Citrus Sinensis ID: 046632

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-----
Protein Sequence
MERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQPKREELMSGDNDGPVRNSMSGLVQPPPSNNTSEWFNVQDLEKILFDSSTANDE
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccccEEEEcccccccccccccccccccccccccccccccEEcccccccccccccEEEEEEEEcEEcccccccccccccccEEEEEEccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHccccccccHEEEEEEccccccccccccccccccEEEEEcccccccccccccccHcccccEEcccccccccccccccccccccccEEEEEEEEEEEccccccccEEEccEEEEEEEccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
merhqlpalppgyrfaptdeEIVAHYLYNkvhgrpvstsavidnidvyrdeNVWIRIFERTGENALYFFTTLKkktengvqveretncgtwrsqkntrIYRHRYNKTgdkiikkqhigsrrnftyvpkegsrggvikgtWVMHEYRLDGISISNARINNIGDYVICRIkkkqpkreelmsgdndgpvrnsmsglvqpppsnntsewfnvQDLEKILFdsstande
Flexible Loop (DISEMBL)
merhqlpalppgyrfaPTDEEIVAHYLYnkvhgrpvstsavidnidvyrDENVWIRIFERTGENALYFFTtlkkktengvqveretncgtwrsqkntriyrhrynktgdkiikkqhigsrrnftyvpkegsrggvikgTWVMHEYRLDGisisnarinniGDYVICRIKkkqpkreelmsgdndgpvrnSMSGLVQPPPSNNTSEWFNVQDLEKILfdsstande
Low Complexity Region (SEG)
MERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQPKREELMSGDNDGPVRNSMSGLVQPPPSNNTSEWFNVQDLEKILFDSSTANDE
Disordered region (IsUnstruct)
************YRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIK************************************WFNVQDLEKIL*********
Disordered Region (DISOPRED)
******P***PGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRL***************YVICRIKK*******************************************************
Disordered Region (DISEMBL)
MERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKK*********GDNDGPVRNSMSGLVQPPPSNNTSEWFNVQDLEKILFDSSTANDE
Disordered Region (DISPRO)
*******ALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRH**********KKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISIS***INNIGDYVICRIKKKQP****************************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQPKREELMSGDNDGPVRNSMSGLVQPPPSNNTSEWFNVQDLEKILFDSSTANDE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	225	2.2.26 [Sep-21-2011]
Q39013	289	NAC domain-containing pro	no	no	0.853	0.664	0.296	9e-19
Q9FLJ2	336	NAC domain-containing pro	no	no	0.662	0.443	0.339	2e-18
Q8GY42	323	NAC transcription factor	no	no	0.72	0.501	0.324	4e-18
A0SPJ8	406	NAC transcription factor	N/A	no	0.711	0.394	0.295	5e-18
D2SMN4	406	NAC transcription factor	N/A	no	0.711	0.394	0.295	6e-18
A0SPJ3	405	NAC transcription factor	N/A	no	0.728	0.404	0.297	2e-17
O49255	268	NAC transcription factor	no	no	0.693	0.582	0.320	2e-17
A0SPJ4	405	NAC transcription factor	N/A	no	0.724	0.402	0.298	2e-17
Q7F2L3	303	NAC domain-containing pro	no	no	0.666	0.495	0.295	5e-17
A2YMR0	425	NAC transcription factor	N/A	no	0.688	0.364	0.282	2e-16

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score = 93.6 bits (231), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 103/219 (47%), Gaps = 27/219 (12%)

Query: 5   QLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGEN 64
           +L  LPPG+RF PTDEE+V HYL  K   + ++   +I  ID+Y+ +   +      GE 
Sbjct: 3   ELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAV-PIIAEIDLYKYDPWELPGLALYGEK 61

Query: 65  ALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIK-KQHIGSRRNF 123
             YFF+   +K  NG +  R    G W++               DK I   + +G ++  
Sbjct: 62  EWYFFSPRDRKYPNGSRPNRSAGSGYWKAT------------GADKPIGLPKPVGIKKAL 109

Query: 124 TYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINN---IGDYVICRIKKKQPKRE---- 176
            +   +  +G   K  W+MHEYRL  +  S  +  N   + D+V+CRI  K+   E    
Sbjct: 110 VFYAGKAPKGE--KTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGP 167

Query: 177 --ELMSGDNDGPVRNSMSGLVQPPPSNNTSE--WFNVQD 211
              ++ GD     +  ++ +V PPP   TSE  +F+  D
Sbjct: 168 PPPVVYGDEIMEEKPKVTEMVMPPPPQQTSEFAYFDTSD 206

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 16/165 (9%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTDEE++ HYL+ KV     S  A I  +D+ + E   +    + GE   YF
Sbjct: 16  LPPGFRFHPTDEELITHYLHKKVLDTSFSAKA-IGEVDLNKSEPWELPWMAKMGEKEWYF 74

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQ-KNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVP 127
           F    +K   G++  R T  G W++  K+  IYR            K  +G ++   +  
Sbjct: 75  FCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-----------GKSLVGMKKTLVFYR 123

Query: 128 KEGSRGGVIKGTWVMHEYRLDG-ISISNARINNIGDYVICRIKKK 171
               +G   K  WVMHEYRL+G  S  N       ++VICR+ +K
Sbjct: 124 GRAPKGQ--KTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQK 166

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score = 91.3 bits (225), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 95/197 (48%), Gaps = 35/197 (17%)

Query: 7   PALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENAL 66
           P LPPG+RF PTDEE+V HYL  K    P+  S +I  ID+Y+ +   +      GE+  
Sbjct: 14  PHLPPGFRFHPTDEELVVHYLKKKADSVPLPVS-IIAEIDLYKFDPWELPSKASFGEHEW 72

Query: 67  YFFTTLKKKTENGVQVERETNCGTWRSQKNTR-IYRHRYNKTGDKIIKKQHIGSRRNFTY 125
           YFF+   +K  NGV+  R    G W++    + I+    +K          +G ++   +
Sbjct: 73  YFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHK----------VGVKKALVF 122

Query: 126 VPKEGSRGGVIKGTWVMHEYRLDGISISNA---------RINN--IGDYVICRIKKKQPK 174
              +  +G  IK  W+MHEYRL   ++S A         R N+  + D+V+CRI KK   
Sbjct: 123 YGGKPPKG--IKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSS 180

Query: 175 ----------REELMSG 181
                     RE+LM G
Sbjct: 181 QRPTMERVLLREDLMEG 197

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score = 91.3 bits (225), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 23/183 (12%)

Query: 7   PALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENAL 66
           P LPPG+RF PTDEE+V HYL  K    P+  + +I  +D+Y+ +   +      GE+  
Sbjct: 33  PELPPGFRFHPTDEELVVHYLKKKAAKAPLPVT-IIAEVDLYKFDPWELPEKATFGEHEW 91

Query: 67  YFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYV 126
           YFF+   +K  NG +  R    G W++    +         G     ++ +G ++   + 
Sbjct: 92  YFFSPRDRKYANGARPNRAATSGYWKATGTDKPILASATGCG-----REKVGVKKALVFY 146

Query: 127 PKEGSRGGVIKGTWVMHEYRLDGISISNARIN---------------NIGDYVICRIKKK 171
             +  RG  +K  W+MHEYRL G S  +   +                + D+V+CRI KK
Sbjct: 147 RGKPPRG--LKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKK 204

Query: 172 QPK 174
             K
Sbjct: 205 TSK 207

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score = 90.9 bits (224), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 23/183 (12%)

Query: 7   PALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENAL 66
           P LPPG+RF PTDEE+V HYL  K    P+  + +I  +D+Y+ +   +      GE+  
Sbjct: 33  PELPPGFRFHPTDEELVVHYLKKKAAKAPLPVT-IIAEVDLYKFDPWELPEKATFGEHEW 91

Query: 67  YFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYV 126
           YFF+   +K  NG +  R    G W++    +         G     ++ +G ++   + 
Sbjct: 92  YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASATGCG-----REKVGVKKALVFY 146

Query: 127 PKEGSRGGVIKGTWVMHEYRLDGISISNARIN---------------NIGDYVICRIKKK 171
             +  RG  +K  W+MHEYRL G S  +   +                + D+V+CRI KK
Sbjct: 147 RGKPPRG--LKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKK 204

Query: 172 QPK 174
             K
Sbjct: 205 TSK 207

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score = 89.4 bits (220), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 21/185 (11%)

Query: 2   ERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERT 61
           +R   P LPPG+RF PTDEE+V HYL  K    P+  + +I  +D+Y+ +   +      
Sbjct: 26  QRGSAPELPPGFRFHPTDEELVVHYLKKKAAKVPLPVT-IIAEVDLYKFDPWELPEKATF 84

Query: 62  GENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRR 121
           GE   YFF+   +K  NG +  R    G W++    +      + TG  +++++ +G ++
Sbjct: 85  GEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPI--LASGTGCGLVREK-LGVKK 141

Query: 122 NFTYVPKEGSRGGVIKGTWVMHEYRLDGISISN---------------ARINNIGDYVIC 166
              +   +  +G  +K  W+MHEYRL  +S S                A    + D+V+C
Sbjct: 142 ALVFYRGKPPKG--LKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLC 199

Query: 167 RIKKK 171
           RI KK
Sbjct: 200 RIYKK 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 22/178 (12%)

Query: 1   MERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFER 60
           ME      LPPG+RF PTDEE++ +YL N+   +P   S +I  +D+Y+ +   +     
Sbjct: 1   MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVS-IIPEVDIYKFDPWQLPEKTE 59

Query: 61  TGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTG-DKIIK--KQHI 117
            GEN  YFF+  ++K  NGV+  R    G W++             TG DK I     ++
Sbjct: 60  FGENEWYFFSPRERKYPNGVRPNRAAVSGYWKA-------------TGTDKAIHSGSSNV 106

Query: 118 GSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINN---IGDYVICRIKKKQ 172
           G ++   +      +G  IK  W+MHEYRL     ++ + N    + ++V+CRI KK+
Sbjct: 107 GVKKALVFYKGRPPKG--IKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR 162

May function in the transition between active cell division and cell expansion.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ4|NAMB1_TRIDC NAC transcription factor NAM-B1 OS=Triticum dicoccoides GN=NAM-B1 PE=4 SV=1

 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 21/184 (11%)

Query: 3   RHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTG 62
           R   P LPPG+RF PTDEE+V HYL  K    P+  + +I  +D+Y+ +   +      G
Sbjct: 28  RGSAPELPPGFRFHPTDEELVVHYLKKKADKAPLPVN-IIAEVDLYKFDPWELPEKATIG 86

Query: 63  ENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRN 122
           E   YFF+   +K  NG +  R    G W++    +      + TG  +++++ +G ++ 
Sbjct: 87  EQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILA--SGTGCGLVREK-LGVKKA 143

Query: 123 FTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARIN---------------NIGDYVICR 167
             +   +  +G  +K  W+MHEYRL   S S    N                + D+V+CR
Sbjct: 144 LVFYRGKPPKG--LKTNWIMHEYRLTDASGSTTATNRPPPVTGGSRAAASLRLDDWVLCR 201

Query: 168 IKKK 171
           I KK
Sbjct: 202 IYKK 205

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) and the hexaploid wheat (T.aestivum) carry a one bp insertion generating a non-functional allele of this gene. They have a delayed senescence and a lower grain protein, zinc and iron content (PubMed:17124321).

Triticum dicoccoides (taxid: 85692)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score = 87.8 bits (216), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 16/166 (9%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTDEE+V HYL  +  G P++   +I  ID+Y+ +   +      GE   YF
Sbjct: 9   LPPGFRFHPTDEELVMHYLCRRCAGLPIAVP-IIAEIDLYKFDPWQLPRMALYGEKEWYF 67

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPK 128
           F+   +K  NG +  R    G W++    +            +   + +  ++   +   
Sbjct: 68  FSPRDRKYPNGSRPNRAAGSGYWKATGADK-----------PVGSPKPVAIKKALVFYAG 116

Query: 129 EGSRGGVIKGTWVMHEYRLDGISISNARINN--IGDYVICRIKKKQ 172
           +  +G   K  W+MHEYRL  +  S  + N+  + D+V+CRI  K+
Sbjct: 117 KAPKGE--KTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKK 160

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 86.3 bits (212), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 29/184 (15%)

Query: 7   PALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENAL 66
           P LPPG+RF PTDEE+V HYL  K    P+  + +I  +D+Y+ +   +      GE   
Sbjct: 27  PELPPGFRFHPTDEELVVHYLKKKAASVPLPVT-IIAEVDLYKFDPWELPEKANFGEQEW 85

Query: 67  YFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYV 126
           YFF+   +K  NG +  R    G W++    +      +        ++ +G ++   + 
Sbjct: 86  YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMASGS-------TREKVGVKKALVFY 138

Query: 127 PKEGSRGGVIKGTWVMHEYRLDGISISNARINN-------------------IGDYVICR 167
             +  +G  +K  W+MHEYRL   S S A +                     + D+V+CR
Sbjct: 139 RGKPPKG--VKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWVLCR 196

Query: 168 IKKK 171
           I KK
Sbjct: 197 IYKK 200

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
224132940	359	NAC domain protein, IPR003441 [Populus t	0.662	0.415	0.345	9e-19
21105734	312	nam-like protein 3 [Petunia x hybrida]	0.733	0.528	0.338	1e-18
148615629	305	NAC domain protein [Citrus sinensis]	0.706	0.521	0.338	2e-18
224106189	513	NAC domain protein, IPR003441 [Populus t	0.711	0.311	0.337	2e-18
167614348	260	NAC transcription factor ATAF1 [Mikania	0.702	0.607	0.333	3e-18
300507046	271	NAC protein [Medicago sativa]	0.684	0.568	0.35	4e-18
301030577	269	NAC-like protein 5 [Crocus sativus]	0.884	0.739	0.291	4e-18
255547357	361	NAC domain-containing protein 21/22, put	0.782	0.487	0.329	4e-18
363814485	295	uncharacterized protein LOC100779770 [Gl	0.684	0.522	0.327	4e-18
224054978	441	NAC domain protein, IPR003441 [Populus t	0.728	0.371	0.356	4e-18

>gi|224132940|ref|XP_002321447.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222868443|gb|EEF05574.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 99.4 bits (246), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 86/165 (52%), Gaps = 16/165 (9%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTDEE+++HYLY KV     S  A+ D +D+ + E   +    + GE   YF
Sbjct: 17  LPPGFRFHPTDEELISHYLYKKVLDITFSAKAIGD-VDLNKSEPWELPWKAKMGEKEWYF 75

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQ-KNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVP 127
           F    +K   G++  R T  G W++  K+  IYR ++            +G ++   +  
Sbjct: 76  FCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKF-----------LVGMKKTLVFYK 124

Query: 128 KEGSRGGVIKGTWVMHEYRLDG-ISISNARINNIGDYVICRIKKK 171
               +GG  K  WVMHEYRL+G  S+ N       ++VICR+ +K
Sbjct: 125 GRAPKGG--KTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQK 167

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21105734|gb|AAM34766.1|AF509866_1 nam-like protein 3 [Petunia x hybrida]

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 92/183 (50%), Gaps = 18/183 (9%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LP G+RF PTDEE+V HYL  K  G+P+  S +I  ID+Y+ +   +      GE   YF
Sbjct: 13  LPAGFRFHPTDEELVQHYLCQKCAGQPICVS-IIAEIDLYKFDPWQLPEKALYGEKEWYF 71

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKII-KKQHIGSRRNFTYVP 127
           F+   +K  NG +  R    G W++               DK + K + +G ++   +  
Sbjct: 72  FSPRDRKYPNGSRPNRAAGTGYWKA------------TGADKPVGKPRTLGIKKALVFYA 119

Query: 128 KEGSRGGVIKGTWVMHEYRLDGISISNARINN--IGDYVICRIKKKQPKREELMSGDNDG 185
            +  RG  IK  W+MHEYRL  +  S  + NN  + D+V+CRI  K+   E+  + DN  
Sbjct: 120 GKAPRG--IKTNWIMHEYRLANVDRSAGKSNNLRLDDWVLCRIYNKKGTLEKHYNVDNKE 177

Query: 186 PVR 188
            VR
Sbjct: 178 DVR 180

Source: Petunia x hybrida

Species: Petunia x hybrida

Genus: Petunia

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|148615629|gb|ABQ96643.1| NAC domain protein [Citrus sinensis]

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 18/177 (10%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTDEE+V HYL  K  G P+S   +I  ID+Y+ +   +    R GE   YF
Sbjct: 9   LPPGFRFHPTDEELVNHYLCRKCAGLPISV-PIIAEIDLYKYDPWELPEMARYGEKEWYF 67

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKII-KKQHIGSRRNFTYVP 127
           F+   +K  NG +  R    G W++               DK I K + +G ++   +  
Sbjct: 68  FSPRDRKYPNGSRPNRAAGSGYWKA------------TGADKPIGKPKTLGIKKALVFYA 115

Query: 128 KEGSRGGVIKGTWVMHEYRLDGISISNARINN--IGDYVICRIKKKQPKREELMSGD 182
            +  +G  IK  W+MHEYR   +  S A  NN  + D+V+CR+  K+ + E+    D
Sbjct: 116 GKAPKG--IKTNWIMHEYRPANVHRSPATKNNLRLDDWVLCRLYDKKGRMEKHYPSD 170

Source: Citrus sinensis

Species: Citrus sinensis

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106189|ref|XP_002314078.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222850486|gb|EEE88033.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 90/175 (51%), Gaps = 15/175 (8%)

Query: 4   HQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGE 63
           H   + PPGYRF P D E+V HYL NKV G P+  + ++D I    D       +++ GE
Sbjct: 103 HYFNSFPPGYRFCPHDHELVIHYLTNKVKGLPLPRNKIVDVILYQYDPEYLADRYQKFGE 162

Query: 64  NALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNF 123
              YFFT   +K +NG +  R  N G W++    +      N T D+ +    +G R+  
Sbjct: 163 KEWYFFTPRDRKYKNGSRPNRAANGGYWKATGADK------NITHDEAV----VGYRKAL 212

Query: 124 TYVPKEGSRGGVIKGTWVMHEYRLDG--ISISNARIN-NIGDYVICRIKKKQPKR 175
            Y   +  +G   K  W+MHE+R++     + N R +  + ++V+CRI KKQ KR
Sbjct: 213 VYYTGKAPKGD--KTNWIMHEFRVNEPIPQVRNHRDDMRLDEWVLCRIYKKQEKR 265

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|167614348|gb|ABZ89746.1| NAC transcription factor ATAF1 [Mikania micrantha] gi|269856428|gb|ACZ51441.1| NAC transcription factor ATAF1 [Mikania micrantha]

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 88/177 (49%), Gaps = 19/177 (10%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTD+E+V HYL  K   +P+S   +I  ID+Y+ +   +      GE   YF
Sbjct: 8   LPPGFRFHPTDDELVMHYLCRKCASQPISV-PIIAEIDLYKFDPWQLPGMALYGEKEWYF 66

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKII-KKQHIGSRRNFTYVP 127
           F+   +K  NG +  R    G W++               DK I K + +G ++   +  
Sbjct: 67  FSPRDRKYPNGSRPNRAAGTGYWKA------------TGADKPIGKPKPVGIKKALVFYA 114

Query: 128 KEGSRGGVIKGTWVMHEYRLDGISISNARINN---IGDYVICRIKKKQPKREELMSG 181
            +  RG  +K  W+MHEYRL  +  S  + NN   + D+V+CRI  K+   EE   G
Sbjct: 115 GKAPRG--VKTNWIMHEYRLANVDRSAGKRNNNLRLDDWVLCRIYNKKGTLEEHHVG 169

Source: Mikania micrantha

Species: Mikania micrantha

Genus: Mikania

Family: Asteraceae

Order: Asterales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|300507046|gb|ADK23915.1| NAC protein [Medicago sativa]

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 26/180 (14%)

Query: 1   MERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFER 60
           ME      LPPG+RF PTDEE++ HYL N+   +P   S +I  +D+Y+ +   +     
Sbjct: 1   MESSTSYELPPGFRFHPTDEELIVHYLCNQATSKPCPAS-IIPEVDIYKFDPWELPDKSE 59

Query: 61  TGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTG-DKIIK--KQHI 117
            GEN  YFF+  ++K  NGV+  R T  G W++             TG DK IK   + I
Sbjct: 60  FGENEWYFFSPRERKYPNGVRPNRATLSGYWKA-------------TGTDKAIKSGSKQI 106

Query: 118 GSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIG-----DYVICRIKKKQ 172
           G +++  +      +G  +K  W+MHEYRL G     ++  +IG     D+V+CRI KK+
Sbjct: 107 GVKKSLVFYKGRPPKG--VKTDWIMHEYRLIGSQKQTSK--HIGSMRLDDWVLCRIYKKK 162

Source: Medicago sativa

Species: Medicago sativa

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|301030577|gb|ADK47979.1| NAC-like protein 5 [Crocus sativus]

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 31/230 (13%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
            PPG+RF PTDEE+VAHYL  K    P++   +I  ID+Y+ +   +      GE   YF
Sbjct: 8   FPPGFRFHPTDEELVAHYLCRKCASLPLAVP-IIAEIDLYKFDPWELPGLASYGEKEWYF 66

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIK-KQHIGSRRNFTYVP 127
           F+   +K  NG +  R    G W++               DK +   + +  ++   +  
Sbjct: 67  FSPRDRKYPNGSRPNRAAGSGYWKAT------------GADKPVGLPKPVAIKKALVFYA 114

Query: 128 KEGSRGGVIKGTWVMHEYRLDGISISNARINN--IGDYVICRIKKK---QPKREELMS-- 180
            +  +G   K  W+MHEYRL  +  S  + N+  + D+V+CRI KK   +P+RE + S  
Sbjct: 115 GKAPKGE--KSNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYKKKGGEPEREPVGSKF 172

Query: 181 -------GDNDGPVRNSMSGLVQPPPSNNTSEWFNVQD-LEKILFDSSTA 222
                    +   +++ +   V PPP  N   +F+  D L ++  DSS +
Sbjct: 173 LNPNPNPNPSKLEIKSEIFAHVPPPPVTNDMFYFDTSDSLPRLHADSSCS 222

Source: Crocus sativus

Species: Crocus sativus

Genus: Crocus

Family: Iridaceae

Order: Asparagales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255547357|ref|XP_002514736.1| NAC domain-containing protein 21/22, putative [Ricinus communis] gi|223546340|gb|EEF47842.1| NAC domain-containing protein 21/22, putative [Ricinus communis]

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 95/194 (48%), Gaps = 18/194 (9%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTDEE+++HYLY KV     S+ A+ D +D+ + E   +    + GE   YF
Sbjct: 16  LPPGFRFHPTDEELISHYLYKKVLDISFSSRAIGD-VDLNKSEPWELPWKAKMGEKEWYF 74

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQ-KNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVP 127
           F    +K   G++  R T  G W++  K+  IYR            K  +G ++   +  
Sbjct: 75  FCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR-----------GKSLVGMKKTLVFYK 123

Query: 128 KEGSRGGVIKGTWVMHEYRLDG-ISISNARINNIGDYVICRIKKKQP--KREELMSGDND 184
               +G   K  WVMHEYRL+G  SI N       ++VICR+ +K    K+  +      
Sbjct: 124 GRAPKGE--KTNWVMHEYRLEGKYSIHNLPKTAKNEWVICRVFQKSSGGKKTHISGLVRL 181

Query: 185 GPVRNSMSGLVQPP 198
           G   N ++  V PP
Sbjct: 182 GSFGNELAPTVLPP 195

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|363814485|ref|NP_001242877.1| uncharacterized protein LOC100779770 [Glycine max] gi|255640977|gb|ACU20768.1| unknown [Glycine max]

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 20/174 (11%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTDEE+V HYL  K  G+P++   +I  +D+Y+ +   +      GE   YF
Sbjct: 7   LPPGFRFHPTDEELVNHYLCRKCAGQPIAV-PIIKEVDLYKFDPWQLPEIGYYGEKEWYF 65

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKII-KKQHIGSRRNFTYVP 127
           F+   +K  NG +  R    G W++               DK I K + +G ++   +  
Sbjct: 66  FSPRDRKYPNGSRPNRAAGSGYWKAT------------GADKAIGKPKALGIKKALVFYA 113

Query: 128 KEGSRGGVIKGTWVMHEYRLDGISISNARINN----IGDYVICRIKKKQPKREE 177
            +  +G  +K  W+MHEYRL  +  S ++ NN    + D+V+CRI  K+ K E+
Sbjct: 114 GKAPKG--VKTNWIMHEYRLANVDRSASKKNNNNLRLDDWVLCRIYNKKGKIEK 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224054978|ref|XP_002298396.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222845654|gb|EEE83201.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/174 (35%), Positives = 90/174 (51%), Gaps = 10/174 (5%)

Query: 8   ALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYR-DENVWIRIFERTGENAL 66
           + PPGYRF P D E+V HYL  KV G P+  + +I N D+Y+ D       +   GE   
Sbjct: 48  SFPPGYRFRPHDHELVLHYLDKKVKGLPLPMNRII-NADLYQFDPEDLAAQYSHHGEKEW 106

Query: 67  YFFTTLKKKTENGVQVERETNCGTWRSQKNTR--IYRHRYNKTGDKII-KKQHIGSRRNF 123
           YFFT   +K +NG +  R    G W++    +   Y  R  + G KI  +K  +G R+  
Sbjct: 107 YFFTPRNRKYKNGTRPNRAAGGGYWKATGADKGITYEKRVIEAGKKITYQKTLVGHRKAL 166

Query: 124 TYVPKEGSRGGVIKGTWVMHEYRLDG--ISISNARIN-NIGDYVICRIKKKQPK 174
            Y   +  +G   K  W+MHE+RLD   + + N R +  + D V+CRI KK+ K
Sbjct: 167 VYYAGKPPKGD--KTNWIMHEFRLDDSPLHVRNNRDDMRLDDCVLCRIYKKREK 218

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	225
TAIR|locus:2160324	329	NAC080 "NAC domain containing	0.662	0.452	0.345	4.1e-21
TAIR|locus:2061082	316	NAC038 "NAC domain containing	0.711	0.506	0.329	1.5e-19
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.911	0.709	0.293	4e-19
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.684	0.574	0.344	4e-19
TAIR|locus:2163153	336	NAC100 "NAC domain containing	0.688	0.461	0.343	4e-19
TAIR|locus:2033745	283	NAC011 "NAC domain containing	0.8	0.636	0.295	1.4e-18
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.822	0.572	0.340	1.4e-18
TAIR|locus:2075835	451	NAC052 "NAC domain containing	0.662	0.330	0.357	2.2e-18
TAIR|locus:2020123	301	NAC020 "NAC domain containing	0.671	0.501	0.331	2.2e-18
TAIR|locus:2011736	334	CUC3 "CUP SHAPED COTYLEDON3" [	0.711	0.479	0.3	3.9e-18

TAIR|locus:2160324 NAC080 "NAC domain containing protein 80" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 4.1e-21, Sum P(2) = 4.1e-21
 Identities = 57/165 (34%), Positives = 82/165 (49%)

Query:     9 LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
             LPPG+RF PTDEE++ HYL+ KV     S  A I  +D+ + E   +    + GE   YF
Sbjct:    17 LPPGFRFHPTDEELITHYLHKKVLDLGFSAKA-IGEVDLNKAEPWELPYKAKIGEKEWYF 75

Query:    69 FTTLKKKTENGVQVERETNCGTWRSQ-KNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVP 127
             F    +K   G++  R T  G W++  K+  I+R      G     K  +G ++   +  
Sbjct:    76 FCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFR------G-----KSLVGMKKTLVFYR 124

Query:   128 KEGSRGGVIKGTWVMHEYRLDG-ISISNARINNIGDYVICRIKKK 171
                 +G   K  WVMHEYRLDG +S  N       ++VICR+  K
Sbjct:   125 GRAPKGQ--KTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHK 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2061082 NAC038 "NAC domain containing protein 38" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 57/173 (32%), Positives = 91/173 (52%)

Query:     8 ALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALY 67
             ALPPG+RF PTDEE++++YL NK+  +  +  A+ D +D+ + E   +    + G    Y
Sbjct:    15 ALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIAD-VDLNKSEPWELPEKAKMGGKEWY 73

Query:    68 FFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVP 127
             FF+   +K   GV+  R TN G W   K T   +  +N T  +++     G ++   +  
Sbjct:    74 FFSLRDRKYPTGVRTNRATNTGYW---KTTGKDKEIFNSTTSELV-----GMKKTLVFYR 125

Query:   128 KEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQPKREELMS 180
                 RG   K  WVMHEYRL   S S+ R +   ++V+CR+ KK    ++ +S
Sbjct:   126 GRAPRGE--KTCWVMHEYRLH--SKSSYRTSKQDEWVVCRVFKKTEATKKYIS 174

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 69/235 (29%), Positives = 113/235 (48%)

Query:     5 QLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGEN 64
             +L  LPPG+RF PTDEE+V HYL  K   + ++   +I  ID+Y+ +   +      GE 
Sbjct:     3 ELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVP-IIAEIDLYKYDPWELPGLALYGEK 61

Query:    65 ALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTG-DKIIK-KQHIGSRRN 122
               YFF+   +K  NG +  R    G W++             TG DK I   + +G ++ 
Sbjct:    62 EWYFFSPRDRKYPNGSRPNRSAGSGYWKA-------------TGADKPIGLPKPVGIKKA 108

Query:   123 FTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINN---IGDYVICRIKKKQPKREE-- 177
               +   +  +G   K  W+MHEYRL  +  S  +  N   + D+V+CRI  K+   E   
Sbjct:   109 LVFYAGKAPKGE--KTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRG 166

Query:   178 ----LMSGDNDGPVRNSMSGLVQPPPSNNTSE--WFNVQD-LEKILFDSSTANDE 225
                 ++ GD     +  ++ +V PPP   TSE  +F+  D + K+    S+ +++
Sbjct:   167 PPPPVVYGDEIMEEKPKVTEMVMPPPPQQTSEFAYFDTSDSVPKLHTTDSSCSEQ 221

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 62/180 (34%), Positives = 95/180 (52%)

Query:     1 MERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFER 60
             ME      LPPG+RF PTDEE++ +YL N+   +P   S +I  +D+Y+ +  W ++ E+
Sbjct:     1 MEVTSQSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVS-IIPEVDIYKFDP-W-QLPEK 57

Query:    61 T--GENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTG-DKIIKK--Q 115
             T  GEN  YFF+  ++K  NGV+  R    G W++             TG DK I     
Sbjct:    58 TEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKA-------------TGTDKAIHSGSS 104

Query:   116 HIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRL-DGISISNARINN--IGDYVICRIKKKQ 172
             ++G ++   +      +G  IK  W+MHEYRL D    S  R  +  + ++V+CRI KK+
Sbjct:   105 NVGVKKALVFYKGRPPKG--IKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2163153 NAC100 "NAC domain containing protein 100" [Arabidopsis thaliana (taxid:3702)]

 Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 59/172 (34%), Positives = 85/172 (49%)

Query:     2 ERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERT 61
             E  Q+  LPPG+RF PTDEE++ HYL+ KV     S  A I  +D+ + E   +    + 
Sbjct:    10 EEEQMD-LPPGFRFHPTDEELITHYLHKKVLDTSFSAKA-IGEVDLNKSEPWELPWMAKM 67

Query:    62 GENALYFFTTLKKKTENGVQVERETNCGTWRSQ-KNTRIYRHRYNKTGDKIIKKQHIGSR 120
             GE   YFF    +K   G++  R T  G W++  K+  IYR      G     K  +G +
Sbjct:    68 GEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYR------G-----KSLVGMK 116

Query:   121 RNFTYVPKEGSRGGVIKGTWVMHEYRLDG-ISISNARINNIGDYVICRIKKK 171
             +   +      +G   K  WVMHEYRL+G  S  N       ++VICR+ +K
Sbjct:   117 KTLVFYRGRAPKGQ--KTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQK 166

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2033745 NAC011 "NAC domain containing protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 58/196 (29%), Positives = 99/196 (50%)

Query:     9 LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWI---RIFERTGENA 65
             LPPG+RF PTDEE+V +YL+ +  G  +    +I  +D+Y+ +  W    + F    +  
Sbjct:     6 LPPGFRFYPTDEELVGYYLHRRNEGLEIELE-IIPLMDLYKFDP-WELPEKSFLPNRDME 63

Query:    66 LYFFTTLKKKTENGVQVERETNCGTWRSQ-KNTRIYRHRYNKTGDKIIKKQHIGSRRNFT 124
              +FF    +K +NG ++ R T  G W++  K+ +I  H  + +    I     G R+   
Sbjct:    64 WFFFCHRDRKYQNGSRINRATKSGYWKATGKDRKIVCHSSSSSSSSSIT----GCRKTLV 119

Query:   125 YVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQP---KREELMSG 181
             +       GG  +  WVMHEYRL     S   +N  GD+ +CR+ K+     K+ E++S 
Sbjct:   120 FYMGRAPFGG--RTEWVMHEYRLFDNDTSQGSLNFKGDFALCRVIKRNEHTLKKCEIISP 177

Query:   182 D-NDGPVRNSMSGLVQ 196
             + +D  + N+++   Q
Sbjct:   178 EVSDESLSNNVNNFCQ 193

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 75/220 (34%), Positives = 107/220 (48%)

Query:     7 PALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENAL 66
             P LPPG+RF PTDEE+V HYL  K    P+  S +I  ID+Y+ +   +      GE+  
Sbjct:    14 PHLPPGFRFHPTDEELVVHYLKKKADSVPLPVS-IIAEIDLYKFDPWELPSKASFGEHEW 72

Query:    67 YFFTTLKKKTENGVQVERETNCGTWRSQKNTR-IYRHRYNKTGDKIIKKQHIGSRRNFTY 125
             YFF+   +K  NGV+  R    G W++    + I+    +K G   +KK  +     +  
Sbjct:    73 YFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVG---VKKALVF----YGG 125

Query:   126 VPKEGSRGGVIKGTWVMHEYRL-DG-IS-------ISNARINNI--GDYVICRIKKK--- 171
              P +G     IK  W+MHEYRL DG +S       ++  R N++   D+V+CRI KK   
Sbjct:   126 KPPKG-----IKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKKNSS 180

Query:   172 -QPK------REELMSGDNDGPVRNSMSGLVQPPPSNNTS 204
              +P       RE+LM G       NS S  V     NN +
Sbjct:   181 QRPTMERVLLREDLMEGMLSKSSANSSSTSVLDNNDNNNN 220

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2075835 NAC052 "NAC domain containing protein 52" [Arabidopsis thaliana (taxid:3702)]

 Score = 228 (85.3 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 60/168 (35%), Positives = 90/168 (53%)

Query:     8 ALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFER--TGENA 65
             +L PG+RF PTDEE+V++YL  KV G+PV   A I  +D+Y+ E   + +F R  T +  
Sbjct:    26 SLAPGFRFHPTDEELVSYYLKRKVLGQPVRFDA-IGEVDIYKHEPWDLAVFSRLKTRDQE 84

Query:    66 LYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTY 125
              YF++ L KK  NG ++ R TN G W++    R  R       D ++    +G ++  T 
Sbjct:    85 WYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRR------DILL----LGMKK--TL 132

Query:   126 VPKEGSRGGVIKGTWVMHEYRLDGISISNARINN-IGD-YVICRIKKK 171
             V   G     ++  WVMHEYRL  +     +  N + D YV+CR+  K
Sbjct:   133 VFHSGRAPDGLRTNWVMHEYRL--VEYETEKNGNLVQDAYVLCRVFHK 178

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005730 "nucleolus" evidence=IDA

GO:0009555 "pollen development" evidence=IMP

TAIR|locus:2020123 NAC020 "NAC domain containing protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 58/175 (33%), Positives = 87/175 (49%)

Query:     8 ALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWI---RIFERTGEN 64
             +LPPG+RF PTDEE+VA+YL  KV+G+ +    +I  +D+Y+ E  W    + F    + 
Sbjct:     5 SLPPGFRFHPTDEELVAYYLDRKVNGQAIELE-IIPEVDLYKCEP-WDLPEKSFLPGNDM 62

Query:    65 ALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFT 124
               YF++T  KK  NG +  R T  G W++    R              KK  +G ++   
Sbjct:    63 EWYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVES----------KKMKMGMKKTLV 112

Query:   125 YVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQ---PKRE 176
             Y       G  ++  WVMHEYRL     S+ + +    Y +CR+ KK    PKR+
Sbjct:   113 YYRGRAPHG--LRTNWVMHEYRLTHAPSSSLKES----YALCRVFKKNIQIPKRK 161

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2011736 CUC3 "CUP SHAPED COTYLEDON3" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
 Identities = 54/180 (30%), Positives = 92/180 (51%)

Query:     2 ERHQLPALPPGYRFAPTDEEIVAHYLYNKV-HGRPVSTSAV-IDNIDVYRDENVWIRIFE 59
             ER++   LPPG+RF PTDEE++  YL +K+ HG     S + I  +D+ R E   +    
Sbjct:    16 ERNER-GLPPGFRFHPTDEELITFYLASKIFHG---GLSGIHISEVDLNRCEPWELPEMA 71

Query:    60 RTGENALYFFTTLKKKTENGVQVERETNCGTWRSQ-KNTRIYRHRYNKTGDKIIKKQHIG 118
             + GE   YF++   +K   G++  R T  G W++  K+  ++    +  G +++     G
Sbjct:    72 KMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVF----SGGGGQLV-----G 122

Query:   119 SRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQPKREEL 178
              ++   +      RG  +K  WVMHEYRL+  +  + R     ++VICR+  K   R+ +
Sbjct:   123 MKKTLVFYKGRAPRG--LKTKWVMHEYRLE--NDHSHRHTCKEEWVICRVFNKTGDRKNV 178

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010014 "meristem initiation" evidence=IGI;RCA;TAS

GO:0010199 "organ boundary specification between lateral organs and the meristem" evidence=IGI

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010073 "meristem maintenance" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC021 NAC domain protein, IPR003441 (359 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	225
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	2e-29

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  106 bits (266), Expect = 2e-29
 Identities = 50/142 (35%), Positives = 72/142 (50%), Gaps = 14/142 (9%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVW--IRIFERTGENAL 66
           LPPG+RF PTDEE+V +YL  KV G+P+    VI  +D+Y+ E  W       + G+   
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEP-WDLPDGKAKGGDREW 59

Query: 67  YFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYV 126
           YFF+   +K  NG +  R T  G W   K T   +   +K G      + +G ++   + 
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYW---KATGKDKPVLSKGG------EVVGMKKTLVFY 110

Query: 127 PKEGSRGGVIKGTWVMHEYRLD 148
                +G   K  WVMHEYRL+
Sbjct: 111 KGRAPKG--EKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	225
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=1.3e-46  Score=297.61  Aligned_cols=129  Identities=36%  Similarity=0.664  Sum_probs=96.7

Q ss_pred             CCCcceeCCChHHHHHHHHHhhhcCCCCCCCceeeccCCCCCCCccccceeecCcceEEEEEcccccccCCcccccccCC
Q 046632            9 LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVERETNC   88 (225)
Q Consensus         9 LPpGfRF~PTDeELv~~YL~~ki~g~~l~~~~~I~~~Dvy~~~Pw~Lp~~~~~g~~~wyFF~~~~~k~~~g~R~~R~~~~   88 (225)
                      |||||||+|||+|||.+||++|+.|.+++...+|+++|||++|||+|+.....++.+||||+++++++.++.|.+|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            89999999999999999999999999998878999999999999999954334578999999999999999999999999


Q ss_pred             ceeeecCCceeEEcccCCCCcccccceeEEEEEeeeeeccCCCCCCCcccCeEEEEEEeC
Q 046632           89 GTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLD  148 (225)
Q Consensus        89 G~Wk~~g~~k~I~~~~~~~g~~~~~g~~vG~kk~l~Fy~~~g~~~~~~kT~WvMhEY~l~  148 (225)
                      |+||++|+.++|....         |.+||+|++|+||  .++.+++.+|+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~~---------g~~iG~k~~l~f~--~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDPG---------GKVIGFKKTLVFY--SGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE-T---------TCEEEEEEEEEEE--ESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeeccccccccccc---------ceeeeeEEEEEEE--eccCCCCCcCCeEEEEEEeC
Confidence            9999999999999853         5789999999999  88888899999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	225
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		5e-17
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		5e-17
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		4e-14

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 83/168 (49%), Gaps = 20/168 (11%)
Query: 8   ALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALY 67
           +LPPG+RF PTDEE++  YL  K  G   S   +I  ID+Y+ +   +      GE   Y
Sbjct: 19  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ-LIAEIDLYKFDPWVLPNKALFGEKEWY 77
Query: 68  FFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTG-DKII--KKQHIGSRRNFT 124
           FF+   +K  NG +  R    G W++             TG DKII  + Q +G ++   
Sbjct: 78  FFSPRDRKYPNGSRPNRVAGSGYWKA-------------TGTDKIISTEGQRVGIKKALV 124
Query: 125 YVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQ 172
           +   +  +G   K  W+MHEYRL   S  N     + D+V+CRI KKQ
Sbjct: 125 FYIGKAPKG--TKTNWIMHEYRLIEPSRRNGS-TKLDDWVLCRIYKKQ 169

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 8   ALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALY 67
           +LPPG+RF PTDEE++  YL  K  G   S   +I  ID+Y+ +   +      GE   Y
Sbjct: 16  SLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ-LIAEIDLYKFDPWVLPNKALFGEKEWY 74
Query: 68  FFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKII--KKQHIGSRRNFTY 125
           FF+   +K  NG +  R    G W++               DKII  + Q +G ++   +
Sbjct: 75  FFSPRDRKYPNGSRPNRVAGSGYWKATGT------------DKIISTEGQRVGIKKALVF 122
Query: 126 VPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQ 172
              +  +G   K  W+MHEYRL   S  N     + D+V+CRI KKQ
Sbjct: 123 YIGKAPKG--TKTNWIMHEYRLIEPSRRNGS-TKLDDWVLCRIYKKQ 166

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTD+E+V HYL  K  G+ +    +I  +D+Y+ +   +      G    YF
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVP-IIAEVDLYKFDPWDLPERALFGAREWYF 73
Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKII--KKQHIGSRRNFTYV 126
           FT   +K  NG +  R    G W++               DK +  + + +G ++   + 
Sbjct: 74  FTPRDRKYPNGSRPNRAAGNGYWKAT------------GADKPVAPRGRTLGIKKALVFY 121
Query: 127 PKEGSRGGVIKGTWVMHEYRLDGISISNARIN----NIGDYVICRIKKKQ 172
             +  RG  +K  W+MHEYRL     + A        + D+V+CR+  K+
Sbjct: 122 AGKAPRG--VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK 169

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	225
1ut7_A	171	No apical meristem protein; transcription regulati	2e-33
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	7e-33

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  117 bits (295), Expect = 2e-33
 Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 36/182 (19%)

Query: 1   MERHQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFE- 59
            +     +LPPG+RF PTDEE++  YL  K  G   S   +I  ID+Y+        F+ 
Sbjct: 9   TDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ-LIAEIDLYK--------FDP 59

Query: 60  -------RTGENALYFFTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTG-DKI 111
                    GE   YFF+   +K  NG +  R    G W++             TG DKI
Sbjct: 60  WVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKA-------------TGTDKI 106

Query: 112 I--KKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIK 169
           I  + Q +G ++   +   +  +G   K  W+MHEYRL   S  N     + D+V+CRI 
Sbjct: 107 ISTEGQRVGIKKALVFYIGKAPKG--TKTNWIMHEYRLIEPSRRNGS-TKLDDWVLCRIY 163

Query: 170 KK 171
           KK
Sbjct: 164 KK 165

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  115 bits (291), Expect = 7e-33
 Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 23/176 (13%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTD+E+V HYL  K  G+ +    +I  +D+Y+ +   +      G    YF
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPVP-IIAEVDLYKFDPWDLPERALFGAREWYF 73

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTG-DKII--KKQHIGSRRNFTY 125
           FT   +K  NG +  R    G W++             TG DK +  + + +G ++   +
Sbjct: 74  FTPRDRKYPNGSRPNRAAGNGYWKA-------------TGADKPVAPRGRTLGIKKALVF 120

Query: 126 VPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIG----DYVICRIKKKQPKREE 177
              +  RG  +K  W+MHEYRL     + A          D+V+CR+  K+ + E+
Sbjct: 121 YAGKAPRG--VKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	225
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=2.1e-60  Score=393.02  Aligned_cols=157  Identities=29%  Similarity=0.585  Sum_probs=136.2

Q ss_pred             CCCCCCCCcceeCCChHHHHHHHHHhhhcCCCCCCCceeeccCCCCCCCccccceeecCcceEEEEEcccccccCCcccc
Q 046632            4 HQLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVE   83 (225)
Q Consensus         4 ~~~~~LPpGfRF~PTDeELv~~YL~~ki~g~~l~~~~~I~~~Dvy~~~Pw~Lp~~~~~g~~~wyFF~~~~~k~~~g~R~~   83 (225)
                      .+.+.|||||||+|||||||.|||++|+.|.+++. .+|+++|||++|||+||+.+..|+.+||||+++++||++|.|++
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~-~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~n   88 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPN   88 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSS-SCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSC
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCc-CeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCce
Confidence            35689999999999999999999999999999998 89999999999999999998888999999999999999999999


Q ss_pred             cccCCceeeecCCceeEEcccCCCCcccccceeEEEEEeeeeeccCCCCCCCcccCeEEEEEEeCCCCccc----cccCC
Q 046632           84 RETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISN----ARINN  159 (225)
Q Consensus        84 R~~~~G~Wk~~g~~k~I~~~~~~~g~~~~~g~~vG~kk~l~Fy~~~g~~~~~~kT~WvMhEY~l~~~~~~~----~~~~~  159 (225)
                      |+|++||||++|++++|...          |.+||+||+|+||  .|+++++.+|+|+||||+|......+    .....
T Consensus        89 R~t~~G~WkatG~dk~I~~~----------g~~vG~KktLvFy--~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~  156 (174)
T 3ulx_A           89 RAAGNGYWKATGADKPVAPR----------GRTLGIKKALVFY--AGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLR  156 (174)
T ss_dssp             EEETTEEEEECSCCEEECCS----------SSCCEEEEEEEEE--ESSTTSCEEEEEEEEEEEECSCC-----------C
T ss_pred             eecCCceEccCCCCcEEeeC----------CcEEEEEEEEEEe--cCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCC
Confidence            99999999999999999864          3789999999999  99999999999999999999875432    11235


Q ss_pred             CCcEEEEEEEEcCC
Q 046632          160 IGDYVICRIKKKQP  173 (225)
Q Consensus       160 ~~~~VLCrI~~k~~  173 (225)
                      .++|||||||+|+.
T Consensus       157 ~~~wVlCrvf~K~~  170 (174)
T 3ulx_A          157 LDDWVLCRLYNKKN  170 (174)
T ss_dssp             CSSEEEEEEEESCC
T ss_pred             CCCEEEEEEEEcCC
Confidence            78999999999965

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=1.4e-59  Score=387.63  Aligned_cols=156  Identities=34%  Similarity=0.601  Sum_probs=132.1

Q ss_pred             CCCCCCCcceeCCChHHHHHHHHHhhhcCCCCCCCceeeccCCCCCCCccccceeecCcceEEEEEcccccccCCccccc
Q 046632            5 QLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVER   84 (225)
Q Consensus         5 ~~~~LPpGfRF~PTDeELv~~YL~~ki~g~~l~~~~~I~~~Dvy~~~Pw~Lp~~~~~g~~~wyFF~~~~~k~~~g~R~~R   84 (225)
                      ..+.|||||||+|||||||.|||++|+.|.+++. .+|+++|||++|||+||+.+..|+.+||||+++++||++|.|++|
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~-~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R   91 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSL-QLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNR   91 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSS-CCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCE
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCC-CeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCcccc
Confidence            4589999999999999999999999999999998 899999999999999999988889999999999999999999999


Q ss_pred             ccCCceeeecCCceeEEcccCCCCcccccceeEEEEEeeeeeccCCCCCCCcccCeEEEEEEeCCCCccccccCCCCcEE
Q 046632           85 ETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYV  164 (225)
Q Consensus        85 ~~~~G~Wk~~g~~k~I~~~~~~~g~~~~~g~~vG~kk~l~Fy~~~g~~~~~~kT~WvMhEY~l~~~~~~~~~~~~~~~~V  164 (225)
                      +|++||||++|++++|...          +.+||+||+|+||  .|+++++.+|+|+||||+|......+ .....++||
T Consensus        92 ~t~~G~Wk~tG~~k~I~~~----------~~~vG~KktLvFy--~g~~p~g~kT~WvMhEY~l~~~~~~~-~~~~~~~~V  158 (171)
T 1ut7_A           92 VAGSGYWKATGTDKIISTE----------GQRVGIKKALVFY--IGKAPKGTKTNWIMHEYRLIEPSRRN-GSTKLDDWV  158 (171)
T ss_dssp             EETTEEEEEEEEEEEEEET----------TEEEEEEEEEEEE--ESSTTSCEEEEEEEEEEEECCCC---------CCEE
T ss_pred             cCCCCEEeccCCCceEEec----------CcEEEEEEEEEEE--cCcCCCCCcCCeEEEEEEcCCCcccc-CcccCCCEE
Confidence            9999999999999999974          3789999999999  89999999999999999999875321 123578999


Q ss_pred             EEEEEEcCCC
Q 046632          165 ICRIKKKQPK  174 (225)
Q Consensus       165 LCrI~~k~~~  174 (225)
                      |||||+|+..
T Consensus       159 lCrv~~k~~~  168 (171)
T 1ut7_A          159 LCRIYKKQSS  168 (171)
T ss_dssp             EEEEEECC--
T ss_pred             EEEEEEcCCC
Confidence            9999999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	225
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	3e-32

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  113 bits (283), Expect = 3e-32
 Identities = 52/164 (31%), Positives = 77/164 (46%), Gaps = 14/164 (8%)

Query: 9   LPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYF 68
           LPPG+RF PTDEE++  YL  K  G   S   +I  ID+Y+ +   +      GE   YF
Sbjct: 17  LPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ-LIAEIDLYKFDPWVLPNKALFGEKEWYF 75

Query: 69  FTTLKKKTENGVQVERETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPK 128
           F+   +K  NG +  R    G W++    +I             + Q +G ++   +   
Sbjct: 76  FSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIST----------EGQRVGIKKALVFYIG 125

Query: 129 EGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYVICRIKKKQ 172
           +  +G   K  W+MHEYRL   S        + D+V+CRI KKQ
Sbjct: 126 KAPKG--TKTNWIMHEYRLIEPS-RRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	225
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-56  Score=366.50  Aligned_cols=154  Identities=34%  Similarity=0.608  Sum_probs=130.8

Q ss_pred             CCCCCCCcceeCCChHHHHHHHHHhhhcCCCCCCCceeeccCCCCCCCccccceeecCcceEEEEEcccccccCCccccc
Q 046632            5 QLPALPPGYRFAPTDEEIVAHYLYNKVHGRPVSTSAVIDNIDVYRDENVWIRIFERTGENALYFFTTLKKKTENGVQVER   84 (225)
Q Consensus         5 ~~~~LPpGfRF~PTDeELv~~YL~~ki~g~~l~~~~~I~~~Dvy~~~Pw~Lp~~~~~g~~~wyFF~~~~~k~~~g~R~~R   84 (225)
                      .+++|||||||+|||||||.|||++||.|.+++. .+|+++|||++|||+||+.+..++.+||||+++.+++++|.|.+|
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~-~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R   91 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSL-QLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNR   91 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSS-CCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCE
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCc-ccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCcccc
Confidence            5689999999999999999999999999999998 899999999999999999887788999999999999999999999


Q ss_pred             ccCCceeeecCCceeEEcccCCCCcccccceeEEEEEeeeeeccCCCCCCCcccCeEEEEEEeCCCCccccccCCCCcEE
Q 046632           85 ETNCGTWRSQKNTRIYRHRYNKTGDKIIKKQHIGSRRNFTYVPKEGSRGGVIKGTWVMHEYRLDGISISNARINNIGDYV  164 (225)
Q Consensus        85 ~~~~G~Wk~~g~~k~I~~~~~~~g~~~~~g~~vG~kk~l~Fy~~~g~~~~~~kT~WvMhEY~l~~~~~~~~~~~~~~~~V  164 (225)
                      ++++|+||++|+++.|...          |.+||+||+|+||  +++++++.+|+|+||||+|.+..... .....++||
T Consensus        92 ~~g~G~Wk~~g~~~~i~~~----------g~~vG~kk~l~fy--~~~~~~~~~t~W~M~EY~l~~~~~~~-~~~~~~~~V  158 (166)
T d1ut7a_          92 VAGSGYWKATGTDKIISTE----------GQRVGIKKALVFY--IGKAPKGTKTNWIMHEYRLIEPSRRN-GSTKLDDWV  158 (166)
T ss_dssp             EETTEEEEEEEEEEEEEET----------TEEEEEEEEEEEE--ESSTTSCEEEEEEEEEEEECCCC---------CCEE
T ss_pred             ccCCCEecccCCCceEecC----------CcEEEEEEEEEEE--ecCCCCCCccCeEEEEEecCCccccc-CccccCCEE
Confidence            9999999999999988763          4889999999999  89999999999999999998876543 234677999


Q ss_pred             EEEEEEcC
Q 046632          165 ICRIKKKQ  172 (225)
Q Consensus       165 LCrI~~k~  172 (225)
                      |||||+|+
T Consensus       159 LCrI~~Kk  166 (166)
T d1ut7a_         159 LCRIYKKQ  166 (166)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEecC
Confidence            99999984