Citrus Sinensis ID: 046591

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-
MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLVISHRLDKMPSSSKPTKIDFILNAFRQFEQQSSGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFKSNASVMVMQQQASVVEEMVIQSPGLVLK
cEEEEEEcHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccEEHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccEEEEEEccccHHHHHHHHHcccccccccEEEEEEccccccccccHHHHccccccccccccccccHHHHHHHHHHHHccccEEEEEEEEEcccccHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHccccEEEEEEccccccccccccccccEEEEEEccccccHHHHHHHHHHHHccccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccHHHHHHHHHHcccccEEEEccccccccccccccccccccccccHHHHHHHcccccccEEEEEEcccccccccccccccccccc
cEEEEEEcHHHHcccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcHHHHHEHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcHHccccccccccccccEEEEEEEccccccHHHHHHHHHcccccccEEEEEEEEEEccccccHHEEHccccccccccccccHHHHHHHHHHHHHHccccEEEEEEEEEcccHHHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHccccEEEEEEEccccccccccccccccEEEEEEEEccccHHHHHHHHHHHHcccccEEEEEEEEccccccccHHHHHHcHHHHHHHHHHHcccccEEEEEEEEccHHHHHHHHHHHcccccEEEEEccccccccHHcccHcHHHcccccccHHHcccccccccEEEEEEEEcccccccccccccccccc
mlagialgpsflghnekvskkiftpkTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVnqfdpldgelgesVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMrqtpegkrlkneHVIALNIMVVCSYFVsesmgligfwgpiilgvitplippmgslltdKMEAFVWSVFlpcflinsgkgvnlfSTTLTGFLIVEFLIWVATTVKLFAIIIPslyykmpfmDALSLGLLLncrgiydiqifsrsnrrkmlsdeSYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLgasifpqrpmelHVLNLEeyvghslplvishrldkmpssskptkIDFILNAFRQFeqqssgslslqcftatapydsmhedicsmtfekctslviipfqktnSYVIKKITKKVlkmapcsvgilfdrrefmnsrhifTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDLIEEKNDLNLISGLrmstmdskNVRYIKHSVKEGSETFHVINSIGNDFELIltgrthdycspvlsglvEWSESQELGVVGDIlassdfksnASVMVMQQQASVVEEMVIQSPGLVLK
mlagialgpsflghnekVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCRGIYDIqifsrsnrrkMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYkrrtiqhtrhdaELRILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLVISHRLDKMPSSSKPTKIDFILNAFRQFEQQSSGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFKSNASVMVMQQQASVVEEMVIQSPGLVLK
MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRlalsssltntllnmtlgtvlvvlSDIQEAGIGSINLLNLMSFMLivifivfiiRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLVISHRLDKMPSSSKPTKIDFILNAFRQFEQQSSGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFKSNasvmvmqqqasvveemvIQSPGLVLK
******LGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLVISHRL**********KIDFILNAFRQFEQQ*SGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDF*****************************
MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTS***********************ACIYEENNVATIINVLG**********LHVLNLEEY****************************LNAFRQFEQQSSGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRRE***********SAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFA************NDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHD***********WSESQELGVVGDILASSDFKSNASVMVMQ*******************
MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLVISHRLDKMPSSSKPTKIDFILNAFRQFEQQSSGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFKSNASVMVMQQQASVVEEMVIQSPGLVLK
MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLVISHRLDK******PTKIDFILNAFRQFEQQSSGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFKSNASVMVMQQQASV**************
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLVISHRLDKMPSSSKPTKIDFILNAFRQFEQQSSGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFKSNASVMVMQQQASVVEEMVIQSPGLVLK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query711 2.2.26 [Sep-21-2011]
Q9M008784 Cation/H(+) antiporter 26 yes no 0.984 0.892 0.332 1e-118
Q9M007767 Cation/H(+) antiporter 27 no no 0.967 0.897 0.322 1e-115
Q9SIT5821 Cation/H(+) antiporter 15 no no 0.956 0.828 0.321 1e-110
Q9FFB8822 Cation/H(+) antiporter 3 no no 0.962 0.832 0.310 1e-98
Q9FYC1817 Cation/H(+) antiporter 4 no no 0.962 0.837 0.310 3e-98
Q9LMJ1829 Cation/H(+) antiporter 14 no no 0.960 0.823 0.331 6e-97
O22920831 Cation/H(+) symporter 13 no no 0.957 0.819 0.317 3e-95
Q58P69783 Cation/H(+) antiporter 10 no no 0.938 0.851 0.328 1e-92
Q1HDT2859 Cation/H(+) antiporter 24 no no 0.953 0.789 0.287 1e-87
Q9FGH6857 Cation/H(+) antiporter 25 no no 0.973 0.807 0.281 2e-83
>sp|Q9M008|CHX26_ARATH Cation/H(+) antiporter 26 OS=Arabidopsis thaliana GN=CHX26 PE=2 SV=2 Back     alignment and function desciption
 Score =  426 bits (1096), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/716 (33%), Positives = 410/716 (57%), Gaps = 16/716 (2%)

Query: 1   MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGR 60
           +LAGI LGPS LG N  + KK+F  ++  +I  FE+   ++I+++++ + D+ ++ + G+
Sbjct: 70  ILAGIFLGPSALGQNIDLVKKLFNTRSYFIIESFEAISFMFISYISTAQVDMGVIKRGGK 129

Query: 61  LGIVIGIGSYLLPLIVTSLSTVIV--NQFDPLDGELGESVQMVTGLESTISFYGILEILT 118
           L I+ G+  +L P +V +++  ++  N    +     E +  +   +S + F     +L+
Sbjct: 130 LAIINGLSLFLFPYVVGAIACTVITSNIRGTVAKNNPEQLHNLLTNQSVVYFQVAYSVLS 189

Query: 119 DMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFI 178
           ++K+LNSE GRLALSS +           +L+               L   + +L+++ I
Sbjct: 190 NLKMLNSEPGRLALSSIMVANCFGWGFFLLLITFDSFLHQNYSKTTYLPTFTKVLLLVGI 249

Query: 179 VFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPL 238
           V + RP+  W++++TPEGK+LK  H+  + +M+  + F+SE++G     G + LG++TP 
Sbjct: 250 VVVCRPIFNWIVKRTPEGKKLKASHLCTICVMLCTATFLSETVGFPYVVGSVALGLVTPK 309

Query: 239 IPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAI 298
            PP G+ LTDK+ +F ++V +PC++I  G  V+ FS  L   + +EFLI+  +  K  +I
Sbjct: 310 TPPFGTGLTDKIGSFCYAVLMPCYVIGIGNKVDFFSFNLRDIISLEFLIFTISAAKFASI 369

Query: 299 IIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIA 358
           ++PSLY+++P   A+ +G ++  +GIYD+QIF +    K +S E++G+MV++AM+ S I 
Sbjct: 370 VLPSLYFQVPISHAVIVGFIVCIQGIYDVQIFKQLLNYKNISHEAFGIMVISAMVHSTIF 429

Query: 359 LPLLRVFYD-TSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQRP 417
             +++  Y    R+++ Y+R+T+QH   +  L+IL C Y    V  I+ VL  S  P   
Sbjct: 430 TAIVKNLYGWVQRKHITYRRQTVQHYEPNKPLKILTCFYHRETVPPILTVLELSTCPSSA 489

Query: 418 MELHV--LNLEEYVGHSLPLVISHRLDKM-PSSSKPTKIDFILNAFRQFE--QQSSGSLS 472
               +  +NLEE   +++PL+I H       SS+  ++ D I  AF +F        ++S
Sbjct: 490 SSHSIVSVNLEELEQNNVPLLIQHHPGHNDESSTSSSRRDQISKAFEKFRSGHDLQENVS 549

Query: 473 LQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILF 532
           ++CFTA AP  +MHED+C++ FEK T L+I       +   +++ + V   +P SV +L 
Sbjct: 550 VECFTAVAPSKTMHEDVCALAFEKETDLIIFGMADGTA-AERRLCRNVRNASPSSVAVLM 608

Query: 533 DRREFMNSRHIFTHRS----AINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAV 588
           D+    + +++ T        IN+C IFLGG DDRE LA+  RMT      LT+++    
Sbjct: 609 DQGRLPDFKNMGTAMKNGSMRINICSIFLGGADDRETLAFAVRMTNQPYVNLTVLKLVDG 668

Query: 589 NHAT--KDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELIL 646
            + +   D++E++ D   I   R  TM+  NV   +  +KE S+  +++   GN+++LI+
Sbjct: 669 ENVSHLNDVVEKRLDFRTIEKFRQDTMNKHNVALREVWIKEASDLVNLLREEGNNYDLIM 728

Query: 647 TGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFKSNASVMVMQQQ-ASVVEEM 701
            G  H+    VL GL  WSE +ELG +GD+L S D K +ASV+ +QQQ +SVVEE+
Sbjct: 729 VGIRHEKSFEVLQGLSVWSEIEELGEIGDLLVSRDLKLSASVLAVQQQLSSVVEEV 784
May operate as a cation/H(+) antiporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9M007|CHX27_ARATH Cation/H(+) antiporter 27 OS=Arabidopsis thaliana GN=CHX27 PE=2 SV=2 Back     alignment and function description
>sp|Q9SIT5|CHX15_ARATH Cation/H(+) antiporter 15 OS=Arabidopsis thaliana GN=CHX15 PE=2 SV=1 Back     alignment and function description
>sp|Q9FFB8|CHX3_ARATH Cation/H(+) antiporter 3 OS=Arabidopsis thaliana GN=CHX3 PE=2 SV=1 Back     alignment and function description
>sp|Q9FYC1|CHX4_ARATH Cation/H(+) antiporter 4 OS=Arabidopsis thaliana GN=CHX4 PE=2 SV=1 Back     alignment and function description
>sp|Q9LMJ1|CHX14_ARATH Cation/H(+) antiporter 14 OS=Arabidopsis thaliana GN=CHX14 PE=2 SV=1 Back     alignment and function description
>sp|O22920|CHX13_ARATH Cation/H(+) symporter 13 OS=Arabidopsis thaliana GN=CHX13 PE=1 SV=1 Back     alignment and function description
>sp|Q58P69|CHX10_ARATH Cation/H(+) antiporter 10 OS=Arabidopsis thaliana GN=CHX10 PE=2 SV=2 Back     alignment and function description
>sp|Q1HDT2|CHX24_ARATH Cation/H(+) antiporter 24 OS=Arabidopsis thaliana GN=CHX24 PE=2 SV=2 Back     alignment and function description
>sp|Q9FGH6|CHX25_ARATH Cation/H(+) antiporter 25 OS=Arabidopsis thaliana GN=CHX25 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query711
224140527756 cation proton exchanger [Populus trichoc 0.971 0.914 0.440 1e-163
255571495751 monovalent cation:proton antiporter, put 0.907 0.858 0.400 1e-143
359478513805 PREDICTED: cation/H(+) antiporter 15-lik 0.976 0.862 0.345 1e-123
225434431777 PREDICTED: cation/H(+) antiporter 15-lik 0.987 0.903 0.364 1e-123
449457486798 PREDICTED: cation/H(+) antiporter 15-lik 0.966 0.860 0.345 1e-123
297745810 1283 unnamed protein product [Vitis vinifera] 0.976 0.540 0.345 1e-123
147819592 1443 hypothetical protein VITISV_020324 [Viti 0.987 0.486 0.364 1e-123
297745812780 unnamed protein product [Vitis vinifera] 0.984 0.897 0.364 1e-122
255543675 818 monovalent cation:proton antiporter, put 0.976 0.848 0.343 1e-119
357491315 820 Cation proton exchanger [Medicago trunca 0.970 0.841 0.351 1e-117
>gi|224140527|ref|XP_002323634.1| cation proton exchanger [Populus trichocarpa] gi|222868264|gb|EEF05395.1| cation proton exchanger [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 312/708 (44%), Positives = 482/708 (68%), Gaps = 17/708 (2%)

Query: 1   MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGR 60
           +L GIA+ PSFLGH E+++K +F P++ +++  FE FGL+++ F+ S+R D++++ K G+
Sbjct: 47  ILGGIAISPSFLGHMERINKYLFAPRSVMILDTFEVFGLVFVLFLLSLRLDITVVKKCGK 106

Query: 61  LGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDM 120
           L +VIG+ S+L+P ++T+L    +  F  L  EL E V +V  + ST SF+ +  IL D+
Sbjct: 107 LAVVIGLASFLVPTVITTLIASYLRGFFKL--ELHEEVHVVAVIISTTSFHVVFSILEDL 164

Query: 121 KLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAG-IGSIN--LLNLMSFMLIVIF 177
           KLLNSELGRLALSSS+ + L + +    +V L++ +EA  +GS    +L  ++ + +++ 
Sbjct: 165 KLLNSELGRLALSSSMVSGLFSWSF---IVFLANFKEASKLGSKKGIILAQITRIPMIMI 221

Query: 178 IVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITP 237
           IVF  RP+M WM+R+TPEG+ LK  +++ ++ MV+   F+ E  G    +GP++LG+ TP
Sbjct: 222 IVFAFRPMMWWMVRRTPEGQPLKQSYILIISTMVLFCGFLGEINGHHFLFGPLVLGLATP 281

Query: 238 LIPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFA 297
             P + S L +K+  FV S  +PCFL++ G+G+NLF  T         L++++T  KL A
Sbjct: 282 DNPQLHSCLMEKIGTFVNSFLVPCFLVDVGRGINLFLATFKHVAFALMLVFISTLTKLSA 341

Query: 298 IIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAI 357
           II  SLYYKMPF DALSLGL+LNC+G  D  +++ +N+ + L  E + ++V+TAML+S  
Sbjct: 342 IIATSLYYKMPFRDALSLGLILNCKGFVDALLYNAANKFEGLKTELFSILVVTAMLQSVF 401

Query: 358 ALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQR- 416
              L+R+ YD SRRY+AYK RTIQ+T   +EL+I+AC++++++V +IINVL A+  P R 
Sbjct: 402 VTLLVRLLYDPSRRYIAYKPRTIQNTGLRSELQIVACLHQQDDVRSIINVLEATN-PTRA 460

Query: 417 -PMELHVLNLEEYVGHSLPLVISHRLDKMPSSSKPTKIDFILNAFRQFEQQSSGSLSLQC 475
            P+ ++VLNL++ +  +LPL ISHRL+ + S+    KID + NAF QFEQQ+ G +++QC
Sbjct: 461 SPIAVYVLNLKKLIEGALPLFISHRLNNISSAE---KIDIVSNAFYQFEQQNQGLVTVQC 517

Query: 476 FTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSYVIKKITKKVLKMAPCSVGILFDRR 535
           FT+ APY +MH+D+C+M  EK TSLVI+PFQ+ +S  ++ + + +L  APCSV +L +R 
Sbjct: 518 FTSFAPYATMHDDVCTMVLEKSTSLVIVPFQRYDSPSMRAVNRNILVKAPCSVALLVNRG 577

Query: 536 EFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATKDL 595
                R+I + R  + VCV+F+GG DDRE LAY  RM+G  N  L ++R  +V+    DL
Sbjct: 578 NL--DRYILSGRLTMKVCVVFIGGADDRETLAYAQRMSGHPNIRLIVLRLVSVDQTFTDL 635

Query: 596 IEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCS 655
           IE++ + N+I+  R++  D   V Y +  V+ G++T  ++ ++ NDF+LI+ GR HD  S
Sbjct: 636 IEKRRNSNMINEFRLNNNDCPRVSYKEEMVRHGNDTVRLLGAMCNDFDLIMVGRRHDPDS 695

Query: 656 PVLSGLVEWSE-SQELGVVGDILASSDFKSNASVMVMQQQASVVEEMV 702
             L GL EW E  Q+LGV+GDI+AS DF+  AS++V+QQQASVV EM+
Sbjct: 696 TQLIGLSEWGEIDQDLGVIGDIMASKDFECKASILVVQQQASVVVEMI 743

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255571495|ref|XP_002526695.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223533995|gb|EEF35717.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|359478513|ref|XP_002277533.2| PREDICTED: cation/H(+) antiporter 15-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|225434431|ref|XP_002277592.1| PREDICTED: cation/H(+) antiporter 15-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449457486|ref|XP_004146479.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] gi|449515335|ref|XP_004164705.1| PREDICTED: cation/H(+) antiporter 15-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297745810|emb|CBI15866.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|147819592|emb|CAN59820.1| hypothetical protein VITISV_020324 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297745812|emb|CBI15868.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255543675|ref|XP_002512900.1| monovalent cation:proton antiporter, putative [Ricinus communis] gi|223547911|gb|EEF49403.1| monovalent cation:proton antiporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357491315|ref|XP_003615945.1| Cation proton exchanger [Medicago truncatula] gi|355517280|gb|AES98903.1| Cation proton exchanger [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query711
TAIR|locus:2007392829 CHX14 "cation/hydrogen exchang 0.943 0.809 0.321 8.6e-88
TAIR|locus:2060827831 ATCHX13 [Arabidopsis thaliana 0.943 0.807 0.312 2.9e-87
TAIR|locus:2082102783 CHX10 "cation/H+ exchanger 10" 0.694 0.630 0.332 2.4e-85
TAIR|locus:2054152821 CHX15 "cation/hydrogen exchang 0.856 0.741 0.299 1.3e-82
TAIR|locus:2172631822 CHX3 "cation/H+ exchanger 3" [ 0.628 0.543 0.292 2.7e-82
TAIR|locus:2031968867 CHX23 "cation/H+ exchanger 23" 0.814 0.667 0.255 1.5e-80
TAIR|locus:2166168859 CHX24 "cation/H+ exchanger 24" 0.708 0.586 0.258 1.3e-76
TAIR|locus:2082142817 CHX4 "cation/H+ exchanger 4" [ 0.798 0.695 0.293 8.4e-74
TAIR|locus:2160457810 CHX18 "cation/H+ exchanger 18" 0.811 0.712 0.256 9.7e-74
TAIR|locus:2171238857 CHX25 "cation/H+ exchanger 25" 0.708 0.588 0.261 5.8e-72
TAIR|locus:2007392 CHX14 "cation/hydrogen exchanger 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 226/704 (32%), Positives = 362/704 (51%)

Query:     1 MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGR 60
             +LAGI LGPS  G +    +       ++ +    + G     F+  +R D SI+ K+G 
Sbjct:    83 VLAGIILGPSLFGQSSAYMQMFLPISGKITLQTLSNLGFFIHLFLLGLRIDASIIRKAGS 142

Query:    61 LGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDM 120
               I+IG  SY LP  + +L+ + +     L  ++   +  V  L +  SF     +L ++
Sbjct:   143 KAILIGTASYALPFSLGNLTVLFLKNTYNLPPDVVHCISTVISLNAMTSFPVTTTVLAEL 202

Query:   121 KLLNSELGRXXXXXXXXXXXXXXXXXXXXXXXSDIQEAGIGSI-NLLNLMSFMLXXXXXX 179
              +LNS+LGR                         +++  + S+ + + + + +L      
Sbjct:   203 NILNSDLGRLATNCSIVCEAFSWIVALVFRMF--LRDGTLASVWSFVWVTALILVIFFVC 260

Query:   180 XXXRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSY-FVSESMGLIGFWGPIILGVITPL 238
                RP ++W+  +         E      IMV+ +    SE +G+   +G   LGV  P 
Sbjct:   261 ---RPAIIWLTERRSISIDKAGEIPFFPIIMVLLTISLTSEVLGVHAAFGAFWLGVSLPD 317

Query:   239 IPPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWVATTVKLFAI 298
              PP+G+ LT K+E F  S+ LPCF+  SG   N F    +   I+E +I +    K    
Sbjct:   318 GPPLGTGLTTKLEMFATSLMLPCFISISGLQTNFFIIGESHVKIIEAVILITYGCKFLGT 377

Query:   299 IIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIA 358
                S Y  +   DA SL LL+ C+G+ +I         K+L+ E + ++++T +L + I+
Sbjct:   378 AAASAYCNIQIGDAFSLALLMCCQGVIEIYTCVMWKDEKVLNTECFNLLIITLLLVTGIS 437

Query:   359 LPLLRVFYDTSRRYVAYKRRTIQHTRH-DAELRILACIYEENNVATIINVLGASIFPQR- 416
               L+   YD S+RY +  +RTI  TR  + + R+L C+Y   NV +++N+L AS +P R 
Sbjct:   438 RFLVVCLYDPSKRYRSKSKRTILDTRQRNLQFRLLLCVYNVENVPSMVNLLEAS-YPSRF 496

Query:   417 -PMELHVLNLEEYVG--HSLPLVISHRLDKM-PSSSKPTKIDFILNAFRQFEQQSSGSLS 472
              P+ +  L+L E  G  H++ LV  H+++K+ P++ + T I   +N F++FEQQ+ G+L 
Sbjct:   497 SPISVFTLHLVELKGRAHAV-LVPHHQMNKLDPNTVQSTHI---VNGFQRFEQQNQGTLM 552

Query:   473 LQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQK------TNSYV---IKKITKKVLKM 523
              Q FTA AP+ S+++DIC++  +K  +L++IPF K      T  +V   I+ I   VL+ 
Sbjct:   553 AQHFTAAAPFSSINDDICTLALDKKATLIVIPFHKQYAIDGTVDHVNPSIRNINLNVLEK 612

Query:   524 APCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTII 583
             APCSVGI  DR E    R +    +  NV VIF+ G DD EALA+  R+       +T+I
Sbjct:   613 APCSVGIFIDRGETEGRRSVLMSYTWRNVAVIFIEGRDDAEALAFSMRIAEHPEVSVTMI 672

Query:   584 RF-----FAVNHATKDLIEEKNDLNLISGLRMSTMDSKNVRYIKHSVKEGSETFHVINSI 638
              F        NH   D+  E  +  LI+  +   M    + Y +  V++G ET  VI+S+
Sbjct:   673 HFRHKSSLQQNHVV-DVESELAESYLINDFKNFAMSKPKISYREEIVRDGVETTQVISSL 731

Query:   639 GNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDF 682
             G+ F+L++ GR HD  S VL GL +WSE  ELGV+GD+ ASSDF
Sbjct:   732 GDSFDLVVVGRDHDLESSVLYGLTDWSECPELGVIGDMFASSDF 775
GO:0005886 "plasma membrane" evidence=ISM
GO:0006812 "cation transport" evidence=IEA;IC
GO:0015299 "solute:hydrogen antiporter activity" evidence=IEA
GO:0015385 "sodium:hydrogen antiporter activity" evidence=ISS
GO:0016021 "integral to membrane" evidence=IEA
GO:0035725 "sodium ion transmembrane transport" evidence=ISS
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005451 "monovalent cation:hydrogen antiporter activity" evidence=NAS
GO:0006814 "sodium ion transport" evidence=RCA
GO:0010351 "lithium ion transport" evidence=RCA
TAIR|locus:2060827 ATCHX13 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082102 CHX10 "cation/H+ exchanger 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2054152 CHX15 "cation/hydrogen exchanger 15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172631 CHX3 "cation/H+ exchanger 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031968 CHX23 "cation/H+ exchanger 23" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2166168 CHX24 "cation/H+ exchanger 24" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082142 CHX4 "cation/H+ exchanger 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160457 CHX18 "cation/H+ exchanger 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171238 CHX25 "cation/H+ exchanger 25" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M008CHX26_ARATHNo assigned EC number0.33240.98450.8928yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query711
PLN03159832 PLN03159, PLN03159, cation/H(+) antiporter 15; Pro 1e-135
pfam00999370 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchang 9e-21
COG0475397 COG0475, KefB, Kef-type K+ transport systems, memb 2e-17
TIGR00932273 TIGR00932, 2a37, transporter, monovalent cation:pr 2e-08
>gnl|CDD|215608 PLN03159, PLN03159, cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
 Score =  419 bits (1079), Expect = e-135
 Identities = 242/730 (33%), Positives = 406/730 (55%), Gaps = 46/730 (6%)

Query: 1   MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGR 60
           +L G+ LGPS LG +E  +  IF  ++ +V+    + GL+Y  F+  V  D+S++ ++G+
Sbjct: 74  ILGGVILGPSVLGQSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGK 133

Query: 61  LGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGIL-EILTD 119
             + I I    LP  +    + I +Q      +   +  +  G+  +++ + +L  IL +
Sbjct: 134 KALAIAIAGMALPFCIGLAFSFIFHQVSRNVHQ--GTFILFLGVALSVTAFPVLARILAE 191

Query: 120 MKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIV 179
           +KL+N+ELGR+A+S++L N +    L  + + L++     + S  L  L+S +  V+F  
Sbjct: 192 IKLINTELGRIAMSAALVNDMCAWILLALAIALAENDSTSLAS--LWVLLSSVAFVLFCF 249

Query: 180 FIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLI 239
           +++RP + W++R+TPEG+     ++  +   V+ S F+++++G    +G  + G++ P  
Sbjct: 250 YVVRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIP-N 308

Query: 240 PPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLFSTTLTGFLIVEFLIWV---ATTVKLF 296
            P+G  L +K+E FV  + LP F   SG   N+  T + G      L+ V   A+  K+ 
Sbjct: 309 GPLGVTLIEKLEDFVSGLLLPLFFAISGLKTNV--TKIQGPATWGLLVLVIIMASAGKIM 366

Query: 297 AIIIPSLYYKMPFMDALSLGLLLNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSA 356
             II + +Y MPF + ++LG L+N +G+ ++ + +    +++L DES+ VMV+ A+  +A
Sbjct: 367 GTIIIAFFYTMPFREGITLGFLMNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTA 426

Query: 357 IALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEENNVATIINVLGASIFPQR 416
           +  P++ V Y  +RR V YKRRTIQ ++HDAELR+L C++   NV TIIN+L AS   +R
Sbjct: 427 LITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTPRNVPTIINLLEASHPTKR 486

Query: 417 -PMELHVLNLEEYVGHSLPLVISH--RLDKMPSSSK-PTKIDFILNAFRQFEQQSSGSLS 472
            P+ ++VL+L E  G +  ++I H  R    P+ ++   + D I+NAF  +E Q +G +S
Sbjct: 487 SPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYE-QHAGCVS 545

Query: 473 LQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKTNSY---------VIKKITKKVLKM 523
           +Q  TA +PY +MHED+C++  +K  SL+IIPF K  +            + + + VL  
Sbjct: 546 VQPLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLAN 605

Query: 524 APCSVGILFDRREFMNSRHIFTHRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTII 583
           APCSVGIL D R    +  + +++ + +V V+F GGPDDREALAY  RM+      LT++
Sbjct: 606 APCSVGILVD-RGLSGATRLASNQVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVM 664

Query: 584 RFFAVNHA--------------------TKDLIEEKNDLNLISGLRMSTMDSKNVRYIKH 623
           RF     A                    T    E + D   I+  R     ++++ Y + 
Sbjct: 665 RFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYINEFRARNAGNESIVYTEK 724

Query: 624 SVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFK 683
            V  G ET   I S+ +  +L + GR     SP+ +GL +WSE  ELG +GD+LASSDF 
Sbjct: 725 VVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFA 784

Query: 684 SNASVMVMQQ 693
           +  SV+V+QQ
Sbjct: 785 ATVSVLVVQQ 794

Length = 832
>gnl|CDD|216235 pfam00999, Na_H_Exchanger, Sodium/hydrogen exchanger family Back     alignment and domain information
>gnl|CDD|223551 COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|233195 TIGR00932, 2a37, transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 711
PLN03159832 cation/H(+) antiporter 15; Provisional 100.0
KOG1650769 consensus Predicted K+/H+-antiporter [Inorganic io 100.0
PRK03562621 glutathione-regulated potassium-efflux system prot 100.0
PRK10669558 putative cation:proton antiport protein; Provision 100.0
PRK03659601 glutathione-regulated potassium-efflux system prot 100.0
COG0475397 KefB Kef-type K+ transport systems, membrane compo 100.0
PRK05326562 potassium/proton antiporter; Reviewed 100.0
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 100.0
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 100.0
COG4651408 RosB Kef-type K+ transport system, predicted NAD-b 99.97
TIGR00844810 c_cpa1 na(+)/h(+) antiporter. This model is specif 99.92
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 99.91
PRK11175305 universal stress protein UspE; Provisional 99.9
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 99.84
TIGR00840559 b_cpa1 sodium/hydrogen exchanger 3. This model is 99.83
COG3263574 NhaP-type Na+/H+ and K+/H+ antiporters with a uniq 99.79
PRK14853423 nhaA pH-dependent sodium/proton antiporter; Provis 99.76
KOG4505467 consensus Na+/H+ antiporter [Inorganic ion transpo 99.59
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.54
TIGR00773373 NhaA Na+/H+ antiporter NhaA. These proteins are me 99.52
PRK15005144 universal stress protein F; Provisional 99.46
PRK15456142 universal stress protein UspG; Provisional 99.43
PRK09982142 universal stress protein UspD; Provisional 99.4
PRK15118144 universal stress global response regulator UspA; P 99.39
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 99.34
KOG1965575 consensus Sodium/hydrogen exchanger protein [Inorg 99.26
cd01987124 USP_OKCHK USP domain is located between the N-term 99.19
PRK10116142 universal stress protein UspC; Provisional 99.18
PF00582140 Usp: Universal stress protein family; InterPro: IP 99.14
cd01989146 STK_N The N-terminal domain of Eukaryotic Serine T 99.14
PRK14856438 nhaA pH-dependent sodium/proton antiporter; Provis 99.11
PRK15005144 universal stress protein F; Provisional 99.08
PRK09560389 nhaA pH-dependent sodium/proton antiporter; Review 99.06
PRK09982142 universal stress protein UspD; Provisional 99.05
PRK11175305 universal stress protein UspE; Provisional 99.03
PRK09561388 nhaA pH-dependent sodium/proton antiporter; Review 99.01
PRK14855423 nhaA pH-dependent sodium/proton antiporter; Provis 99.01
PF00582140 Usp: Universal stress protein family; InterPro: IP 99.01
cd01988132 Na_H_Antiporter_C The C-terminal domain of a subfa 99.0
PRK15456142 universal stress protein UspG; Provisional 98.98
PRK14854383 nhaA pH-dependent sodium/proton antiporter; Provis 98.98
cd01987124 USP_OKCHK USP domain is located between the N-term 98.95
PRK15118144 universal stress global response regulator UspA; P 98.93
cd00293130 USP_Like Usp: Universal stress protein family. The 98.91
PF06965378 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IP 98.85
PRK10116142 universal stress protein UspC; Provisional 98.84
COG0589154 UspA Universal stress protein UspA and related nuc 98.61
cd00293130 USP_Like Usp: Universal stress protein family. The 98.6
COG3004390 NhaA Na+/H+ antiporter [Inorganic ion transport an 98.59
KOG1966670 consensus Sodium/hydrogen exchanger protein [Inorg 98.17
COG0589154 UspA Universal stress protein UspA and related nuc 98.09
PRK12652357 putative monovalent cation/H+ antiporter subunit E 98.02
PRK12652 357 putative monovalent cation/H+ antiporter subunit E 97.94
PRK12460312 2-keto-3-deoxygluconate permease; Provisional 97.89
PF03812314 KdgT: 2-keto-3-deoxygluconate permease; InterPro: 97.3
COG0385319 Predicted Na+-dependent transporter [General funct 97.04
PF05684378 DUF819: Protein of unknown function (DUF819); Inte 96.84
PRK10490 895 sensor protein KdpD; Provisional 96.8
TIGR00793314 kdgT 2-keto-3-deoxygluconate transporter. This fam 96.71
TIGR00932273 2a37 transporter, monovalent cation:proton antipor 96.3
PRK03562 621 glutathione-regulated potassium-efflux system prot 96.3
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 96.29
PRK10490 895 sensor protein KdpD; Provisional 95.99
COG0475397 KefB Kef-type K+ transport systems, membrane compo 95.86
PRK10669558 putative cation:proton antiport protein; Provision 95.82
PRK03659601 glutathione-regulated potassium-efflux system prot 95.81
COG0798342 ACR3 Arsenite efflux pump ACR3 and related permeas 95.6
COG2855334 Predicted membrane protein [Function unknown] 95.5
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 95.43
PF13593313 DUF4137: SBF-like CPA transporter family (DUF4137) 95.41
PF01758187 SBF: Sodium Bile acid symporter family; InterPro: 95.24
TIGR00783347 ccs citrate carrier protein, CCS family. These pro 95.22
PRK05326562 potassium/proton antiporter; Reviewed 95.22
PF05145318 AmoA: Putative ammonia monooxygenase; InterPro: IP 95.15
PRK05274326 2-keto-3-deoxygluconate permease; Provisional 94.86
PF03390414 2HCT: 2-hydroxycarboxylate transporter family; Int 94.82
TIGR00841286 bass bile acid transporter. Functionally character 94.82
TIGR00698335 conserved hypothetical integral membrane protein. 94.78
TIGR00832328 acr3 arsenical-resistance protein. The first prote 94.63
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 94.45
COG2205 890 KdpD Osmosensitive K+ channel histidine kinase [Si 94.33
COG3180352 AbrB Putative ammonia monooxygenase [General funct 94.26
cd0198486 AANH_like Adenine nucleotide alpha hydrolases supe 94.08
TIGR00698335 conserved hypothetical integral membrane protein. 94.04
TIGR00844 810 c_cpa1 na(+)/h(+) antiporter. This model is specif 93.99
COG0786404 GltS Na+/glutamate symporter [Amino acid transport 93.68
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 93.54
PLN03159 832 cation/H(+) antiporter 15; Provisional 93.37
TIGR00831525 a_cpa1 Na+/H+ antiporter, bacterial form. This mod 93.0
TIGR03136399 malonate_biotin Na+-transporting malonate decarbox 92.42
PF03956191 DUF340: Membrane protein of unknown function (DUF3 92.05
COG1346230 LrgB Putative effector of murein hydrolase [Cell e 91.74
PF03977360 OAD_beta: Na+-transporting oxaloacetate decarboxyl 91.45
TIGR03082156 Gneg_AbrB_dup membrane protein AbrB duplication. T 91.29
PF03601305 Cons_hypoth698: Conserved hypothetical protein 698 90.75
PF06826169 Asp-Al_Ex: Predicted Permease Membrane Region; Int 90.1
PF03616368 Glt_symporter: Sodium/glutamate symporter; InterPr 89.44
TIGR00930953 2a30 K-Cl cotransporter. 89.12
TIGR02432189 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-t 87.55
PRK04288232 antiholin-like protein LrgB; Provisional 86.88
PF01171182 ATP_bind_3: PP-loop family; InterPro: IPR011063 Th 86.23
PRK15475433 oxaloacetate decarboxylase subunit beta; Provision 86.06
PRK15477433 oxaloacetate decarboxylase subunit beta; Provision 85.93
PRK15476433 oxaloacetate decarboxylase subunit beta; Provision 85.93
COG0025429 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorg 85.46
TIGR01625154 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplicati 85.06
cd01992185 PP-ATPase N-terminal domain of predicted ATPase of 85.06
PF03956191 DUF340: Membrane protein of unknown function (DUF3 83.89
COG1883375 OadB Na+-transporting methylmalonyl-CoA/oxaloaceta 83.44
PF00999380 Na_H_Exchanger: Sodium/hydrogen exchanger family; 83.21
COG1646240 Predicted phosphate-binding enzymes, TIM-barrel fo 83.03
PRK05253 301 sulfate adenylyltransferase subunit 2; Provisional 81.12
COG3493438 CitS Na+/citrate symporter [Energy production and 80.52
TIGR00659226 conserved hypothetical protein TIGR00659. Members 80.5
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.8e-136  Score=1199.82  Aligned_cols=688  Identities=34%  Similarity=0.608  Sum_probs=621.8

Q ss_pred             CEEEEEECccccCCCccccccccCccchHHHHHHHHHHHHHHHHHHhhccChhHHHhcchhHHHHHHHHHHHHHHHHHHH
Q 046591            1 MLAGIALGPSFLGHNEKVSKKIFTPKTQLVISVFESFGLIYITFVTSVRADLSIMTKSGRLGIVIGIGSYLLPLIVTSLS   80 (711)
Q Consensus         1 ilaGiiLGPs~Lg~~~~~~~~lf~~~~~~~l~~la~~Gl~~~lF~~Gle~d~~~l~~~~~~~~~i~~~~~~~p~~~g~~~   80 (711)
                      |++|++|||+++|+++.+.+.+||.++.+.+++++++|++++||++|+|+|++.+||++|+++.+|+.++++|+++|+++
T Consensus        74 IlaGIlLGPs~lg~i~~~~~~~fp~~~~~~l~~la~lGlillmFliGLE~Dl~~lr~~~k~a~~ia~~~~ilpf~lg~~~  153 (832)
T PLN03159         74 ILGGVILGPSVLGQSEVFANTIFPLRSVMVLETMANLGLLYFLFLVGVEMDISVIRRTGKKALAIAIAGMALPFCIGLAF  153 (832)
T ss_pred             HHHHHhcCHhhhCcChhhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence            57999999999999988889999988888999999999999999999999999999999999999999999999999988


Q ss_pred             HHHhhccCCCCCchhhHHHHHHHHhhhccHHHHHHHHHhhccccChhHHHHHHHHHHHhHHHHHHHHHHHHHhhccccCc
Q 046591           81 TVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGI  160 (711)
Q Consensus        81 ~~~l~~~~~~~~~~~~~~~~l~~~~s~Ts~~vv~~iL~el~l~~s~~G~lals~a~i~D~~~~~ll~~~~~~~~~~~~~~  160 (711)
                      ++++............+ +++|+++|.||+|+++++|+|+|+++++.||+++++++++|+++|++++++.++...+.   
T Consensus       154 ~~~l~~~~~~~~~~~~~-l~~g~alS~Ts~pVv~riL~Elkll~s~~GrlaLsaavv~Dl~~~ilLav~~~l~~~~~---  229 (832)
T PLN03159        154 SFIFHQVSRNVHQGTFI-LFLGVALSVTAFPVLARILAEIKLINTELGRIAMSAALVNDMCAWILLALAIALAENDS---  229 (832)
T ss_pred             HHHHhhcccccchhHHH-HHHHHHHHHhhHHHHHHHHHHcCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence            88774321111113456 89999999999999999999999999999999999999999999999998877654432   


Q ss_pred             chhhH-HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcccchHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHhhcCCC
Q 046591          161 GSINL-LNLMSFMLIVIFIVFIIRPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLI  239 (711)
Q Consensus       161 ~~~~~-~~~~~~i~~~~~~~~v~r~~~~~~~~~~~~~~~~~~~~~~~il~~~l~~~~~~~~~g~~~~lGaf~~Gl~l~~~  239 (711)
                      +...+ |.++..++|++++++++||++.|+.|+++++++.++.++.++++++++++++++.+|+|+++|||++|+++|+ 
T Consensus       230 ~~~~~l~~~l~~~~f~~~~~~v~r~~~~~~~r~~~~~~~~~e~~v~~il~~vl~~a~lae~~Gl~~ilGAFlaGl~lp~-  308 (832)
T PLN03159        230 TSLASLWVLLSSVAFVLFCFYVVRPGIWWIIRRTPEGETFSEFYICLILTGVMISGFITDAIGTHSVFGAFVFGLVIPN-  308 (832)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCCCCcccchhHHHHHHHHHHHHHHHHhCccHHHHHHHHhhccCC-
Confidence            12334 6777777888889999999999999999998888899999999999999999999999999999999999998 


Q ss_pred             CCchhHHHHHHHHHHHHhhHHHHHHHhcccceec-ccCchhhHHHHHHHHHHHHhHHHHHHHHHhhcCCChhHHHHHHHH
Q 046591          240 PPMGSLLTDKMEAFVWSVFLPCFLINSGKGVNLF-STTLTGFLIVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLL  318 (711)
Q Consensus       240 ~~~~~~l~~~l~~~~~~~~~PlFF~~~G~~~d~~-l~~~~~~~~~~~ii~~~~~~K~~~~~l~~~~~~~~~~~a~~lgl~  318 (711)
                      +|+++++.+|++++++++|+|+||+++|+++|+. +.+...|..+++++++++++|+++++++++++|+|++|++.+|++
T Consensus       309 ~~~~~~l~ekle~~~~~lflPlFFv~vGl~idl~~l~~~~~~~~~~~liv~a~~gK~~g~~l~a~~~g~~~~eal~lG~l  388 (832)
T PLN03159        309 GPLGVTLIEKLEDFVSGLLLPLFFAISGLKTNVTKIQGPATWGLLVLVIIMASAGKIMGTIIIAFFYTMPFREGITLGFL  388 (832)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHHHHhhheeeHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence            5889999999999999999999999999999999 876545666777788899999999999999999999999999999


Q ss_pred             hhcchhHHHHHhhhccccCCCCchhhHHHHHHHHHHHHhHHHHHHHhhccchhhhhhccccccccCCcccceeEEEEecc
Q 046591          319 LNCRGIYDIQIFSRSNRRKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAELRILACIYEE  398 (711)
Q Consensus       319 l~~kG~~~l~~~~~~~~~~~i~~~~f~~lvl~~ll~t~i~~pl~~~~~~p~~~~~~~~~r~i~~~~~~~e~rILv~i~~~  398 (711)
                      ||+||+++++++++|++.|+++++.|++++++++++|.+.+|+++++|||+|||..|++|++|+.++++|+|||+|+|++
T Consensus       389 m~~kG~~~Lii~~ig~~~gvi~~~~f~~lVl~avl~T~i~~Plv~~ly~p~rk~~~~~~r~i~~~~~~~elriL~cv~~~  468 (832)
T PLN03159        389 MNTKGLVEMIVLNVGRDQEVLDDESFAVMVLVAVAMTALITPVVTVVYRPARRLVGYKRRTIQRSKHDAELRMLVCVHTP  468 (832)
T ss_pred             HhcccHHHHHHHHHHHhcCccCchhhhHHHHHHHHHHHHHHHHHHHHhCHHhhhccccccccccCCCCCceeEEEEeccC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CChHHHHHHHHhcCC-CCCCcEEEEEEeecccCCCchhhhccccCCCCCC---CCCCchHHHHHHHHHHHHhcCCceEEE
Q 046591          399 NNVATIINVLGASIF-PQRPMELHVLNLEEYVGHSLPLVISHRLDKMPSS---SKPTKIDFILNAFRQFEQQSSGSLSLQ  474 (711)
Q Consensus       399 ~~~~~~l~la~~~~~-~~~~~~v~~lhlvel~~~~~~~~~~~~~~~~~~~---~~~~~~~~i~~~f~~~~~~~~~~v~v~  474 (711)
                      +|+++++++++.+++ +++|.++|++|++|+++|++|.+++|+.+++..+   +...++|++.++|+.|++++ ++|+++
T Consensus       469 ~~v~~li~Lle~s~~t~~sp~~vy~lhLveL~~r~~~~l~~h~~~~~~~~~~~~~~~~~~~i~~af~~~~~~~-~~v~v~  547 (832)
T PLN03159        469 RNVPTIINLLEASHPTKRSPICIYVLHLVELTGRASAMLIVHNTRKSGRPALNRTQAQSDHIINAFENYEQHA-GCVSVQ  547 (832)
T ss_pred             CcHHHHHHHHHhcCCCCCCCceEEEEEEEeecCCCccceeeeecccccccccccccccccHHHHHHHHHHhhc-CceEEE
Confidence            999999999999988 8999999999999999999999999986533111   12345899999999999754 579999


Q ss_pred             EEEEEccCCChhHHHHHhhhhcCccEEEeccccC----C-----chhHHHHHHHHhhcCCcceEEEeccCCccccccccc
Q 046591          475 CFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKT----N-----SYVIKKITKKVLKMAPCSVGILFDRREFMNSRHIFT  545 (711)
Q Consensus       475 ~~~~vs~~~~~~~~I~~~A~e~~~dlIimg~h~~----~-----~~~~gs~~~~Vl~~ApC~V~ilvdrg~~~~~~~~~~  545 (711)
                      ++|++||+++||+|||++|+|+++|+||+||||.    +     +..+|.+|+||+++|||||||+||||... ..+...
T Consensus       548 ~~t~vs~~~~mh~dIc~~A~d~~~slIilpfhk~~~~dg~~~~~~~~~r~~n~~VL~~ApCsVgIlVDRg~~~-~~~~~~  626 (832)
T PLN03159        548 PLTAISPYSTMHEDVCNLAEDKRVSLIIIPFHKQQTVDGGMEATNPAFRGVNQNVLANAPCSVGILVDRGLSG-ATRLAS  626 (832)
T ss_pred             EEEEEeCcccHHHHHHHHHHhcCCCEEEECCCCccCCCCCccccCchHHHHHHHHHccCCCCEEEEEeCCCCc-cccccc
Confidence            9999999999999999999999999999999981    1     45799999999999999999999999652 211122


Q ss_pred             cCcceeEEEeccCCcchHHHHHHHHHHhcCCCeEEEEEEeeecCCCCc--------------------chhhhhhHHHHH
Q 046591          546 HRSAINVCVIFLGGPDDREALAYGARMTGDQNAMLTIIRFFAVNHATK--------------------DLIEEKNDLNLI  605 (711)
Q Consensus       546 ~~~~~~I~v~f~gg~ddreAl~~a~rma~~~~~~ltvl~v~~~~~~~~--------------------~~~~~~~d~~~l  605 (711)
                      ....+||+++|+||+||||||+||+|||+|+++++||+||++++...+                    ++.|+++||+++
T Consensus       627 ~~~~~~v~~~F~GG~DDREALa~a~rma~~p~v~lTVirf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~D~~~~  706 (832)
T PLN03159        627 NQVSHHVAVLFFGGPDDREALAYAWRMSEHPGITLTVMRFIPGEDAAPTASQPASSPSDPRIPTVETDGKKERQLDEEYI  706 (832)
T ss_pred             cccceeEEEEecCCcchHHHHHHHHHHhcCCCeEEEEEEEEcccccccccccccccccccccccccccchhHHHHHHHHH
Confidence            334679999999999999999999999999999999999997643211                    356788999999


Q ss_pred             HHHHhccCCCCCeEEEEEeecCchhHHHHHHhhcCCccEEEEcccCCCCCccccCCCCCCCCCccchhhhHhhcCCCCCc
Q 046591          606 SGLRMSTMDSKNVRYIKHSVKEGSETFHVINSIGNDFELILTGRTHDYCSPVLSGLVEWSESQELGVVGDILASSDFKSN  685 (711)
Q Consensus       606 ~~~~~~~~~~~~v~y~e~~v~~g~~i~~~~~~~~~~~DLiivG~~~~~~~~~~~gl~~w~e~~eLG~igd~las~d~~~~  685 (711)
                      +||+.++..++++.|.|+.|+||+|+++.+|+++++|||++|||+|+.+|++|+||+||+||||||+|||+|||+||+++
T Consensus       707 ~ef~~~~~~~~~v~y~E~~V~~~~e~~~~l~~~~~~ydL~iVGr~~~~~~~~~~gL~~w~e~pELG~iGD~LaS~d~~~~  786 (832)
T PLN03159        707 NEFRARNAGNESIVYTEKVVSNGEETVAAIRSMDSAHDLFIVGRGQGMISPLTAGLTDWSECPELGAIGDLLASSDFAAT  786 (832)
T ss_pred             HHHHHhcCCCCceEEEEEecCCHHHHHHHHHHhhccCcEEEEecCCCCCcchhccccccccCCccchhhhHHhcCCCCCc
Confidence            99999987778999999999999999999999988999999999998889999999999999999999999999999999


Q ss_pred             ccEEEEeeec
Q 046591          686 ASVMVMQQQA  695 (711)
Q Consensus       686 ~svLvvqq~~  695 (711)
                      +||||||||+
T Consensus       787 ~SVLVvQQ~~  796 (832)
T PLN03159        787 VSVLVVQQYV  796 (832)
T ss_pred             eeEEEEEeec
Confidence            9999999997

>KOG1650 consensus Predicted K+/H+-antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>COG4651 RosB Kef-type K+ transport system, predicted NAD-binding component [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00840 b_cpa1 sodium/hydrogen exchanger 3 Back     alignment and domain information
>COG3263 NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK14853 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>KOG4505 consensus Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>TIGR00773 NhaA Na+/H+ antiporter NhaA Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>KOG1965 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases Back     alignment and domain information
>PRK14856 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PRK15005 universal stress protein F; Provisional Back     alignment and domain information
>PRK09560 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK09982 universal stress protein UspD; Provisional Back     alignment and domain information
>PRK11175 universal stress protein UspE; Provisional Back     alignment and domain information
>PRK09561 nhaA pH-dependent sodium/proton antiporter; Reviewed Back     alignment and domain information
>PRK14855 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents Back     alignment and domain information
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea Back     alignment and domain information
>PRK15456 universal stress protein UspG; Provisional Back     alignment and domain information
>PRK14854 nhaA pH-dependent sodium/proton antiporter; Provisional Back     alignment and domain information
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family Back     alignment and domain information
>PRK15118 universal stress global response regulator UspA; Provisional Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>PF06965 Na_H_antiport_1: Na+/H+ antiporter 1; InterPro: IPR004670 NhaA is a sodium ion/proton antiporter that uses the proton electrochemical gradient to expel sodium ions from the cytoplasm and functions primarily in the adaptation to high salinity at alkaline pH Back     alignment and domain information
>PRK10116 universal stress protein UspC; Provisional Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>cd00293 USP_Like Usp: Universal stress protein family Back     alignment and domain information
>COG3004 NhaA Na+/H+ antiporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG1966 consensus Sodium/hydrogen exchanger protein [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms] Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed Back     alignment and domain information
>PRK12460 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PF03812 KdgT: 2-keto-3-deoxygluconate permease; InterPro: IPR004684 This family includes the characterised 2-Keto-3-Deoxygluconate transporters from Bacillus subtilis and Erwinia chrysanthemi Back     alignment and domain information
>COG0385 Predicted Na+-dependent transporter [General function prediction only] Back     alignment and domain information
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>TIGR00793 kdgT 2-keto-3-deoxygluconate transporter Back     alignment and domain information
>TIGR00932 2a37 transporter, monovalent cation:proton antiporter-2 (CPA2) family Back     alignment and domain information
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PRK10490 sensor protein KdpD; Provisional Back     alignment and domain information
>COG0475 KefB Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK10669 putative cation:proton antiport protein; Provisional Back     alignment and domain information
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional Back     alignment and domain information
>COG0798 ACR3 Arsenite efflux pump ACR3 and related permeases [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG2855 Predicted membrane protein [Function unknown] Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>PF13593 DUF4137: SBF-like CPA transporter family (DUF4137) Back     alignment and domain information
>PF01758 SBF: Sodium Bile acid symporter family; InterPro: IPR002657 This family of proteins are found both in prokaryotes and eukaryotes Back     alignment and domain information
>TIGR00783 ccs citrate carrier protein, CCS family Back     alignment and domain information
>PRK05326 potassium/proton antiporter; Reviewed Back     alignment and domain information
>PF05145 AmoA: Putative ammonia monooxygenase; InterPro: IPR007820 This family contains sequences annotated as ammonia monooxygenase Back     alignment and domain information
>PRK05274 2-keto-3-deoxygluconate permease; Provisional Back     alignment and domain information
>PF03390 2HCT: 2-hydroxycarboxylate transporter family; InterPro: IPR004679 The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom Back     alignment and domain information
>TIGR00841 bass bile acid transporter Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>TIGR00832 acr3 arsenical-resistance protein Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms] Back     alignment and domain information
>COG3180 AbrB Putative ammonia monooxygenase [General function prediction only] Back     alignment and domain information
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF) Back     alignment and domain information
>TIGR00698 conserved hypothetical integral membrane protein Back     alignment and domain information
>TIGR00844 c_cpa1 na(+)/h(+) antiporter Back     alignment and domain information
>COG0786 GltS Na+/glutamate symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>PLN03159 cation/H(+) antiporter 15; Provisional Back     alignment and domain information
>TIGR00831 a_cpa1 Na+/H+ antiporter, bacterial form Back     alignment and domain information
>TIGR03136 malonate_biotin Na+-transporting malonate decarboxylase, carboxybiotin decarboxylase subunit Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03977 OAD_beta: Na+-transporting oxaloacetate decarboxylase beta subunit; InterPro: IPR005661 Members of this family are integral membrane proteins Back     alignment and domain information
>TIGR03082 Gneg_AbrB_dup membrane protein AbrB duplication Back     alignment and domain information
>PF03601 Cons_hypoth698: Conserved hypothetical protein 698; InterPro: IPR018383 This entry represents a family of uncharacterised multi-pass membrane proteins Back     alignment and domain information
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters Back     alignment and domain information
>PF03616 Glt_symporter: Sodium/glutamate symporter; InterPro: IPR004445 This is a family of sodium/glutamate symporters (glutamate permeases), which catalyse the sodium-dependent uptake of extracellular glutamate Back     alignment and domain information
>TIGR00930 2a30 K-Cl cotransporter Back     alignment and domain information
>TIGR02432 lysidine_TilS_N tRNA(Ile)-lysidine synthetase, N-terminal domain Back     alignment and domain information
>PRK04288 antiholin-like protein LrgB; Provisional Back     alignment and domain information
>PF01171 ATP_bind_3: PP-loop family; InterPro: IPR011063 This entry represents the PP-loop motif superfamily [,] Back     alignment and domain information
>PRK15475 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>PRK15477 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>PRK15476 oxaloacetate decarboxylase subunit beta; Provisional Back     alignment and domain information
>COG0025 NhaP NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR01625 YidE_YbjL_dupl AspT/YidE/YbjL antiporter duplication domain Back     alignment and domain information
>cd01992 PP-ATPase N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning] Back     alignment and domain information
>PF03956 DUF340: Membrane protein of unknown function (DUF340); InterPro: IPR005642 Members of this family contain a conserved core of four predicted transmembrane segments Back     alignment and domain information
>COG1883 OadB Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit [Energy production and conversion] Back     alignment and domain information
>PF00999 Na_H_Exchanger: Sodium/hydrogen exchanger family; InterPro: IPR006153 Sodium proton exchangers (NHEs) constitute a large family of integral membrane protein transporters that are responsible for the counter-transport of protons and sodium ions across lipid bilayers [, ] Back     alignment and domain information
>COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only] Back     alignment and domain information
>PRK05253 sulfate adenylyltransferase subunit 2; Provisional Back     alignment and domain information
>COG3493 CitS Na+/citrate symporter [Energy production and conversion] Back     alignment and domain information
>TIGR00659 conserved hypothetical protein TIGR00659 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query711
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-05
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 59.1 bits (142), Expect = 4e-09
 Identities = 83/566 (14%), Positives = 148/566 (26%), Gaps = 208/566 (36%)

Query: 26  KTQLVISVFES--------FGLIYITF--VTSVRADLSIMTKSGRLGIVIGIGSYLLPLI 75
           KT + + V  S        F + ++      S    L ++ K                  
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK------------------ 204

Query: 76  VTSLSTVIVNQFDPLDGELGESVQMVTGLESTISFYGILEILTDMKLLNSELGRLALSSS 135
                  ++ Q DP      +                   I   +  + +EL RL  S  
Sbjct: 205 -------LLYQIDPNWTSRSDHSS---------------NIKLRIHSIQAELRRLLKSKP 242

Query: 136 LTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFIIRPVMVWMMRQTPE 195
             N LL         VL ++Q A     N  NL   +L+        R   V        
Sbjct: 243 YENCLL---------VLLNVQNAKA--WNAFNLSCKILL------TTRFKQVTDFLSAAT 285

Query: 196 GKRLKNEHVIALNIMVVCSYFVSESMGLIGFW---------------GPIILGVITPLIP 240
              +  +H          +    E   L+  +                P  L +I   I 
Sbjct: 286 TTHISLDHHSM-------TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIR 338

Query: 241 PMGSL-----------LTDKMEAFVWS--------VFLPCFLINSGKGVNLFSTTLTGFL 281
              +            LT  +E+ +          +F    +       ++ +  L+   
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP--PSAHIPTILLS--- 393

Query: 282 IVEFLIWVATTVKLFAIIIPSLYYKMPFMDALSLGLLLNCR------GIYDIQIFSRSNR 335
               LIW                  M  ++ L    L+  +       I  I +  +   
Sbjct: 394 ----LIWFDVIK----------SDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKL 439

Query: 336 -------RKMLSDESYGVMVMTAMLKSAIALPLLRVFYDTSRRYVAYKRRTIQHTRHDAE 388
                  R ++  + Y +   T      I   L + FY     ++ +  + I+H      
Sbjct: 440 ENEYALHRSIV--DHYNIPK-TFDSDDLIPPYLDQYFYS----HIGHHLKNIEHPERMTL 492

Query: 389 LR------------ILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLV 436
            R            I       N   +I+N L                L+ Y  +     
Sbjct: 493 FRMVFLDFRFLEQKIRHDSTAWNASGSILNTL--------------QQLKFYKPY----- 533

Query: 437 ISHRLDKMPSSSKPTKIDFILNAFRQFEQQSSGSLSLQCFTATAPYDSMHEDICSMTFEK 496
           I    D  P   +      ++NA   F  +   +L                 ICS    K
Sbjct: 534 IC---DNDPKYER------LVNAILDFLPKIEENL-----------------ICS----K 563

Query: 497 CTSLVIIPFQKTNSYVIKKITKKVLK 522
            T L+ I     +  + ++  K+V +
Sbjct: 564 YTDLLRIALMAEDEAIFEEAHKQVQR 589
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query711
1zcd_A388 Na(+)/H(+) antiporter 1; membrane protein; 3.45A { 99.91
3mt0_A290 Uncharacterized protein PA1789; structural genomic 99.9
3olq_A319 Universal stress protein E; structural genomics, P 99.88
3cis_A309 Uncharacterized protein; alpha/beta hydrolase, ATP 99.87
3loq_A294 Universal stress protein; structural genomics, PSI 99.87
3ab8_A268 Putative uncharacterized protein TTHA0350; tandem- 99.84
3fdx_A143 Putative filament protein / universal stress PROT; 99.41
3s3t_A146 Nucleotide-binding protein, universal stress PROT 99.33
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 99.32
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 99.31
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 99.31
3dlo_A155 Universal stress protein; unknown function, struct 99.31
2z08_A137 Universal stress protein family; uncharacterized c 99.28
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 99.28
3tnj_A150 Universal stress protein (USP); structural genomic 99.27
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 99.23
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 99.23
3fg9_A156 Protein of universal stress protein USPA family; A 99.23
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 99.21
3s3t_A146 Nucleotide-binding protein, universal stress PROT 99.19
1mjh_A162 Protein (ATP-binding domain of protein MJ0577); hy 99.12
3hgm_A147 Universal stress protein TEAD; rossman fold, signa 99.11
3dlo_A155 Universal stress protein; unknown function, struct 99.11
3fdx_A143 Putative filament protein / universal stress PROT; 99.08
2z08_A137 Universal stress protein family; uncharacterized c 99.08
3tnj_A150 Universal stress protein (USP); structural genomic 99.08
3idf_A138 USP-like protein; universal, stress, PSI, MCSG, st 99.07
1q77_A138 Hypothetical protein AQ_178; structural genomics, 99.07
2dum_A170 Hypothetical protein PH0823; conserved hypothetica 99.07
1tq8_A163 Hypothetical protein RV1636; MTCY01B2.28, structur 99.05
3fg9_A156 Protein of universal stress protein USPA family; A 99.0
3mt0_A290 Uncharacterized protein PA1789; structural genomic 98.95
3olq_A319 Universal stress protein E; structural genomics, P 98.9
1jmv_A141 USPA, universal stress protein A; chaperone; 1.85A 98.9
2gm3_A175 Unknown protein; AT3G01520, putative ethylene-resp 98.89
3loq_A294 Universal stress protein; structural genomics, PSI 98.83
1q77_A138 Hypothetical protein AQ_178; structural genomics, 98.79
3ab8_A 268 Putative uncharacterized protein TTHA0350; tandem- 98.71
3cis_A 309 Uncharacterized protein; alpha/beta hydrolase, ATP 98.66
3zux_A332 Transporter, ASBTNM; transport protein, membrane p 97.35
3g40_A294 Na-K-CL cotransporter; alpha/beta fold 10-stranded 96.08
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A Back     alignment and structure
Probab=99.91  E-value=1.2e-24  Score=231.66  Aligned_cols=301  Identities=13%  Similarity=0.110  Sum_probs=216.8

Q ss_pred             HHHHHHHHHHHHHHHHHhhccChhHH----Hhcch--hHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCchhhHHHHHHH
Q 046591           30 VISVFESFGLIYITFVTSVRADLSIM----TKSGR--LGIVIGIGSYLLPLIVTSLSTVIVNQFDPLDGELGESVQMVTG  103 (711)
Q Consensus        30 ~l~~la~~Gl~~~lF~~Gle~d~~~l----~~~~~--~~~~i~~~~~~~p~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~  103 (711)
                      ...-+.+-.+.++||.+|+|+|.+.+    ++.+|  .....++.|+++|++++.    .+. ..     ...+ .....
T Consensus        59 l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy~----~~~-~~-----~~~~-~~gw~  127 (388)
T 1zcd_A           59 MLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYL----AFN-YA-----DPIT-REGWA  127 (388)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHHG----GGC-CS-----STTH-HHHTS
T ss_pred             HHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHHH----HHh-cC-----Chhh-hhhhH
Confidence            34556677788999999999999877    55444  378889999999998732    222 11     1234 55566


Q ss_pred             HhhhccHHHHHHHHHhhccc-cChhHHHHHHHHHHHhHHHHHHHHHHHHHhhccccCcchhhHHHHHHHHHHHHHHHHHH
Q 046591          104 LESTISFYGILEILTDMKLL-NSELGRLALSSSLTNTLLNMTLGTVLVVLSDIQEAGIGSINLLNLMSFMLIVIFIVFII  182 (711)
Q Consensus       104 ~~s~Ts~~vv~~iL~el~l~-~s~~G~lals~a~i~D~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~  182 (711)
                      +.+.|+.+....++..++.. .+..++.+++.|++||+.+|+++++++.   ++ .  +  ..+... .+++.+..    
T Consensus       128 ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt---~~-~--~--~~~l~~-~~~~~~~~----  194 (388)
T 1zcd_A          128 IPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT---ND-L--S--MASLGV-AAVAIAVL----  194 (388)
T ss_dssp             SSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC---CC-C--C--HHHHHH-HHHHHHHH----
T ss_pred             HHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc---CC-c--c--HHHHHH-HHHHHHHH----
Confidence            67778888888999987764 4566799999999999999999998853   11 1  1  112211 11111111    


Q ss_pred             HHHHHHHHhhcCCCCcccchHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHhhcCCCC----CchhHHHHHHHHHHHHhh
Q 046591          183 RPVMVWMMRQTPEGKRLKNEHVIALNIMVVCSYFVSESMGLIGFWGPIILGVITPLIP----PMGSLLTDKMEAFVWSVF  258 (711)
Q Consensus       183 r~~~~~~~~~~~~~~~~~~~~~~~il~~~l~~~~~~~~~g~~~~lGaf~~Gl~l~~~~----~~~~~l~~~l~~~~~~~~  258 (711)
                           +..+|..    ++....+.++.  +++.+.++..|+|+++|+|++|+++|..+    +..+++++++++++..++
T Consensus       195 -----~~l~r~~----v~~~~~y~~lg--l~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~~le~~l~p~v~~~i  263 (388)
T 1zcd_A          195 -----AVLNLCG----ARRTGVYILVG--VVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLI  263 (388)
T ss_dssp             -----HHHHHTT----CCCTHHHHHHH--HHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHHHHHHHHHHHHHHTH
T ss_pred             -----HHHHHhc----chhHHHHHHHH--HHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHHHHHHHHHHHHHHHH
Confidence                 2223321    12233344332  24456679999999999999999999853    346789999999999999


Q ss_pred             HHHH-HHHhcccceec-ccCchhhHHHHHHHHHHHHhHHHHHHHHHh----hc------CCChhHHHHHHHHhhcchhHH
Q 046591          259 LPCF-LINSGKGVNLF-STTLTGFLIVEFLIWVATTVKLFAIIIPSL----YY------KMPFMDALSLGLLLNCRGIYD  326 (711)
Q Consensus       259 ~PlF-F~~~G~~~d~~-l~~~~~~~~~~~ii~~~~~~K~~~~~l~~~----~~------~~~~~~a~~lgl~l~~kG~~~  326 (711)
                      +|+| |+..|+++|.. +..... .....+++..+++|++|++..++    +.      |++|+|...+|++++.+++++
T Consensus       264 lPlFaFanaGv~l~~~~~~~l~~-~~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~~~~vg~L~gigftms  342 (388)
T 1zcd_A          264 LPLFAFANAGVSLQGVTLDGLTS-ILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQIMVVGILCGIGFTMS  342 (388)
T ss_dssp             HHHHHHHHCCCCCSSSCCCTHHH-HSSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGGGTTHHHHTTCCHHHH
T ss_pred             HHHHHHHhcCeeecccchhhccC-hHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHHHHHHHHHhccchHHH
Confidence            9999 99999999985 432211 11234455568999999555444    44      999999999999999999999


Q ss_pred             HHHhhhccccCC--CCchhhHHHHHHHHHHHHhHHHHHHHhh
Q 046591          327 IQIFSRSNRRKM--LSDESYGVMVMTAMLKSAIALPLLRVFY  366 (711)
Q Consensus       327 l~~~~~~~~~~~--i~~~~f~~lvl~~ll~t~i~~pl~~~~~  366 (711)
                      +++++.+++.+.  +.++.+..+++++++++.+++.++++.+
T Consensus       343 L~Ia~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~~~~  384 (388)
T 1zcd_A          343 IFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRL  384 (388)
T ss_dssp             HHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGTTTC
T ss_pred             HHHHHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            999999998876  3567788999999998888888777654
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0 Back     alignment and structure
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4 Back     alignment and structure
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0 Back     alignment and structure
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A* Back     alignment and structure
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A* Back     alignment and structure
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A Back     alignment and structure
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A* Back     alignment and structure
>3idf_A USP-like protein; universal, stress, PSI, MCSG, structural genomics, midwest center for structural genomics structure initiative; 2.00A {Wolinella succinogenes} Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii} Back     alignment and structure
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4 Back     alignment and structure
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum} Back     alignment and structure
>3mt0_A Uncharacterized protein PA1789; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.58A {Pseudomonas aeruginosa} Back     alignment and structure
>3olq_A Universal stress protein E; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: UNL; 1.82A {Proteus mirabilis} Back     alignment and structure
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4 Back     alignment and structure
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4 Back     alignment and structure
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus} Back     alignment and structure
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4 Back     alignment and structure
>3ab8_A Putative uncharacterized protein TTHA0350; tandem-type universal stress protein, unknown function; HET: ATP; 1.70A {Thermus thermophilus} PDB: 3ab7_A* Back     alignment and structure
>3cis_A Uncharacterized protein; alpha/beta hydrolase, ATP, universal stress protein, unknown function; HET: ATP; 2.90A {Mycobacterium tuberculosis} PDB: 2jax_A* Back     alignment and structure
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A* Back     alignment and structure
>3g40_A Na-K-CL cotransporter; alpha/beta fold 10-stranded twisted beta sheet, transport protein; 1.90A {Methanosarcina acetivorans} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query711
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 99.47
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 99.41
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 99.35
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 99.27
d2z3va1135 Hypothetical protein TTHA0895 {Thermus thermophilu 99.23
d1mjha_160 "Hypothetical" protein MJ0577 {Archaeon Methanococ 99.21
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 99.2
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 99.11
d1jmva_140 Universal stress protein A, UspA {Haemophilus infl 99.0
d1tq8a_147 Hypothetical protein Rv1636 {Mycobacterium tubercu 98.96
d1q77a_138 Hypothetical protein Aq_178 {Aquifex aeolicus [Tax 98.87
d2gm3a1171 Putative ethylene-responsive protein AT3g01520/F4P 98.56
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: Universal stress protein-like
domain: "Hypothetical" protein MJ0577
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.47  E-value=8.9e-14  Score=129.44  Aligned_cols=142  Identities=13%  Similarity=0.102  Sum_probs=98.4

Q ss_pred             ceeEEEEeccCChHHHHHHHHhcCCCCCCcEEEEEEeecccCCCchhhhccccC-CCCCCCCC--------CchHHHHHH
Q 046591          389 LRILACIYEENNVATIINVLGASIFPQRPMELHVLNLEEYVGHSLPLVISHRLD-KMPSSSKP--------TKIDFILNA  459 (711)
Q Consensus       389 ~rILv~i~~~~~~~~~l~la~~~~~~~~~~~v~~lhlvel~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~i~~~  459 (711)
                      .|||||+|.++....+++.+..++ +..+.+++++|+++............... ........        ...++..+.
T Consensus         4 ~~ILvavD~s~~s~~al~~a~~la-~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
T d1mjha_           4 KKILYPTDFSETAEIALKHVKAFK-TLKAEEVILLHVIDEREIKKRDIFSLLLGVAGLNKSVEEFENELKNKLTEEAKNK   82 (160)
T ss_dssp             CEEEEECCSCHHHHHHHHHHHHTC-CSSCCEEEEEEEEEGGGTC-----------------CHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHHHHH-HhcCCEEEEEEecccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence            489999999999999999999999 68889999999998764322211100000 00000000        112223334


Q ss_pred             HHHHHHhc-CCceEEEEEEEEccCCChhHHHHHhhhhcCccEEEeccccC-C--chhHHHHHHHHhhcCCcceEEEecc
Q 046591          460 FRQFEQQS-SGSLSLQCFTATAPYDSMHEDICSMTFEKCTSLVIIPFQKT-N--SYVIKKITKKVLKMAPCSVGILFDR  534 (711)
Q Consensus       460 f~~~~~~~-~~~v~v~~~~~vs~~~~~~~~I~~~A~e~~~dlIimg~h~~-~--~~~~gs~~~~Vl~~ApC~V~ilvdr  534 (711)
                      ++++.+.. ..+++++..+..   ++..+.||+.|++.++||||||+|+. +  +.++||+.++|++++||||+|++.+
T Consensus        83 l~~~~~~~~~~gv~~~~~~~~---G~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~GS~a~~vl~~s~~pVlvV~~~  158 (160)
T d1mjha_          83 MENIKKELEDVGFKVKDIIVV---GIPHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRK  158 (160)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEE---ECHHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHCCSCEEEECCC
T ss_pred             HHHHHHHHHhcCCeEEEEEEe---ccHHHHHhhhhhccccceEEeccCCCCcccccccCcHHHHHHhcCCCCEEEEcCC
Confidence            44443321 346777777665   68999999999999999999999983 3  5568999999999999999998554
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2z3va1 c.26.2.4 (A:2-136) Hypothetical protein TTHA0895 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mjha_ c.26.2.4 (A:) "Hypothetical" protein MJ0577 {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1tq8a_ c.26.2.4 (A:) Hypothetical protein Rv1636 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1q77a_ c.26.2.4 (A:) Hypothetical protein Aq_178 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d2gm3a1 c.26.2.4 (A:5-175) Putative ethylene-responsive protein AT3g01520/F4P13_7 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure