Citrus Sinensis ID: 046669

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------
Protein Sequence
MEARPPVIAKKLGRMVRVILFMIQKGITKSKFIGKALNDAVLYDYGAITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHHAKDNKRQAASAAVAGCYREDDDVAASDVDVAEASPLVGPVRRGVRVTDSPFPLRDDDKDCHVDKEAEEFIKKFYQQLRLQKWNAAREAAATLYG
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEccccccccccccccHccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MEARPPVIAKKLGRMVRVILFMIQKGITKSKFIGKALNDAVLYDYGAitcrshdmhasfvcpreyefscsnspayqpyvipslHVSRRKILHHAKDNKRQAASAAVAGcyredddvaasdvdvaeasplvgpvrrgvrvtdspfplrdddkdchvDKEAEEFIKKFYQQLRLQKWNAAREAAATLYG
Flexible Loop (DISEMBL)
mearppviakklgrmvRVILFMIQkgitkskfIGKALNDAVLYDYGAITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHHAKDNKRQAASAAVAGCYREDDDVAASDVDVaeasplvgpvrrgvrvtdspfplrdddkdcHVDKEAEEFIKKFYQQLRLQKWNAAREAAATLYG
Low Complexity Region (SEG)
MEARPPVIAKKLGRMVRVILFMIQKGITKSKFIGKALNDAVLYDYGAITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHHAKDNKRQAASAAVAGCYRedddvaasdvdvaeasPLvgpvrrgvrvTDSPFPLRDDDKDCHVDKEAEEFIKKFYQQLRLQKWNAAREAAATLYG
Disordered region (IsUnstruct)
*******IAKKLGRMVRVILFMIQKGITKSKFIGKALNDAVLYDYGAITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHHA*********AAVAGCYRE***************************************************************************
Disordered Region (DISOPRED)
******V***KLGRMVRVILFMIQKGITKSKFIGKALNDAV************************EF***NSP****************************ASAAVAGCYRE******************************PFPLRDDDKDCHVDKEAEEFIKKFYQQLRLQK*************
Disordered Region (DISEMBL)
MEARPPVIAKKLGRMVRVILFMIQKGITKSKFIGKALNDAVLYDYGAITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHH*************AGCYREDDDVAASDVDVAEASPLVGPVRRGVRVTDSPFPLRDDDKDCHVDKEAEEFIKKFYQQLRLQKWNAAR********
Disordered Region (DISPRO)
***RPPVIAKKLGRMVRVILFMIQKGITKSKFIGKALNDAVLYDYGAITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPS**************NKRQAASAAVAGCYREDD******VDVAEASPLVGPVRRGVRVTDSPFPLRDDDKDCHVDKEAEEFIKKFYQQLRLQKWNAAREAAA****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEARPPVIAKKLGRMVRVILFMIQKGITKSKFIGKALNDAVLYDYGAITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHHAKDNKRQAASAAVAGCYREDDDVAASDVDVAEASPLVGPVRRGVRVTDSPFPLRDDDKDCHVDKEAEEFIKKFYQQLRLQKWNAAREAAATLYG
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
118489911	199	unknown [Populus trichocarpa x Populus d	0.919	0.864	0.475	2e-39
224092270	199	predicted protein [Populus trichocarpa]	0.919	0.864	0.480	2e-39
225429353	213	PREDICTED: uncharacterized protein LOC10	0.935	0.821	0.462	4e-38
224141715	183	predicted protein [Populus trichocarpa]	0.834	0.852	0.473	4e-33
225445114	201	PREDICTED: uncharacterized protein LOC10	0.919	0.855	0.425	3e-32
388510770	209	unknown [Lotus japonicus]	0.930	0.832	0.398	8e-31
147768061	208	hypothetical protein VITISV_030073 [Viti	0.919	0.826	0.394	2e-27
225442493	208	PREDICTED: uncharacterized protein LOC10	0.919	0.826	0.394	3e-27
255546355	206	conserved hypothetical protein [Ricinus	0.930	0.844	0.399	3e-26
224142201	209	predicted protein [Populus trichocarpa]	0.844	0.755	0.382	2e-24

>gi|118489911|gb|ABK96753.1| unknown [Populus trichocarpa x Populus deltoides]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/206 (47%), Positives = 125/206 (60%), Gaps = 34/206 (16%)

Query: 1   MEARPPVIAKKLGRMVRVILFMIQKGITKSKF-------------IGKALNDAVLYDYGA 47
           MEA PP+ AKK+  M+R+I  M+QKG+ KSK              + KALND ++  +  
Sbjct: 1   MEAGPPLTAKKVCNMLRLIFLMMQKGMLKSKLMLDLHFLMKRGKILRKALNDIMVQQHNT 60

Query: 48  ITCRSHDMHASFVCPREYEFSCSNSPAYQ--PYVIPSLHVSRRKILHHAKDNKRQAASAA 105
           ++C SHD+H SF+ PREYEFSCS SPAY+   Y  P     RRK+  H K  +  A S  
Sbjct: 61  LSCISHDVHMSFISPREYEFSCSGSPAYKFYSYKQPYYQAKRRKLHAHYKHTRVHAPSLG 120

Query: 106 VAGCYREDDDVAASDV--DVA-EASPLVG---------PVRRGVRVTDSPFPLRDDDKDC 153
                   DD+A+S    DVA EASPLVG         P+ R VR+TDSPF +RD D+DC
Sbjct: 121 -------GDDMASSSCGGDVAVEASPLVGSAGWFGTWSPMVRQVRITDSPFTMRDADEDC 173

Query: 154 HVDKEAEEFIKKFYQQLRLQKWNAAR 179
            VD+EAEEFI+ FY++LRLQK  AAR
Sbjct: 174 QVDREAEEFIEMFYKELRLQKGVAAR 199

Source: Populus trichocarpa x Populus deltoides

Species: Populus trichocarpa x Populus deltoides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092270|ref|XP_002309536.1| predicted protein [Populus trichocarpa] gi|222855512|gb|EEE93059.1| predicted protein [Populus trichocarpa]

 Score =  167 bits (422), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/206 (48%), Positives = 125/206 (60%), Gaps = 34/206 (16%)

Query: 1   MEARPPVIAKKLGRMVRVILFMIQKGITKSKF-------------IGKALNDAVLYDYGA 47
           MEA PP+ AKK+  M+R+I  M+QKG+ KSK              + KALND ++  +  
Sbjct: 1   MEAGPPLTAKKVCNMLRLIFLMMQKGMLKSKLMLDLHFLMKRGKILRKALNDIMVQQHNT 60

Query: 48  ITCRSHDMHASFVCPREYEFSCSNSPAYQ--PYVIPSLHVSRRKILHHAKDNKRQAASAA 105
           ++C SHD++ SF+ PREYEFSCS SPAY+   Y  P     RRK+  H K  +  A S  
Sbjct: 61  LSCISHDVNMSFISPREYEFSCSGSPAYKFYSYKQPYYQAKRRKLHAHYKHTRVHAPSLG 120

Query: 106 VAGCYREDDDVAASDV--DVA-EASPLVG---------PVRRGVRVTDSPFPLRDDDKDC 153
                   DDVA+S    DVA EASPLVG         P+ R VR+TDSPF +RD D+DC
Sbjct: 121 -------GDDVASSSCGGDVAVEASPLVGSAGWFGTWSPMVRQVRITDSPFTMRDADEDC 173

Query: 154 HVDKEAEEFIKKFYQQLRLQKWNAAR 179
            VDKEAEEFI+ FY++LRLQK  AAR
Sbjct: 174 QVDKEAEEFIEMFYKELRLQKGMAAR 199

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429353|ref|XP_002277677.1| PREDICTED: uncharacterized protein LOC100250983 [Vitis vinifera] gi|296081560|emb|CBI20565.3| unnamed protein product [Vitis vinifera]

 Score =  162 bits (411), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/216 (46%), Positives = 132/216 (61%), Gaps = 41/216 (18%)

Query: 1   MEARPPVIAKKLGRMVRVILFMIQKGITKSKF--------------IGKALNDAVLYDYG 46
           ME+ PPV+ KKL   VR++LFM++KG+TKSK               +GK +N+ +L  + 
Sbjct: 1   MESIPPVVTKKLLNTVRIVLFMLRKGLTKSKLMIDLCQIIMKCGKILGKEVNELMLRHHT 60

Query: 47  ---AITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHHAKDNKRQAAS 103
              +++CRS D+H SFV P +YEFSCSNSPAY P+     H+++RK       + R    
Sbjct: 61  TLDSLSCRSRDLHMSFVSPHDYEFSCSNSPAY-PF-----HLTKRKAHFTYTFSNRPRHH 114

Query: 104 AAVAGCYREDDDVAASDV----------DVAEASPLVG------PVR-RGVRVTDSPFPL 146
            A       D+DVAA  V          DVA ASPL+G      PV  R +RVTDSPFPL
Sbjct: 115 YARYHAPTADNDVAAVTVMKTMLEMLSGDVA-ASPLMGAAFGRSPVAVRQLRVTDSPFPL 173

Query: 147 RDDDKDCHVDKEAEEFIKKFYQQLRLQKWNAAREAA 182
           +DDD DCHVDK A+EFI++FY++LR QKW AA+EAA
Sbjct: 174 KDDDVDCHVDKAADEFIERFYKELRRQKWKAAQEAA 209

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141715|ref|XP_002324210.1| predicted protein [Populus trichocarpa] gi|222865644|gb|EEF02775.1| predicted protein [Populus trichocarpa]

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/190 (47%), Positives = 113/190 (59%), Gaps = 34/190 (17%)

Query: 22  MIQKGITKSK-------------FIGKALNDAVLYDYGAITCRSHDMHASFVCPREYEFS 68
           MIQKG+ KSK              +GKALND ++  +  ++C SHD+H SF+ PREYEFS
Sbjct: 1   MIQKGMLKSKVMLDLHFLMRRGKILGKALNDIMVQQHNTLSCISHDVHMSFISPREYEFS 60

Query: 69  CSNSPAYQ--PYVIPSLHVSRRKILHHAKDNKRQAASAAVAGCYREDDDVAASDV--DVA 124
           CS SPAY+   Y  P     RR +  H K  + QA S  V       DDV +S+   DVA
Sbjct: 61  CSGSPAYKFYSYKQPYYQARRRSLHAHYKHTRFQAPSHDV-------DDVVSSNGGGDVA 113

Query: 125 -EASPLVG---------PVRRGVRVTDSPFPLRDDDKDCHVDKEAEEFIKKFYQQLRLQK 174
            EASP VG         P+ R VR+TDSPF +RD D+DCHVD EAE+FI+ FY++LRLQK
Sbjct: 114 VEASPSVGSARWFGTWSPLVRQVRITDSPFTMRDADEDCHVDTEAEKFIEMFYKELRLQK 173

Query: 175 WNAAREAAAT 184
             AA + AA 
Sbjct: 174 RMAAHDRAAV 183

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445114|ref|XP_002283815.1| PREDICTED: uncharacterized protein LOC100266427 [Vitis vinifera]

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/200 (42%), Positives = 120/200 (60%), Gaps = 28/200 (14%)

Query: 1   MEARPPVIAKKLGRMVRVILFMIQKGITKSKFI-------------GKALNDAVLYDYGA 47
           +E  PP IAKKL  +VRV LFM++KGI+K K +             GKAL + + + + +
Sbjct: 3   VEPTPPAIAKKLWNIVRVALFMLRKGISKRKLMVDLHLMFKRGKIAGKALGNLMFHHHSS 62

Query: 48  ITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHHAKDNKRQAASAAVA 107
           ++CRS+D   SFV P+EYEFSCSNSPAY P+  P   +++RK  HH+          AV 
Sbjct: 63  LSCRSNDA-LSFVSPKEYEFSCSNSPAY-PFHYP-FQLNKRKRHHHSTRYDDVTTVCAVQ 119

Query: 108 GCYREDDDVAASDVDVAEASPLV------GPVRRGVRVTDSPFPLRDDDKDCHVDKEAEE 161
                 ++      ++ EASPL        P+ R +RVTDSPFP++D D+D  VDK AEE
Sbjct: 120 RVLEMLNN------EMVEASPLTLPGFGRSPMVRQLRVTDSPFPIKDTDEDPQVDKAAEE 173

Query: 162 FIKKFYQQLRLQKWNAAREA 181
           FI+KF++ L+LQK  +A E+
Sbjct: 174 FIRKFHKDLKLQKMMSALES 193

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388510770|gb|AFK43451.1| unknown [Lotus japonicus]

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 111/201 (55%), Gaps = 27/201 (13%)

Query: 1   MEARPPVIAKKLGRMVRVILFMIQKGITKS--------------KFIGKALNDAVLY--D 44
           +E   PV+AKKL  MVRV+ FM++KGI KS              K  GKA+ + +++   
Sbjct: 3   IEGSQPVVAKKLWNMVRVLFFMLRKGIAKSRVMVDFHHLMLKRGKLAGKAIANTLMFHHQ 62

Query: 45  YGAITCRSHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHHAKDNKRQAASA 104
           Y A+ CRSH+ H S   PREYEFSCSNSP +QP    +          ++K + +    +
Sbjct: 63  YAALACRSHNTHLSVFSPREYEFSCSNSPVFQP----TKRRRHHHHHRYSKPSSQYDDFS 118

Query: 105 AVAGCYREDDDVAASDVDVAEASPLV-------GPVRRGVRVTDSPFPLRDDDKDCHVDK 157
             +   +  + +    V+V  +SPLV        PV R +RVTDSPFPL+D+  D  VD 
Sbjct: 119 TYSAVQKVLEMLNNDKVEVDSSSPLVTLPGFGKSPVCRQLRVTDSPFPLKDESGDSQVDV 178

Query: 158 EAEEFIKKFYQQLRLQKWNAA 178
           E EEFIK+FY+ L LQK + A
Sbjct: 179 EVEEFIKRFYKDLNLQKRSMA 199

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147768061|emb|CAN64915.1| hypothetical protein VITISV_030073 [Vitis vinifera]

 Score =  127 bits (319), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 112/203 (55%), Gaps = 31/203 (15%)

Query: 1   MEARPPVIAKKLGRMVRVILFMIQKGITKSKFI-------------GKALNDAVLYDYGA 47
           ME   P IAK+L  +VRV+ FM++KGI+K K +             GKA+ + + + + +
Sbjct: 9   MEPNLPXIAKRLWGIVRVMFFMLRKGISKRKLLLDLNMMMKRGKIAGKAIGNLMFHHHSS 68

Query: 48  ITCR-SHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHH-----------AK 95
              R S D H SF  PREYEFSCSNSPAY PY  P  + ++RK  HH             
Sbjct: 69  SAARRSADGHISFAAPREYEFSCSNSPAY-PYHFP-FNFNKRKHNHHNIFSCVFQTPPTS 126

Query: 96  DNKRQAASAAVAGCYREDDDVAASDVDVAEASPLVGPVRRGVRVTDSPFPLRDDDKDCHV 155
           D+     +A  A     + +VA+  +     SP+V    R +R+TDSPFPL+D D+D  V
Sbjct: 127 DDDFTTVNAVKAVLEMLNSEVASPALPGFGRSPMV----RQLRITDSPFPLKDIDEDSEV 182

Query: 156 DKEAEEFIKKFYQQLRLQKWNAA 178
           DK AEEFI++FY  L+ QK + +
Sbjct: 183 DKAAEEFIERFYNDLKKQKMDGS 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442493|ref|XP_002283976.1| PREDICTED: uncharacterized protein LOC100248099 [Vitis vinifera]

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/203 (39%), Positives = 112/203 (55%), Gaps = 31/203 (15%)

Query: 1   MEARPPVIAKKLGRMVRVILFMIQKGITKSKFI-------------GKALNDAVLYDYGA 47
           ME   P IAK+L  +VRV+ FM++KGI+K K +             GKA+ + + + + +
Sbjct: 9   MEPNLPGIAKRLWGIVRVMFFMLRKGISKRKLLLDLNMMMKRGKIAGKAIGNLMFHHHSS 68

Query: 48  ITCR-SHDMHASFVCPREYEFSCSNSPAYQPYVIPSLHVSRRKILHH-----------AK 95
              R S D H SF  PREYEFSCSNSPAY PY  P  + ++RK  HH             
Sbjct: 69  SAARRSADGHISFAAPREYEFSCSNSPAY-PYHFP-FNFNKRKHNHHNIFSCVFQTPPTS 126

Query: 96  DNKRQAASAAVAGCYREDDDVAASDVDVAEASPLVGPVRRGVRVTDSPFPLRDDDKDCHV 155
           D+     +A  A     + +VA+  +     SP+V    R +R+TDSPFPL+D D+D  V
Sbjct: 127 DDDFTTVNAVKAVLEMLNSEVASPALPGFGRSPMV----RQLRITDSPFPLKDIDEDSEV 182

Query: 156 DKEAEEFIKKFYQQLRLQKWNAA 178
           DK AEEFI++FY  L+ QK + +
Sbjct: 183 DKAAEEFIERFYNDLKKQKMDGS 205

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255546355|ref|XP_002514237.1| conserved hypothetical protein [Ricinus communis] gi|223546693|gb|EEF48191.1| conserved hypothetical protein [Ricinus communis]

 Score =  123 bits (309), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 114/203 (56%), Gaps = 29/203 (14%)

Query: 1   MEARPPVIAKKLGRMVRVILFMIQKGITKS--------------KFIGKALNDAVLY-DY 45
           +EA  P +AKKL  +VR + FM++KGI+KS              K  GKA+ + V + ++
Sbjct: 3   VEASTPEVAKKLWHIVRAVFFMLRKGISKSRIMVDLHLMLKRGNKLAGKAIGNLVYHHNH 62

Query: 46  GAITCRSHDMHASFVCPREYEFSCSNSPA-YQPYVIPSLHVSRRKILHHAKDNKRQAASA 104
            + +CRS+D   +F+ PREYEFSCSNSPA + P+               +         A
Sbjct: 63  SSFSCRSNDA-LNFISPREYEFSCSNSPATFYPFSAHKRKHHHHLHFTKSYKYNDVTTVA 121

Query: 105 AVAGCYREDDDVAASDVDVAEASPLV------GPVRRGVRVTDSPFPLRDDDKDCHVDKE 158
           AV        ++  ++V V EASP+V       P+ R +R+TDSPFPL+D+  D  VDK 
Sbjct: 122 AVQKML----EMLNNEVQV-EASPMVLPGFGKSPMVRQLRITDSPFPLKDEG-DSQVDKA 175

Query: 159 AEEFIKKFYQQLRLQKWNAAREA 181
           AEEFIKKFY+ L+LQK  AA E+
Sbjct: 176 AEEFIKKFYKDLKLQKTVAALES 198

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142201|ref|XP_002324447.1| predicted protein [Populus trichocarpa] gi|222865881|gb|EEF03012.1| predicted protein [Populus trichocarpa]

 Score =  117 bits (293), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 109/212 (51%), Gaps = 54/212 (25%)

Query: 3   ARPPVIAKKLGRMVRVILFMIQKGITKS--------------KFIGKALNDAVLYDY--G 46
           A  P + KKL  +VRVI +M++K I+KS              K   KA+ + + ++Y   
Sbjct: 4   ASTPEMGKKLWHIVRVIFYMVRKSISKSRIMVDLHLMLKRGNKLAEKAICNLMFHNYHHS 63

Query: 47  AITCRSHDMHASFVCPREYEFSCSNSPA-YQPYVIPSLHVSRRKILHHAKDNKRQAASAA 105
           + +CRS+D   SF+ PREYEFSCSNSPA + P+                  +KR+     
Sbjct: 64  SFSCRSNDA-LSFISPREYEFSCSNSPANFNPFYT----------------HKRKHQLNL 106

Query: 106 VAGCYREDDDVAASDV-------------DVAEASPLV------GPVRRGVRVTDSPFPL 146
            A  Y+ DD   A+ V                EASPL        P+ R +R+TDSPFPL
Sbjct: 107 FAKSYKYDDVTTAAAVQKMLEMLNNPEVASAVEASPLSLPGFGKSPMVRQLRITDSPFPL 166

Query: 147 RDDDKDCHVDKEAEEFIKKFYQQLRLQKWNAA 178
           +D+  D  VDK AEEFIKKFY+ L+LQK  AA
Sbjct: 167 KDEG-DSQVDKAAEEFIKKFYKDLKLQKTAAA 197

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	187
TAIR|locus:2134118	199	AT4G32860 "AT4G32860" [Arabido	0.160	0.150	0.666	2.2e-19
TAIR|locus:2094932	205	AT3G16330 "AT3G16330" [Arabido	0.187	0.170	0.648	1.4e-14
TAIR|locus:2119911	200	AT4G29110 "AT4G29110" [Arabido	0.887	0.83	0.318	9.1e-13
TAIR|locus:2034071	208	AT1G52140 "AT1G52140" [Arabido	0.187	0.168	0.578	2.6e-12

TAIR|locus:2134118 AT4G32860 "AT4G32860" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
 Identities = 20/30 (66%), Positives = 25/30 (83%)

Query:   151 KDCHVDKEAEEFIKKFYQQLRLQKWNAARE 180
             + CHVD+ AEEFI+ FY+QLRLQKW  A+E
Sbjct:   169 ESCHVDRAAEEFIQSFYRQLRLQKWMMAQE 198

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009691 "cytokinin biosynthetic process" evidence=RCA

TAIR|locus:2094932 AT3G16330 "AT3G16330" [Arabidopsis thaliana (taxid:3702)]

 Score = 112 (44.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
 Identities = 24/37 (64%), Positives = 28/37 (75%)

Query:   140 TDSPFPLRD--DDKDCHVDKEAEEFIKKFYQQLRLQK 174
             TDSPFPLR+  D  + HVDK A+EFIKKFY+ L  QK
Sbjct:   161 TDSPFPLREEGDVANGHVDKAADEFIKKFYKNLYQQK 197

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0052542 "defense response by callose deposition" evidence=RCA

TAIR|locus:2119911 AT4G29110 "AT4G29110" [Arabidopsis thaliana (taxid:3702)]

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 57/179 (31%), Positives = 81/179 (45%)

Query:     1 MEARPPVIAKKLGRMVRVILFMIQKGITKSKFIGKALNDAVLYDYGAITCRSHDMHASFV 60
             ME    V AK+L ++VR++  +++ G  K+K +   LN  +     AIT    ++     
Sbjct:    14 MEQNAQVAAKRLWKVVRIVFCVLKTGTVKNKLM-LDLNLMLKRGNKAIT----NLRRRSS 68

Query:    61 CPREYEFSCSNSPA-YQPYVIPSLHVSRRKILHHAKDNKRQAASAAVAGCYRXXXXXXXX 119
                 ++ S S+    Y P+   S    R++ +H   DN+  A  AAV   +         
Sbjct:    69 STGSHDVSSSSRVRDYDPFAFIS---KRKRRVHGGYDNEEDAVEAAVKKVFELLGENDKK 125

Query:   120 XXXXXXX--XPLXXX-XXXXXXXTDSPFPLRDD-DKDCHVDKEAEEFIKKFYQQLRLQK 174
                       PL           TDSPFPL D  D D  VDK AEEFIKKFY+ L+LQK
Sbjct:   126 TVATESARESPLIMSPAVRQLRVTDSPFPLDDGGDHDHVVDKAAEEFIKKFYKNLKLQK 184

GO:0003674 "molecular_function" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0010200 "response to chitin" evidence=IEP

TAIR|locus:2034071 AT1G52140 "AT1G52140" [Arabidopsis thaliana (taxid:3702)]

 Score = 106 (42.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
 Identities = 22/38 (57%), Positives = 27/38 (71%)

Query:   140 TDSPFPLRDDDKDC---HVDKEAEEFIKKFYQQLRLQK 174
             TDSPFPL  ++ D    HVDK A++FIKKFY+ L  QK
Sbjct:   165 TDSPFPLTPENGDVANGHVDKAADDFIKKFYKNLNQQK 202

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00061694 hypothetical protein (200 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	187
pfam05553	38	pfam05553, DUF761, Cotton fibre expressed protein	6e-07

>gnl|CDD|218633 pfam05553, DUF761, Cotton fibre expressed protein

 Score = 44.1 bits (105), Expect = 6e-07
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 154 HVDKEAEEFIKKFYQQLRLQKWNAAREAAATLYG 187
            VD+ AEEFI +F +QLRLQ+  + +     L  
Sbjct: 4   EVDRRAEEFIARFREQLRLQRQESLKRYQEMLAR 37

This family consists of several plant proteins of unknown function. Three of the sequences (from Gossypium hirsutum) in this family are described as cotton fibre expressed proteins. The remaining sequences, found in Arabidopsis thaliana, are uncharacterized. Length = 38

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	187
PF05553	38	DUF761: Cotton fibre expressed protein; InterPro:	99.47

>PF05553 DUF761: Cotton fibre expressed protein; InterPro: IPR008480 This family consists of several plant proteins of unknown function

Probab=99.47  E-value=4.9e-14  Score=91.20  Aligned_cols=35  Identities=46%  Similarity=0.600  Sum_probs=33.3

Q ss_pred             cchhhHHHHHHHHHHHHHHhhhHHHHhhhhHhhhc
Q 046669          152 DCHVDKEAEEFIKKFYQQLRLQKWNAAREAAATLY  186 (187)
Q Consensus       152 ~~~vD~~Ae~FI~~Fy~qlr~Q~~~s~~~~~e~~~  186 (187)
                      +++||.+||+||++||+|||||++.|+.+|+|||.
T Consensus         2 ~~evd~rAe~FI~~f~~qlrlqr~~S~~ry~eml~   36 (38)
T PF05553_consen    2 DDEVDRRAEEFIAKFREQLRLQRQESLQRYQEMLA   36 (38)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            56899999999999999999999999999999985

Three of the sequences from Gossypium hirsutum (Upland cotton) in this family are described as G. hirsutum fibre expressed proteins []. The remaining sequences, found in Arabidopsis thaliana, are uncharacterised.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00