++G++ VEV+    KV V+GY    K+LK I R 
Sbjct:    27 MQTVNIKVKMDCDGC-ERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERT 85

Query:    61 GLKADFWS--AQNELLSAYASASY 82
             G KA+ W     N +   YA  +Y
Sbjct:    86 GKKAEIWPYVPYNMVAYPYAVGTY 109

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2157457 HIPP21 "heavy metal associated isoprenylated plant protein 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 25/67 (37%), Positives = 45/67 (67%)

Query:     3 LETVELKVEMV--GIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRG 60
             L+TV++KV+M   G  E+R+R  + +++G++ VEV+    ++ V G+   NK+LK ++  
Sbjct:    25 LQTVDIKVKMDCDGC-ERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKST 83

Query:    61 GLKADFW 67
             G KA+FW
Sbjct:    84 GKKAEFW 90

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA;IGI

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2135277 AT4G39700 [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 32/85 (37%), Positives = 49/85 (57%)

Query:     2 ELETVELKVEMV--GIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRR 59
             + +TVELKV M   G   K ++  LS L+G++ VE++   QKV V+GYA  +K+LK  + 
Sbjct:    30 QFQTVELKVRMDCDGCVLK-IKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKA 88

Query:    60 GGLKADFWS--AQNELLSAYASASY 82
              G KA+ W     N +   Y + +Y
Sbjct:    89 TGKKAEIWPYVPYNLVAQPYIAQAY 113

GO:0005737 "cytoplasm" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

TAIR|locus:2131561 HIPP25 "heavy metal associated isoprenylated plant protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
 Identities = 30/87 (34%), Positives = 51/87 (58%)

Query:     3 LETVELKV--EMVGIHEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKIL-KAIRR 59
             L+TV+++V  +  G  E+++R+ L  +RGI  V ++ N+QKV V GY   NK++ + I R
Sbjct:    24 LQTVDVRVLIDCEGC-ERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARIIHR 82

Query:    60 GGLKADFWS--AQNELLSAYASASYGN 84
              G +A+ +     + +   YAS  Y N
Sbjct:    83 TGKRAELYPFVPYDVVAHPYASGVYDN 109

GO:0005634 "nucleus" evidence=ISM

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2133544 AT4G08570 "AT4G08570" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 26/85 (30%), Positives = 47/85 (55%)

Query:     2 ELETVELKVEMVGIH--EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRR 59
             +++TV L+V  +     E++++  LS ++G++ V+VD   QKV VTGY    K+L+A + 
Sbjct:    24 QMQTVALRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKS 83

Query:    60 GGLKADFWS--AQNELLSAYASASY 82
                K + W       + + Y S +Y
Sbjct:    84 TKKKVELWPYVPYTMVANPYISQAY 108

GO:0005575 "cellular_component" evidence=ND

GO:0030001 "metal ion transport" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA;ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	93
cd00371	63	cd00371, HMA, Heavy-metal-associated domain (HMA)	2e-06
pfam00403	62	pfam00403, HMA, Heavy-metal-associated domain	6e-05

>gnl|CDD|238219 cd00371, HMA, Heavy-metal-associated domain (HMA) is a conserved domain of approximately 30 amino acid residues found in a number of proteins that transport or detoxify heavy metals, for example, the CPx-type heavy metal ATPases and copper chaperones

 Score = 41.1 bits (97), Expect = 2e-06
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)

Query: 7  ELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRN--KILKAIRRG 60
          EL VE  G+       ++ K L KL G+E VEVD  + K  V      +  ++L+AI   
Sbjct: 1  ELSVE--GMTCAGCVSKIEKALEKLPGVESVEVDLETGKATVEYDPEVSPEELLEAIEDA 58

Query: 61 GLKA 64
          G KA
Sbjct: 59 GYKA 62

HMA domain contains two cysteine residues that are important in binding and transfer of metal ions, such as copper, cadmium, cobalt and zinc. In the case of copper, stoichiometry of binding is one Cu+ ion per binding domain. Repeats of the HMA domain in copper chaperone has been associated with Menkes/Wilson disease due to binding of multiple copper ions. Length = 63

>gnl|CDD|215902 pfam00403, HMA, Heavy-metal-associated domain

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 7/59 (11%)

Query: 10 VEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYA---HRNKILKAIRRGG 61
          + + G+      K++ K LSKL G+  V VD  + KV VTG        K+ KAI + G
Sbjct: 2  LRVPGMTCAGCAKKVEKALSKLPGVSSVSVDLETGKVTVTGDPDPLKLEKLKKAIEKAG 60

Length = 62

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	93
PF00403	62	HMA: Heavy-metal-associated domain; InterPro: IPR0	99.44
COG2608	71	CopZ Copper chaperone [Inorganic ion transport and	99.33
KOG1603	73	consensus Copper chaperone [Inorganic ion transpor	99.11
KOG4656	247	consensus Copper chaperone for superoxide dismutas	98.87
PLN02957	238	copper, zinc superoxide dismutase	98.45
PRK10671	834	copA copper exporting ATPase; Provisional	98.38
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.23
TIGR00003	68	copper ion binding protein. This model describes a	97.87
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.74
PRK10671	834	copA copper exporting ATPase; Provisional	97.45
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	97.42
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	97.18
TIGR02052	92	MerP mercuric transport protein periplasmic compon	90.95
PF01206	70	TusA: Sulfurtransferase TusA; InterPro: IPR001455	89.6
PRK13748	561	putative mercuric reductase; Provisional	89.45
COG1888	97	Uncharacterized protein conserved in archaea [Func	82.89

>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures

Probab=99.44  E-value=1.4e-12  Score=70.04  Aligned_cols=57  Identities=37%  Similarity=0.511  Sum_probs=52.4

Q ss_pred             EEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCc
Q 046545            7 ELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLK   63 (93)
Q Consensus         7 ~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~   63 (93)
                      +|.+ ||+|. |..+|+++|..++||.++.+|+.++++.|...   ..+++|.+.|+++||+
T Consensus         1 t~~v~~m~C~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy~   62 (62)
T PF00403_consen    1 TFKVPGMTCEGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGYE   62 (62)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTSE
T ss_pred             CEEECCcccHHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCcC
Confidence            4789 99999 99999999999999999999999999999854   4579999999999984

These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....

>COG2608 CopZ Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.33  E-value=1.9e-11  Score=67.71  Aligned_cols=63  Identities=29%  Similarity=0.361  Sum_probs=55.7

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEE--e-cCCHHHHHHHHHhcCCceEEe
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVT--G-YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~--~-~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      ...+++ ||+|. |+..|+++|..++|+.++++++..+.+.+.  + ..+.+++.+.+..+||.+..+
T Consensus         3 ~~~l~v~~MtC~~C~~~V~~al~~v~gv~~v~v~l~~~~~~V~~d~~~~~~~~i~~ai~~aGy~~~~~   70 (71)
T COG2608           3 KTTLKVEGMTCGHCVKTVEKALEEVDGVASVDVDLEKGTATVTFDSNKVDIEAIIEAIEDAGYKVEEI   70 (71)
T ss_pred             eEEEEECCcCcHHHHHHHHHHHhcCCCeeEEEEEcccCeEEEEEcCCcCCHHHHHHHHHHcCCCeeec
Confidence            578999 99999 999999999999999999999999766665  3 468999999999999987643

>KOG1603 consensus Copper chaperone [Inorganic ion transport and metabolism]

Probab=99.11  E-value=1.9e-09  Score=59.94  Aligned_cols=66  Identities=36%  Similarity=0.676  Sum_probs=58.7

Q ss_pred             ceEEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcC-CceEEec
Q 046545            3 LETVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGG-LKADFWS   68 (93)
Q Consensus         3 ~~~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G-~~~~~~~   68 (93)
                      ++...+.+.|+|. |..+|++.++.++||.++.+|...+++++.+..++..+++.+.+.+ .+..+|.
T Consensus         4 ~~~~v~kv~~~C~gc~~kV~~~l~~~~GV~~v~id~~~~kvtV~g~~~p~~vl~~l~k~~~k~~~~~~   71 (73)
T KOG1603|consen    4 IKTVVLKVNMHCEGCARKVKRVLQKLKGVESVDIDIKKQKVTVKGNVDPVKLLKKLKKTGGKRAELWK   71 (73)
T ss_pred             ccEEEEEECcccccHHHHHHHHhhccCCeEEEEecCCCCEEEEEEecCHHHHHHHHHhcCCCceEEec
Confidence            3456677799999 9999999999999999999999999999998899999999999887 6666664

>KOG4656 consensus Copper chaperone for superoxide dismutase [Inorganic ion transport and metabolism]

Probab=98.87  E-value=2e-08  Score=65.50  Aligned_cols=68  Identities=26%  Similarity=0.343  Sum_probs=62.1

Q ss_pred             EEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEecCCcc
Q 046545            5 TVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQNE   72 (93)
Q Consensus         5 ~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~~~~   72 (93)
                      ..+|.|.|+|+ |+..|+..|..++||.++.+|+..+.+.|.+...++.+.+.|+.+|.++.+...-.+
T Consensus         8 ~~efaV~M~cescvnavk~~L~~V~Gi~~vevdle~q~v~v~ts~p~s~i~~~le~tGr~Avl~G~G~p   76 (247)
T KOG4656|consen    8 EAEFAVQMTCESCVNAVKACLKGVPGINSVEVDLEQQIVSVETSVPPSEIQNTLENTGRDAVLRGAGKP   76 (247)
T ss_pred             eEEEEEechhHHHHHHHHHHhccCCCcceEEEEhhhcEEEEEccCChHHHHHHHHhhChheEEecCCch
Confidence            45788899999 999999999999999999999999999999888999999999999999998865433

>PLN02957 copper, zinc superoxide dismutase

Probab=98.45  E-value=4.1e-06  Score=56.05  Aligned_cols=66  Identities=27%  Similarity=0.314  Sum_probs=58.0

Q ss_pred             eEEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEecC
Q 046545            4 ETVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSA   69 (93)
Q Consensus         4 ~~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~   69 (93)
                      +++.+.++|.|. |..++++.|++++|+..+.+++..+++.+........+...+++.||.+++++-
T Consensus         6 ~~~~~~VgMsC~~Ca~~Iek~L~~~~GV~~v~vn~~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~   72 (238)
T PLN02957          6 LLTEFMVDMKCEGCVAAVKNKLETLEGVKAVEVDLSNQVVRVLGSSPVKAMTAALEQTGRKARLIGQ   72 (238)
T ss_pred             EEEEEEECccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEecCCHHHHHHHHHHcCCcEEEecC
Confidence            456677799999 999999999999999999999999998888666788899999999999887753

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.38  E-value=1.9e-06  Score=66.21  Aligned_cols=63  Identities=22%  Similarity=0.387  Sum_probs=54.4

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      .+.++.+ ||+|. |..+|++++.+++|+..+.+++.  +..+....+.+.+.+.+++.||++....
T Consensus         3 ~~~~l~V~gmtC~~C~~~i~~al~~~~gv~~v~v~~~--~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   67 (834)
T PRK10671          3 QTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSIT--EAHVTGTASAEALIETIKQAGYDASVSH   67 (834)
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCcceEEEeee--EEEEEecCCHHHHHHHHHhcCCcccccc
Confidence            3578999 99999 99999999999999999999984  4455555688999999999999988653

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.23  E-value=6.3e-06  Score=62.56  Aligned_cols=61  Identities=25%  Similarity=0.403  Sum_probs=54.0

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CC-HHHHHHHHHhcCCceEE
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AH-RNKILKAIRRGGLKADF   66 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~-~~~i~~~i~~~G~~~~~   66 (93)
                      +..+.+ ||+|. |..+|+ +|++++||....+|+.++++.+..+   .+ .+.+...++..||.+..
T Consensus         3 ~~~l~v~Gm~Ca~C~~~ie-~l~~~~gV~~~~vn~~t~~~~v~~~~~~~~~~~~~~~~v~~~gy~~~~   69 (713)
T COG2217           3 ETSLSVEGMTCAACASRIE-ALNKLPGVEEARVNLATERATVVYDPEEVDLPADIVAAVEKAGYSARL   69 (713)
T ss_pred             eeEEeecCcCcHHHHHHHH-HHhcCCCeeEEEeecccceEEEEecccccccHHHHHHHHHhcCccccc
Confidence            567999 99999 999999 9999999999999999999998732   34 68899999999997654

>TIGR00003 copper ion binding protein

Probab=97.87  E-value=0.0004  Score=34.97  Aligned_cols=59  Identities=25%  Similarity=0.305  Sum_probs=47.2

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCc
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLK   63 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~   63 (93)
                      +..+.+ |+.|. |...++..++..+++....++.....+.+..   ......+...+...|+.
T Consensus         3 ~~~~~v~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   66 (68)
T TIGR00003         3 KFTVQVMSMTCQHCVDKIEKFVGELEGVSKVQVKLEKASVKVEFDAPQATEICIAEAILDAGYE   66 (68)
T ss_pred             EEEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEcCCCEEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence            356899 99999 9999999999999999999999988877763   23566666666777764

This model describes an apparently copper-specific subfamily of the metal-binding domain HMA (Pfam family pfam00403). Closely related sequences outside this model include mercury resistance proteins and repeated domains of eukaryotic eukaryotic copper transport proteins. Members of this family are strictly prokaryotic. The model identifies both small proteins consisting of just this domain and N-terminal regions of cation (probably copper) transporting ATPases.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.74  E-value=0.00017  Score=55.80  Aligned_cols=66  Identities=23%  Similarity=0.359  Sum_probs=58.6

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEecC
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWSA   69 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~~   69 (93)
                      .+..|.+ ||.|. |..++++.+..++||.+..++..++++.+..   ...+.++.+.+...|+.+...+.
T Consensus       146 ~~i~L~v~g~~c~s~~~~ie~~l~~l~gV~~~sv~~~t~~~~V~~~~~~~~pr~i~k~ie~~~~~~~~~~~  216 (951)
T KOG0207|consen  146 QKIYLDVLGMTCASCVSKIESILERLRGVKSFSVSLATDTAIVVYDPEITGPRDIIKAIEETGFEASVRPY  216 (951)
T ss_pred             CcEEEEeecccccchhhhhHHHHhhccCeeEEEEeccCCceEEEecccccChHHHHHHHHhhcccceeeec
Confidence            3578999 99999 9999999999999999999999999999873   36899999999999998776653

>PRK10671 copA copper exporting ATPase; Provisional

Probab=97.45  E-value=0.00095  Score=51.66  Aligned_cols=63  Identities=19%  Similarity=0.359  Sum_probs=53.5

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEe
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      +..+.+ ||+|. |...+++.+...+|+..+.+++.+++..+....+.+.+...+.+.||.+.+.
T Consensus       100 ~~~l~V~Gm~Ca~Ca~~Ie~~L~~~~GV~~a~vnl~t~~~~V~~~~s~~~I~~~I~~~Gy~a~~~  164 (834)
T PRK10671        100 SQQLLLSGMSCASCVSRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYGAEAI  164 (834)
T ss_pred             eEEEEeCCcCcHHHHHHHHHHHhcCCCceeeeeecCCCeEEEEccCCHHHHHHHHHhcCCCcccc
Confidence            356889 99999 9999999999999999999999998877765456778888889999976544

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.42  E-value=0.00063  Score=52.79  Aligned_cols=65  Identities=22%  Similarity=0.272  Sum_probs=56.9

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEecC
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWSA   69 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~~   69 (93)
                      +..+++ ||.|. |...+++.++..+|+.++.+.+...+..+..   ...++.+.+.+++.|+.+.....
T Consensus        70 ~~~l~v~GmtC~scv~~i~~~l~~~~gv~~~~val~~~~~~v~~dp~v~s~~~~~e~ie~~gf~a~~i~~  139 (951)
T KOG0207|consen   70 KCYLSVNGMTCASCVATIERNLRKIEGVESAVVALSASKAEVIYDPAVTSPDSIAESIEDLGFSAELIES  139 (951)
T ss_pred             eeEEEecCceeHHHHHHHHHHhhccCCcceEEEEeeccceeEEECCcccCchhHHHHHHhcCccceehhc
Confidence            346889 99999 9999999999999999999999998888773   35789999999999999887654

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=97.18  E-value=0.0025  Score=48.93  Aligned_cols=64  Identities=20%  Similarity=0.282  Sum_probs=51.0

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec-CCHHHHHHHHHhcCCceEEe
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY-AHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~-~~~~~i~~~i~~~G~~~~~~   67 (93)
                      .+..+.+ ||+|. |..++++.+...+|+..+.+++.++++.+... ...+.+...+...||.+...
T Consensus        53 ~r~~l~V~Gm~C~sCa~~Ie~aL~~~~GV~~v~Vn~at~k~~V~~d~~~~~~I~~aI~~~Gy~a~~~  119 (741)
T PRK11033         53 TRYSWKVSGMDCPSCARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESAVQKAGFSLRDE  119 (741)
T ss_pred             ceEEEEECCCCcHHHHHHHHHHHhcCCCeeeEEEEcCCCeEEEEecccchHHHHHHHHhcccccccc
Confidence            3567889 99999 99999999999999999999999988777632 12256677788889876543

>TIGR02052 MerP mercuric transport protein periplasmic component

Probab=90.95  E-value=1.5  Score=23.56  Aligned_cols=60  Identities=25%  Similarity=0.324  Sum_probs=42.4

Q ss_pred             EEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceE
Q 046545            6 VELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKAD   65 (93)
Q Consensus         6 ~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~   65 (93)
                      ..+.+ ++.|. |...++..+...+++.....+.......+..   ......+...+...|+..+
T Consensus        25 ~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~   89 (92)
T TIGR02052        25 VTLEVPGMTCVACPITVETALQKVDGVSKAEVTFKTKLAVVTFDDEKTNVKALTEATTDAGYPSS   89 (92)
T ss_pred             EEEEECCeEcHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeE
Confidence            45778 99999 9999999998888888777777777655542   1344455455566676643

This model represents the periplasmic mercury (II) binding protein of the bacterial mercury detoxification system which passes mercuric ion to the MerT transporter for subsequent reduction to Hg(0) by the mercuric reductase MerA. MerP contains a distinctive GMTCXXC motif associated with metal binding. MerP is related to a larger family of metal binding proteins (pfam00403).

>PF01206 TusA: Sulfurtransferase TusA; InterPro: IPR001455 SirA functions as a response regulator as part of a two-component system, where BarA is the sensor kinase

Probab=89.60  E-value=2  Score=22.88  Aligned_cols=52  Identities=15%  Similarity=0.052  Sum_probs=36.6

Q ss_pred             EEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEe
Q 046545            7 ELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG--YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         7 ~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      ++.+ |+.|+ ...++.++|..++.         ++.+.+..  ......+...++..|+....+
T Consensus         2 ~lD~rg~~CP~Pll~~~~~l~~l~~---------G~~l~v~~d~~~~~~di~~~~~~~g~~~~~~   57 (70)
T PF01206_consen    2 TLDLRGLSCPMPLLKAKKALKELPP---------GEVLEVLVDDPAAVEDIPRWCEENGYEVVEV   57 (70)
T ss_dssp             EEECSS-STTHHHHHHHHHHHTSGT---------T-EEEEEESSTTHHHHHHHHHHHHTEEEEEE
T ss_pred             EEeCCCCCCCHHHHHHHHHHHhcCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence            5778 99999 99999999998743         23344432  234677888999999975544

This system increases the expression of virulence genes and decreases the expression of motility genes []. BarA phosphorylates SirA, thereby activating the protein. Phosphorylated SirA directly activates virulence expression by interacting with hilA and hilC promoters, while repressing the flagellar regulon indirectly by binding to the csrB promoter, which in turn affects flagellar gene expression. Orthologues of SirA from Salmonella spp. can be found throughout proteobacteria, such as GacA in Psuedomonas spp., VarA in Vibrio cholerae, ExpA in Erwinia carotovora, LetA in Legionella pneumophila, and UvrY in Escherichia coli []. A sensor kinase for SirA is present in each of these organisms as well; the sensor kinase is known as BarA in E. coli and Salmonella spp., but has different names in other genera. In different species, SirA/BarA orthologues are required for virulence gene expression, exoenzyme and antibiotic production, motility, and biofilm formation. The structure of SirA consists of an alpha/beta sandwich with a beta-alpha-beta-alpha-beta(2) fold, comprising a mixed four-stranded beta-sheet stacked against two alpha-helices, both of which are nearly parallel to the strands of the beta-sheet []. Several uncharacterised bacterial proteins (73 to 81 amino-acid residues in length) that contain a well-conserved region in their N-terminal region show structural similarity to the SirA protein, including the E. coli protein YedF (P0AA31 from SWISSPROT), and other members of the UPF0033 family.; GO: 0016783 sulfurtransferase activity, 0008033 tRNA processing, 0005737 cytoplasm; PDB: 3LVJ_D 3LVK_B 1DCJ_A 3HZ7_A 1JDQ_A 1JE3_A 1PAV_A.

>PRK13748 putative mercuric reductase; Provisional

Probab=89.45  E-value=4.9  Score=29.85  Aligned_cols=62  Identities=16%  Similarity=0.216  Sum_probs=46.5

Q ss_pred             EEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEec
Q 046545            7 ELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG--YAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         7 ~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      .+.+ ++.|. |..+++..+...+++.....+.......+..  ......+...+...|+...+..
T Consensus         3 ~i~i~g~~C~~c~~~ie~~l~~~~gv~~a~~~~~~~~~~v~~~~~~~~~~i~~~i~~~g~~~~~~~   68 (561)
T PRK13748          3 TLKITGMTCDSCAAHVKDALEKVPGVQSADVSYPKGSAQLAIEVGTSPDALTAAVAGLGYRATLAD   68 (561)
T ss_pred             EEEECCeecHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCeeeccC
Confidence            4668 99999 9999999999999988888888887765552  2345556666777887765554

>COG1888 Uncharacterized protein conserved in archaea [Function unknown]

Probab=82.89  E-value=7.1  Score=22.63  Aligned_cols=64  Identities=23%  Similarity=0.263  Sum_probs=40.6

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecC-----CC--EEEEEe-cCCHHHHHHHHHhcCCceEE
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDAN-----SQ--KVVVTG-YAHRNKILKAIRRGGLKADF   66 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~-----~~--~v~v~~-~~~~~~i~~~i~~~G~~~~~   66 (93)
                      .++..+.+ -.+-. -.-.+.+.|++++||..+++...     +.  ++++.+ .++.+++...|++.|...+.
T Consensus         5 iRRlVLDvlKP~~~p~ive~A~~lskl~gVegVNItv~eiD~et~~~~itIeG~~ldydei~~~iE~~Gg~IHS   78 (97)
T COG1888           5 IRRLVLDVLKPHRGPTIVELALELSKLEGVEGVNITVTEIDVETENLKITIEGTNLDYDEIEEVIEELGGAIHS   78 (97)
T ss_pred             ceeeeeeecCCcCCCcHHHHHHHHhhcCCcceEEEEEEEeeehhcceEEEEEcCCCCHHHHHHHHHHcCCeeee
Confidence            34555555 33323 44456667888888877665433     33  334444 57999999999999976543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	93
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	2e-14
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	4e-11
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	2e-10
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	4e-10
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	6e-09
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	4e-06
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	6e-06
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	2e-04
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	3e-04

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 98

 Score = 62.2 bits (151), Expect = 2e-14
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 1/80 (1%)

Query: 3  LETVELKVEMVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGG 61
          L T+E  V+M        +RK L  + G++ VEV    Q V+V       ++   +   G
Sbjct: 18 LCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTG 77

Query: 62 LKADFWSAQNELLSAYASAS 81
           +A      +  L     +S
Sbjct: 78 RQAVLKGMGSGQLQNSGPSS 97

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A Length = 68

 Score = 52.4 bits (126), Expect = 4e-11
 Identities = 13/67 (19%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 5  TVELKVEMVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLK 63
            E  V+M      + + + L+KL G+ K ++D  ++KV +      + +L  +++ G  
Sbjct: 3  KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKT 61

Query: 64 ADFWSAQ 70
            +   +
Sbjct: 62 VSYLGLE 68

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 249

 Score = 54.0 bits (129), Expect = 2e-10
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 1/78 (1%)

Query: 6  VELKVEMVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKA 64
              + M   +    ++ CL  + GI  +  D   Q + V      + I+  +R  G  A
Sbjct: 9  ATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDA 68

Query: 65 DFWSAQNELLSAYASASY 82
              A     SA A    
Sbjct: 69 IIRGAGKPNSSAVAILET 86

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1 Length = 222

 Score = 52.7 bits (126), Expect = 4e-10
 Identities = 14/71 (19%), Positives = 23/71 (32%), Gaps = 7/71 (9%)

Query: 6  VELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGG 61
              + M   H       ++ CL  + GI  +  D   Q + V      + I+  +R  G
Sbjct: 8  ATYAIPM---HCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCG 64

Query: 62 LKADFWSAQNE 72
            A    A   
Sbjct: 65 KDAIIRGAGKP 75

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A Length = 73

 Score = 47.1 bits (112), Expect = 6e-09
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 2  ELETVELKVEMVGIH-EKRLRKCLSKL-RGIEKVEVDANSQKVVVTGYAHRNKILKAIRR 59
          E++  +  V M        + K L+KL   + K+++    Q V V      + IL+ I++
Sbjct: 3  EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 62

Query: 60 GGLKA 64
           G + 
Sbjct: 63 TGKEV 67

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A Length = 64

 Score = 39.6 bits (93), Expect = 4e-06
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 5  TVELKVE-MVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGG 61
          T++L V  +      + + K +        V+VD  S+KV +T      ++  AI   G
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAG 60

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str} Length = 85

 Score = 39.8 bits (93), Expect = 6e-06
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 2/59 (3%)

Query: 5  TVELKVE-MVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGG 61
           +   VE M   H    ++  + K      V  D  S+ VVV G +    I + I   G
Sbjct: 23 GLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAG 81

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori} Length = 66

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 5  TVELKVE-MVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAH--RNKILKAIRRG 60
              +V  +   H   ++ K + ++ G+  ++V    + VVV   A   ++ I +A+   
Sbjct: 2  KATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDA 61

Query: 61 G 61
          G
Sbjct: 62 G 62

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A Length = 66

 Score = 34.9 bits (81), Expect = 3e-04
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 6  VELKVE-MVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLK 63
          ++LKVE M   H    + K L K+ G+EKVEV     + +V G A    +++A+   G K
Sbjct: 2  LKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYK 61

Query: 64 A 64
          A
Sbjct: 62 A 62

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	93
3iwl_A	68	Copper transport protein ATOX1; beta-alpha-beta-BE	99.57
3dxs_X	74	Copper-transporting ATPase RAN1; CXXC motif, ferre	99.51
4a4j_A	69	Pacszia, cation-transporting ATPase PACS; hydrolas	99.5
3fry_A	73	Probable copper-exporting P-type ATPase A; transpo	99.5
1cc8_A	73	Protein (metallochaperone ATX1); copper transport,	99.48
2crl_A	98	Copper chaperone for superoxide dismutase; SOD1, f	99.41
1mwy_A	73	ZNTA; open-faced beta-sandwich fold, beta-alpha-be	99.31
2l3m_A	71	Copper-ION-binding protein; structural genomics, c	99.3
1osd_A	72	MERP, hypothetical protein MERP; mercury resistanc	99.3
2xmw_A	71	PACS-N, cation-transporting ATPase PACS; hydrolase	99.29
2xmm_A	64	SSR2857 protein, ATX1; metal transport, copper hom	99.29
2roe_A	66	Heavy metal binding protein; NMR {Thermus thermoph	99.28
2k2p_A	85	Uncharacterized protein ATU1203; putative metal-bi	99.28
1yjr_A	75	Copper-transporting ATPase 1; metallochaperone, pr	99.27
1y3j_A	77	Copper-transporting ATPase 1; ferrodoxin-like fold	99.27
1q8l_A	84	Copper-transporting ATPase 1; metal binding protei	99.26
3cjk_B	75	Copper-transporting ATPase 1; HAH1, ATP7B, menkes	99.25
1kvi_A	79	Copper-transporting ATPase 1; menkes, Cu-protein,	99.25
2qif_A	69	Copper chaperone COPZ; tetranuclear Cu(I) cluster;	99.25
1aw0_A	72	Menkes copper-transporting ATPase; copper-binding	99.25
2g9o_A	90	Copper-transporting ATPase 1; menkes disease, solu	99.23
1cpz_A	68	Protein (COPZ); copper chaperone, metal transport,	99.23
1opz_A	76	Potential copper-transporting ATPase; mutation, fo	99.22
1fvq_A	72	Copper-transporting ATPase; APO-CCC2A, hydrolase;	99.2
2kt2_A	69	Mercuric reductase; nmera, MERA, HMA domain, mercu	99.2
1yg0_A	66	COP associated protein; open-faced beta-sandwich,	99.18
2ldi_A	71	Zinc-transporting ATPase; metal homeostasis, metal	99.17
2kkh_A	95	Putative heavy metal transporter; zinc transport,	99.17
1jww_A	80	Potential copper-transporting ATPase; beta-alpha-b	99.16
2ofg_X	111	Zinc-transporting ATPase; ferredoxin-like fold, be	99.16
2kyz_A	67	Heavy metal binding protein; structural genomics,	99.13
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.11
2ew9_A	149	Copper-transporting ATPase 2; copper trafficking,	99.11
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	99.08
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	99.05
1qup_A	222	Superoxide dismutase 1 copper chaperone; two domai	99.01
2aj0_A	71	Probable cadmium-transporting ATPase; ferrodoxin-l	98.97
1jk9_B	249	CCS, copper chaperone for superoxide dismutase; pr	98.88
1p6t_A	151	Potential copper-transporting ATPase; COPA, P-type	98.7
2rop_A	202	Copper-transporting ATPase 2; wilson protein, mobi	98.63
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.62
3lvj_C	82	Sulfurtransferase TUSA; protein-protein complex, s	92.36
1jdq_A	98	TM006 protein, hypothetical protein TM0983; struct	91.67
1je3_A	97	EC005, hypothetical 8.6 kDa protein in AMYA-FLIE i	80.72

>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A

Probab=99.57  E-value=3.3e-14  Score=76.63  Aligned_cols=64  Identities=20%  Similarity=0.394  Sum_probs=59.6

Q ss_pred             eEEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 046545            4 ETVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         4 ~~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      .+..|.+||+|. |..+|+++|++++|| .+.+|+.++++.+.+..+++.+.+.|++.||.+.+++
T Consensus         2 ~~~~~~vgm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   66 (68)
T 3iwl_A            2 PKHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   66 (68)
T ss_dssp             CEEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEE
T ss_pred             ceEEEEECcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecC
Confidence            356788899999 999999999999999 9999999999999988899999999999999999886

>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0

Probab=99.51  E-value=2.1e-13  Score=74.08  Aligned_cols=66  Identities=17%  Similarity=0.260  Sum_probs=59.9

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      |++..|.| ||+|. |..+|+++|++++||..+.+|+.++++.|...   .+.+.+.+.|++.||.+.+++
T Consensus         1 M~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (74)
T 3dxs_X            1 MRKIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILA   71 (74)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEE
T ss_pred             CcEEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEcc
Confidence            45788999 99999 99999999999999999999999999998742   588999999999999988775

>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A

Probab=99.50  E-value=4.6e-13  Score=71.75  Aligned_cols=64  Identities=20%  Similarity=0.397  Sum_probs=58.1

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEe
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVT--GYAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~--~~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      ++..|.+ ||+|. |..+|++.|+.++||..+.+|+.++++.+.  ...+++.+.+.|++.||.+.++
T Consensus         2 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   69 (69)
T 4a4j_A            2 QTINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL   69 (69)
T ss_dssp             EEEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred             CEEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence            4578999 99999 999999999999999999999999999988  4568999999999999987653

>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}

Probab=99.50  E-value=2.1e-13  Score=74.28  Aligned_cols=65  Identities=25%  Similarity=0.333  Sum_probs=60.0

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEecC
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSA   69 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~   69 (93)
                      |.+..|.| ||+|. |..+|+++|+. +||..+.+|+..+++.|... +++.+.+.|++.||.+.+.+.
T Consensus         4 m~~~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~   70 (73)
T 3fry_A            4 VEKIVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS   70 (73)
T ss_dssp             CEEEEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred             cEEEEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence            55788999 99999 99999999999 99999999999999999877 889999999999999888763

>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A

Probab=99.48  E-value=9.1e-13  Score=71.51  Aligned_cols=68  Identities=22%  Similarity=0.272  Sum_probs=61.2

Q ss_pred             CC-ceEEEEEeeCcch-hHHHHHHHHhCCC-CeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 046545            1 ME-LETVELKVEMVGI-HEKRLRKCLSKLR-GIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         1 m~-~~~~~~~igm~C~-C~~~i~~~l~~~~-Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      |. |.+..|.+.|+|. |..+|++.|++++ ||.++.+|+..+++.+.+..+.+.+.+.|++.||.+.++.
T Consensus         1 m~~m~~~~~~v~m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~   71 (73)
T 1cc8_A            1 MAEIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK   71 (73)
T ss_dssp             -CCCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred             CCCceEEEEEEeeECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence            55 5677888899999 9999999999999 9999999999999999887789999999999999987764

>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.41  E-value=4.3e-12  Score=73.12  Aligned_cols=70  Identities=24%  Similarity=0.267  Sum_probs=63.3

Q ss_pred             CCceEEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEecCC
Q 046545            1 MELETVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSAQ   70 (93)
Q Consensus         1 m~~~~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~~   70 (93)
                      |.+.+..|.|.|+|. |..+|+++|..++||..+.+|+..+++.|....+.+.|.+.|++.||.+.++...
T Consensus        16 ~~~~~~~l~V~m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~   86 (98)
T 2crl_A           16 GTLCTLEFAVQMTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMG   86 (98)
T ss_dssp             CCCEEEEEEECCCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESC
T ss_pred             ccceEEEEEEeeECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCC
Confidence            556677788899999 9999999999999999999999999999988778999999999999999887644

>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A

Probab=99.31  E-value=5.7e-11  Score=63.80  Aligned_cols=65  Identities=20%  Similarity=0.253  Sum_probs=56.4

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecC-CHHHHHHHHHhcCCceEEe
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYA-HRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~-~~~~i~~~i~~~G~~~~~~   67 (93)
                      |.+..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+.... ..+.+...|...||.+...
T Consensus         2 m~~~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~   69 (73)
T 1mwy_A            2 GTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred             CeEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence            45678999 99999 999999999999999999999999999987432 3677888999999986643

>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}

Probab=99.30  E-value=4.2e-11  Score=63.67  Aligned_cols=62  Identities=24%  Similarity=0.318  Sum_probs=55.2

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKA   64 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~   64 (93)
                      |.+..|.+ ||.|. |..+|++.|..++||..+.+++..+.+.+..   ....+.+...|...||.+
T Consensus         4 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   70 (71)
T 2l3m_A            4 MEQLTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV   70 (71)
T ss_dssp             EEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence            45678999 99999 9999999999999999999999999998873   357888999999999864

>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A

Probab=99.30  E-value=5.1e-11  Score=63.40  Aligned_cols=64  Identities=30%  Similarity=0.375  Sum_probs=56.4

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEE
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADF   66 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~   66 (93)
                      +.+..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+..   ....+.+...+...||.+.+
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1osd_A            2 TQTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV   70 (72)
T ss_dssp             EEEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred             ceEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence            35678999 99999 9999999999999999999999999999873   24678899999999998654

>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A

Probab=99.29  E-value=6e-11  Score=62.87  Aligned_cols=63  Identities=19%  Similarity=0.357  Sum_probs=55.3

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEE
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY--AHRNKILKAIRRGGLKADF   66 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~   66 (93)
                      ++..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+...  .+.+.+...+...||.+.+
T Consensus         3 ~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~   69 (71)
T 2xmw_A            3 QTINLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARV   69 (71)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEE
T ss_pred             cEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCcee
Confidence            4578999 99999 99999999999999999999999999998743  5678899999999998654

>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A

Probab=99.29  E-value=1.4e-11  Score=64.19  Aligned_cols=59  Identities=22%  Similarity=0.310  Sum_probs=54.5

Q ss_pred             EEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCce
Q 046545            6 VELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKA   64 (93)
Q Consensus         6 ~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~   64 (93)
                      ..|.+ ||+|. |..++++.|..++||..+.+++..+++.+....+.+.+.+.+.+.||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~   63 (64)
T 2xmm_A            3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV   63 (64)
T ss_dssp             EEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred             EEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            56999 99999 9999999999999999999999999999987678889999999999864

>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A

Probab=99.28  E-value=1e-11  Score=65.69  Aligned_cols=61  Identities=33%  Similarity=0.462  Sum_probs=54.8

Q ss_pred             EEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEe
Q 046545            7 ELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         7 ~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      .|.+ ||+|. |..+|++.|..++||..+.+|+..+.+.+....+.+.+.+.+.+.||.+..+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~   65 (66)
T 2roe_A            3 KLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL   65 (66)
T ss_dssp             CEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence            5889 99999 9999999999999999999999999999855567899999999999986543

>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}

Probab=99.28  E-value=1.3e-11  Score=69.37  Aligned_cols=62  Identities=21%  Similarity=0.228  Sum_probs=56.2

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCce
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKA   64 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~   64 (93)
                      +.+..|.| ||.|. |..+|++.|..++||..+.+|+..+++.+....+++.|.+.|..+||.+
T Consensus        21 ~~~~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~   84 (85)
T 2k2p_A           21 GAGLSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP   84 (85)
T ss_dssp             -CEEEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred             ccEEEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence            34568999 99999 9999999999999999999999999999987778899999999999964

>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A

Probab=99.27  E-value=2.7e-11  Score=64.99  Aligned_cols=66  Identities=23%  Similarity=0.259  Sum_probs=57.7

Q ss_pred             CCceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 046545            1 MELETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADF   66 (93)
Q Consensus         1 m~~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~   66 (93)
                      |+.....|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+...   ...+.+...+...||.+.+
T Consensus         1 m~~~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   71 (75)
T 1yjr_A            1 MGDGVLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSL   71 (75)
T ss_dssp             CCCCCEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEE
T ss_pred             CCceEEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcee
Confidence            6667788999 99999 99999999999999999999999999998743   3567788899999997654

>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A

Probab=99.27  E-value=2.6e-11  Score=65.80  Aligned_cols=67  Identities=19%  Similarity=0.146  Sum_probs=58.8

Q ss_pred             CceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 046545            2 ELETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         2 ~~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      +|.+..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+...   ...+.+.+.|...||.+.++.
T Consensus         1 ~m~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   72 (77)
T 1y3j_A            1 NSSKCYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE   72 (77)
T ss_dssp             CCEEEEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred             CCEEEEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence            366788999 99999 99999999999999999999999999988742   467889999999999877654

>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A

Probab=99.26  E-value=7.4e-11  Score=65.34  Aligned_cols=66  Identities=18%  Similarity=0.256  Sum_probs=58.3

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEecC
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADFWSA   69 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~~   69 (93)
                      .+..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+...   ...+.+...|...||.+.+...
T Consensus         9 ~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~   79 (84)
T 1q8l_A            9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ   79 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence            4578999 99999 99999999999999999999999999998742   4678899999999998876653

>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A

Probab=99.25  E-value=1.5e-10  Score=62.27  Aligned_cols=64  Identities=16%  Similarity=0.234  Sum_probs=56.7

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      +..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+...   ...+.+...+...||.+.+..
T Consensus         3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   71 (75)
T 3cjk_B            3 SVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   71 (75)
T ss_dssp             EEEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred             EEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence            467999 99999 99999999999999999999999999998742   467889999999999876654

>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A

Probab=99.25  E-value=5.2e-11  Score=64.81  Aligned_cols=67  Identities=15%  Similarity=0.233  Sum_probs=58.3

Q ss_pred             CceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 046545            2 ELETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         2 ~~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      .+.+..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+...   ...+.+...|...||.+.+..
T Consensus         6 ~~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   77 (79)
T 1kvi_A            6 GVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TCEEEEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEECC
T ss_pred             CcEEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEecC
Confidence            345678999 99999 99999999999999999999999999998742   467889999999999876653

>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A

Probab=99.25  E-value=1.3e-10  Score=60.74  Aligned_cols=61  Identities=26%  Similarity=0.293  Sum_probs=53.9

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKA   64 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~   64 (93)
                      ....|.+ ||+|. |..++++.|..++||..+.+++..+.+.+..   ....+.+...+...||.+
T Consensus         2 ~~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   67 (69)
T 2qif_A            2 EQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             EEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence            3567999 99999 9999999999999999999999999999874   246788999999999864

>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A

Probab=99.25  E-value=9e-11  Score=62.41  Aligned_cols=62  Identities=16%  Similarity=0.202  Sum_probs=55.2

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADF   66 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~   66 (93)
                      +..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+...   ...+.+...+...||.+.+
T Consensus         4 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   70 (72)
T 1aw0_A            4 ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATL   70 (72)
T ss_dssp             EEEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEe
Confidence            467999 99999 99999999999999999999999999998743   4678899999999997654

>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A

Probab=99.23  E-value=9.9e-11  Score=65.99  Aligned_cols=64  Identities=17%  Similarity=0.142  Sum_probs=56.7

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhc---CCceEEec
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRG---GLKADFWS   68 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~---G~~~~~~~   68 (93)
                      +..|.| ||.|. |+.+|++.|..++||..+.+++..+++.+..   ....+.+.+.|..+   ||.+.++.
T Consensus         4 ~~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~   75 (90)
T 2g9o_A            4 TATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITS   75 (90)
T ss_dssp             EEEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCC
T ss_pred             EEEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeC
Confidence            467999 99999 9999999999999999999999999999874   34678899999999   59887776

>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1

Probab=99.23  E-value=1.5e-10  Score=60.75  Aligned_cols=60  Identities=27%  Similarity=0.386  Sum_probs=53.9

Q ss_pred             EEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 046545            7 ELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADF   66 (93)
Q Consensus         7 ~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~   66 (93)
                      .|.+ ||+|. |..++++.|..++||..+.+++..+.+.+...   ...+.+.+.+.+.||.+.+
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~   67 (68)
T 1cpz_A            3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV   67 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred             EEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence            5889 99999 99999999999999999999999999998742   5678899999999998764

>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A

Probab=99.22  E-value=1.4e-10  Score=62.07  Aligned_cols=65  Identities=18%  Similarity=0.249  Sum_probs=56.5

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEe
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      +.+..|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+..   ....+.+...+...||.+..+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~   74 (76)
T 1opz_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE   74 (76)
T ss_dssp             CEEEEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred             ceEEEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence            35678999 99999 9999999999999999999999999999873   346788999999999976543

>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B

Probab=99.20  E-value=1.5e-10  Score=61.50  Aligned_cols=64  Identities=20%  Similarity=0.275  Sum_probs=56.7

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEec
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG--YAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      +..|.+ ||+|. |..++++.|..++||..+.+++..+.+.+..  ....+.+.+.+...||.+.++.
T Consensus         3 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~   70 (72)
T 1fvq_A            3 EVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred             EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence            367999 99999 9999999999999999999999999998874  3467889999999999887764

>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A

Probab=99.20  E-value=1.5e-10  Score=61.21  Aligned_cols=61  Identities=18%  Similarity=0.212  Sum_probs=54.1

Q ss_pred             EEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCceEEe
Q 046545            7 ELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY--AHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         7 ~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~~~~   67 (93)
                      .|.+ ||+|. |..+|++.|..++||..+.+++..+.+.+...  ...+.+...+...||.+.+.
T Consensus         3 ~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~   67 (69)
T 2kt2_A            3 HLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA   67 (69)
T ss_dssp             CEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred             EEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence            4889 99999 99999999999999999999999999988732  47788999999999986543

>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}

Probab=99.18  E-value=1.9e-10  Score=60.09  Aligned_cols=59  Identities=19%  Similarity=0.309  Sum_probs=52.7

Q ss_pred             EEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec--CCHHHHHHHHHhcCCce
Q 046545            6 VELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY--AHRNKILKAIRRGGLKA   64 (93)
Q Consensus         6 ~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~--~~~~~i~~~i~~~G~~~   64 (93)
                      ..|.+ ||+|. |..++++.|..++||..+.+++..+.+.+...  ...+.+.+.+...||.+
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~   65 (66)
T 1yg0_A            3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV   65 (66)
T ss_dssp             EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred             EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence            57999 99999 99999999999999999999999999998743  46788999999999863

>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}

Probab=99.17  E-value=2.2e-10  Score=60.32  Aligned_cols=63  Identities=21%  Similarity=0.302  Sum_probs=54.8

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceE
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKAD   65 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~   65 (93)
                      +.+..|.+ ||+|. |..++++.|..++||..+.+++..+.+.+..   ....+.+...+...||.+.
T Consensus         2 ~~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~   69 (71)
T 2ldi_A            2 LKTQQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA   69 (71)
T ss_dssp             CEEEEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred             cEEEEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence            34567999 99999 9999999999999999999999999999873   2466788999999999753

>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}

Probab=99.17  E-value=4.6e-10  Score=63.55  Aligned_cols=67  Identities=21%  Similarity=0.247  Sum_probs=58.6

Q ss_pred             CceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEEec
Q 046545            2 ELETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         2 ~~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      .|....|.+ ||+|. |...|++.|..++||..+.+++..+.+.+...   +..+.+...|...||.+.+..
T Consensus        14 ~~~~~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~   85 (95)
T 2kkh_A           14 KLQKSYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRV   85 (95)
T ss_dssp             CSEEEEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             ceEEEEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEec
Confidence            355678999 99999 99999999999999999999999999998743   467889999999999876654

>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A

Probab=99.16  E-value=1.8e-10  Score=62.46  Aligned_cols=66  Identities=23%  Similarity=0.304  Sum_probs=57.5

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEec
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      |.+..|.+ ||+|. |..++++.|..++||..+.+++..+.+.+..   ....+.+...+...||.+.++.
T Consensus         2 m~~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   72 (80)
T 1jww_A            2 TEKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG   72 (80)
T ss_dssp             CEEEEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECC
T ss_pred             ceEEEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecC
Confidence            34578999 99999 9999999999999999999999999999873   3467889999999999877654

>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}

Probab=99.13  E-value=1.5e-10  Score=61.27  Aligned_cols=59  Identities=25%  Similarity=0.338  Sum_probs=52.3

Q ss_pred             EEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEE
Q 046545            6 VELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADF   66 (93)
Q Consensus         6 ~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~   66 (93)
                      ..|.+ ||+|. |..+|++.|..+ ||..+.+++..+.+.+..... +.+...+.+.||.+..
T Consensus         3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~   63 (67)
T 2kyz_A            3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES   63 (67)
T ss_dssp             EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred             EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence            57999 99999 999999999999 999999999999999885544 7889999999997543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.11  E-value=5.8e-10  Score=67.16  Aligned_cols=68  Identities=19%  Similarity=0.164  Sum_probs=59.9

Q ss_pred             CCceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEec
Q 046545            1 MELETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         1 m~~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      |.|++..|.+ ||+|. |..++++.|..++||..+.+++..+++.+..   ....+.+...+...||.+.+..
T Consensus         1 ~~~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~   73 (149)
T 2ew9_A            1 MAPQKCFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVME   73 (149)
T ss_dssp             CCCEEEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             CCcEEEEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeec
Confidence            7788899999 99999 9999999999999999999999999998864   2467889999999999876543

>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}

Probab=99.11  E-value=4.6e-10  Score=67.60  Aligned_cols=63  Identities=22%  Similarity=0.285  Sum_probs=56.2

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhcCCceEE
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRGGLKADF   66 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~G~~~~~   66 (93)
                      .+..|.+ ||+|. |..+|++.|+.++||..+.+|+..+++.+...   ...+.+.+.|.+.||.+.+
T Consensus        80 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~  147 (149)
T 2ew9_A           80 GNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL  147 (149)
T ss_dssp             SEEEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred             ceeEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence            3567999 99999 99999999999999999999999999998742   5788999999999998654

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=99.08  E-value=7.4e-10  Score=67.00  Aligned_cols=65  Identities=23%  Similarity=0.315  Sum_probs=58.0

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEec
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      ....|.+ ||+|. |..+|++.|..++||..+.+++..+++.+..   ...++.|.+.|...||.+.++.
T Consensus        74 ~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  143 (151)
T 1p6t_A           74 EKAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKG  143 (151)
T ss_dssp             EEEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESC
T ss_pred             cccEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcC
Confidence            3567999 99999 9999999999999999999999999999873   3578999999999999887654

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=99.05  E-value=1.9e-09  Score=68.65  Aligned_cols=65  Identities=18%  Similarity=0.239  Sum_probs=57.5

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEec
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      .+..|.| ||+|. |..+|++.|..++||..+.+++..+++.|..   ....+.|...|...||.+.++.
T Consensus       122 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~  191 (202)
T 2rop_A          122 STTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVS  191 (202)
T ss_dssp             EEEEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC-
T ss_pred             eEEEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcC
Confidence            3467999 99999 9999999999999999999999999999874   2478889999999999987765

>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=99.01  E-value=4.9e-09  Score=68.47  Aligned_cols=65  Identities=20%  Similarity=0.314  Sum_probs=58.9

Q ss_pred             EEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEecC
Q 046545            5 TVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSA   69 (93)
Q Consensus         5 ~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~   69 (93)
                      +..|.+.|+|. |+.+|+++|++++||..+.+++..+++.+.....++.+.+.|+++||.+.++..
T Consensus         7 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~   72 (222)
T 1qup_A            7 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA   72 (222)
T ss_dssp             EEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECC
T ss_pred             EEEEEEccccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccC
Confidence            35677789999 999999999999999999999999999998777899999999999999887754

>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A

Probab=98.97  E-value=1.9e-09  Score=57.45  Aligned_cols=57  Identities=16%  Similarity=0.334  Sum_probs=48.5

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceE
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKAD   65 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~   65 (93)
                      +..|.+ ||.|. |..+|++.|..++||..+.+++..+.+.+.....    .+.|..+||.+.
T Consensus         4 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~   62 (71)
T 2aj0_A            4 KTVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEH   62 (71)
T ss_dssp             EEEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTT
T ss_pred             EEEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcc
Confidence            467999 99999 9999999999999999999999999999886543    446678887643

>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1

Probab=98.88  E-value=1.9e-08  Score=66.66  Aligned_cols=65  Identities=20%  Similarity=0.314  Sum_probs=58.3

Q ss_pred             EEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEecC
Q 046545            5 TVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWSA   69 (93)
Q Consensus         5 ~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~~   69 (93)
                      +..|.|.|+|. |+.+|+++|++++||..+.+++..+++.+.....++.+.+.|+++||.+.++..
T Consensus         8 ~~~l~V~MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~   73 (249)
T 1jk9_B            8 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGA   73 (249)
T ss_dssp             EEEEECCCCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEE
T ss_pred             eEEEEEeeccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccC
Confidence            35677789999 999999999999999999999999999998777899999999999999877643

>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A

Probab=98.70  E-value=1.3e-07  Score=56.99  Aligned_cols=62  Identities=19%  Similarity=0.294  Sum_probs=53.1

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKA   64 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~   64 (93)
                      +.+..|.+ ||+|. |..++++.|..++||..+.+++..+.+.+..   ......+...+...||.+
T Consensus         5 ~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~   71 (151)
T 1p6t_A            5 QKEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (151)
T ss_dssp             CEEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             ceEEEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence            34567999 99999 9999999999999999999999999988763   246778888899999854

>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}

Probab=98.63  E-value=1.6e-07  Score=59.56  Aligned_cols=57  Identities=16%  Similarity=0.211  Sum_probs=50.7

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec---CCHHHHHHHHHhc
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY---AHRNKILKAIRRG   60 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~---~~~~~i~~~i~~~   60 (93)
                      .+..|.| ||+|. |+.+|++.|..++||..+.+++..+++.+...   ..++.+...|...
T Consensus        20 ~~~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~   81 (202)
T 2rop_A           20 VTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEAL   81 (202)
T ss_dssp             CEEEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTS
T ss_pred             EEEEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHh
Confidence            4567999 99999 99999999999999999999999999998742   4678899999887

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.62  E-value=1.7e-07  Score=69.82  Aligned_cols=62  Identities=18%  Similarity=0.186  Sum_probs=55.9

Q ss_pred             EEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEe
Q 046545            6 VELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         6 ~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      .++.+ ||+|. |..+|++.|.+++||.++.+|+.++++.+..   ..+.+++.+.+++.||++...
T Consensus         4 ~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~   70 (723)
T 3j09_A            4 RTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDE   70 (723)
T ss_dssp             EEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSC
T ss_pred             EEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCccccc
Confidence            57999 99999 9999999999999999999999999999974   357899999999999986543

>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A

Probab=92.36  E-value=0.72  Score=24.94  Aligned_cols=58  Identities=9%  Similarity=-0.040  Sum_probs=40.3

Q ss_pred             CCceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEe
Q 046545            1 MELETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG--YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         1 m~~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      |.....++.. |+.|+ ...+++++|..++.         .+.+.|..  ......+...++..|+.....
T Consensus         6 ~~~~~~~lD~rGl~CP~Pvl~~kkal~~l~~---------G~~l~V~~dd~~a~~di~~~~~~~G~~~~~~   67 (82)
T 3lvj_C            6 FSSPDHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAK   67 (82)
T ss_dssp             CSCCSEEEECTTCCTTHHHHHHHHHHHTSCT---------TCEEEEEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred             ccCCCEEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence            4444567889 99999 99999999998732         22333332  234567788889999976554

>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3

Probab=91.67  E-value=1  Score=25.30  Aligned_cols=53  Identities=13%  Similarity=0.112  Sum_probs=38.3

Q ss_pred             EEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEe
Q 046545            6 VELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG--YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         6 ~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      .++.. |+.|+ ...+++++|..++.         ++.+.|..  ......|...++..|+.....
T Consensus        27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~---------Ge~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~   83 (98)
T 1jdq_A           27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVLEI   83 (98)
T ss_dssp             EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEEEE
T ss_pred             EEEeCCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence            56889 99999 99999999998732         23333332  223577888899999986544

>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3

Probab=80.72  E-value=4.1  Score=22.78  Aligned_cols=54  Identities=13%  Similarity=0.002  Sum_probs=36.9

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEe
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVT--GYAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~--~~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      ...+.. |+.|+ ...+++++|..++.         ++.+.|.  .......+...++..|+.....
T Consensus        27 ~~~LD~rGl~CP~PvlktkkaL~~l~~---------Ge~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~   84 (97)
T 1je3_A           27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDI   84 (97)
T ss_dssp             EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred             CeEEeCCCCCCCHHHHHHHHHHHcCCC---------CCEEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence            356888 99999 99999999998732         2222322  1223456778888999986543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	93
d1cc8a_	72	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	8e-09
d1fe0a_	66	d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX	2e-08
d1qupa2	72	d.58.17.1 (A:2-73) Copper chaperone for superoxide	3e-08
d1sb6a_	64	d.58.17.1 (A:) Copper chaperone {Synechocystis sp.	3e-08
d1kvja_	79	d.58.17.1 (A:) Menkes copper-transporting ATPase {	2e-07
d1osda_	72	d.58.17.1 (A:) Mercuric ion binding protein MerP {	3e-07
d1p6ta2	79	d.58.17.1 (A:73-151) Potential copper-translocatin	3e-06
d2ggpb1	72	d.58.17.1 (B:1-72) Copper transporter domain ccc2a	1e-05
d1p6ta1	72	d.58.17.1 (A:1-72) Potential copper-translocating	2e-05
d1mwza_	73	d.58.17.1 (A:) Metal ion-transporting ATPase ZntA,	2e-05
d2qifa1	69	d.58.17.1 (A:1-69) Copper chaperone {Bacillus subt	3e-05
d1cpza_	68	d.58.17.1 (A:) Copper chaperone {Enterococcus hira	5e-05
d2aw0a_	72	d.58.17.1 (A:) Menkes copper-transporting ATPase {	9e-05

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.9 bits (109), Expect = 8e-09
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 2/65 (3%)

Query: 2  ELETVELKVEMVGIH-EKRLRKCLSKL-RGIEKVEVDANSQKVVVTGYAHRNKILKAIRR 59
          E++  +  V M        + K L+KL   + K+++    Q V V      + IL+ I++
Sbjct: 2  EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKK 61

Query: 60 GGLKA 64
           G + 
Sbjct: 62 TGKEV 66

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]} Length = 66

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 2e-08
 Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 2/63 (3%)

Query: 6  VELKVEMVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKA 64
           E  V+M      + + + L+KL G+ K ++D  ++KV +      + +L  +++ G   
Sbjct: 3  HEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTV 61

Query: 65 DFW 67
           + 
Sbjct: 62 SYL 64

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.4 bits (105), Expect = 3e-08
 Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 5  TVELKVEMVGIH-EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLK 63
               + M   +    ++ CL  + GI  +  D   Q + V      + I+  +R  G  
Sbjct: 7  EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKD 66

Query: 64 ADFWSA 69
          A    A
Sbjct: 67 AIIRGA 72

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]} Length = 64

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

 Score = 43.8 bits (103), Expect = 3e-08
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 5  TVELKVE-MVGIHE-KRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGL 62
          T++L V  +      + + K +        V+VD  S+KV +T      ++  AI   G 
Sbjct: 2  TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGH 61

Query: 63 KAD 65
          + +
Sbjct: 62 EVE 64

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (100), Expect = 2e-07
 Identities = 12/71 (16%), Positives = 27/71 (38%), Gaps = 9/71 (12%)

Query: 1  MELETVELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVT---GYAHRNKI 53
          M + +V + VE  G+        + + + K+ G+  ++V    +   +           +
Sbjct: 5  MGVNSVTISVE--GMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTL 62

Query: 54 LKAIRRGGLKA 64
           +AI   G  A
Sbjct: 63 QEAIDDMGFDA 73

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

 Score = 41.6 bits (98), Expect = 3e-07
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 9/68 (13%)

Query: 4  ETVELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVT---GYAHRNKILKA 56
          +TV L V   G+        ++K +SK+ G+ KV+V   +++ VVT         K+ KA
Sbjct: 3  QTVTLSVP--GMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKA 60

Query: 57 IRRGGLKA 64
              G  +
Sbjct: 61 TADAGYPS 68

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 79

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 39.5 bits (92), Expect = 3e-06
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 4  ETVELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVT---GYAHRNKILKA 56
          E  E  +E  G+       R+ K L+K+ G+    V+   + V V      A  + + +A
Sbjct: 2  EKAEFDIE--GMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEA 59

Query: 57 IRRGGLKADFWSAQNEL 73
          + + G K      Q+ +
Sbjct: 60 VDKLGYKLKLKGEQDSI 76

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.4 bits (87), Expect = 1e-05
 Identities = 13/67 (19%), Positives = 23/67 (34%), Gaps = 8/67 (11%)

Query: 4  ETVELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVT--GYAHRNKILKAI 57
            V L V   G+        +   L  L+G+ K ++   + +  VT       + I + I
Sbjct: 2  REVILAVH--GMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEII 59

Query: 58 RRGGLKA 64
             G   
Sbjct: 60 EDCGFDC 66

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

 Score = 37.0 bits (86), Expect = 2e-05
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 9/67 (13%)

Query: 2  ELETVELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVT---GYAHRNKIL 54
          E + + ++V   G+       R+ K L ++ G+    V+  ++ V V           I 
Sbjct: 4  EQKEIAMQVS--GMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQ 61

Query: 55 KAIRRGG 61
          + I + G
Sbjct: 62 EKIEKLG 68

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]} Length = 73

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

 Score = 36.7 bits (85), Expect = 2e-05
 Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 4  ETVELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVTGY-AHRNKILKAIR 58
               KV   G+      +++   + +L G+ +V+V   ++K+VV      R ++  A++
Sbjct: 3  TRYSWKVS--GMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQ 60

Query: 59 RGGLKA 64
          + G   
Sbjct: 61 KAGYSL 66

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]} Length = 69

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

 Score = 36.3 bits (84), Expect = 3e-05
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 9/69 (13%)

Query: 3  LETVELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHR---NKILK 55
          +E   L+VE  G+      K +   + +L G+  V V+  + KV V+  A +     I  
Sbjct: 1  MEQKTLQVE--GMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIAD 58

Query: 56 AIRRGGLKA 64
          AI   G   
Sbjct: 59 AIEDQGYDV 67

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]} Length = 68

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

 Score = 35.9 bits (83), Expect = 5e-05
 Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 7  ELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVT---GYAHRNKILKAIRR 59
          E  V+  G+       R+ + + ++ G++KV+V    +K VV          +I +AI  
Sbjct: 3  EFSVK--GMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINE 60

Query: 60 GGLKA 64
           G +A
Sbjct: 61 LGYQA 65

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 9e-05
 Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 9/68 (13%)

Query: 4  ETVELKVEMVGIH----EKRLRKCLSKLRGIEKVEVDANSQKVVVT---GYAHRNKILKA 56
          +   + ++  G+      + +   +SK  G++ + V   +    V           +  A
Sbjct: 3  QETVINID--GMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGA 60

Query: 57 IRRGGLKA 64
          I   G  A
Sbjct: 61 IEDMGFDA 68

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	93
d1fe0a_	66	ATX1 metallochaperone protein (ATOX1) {Human (Homo	99.65
d1qupa2	72	Copper chaperone for superoxide dismutase, N-termi	99.64
d2ggpb1	72	Copper transporter domain ccc2a {Baker's yeast (Sa	99.62
d1cc8a_	72	ATX1 metallochaperone protein (ATOX1) {Baker's yea	99.62
d1sb6a_	64	Copper chaperone {Synechocystis sp. pcc 6803, Scat	99.6
d2qifa1	69	Copper chaperone {Bacillus subtilis, CopZ [TaxId:	99.6
d1cpza_	68	Copper chaperone {Enterococcus hirae [TaxId: 1354]	99.59
d1kvja_	79	Menkes copper-transporting ATPase {Human (Homo sap	99.59
d1osda_	72	Mercuric ion binding protein MerP {Ralstonia metal	99.58
d1q8la_	84	Menkes copper-transporting ATPase {Human (Homo sap	99.56
d2aw0a_	72	Menkes copper-transporting ATPase {Human (Homo sap	99.55
d1p6ta2	79	Potential copper-translocating P-type ATPase CopA	99.54
d1p6ta1	72	Potential copper-translocating P-type ATPase CopA	99.53
d1mwza_	73	Metal ion-transporting ATPase ZntA, N-terminal dom	99.49
d1je3a_	97	hypothetical protein YedF (EC005) {Escherichia col	85.81
d1dcja_	81	SirA {Escherichia coli [TaxId: 562]}	84.69
d1jdqa_	98	Hypothetical protein TM0983 {Thermotoga maritima [	84.18

>d1fe0a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Human (Homo sapiens), HAH1 [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Human (Homo sapiens), HAH1 [TaxId: 9606]

Probab=99.65  E-value=6.1e-16  Score=82.63  Aligned_cols=63  Identities=21%  Similarity=0.403  Sum_probs=59.4

Q ss_pred             EEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 046545            5 TVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         5 ~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      +++|+++|+|. |+.+|+++|+.++|+ ++++|+.++++.|.+..+++.|++.|+++||+++++.
T Consensus         2 k~ef~V~M~C~~C~~~I~~aL~~~~gv-~v~v~~~~~~v~V~~~~~~~~i~~~I~~~Gy~a~lig   65 (66)
T d1fe0a_           2 KHEFSVDMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLG   65 (66)
T ss_dssp             EEEEEECCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEE
T ss_pred             CEEEEEccCchHHHHHHHHHHhcCCCc-EEEEEcCCCEEEEEeeCCHHHHHHHHHHhCCeEEEee
Confidence            57899999999 999999999999998 5999999999999999999999999999999999874

>d1qupa2 d.58.17.1 (A:2-73) Copper chaperone for superoxide dismutase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone for superoxide dismutase, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.64  E-value=2e-15  Score=81.82  Aligned_cols=64  Identities=19%  Similarity=0.307  Sum_probs=60.1

Q ss_pred             EEEEEeeCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceEEec
Q 046545            5 TVELKVEMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         5 ~~~~~igm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      +..|.|+|+|. |..+|+++|++++||.++.+|+.++++.|.+..+++.|++.|++.||++.++.
T Consensus         7 ~~~f~V~M~C~~C~~~Iek~l~~~~gV~~v~vdl~~~~v~V~~~~~~~~i~~~I~~~G~~A~l~g   71 (72)
T d1qupa2           7 EATYAIPMHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRG   71 (72)
T ss_dssp             EEEEECCCCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEEC
T ss_pred             EEEEEEccCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEeeCCHHHHHHHHHHhCCCEEEec
Confidence            45788899999 99999999999999999999999999999998999999999999999998864

>d2ggpb1 d.58.17.1 (B:1-72) Copper transporter domain ccc2a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper transporter domain ccc2a
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=1.9e-15  Score=81.90  Aligned_cols=65  Identities=20%  Similarity=0.295  Sum_probs=59.8

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEec
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVT--GYAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~--~~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      +++.|.| ||+|. |+.+|++.|.+++||.++.+|+.++++.|.  ...++++|.+.|.++||+++++.
T Consensus         2 k~v~l~V~GM~C~~C~~~Ie~~l~~~~gV~~v~V~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~a~~~~   70 (72)
T d2ggpb1           2 REVILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR   70 (72)
T ss_dssp             EEEEEECTTCCSSTTTHHHHHHHTTSTTEEEEEECTTTCEEEEEECSSCCHHHHHHHHHHTTCCCEEEE
T ss_pred             eEEEEEECCcccHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCHHHHHHHHHHhCCCeEEcc
Confidence            4678999 99999 999999999999999999999999999988  34789999999999999998765

>d1cc8a_ d.58.17.1 (A:) ATX1 metallochaperone protein (ATOX1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: ATX1 metallochaperone protein (ATOX1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.62  E-value=4.9e-15  Score=80.27  Aligned_cols=64  Identities=23%  Similarity=0.313  Sum_probs=59.9

Q ss_pred             CceEEEEEeeCcch-hHHHHHHHHhCC-CCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceE
Q 046545            2 ELETVELKVEMVGI-HEKRLRKCLSKL-RGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKAD   65 (93)
Q Consensus         2 ~~~~~~~~igm~C~-C~~~i~~~l~~~-~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~   65 (93)
                      ++++++|.|+|+|. |+.+|+++|+.+ +||.++++|+.++++.|.+.++++.|.+.|+++||++.
T Consensus         2 ~~kt~~f~V~MtC~~C~~~Ie~~L~~l~~gV~~v~v~~~~~~v~V~~~~~~~~i~~~i~~~G~~~~   67 (72)
T d1cc8a_           2 EIKHYQFNVVMTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVR   67 (72)
T ss_dssp             CCEEEEEEECCCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEE
T ss_pred             CcEEEEEEECcCcHHHHHHHHHHHHcCcCceEEEEEECCCCEEEEeecCCHHHHHHHHHHHCCccC
Confidence            46788999999999 999999999998 59999999999999999999999999999999999875

>d1sb6a_ d.58.17.1 (A:) Copper chaperone {Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Synechocystis sp. pcc 6803, Scatx1 [TaxId: 1148]

Probab=99.60  E-value=9.5e-16  Score=81.35  Aligned_cols=60  Identities=22%  Similarity=0.309  Sum_probs=57.1

Q ss_pred             EEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEecCCHHHHHHHHHhcCCceE
Q 046545            6 VELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGYAHRNKILKAIRRGGLKAD   65 (93)
Q Consensus         6 ~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~~~~~~i~~~i~~~G~~~~   65 (93)
                      ++|.| ||+|. |+.+|++.|+.++||.++.+|+.++++.+.+.++++.|.+.|.++||+++
T Consensus         3 ~~l~V~gM~C~~C~~~Ie~~l~~~~gv~~v~v~~~~~~v~v~~~~~~~~i~~~i~~~GY~ve   64 (64)
T d1sb6a_           3 IQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGHEVE   64 (64)
T ss_dssp             EEEECTTTTSSSCTHHHHHHHHHHCTTCEEEEETTTTEEEEESSSCHHHHHHHHHHHCCCCC
T ss_pred             EEEEECCccchhHHHHHHHHHhcCCCeeEEEccCCCCEEEEccCCCHHHHHHHHHHcCCCCC
Confidence            57999 99999 99999999999999999999999999999988999999999999999864

>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Bacillus subtilis, CopZ [TaxId: 1423]

Probab=99.60  E-value=7.1e-15  Score=78.91  Aligned_cols=62  Identities=26%  Similarity=0.304  Sum_probs=56.9

Q ss_pred             ceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 046545            3 LETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKA   64 (93)
Q Consensus         3 ~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~   64 (93)
                      |++.+|.| ||+|. |+.+|+++|+.++||.++.+|+..+++.+..   .++.+.|.+.|.++||++
T Consensus         1 M~~~tl~V~Gm~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~~   67 (69)
T d2qifa1           1 MEQKTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV   67 (69)
T ss_dssp             CEEEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred             CcEEEEEECCccCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            45788999 99999 9999999999999999999999999999983   368999999999999975

>d1cpza_ d.58.17.1 (A:) Copper chaperone {Enterococcus hirae [TaxId: 1354]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Copper chaperone
species: Enterococcus hirae [TaxId: 1354]

Probab=99.59  E-value=6.8e-15  Score=78.81  Aligned_cols=61  Identities=26%  Similarity=0.378  Sum_probs=56.3

Q ss_pred             EEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEe
Q 046545            7 ELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         7 ~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      +|.| ||+|. |+.+|++.|+.++||.++.+|+.++++.+..   .++++.|.+.|.++||+++++
T Consensus         3 el~V~GM~C~~C~~~Ie~~l~~~~GV~~v~V~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~vi   68 (68)
T d1cpza_           3 EFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEVI   68 (68)
T ss_dssp             EEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEEC
T ss_pred             EEEECCeEcHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEEC
Confidence            6899 99999 9999999999999999999999999999983   368999999999999998763

>d1kvja_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=8.3e-15  Score=80.56  Aligned_cols=68  Identities=16%  Similarity=0.264  Sum_probs=62.1

Q ss_pred             CCceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEec
Q 046545            1 MELETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         1 m~~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      |.+.++.|.| ||+|. |+.+|++.|+.++||..+.+|+.++++.+..   .+++++|.+.|+++||++.+..
T Consensus         5 ~~~~~~~l~V~gm~C~~C~~~ie~~l~~~~gv~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~GY~~~~~~   77 (79)
T d1kvja_           5 MGVNSVTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN   77 (79)
T ss_dssp             TTCEEEEEEEESCCSTHHHHHHHHHHHTTTTCSEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECS
T ss_pred             CCceEEEEEECCeecHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCCCHHHHHHHHHhcCCCcEeCC
Confidence            4567899999 99999 9999999999999999999999999999983   3689999999999999987765

>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Mercuric ion binding protein MerP
species: Ralstonia metallidurans CH34 [TaxId: 266264]

Probab=99.58  E-value=1.2e-14  Score=78.62  Aligned_cols=64  Identities=30%  Similarity=0.364  Sum_probs=58.6

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEe
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      +++.|.| ||+|. |+.+|++.|+.++||.++.+|+..+++.+..   .+++++|.+.|...||++.++
T Consensus         3 qt~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~a~v~   71 (72)
T d1osda_           3 QTVTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSVK   71 (72)
T ss_dssp             EEEEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEEC
T ss_pred             eEEEEEECCcccHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhcCCCeEeC
Confidence            4678999 99999 9999999999999999999999999999883   368999999999999998764

>d1q8la_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=1.5e-14  Score=80.42  Aligned_cols=67  Identities=18%  Similarity=0.259  Sum_probs=60.7

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEecCC
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWSAQ   70 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~~~   70 (93)
                      ..+.|+| ||+|. |..+|+++|+.++||.++.+|+.++++.+..   ..+.+.|.+.|..+||++.+...+
T Consensus         9 ~~v~l~V~GMtC~~C~~~Ie~~l~~~~GV~~v~vn~~~~~v~v~~~~~~~~~~~i~~~I~~~Gy~a~~~~~~   80 (84)
T d1q8la_           9 VVLKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQP   80 (84)
T ss_dssp             EEEEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCCT
T ss_pred             EEEEEEECCeEcHHHHHHHHHHHhcCCCceEEEEECCCCEEceeecccccCHHHHHHHHHHhCCccEEcCCc
Confidence            4678999 99999 9999999999999999999999999999983   368899999999999998877644

>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Menkes copper-transporting ATPase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.8e-14  Score=77.85  Aligned_cols=66  Identities=15%  Similarity=0.193  Sum_probs=58.8

Q ss_pred             CCceEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEe
Q 046545            1 MELETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         1 m~~~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      |+. +..|+| ||+|. |+.+|+++|..++||.++.+|+.++++.|..   .++++.|.+.|.++||++.+.
T Consensus         1 mt~-~~~l~V~GM~C~~C~~~Ie~~l~~~~GV~~v~v~~~~~~v~v~~d~~~~~~~~i~~~i~~~Gy~a~l~   71 (72)
T d2aw0a_           1 LTQ-ETVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS   71 (72)
T ss_dssp             CCE-EEEEEEECCCSHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSEEEEC
T ss_pred             CcE-EEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEECCCCEEEEEECCCCCCHHHHHHHHHhhCCCcEeC
Confidence            443 468999 99999 9999999999999999999999999999973   368999999999999988653

>d1p6ta2 d.58.17.1 (A:73-151) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.54  E-value=2.7e-14  Score=78.43  Aligned_cols=66  Identities=23%  Similarity=0.306  Sum_probs=60.2

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCceEEecCC
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKADFWSAQ   70 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~~~~~~~   70 (93)
                      ++.|.| ||+|. |+.+|++.|..++||.++.+|+.++++.|..   .++.++|.+.|.++||++.+.+..
T Consensus         3 k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~   73 (79)
T d1p6ta2           3 KAEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ   73 (79)
T ss_dssp             EEEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSS
T ss_pred             EEEEEECCcccHHHHHHHHHHHhcCCCcEEEEEEeCCCEEEEEECCCCCCHHHHHHHHHHHCCceEECCcc
Confidence            578999 99999 9999999999999999999999999999983   368999999999999999887643

>d1p6ta1 d.58.17.1 (A:1-72) Potential copper-translocating P-type ATPase CopA (YvgX) {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Potential copper-translocating P-type ATPase CopA (YvgX)
species: Bacillus subtilis [TaxId: 1423]

Probab=99.53  E-value=3.3e-14  Score=76.79  Aligned_cols=61  Identities=20%  Similarity=0.308  Sum_probs=56.3

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe---cCCHHHHHHHHHhcCCce
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG---YAHRNKILKAIRRGGLKA   64 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~---~~~~~~i~~~i~~~G~~~   64 (93)
                      +++.|.| ||+|. |..+|++.|.+++||.++.+|+.++++.+..   ..+.+++.+.|+++||++
T Consensus         6 ~~~~l~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~d~~~~~~~~i~~~i~~~Gy~v   71 (72)
T d1p6ta1           6 KEIAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV   71 (72)
T ss_dssp             EEEEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred             eEEEEEECCeecHHHHHHHHHHHHcCCCcEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHHhCCcc
Confidence            5678999 99999 9999999999999999999999999999973   467999999999999975

>d1mwza_ d.58.17.1 (A:) Metal ion-transporting ATPase ZntA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: HMA, heavy metal-associated domain
family: HMA, heavy metal-associated domain
domain: Metal ion-transporting ATPase ZntA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=9.2e-14  Score=75.22  Aligned_cols=64  Identities=20%  Similarity=0.280  Sum_probs=57.2

Q ss_pred             eEEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEec-CCHHHHHHHHHhcCCceEEe
Q 046545            4 ETVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTGY-AHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         4 ~~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~~-~~~~~i~~~i~~~G~~~~~~   67 (93)
                      .++.|.| ||+|+ |..+|++.|..++||..+.+|+.++++.|... ...+.|.+.|.++||.+...
T Consensus         3 ~k~~~~V~Gm~C~~C~~~Ie~~l~~~~gV~~v~v~~~~~~~~v~~~~~~~~~i~~~i~~~GY~v~~~   69 (73)
T d1mwza_           3 TRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE   69 (73)
T ss_dssp             CCEEEECTTCCSHHHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCCCCBC
T ss_pred             CEEEEEECCcCCHHHHHHHHHHHhcCCCceEEEEECCCCEEEEEECCCCHHHHHHHHHHcCCcccCC
Confidence            3578999 99999 99999999999999999999999999999854 35788999999999986544

>d1je3a_ d.68.3.3 (A:) hypothetical protein YedF (EC005) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: hypothetical protein YedF (EC005)
species: Escherichia coli [TaxId: 562]

Probab=85.81  E-value=1  Score=23.91  Aligned_cols=54  Identities=13%  Similarity=0.002  Sum_probs=38.5

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEE--ecCCHHHHHHHHHhcCCceEEe
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVT--GYAHRNKILKAIRRGGLKADFW   67 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~--~~~~~~~i~~~i~~~G~~~~~~   67 (93)
                      .+++.+ |+.|+ ...+++++|.+++-         ++.+.|.  .......|...++..|+...-.
T Consensus        27 d~~LD~~G~~CP~Pll~~k~~l~~l~~---------Ge~L~V~~dd~~a~~di~~~~~~~g~~v~~~   84 (97)
T d1je3a_          27 DYRLDMVGEPCPYPAVATLEAMPQLKK---------GEILEVVSDCPQSINNIPLDARNHGYTVLDI   84 (97)
T ss_dssp             EEEECSBCCSSSSSTHHHHHHTTTCCS---------SCEEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred             ceEEeCCCCcCCHHHHHHHHHHHcCCC---------CCEEEEEeCCccHHHHHHHHHHHcCCEEEEE
Confidence            357888 99999 99999999988742         2223333  2234567888899999987544

>d1dcja_ d.68.3.3 (A:) SirA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: SirA
species: Escherichia coli [TaxId: 562]

Probab=84.69  E-value=1.4  Score=22.24  Aligned_cols=55  Identities=9%  Similarity=-0.036  Sum_probs=39.1

Q ss_pred             EEEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceEEec
Q 046545            5 TVELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG--YAHRNKILKAIRRGGLKADFWS   68 (93)
Q Consensus         5 ~~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~~~~   68 (93)
                      ..++.. |+.|+ ...+++++|.+++.         .+.+.|..  ......+...++..|+......
T Consensus         9 ~~~lD~~G~~CP~P~l~~k~al~~~~~---------G~~l~v~~dd~~a~~di~~~~~~~g~~~~~~~   67 (81)
T d1dcja_           9 DHTLDALGLRCPEPVMMVRKTVRNMQP---------GETLLIIADDPATTRDIPGFCTFMEHELVAKE   67 (81)
T ss_dssp             SEEECCTTCCTTHHHHHHHHHHHHCCT---------TCCEEEEECSTTHHHHHHHHHHHTTCEEEEEE
T ss_pred             CeEEECCCCCCCHHHHHHHHHHHhCCC---------CCEEEEEeCCCcHHHHHHHHHHHcCCEEEEEE
Confidence            467888 99999 99999999998743         23333332  2346778888999999865443

>d1jdqa_ d.68.3.3 (A:) Hypothetical protein TM0983 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a+b)
fold: IF3-like
superfamily: SirA-like
family: SirA-like
domain: Hypothetical protein TM0983
species: Thermotoga maritima [TaxId: 2336]

Probab=84.18  E-value=1.8  Score=22.85  Aligned_cols=51  Identities=14%  Similarity=0.153  Sum_probs=37.5

Q ss_pred             EEEEe-eCcch-hHHHHHHHHhCCCCeeEEEEecCCCEEEEEe--cCCHHHHHHHHHhcCCceE
Q 046545            6 VELKV-EMVGI-HEKRLRKCLSKLRGIEKVEVDANSQKVVVTG--YAHRNKILKAIRRGGLKAD   65 (93)
Q Consensus         6 ~~~~i-gm~C~-C~~~i~~~l~~~~Gv~~~~~~~~~~~v~v~~--~~~~~~i~~~i~~~G~~~~   65 (93)
                      .++.+ |..|+ ...+++++|..++.         ++.+.|..  ......|...+...|+...
T Consensus        27 ~~LD~rG~~CP~Pll~~kkal~~l~~---------Ge~L~V~~dd~~a~~dI~~~~~~~g~~i~   81 (98)
T d1jdqa_          27 KTLDVRGEVCPVPDVETKRALQNMKP---------GEILEVWIDYPMSKERIPETVKKLGHEVL   81 (98)
T ss_dssp             EEEECSSCCSSHHHHHHHHHHHTCCT---------TCEEEEEESSCTHHHHHHHHHHHSSCCEE
T ss_pred             eeEECCCCcCCHHHHHHHHHHHcCCC---------CCEEEEEeCCcchHHHHHHHHHHcCCEEE
Confidence            46888 99999 99999999998743         23333332  2346778888999999863