Citrus Sinensis ID: 046592

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560
MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSMKDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPTKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPPNVEKDLPVCKAAASA
ccHHHHHHHHHHccccHHHHHHHHHcccccccEEEcccccccccccccccEEEEEEEEEEcccccccccccccEEEEEEcccccEEEEEEccccccccccccccccccccccccccccccccEEccccccEEEEEcccEEEEcccEEEEEcccccccEEEEEEEEcccccccEEEEEEEEEEEEEEEccccccHHHHHHcccccccccccccccccccccccccEEEEEEEEEccccccEEEEcEEEEEEEEcccccccccccccccccEEEEEEcEEEEEEEEEEEccccEEEEEEEEEcccEEEEEEEEEEEEEEEEEcccccccccccccccccEEEcccEEEEEEEEEEEEEEcccccccccEEEEEEEEEcccccccccccEEEEEEEEEEcHHHHHHccccccccEEEEccccccccccccEEEEEEEccccccccccccccccccccccccEEEEEccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHccHHHHHHHHHccccHccEEEcccccccccccccccEEEEEEEEEEccccccEEcccccEEEEEEccccEEEEEEccccccccccccccccccccccccccccccccEEEEccccccEEEccccEEEEccEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEEccccccccccEEcHHHHHcccccEccccEcccEccccEEEEEEEEcccccEEEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEEcccEEEccccccccccHHHHcccEEEEEccEEEEcEEEEEEEEEEEcccccEEEEEEEEEEEEEcccccccccEEEEEEEEEccEHHHHcEcccccccEEEEEEEEEEEcccccEEEEEEEcccccccccccccHHHHHcHHHHccEEEEEcccccccccccccEcccccccHHHHHHHccEcccEEEEEEEEEEEEEcccHHHccccccEEEEcEEEEccccccccccccccccccccccccccccc
mtiedmtsstwapladeEFNRTILErgvdlkdlaclpislgwygekeenRRLIKVQCYSMkdtanfymrpiegLTILLDMDTKEVLEITdkgknipipkavntdyrYSAQGLHQRMklinpisleqpegpsfviedehLVKWAnwefhlkpdpragaivsqarvrdpdsgeirNVMYKGftselfvpymdptdawYFKTYMdageygfglqampldplndcprnahymdgvfpaadgtpyvrSNMICIFEsyagdigwrhaespitgmgikevrpKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYldmdidgsdnsfVKVNIKrqetspgesprrsylkADRNVAKTEKDAQIklklydpaefhvinptkktrvgnpvgykvvpggtaaslldredppqkrgaftnnqiwvtpyneseqwagGLFVyqskgedtlavwsdrdrsienkdIVLWYTlgfhhipcqedfpimptvsssfdlkpvnffesnpilrippnvekdlpVCKAAASA
mtiedmtsstwapladEEFNRTILergvdlkdlACLPIslgwygekeenrrLIKVQCYSMKDTANFYMRPIEGLTILLDMDTKEVLEItdkgknipipkavnTDYRYSAQGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLkpdpragaivsqarvrdpdsgeirNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPItgmgikevrpKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNIkrqetspgesprrsylkadrnvaktekdaqiklklydpaefhvinptkktrvgnpvgyKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFEsnpilrippnvekdlpvCKAAASA
MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSMKDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPTKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPPNVEKDLPVCKAAASA
***********APLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSMKDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQ********GEIRNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKV*******************************QIKLKLYDPAEFHVINPTKKTRVGNPVGYKVVPGGT***************AFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPP***************
MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSMKDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVN****************************SFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPTKKTRVGNPVGYKVVPGGTAASLLD**DPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPPNVE*****C*A****
**********WAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSMKDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNIKR**************KADRNVAKTEKDAQIKLKLYDPAEFHVINPTKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPPNVEKDLPVCKAAASA
MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSMKDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPTKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPPN**************
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MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSMKDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPTKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPPNVEKDLPVCKAAASA
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query560 2.2.26 [Sep-21-2011]
Q8H1H9712 Primary amine oxidase OS= no no 0.996 0.783 0.645 0.0
Q43077674 Primary amine oxidase OS= N/A no 0.944 0.784 0.457 1e-145
P49252667 Primary amine oxidase (Fr N/A no 0.951 0.799 0.463 1e-145
P80695752 Primary amine oxidase OS= yes no 0.907 0.675 0.337 2e-81
P46883757 Primary amine oxidase OS= N/A no 0.903 0.668 0.331 8e-80
P49250755 Primary amine oxidase OS= yes no 0.901 0.668 0.328 3e-79
Q07123648 Copper methylamine oxidas N/A no 0.901 0.779 0.314 7e-68
Q07121648 Primary amine oxidase OS= N/A no 0.901 0.779 0.314 7e-68
Q59118684 Histamine oxidase OS=Arth N/A no 0.919 0.752 0.321 1e-67
P46881638 Phenylethylamine oxidase N/A no 0.926 0.813 0.291 3e-61
>sp|Q8H1H9|AMO_ARATH Primary amine oxidase OS=Arabidopsis thaliana GN=At1g62810 PE=2 SV=1 Back     alignment and function desciption
 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/561 (64%), Positives = 448/561 (79%), Gaps = 3/561 (0%)

Query: 1   MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSM 60
           +T+ D+ +++  PL   EFNR+I  RGV   DLAC+    GW+G +EE RR+I+VQC+++
Sbjct: 154 LTLNDVFAASQVPLKSLEFNRSIEARGVKFSDLACITPFAGWFGSEEEGRRVIRVQCFTL 213

Query: 61  KDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLIN 120
           + T N++MRP+EGL + +D+D  EV++I DKG  IPIPKA  T+YR+  Q     M  IN
Sbjct: 214 QGTTNYFMRPLEGLYVTVDLDKLEVIKIIDKGP-IPIPKASGTEYRFGVQNKPVHMDRIN 272

Query: 121 PISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGF 180
           PIS+EQP+GPSF +ED HLVKWANW FH+K D RAG I+SQA VRD ++GE R+VMYKGF
Sbjct: 273 PISMEQPDGPSFRVEDGHLVKWANWVFHVKADQRAGMIISQATVRDSETGEPRSVMYKGF 332

Query: 181 TSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPY 240
            SELFVPYMDP + WY+K YMDAGE G G  AMPL PLNDCPRN++Y+DGVF + DG P 
Sbjct: 333 PSELFVPYMDPEEGWYYKGYMDAGELGLGPTAMPLVPLNDCPRNSYYIDGVFASPDGKPI 392

Query: 241 VRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQT 300
           V+ NMIC+FE YAGDI WRH+E       I+E RPKVTLV RMA SV NYDYI DWEFQT
Sbjct: 393 VQPNMICLFERYAGDISWRHSEILFANADIRESRPKVTLVARMATSVGNYDYIFDWEFQT 452

Query: 301 DGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDI 360
           DGLIR+ V  SG+LMVKGT Y+N++ + ++ ++  G L+SENVIGV+HDHFITF+LDMDI
Sbjct: 453 DGLIRVTVAASGMLMVKGTPYDNVDDLGDREDDA-GPLISENVIGVVHDHFITFHLDMDI 511

Query: 361 DGS-DNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPT 419
           DG  +NS VKV++++Q    G+SPR+SYLK  + +AKTEKDAQIKL LYDP EFH++NP 
Sbjct: 512 DGPMNNSLVKVHLEKQRVPTGKSPRKSYLKVKKYIAKTEKDAQIKLSLYDPYEFHIVNPN 571

Query: 420 KKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQS 479
           +K+RVGNP GY++VPGG AASLLD +DPPQ RGAFTNNQIWVTPYN SEQ+AGG+ +YQS
Sbjct: 572 RKSRVGNPAGYRIVPGGNAASLLDHDDPPQIRGAFTNNQIWVTPYNRSEQYAGGVLIYQS 631

Query: 480 KGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNP 539
           +G+DTL VWSDRDRSIENKDIVLWYTLGFHH+PCQED+P+MPTV++SF+LKP NFFESNP
Sbjct: 632 QGDDTLQVWSDRDRSIENKDIVLWYTLGFHHVPCQEDYPVMPTVAASFELKPANFFESNP 691

Query: 540 ILRIPPNVEKDLPVCKAAASA 560
           IL   P  EKDLPVC+  AS+
Sbjct: 692 ILGSAPFFEKDLPVCRPFASS 712

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|Q43077|AMO_PEA Primary amine oxidase OS=Pisum sativum PE=1 SV=1 Back     alignment and function description
>sp|P49252|AMO_LENCU Primary amine oxidase (Fragment) OS=Lens culinaris PE=1 SV=3 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description
>sp|P46883|AMO_ECOLI Primary amine oxidase OS=Escherichia coli (strain K12) GN=tynA PE=1 SV=1 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
255537059 730 Amine oxidase [copper-containing] precur 0.998 0.765 0.883 0.0
224124968594 predicted protein [Populus trichocarpa] 0.987 0.930 0.871 0.0
225426753 727 PREDICTED: primary amine oxidase [Vitis 0.994 0.766 0.814 0.0
449459688 725 PREDICTED: primary amine oxidase-like [C 0.996 0.769 0.807 0.0
59668406563 copper-containing amine oxidase [Solanum 0.998 0.992 0.800 0.0
357462275 731 Primary amine oxidase [Medicago truncatu 0.996 0.763 0.786 0.0
356557184 732 PREDICTED: primary amine oxidase-like [G 0.996 0.762 0.787 0.0
5733089 735 amine oxidase [Canavalia lineata] 0.996 0.759 0.774 0.0
356534598 734 PREDICTED: primary amine oxidase-like [G 0.996 0.760 0.777 0.0
240255790 741 copper amine oxidase family protein [Ara 0.989 0.747 0.767 0.0
>gi|255537059|ref|XP_002509596.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] gi|223549495|gb|EEF50983.1| Amine oxidase [copper-containing] precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score = 1058 bits (2737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/560 (88%), Positives = 535/560 (95%), Gaps = 1/560 (0%)

Query: 1   MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSM 60
           MTIEDMT++TWAPL++ +FNRTI++RGVDLKDLACLPISLGW+G+ EEN+RLIKVQCYSM
Sbjct: 172 MTIEDMTTATWAPLSNADFNRTIIDRGVDLKDLACLPISLGWFGKNEENKRLIKVQCYSM 231

Query: 61  KDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLIN 120
           K TANFYMRPIEGLT+LLDMDTKEV+EI+DKGKNIPIPKA NTDYRYS+  ++Q  +LIN
Sbjct: 232 KGTANFYMRPIEGLTVLLDMDTKEVVEISDKGKNIPIPKAANTDYRYSSVDVNQEKQLIN 291

Query: 121 PISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGF 180
           PIS+EQP+GPSF +EDEH+VKWANWEFHLKPDPRAG I+S ARV+DPDSGEIRNVMYKGF
Sbjct: 292 PISIEQPKGPSFTVEDEHMVKWANWEFHLKPDPRAGVIISSARVKDPDSGEIRNVMYKGF 351

Query: 181 TSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPY 240
           TSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNA+YMDGVF A DGTPY
Sbjct: 352 TSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAYYMDGVFAAGDGTPY 411

Query: 241 VRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQT 300
           VRSNM+CIFESYAGDIGWRHAESPITGM I+EVRPKVTLVVRMAASVANYDYIVDWEFQT
Sbjct: 412 VRSNMVCIFESYAGDIGWRHAESPITGMEIREVRPKVTLVVRMAASVANYDYIVDWEFQT 471

Query: 301 DGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDI 360
           DGLIRIKVGLSGILMVKGT+YENMNQ++ Q ENL+GTLL+ENVIGVIHDH+ITFYLDMDI
Sbjct: 472 DGLIRIKVGLSGILMVKGTSYENMNQVTGQ-ENLYGTLLAENVIGVIHDHYITFYLDMDI 530

Query: 361 DGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPTK 420
           DGSDNSFVKVNI RQ+TSPGESPRRSYLKA RNVAKTEKDAQIKLKLYDP+EFHVINPTK
Sbjct: 531 DGSDNSFVKVNIHRQQTSPGESPRRSYLKATRNVAKTEKDAQIKLKLYDPSEFHVINPTK 590

Query: 421 KTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSK 480
           KTRVGNPVGYKVVPGGTAASLL+ +DPPQKRGAFTNNQIWVTPYN +EQWAGGLFVYQS 
Sbjct: 591 KTRVGNPVGYKVVPGGTAASLLNHDDPPQKRGAFTNNQIWVTPYNRTEQWAGGLFVYQSH 650

Query: 481 GEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPI 540
           GEDTLAVWSDRDR IENKDIV+WYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPI
Sbjct: 651 GEDTLAVWSDRDRPIENKDIVVWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPI 710

Query: 541 LRIPPNVEKDLPVCKAAASA 560
           LRIPPNVEKDLPVC+   +A
Sbjct: 711 LRIPPNVEKDLPVCRPFDTA 730

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class: N/A

Phylum: Streptophyta

Superkingdom:

>gi|224124968|ref|XP_002329858.1| predicted protein [Populus trichocarpa] gi|222871095|gb|EEF08226.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225426753|ref|XP_002275872.1| PREDICTED: primary amine oxidase [Vitis vinifera] Back     alignment and taxonomy information
>gi|449459688|ref|XP_004147578.1| PREDICTED: primary amine oxidase-like [Cucumis sativus] gi|449506121|ref|XP_004162659.1| PREDICTED: primary amine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|59668406|emb|CAI39243.1| copper-containing amine oxidase [Solanum lycopersicum] Back     alignment and taxonomy information
>gi|357462275|ref|XP_003601419.1| Primary amine oxidase [Medicago truncatula] gi|355490467|gb|AES71670.1| Primary amine oxidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356557184|ref|XP_003546898.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|5733089|gb|AAD49420.1|AF172681_1 amine oxidase [Canavalia lineata] Back     alignment and taxonomy information
>gi|356534598|ref|XP_003535840.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|240255790|ref|NP_192966.5| copper amine oxidase family protein [Arabidopsis thaliana] gi|22654995|gb|AAM98089.1| AT4g12290/T4C9_130 [Arabidopsis thaliana] gi|28416507|gb|AAO42784.1| AT4g12290/T4C9_130 [Arabidopsis thaliana] gi|332657711|gb|AEE83111.1| copper amine oxidase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query560
TAIR|locus:2139069741 AT4G12290 [Arabidopsis thalian 0.989 0.747 0.767 3.4e-244
TAIR|locus:2026267712 CuAO1 "COPPER AMINE OXIDASE1" 0.996 0.783 0.645 4.6e-208
TAIR|locus:2080173687 AT3G43670 [Arabidopsis thalian 0.985 0.803 0.641 5.4e-205
TAIR|locus:2028636677 AT1G31690 [Arabidopsis thalian 0.976 0.807 0.479 1.2e-147
TAIR|locus:2028606681 AT1G31710 [Arabidopsis thalian 0.958 0.788 0.463 3.1e-138
UNIPROTKB|Q43077674 Q43077 "Primary amine oxidase" 0.951 0.790 0.459 1.5e-136
TAIR|locus:2139054300 AT4G12280 [Arabidopsis thalian 0.519 0.97 0.779 2.8e-128
TAIR|locus:2129520650 AO1 "amine oxidase 1" [Arabido 0.935 0.806 0.435 2.8e-128
TAIR|locus:2139039460 AT4G12270 [Arabidopsis thalian 0.478 0.582 0.671 4.6e-105
TAIR|locus:2028666741 AT1G31670 [Arabidopsis thalian 0.683 0.516 0.445 2.8e-89
TAIR|locus:2139069 AT4G12290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2353 (833.4 bits), Expect = 3.4e-244, P = 3.4e-244
 Identities = 428/558 (76%), Positives = 478/558 (85%)

Query:     1 MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSM 60
             MTIE+M   T  P ++ +FNRTI+ RGV+L D+ C PIS GW+G KEEN R+IK QC+  
Sbjct:   177 MTIEEMNDITVVPFSNADFNRTIISRGVNLTDVICFPISCGWFGNKEENARVIKSQCFMT 236

Query:    61 KDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLIN 120
             + T NFYMRPIEGLTIL+D+DTK+V+EITD G+ IPIP + NTDYR+       + + +N
Sbjct:   237 QGTPNFYMRPIEGLTILIDLDTKQVIEITDTGRAIPIPGSTNTDYRFQKLATTDKTRPLN 296

Query:   121 PISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGF 180
             PIS+EQP GPSFVIED HLVKWANWEFHLKPDPRAG ++S+ RV DPD+ E R+VMYKGF
Sbjct:   297 PISIEQPRGPSFVIEDNHLVKWANWEFHLKPDPRAGVVISRVRVHDPDTHETRDVMYKGF 356

Query:   181 TSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPY 240
              SELFVPYMDP+DAWYFKTYMDAGEYGFGLQAMPL PLNDCPRNA YMDGVF AADGTP+
Sbjct:   357 VSELFVPYMDPSDAWYFKTYMDAGEYGFGLQAMPLVPLNDCPRNAAYMDGVFAAADGTPF 416

Query:   241 VRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQT 300
             VR NM+CIFESYAGDIGWRH+ESPITG+ I+EVRPKVTLVVRMAASV NYDYI+D+EFQT
Sbjct:   417 VRENMVCIFESYAGDIGWRHSESPITGIPIREVRPKVTLVVRMAASVGNYDYIIDYEFQT 476

Query:   301 DGLIRIKVGLSGILMVKGTAYENMNQISNQA----ENLFGTLLSENVIGVIHDHFITFYL 356
             DGLI+ KVGLSGILMVKGT Y+N NQ+        E L GTLLSENVIGVIHDH++TFYL
Sbjct:   477 DGLIKAKVGLSGILMVKGTTYQNKNQVEKDKDGNEEELHGTLLSENVIGVIHDHYVTFYL 536

Query:   357 DMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVI 416
             D+D+DG DNSFVKVN+KRQET PGESPR+SYLKA RN+AKTEKD QIKL LYDP+EFHVI
Sbjct:   537 DLDVDGPDNSFVKVNLKRQETEPGESPRKSYLKAVRNIAKTEKDGQIKLSLYDPSEFHVI 596

Query:   417 NPTKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFV 476
             N  K TRVGNP GYKVVP  TAASLLD +DPPQKRGAFTNNQIWVTPYN+SEQWAGGLF 
Sbjct:   597 NSGKTTRVGNPTGYKVVPRTTAASLLDHDDPPQKRGAFTNNQIWVTPYNKSEQWAGGLFT 656

Query:   477 YQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFE 536
             YQS G+DTLAVWSDRDR IENKDIV+WYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFE
Sbjct:   657 YQSHGDDTLAVWSDRDRDIENKDIVVWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFE 716

Query:   537 SNPILRIPPNVEKDLPVC 554
              NPIL   PN E DLPVC
Sbjct:   717 RNPILSAAPNFEHDLPVC 734
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005773 "vacuole" evidence=IDA
GO:0005768 "endosome" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2026267 CuAO1 "COPPER AMINE OXIDASE1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080173 AT3G43670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028636 AT1G31690 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028606 AT1G31710 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q43077 Q43077 "Primary amine oxidase" [Pisum sativum (taxid:3888)] Back     alignment and assigned GO terms
TAIR|locus:2139054 AT4G12280 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2129520 AO1 "amine oxidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139039 AT4G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028666 AT1G31670 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.946
3rd Layer1.4.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 0.0
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 1e-152
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 1e-133
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 1e-103
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 5e-30
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information 
 Score =  607 bits (1567), Expect = 0.0
 Identities = 253/532 (47%), Positives = 361/532 (67%), Gaps = 18/532 (3%)

Query: 13  PLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSMKDTANFYMRPIE 72
           PL   +F ++IL RG+++ +++C+P ++GWYGE    +R +K+ C+    + N + RPIE
Sbjct: 131 PLKYPKFKKSILRRGLNISEVSCIPFTVGWYGE-TVTKRALKISCFYRGGSVNVFARPIE 189

Query: 73  GLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLINPISLEQPEGPSF 132
           G++IL+D+D+ ++++ +D+ +  P+PKA  TD+R   +          P S       S 
Sbjct: 190 GISILIDVDSMQIIKYSDRFRA-PLPKAEGTDFRTKHK----------PFSFPCNVSDSG 238

Query: 133 VIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGFTSELFVPYMDPT 192
                H VKWANW+FH+  D RAG  +S A V D      R V+Y+G  SE FVPYMDPT
Sbjct: 239 FTILGHRVKWANWDFHVGFDARAGVTISTASVFDAKVKRFRRVLYRGHVSETFVPYMDPT 298

Query: 193 DAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESY 252
             WYF+T+MD GE+GFG  A+ L PL DCP NA Y+DG    ADG     +N+ICIFE Y
Sbjct: 299 SEWYFRTFMDIGEFGFGRSAVTLQPLIDCPANAVYLDGYVAGADGQAQKMTNVICIFERY 358

Query: 253 AGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSG 312
           +GD+ +RH E  + G  I+   P+++LVVRM A++ NYDYI+DWEF+  G I++ V L+G
Sbjct: 359 SGDVAFRHTEINVPGRVIRSGEPEISLVVRMVATLGNYDYILDWEFKKSGSIKVGVDLTG 418

Query: 313 ILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNI 372
           +L +K T+Y N +QI+   ++++GTL++EN I V HDHF+T+YLD+D+DG+ NSFVK  +
Sbjct: 419 VLEMKATSYTNNDQIT---KDVYGTLVAENTIAVNHDHFLTYYLDLDVDGNGNSFVKAKL 475

Query: 373 KRQETSP--GESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPTKKTRVGNPVGY 430
           +    +     SPR+SY    +  AKTE + +I+L   +PAE  ++NP KKT++GN VGY
Sbjct: 476 QTARVTAVNASSPRKSYWTVVKETAKTEAEGRIRLGS-EPAELLIVNPNKKTKLGNQVGY 534

Query: 431 KVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSD 490
           +++ G    SLL  +D PQ R A+T  Q+WVT YN+SE+WAGG +  +S+G+D LAVWS 
Sbjct: 535 RLITGQPVTSLLSDDDYPQIRAAYTKYQVWVTAYNKSERWAGGFYADRSRGDDGLAVWSS 594

Query: 491 RDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILR 542
           R+R IENKDIVLWYT+GFHHIP QEDFP+MPT+   F+L+P NFFESNP+LR
Sbjct: 595 RNREIENKDIVLWYTVGFHHIPYQEDFPVMPTLHGGFELRPANFFESNPLLR 646

Length = 646
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 560
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.91
PF0924874 DUF1965: Domain of unknown function (DUF1965); Int 85.34
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.1e-176  Score=1449.66  Aligned_cols=534  Identities=36%  Similarity=0.663  Sum_probs=506.5

Q ss_pred             CCHHHHHHHHHhccCCHHHHHHHHHcCCC-CCCEEEccccccccCCC-ccceeEEEEEEEee-cCCCCcccccCCCeEEE
Q 046592            1 MTIEDMTSSTWAPLADEEFNRTILERGVD-LKDLACLPISLGWYGEK-EENRRLIKVQCYSM-KDTANFYMRPIEGLTIL   77 (560)
Q Consensus         1 ~~~~e~~~~~~~~~~~p~~~~~~~~~gl~-~~~v~~dpw~~g~~~~~-~~~~Rl~~~~~~~~-~~~~n~ya~Pl~gl~~~   77 (560)
                      ++.||+.+||++|++||+|+|||+||||+ +++|+||||++||++.. ++++||+|++||+| .+++|+||||||||+++
T Consensus       106 ~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~~~V~~dpw~~G~~~~~~~~~~Rl~~~~~~~r~~~~~n~Ya~Pi~G~~~v  185 (647)
T PRK11504        106 ILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEERGRRLARGLAFVRADPGDNGYARPIEGLVAV  185 (647)
T ss_pred             cCHHHHHHHHHHHhcCHHHHHHHHHcCCCCcceEEEcCccccccCCCCcCCceEEEEEEEEecCCCccccccccCceEEE
Confidence            57899999999999999999999999995 78999999999999875 34799999999999 68999999999999999


Q ss_pred             EeCCCCeEEEEecCCccccCCCCCCCCCcccccCCCCCCCCCCCCeecCCCCCcEEEecCCEEeeeceEEEEeeCCCCcc
Q 046592           78 LDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGA  157 (560)
Q Consensus        78 vD~~~~~v~~~~~~~~~~~~p~~~~~~y~~~~~~~~~~r~~lkp~~i~QPeG~sF~v~~g~~V~W~~W~f~v~f~~reGl  157 (560)
                      ||+++|||++|+|.+. .|+|+.. .+|.++.+. ++ |+++|||+|+||||+||+| +|++|+||||+||||||+||||
T Consensus       186 vDl~~~~vv~i~d~g~-~p~p~~~-~~Y~~~~~~-~~-r~dlkPl~i~QPeG~sF~v-~g~~V~W~~W~f~vgf~~reGl  260 (647)
T PRK11504        186 VDLNTMEVLRVEDHGV-VPIPAED-GNYDPEFIP-PL-RTDLKPLEITQPEGPSFTV-DGNEVEWQKWSFRVGFNPREGL  260 (647)
T ss_pred             EECCCCEEEEEecCCC-CCCCCCC-CCCChhHcc-cc-ccCCCCcceeCCCCCcEEE-cCCEEEECCcEEEEecCCCCce
Confidence            9999999999999986 6777775 699998765 55 9999999999999999999 9999999999999999999999


Q ss_pred             EEEeeEEECCCCCcceeEEEeeeeeeEEeecCCCCCccccceeeecCCCCCCcCCCCCCCCCCCCCCcEEeeeeeecCCC
Q 046592          158 IVSQARVRDPDSGEIRNVMYKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADG  237 (560)
Q Consensus       158 vL~dV~y~d~~~g~~r~Ilyrlsl~Em~vpY~dp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~G  237 (560)
                      +||||+|+|  .|+.||||||+|||||+||||||+++|++|+|||+||||+|.+||+|++||||||+|+|||+++++++|
T Consensus       261 vL~dv~y~d--~g~~R~v~YrlslsEm~VPYgdp~p~~~~k~~fD~GeyG~G~~an~L~lGcDCpg~i~Y~D~~~~~~~G  338 (647)
T PRK11504        261 VLHQVSYDD--GGRERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLGEIRYFDAVLADSDG  338 (647)
T ss_pred             EEEEEEEcC--CCCcceEEEEeeeeeeeeecCCCCcchhhceeeeccccCCcccccccccCCCCCCCCEEcceEEecCCC
Confidence            999999998  566799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ceeEeeceEEEeeecCCCceeecccCCCCCceeeeeeeceEEEEEEeEeecCcceeEEEEEccCCcEEEEEEEeEEEeec
Q 046592          238 TPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVK  317 (560)
Q Consensus       238 ~p~~~~naiCi~E~d~G~~lwkH~~~~~~~~~~~~v~r~r~LVvr~i~TVgNYDY~f~~~F~~DGsIe~ev~aTGil~t~  317 (560)
                      +|++++|||||||+|.| +||||+++|+   +.++++|+|+||||+|+|||||||||+|+|||||+||++|||||||+++
T Consensus       339 ~p~~~~naICihE~D~G-ilwkHt~~r~---~~~~v~r~r~LVvr~I~TVgNYdYi~~w~F~qdG~Ie~eV~aTGil~t~  414 (647)
T PRK11504        339 EPYTIKNAICMHEEDYG-ILWKHTDFRT---GSAEVRRSRRLVISFFATVGNYDYGFYWYFYQDGTIEFEVKLTGIVFTA  414 (647)
T ss_pred             CeEEecCEEEEeeecCC-eeeeeeccCC---CcEEEEeccEEEEEEEEecccccEEEEEEEecCceEEEEEEeeeEEEee
Confidence            99999999999999999 8999999985   3467999999999999999999999999999999999999999999986


Q ss_pred             cccccccccccccccCcccceeccCcccccceeEEeeeeecccCCCCCceEEEEEEEecCCCCCCCcceeeEEEEEEecC
Q 046592          318 GTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKT  397 (560)
Q Consensus       318 ~~~~~~~~~~~~~~~~~yG~~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~~p~~~~~~~~~~~~~t  397 (560)
                      +.   .     .+++.+||++|+|+++|++|||+|||||||||||.+|||+++++++++.+ ++||++++|+++++++++
T Consensus       415 ~~---~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~p~~-~~np~g~~~~~~~t~l~t  485 (647)
T PRK11504        415 AV---P-----PGETPPYGTLVAPGLYAPNHQHFFNARLDMDVDGPGNSVYEVNSVPVPMG-PDNPHGNAFYTRETLLET  485 (647)
T ss_pred             ee---C-----CCccCCCcceecCCcccccceEEEEEEEcccccCCCceEEEEEeEecCCC-CCCccceEEEEEEEEecc
Confidence            62   1     12246899999999999999999999999999999999999999999887 489999999999999999


Q ss_pred             hhhHhhhcCCCCCcEEEEecCCCCCCCCCceeEEEeeCCCcccCCCCCCcccccccccccceEEeecCCCccccCCcCcc
Q 046592          398 EKDAQIKLKLYDPAEFHVINPTKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVY  477 (560)
Q Consensus       398 E~ea~~~~~~~~~r~~~ivN~~~~N~~G~p~gYki~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~~~E~~a~g~y~~  477 (560)
                      |++|+++++++++|+|+|+|++++|++|+|+||||+|++++.+|++++|+..+||+||+||||||+|+|+|+||+|+|+|
T Consensus       486 E~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~  565 (647)
T PRK11504        486 ESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHLWVTPYDPDERYAAGDYPN  565 (647)
T ss_pred             hhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCCCccccCCCCchhhhcchhhhCcEEEeccCCCccccCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCChhcccccCCCcccCCcEEEEEeccccCCCCCCCCCccceeeeeEEEecCCCCCCCCCCCCCCCCCCCCcc
Q 046592          478 QSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPPNVEKDLPVC  554 (560)
Q Consensus       478 q~~~~~gl~~~~~~~e~i~~eDiV~W~t~G~~HvPr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ld~p~~~~~~~~~~  554 (560)
                      |+.+++||+.|+++||+|+|||||||||||+||+||+|||||||++++||+|||+|||++||+||+|++.+...+.|
T Consensus       566 Qs~~~~gl~~~~~~~~~i~~~DiVlW~t~G~~HvPr~ED~PvMP~~~~gf~L~P~nFF~~NPaldvp~s~~~~~~~~  642 (647)
T PRK11504        566 QSAGGDGLPAYIAADRSIENTDVVLWYTFGITHVPRPEDWPVMPVDYAGFKLKPVGFFDRNPALDLPPEPPAACHEH  642 (647)
T ss_pred             cCCCCCCHHHHhcCCCccccCceEEEEecCcccCCChhhCCCCccceEEEEEEcCCCCCCCccccCCCccccccccc
Confidence            99998999999999999999999999999999999999999999999999999999999999999999988444333

>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF09248 DUF1965: Domain of unknown function (DUF1965); InterPro: IPR015328 Members of this family of fungal domains adopt a structure that consists of an alpha/beta motif Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
1w2z_A649 Psao And Xenon Length = 649 1e-145
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 1e-145
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 5e-81
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 5e-80
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 1e-79
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 2e-79
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 2e-79
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 4e-79
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-62
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 1e-61
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-61
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 2e-61
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 4e-61
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 1e-60
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 1e-60
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 2e-60
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 1e-53
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 1e-47
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 1e-47
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 8e-47
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 9e-47
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 4e-46
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 8e-46
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 1e-43
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 1e-43
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 1e-31
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 5e-28
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 3e-26
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 1e-23
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 1e-23
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 1e-23
1rky_A747 Pplo + Xe Length = 747 3e-21
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 1e-20
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure 
Iteration: 1

 Score =  512 bits (1318), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 249/546 (45%), Positives = 361/546 (66%), Gaps = 17/546 (3%)
Query: 1   MTIEDMTSSTWAPLADEEFNRTILERGVDLKDLACLPISLGWYGEKEENRRLIKVQCYSM 60
           +++++ + +   PL    F  ++ +RG++L ++ C   ++GW+GE E+N R +++ C+  
Sbjct: 103 LSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGE-EKNVRTVRLDCFMK 161
Query: 61  KDTANFYMRPIEGLTILLDMDTKEVLEITDKGKNIPIPKAVNTDYRYSAQ----GLHQRM 116
           + T N Y+RPI G+TI+ D+D  +++E  D+     +P A NT+Y+ S Q    G  Q  
Sbjct: 162 ESTVNIYVRPITGITIVADLDLMKIVEYHDRDIE-AVPTAENTEYQVSKQSPPFGPKQ-- 218
Query: 117 KLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVM 176
              + ++  QP+GP F I + H V WANW+FH+  D RAG ++S A + D +  + R V+
Sbjct: 219 ---HSLTSHQPQGPGFQI-NGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVL 274
Query: 177 YKGFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAAD 236
           YKG+ SELFVPY DPT+ +YFKT+ D+GE+GFGL  + L P  DCP +A ++D    +A+
Sbjct: 275 YKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSAN 334
Query: 237 GTPYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDW 296
           GTP +  N IC+FE Y G+I WRH E+ I    I+E R +V L+VR   +V N D ++DW
Sbjct: 335 GTPILLKNAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNXDNVIDW 393
Query: 297 EFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYL 356
           EF+  G I+  + LSGIL +KGT  ++ ++I    E+L G L+S N IG+ HDHF  +YL
Sbjct: 394 EFKASGSIKPSIALSGILEIKGTNIKHKDEIK---EDLHGKLVSANSIGIYHDHFYIYYL 450
Query: 357 DMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVI 416
           D DIDG+ NSF K ++K      G S R+SY   +   AKTE DA+I + L  PAE  V+
Sbjct: 451 DFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGL-APAELVVV 509
Query: 417 NPTKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFV 476
           NP  KT VGN VGY+++P   A  LL  +D PQ RGAFTN  +WVT YN +E+WAGGL+V
Sbjct: 510 NPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYV 569
Query: 477 YQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFE 536
             S+G+DTLAVW+ ++R I NKDIV+W+ +G HH+P QEDFPIMP +S+SF+L+P NFFE
Sbjct: 570 DHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFE 629
Query: 537 SNPILR 542
            NP+L+
Sbjct: 630 RNPVLK 635
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query560
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 1e-174
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 1e-167
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-161
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-152
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 1e-146
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-135
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-133
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-131
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-130
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 560
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-174
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-168
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-164
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-161
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-149
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 3e-34
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 4e-26
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 7e-26
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 2e-25
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

 Score =  499 bits (1285), Expect = e-174
 Identities = 214/436 (49%), Positives = 292/436 (66%), Gaps = 6/436 (1%)

Query: 119 INPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYK 178
            + ++  QP+GP F I + H V WANW+FH+  D RAG ++S A + D +  + R V+YK
Sbjct: 12  QHSLTSHQPQGPGFQI-NGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYK 70

Query: 179 GFTSELFVPYMDPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGT 238
           G+ SELFVPY DPT+ +YFKT+ D+GE+GFGL  + L P  DCP +A ++D    +A+GT
Sbjct: 71  GYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGT 130

Query: 239 PYVRSNMICIFESYAGDIGWRHAESPITGMGIKEVRPKVTLVVRMAASVANYDYIVDWEF 298
           P +  N IC+FE Y   I WRH E+ I    I+E R +V L+VR   +V NYD ++DWEF
Sbjct: 131 PILLKNAICVFEQYGN-IMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNYDNVIDWEF 189

Query: 299 QTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHDHFITFYLDM 358
           +  G I+  + LSGIL +KGT  ++ ++I    E+L G L+S N IG+ HDHF  +YLD 
Sbjct: 190 KASGSIKPSIALSGILEIKGTNIKHKDEI---KEDLHGKLVSANSIGIYHDHFYIYYLDF 246

Query: 359 DIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINP 418
           DIDG+ NSF K ++K      G S R+SY   +   AKTE DA+I + L  PAE  V+NP
Sbjct: 247 DIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGL-APAELVVVNP 305

Query: 419 TKKTRVGNPVGYKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQ 478
             KT VGN VGY+++P   A  LL  +D PQ RGAFTN  +WVT YN +E+WAGGL+V  
Sbjct: 306 NIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDH 365

Query: 479 SKGEDTLAVWSDRDRSIENKDIVLWYTLGFHHIPCQEDFPIMPTVSSSFDLKPVNFFESN 538
           S+G+DTLAVW+ ++R I NKDIV+W+ +G HH+P QEDFPIMP +S+SF+L+P NFFE N
Sbjct: 366 SRGDDTLAVWTKQNREIVNKDIVMWHVVGIHHVPAQEDFPIMPLLSTSFELRPTNFFERN 425

Query: 539 PILRIPPNVEKDLPVC 554
           P+L+     +   P C
Sbjct: 426 PVLKTLSPRDVAWPGC 441
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query560
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.97
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.96
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.95
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.95
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 95.27
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Pea seedling (Pisum sativum) [TaxId: 3888]

Probab=100.00  E-value=9.8e-149  Score=1192.59  Aligned_cols=438  Identities=49%  Similarity=0.910  Sum_probs=415.6

Q ss_pred             cCCCCCCCCCCCCeecCCCCCcEEEecCCEEeeeceEEEEeeCCCCccEEEeeEEECCCCCcceeEEEeeeeeeEEeecC
Q 046592          110 QGLHQRMKLINPISLEQPEGPSFVIEDEHLVKWANWEFHLKPDPRAGAIVSQARVRDPDSGEIRNVMYKGFTSELFVPYM  189 (560)
Q Consensus       110 ~~~~~~r~~lkp~~i~QPeG~sF~v~~g~~V~W~~W~f~v~f~~reGlvL~dV~y~d~~~g~~r~Ilyrlsl~Em~vpY~  189 (560)
                      +.+++ |+++|||.|+||||+||+| +|++|+||+|+|||+|++||||+||||+|.|+.++++||||||||||||+||||
T Consensus         4 ~~p~~-~~~~kp~~i~QPeG~sf~v-~g~~V~W~~W~f~v~f~~r~GlvL~~v~~~D~~~~~gr~I~yrlsl~Em~vpY~   81 (441)
T d1w2za1           4 QSPPF-GPKQHSLTSHQPQGPGFQI-NGHSVSWANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQ   81 (441)
T ss_dssp             CCSCC-CCCCCCCEEECTTCCSEEE-ETTEEEETTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBC
T ss_pred             cCCCC-CCCCCCceeECCCCCCEEE-eCCEEEeCCCEEEEEecCCCcceEEeeEEeeccCCCceEEEEEeeeeeeEEeCC
Confidence            44566 9999999999999999999 999999999999999999999999999999986678899999999999999999


Q ss_pred             CCCCccccceeeecCCCCCCcCCCCCCCCCCCCCCcEEeeeeeecCCCceeEeeceEEEeeecCCCceeecccCCCCCce
Q 046592          190 DPTDAWYFKTYMDAGEYGFGLQAMPLDPLNDCPRNAHYMDGVFPAADGTPYVRSNMICIFESYAGDIGWRHAESPITGMG  269 (560)
Q Consensus       190 dp~~~~~~k~~fD~geyG~G~~a~~L~~G~DCpg~~~YlD~~~~~~~G~p~~~~naiCi~E~d~G~~lwkH~~~~~~~~~  269 (560)
                      ||+++|++|+|||+||||+|.+|++|++|||||++|+|||+++++.+|+|++++|||||||+|.| ++|||+++++.+..
T Consensus        82 dp~~~~~~k~~~D~g~yG~G~~a~~L~~G~DCpg~a~y~d~~~~~~~g~p~~~~naiCifE~d~G-~~~kH~~~~~~~~~  160 (441)
T d1w2za1          82 DPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCPPHAQFIDTYVHSANGTPILLKNAICVFEQYGN-IMWRHTENGIPNES  160 (441)
T ss_dssp             CCSTTTTTCEECHHHHHCTTTTBCCCCTTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEECCC-EEEEEEECCSTTCC
T ss_pred             CCCchhhhceeEcccCccccccccccccCCCCCCCCEEcceEEECCCCCEEeccCeEEEEeccCC-ceeeeecccCCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999 99999999988888


Q ss_pred             eeeeeeceEEEEEEeEeecCcceeEEEEEccCCcEEEEEEEeEEEeeccccccccccccccccCcccceeccCcccccce
Q 046592          270 IKEVRPKVTLVVRMAASVANYDYIVDWEFQTDGLIRIKVGLSGILMVKGTAYENMNQISNQAENLFGTLLSENVIGVIHD  349 (560)
Q Consensus       270 ~~~v~r~r~LVvr~i~TVgNYDY~f~~~F~~DGsIe~ev~aTGil~t~~~~~~~~~~~~~~~~~~yG~~V~~~~~g~~Hq  349 (560)
                      ++++||+++||||+|+|||||||||+|+|||||+||+||||||||++++......++   .+...||++|+|+++|++||
T Consensus       161 ~~~~r~~~~LVvr~i~TVgNYdYi~~~~F~~dGtIe~eV~aTGil~~~~~~~~~~~~---~~~~~yGt~v~p~v~g~~Hq  237 (441)
T d1w2za1         161 IEESRTEVNLIVRTIVTVGNYDNVIDWEFKASGSIKPSIALSGILEIKGTNIKHKDE---IKEDLHGKLVSANSIGIYHD  237 (441)
T ss_dssp             EEEEEECCEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCEEECSCCSGGG---CCSCCSEEEEETTEEEECEE
T ss_pred             eEeeecceeEEEEEEEEecceeEEEEEEEecCceEEEEEEeeeEEEEeeecccccCc---cccCCcceeeccCcccccee
Confidence            899999999999999999999999999999999999999999999987632222221   12468999999999999999


Q ss_pred             eEEeeeeecccCCCCCceEEEEEEEecCCCCCCCcceeeEEEEEEecChhhHhhhcCCCCCcEEEEecCCCCCCCCCcee
Q 046592          350 HFITFYLDMDIDGSDNSFVKVNIKRQETSPGESPRRSYLKADRNVAKTEKDAQIKLKLYDPAEFHVINPTKKTRVGNPVG  429 (560)
Q Consensus       350 H~f~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~~p~~~~~~~~~~~~~tE~ea~~~~~~~~~r~~~ivN~~~~N~~G~p~g  429 (560)
                      |+|||||||||||++|||+++++++++++.+++|++..++++++++++|.+|++.++. ++|+|+|+|++++|++|+|+|
T Consensus       238 H~f~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~a~~~~~~-~~~~~~v~N~~~~N~~G~p~g  316 (441)
T d1w2za1         238 HFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRKSYWTTETQTAKTESDAKITIGL-APAELVVVNPNIKTAVGNEVG  316 (441)
T ss_dssp             EEEEEEEEECTTSSCBEEEEEEEEEEECCSSSCSCSEEEEEEEEECCBGGGGCBCTTS-SCEEEEEEEEEEECTTSCEEE
T ss_pred             eEEEEEEecccCCCCCceEEEEeEeccCCCCCCCCcceEEEEEEEeechhhhhhccCc-CcceEEEeCCCccCcCCCcee
Confidence            9999999999999999999999999998887777777778899999999999998886 689999999999999999999


Q ss_pred             EEEeeCCCcccCCCCCCcccccccccccceEEeecCCCccccCCcCccCCCCCCChhcccccCCCcccCCcEEEEEeccc
Q 046592          430 YKVVPGGTAASLLDREDPPQKRGAFTNNQIWVTPYNESEQWAGGLFVYQSKGEDTLAVWSDRDRSIENKDIVLWYTLGFH  509 (560)
Q Consensus       430 Yki~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~~~E~~a~g~y~~q~~~~~gl~~~~~~~e~i~~eDiV~W~t~G~~  509 (560)
                      |||+|++++++|+.++|+..+||+||+||||||||+|+|+||+|+|++|+++++||++|+++||+|+|||||+|+|||+|
T Consensus       317 YkL~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~q~~~~~gl~~~~~~~~~i~~~DiV~W~t~G~~  396 (441)
T d1w2za1         317 YRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNRTEKWAGGLYVDHSRGDDTLAVWTKQNREIVNKDIVMWHVVGIH  396 (441)
T ss_dssp             EEEECCSCCCCCSCTTSHHHHHTGGGGCSEEEEECCTTCCCTTCSCCBTCCSTTSHHHHGGGCCBCSSBCEEEEEEEEEE
T ss_pred             EEEccCCCCcccCCCCchhhhhhhhhhCcEEEecCCccccCcCCCCcccCCCCCCccchhcCCCcccCCCEEEEEeCCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCccceeeeeEEEecCCCCCCCCCCCCCCCCCCCCcc
Q 046592          510 HIPCQEDFPIMPTVSSSFDLKPVNFFESNPILRIPPNVEKDLPVC  554 (560)
Q Consensus       510 HvPr~ED~Pvmp~~~~~f~L~P~nFFd~nP~ld~p~~~~~~~~~~  554 (560)
                      |+||+|||||||++++||+|+|+|||++||+||+|++.+...|.|
T Consensus       397 H~Pr~ED~Pvmp~~~~gf~L~P~nFF~~nPald~~~~~~~~~~~~  441 (441)
T d1w2za1         397 HVPAQEDFPIMPLLSTSFELRPTNFFERNPVLKTLSPRDVAWPGC  441 (441)
T ss_dssp             ECCCGGGSSSCCCEEEECEEEEESSSSSCTTTTCCCCCCCCTTCC
T ss_pred             cCCChhhcCCcceeeeeEEEECCCCCCCCCccCCCCcccccCCCC
Confidence            999999999999999999999999999999999999999999988
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure