Citrus Sinensis ID: 046644

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230----
MLETQEGVSRRIYPFRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLEYTKSSEGLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPLYKPVL
ccHHHccccHHHHHHHHHHHccccHHHHHHHccccccccEEEEccccccccccccccEEEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEccccccccccccccccccccccccEEEEEEcccccEEEEEcccccEEEcccccccEEEEEccEEEEEEcccccccccEEEEcccccEEEEEEEEcccccccEEcccccccccccccccccc
cEEEcccccHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEEEcccccccccHHHEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccccEccccccccccEEEEEEccccccEEEEEccccEEEEEcccccEEEEEEccHHEEEccccEcEEEEEEEEcccccEEEEEEEcccccccEEcccHHHccccccccccccc
mletqegvsrriypfRYVAYAGEwskekrkyskensptnnarfgsSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLeytksseglnvkRIDEIRALMLLGSrrvnlnyypmcpnpehtvgvgrhsdisTFTILLQddigglhvrkdngngwiHVSLISRSFIiniwdplqiiskgrhKSIEYCVIANGSQNMILVLLFvnpkpegilcpfpevlangkkplykpvl
mletqegvsrriypfryVAYAgewskekrkyskensptnnarfgssFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLEYtksseglnvkriDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPfpevlangkkplykpvl
MLETQEGVSRRIYPFRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLEYTKSSEGLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPLYKPVL
*********RRIYPFRYVAYAGEW******************FGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLEYTKSSEGLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPEVLAN**********
MLETQEGVSRRIYPFRYVAYAGEWSKEKRKY*******N*ARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLEYTKSSEGLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPLYKPVL
********SRRIYPFRYVAYAGEWSKE*********PTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLEYTKSSEGLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPLYKPVL
MLETQEGVSRRIYPFRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLEYTKSSEGLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPL*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MLETQEGVSRRIYPFRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLEYTKSSEGLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPLYKPVL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query234 2.2.26 [Sep-21-2011]
Q9LHN8361 Feruloyl CoA ortho-hydrox yes no 0.893 0.578 0.547 5e-68
Q9C899361 Feruloyl CoA ortho-hydrox no no 0.893 0.578 0.547 1e-67
Q7XZQ8365 Flavone synthase OS=Petro N/A no 0.807 0.517 0.292 7e-23
O04847401 Deacetoxyvindoline 4-hydr N/A no 0.846 0.493 0.326 9e-23
Q43383398 1-aminocyclopropane-1-car no no 0.850 0.5 0.331 1e-22
Q05963356 Naringenin,2-oxoglutarate N/A no 0.726 0.477 0.313 2e-22
Q07353369 Naringenin,2-oxoglutarate N/A no 0.726 0.460 0.313 2e-22
Q84MB3365 1-aminocyclopropane-1-car no no 0.846 0.542 0.314 2e-22
Q05965357 Naringenin,2-oxoglutarate N/A no 0.726 0.476 0.297 2e-22
P41090364 Naringenin,2-oxoglutarate no no 0.760 0.489 0.289 8e-22
>sp|Q9LHN8|F6H1_ARATH Feruloyl CoA ortho-hydroxylase 1 OS=Arabidopsis thaliana GN=F6'H1 PE=1 SV=1 Back     alignment and function desciption
 Score =  257 bits (657), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 121/221 (54%), Positives = 160/221 (72%), Gaps = 12/221 (5%)

Query: 26  KEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLE 85
           +EKRK++KENS +   RFG+SF   AE+ALEWKD+LS+F+VSE E   FWP +C++E LE
Sbjct: 117 EEKRKFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQFWPDICRNETLE 176

Query: 86  YTKSSE------------GLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHS 133
           Y   S+             LNVK +DE +  + +GS RVNLNYYP+CPNP+ TVGVGRHS
Sbjct: 177 YINKSKKMVRRLLEYLGKNLNVKELDETKESLFMGSIRVNLNYYPICPNPDLTVGVGRHS 236

Query: 134 DISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVI 193
           D+S+ TILLQD IGGLHVR      W+HV  ++ SF+INI D +QI+S G +KS+E+ V+
Sbjct: 237 DVSSLTILLQDQIGGLHVRSLASGNWVHVPPVAGSFVINIGDAMQIMSNGLYKSVEHRVL 296

Query: 194 ANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPLYKPVL 234
           ANG  N I V +FVNPKPE ++ P PEV+ANG++P+Y+ VL
Sbjct: 297 ANGYNNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVL 337
2-oxoglutarate (OG)- and Fe(II)-dependent dioxygenase (2OGD)involved in scopoletin biosynthesis. Converts feruloyl CoA into 6'-hydroxyferuloyl CoA but has no activity with ferulic acid, feruloylquinic acid, caffeic acid, caffeoyl CoA, p-coumaric acid, cinnamic acid, cinnamoyl CoA or benzoyl CoA.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q9C899|F6H2_ARATH Feruloyl CoA ortho-hydroxylase 2 OS=Arabidopsis thaliana GN=F6'H2 PE=1 SV=1 Back     alignment and function description
>sp|Q7XZQ8|FNSI_PETCR Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1 Back     alignment and function description
>sp|O04847|DV4H_CATRO Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2 Back     alignment and function description
>sp|Q43383|ACCH5_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 5 OS=Arabidopsis thaliana GN=2A6 PE=2 SV=2 Back     alignment and function description
>sp|Q05963|FL3H_CALCH Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|Q07353|FL3H_PETHY Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1 Back     alignment and function description
>sp|Q84MB3|ACCH1_ARATH 1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1 Back     alignment and function description
>sp|Q05965|FL3H_MATIN Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1 Back     alignment and function description
>sp|P41090|FL3H_VITVI Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query234
354696022 363 citrus dioxygenase [Citrus limetta] 0.974 0.628 0.742 6e-95
224057036 358 predicted protein [Populus trichocarpa] 0.893 0.583 0.608 2e-71
255569732 363 leucoanthocyanidin dioxygenase, putative 0.918 0.592 0.567 2e-71
255569728 362 leucoanthocyanidin dioxygenase, putative 0.974 0.629 0.546 4e-71
255569730 362 leucoanthocyanidin dioxygenase, putative 0.918 0.593 0.571 6e-71
255569726 362 leucoanthocyanidin dioxygenase, putative 0.974 0.629 0.538 2e-70
358635024 358 oxidoreductase [Ipomoea batatas] 0.974 0.636 0.542 3e-70
225435722 358 PREDICTED: 1-aminocyclopropane-1-carboxy 0.918 0.600 0.588 6e-70
225435724 358 PREDICTED: 1-aminocyclopropane-1-carboxy 0.918 0.600 0.584 6e-70
358635020 358 oxidoreductase [Ipomoea batatas] 0.974 0.636 0.538 6e-70
>gi|354696022|gb|AER36089.1| citrus dioxygenase [Citrus limetta] Back     alignment and taxonomy information
 Score =  352 bits (904), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 182/245 (74%), Positives = 193/245 (78%), Gaps = 17/245 (6%)

Query: 2   LETQEGVSRRIYPFRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFL 61
           LE  E V    +  R+ A   E   EKRKYSKENSP NN R+GSSFV H ERALEWKDFL
Sbjct: 97  LEVLERVKEATH--RFFALPAE---EKRKYSKENSPINNVRYGSSFVPHVERALEWKDFL 151

Query: 62  SMFYVSEEEIAAFWPSVCKDEMLEYTKSSEG------------LNVKRIDEIRALMLLGS 109
           S+FYVSEEE +AFWP VCKDEMLEY +SSE             LNVKRIDEIR  MLLGS
Sbjct: 152 SLFYVSEEETSAFWPPVCKDEMLEYMRSSEVFIKRLMHVLVKVLNVKRIDEIREPMLLGS 211

Query: 110 RRVNLNYYPMCPNPEHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSF 169
           RRVNLNYYPMCPNPE TVGVGRHSDISTFTILLQDDIGGLHVRKDNG  WIH + IS S 
Sbjct: 212 RRVNLNYYPMCPNPELTVGVGRHSDISTFTILLQDDIGGLHVRKDNGTDWIHAAPISGSL 271

Query: 170 IINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPL 229
           IINI D LQI+S GR+KSIE+CVIANGSQN I V LFVNPKPE ILCPFPEVLANG+KPL
Sbjct: 272 IINIGDALQIMSNGRNKSIEHCVIANGSQNRISVPLFVNPKPEAILCPFPEVLANGEKPL 331

Query: 230 YKPVL 234
           YKPVL
Sbjct: 332 YKPVL 336

Source: Citrus limetta

Species: Citrus limetta

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224057036|ref|XP_002299115.1| predicted protein [Populus trichocarpa] gi|222846373|gb|EEE83920.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255569732|ref|XP_002525830.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223534835|gb|EEF36524.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255569728|ref|XP_002525828.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223534833|gb|EEF36522.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255569730|ref|XP_002525829.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223534834|gb|EEF36523.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|255569726|ref|XP_002525827.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223534832|gb|EEF36521.1| leucoanthocyanidin dioxygenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|358635024|dbj|BAL22345.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information
>gi|225435722|ref|XP_002285699.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225435724|ref|XP_002285698.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 11 [Vitis vinifera] Back     alignment and taxonomy information
>gi|358635020|dbj|BAL22343.1| oxidoreductase [Ipomoea batatas] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query234
TAIR|locus:2086789361 AT3G13610 [Arabidopsis thalian 0.893 0.578 0.547 1.4e-62
TAIR|locus:2035671361 AT1G55290 [Arabidopsis thalian 0.893 0.578 0.556 2.3e-62
TAIR|locus:2090359357 AT3G12900 [Arabidopsis thalian 0.888 0.582 0.413 1.2e-40
TAIR|locus:505006595360 AT5G12270 [Arabidopsis thalian 0.897 0.583 0.367 1.7e-36
TAIR|locus:2042942353 AT2G38240 [Arabidopsis thalian 0.5 0.331 0.391 1.7e-27
TAIR|locus:2127691349 AT4G10500 [Arabidopsis thalian 0.829 0.555 0.311 2e-24
TAIR|locus:2052781358 AT2G30830 [Arabidopsis thalian 0.880 0.575 0.325 6.8e-24
TAIR|locus:2127686348 AT4G10490 [Arabidopsis thalian 0.829 0.557 0.306 1.1e-23
TAIR|locus:2020798398 2A6 [Arabidopsis thaliana (tax 0.854 0.502 0.342 4.1e-23
TAIR|locus:2052796362 AT2G30840 [Arabidopsis thalian 0.858 0.555 0.336 6.1e-23
TAIR|locus:2086789 AT3G13610 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 639 (230.0 bits), Expect = 1.4e-62, P = 1.4e-62
 Identities = 121/221 (54%), Positives = 160/221 (72%)

Query:    26 KEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSVCKDEMLE 85
             +EKRK++KENS +   RFG+SF   AE+ALEWKD+LS+F+VSE E   FWP +C++E LE
Sbjct:   117 EEKRKFTKENSLSTTVRFGTSFSPLAEQALEWKDYLSLFFVSEAEAEQFWPDICRNETLE 176

Query:    86 YTKSSE------------GLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTVGVGRHS 133
             Y   S+             LNVK +DE +  + +GS RVNLNYYP+CPNP+ TVGVGRHS
Sbjct:   177 YINKSKKMVRRLLEYLGKNLNVKELDETKESLFMGSIRVNLNYYPICPNPDLTVGVGRHS 236

Query:   134 DISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVI 193
             D+S+ TILLQD IGGLHVR      W+HV  ++ SF+INI D +QI+S G +KS+E+ V+
Sbjct:   237 DVSSLTILLQDQIGGLHVRSLASGNWVHVPPVAGSFVINIGDAMQIMSNGLYKSVEHRVL 296

Query:   194 ANGSQNMILVLLFVNPKPEGILCPFPEVLANGKKPLYKPVL 234
             ANG  N I V +FVNPKPE ++ P PEV+ANG++P+Y+ VL
Sbjct:   297 ANGYNNRISVPIFVNPKPESVIGPLPEVIANGEEPIYRDVL 337
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS
GO:0019748 "secondary metabolic process" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0010421 "hydrogen peroxide-mediated programmed cell death" evidence=IMP
GO:0009805 "coumarin biosynthetic process" evidence=RCA;IMP
GO:0051213 "dioxygenase activity" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009611 "response to wounding" evidence=RCA
GO:0010583 "response to cyclopentenone" evidence=RCA
TAIR|locus:2035671 AT1G55290 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2090359 AT3G12900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:505006595 AT5G12270 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2042942 AT2G38240 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127691 AT4G10500 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052781 AT2G30830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127686 AT4G10490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2020798 2A6 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052796 AT2G30840 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
grail3.0116007201
hypothetical protein (358 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query234
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 8e-30
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 5e-29
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 3e-28
PLN02947374 PLN02947, PLN02947, oxidoreductase 9e-27
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 2e-25
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 3e-25
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 4e-25
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-23
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 3e-22
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 3e-22
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 7e-22
PLN02216357 PLN02216, PLN02216, protein SRG1 2e-21
PLN02704335 PLN02704, PLN02704, flavonol synthase 3e-19
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-19
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 3e-18
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-17
PLN02904357 PLN02904, PLN02904, oxidoreductase 2e-16
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 3e-16
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 1e-13
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 4e-13
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 2e-12
PLN02997325 PLN02997, PLN02997, flavonol synthase 6e-11
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 3e-10
PLN02485329 PLN02485, PLN02485, oxidoreductase 5e-09
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 1e-07
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 2e-04
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information 
 Score =  113 bits (283), Expect = 8e-30
 Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 18/212 (8%)

Query: 25  SKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFWPSV---CKD 81
           S+  + YS +       R  +SF +  E+   W+DFL +     E+    WPS     ++
Sbjct: 100 SERVKHYSAD--TKKTTRLSTSFNVSKEKVSNWRDFLRLHCYPIEDFIEEWPSTPISFRE 157

Query: 82  EMLEYTKSSEGLNVKRIDEIRALMLLGSRRVN-----------LNYYPMCPNPEHTVGVG 130
              EY  S   L +  ++ I   + L   RV+           +NYYP CP PE T G+ 
Sbjct: 158 VTAEYATSVRALVLTLLEAISESLGLEKDRVSNTLGKHGQHMAINYYPPCPQPELTYGLP 217

Query: 131 RHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEY 190
            H D +  T+LLQD++ GL V KD    WI V+ I  +FI+N+ D +Q+IS  ++KS+ +
Sbjct: 218 GHKDANLITVLLQDEVSGLQVFKD--GKWIAVNPIPNTFIVNLGDQMQVISNDKYKSVLH 275

Query: 191 CVIANGSQNMILVLLFVNPKPEGILCPFPEVL 222
             + N  +  I +  F  P  + ++ P  E++
Sbjct: 276 RAVVNTDKERISIPTFYCPSEDAVIGPAQELI 307

Length = 348
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 234
PLN02216357 protein SRG1 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02276361 gibberellin 20-oxidase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02947374 oxidoreductase 100.0
PLN02997325 flavonol synthase 100.0
PLN02704335 flavonol synthase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02904357 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02485329 oxidoreductase 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.94
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.39
PLN03176120 flavanone-3-hydroxylase; Provisional 98.36
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 97.12
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 95.24
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 94.72
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 92.79
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 84.24
>PLN02216 protein SRG1 Back     alignment and domain information 
Probab=100.00  E-value=6.6e-65  Score=448.59  Aligned_cols=228  Identities=25%  Similarity=0.478  Sum_probs=205.0

Q ss_pred             cccccCCChhhHH---HHHHHHhcCCHHHHhccccCCCCCCcccCccCcccCcccCCCceeeeccccccch-hhhcCCCh
Q 046644            2 LETQEGVSRRIYP---FRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEE-EIAAFWPS   77 (234)
Q Consensus         2 ~~~nhGi~~~~~~---~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~-~~~~~wP~   77 (234)
                      .++||||++++++   +++++||+||.|+|+++....  ...+||+........+..||+|.|.+...|.. ..+|.||+
T Consensus        85 ~v~nHGI~~~li~~~~~~~~~FF~LP~eeK~k~~~~~--~~~~Gy~~~~~~~~~~~~d~~e~~~~~~~p~~~~~~~~WP~  162 (357)
T PLN02216         85 QLVNHGIDSSFLDKVKSEIQDFFNLPMEEKKKLWQRP--GEIEGFGQAFVVSEDQKLDWADMFFLTMQPVRLRKPHLFPK  162 (357)
T ss_pred             EEECCCCCHHHHHHHHHHHHHHHcCCHHHHHhhhcCC--CCccccCccccccccccCCceeeeeeeccCcccccchhccc
Confidence            5899999999998   467899999999999997642  45789976543334567899999988765543 56789997


Q ss_pred             ---HHHHHHHHHHHH------------hhcCCCCchhhHHHHhhc-CcceeEEeecCCCCCCCCcccccCCCCCCCeEEE
Q 046644           78 ---VCKDEMLEYTKS------------SEGLNVKRIDEIRALMLL-GSRRVNLNYYPMCPNPEHTVGVGRHSDISTFTIL  141 (234)
Q Consensus        78 ---~f~~~~~~y~~~------------a~~Lgl~~~~~~~~~~~~-~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lTlL  141 (234)
                         .||+++++|+++            |++|||+ +++|.+.+.+ ..+.||++|||||+.++..+|+++|||+|+||||
T Consensus       163 ~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~~~lRl~~YPp~p~~~~~~G~~~HtD~g~lTlL  241 (357)
T PLN02216        163 LPLPFRDTLETYSAEVKSIAKILFAKMASALEIK-PEEMEKLFDDDLGQSIRMNYYPPCPQPDQVIGLTPHSDAVGLTIL  241 (357)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHHHHhccCchheeEEeecCCCCCcccccCccCcccCceEEEE
Confidence               899999999998            9999999 9999998876 4578999999999998889999999999999999


Q ss_pred             ee-CCCCceEEEeCCCCceEEEeecCCeEEEEecchhhhhhCCceecccceeecCCCCCeeEEEeeecCCCCceEecCcc
Q 046644          142 LQ-DDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGILCPFPE  220 (234)
Q Consensus       142 ~q-d~~~GLqV~~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i~p~~~  220 (234)
                      +| ++++||||+++|  +|++|+|+||++||||||+||+||||+|||++|||+.++.++|||++||++|+.|++|.|+++
T Consensus       242 ~q~~~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~d~~i~p~~~  319 (357)
T PLN02216        242 LQVNEVEGLQIKKDG--KWVSVKPLPNALVVNVGDILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGMGKEIGPAKS  319 (357)
T ss_pred             EecCCCCceeEEECC--EEEECCCCCCeEEEEcchhhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCCCCeEeCcHH
Confidence            99 469999999999  999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             ccCCCCCCCCCCCC
Q 046644          221 VLANGKKPLYKPVL  234 (234)
Q Consensus       221 ~~~~~~p~~y~~~~  234 (234)
                      |+++++|++|++++
T Consensus       320 lv~~~~p~~Y~~~t  333 (357)
T PLN02216        320 LVERQKAALFKSLT  333 (357)
T ss_pred             HcCCCCCCCCCCcC
Confidence            99999999999986

>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query234
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 9e-19
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 1e-18
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 2e-18
1w9y_A319 The Structure Of Acc Oxidase Length = 319 7e-13
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 6e-05
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 1e-04
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure 
Iteration: 1

 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 29/221 (13%)
Query: 26  KEKRKYSKENSPTNNARFGSSFVLHAERALEWKD-FLSMFYVSEEEIAAFWPSVCKD--- 81
           +EK KY+ + +      +GS    +A   LEW+D F  + Y  E+   + WP    D   
Sbjct: 108 EEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIE 167
Query: 82  EMLEYTKS------------SEGLNV------KRIDEIRALMLLGSRRVNLNYYPMCPNP 123
              EY K             S GL +      K +  +  L+L    ++ +NYYP CP P
Sbjct: 168 ATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLL----QMKINYYPKCPQP 223
Query: 124 EHTVGVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKG 183
           E  +GV  H+D+S  T +L + + GL +  +    W+    +  S +++I D L+I+S G
Sbjct: 224 ELALGVEAHTDVSALTFILHNMVPGLQLFYE--GKWVTAKCVPDSIVMHIGDTLEILSNG 281
Query: 184 RHKSIEYCVIANGSQNMILVLLFVN-PKPEGILCPFPEVLA 223
           ++KSI +  + N  +  I   +F   PK + +L P PE+++
Sbjct: 282 KYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVS 322
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query234
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-59
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-49
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 2e-26
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 4e-26
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 3e-25
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 2e-21
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  190 bits (486), Expect = 1e-59
 Identities = 59/226 (26%), Positives = 105/226 (46%), Gaps = 21/226 (9%)

Query: 27  EKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMF-YVSEEEIAAFWP---SVCKDE 82
           EK KY+ + +      +GS    +A   LEW+D+     Y  E+   + WP   S   + 
Sbjct: 109 EKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIEA 168

Query: 83  MLEYTKS------------SEGLNVKR--IDEIRALMLLGSRRVNLNYYPMCPNPEHTVG 128
             EY K             S GL ++   +++    +     ++ +NYYP CP PE  +G
Sbjct: 169 TSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALG 228

Query: 129 VGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSI 188
           V  H+D+S  T +L + + GL +  +    W+    +  S +++I D L+I+S G++KSI
Sbjct: 229 VEAHTDVSALTFILHNMVPGLQLFYE--GKWVTAKCVPDSIVMHIGDTLEILSNGKYKSI 286

Query: 189 EYCVIANGSQNMILVLLFVNPKPEG-ILCPFPEVLANGKKPLYKPV 233
            +  + N  +  I   +F  P  +  +L P PE+++      + P 
Sbjct: 287 LHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPR 332
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query234
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 93.01
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 92.24
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 91.54
2iuw_A238 Alkylated repair protein ALKB homolog 3; oxidoredu 88.23
3s57_A204 Alpha-ketoglutarate-dependent dioxygenase ALKB HO; 84.35
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 82.73
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
Probab=100.00  E-value=8.2e-65  Score=447.71  Aligned_cols=230  Identities=26%  Similarity=0.467  Sum_probs=209.0

Q ss_pred             cccccCCChhhHH---HHHHHHhcCCHHHHhccccCCCCCCcccCccCcccCcccCCCceeeeccccccch-hhhcCCCh
Q 046644            2 LETQEGVSRRIYP---FRYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEE-EIAAFWPS   77 (234)
Q Consensus         2 ~~~nhGi~~~~~~---~~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~-~~~~~wP~   77 (234)
                      .++||||++++++   +++++||+||.|+|+++........++||+........+..||+|.|+++..|.. ...|.||+
T Consensus        81 ~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~  160 (356)
T 1gp6_A           81 HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK  160 (356)
T ss_dssp             EEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCC
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCC
Confidence            5799999999998   4678999999999999987532135889987655555678899999999876653 46789998


Q ss_pred             ---HHHHHHHHHHHH------------hhcCCCCchhhHHHHhh---cCcceeEEeecCCCCCCCCcccccCCCCCCCeE
Q 046644           78 ---VCKDEMLEYTKS------------SEGLNVKRIDEIRALML---LGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFT  139 (234)
Q Consensus        78 ---~f~~~~~~y~~~------------a~~Lgl~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lT  139 (234)
                         +||+++++|+++            |++|||+ +++|.+.+.   .+.+.||++|||||+.++..+|+++|||+|+||
T Consensus       161 ~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~-~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lT  239 (356)
T 1gp6_A          161 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLE-PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT  239 (356)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCC-HHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEE
Confidence               999999999998            9999999 999999987   478899999999999988899999999999999


Q ss_pred             EEeeCCCCceEEEeCCCCceEEEeecCCeEEEEecchhhhhhCCceecccceeecCCCCCeeEEEeeecCCCCc-eEecC
Q 046644          140 ILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEG-ILCPF  218 (234)
Q Consensus       140 lL~qd~~~GLqV~~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~-~i~p~  218 (234)
                      ||+||+++||||+++|  +|++|+|+||++||||||+||+||||+||||+|||+.++.++|||++||++|+.|+ +|.|+
T Consensus       240 lL~qd~v~GLQV~~~g--~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl  317 (356)
T 1gp6_A          240 FILHNMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL  317 (356)
T ss_dssp             EEEECSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred             EEEEcCCCCeEEecCC--cEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCC
Confidence            9999999999999999  99999999999999999999999999999999999998888999999999999999 99999


Q ss_pred             ccccCCCCCCCCCCCC
Q 046644          219 PEVLANGKKPLYKPVL  234 (234)
Q Consensus       219 ~~~~~~~~p~~y~~~~  234 (234)
                      ++|+++++|++|+++|
T Consensus       318 ~~~~~~~~p~~y~~~t  333 (356)
T 1gp6_A          318 PEMVSVESPAKFPPRT  333 (356)
T ss_dssp             GGGCCSSSCCSSCCEE
T ss_pred             hhhcCCCCCccCCCcc
Confidence            9999999999999875
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10 Back     alignment and structure
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A* Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 234
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 3e-20
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 9e-17
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 4e-10
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 85.8 bits (211), Expect = 3e-20
 Identities = 58/227 (25%), Positives = 102/227 (44%), Gaps = 21/227 (9%)

Query: 26  KEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEEEIAAFW----PSVCKD 81
           +EK KY+ + +      +GS    +A   LEW+D+       EE+         PS   +
Sbjct: 107 EEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSDYIE 166

Query: 82  EMLEYTKSSE--------------GLNVKRIDEIRALMLLGSRRVNLNYYPMCPNPEHTV 127
              EY K                 GL   R+++    +     ++ +NYYP CP PE  +
Sbjct: 167 ATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELAL 226

Query: 128 GVGRHSDISTFTILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKS 187
           GV  H+D+S  T +L + + GL +  +    W+    +  S +++I D L+I+S G++KS
Sbjct: 227 GVEAHTDVSALTFILHNMVPGLQLFYEGK--WVTAKCVPDSIVMHIGDTLEILSNGKYKS 284

Query: 188 IEYCVIANGSQNMILVLLFVNPKPEG-ILCPFPEVLANGKKPLYKPV 233
           I +  + N  +  I   +F  P  +  +L P PE+++      + P 
Sbjct: 285 ILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPR 331
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query234
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 93.12
d2fdia1200 Alkylated DNA repair protein AlkB {Escherichia col 81.88
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=3.9e-60  Score=414.53  Aligned_cols=230  Identities=26%  Similarity=0.466  Sum_probs=199.6

Q ss_pred             cccccCCChhhHHH---HHHHHhcCCHHHHhccccCCCCCCcccCccCcccCcccCCCceeeeccccccch-hhhcCCCh
Q 046644            2 LETQEGVSRRIYPF---RYVAYAGEWSKEKRKYSKENSPTNNARFGSSFVLHAERALEWKDFLSMFYVSEE-EIAAFWPS   77 (234)
Q Consensus         2 ~~~nhGi~~~~~~~---~~~~fF~lP~e~K~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~-~~~~~wP~   77 (234)
                      .++||||+.+++++   ++++||+||.|+|+++......+.+.||+........+..+|.+.+.....+.. ...|.||+
T Consensus        80 ~l~nHGI~~~li~~~~~~~~~FF~lP~eeK~k~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~wp~  159 (349)
T d1gp6a_          80 HLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPK  159 (349)
T ss_dssp             EEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCC
T ss_pred             EEEccCCCHHHHHHHHHHHHHHHcCCHHHHhhhhcccccCCccccccccccccccccchhhhhccccccccccccccccc
Confidence            57999999999994   678999999999999987543234556655444445666777776554333333 56789997


Q ss_pred             ---HHHHHHHHHHHH------------hhcCCCCchhhHHHHhh---cCcceeEEeecCCCCCCCCcccccCCCCCCCeE
Q 046644           78 ---VCKDEMLEYTKS------------SEGLNVKRIDEIRALML---LGSRRVNLNYYPMCPNPEHTVGVGRHSDISTFT  139 (234)
Q Consensus        78 ---~f~~~~~~y~~~------------a~~Lgl~~~~~~~~~~~---~~~~~lr~~~Yp~~~~~~~~~g~~~HtD~g~lT  139 (234)
                         .|++.+++|+++            |++||++ +++|.+.+.   ...+.+|++|||+++.++..+|+++|||+|+||
T Consensus       160 ~~~~f~e~~~~~~~~~~~la~~ll~~la~~Lgl~-~~~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~g~~~HtD~g~lT  238 (349)
T d1gp6a_         160 TPSDYIEATSEYAKCLRLLATKVFKALSVGLGLE-PDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALT  238 (349)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-TTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEE
T ss_pred             ccchHHHHHHHHHHHHHHHHHhhhHHHHHHcCCC-HHHHHHHhccccccceeeeecccccccchhhccccccCCCCcceE
Confidence               899999999887            8999999 899998774   366789999999999988899999999999999


Q ss_pred             EEeeCCCCceEEEeCCCCceEEEeecCCeEEEEecchhhhhhCCceecccceeecCCCCCeeEEEeeecCCCCceE-ecC
Q 046644          140 ILLQDDIGGLHVRKDNGNGWIHVSLISRSFIINIWDPLQIISKGRHKSIEYCVIANGSQNMILVLLFVNPKPEGIL-CPF  218 (234)
Q Consensus       140 lL~qd~~~GLqV~~~g~~~W~~V~p~pg~~vVnvGd~l~~~SnG~~~s~~HRV~~~~~~~R~Si~~F~~P~~d~~i-~p~  218 (234)
                      ||+|+.++||||.++|  +|++|+|.+|++|||+||+||+||||+|+||+|||+.+++++|||++||++|+.|++| .|+
T Consensus       239 lL~q~~~~GLqv~~~g--~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~d~~i~~pl  316 (349)
T d1gp6a_         239 FILHNMVPGLQLFYEG--KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL  316 (349)
T ss_dssp             EEEECSCCCEEEEETT--EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred             EEeccCCcceeeecCC--ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEEecCCCcceeecCC
Confidence            9999999999999999  9999999999999999999999999999999999999988999999999999999865 899


Q ss_pred             ccccCCCCCCCCCCCC
Q 046644          219 PEVLANGKKPLYKPVL  234 (234)
Q Consensus       219 ~~~~~~~~p~~y~~~~  234 (234)
                      ++|+++++|++|++||
T Consensus       317 ~~~v~~~~p~~y~~~t  332 (349)
T d1gp6a_         317 PEMVSVESPAKFPPRT  332 (349)
T ss_dssp             GGGCCSSSCCSSCCEE
T ss_pred             HHHcCCCCCCCCCCcc
Confidence            9999999999999975
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure