Citrus Sinensis ID: 046667

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540
MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGKSLEEMSGENQDEGAQDMERDPSSNNSRTVPV
cccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHccccccccccccccccccccccccc
ccHHHHHHHHHHHcccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHcEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccccccHHHHHHHHHHccHEHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHcccccHEEEHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHccccccccHEHHHHHHHHHHHHHcccccEEEEEEccccccHHcccHHHHHHHHcHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHcccccccccccccccccccccccccc
MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYyhvdgaekpgslppnvsaavngVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIasglsfgnspkgVMATLCFFRFWlgfgiggdyplsATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFnaafkapayeddpiastapqadYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDrdkgngyglfSKEFLRRHglhllgttstWFLLDIAFYSQnlfqkdifsavgwipsakTMNAIQEVYKIARAQTLIALCstvpgywfTVAFIDKIGRFAIQMMGFFFMTVFMFALAipydhwthksnrlGFVIIYSLTFFfanfgpnattfvvpaeifparlrstchgisaaSGKLGAIVGAFGFLYLAqskdktktdagyppgigvknSLIVLGVVNLLGLLFTflvpeskgksleemsgenqdegaqdmerdpssnnsrtvpv
MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIqeldrdkgnGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGKSLEEMSGEnqdegaqdmerdpssnnsrtvpv
MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQmmgfffmtvfmfALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSlivlgvvnllgllftflvPESKGKSLEEMSGENQDEGAQDMERDPSSNNSRTVPV
******EVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAK*******************************GNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLV*************************************
***********LDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYT*****************************************LFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGKS******************************
MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVA***********KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKG********************************
*GKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGK*******************************
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iiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMxxxxxxxxxxxxxxxxxxxxxKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGLLFTFLVPESKGKSLEEMSGENQDEGAQDMERDPSSNNSRTVPV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query540 2.2.26 [Sep-21-2011]
Q96303534 Inorganic phosphate trans yes no 0.955 0.966 0.864 0.0
Q494P0535 Probable inorganic phosph no no 0.957 0.966 0.871 0.0
Q8GYF4542 Probable inorganic phosph no no 1.0 0.996 0.776 0.0
O48639521 Probable inorganic phosph no no 0.959 0.994 0.813 0.0
Q8VYM2524 Inorganic phosphate trans no no 0.959 0.988 0.795 0.0
Q01MW8538 Probable inorganic phosph N/A no 0.985 0.988 0.753 0.0
Q8H6H2538 Probable inorganic phosph yes no 0.985 0.988 0.75 0.0
Q8H6H0534 Inorganic phosphate trans no no 0.957 0.968 0.763 0.0
Q96243524 Probable inorganic phosph no no 0.959 0.988 0.795 0.0
Q8H074541 Probable inorganic phosph no no 0.979 0.977 0.751 0.0
>sp|Q96303|PHT14_ARATH Inorganic phosphate transporter 1-4 OS=Arabidopsis thaliana GN=PHT1-4 PE=1 SV=1 Back     alignment and function desciption
 Score =  944 bits (2439), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/516 (86%), Positives = 488/516 (94%)

Query: 1   MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAE 60
           M + QL+VLNALDVAKTQWYHFTAII+AGMGFFTDAYDLFCISLVTKLLGRIYYHV+GA+
Sbjct: 1   MAREQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGAQ 60

Query: 61  KPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFG 120
           KPG+LPPNV+AAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLM+MV+CSIASGLSFG
Sbjct: 61  KPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMVMVLCSIASGLSFG 120

Query: 121 NSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180
           + PK VMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF++AVFAMQGFGI+AGG
Sbjct: 121 HEPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFVSAVFAMQGFGIMAGG 180

Query: 181 IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETA 240
           IFA+I+SSAF A F +PAY DD + ST PQAD +WRII+M GA+PAA+TYY R KMPETA
Sbjct: 181 IFAIIISSAFEAKFPSPAYADDALGSTIPQADLVWRIILMAGAIPAAMTYYSRSKMPETA 240

Query: 241 RYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLG 300
           RYTALVAK+AKQAASDMSKVLQVE+E E+QK++E+ ++K   +GLFSKEF+ RHGLHLLG
Sbjct: 241 RYTALVAKDAKQAASDMSKVLQVEIEPEQQKLEEISKEKSKAFGLFSKEFMSRHGLHLLG 300

Query: 301 TTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGY 360
           TTSTWFLLDIAFYSQNLFQKDIFSA+GWIP A++MNAIQEV+KIARAQTLIALCSTVPGY
Sbjct: 301 TTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQSMNAIQEVFKIARAQTLIALCSTVPGY 360

Query: 361 WFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFG 420
           WFTVAFID IGRFAIQMMGFFFMTVFMFALAIPY+HWTHK NR+GFVI+YSLTFFFANFG
Sbjct: 361 WFTVAFIDVIGRFAIQMMGFFFMTVFMFALAIPYNHWTHKENRIGFVIMYSLTFFFANFG 420

Query: 421 PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGI 480
           PNATTFVVPAEIFPAR RSTCHGISAASGKLGA+VGAFGFLYLAQ+ DK KTDAGYPPGI
Sbjct: 421 PNATTFVVPAEIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQNPDKDKTDAGYPPGI 480

Query: 481 GVKNSLIVLGVVNLLGLLFTFLVPESKGKSLEEMSG 516
           GV+NSLIVLGVVN LG+LFTFLVPESKGKSLEEMSG
Sbjct: 481 GVRNSLIVLGVVNFLGILFTFLVPESKGKSLEEMSG 516
High-affinity transporter for external inorganic phosphate. Acts as a H(+):phosphate symporter in both low- and high-Pi conditions. Confers sensitivity to arsenate.
Arabidopsis thaliana (taxid: 3702)
>sp|Q494P0|PHT17_ARATH Probable inorganic phosphate transporter 1-7 OS=Arabidopsis thaliana GN=PHT1-7 PE=2 SV=2 Back     alignment and function description
>sp|Q8GYF4|PHT15_ARATH Probable inorganic phosphate transporter 1-5 OS=Arabidopsis thaliana GN=PHT1-5 PE=2 SV=2 Back     alignment and function description
>sp|O48639|PHT13_ARATH Probable inorganic phosphate transporter 1-3 OS=Arabidopsis thaliana GN=PHT1-3 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYM2|PHT11_ARATH Inorganic phosphate transporter 1-1 OS=Arabidopsis thaliana GN=PHT1-1 PE=1 SV=2 Back     alignment and function description
>sp|Q01MW8|PHT14_ORYSI Probable inorganic phosphate transporter 1-4 OS=Oryza sativa subsp. indica GN=PHT1-4 PE=2 SV=2 Back     alignment and function description
>sp|Q8H6H2|PHT14_ORYSJ Probable inorganic phosphate transporter 1-4 OS=Oryza sativa subsp. japonica GN=PHT1-4 PE=2 SV=1 Back     alignment and function description
>sp|Q8H6H0|PHT16_ORYSJ Inorganic phosphate transporter 1-6 OS=Oryza sativa subsp. japonica GN=PHT1-6 PE=1 SV=1 Back     alignment and function description
>sp|Q96243|PHT12_ARATH Probable inorganic phosphate transporter 1-2 OS=Arabidopsis thaliana GN=PHT1-2 PE=1 SV=2 Back     alignment and function description
>sp|Q8H074|PT112_ORYSJ Probable inorganic phosphate transporter 1-12 OS=Oryza sativa subsp. japonica GN=PHT1-12 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query540
425872908540 phosphate transporter [Citrus trifoliata 1.0 1.0 0.988 0.0
302353424536 phosphate transporter 1 [Hevea brasilien 0.987 0.994 0.871 0.0
255567282536 inorganic phosphate transporter, putativ 0.992 1.0 0.868 0.0
224082802539 high affinity inorganic phosphate transp 0.988 0.990 0.859 0.0
297823783534 hypothetical protein ARALYDRAFT_482913 [ 0.987 0.998 0.848 0.0
224082800539 high affinity inorganic phosphate transp 0.988 0.990 0.860 0.0
265144456539 phosphate transporter1-7 [Glycine max] 0.990 0.992 0.853 0.0
356505011539 PREDICTED: probable inorganic phosphate 0.990 0.992 0.855 0.0
392583890539 probable inorganic phosphate transporter 0.990 0.992 0.853 0.0
407911912539 phosphate transporter 5 [Astragalus sini 0.990 0.992 0.846 0.0
>gi|425872908|gb|AFY06658.1| phosphate transporter [Citrus trifoliata] Back     alignment and taxonomy information
 Score = 1097 bits (2838), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 534/540 (98%), Positives = 537/540 (99%)

Query: 1   MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAE 60
           MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAE
Sbjct: 1   MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAE 60

Query: 61  KPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFG 120
           KPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFG
Sbjct: 61  KPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFG 120

Query: 121 NSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180
           NSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG
Sbjct: 121 NSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180

Query: 181 IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETA 240
           IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETA
Sbjct: 181 IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETA 240

Query: 241 RYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLG 300
           RYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLG
Sbjct: 241 RYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLG 300

Query: 301 TTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGY 360
           TTSTWFLLDIAFYSQNLFQKDIFSAVGWIP AKTMNAI EVYKIARAQTLIALCSTVPGY
Sbjct: 301 TTSTWFLLDIAFYSQNLFQKDIFSAVGWIPPAKTMNAIHEVYKIARAQTLIALCSTVPGY 360

Query: 361 WFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFG 420
           WFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVI+YSLTFFFANFG
Sbjct: 361 WFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIMYSLTFFFANFG 420

Query: 421 PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGI 480
           PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQ+KDKTKTDAGYPPGI
Sbjct: 421 PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQNKDKTKTDAGYPPGI 480

Query: 481 GVKNSLIVLGVVNLLGLLFTFLVPESKGKSLEEMSGENQDEGAQDMERDPSSNNSRTVPV 540
           GVKNSLIVLG VNLLGLLFTFLVPESKGKSLEEMSGENQDEGAQDMER+PSSNNSRTVPV
Sbjct: 481 GVKNSLIVLGFVNLLGLLFTFLVPESKGKSLEEMSGENQDEGAQDMERNPSSNNSRTVPV 540

Source: Citrus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|302353424|gb|ADL27918.1| phosphate transporter 1 [Hevea brasiliensis] Back     alignment and taxonomy information
>gi|255567282|ref|XP_002524622.1| inorganic phosphate transporter, putative [Ricinus communis] gi|223536175|gb|EEF37830.1| inorganic phosphate transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224082802|ref|XP_002306845.1| high affinity inorganic phosphate transporter [Populus trichocarpa] gi|222856294|gb|EEE93841.1| high affinity inorganic phosphate transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297823783|ref|XP_002879774.1| hypothetical protein ARALYDRAFT_482913 [Arabidopsis lyrata subsp. lyrata] gi|297325613|gb|EFH56033.1| hypothetical protein ARALYDRAFT_482913 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224082800|ref|XP_002306844.1| high affinity inorganic phosphate transporter [Populus trichocarpa] gi|222856293|gb|EEE93840.1| high affinity inorganic phosphate transporter [Populus trichocarpa] Back     alignment and taxonomy information
>gi|265144456|gb|ACY74618.1| phosphate transporter1-7 [Glycine max] Back     alignment and taxonomy information
>gi|356505011|ref|XP_003521286.1| PREDICTED: probable inorganic phosphate transporter 1-7-like [Glycine max] gi|227121304|gb|ACP19342.1| phosphate transporter 2 [Glycine max] Back     alignment and taxonomy information
>gi|392583890|ref|NP_001254802.1| probable inorganic phosphate transporter 1-7-like [Glycine max] gi|389828590|gb|AFL02621.1| soybean phosphate transporter protein 11 [Glycine max] Back     alignment and taxonomy information
>gi|407911912|gb|AFU50504.1| phosphate transporter 5 [Astragalus sinicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query540
TAIR|locus:2064895534 PHT1;4 "phosphate transporter 0.987 0.998 0.792 2.4e-234
TAIR|locus:2102450535 PHT1;7 "AT3G54700" [Arabidopsi 0.983 0.992 0.803 1.1e-231
TAIR|locus:2046432542 PHT1;5 "phosphate transporter 1.0 0.996 0.743 9.1e-219
TAIR|locus:2176471521 PHT1;3 "phosphate transporter 0.955 0.990 0.771 2.8e-215
TAIR|locus:2176481524 PHT1;2 "phosphate transporter 0.955 0.984 0.754 7e-212
TAIR|locus:2176461524 PHT1;1 "AT5G43350" [Arabidopsi 0.955 0.984 0.756 8.9e-212
TAIR|locus:2176451516 PHT1;6 "phosphate transporter 0.931 0.974 0.665 6.6e-184
TAIR|locus:2011681532 PHT1;9 "AT1G76430" [Arabidopsi 0.925 0.939 0.475 1.7e-121
TAIR|locus:2037390534 PHT1;8 "phosphate transporter 0.948 0.958 0.476 3.6e-121
TAIR|locus:504955256280 AT4G08878 "AT4G08878" [Arabido 0.437 0.842 0.737 9.3e-91
TAIR|locus:2064895 PHT1;4 "phosphate transporter 1;4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2260 (800.6 bits), Expect = 2.4e-234, P = 2.4e-234
 Identities = 428/540 (79%), Positives = 474/540 (87%)

Query:     1 MGKGQLEVLNALDVAKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAE 60
             M + QL+VLNALDVAKTQWYHFTAII+AGMGFFTDAYDLFCISLVTKLLGRIYYHV+GA+
Sbjct:     1 MAREQLQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGAQ 60

Query:    61 KPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFG 120
             KPG+LPPNV+AAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLM+MV+CSIASGLSFG
Sbjct:    61 KPGTLPPNVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMVMVLCSIASGLSFG 120

Query:   121 NSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180
             + PK VMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF++AVFAMQGFGI+AGG
Sbjct:   121 HEPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFVSAVFAMQGFGIMAGG 180

Query:   181 IFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETA 240
             IFA+I+SSAF A F +PAY DD + ST PQAD +WRII+M GA+PAA+TYY R KMPETA
Sbjct:   181 IFAIIISSAFEAKFPSPAYADDALGSTIPQADLVWRIILMAGAIPAAMTYYSRSKMPETA 240

Query:   241 RYTALVAKNAKQAASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLG 300
             RYTALVAK+AKQAASDMSKVLQVE+E E+QK++E+ ++K   +GLFSKEF+ RHGLHLLG
Sbjct:   241 RYTALVAKDAKQAASDMSKVLQVEIEPEQQKLEEISKEKSKAFGLFSKEFMSRHGLHLLG 300

Query:   301 TTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGY 360
             TTSTWFLLDIAFYSQNLFQKDIFSA+GWIP A++MNAIQEV+KIARAQTLIALCSTVPGY
Sbjct:   301 TTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQSMNAIQEVFKIARAQTLIALCSTVPGY 360

Query:   361 WFTVAFIDKIGRFAIQXXXXXXXXXXXXALAIPYDHWTHKSNRLGFVIIYSLTFFFANFG 420
             WFTVAFID IGRFAIQ            ALAIPY+HWTHK NR+GFVI+YSLTFFFANFG
Sbjct:   361 WFTVAFIDVIGRFAIQMMGFFFMTVFMFALAIPYNHWTHKENRIGFVIMYSLTFFFANFG 420

Query:   421 PNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGI 480
             PNATTFVVPAEIFPAR RSTCHGISAASGKLGA+VGAFGFLYLAQ+ DK KTDAGYPPGI
Sbjct:   421 PNATTFVVPAEIFPARFRSTCHGISAASGKLGAMVGAFGFLYLAQNPDKDKTDAGYPPGI 480

Query:   481 GVKNSXXXXXXXXXXXXXXXXXXPESKGKSLEEMSGENQDEGAQDMERDPSSNNSRTVPV 540
             GV+NS                  PESKGKSLEEMSGEN+D        + S+N+SRTVP+
Sbjct:   481 GVRNSLIVLGVVNFLGILFTFLVPESKGKSLEEMSGENEDN-------ENSNNDSRTVPI 533
GO:0005315 "inorganic phosphate transmembrane transporter activity" evidence=IEA;ISS
GO:0005351 "sugar:hydrogen symporter activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0006817 "phosphate ion transport" evidence=IEA
GO:0015114 "phosphate ion transmembrane transporter activity" evidence=ISS
GO:0015144 "carbohydrate transmembrane transporter activity" evidence=ISS
GO:0016020 "membrane" evidence=ISS;IDA
GO:0016021 "integral to membrane" evidence=IEA
GO:0022857 "transmembrane transporter activity" evidence=IEA
GO:0055085 "transmembrane transport" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0005634 "nucleus" evidence=IDA
GO:0009737 "response to abscisic acid stimulus" evidence=IDA
GO:0009506 "plasmodesma" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006857 "oligopeptide transport" evidence=RCA
TAIR|locus:2102450 PHT1;7 "AT3G54700" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2046432 PHT1;5 "phosphate transporter 1;5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176471 PHT1;3 "phosphate transporter 1;3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176481 PHT1;2 "phosphate transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176461 PHT1;1 "AT5G43350" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176451 PHT1;6 "phosphate transporter 1;6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011681 PHT1;9 "AT1G76430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2037390 PHT1;8 "phosphate transporter 1;8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:504955256 AT4G08878 "AT4G08878" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O48639PHT13_ARATHNo assigned EC number0.81310.95920.9942nono
Q96243PHT12_ARATHNo assigned EC number0.79570.95920.9885nono
Q7X7V2PHT15_ORYSJNo assigned EC number0.73110.97590.9616nono
Q8VYM2PHT11_ARATHNo assigned EC number0.79570.95920.9885nono
Q8H074PT112_ORYSJNo assigned EC number0.75180.97960.9778nono
Q494P0PHT17_ARATHNo assigned EC number0.87140.95740.9663nono
Q96303PHT14_ARATHNo assigned EC number0.86430.95550.9662yesno
Q8GSD9PHT12_ORYSJNo assigned EC number0.73950.96660.9886nono
Q01MW8PHT14_ORYSINo assigned EC number0.75370.98510.9888N/Ano
P25297PHO84_YEASTNo assigned EC number0.35210.92960.8551yesno
Q8H6G8PHT18_ORYSJNo assigned EC number0.77450.95740.9556nono
Q8H6G9PHT17_ORYSJNo assigned EC number0.75280.96110.9866nono
Q8GYF4PHT15_ARATHNo assigned EC number0.77671.00.9963nono
Q7XDZ7PHT13_ORYSJNo assigned EC number0.73570.96480.9904nono
O42885YBN1_SCHPONo assigned EC number0.33450.85550.8076yesno
Q8H6H2PHT14_ORYSJNo assigned EC number0.750.98510.9888yesno
Q8H6H0PHT16_ORYSJNo assigned EC number0.76320.95740.9681nono
Q8H6H4PHT11_ORYSJNo assigned EC number0.73260.95740.9810nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
PtrPHT1-7
high affinity inorganic phosphate transporter (539 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.X.1304.1
hypothetical protein (502 aa)
  •     0.422
gw1.164.27.1
hypothetical protein (492 aa)
  •     0.422

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query540
TIGR00887502 TIGR00887, 2A0109, phosphate:H+ symporter 0.0
pfam00083449 pfam00083, Sugar_tr, Sugar (and other) transporter 1e-44
TIGR00879481 TIGR00879, SP, MFS transporter, sugar porter (SP) 3e-27
TIGR00895398 TIGR00895, 2A0115, benzoate transport 3e-23
TIGR00898505 TIGR00898, 2A0119, cation transport protein 7e-20
TIGR00883394 TIGR00883, 2A0106, metabolite-proton symporter 5e-16
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 1e-15
PRK10077479 PRK10077, xylE, D-xylose transporter XylE; Provisi 1e-12
TIGR00891405 TIGR00891, 2A0112, putative sialic acid transporte 2e-12
TIGR01299742 TIGR01299, synapt_SV2, synaptic vesicle protein SV 3e-12
PRK03893496 PRK03893, PRK03893, putative sialic acid transport 2e-11
PRK10642490 PRK10642, PRK10642, proline/glycine betaine transp 3e-11
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 8e-10
PRK12307426 PRK12307, PRK12307, putative sialic acid transport 1e-08
PRK09952438 PRK09952, PRK09952, shikimate transporter; Provisi 8e-08
PRK10406432 PRK10406, PRK10406, alpha-ketoglutarate transporte 7e-07
PRK11551406 PRK11551, PRK11551, putative 3-hydroxyphenylpropio 1e-06
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 2e-06
cd06174352 cd06174, MFS, The Major Facilitator Superfamily (M 3e-06
pfam07690346 pfam07690, MFS_1, Major Facilitator Superfamily 6e-06
pfam13347425 pfam13347, MFS_2, MFS/sugar transport protein 9e-05
TIGR00894465 TIGR00894, 2A0114euk, Na(+)-dependent inorganic ph 8e-04
COG2223417 COG2223, NarK, Nitrate/nitrite transporter [Inorga 0.001
>gnl|CDD|129965 TIGR00887, 2A0109, phosphate:H+ symporter Back     alignment and domain information 
 Score =  791 bits (2044), Expect = 0.0
 Identities = 306/514 (59%), Positives = 367/514 (71%), Gaps = 19/514 (3%)

Query: 11  ALDVAKTQ---WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPP 67
           AL+ A T    W HF AI++AG+GFFTD+YDLFCISLVTK+LG +YYH  G      LP 
Sbjct: 1   ALEEADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYHGKG-----PLPS 55

Query: 68  NVSAAVNGVAFCGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVM 127
           +VSAAVNG A  GTLAGQLFFGWL DKLGRK+VYGM L++M+I ++ASGLS G+SPK VM
Sbjct: 56  SVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVM 115

Query: 128 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVS 187
           ATLCF+RFWLG GIGGDYPLSA I SE+A KK RGA +AAVFAMQGFGILAG I ALIV 
Sbjct: 116 ATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVL 175

Query: 188 SAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVA 247
           + F  + +A A E     S  P  DY+WRI++  GA+PA L  Y+R+ +PET RYTA VA
Sbjct: 176 AGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVA 235

Query: 248 KNAKQAASDMSKVLQVELEAEEQKIQELDRDKG----NGYGLFSKEFLRRHGLHLLGTTS 303
           K+ +QAASDMS VLQV++EAE  ++++          +    F+  F  RHG HLLGT  
Sbjct: 236 KDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAG 295

Query: 304 TWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFT 363
           +WFLLDIAFY  NL QK I SA+G+ P A T NA +E+YK A    +IAL  TVPGYW T
Sbjct: 296 SWFLLDIAFYGVNLNQKVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVT 355

Query: 364 VAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNA 423
           V  +D IGR  IQ+MGFF +TV  F L   Y+H +      GF+ IY L  FFANFGPNA
Sbjct: 356 VFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLSTH----GFLAIYVLAQFFANFGPNA 411

Query: 424 TTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVK 483
           TTF+VP E+FP R RST HGISAASGK GAI+G FGFLYLAQ  D TK   GYP GI + 
Sbjct: 412 TTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTK---GYPTGIWMG 468

Query: 484 NSLIVLGVVNLLGLLFTFLVPESKGKSLEEMSGE 517
           + L +  +   LG+LFT L+PE+KGKSLEE+SGE
Sbjct: 469 HVLEIFALFMFLGILFTLLIPETKGKSLEELSGE 502

This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083) [Transport and binding proteins, Anions]. Length = 502
>gnl|CDD|215702 pfam00083, Sugar_tr, Sugar (and other) transporter Back     alignment and domain information
>gnl|CDD|233165 TIGR00879, SP, MFS transporter, sugar porter (SP) family Back     alignment and domain information
>gnl|CDD|233175 TIGR00895, 2A0115, benzoate transport Back     alignment and domain information
>gnl|CDD|233176 TIGR00898, 2A0119, cation transport protein Back     alignment and domain information
>gnl|CDD|233168 TIGR00883, 2A0106, metabolite-proton symporter Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|182225 PRK10077, xylE, D-xylose transporter XylE; Provisional Back     alignment and domain information
>gnl|CDD|233172 TIGR00891, 2A0112, putative sialic acid transporter Back     alignment and domain information
>gnl|CDD|130366 TIGR01299, synapt_SV2, synaptic vesicle protein SV2 Back     alignment and domain information
>gnl|CDD|179668 PRK03893, PRK03893, putative sialic acid transporter; Provisional Back     alignment and domain information
>gnl|CDD|182611 PRK10642, PRK10642, proline/glycine betaine transporter; Provisional Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|237051 PRK12307, PRK12307, putative sialic acid transporter; Provisional Back     alignment and domain information
>gnl|CDD|182163 PRK09952, PRK09952, shikimate transporter; Provisional Back     alignment and domain information
>gnl|CDD|182433 PRK10406, PRK10406, alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>gnl|CDD|236927 PRK11551, PRK11551, putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|119392 cd06174, MFS, The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>gnl|CDD|219516 pfam07690, MFS_1, Major Facilitator Superfamily Back     alignment and domain information
>gnl|CDD|222060 pfam13347, MFS_2, MFS/sugar transport protein Back     alignment and domain information
>gnl|CDD|129972 TIGR00894, 2A0114euk, Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>gnl|CDD|225133 COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 540
KOG0252538 consensus Inorganic phosphate transporter [Inorgan 100.0
TIGR00887502 2A0109 phosphate:H+ symporter. This model represen 100.0
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 100.0
KOG0569485 consensus Permease of the major facilitator superf 100.0
PRK10077479 xylE D-xylose transporter XylE; Provisional 100.0
COG2271448 UhpC Sugar phosphate permease [Carbohydrate transp 100.0
PRK10642490 proline/glycine betaine transporter; Provisional 100.0
TIGR02332412 HpaX 4-hydroxyphenylacetate permease. This protein 100.0
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 100.0
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 100.0
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 100.0
PRK12307426 putative sialic acid transporter; Provisional 100.0
PRK10406432 alpha-ketoglutarate transporter; Provisional 100.0
PRK11663434 regulatory protein UhpC; Provisional 100.0
PRK09952438 shikimate transporter; Provisional 100.0
TIGR00898505 2A0119 cation transport protein. 100.0
COG2814394 AraJ Arabinose efflux permease [Carbohydrate trans 100.0
TIGR00891405 2A0112 putative sialic acid transporter. 100.0
KOG0254513 consensus Predicted transporter (major facilitator 100.0
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 100.0
PRK03893496 putative sialic acid transporter; Provisional 100.0
PRK03545390 putative arabinose transporter; Provisional 100.0
PRK09705393 cynX putative cyanate transporter; Provisional 100.0
PRK15075434 citrate-proton symporter; Provisional 100.0
TIGR00903368 2A0129 major facilitator 4 family protein. This fa 100.0
TIGR00895398 2A0115 benzoate transport. 100.0
PRK11273452 glpT sn-glycerol-3-phosphate transporter; Provisio 100.0
PRK14995495 methyl viologen resistance protein SmvA; Provision 100.0
PLN00028476 nitrate transmembrane transporter; Provisional 100.0
PF00083451 Sugar_tr: Sugar (and other) transporter; InterPro: 100.0
PRK05122399 major facilitator superfamily transporter; Provisi 100.0
PRK03699394 putative transporter; Provisional 100.0
TIGR00893399 2A0114 d-galactonate transporter. 100.0
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 100.0
TIGR00894465 2A0114euk Na(+)-dependent inorganic phosphate cotr 100.0
TIGR00892455 2A0113 monocarboxylate transporter 1. 100.0
PRK10489417 enterobactin exporter EntS; Provisional 100.0
PRK10504471 putative transporter; Provisional 100.0
PRK10213394 nepI ribonucleoside transporter; Reviewed 100.0
TIGR00712438 glpT glycerol-3-phosphate transporter. This model 100.0
PRK12382392 putative transporter; Provisional 100.0
PRK15034462 nitrate/nitrite transport protein NarU; Provisiona 100.0
PRK10091382 MFS transport protein AraJ; Provisional 100.0
COG2223417 NarK Nitrate/nitrite transporter [Inorganic ion tr 100.0
TIGR00711485 efflux_EmrB drug resistance transporter, EmrB/QacA 100.0
PRK15402406 multidrug efflux system translocase MdfA; Provisio 100.0
KOG2532466 consensus Permease of the major facilitator superf 100.0
KOG1330493 consensus Sugar transporter/spinster transmembrane 100.0
PRK03633381 putative MFS family transporter protein; Provision 100.0
TIGR00900365 2A0121 H+ Antiporter protein. 100.0
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 100.0
PRK09874408 drug efflux system protein MdtG; Provisional 99.98
TIGR00710385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.98
TIGR00881379 2A0104 phosphoglycerate transporter family protein 99.98
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.98
TIGR00897402 2A0118 polyol permease family. This family of prot 99.98
KOG2533495 consensus Permease of the major facilitator superf 99.97
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.97
PF07690352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.97
PRK11043401 putative transporter; Provisional 99.97
KOG0255521 consensus Synaptic vesicle transporter SVOP and re 99.97
PRK11195393 lysophospholipid transporter LplT; Provisional 99.97
PRK15403413 multidrug efflux system protein MdtM; Provisional 99.97
PRK10133438 L-fucose transporter; Provisional 99.97
PRK11010491 ampG muropeptide transporter; Validated 99.97
PRK10473392 multidrug efflux system protein MdtL; Provisional 99.97
PRK11102377 bicyclomycin/multidrug efflux system; Provisional 99.97
PRK11646400 multidrug resistance protein MdtH; Provisional 99.97
TIGR00885410 fucP L-fucose:H+ symporter permease. This family d 99.96
TIGR00886366 2A0108 nitrite extrusion protein (nitrite facilita 99.96
PRK15011393 sugar efflux transporter B; Provisional 99.96
PRK11652394 emrD multidrug resistance protein D; Provisional 99.96
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.96
PRK10054395 putative transporter; Provisional 99.96
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.96
TIGR00896355 CynX cyanate transporter. This family of proteins 99.96
PRK09528420 lacY galactoside permease; Reviewed 99.95
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.95
PRK11902402 ampG muropeptide transporter; Reviewed 99.95
PF06609599 TRI12: Fungal trichothecene efflux pump (TRI12); I 99.95
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.95
KOG2615451 consensus Permease of the major facilitator superf 99.95
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.95
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 99.95
PRK10207489 dipeptide/tripeptide permease B; Provisional 99.95
TIGR00806511 rfc RFC reduced folate carrier. Proteins of the RF 99.94
TIGR00805633 oat sodium-independent organic anion transporter. 99.94
TIGR00901356 2A0125 AmpG-related permease. 99.94
TIGR00924475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.94
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.94
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.94
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.94
COG2807395 CynX Cyanate permease [Inorganic ion transport and 99.94
COG0738422 FucP Fucose permease [Carbohydrate transport and m 99.93
KOG3764464 consensus Vesicular amine transporter [Intracellul 99.93
TIGR01301477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.93
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.92
PTZ00207591 hypothetical protein; Provisional 99.92
PRK09584500 tppB putative tripeptide transporter permease; Rev 99.91
PRK10429473 melibiose:sodium symporter; Provisional 99.89
PRK15462493 dipeptide/tripeptide permease D; Provisional 99.89
PRK09669444 putative symporter YagG; Provisional 99.89
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.88
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.88
TIGR00788468 fbt folate/biopterin transporter. The only functio 99.88
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 99.88
COG2211467 MelB Na+/melibiose symporter and related transport 99.86
KOG2563480 consensus Permease of the major facilitator superf 99.86
PF13347428 MFS_2: MFS/sugar transport protein 99.85
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 99.85
PRK11462460 putative transporter; Provisional 99.84
PRK09848448 glucuronide transporter; Provisional 99.83
KOG2325488 consensus Predicted transporter/transmembrane prot 99.8
COG2270438 Permeases of the major facilitator superfamily [Ge 99.79
KOG3626735 consensus Organic anion transporter [Secondary met 99.78
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.77
COG3104498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 99.75
PF03137539 OATP: Organic Anion Transporter Polypeptide (OATP) 99.71
PRK10642490 proline/glycine betaine transporter; Provisional 99.67
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 99.63
KOG2816463 consensus Predicted transporter ADD1 (major facili 99.62
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.56
TIGR01299742 synapt_SV2 synaptic vesicle protein SV2. This mode 99.56
TIGR00889418 2A0110 nucleoside transporter. This family of prot 99.55
PRK15011393 sugar efflux transporter B; Provisional 99.49
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 99.48
PRK09528420 lacY galactoside permease; Reviewed 99.48
PRK11551406 putative 3-hydroxyphenylpropionic transporter MhpT 99.47
TIGR00890377 2A0111 Oxalate/Formate Antiporter. 99.45
PRK11663 434 regulatory protein UhpC; Provisional 99.45
cd06174352 MFS The Major Facilitator Superfamily (MFS) is a l 99.44
PRK05122399 major facilitator superfamily transporter; Provisi 99.44
PF05631354 DUF791: Protein of unknown function (DUF791); Inte 99.42
COG2271 448 UhpC Sugar phosphate permease [Carbohydrate transp 99.41
PRK09874408 drug efflux system protein MdtG; Provisional 99.4
PRK09556467 uhpT sugar phosphate antiporter; Reviewed 99.39
TIGR02332 412 HpaX 4-hydroxyphenylacetate permease. This protein 99.39
TIGR00895 398 2A0115 benzoate transport. 99.38
PRK10213 394 nepI ribonucleoside transporter; Reviewed 99.38
PRK12382392 putative transporter; Provisional 99.38
TIGR00899375 2A0120 sugar efflux transporter. This family of pr 99.38
TIGR00892455 2A0113 monocarboxylate transporter 1. 99.37
TIGR00893 399 2A0114 d-galactonate transporter. 99.37
TIGR00891 405 2A0112 putative sialic acid transporter. 99.37
PRK10489417 enterobactin exporter EntS; Provisional 99.36
PRK09705393 cynX putative cyanate transporter; Provisional 99.35
PRK10054 395 putative transporter; Provisional 99.34
PRK09952438 shikimate transporter; Provisional 99.34
TIGR00881 379 2A0104 phosphoglycerate transporter family protein 99.34
PRK03545390 putative arabinose transporter; Provisional 99.34
TIGR00902382 2A0127 phenyl proprionate permease family protein. 99.34
PRK03893496 putative sialic acid transporter; Provisional 99.34
PF01770412 Folate_carrier: Reduced folate carrier; InterPro: 99.34
TIGR00710 385 efflux_Bcr_CflA drug resistance transporter, Bcr/C 99.34
KOG3098461 consensus Uncharacterized conserved protein [Funct 99.34
KOG3762618 consensus Predicted transporter [General function 99.33
PRK03633381 putative MFS family transporter protein; Provision 99.32
PRK15462 493 dipeptide/tripeptide permease D; Provisional 99.32
COG2814 394 AraJ Arabinose efflux permease [Carbohydrate trans 99.32
TIGR00711 485 efflux_EmrB drug resistance transporter, EmrB/QacA 99.32
PRK10504 471 putative transporter; Provisional 99.31
PRK14995 495 methyl viologen resistance protein SmvA; Provision 99.31
TIGR00924 475 yjdL_sub1_fam amino acid/peptide transporter (Pept 99.31
PF07690 352 MFS_1: Major Facilitator Superfamily; InterPro: IP 99.3
PRK12307 426 putative sialic acid transporter; Provisional 99.3
PLN00028 476 nitrate transmembrane transporter; Provisional 99.3
TIGR00712 438 glpT glycerol-3-phosphate transporter. This model 99.29
TIGR00897402 2A0118 polyol permease family. This family of prot 99.29
PRK03699394 putative transporter; Provisional 99.29
PRK10473 392 multidrug efflux system protein MdtL; Provisional 99.28
TIGR00883394 2A0106 metabolite-proton symporter. This model rep 99.28
TIGR00879481 SP MFS transporter, sugar porter (SP) family. This 99.28
PRK11273 452 glpT sn-glycerol-3-phosphate transporter; Provisio 99.27
PRK11010491 ampG muropeptide transporter; Validated 99.27
PF11700477 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR0 99.27
PRK10091 382 MFS transport protein AraJ; Provisional 99.25
PRK10077479 xylE D-xylose transporter XylE; Provisional 99.25
PRK10207 489 dipeptide/tripeptide permease B; Provisional 99.25
PRK15402 406 multidrug efflux system translocase MdfA; Provisio 99.24
PRK11652 394 emrD multidrug resistance protein D; Provisional 99.24
TIGR00900365 2A0121 H+ Antiporter protein. 99.22
TIGR00903 368 2A0129 major facilitator 4 family protein. This fa 99.22
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 99.21
COG2270438 Permeases of the major facilitator superfamily [Ge 99.2
PRK11646 400 multidrug resistance protein MdtH; Provisional 99.2
TIGR00887 502 2A0109 phosphate:H+ symporter. This model represen 99.2
PF05977524 MFS_3: Transmembrane secretion effector; InterPro: 99.19
TIGR00882396 2A0105 oligosaccharide:H+ symporter. 99.19
PRK09584 500 tppB putative tripeptide transporter permease; Rev 99.19
PRK15403 413 multidrug efflux system protein MdtM; Provisional 99.19
TIGR00894 465 2A0114euk Na(+)-dependent inorganic phosphate cotr 99.18
KOG1330 493 consensus Sugar transporter/spinster transmembrane 99.17
PRK11128382 putative 3-phenylpropionic acid transporter; Provi 99.17
TIGR00792437 gph sugar (Glycoside-Pentoside-Hexuronide) transpo 99.17
PRK11102 377 bicyclomycin/multidrug efflux system; Provisional 99.17
PRK10406 432 alpha-ketoglutarate transporter; Provisional 99.16
TIGR00886 366 2A0108 nitrite extrusion protein (nitrite facilita 99.14
TIGR02718390 sider_RhtX_FptX siderophore transporter, RhtX/FptX 99.13
PRK11043 401 putative transporter; Provisional 99.13
PRK15075434 citrate-proton symporter; Provisional 99.13
TIGR00885 410 fucP L-fucose:H+ symporter permease. This family d 99.13
PRK11195 393 lysophospholipid transporter LplT; Provisional 99.12
PRK15034 462 nitrate/nitrite transport protein NarU; Provisiona 99.11
TIGR00898505 2A0119 cation transport protein. 99.11
TIGR00880141 2_A_01_02 Multidrug resistance protein. 99.1
TIGR01272310 gluP glucose/galactose transporter. Disruption of 99.05
PRK11902402 ampG muropeptide transporter; Reviewed 99.05
TIGR00806 511 rfc RFC reduced folate carrier. Proteins of the RF 99.04
PRK09848448 glucuronide transporter; Provisional 99.03
COG2223 417 NarK Nitrate/nitrite transporter [Inorganic ion tr 99.03
KOG2615 451 consensus Permease of the major facilitator superf 99.03
TIGR01301 477 GPH_sucrose GPH family sucrose/H+ symporter. This 99.03
KOG2504509 consensus Monocarboxylate transporter [Carbohydrat 99.02
TIGR00805 633 oat sodium-independent organic anion transporter. 99.0
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 99.0
PF03825400 Nuc_H_symport: Nucleoside H+ symporter 99.0
PRK08633 1146 2-acyl-glycerophospho-ethanolamine acyltransferase 99.0
TIGR00896355 CynX cyanate transporter. This family of proteins 98.99
PRK10429473 melibiose:sodium symporter; Provisional 98.98
PF01306412 LacY_symp: LacY proton/sugar symporter; InterPro: 98.97
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 98.96
TIGR00901356 2A0125 AmpG-related permease. 98.96
PRK10133 438 L-fucose transporter; Provisional 98.96
PTZ00207 591 hypothetical protein; Provisional 98.95
KOG0569485 consensus Permease of the major facilitator superf 98.94
COG0477338 ProP Permeases of the major facilitator superfamil 98.93
KOG2532 466 consensus Permease of the major facilitator superf 98.91
PRK09669444 putative symporter YagG; Provisional 98.9
PRK06814 1140 acylglycerophosphoethanolamine acyltransferase; Pr 98.9
PF13347428 MFS_2: MFS/sugar transport protein 98.88
KOG4686459 consensus Predicted sugar transporter [Carbohydrat 98.87
TIGR00769472 AAA ADP/ATP carrier protein family. These proteins 98.85
KOG3764 464 consensus Vesicular amine transporter [Intracellul 98.85
KOG0255 521 consensus Synaptic vesicle transporter SVOP and re 98.84
KOG0637498 consensus Sucrose transporter and related proteins 98.82
PF06609 599 TRI12: Fungal trichothecene efflux pump (TRI12); I 98.8
COG2211467 MelB Na+/melibiose symporter and related transport 98.78
KOG0252 538 consensus Inorganic phosphate transporter [Inorgan 98.76
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 98.76
COG2807395 CynX Cyanate permease [Inorganic ion transport and 98.75
TIGR00788468 fbt folate/biopterin transporter. The only functio 98.71
KOG0253528 consensus Synaptic vesicle transporter SV2 (major 98.7
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 98.66
PRK11462460 putative transporter; Provisional 98.61
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 98.61
PF06813250 Nodulin-like: Nodulin-like; InterPro: IPR010658 Th 98.61
COG3104 498 PTR2 Dipeptide/tripeptide permease [Amino acid tra 98.59
KOG2533 495 consensus Permease of the major facilitator superf 98.56
PF03209403 PUCC: PUCC protein; InterPro: IPR004896 This prote 98.53
KOG0254 513 consensus Predicted transporter (major facilitator 98.49
COG0738 422 FucP Fucose permease [Carbohydrate transport and m 98.49
KOG4332454 consensus Predicted sugar transporter [Carbohydrat 98.46
KOG3810433 consensus Micronutrient transporters (folate trans 98.4
PF00083 451 Sugar_tr: Sugar (and other) transporter; InterPro: 98.39
KOG2325 488 consensus Predicted transporter/transmembrane prot 98.36
KOG3574510 consensus Acetyl-CoA transporter [Inorganic ion tr 98.3
KOG3762618 consensus Predicted transporter [General function 98.27
PF1283277 MFS_1_like: MFS_1 like family 98.18
TIGR00939437 2a57 Equilibrative Nucleoside Transporter (ENT). 98.18
KOG2816 463 consensus Predicted transporter ADD1 (major facili 98.17
KOG1479406 consensus Nucleoside transporter [Nucleotide trans 98.06
PF13000544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 98.05
KOG1237571 consensus H+/oligopeptide symporter [Amino acid tr 98.02
PF03219491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 98.0
TIGR00926 654 2A1704 Peptide:H+ symporter (also transports b-lac 97.92
PF05631 354 DUF791: Protein of unknown function (DUF791); Inte 97.89
KOG2563 480 consensus Permease of the major facilitator superf 97.87
PF00854372 PTR2: POT family; InterPro: IPR000109 This entry r 97.82
PF03137 539 OATP: Organic Anion Transporter Polypeptide (OATP) 97.49
KOG3626 735 consensus Organic anion transporter [Secondary met 97.31
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 97.25
PF01770 412 Folate_carrier: Reduced folate carrier; InterPro: 97.19
PF03092433 BT1: BT1 family; InterPro: IPR004324 Members of th 97.17
PF1283277 MFS_1_like: MFS_1 like family 97.15
PRK03612521 spermidine synthase; Provisional 97.14
COG3202509 ATP/ADP translocase [Energy production and convers 97.13
PF02487402 CLN3: CLN3 protein; InterPro: IPR003492 Batten's d 97.12
PF05978156 UNC-93: Ion channel regulatory protein UNC-93; Int 97.1
TIGR00769 472 AAA ADP/ATP carrier protein family. These proteins 97.06
KOG3098461 consensus Uncharacterized conserved protein [Funct 96.97
KOG3097390 consensus Predicted membrane protein [Function unk 96.95
PF01733309 Nucleoside_tran: Nucleoside transporter; InterPro: 96.62
PF06963432 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 Thi 96.33
COG0477 338 ProP Permeases of the major facilitator superfamil 95.78
KOG3880409 consensus Predicted small molecule transporter inv 95.49
PF00854 372 PTR2: POT family; InterPro: IPR000109 This entry r 95.31
PF03219 491 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 94.89
KOG0637 498 consensus Sucrose transporter and related proteins 94.87
PRK03612 521 spermidine synthase; Provisional 93.87
KOG1479 406 consensus Nucleoside transporter [Nucleotide trans 93.82
PF0677985 DUF1228: Protein of unknown function (DUF1228); In 93.81
KOG3574 510 consensus Acetyl-CoA transporter [Inorganic ion tr 93.61
COG3202 509 ATP/ADP translocase [Energy production and convers 92.78
TIGR00939 437 2a57 Equilibrative Nucleoside Transporter (ENT). 92.74
PF13000 544 Acatn: Acetyl-coenzyme A transporter 1; InterPro: 91.07
KOG4332 454 consensus Predicted sugar transporter [Carbohydrat 87.75
KOG1237 571 consensus H+/oligopeptide symporter [Amino acid tr 87.29
KOG3880409 consensus Predicted small molecule transporter inv 85.06
COG4262508 Predicted spermidine synthase with an N-terminal m 83.76
PF07672267 MFS_Mycoplasma: Mycoplasma MFS transporter; InterP 83.71
KOG2601503 consensus Iron transporter [Inorganic ion transpor 81.91
COG5336116 Uncharacterized protein conserved in bacteria [Fun 81.07
KOG2601 503 consensus Iron transporter [Inorganic ion transpor 80.75
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=2e-48  Score=354.29  Aligned_cols=479  Identities=68%  Similarity=1.139  Sum_probs=404.8

Q ss_pred             chHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhcch
Q 046667           18 QWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKLGR   97 (540)
Q Consensus        18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~Gr   97 (540)
                      +|++...+++..++.|.+.||..+++.+.+.+...|++.++..  .+.++...+.+..+..+|..+||++.|+++||+||
T Consensus        36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~--g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR  113 (538)
T KOG0252|consen   36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESG--GHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR  113 (538)
T ss_pred             hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCC--CcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            8899999999999999999999999999999999998766544  56888899999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHHhhccCCCCcc-hhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHHHH
Q 046667           98 KKVYGMTLMLMVICSIASGLSFGNSPK-GVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI  176 (540)
Q Consensus        98 r~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~G~  176 (540)
                      |+++...++++.+++++++++...+++ ..++++...|++.|+|.|+-+|...+..+|...+++||...+.+.+..+.|.
T Consensus       114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi  193 (538)
T KOG0252|consen  114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI  193 (538)
T ss_pred             hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence            999999999999999999988776666 5678999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCCCChhhHHHhhccHHHHHHH
Q 046667          177 LAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASD  256 (540)
Q Consensus       177 ~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~  256 (540)
                      +.|.+++..+...+...++..        ++-+..+.-||..|.+++++++..+...+.+|||+++..+..++.+.+.++
T Consensus       194 laG~ivt~Iv~~~fe~~~~~~--------~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d  265 (538)
T KOG0252|consen  194 LAGGIVALIVSAIFEKIFNGP--------STYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGD  265 (538)
T ss_pred             hhccHHHHHHHHHHhccCCCC--------CCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhc
Confidence            999999888877665422211        111233456999999999999999999999999999976777776766665


Q ss_pred             HHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCcccchh
Q 046667          257 MSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSAVGWIPSAKTMN  336 (540)
Q Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  336 (540)
                      ..+....+.+++++. +.....+.+....|...+.+++-+.++..+..||..-+.+|...++...+++++|+.+..... 
T Consensus       266 ~~k~~~~~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~-  343 (538)
T KOG0252|consen  266 MKKVLSVDIEAESTA-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY-  343 (538)
T ss_pred             cccccccccchhhcc-ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH-
Confidence            555544433333333 222233344555677777777888999999999999999999999999999999999988655 


Q ss_pred             hHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHHHHHH
Q 046667          337 AIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFF  416 (540)
Q Consensus       337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (540)
                        +..+..+-...++..++.++|.++...++|++|||+..+.+++++.+..+.++.....   ..+.....+.+.+...+
T Consensus       344 --~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~---~~~~~Gf~v~y~l~~ff  418 (538)
T KOG0252|consen  344 --HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ---LENTIGFVVLYSLTFFF  418 (538)
T ss_pred             --HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc---ccccCceeehHHHHHHH
Confidence              4444556667788888999999999999999999999999999999999988877642   22456677888888889


Q ss_pred             hhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHHHHHHH
Q 046667          417 ANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLG  496 (540)
Q Consensus       417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  496 (540)
                      ...+++.....+.+|.+|.+.|++..|+..+++-+|++++...+.++.+..        |+...+.+.++++++++++++
T Consensus       419 ~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~--------yp~~~g~~~v~~i~~~~~~~g  490 (538)
T KOG0252|consen  419 GNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN--------YPPNIGVRNVFIILAGCMLLG  490 (538)
T ss_pred             HhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc--------CCccccchHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999999999998522        456789999999999999999


Q ss_pred             HHHHHhcccCCCCChhhhccccccc
Q 046667          497 LLFTFLVPESKGKSLEEMSGENQDE  521 (540)
Q Consensus       497 ~~~~~~~~~~~~~~~~~~~~~~~~~  521 (540)
                      .+..+++||+++++.+|++++.+.+
T Consensus       491 i~~T~l~pEtk~~~leei~~e~~~~  515 (538)
T KOG0252|consen  491 ILFTLLIPETKGKSLEEISNEEESN  515 (538)
T ss_pred             HheeEEeecccccCHHHhcChhhcc
Confidence            9999999999999999986654443

>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>PRK10642 proline/glycine betaine transporter; Provisional Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2 Back     alignment and domain information
>TIGR00889 2A0110 nucleoside transporter Back     alignment and domain information
>PRK15011 sugar efflux transporter B; Provisional Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PRK09528 lacY galactoside permease; Reviewed Back     alignment and domain information
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional Back     alignment and domain information
>TIGR00890 2A0111 Oxalate/Formate Antiporter Back     alignment and domain information
>PRK11663 regulatory protein UhpC; Provisional Back     alignment and domain information
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters Back     alignment and domain information
>PRK05122 major facilitator superfamily transporter; Provisional Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09874 drug efflux system protein MdtG; Provisional Back     alignment and domain information
>PRK09556 uhpT sugar phosphate antiporter; Reviewed Back     alignment and domain information
>TIGR02332 HpaX 4-hydroxyphenylacetate permease Back     alignment and domain information
>TIGR00895 2A0115 benzoate transport Back     alignment and domain information
>PRK10213 nepI ribonucleoside transporter; Reviewed Back     alignment and domain information
>PRK12382 putative transporter; Provisional Back     alignment and domain information
>TIGR00899 2A0120 sugar efflux transporter Back     alignment and domain information
>TIGR00892 2A0113 monocarboxylate transporter 1 Back     alignment and domain information
>TIGR00893 2A0114 d-galactonate transporter Back     alignment and domain information
>TIGR00891 2A0112 putative sialic acid transporter Back     alignment and domain information
>PRK10489 enterobactin exporter EntS; Provisional Back     alignment and domain information
>PRK09705 cynX putative cyanate transporter; Provisional Back     alignment and domain information
>PRK10054 putative transporter; Provisional Back     alignment and domain information
>PRK09952 shikimate transporter; Provisional Back     alignment and domain information
>TIGR00881 2A0104 phosphoglycerate transporter family protein Back     alignment and domain information
>PRK03545 putative arabinose transporter; Provisional Back     alignment and domain information
>TIGR00902 2A0127 phenyl proprionate permease family protein Back     alignment and domain information
>PRK03893 putative sialic acid transporter; Provisional Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PRK03633 putative MFS family transporter protein; Provisional Back     alignment and domain information
>PRK15462 dipeptide/tripeptide permease D; Provisional Back     alignment and domain information
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily Back     alignment and domain information
>PRK10504 putative transporter; Provisional Back     alignment and domain information
>PRK14995 methyl viologen resistance protein SmvA; Provisional Back     alignment and domain information
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial Back     alignment and domain information
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms Back     alignment and domain information
>PRK12307 putative sialic acid transporter; Provisional Back     alignment and domain information
>PLN00028 nitrate transmembrane transporter; Provisional Back     alignment and domain information
>TIGR00712 glpT glycerol-3-phosphate transporter Back     alignment and domain information
>TIGR00897 2A0118 polyol permease family Back     alignment and domain information
>PRK03699 putative transporter; Provisional Back     alignment and domain information
>PRK10473 multidrug efflux system protein MdtL; Provisional Back     alignment and domain information
>TIGR00883 2A0106 metabolite-proton symporter Back     alignment and domain information
>TIGR00879 SP MFS transporter, sugar porter (SP) family Back     alignment and domain information
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional Back     alignment and domain information
>PRK11010 ampG muropeptide transporter; Validated Back     alignment and domain information
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions Back     alignment and domain information
>PRK10091 MFS transport protein AraJ; Provisional Back     alignment and domain information
>PRK10077 xylE D-xylose transporter XylE; Provisional Back     alignment and domain information
>PRK10207 dipeptide/tripeptide permease B; Provisional Back     alignment and domain information
>PRK15402 multidrug efflux system translocase MdfA; Provisional Back     alignment and domain information
>PRK11652 emrD multidrug resistance protein D; Provisional Back     alignment and domain information
>TIGR00900 2A0121 H+ Antiporter protein Back     alignment and domain information
>TIGR00903 2A0129 major facilitator 4 family protein Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>COG2270 Permeases of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PRK11646 multidrug resistance protein MdtH; Provisional Back     alignment and domain information
>TIGR00887 2A0109 phosphate:H+ symporter Back     alignment and domain information
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily Back     alignment and domain information
>TIGR00882 2A0105 oligosaccharide:H+ symporter Back     alignment and domain information
>PRK09584 tppB putative tripeptide transporter permease; Reviewed Back     alignment and domain information
>PRK15403 multidrug efflux system protein MdtM; Provisional Back     alignment and domain information
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter Back     alignment and domain information
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional Back     alignment and domain information
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter Back     alignment and domain information
>PRK11102 bicyclomycin/multidrug efflux system; Provisional Back     alignment and domain information
>PRK10406 alpha-ketoglutarate transporter; Provisional Back     alignment and domain information
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator) Back     alignment and domain information
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family Back     alignment and domain information
>PRK11043 putative transporter; Provisional Back     alignment and domain information
>PRK15075 citrate-proton symporter; Provisional Back     alignment and domain information
>TIGR00885 fucP L-fucose:H+ symporter permease Back     alignment and domain information
>PRK11195 lysophospholipid transporter LplT; Provisional Back     alignment and domain information
>PRK15034 nitrate/nitrite transport protein NarU; Provisional Back     alignment and domain information
>TIGR00898 2A0119 cation transport protein Back     alignment and domain information
>TIGR00880 2_A_01_02 Multidrug resistance protein Back     alignment and domain information
>TIGR01272 gluP glucose/galactose transporter Back     alignment and domain information
>PRK11902 ampG muropeptide transporter; Reviewed Back     alignment and domain information
>TIGR00806 rfc RFC reduced folate carrier Back     alignment and domain information
>PRK09848 glucuronide transporter; Provisional Back     alignment and domain information
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter Back     alignment and domain information
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00805 oat sodium-independent organic anion transporter Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF03825 Nuc_H_symport: Nucleoside H+ symporter Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>TIGR00896 CynX cyanate transporter Back     alignment and domain information
>PRK10429 melibiose:sodium symporter; Provisional Back     alignment and domain information
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) [] Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>TIGR00901 2A0125 AmpG-related permease Back     alignment and domain information
>PRK10133 L-fucose transporter; Provisional Back     alignment and domain information
>PTZ00207 hypothetical protein; Provisional Back     alignment and domain information
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK09669 putative symporter YagG; Provisional Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PF13347 MFS_2: MFS/sugar transport protein Back     alignment and domain information
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins Back     alignment and domain information
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism] Back     alignment and domain information
>TIGR00788 fbt folate/biopterin transporter Back     alignment and domain information
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>PRK11462 putative transporter; Provisional Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins Back     alignment and domain information
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon Back     alignment and domain information
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism] Back     alignment and domain information
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters Back     alignment and domain information
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only] Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>KOG3762 consensus Predicted transporter [General function prediction only] Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only] Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors) Back     alignment and domain information
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function Back     alignment and domain information
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs) Back     alignment and domain information
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX) Back     alignment and domain information
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins Back     alignment and domain information
>PF12832 MFS_1_like: MFS_1 like family Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age Back     alignment and domain information
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans Back     alignment and domain information
>TIGR00769 AAA ADP/ATP carrier protein family Back     alignment and domain information
>KOG3098 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG3097 consensus Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs Back     alignment and domain information
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1 Back     alignment and domain information
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only] Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters Back     alignment and domain information
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions Back     alignment and domain information
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03612 spermidine synthase; Provisional Back     alignment and domain information
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism] Back     alignment and domain information
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters Back     alignment and domain information
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG3202 ATP/ADP translocase [Energy production and conversion] Back     alignment and domain information
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT) Back     alignment and domain information
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ] Back     alignment and domain information
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism] Back     alignment and domain information
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only] Back     alignment and domain information
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only] Back     alignment and domain information
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS) Back     alignment and domain information
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query540
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 5e-13
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 1e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 Back     alignment and structure
 Score = 70.1 bits (172), Expect = 5e-13
 Identities = 59/443 (13%), Positives = 129/443 (29%), Gaps = 82/443 (18%)

Query: 84  GQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGG 143
            +   G + D+   +      L+L     +  G     +    +A +    F  G+  G 
Sbjct: 78  SKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT--SSIAVMFVLLFLCGWFQGM 135

Query: 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFG-ILAGGIFALIVSSAFNAAFKAPAYEDD 202
            +P     M  + ++K RG  ++        G  +   +F L ++   +           
Sbjct: 136 GWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFND----------- 184

Query: 203 PIASTAPQADYLWR---IIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMSK 259
                       W     +    A+  AL  +  M+                  +  +  
Sbjct: 185 ------------WHAALYMPAFCAILVALFAFAMMRDTP--------------QSCGLPP 218

Query: 260 VLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQ 319
           + + + +  +   ++ +++              +    L         + +  Y      
Sbjct: 219 IEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNK---LLWYIAIANVFVYLLRY---GI- 271

Query: 320 KDIFSAVGWIPS----AKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAI 375
                 + W P+     K         K + A  L        G        DK+ R   
Sbjct: 272 ------LDWSPTYLKEVKHFALD----KSSWAYFLYEYAGIP-GTLLCGWMSDKVFRGNR 320

Query: 376 QMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPA 435
              G FFMT+   A  +   +W + +      +I  +   F  +GP     +   E+ P 
Sbjct: 321 GATGVFFMTLVTIATIV---YWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPK 377

Query: 436 RLRSTCHGISAASGKL-GAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNL 494
           +   T  G +   G L G++  +    Y                  G     +V+   ++
Sbjct: 378 KAAGTAAGFTGLFGYLGGSVAASAIVGYTVDF-------------FGWDGGFMVMIGGSI 424

Query: 495 LGLLFTFLVPESKGKSLEEMSGE 517
           L ++   +V   + +  E++  E
Sbjct: 425 LAVILLIVVMIGEKRRHEQLLQE 447
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Length = 451 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query540
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 100.0
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 100.0
3o7q_A438 L-fucose-proton symporter; transporter, multi-PASS 100.0
4aps_A491 DI-OR tripeptide H+ symporter; transport protein, 100.0
2gfp_A375 EMRD, multidrug resistance protein D; membrane pro 99.97
2xut_A524 Proton/peptide symporter family protein; transport 99.96
2cfq_A417 Lactose permease; transport, transport mechanism, 99.95
1pw4_A451 Glycerol-3-phosphate transporter; transmembrane, i 99.45
3o7q_A 438 L-fucose-proton symporter; transporter, multi-PASS 99.43
4aps_A 491 DI-OR tripeptide H+ symporter; transport protein, 99.38
2cfq_A417 Lactose permease; transport, transport mechanism, 99.37
4gc0_A491 D-xylose-proton symporter; MFS, transport protein; 99.32
2gfp_A 375 EMRD, multidrug resistance protein D; membrane pro 99.3
2xut_A 524 Proton/peptide symporter family protein; transport 99.24
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
Probab=100.00  E-value=1.9e-46  Score=378.24  Aligned_cols=457  Identities=20%  Similarity=0.283  Sum_probs=331.2

Q ss_pred             ccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhhc
Q 046667           16 KTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDKL   95 (540)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr~   95 (540)
                      .++++.+.+.++++++.+.++||...++.++|.+.+++....  +.+.+.+..+.|++.+++.+|..+|++++|+++||+
T Consensus         5 ~~~~y~~~i~~~a~lg~~~~Gyd~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~s~~~~G~~iG~~~~G~laDr~   82 (491)
T 4gc0_A            5 YNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQ--NLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF   82 (491)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHGGGGTHHHHHHHHTGGG--CCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT
T ss_pred             cChHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            344566777788889999999999999999999988873211  111234567889999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHhhc------------------cCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcC
Q 046667           96 GRKKVYGMTLMLMVICSIASGL------------------SFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYAN  157 (540)
Q Consensus        96 Grr~~~~~~~~~~~i~~~~~~~------------------~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~  157 (540)
                      |||++++++.+++.++++++++                  +++      +++++++|+++|++.|+..+...++++|+.|
T Consensus        83 GRk~~l~~~~~l~~i~~i~~a~~~~~~~~~~~~~~~~~~~a~~------~~~l~~~R~l~G~g~G~~~~~~~~~i~E~~p  156 (491)
T 4gc0_A           83 GRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGY------VPEFVIYRIIGGIGVGLASMLSPMYIAELAP  156 (491)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCTTTTTSCSSSSSSCCGGGGGC------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHHHhhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            9999999999999999999985                  455      7999999999999999999999999999999


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHHHHHHHhCC
Q 046667          158 KKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMP  237 (540)
Q Consensus       158 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~~~~~~~~~  237 (540)
                      +++|++..++.+.+..+|.++++.++..+......               ......+||+.+.+..++.++.++..+++|
T Consensus       157 ~~~rg~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  221 (491)
T 4gc0_A          157 AHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDA---------------SWLNTDGWRYMFASECIPALLFLMLLYTVP  221 (491)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCT---------------TTTTTTHHHHHHHTTHHHHHHHHHHGGGSC
T ss_pred             HHhhhhhHHhhhhhhhhhhhhhhhcchhhcccccc---------------ccccchhhHHHhhhhhhhhhhhhhhhhcCC
Confidence            99999999999999999999999988877543221               112346799999999998888888889999


Q ss_pred             CChhhHHHhhccHHHHHHHHHHHHhhhchhhHhhhhh-h-hcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 046667          238 ETARYTALVAKNAKQAASDMSKVLQVELEAEEQKIQE-L-DRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQ  315 (540)
Q Consensus       238 esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  315 (540)
                      |||+|+ ..+++.+++.+..++..+++...++....+ . .++++..    .........+.........+......+..
T Consensus       222 eSp~~L-~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (491)
T 4gc0_A          222 ESPRWL-MSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTG----GRLLMFGVGVIVIGVMLSIFQQFVGINVV  296 (491)
T ss_dssp             CCHHHH-HHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----THHHHSCCTHHHHHHHHHHHHHHTCHHHH
T ss_pred             CChHHH-HHcCchhHHHHhHHHhcCCchhHHHHHHHHHHHHhhhhhh----hHHHHhcccHHHHHHHHHHHHHHhhhhHH
Confidence            999997 444455555555555544332222111111 0 0000000    11111111122333333444444455666


Q ss_pred             hhhHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhccc
Q 046667          316 NLFQKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYD  395 (540)
Q Consensus       316 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~  395 (540)
                      ..|.+.+.+..+.....            .........+..+++.++++++.||+|||+.++.+.....++++.+.....
T Consensus       297 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~l~dr~Grr~~~~~~~~~~~~~~~~l~~~~~  364 (491)
T 4gc0_A          297 LYYAPEVFKTLGASTDI------------ALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFY  364 (491)
T ss_dssp             HHHHHHHHHHSSCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcchHHHHhcCCCccc------------hhhHHHHHHHHHHHHHHHHHHHHHhhcCcchhccchHHHHHHHHHHHHHHh
Confidence            67777777765543322            222455566777888889999999999999999988888887776655432


Q ss_pred             ccccCCchhHHHHHHHHHHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHHhHHHHHHHHHHHhhccccccCCCC
Q 046667          396 HWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKLGAIVGAFGFLYLAQSKDKTKTDAG  475 (540)
Q Consensus       396 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~i~~~i~~~~~~~~~~~~~~~~  475 (540)
                      .   ....+..+....+.......+..++.+.+.+|++|++.|+++.|+.+.++++++++++.+++.+.+.....     
T Consensus       365 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~fPt~~R~~~~g~~~~~~~~~~~i~~~~~p~l~~~~~~~-----  436 (491)
T 4gc0_A          365 T---QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLV-----  436 (491)
T ss_dssp             T---TCCHHHHHHHHHHHHHHHHTTTTHHHHHHHHHSSCTTTHHHHHHHHHHHHHHHHHHHHTHHHHHCHHHHHH-----
T ss_pred             c---ccchHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence            1   11223333333444445556677888899999999999999999999999999999999998876422100     


Q ss_pred             CCCCcchhhHHHHHHHHHHHHHHHHH-hcccCCCCChhhhcccccccc
Q 046667          476 YPPGIGVKNSLIVLGVVNLLGLLFTF-LVPESKGKSLEEMSGENQDEG  522 (540)
Q Consensus       476 ~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  522 (540)
                        ...++...|++++++++++.++.+ ++||||+|+.+|+++..+++.
T Consensus       437 --~~~~~~~~~~i~~~~~~~~~i~~~~~~PETkg~tLeei~~~f~~~~  482 (491)
T 4gc0_A          437 --AHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPET  482 (491)
T ss_dssp             --HHHTTCHHHHHHHHHHHHHHHHHHHHCCCCTTCCHHHHGGGTC---
T ss_pred             --hhhhhhHHHHHHHHHHHHHHHHHHheecCCCCCCHHHHHHHhCCCC
Confidence              123455678888888888888776 899999999999988766543
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>1pw4_A Glycerol-3-phosphate transporter; transmembrane, inner membrane, major facilitator superfamily, secondary active membrane transporter; 3.30A {Escherichia coli} SCOP: f.38.1.1 Back     alignment and structure
>3o7q_A L-fucose-proton symporter; transporter, multi-PASS membrane protei transport protein; HET: BNG; 3.14A {Escherichia coli} PDB: 3o7p_A* Back     alignment and structure
>4aps_A DI-OR tripeptide H+ symporter; transport protein, peptide transport, major facilitator SUPE transporter, MFS; 3.30A {Streptococcus thermophilus} Back     alignment and structure
>2cfq_A Lactose permease; transport, transport mechanism, lactose/H+ symport, sugar transport, transmembrane, formylation; 2.95A {Escherichia coli} SCOP: f.38.1.2 PDB: 1pv7_A* 1pv6_A 2cfp_A 2v8n_A 2y5y_A* Back     alignment and structure
>4gc0_A D-xylose-proton symporter; MFS, transport protein; HET: 6BG BNG; 2.60A {Escherichia coli} PDB: 4gbz_A* 4gby_A* Back     alignment and structure
>2gfp_A EMRD, multidrug resistance protein D; membrane protein, multidrug transporter; 3.50A {Escherichia coli} Back     alignment and structure
>2xut_A Proton/peptide symporter family protein; transport protein, membrane protein, major facilitator super transporter; 3.62A {Shewanella oneidensis} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 540
d1pw4a_447 f.38.1.1 (A:) Glycerol-3-phosphate transporter {Es 6e-15
d1pv7a_417 f.38.1.2 (A:) Lactose permease {Escherichia coli [ 9e-05
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Length = 447 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

 Score = 74.7 bits (182), Expect = 6e-15
 Identities = 58/500 (11%), Positives = 127/500 (25%), Gaps = 77/500 (15%)

Query: 19  WYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAF 78
              +   +    G+          +L    L                             
Sbjct: 21  RLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-----------GFSRGDLGFALSGIS 69

Query: 79  CGTLAGQLFFGWLGDKLGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLG 138
                 +   G + D+   +      L+L     +   + F       +A +    F  G
Sbjct: 70  IAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVML--FMGFVPWATSSIAVMFVLLFLCG 127

Query: 139 FGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIFALIVSSAFNAAFKAPA 198
           +  G  +P     M  + ++K RG  ++        G     +  L+             
Sbjct: 128 WFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLL------------- 174

Query: 199 YEDDPIASTAPQADYLWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNAKQAASDMS 258
                  +          +      L A   +      P++     +             
Sbjct: 175 -----GMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNE 229

Query: 259 KVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLF 318
           K  Q                             +    ++L     W++     +   L 
Sbjct: 230 KAEQ------------------------ELTAKQIFMQYVLPNKLLWYIAIANVFVYLLR 265

Query: 319 QKDIFSAVGWIPSAKTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMM 378
              +  +  ++   K     +     +     +   + +PG        DK+ R      
Sbjct: 266 YGILDWSPTYLKEVKHFALDK-----SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGAT 320

Query: 379 GFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSLTFFFANFGPNATTFVVPAEIFPARLR 438
           G FFMT+   A  +    W + +      +I  +   F  +GP     +   E+ P +  
Sbjct: 321 GVFFMTLVTIATIVY---WMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAA 377

Query: 439 STCHGISAASGKL-GAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGVVNLLGL 497
            T  G +   G L G++  +    Y                  G     +V+   ++L +
Sbjct: 378 GTAAGFTGLFGYLGGSVAASAIVGYTVDF-------------FGWDGGFMVMIGGSILAV 424

Query: 498 LFTFLVPESKGKSLEEMSGE 517
           +   +V   + +  E++  E
Sbjct: 425 ILLIVVMIGEKRRHEQLLQE 444
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Length = 417 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query540
d1pw4a_447 Glycerol-3-phosphate transporter {Escherichia coli 100.0
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.96
d1pv7a_417 Lactose permease {Escherichia coli [TaxId: 562]} 99.5
d1pw4a_ 447 Glycerol-3-phosphate transporter {Escherichia coli 99.48
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MFS general substrate transporter
superfamily: MFS general substrate transporter
family: Glycerol-3-phosphate transporter
domain: Glycerol-3-phosphate transporter
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.5e-38  Score=312.67  Aligned_cols=410  Identities=15%  Similarity=0.144  Sum_probs=282.9

Q ss_pred             cccchHHHHHHHHHHHHHHHHHHhHhHHHHHHHhhhhhhcccCCCCCCCCCChhhhhHHHHHHHHHHHHhhhhhhhhhhh
Q 046667           15 AKTQWYHFTAIIVAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGSLPPNVSAAVNGVAFCGTLAGQLFFGWLGDK   94 (540)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~Dr   94 (540)
                      ++.++++|.++..+.++++..++++..++.+.|.+. |+          ++|.+|.|++.+++.++++++++++|+++||
T Consensus        17 ~~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~p~~~-~~----------g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr   85 (447)
T d1pw4a_          17 PTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLV-EQ----------GFSRGDLGFALSGISIAYGFSKFIMGSVSDR   85 (447)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTSHHHHHHHTT-SS----------TTCSSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344566788888899999999999999999999876 46          8999999999999999999999999999999


Q ss_pred             cchhHHHHHHHHHHHHHHHHhhccCCCCcchhhHHHHHHHHHHhhccccchhhHHHHHhhhcCcccchhHHHHHHHHHHH
Q 046667           95 LGRKKVYGMTLMLMVICSIASGLSFGNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF  174 (540)
Q Consensus        95 ~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r~~~~~~~~~~~~~  174 (540)
                      +|||+++.++.++.+++.+++++++..  ..+++.++++|++.|++.+...+...+++.|++|+++|++++++.+.+..+
T Consensus        86 ~g~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~  163 (447)
T d1pw4a_          86 SNPRVFLPAGLILAAAVMLFMGFVPWA--TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNV  163 (447)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHCHHH--HSSSSHHHHHHHHHHHHHHHTHHHHHHHHHTTCTTTHHHHHHHHHHHHHHH
T ss_pred             cCchHHHHHHHHHHHHHHhhccccchh--hhhHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHhhcccccccccccccch
Confidence            999999999999999999998876410  001689999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhhccCCCCCCCCCccccCCCCCcchHHHHHhhhHHHHHH-HHHHHhCCCChhhHHHhhccHHHH
Q 046667          175 GILAGGIFALIVSSAFNAAFKAPAYEDDPIASTAPQADYLWRIIVMVGALPAALT-YYWRMKMPETARYTALVAKNAKQA  253 (540)
Q Consensus       175 G~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gwr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~  253 (540)
                      |..+++.+++.+.....                      +||+.|++.++..++. ++..++.+|+|+.....+.++.+ 
T Consensus       164 g~~i~~~~~~~~~~~~~----------------------~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  220 (447)
T d1pw4a_         164 GGGIPPLLFLLGMAWFN----------------------DWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYK-  220 (447)
T ss_dssp             HHTSHHHHHHHHHHHTC----------------------CSTTCTHHHHHHHHHHHHHHHHHCCCSSTTTCCCSCTTTC-
T ss_pred             hhhhhhhhhhhHhhhhh----------------------cccccchhhhhhHHHHHHHHHHhcccchhhcccchhhhhh-
Confidence            99999999888765443                      3999999877766654 44456677777642111111000 


Q ss_pred             HHHHHHHHhhhchhhHhhhhhhhcccCCccchhhHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCCcc
Q 046667          254 ASDMSKVLQVELEAEEQKIQELDRDKGNGYGLFSKEFLRRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIFSA-VGWIPSA  332 (540)
Q Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~  332 (540)
                       ++           ..++.++..+++....+...+...+  .+.++......++.....+....+.+.++.+ .+++...
T Consensus       221 -~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (447)
T d1pw4a_         221 -ND-----------YPDDYNEKAEQELTAKQIFMQYVLP--NKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDK  286 (447)
T ss_dssp             -CC------------------------CCTHHHHHHTSS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHBTTBSCCCHHH
T ss_pred             -hh-----------cccchhhccccccchhhHHHHHHHc--CchHHHHHHHhhhhhhhhhcchhhhhhhcccccccccch
Confidence             00           0000000000111111111111111  1234444445555555666666777776554 2332222


Q ss_pred             cchhhHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHhcccccccCCchhHHHHHHHH
Q 046667          333 KTMNAIQEVYKIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQMMGFFFMTVFMFALAIPYDHWTHKSNRLGFVIIYSL  412 (540)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (540)
                                  .........+..+++.++.+++.||++|++..........+..........   ..........+..+
T Consensus       287 ------------~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~  351 (447)
T d1pw4a_         287 ------------SSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWM---NPAGNPTVDMICMI  351 (447)
T ss_dssp             ------------HHHHHHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHHTTS---CCTTCHHHHHHHHH
T ss_pred             ------------hhhhhhcchhhhhhhhhhhhhhhhhccccccccccchhHHHHHHHHHHHHh---cccccHHHHHHHHH
Confidence                        233556666777889999999999999876544444333333322222211   11122333333333


Q ss_pred             HHHHhhcCCccceeeeecccCchhhhhhhhHHHHHHHHH-hHHHHHHHHHHHhhccccccCCCCCCCCcchhhHHHHHHH
Q 046667          413 TFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKL-GAIVGAFGFLYLAQSKDKTKTDAGYPPGIGVKNSLIVLGV  491 (540)
Q Consensus       413 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~i~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  491 (540)
                      ..++...+..+..+.+..|.+|++.|+++.|+.+.++++ |.+++|.+.|++.|             ..|+...|++.++
T Consensus       352 ~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~g~~~~~~~~g~~~~-------------~~g~~~~~~~~~~  418 (447)
T d1pw4a_         352 VIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD-------------FFGWDGGFMVMIG  418 (447)
T ss_dssp             HHHHHHTHHHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------SSCSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhChHHHHHHHHH
Confidence            344444445566778889999999999999999999888 45678999999985             5678888888888


Q ss_pred             HHHHHHHHHHh
Q 046667          492 VNLLGLLFTFL  502 (540)
Q Consensus       492 ~~~~~~~~~~~  502 (540)
                      +++++.++.++
T Consensus       419 ~~~~~~~~~~~  429 (447)
T d1pw4a_         419 GSILAVILLIV  429 (447)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            77777766663
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pv7a_ f.38.1.2 (A:) Lactose permease {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pw4a_ f.38.1.1 (A:) Glycerol-3-phosphate transporter {Escherichia coli [TaxId: 562]} Back     information, alignment and structure