Citrus Sinensis ID: 046673

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------
MSQIHQSFLVLTFFCCLALLSQSHFTASKSDGLIRLQLIPVDSLEPQNLNESQKFHGLVEKSKRRASYLKSISTLNSSVLNPSDTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVCKGPK
cccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccEEEEccccccccccccccccccccccccccccccccccccccccccccccEEEEEccccccEEEEEEEEEEEEccccccccEEEEcEEccccccccccccccEEEEccccccHHHHHHcccccccEEEEEEcccccccEEcccccccccccccccEEEccccccccEEEEEEEEEEccEEEccccccccccccccccccEEEEcccccEEcccHHHHHHHHHHHHHHHHccccccccccccccEEEccccccccccEEEEEEccEEEcccccEEEEEcccccEEEEEEEccccccEEEcEEEEEEEEEEEccccEEEEEEccccccc
cHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcHHEEEcccHHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccccccEEEEEEEEccccccEEEEEEccccccEEccccccccHccccccccccccccccccccccHHHHccccccccccccEEEEEEcccccccEEEEEEEEEEccEEEcccEEEEEcccccccEEEEEccccEEEccccccccEHHHcccccccEEEEEEcccccccEEEEcccccccccccEEEEEEcccccccEEEEEEcEEEEccEEEEccccHHHHccHcccccEEEEEccccEEcccHHHHHHHHHHHHHHHHcccccccccccEEEEccccccccccccEEEEEEccEcccccHHHEEEEEccccEEEEEEccccccEEEEEcEEEccEEEEEEcccccEEEEcccccccc
MSQIHQSFLVLTFFCCLALLsqshftasksdglirlqlipvdslepqnlnesqkFHGLVEKSKRRASYLKSISTLnssvlnpsdtipitmntqssLYFVNigigrpitqepllvdtasdliwtqcqpcincfpqtfpiydprqsatygrlpcndplcennrefscvndvcvyderyangastkgiasedlffffpdsipeflvfgcsddnqgfpfgpdnrisgilglsmsplslisqiggdinhkfSYCLvyplasstltfgdvdtsglpiqstpfvtphapgysnyyLNLIDVsigthrmmfppntfAIRDVERGlggcimdsgsaftsmertpYRQVLEQFMAYFERFHLIRVQTATGFelcyrqdpnftdypsmtlhfqgadwplpkeYVYIFNTAGEKYFCVAllpddrltiIGAYHQQNVLVIYDVGnnrlqfapvvckgpk
MSQIHQSFLVLTFFCCLALLSQSHFTASKSDGLIRLQLIPVDSLEPQNLNESQKFHGLVEKSKRRASYLKSIStlnssvlnpsdTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVCKGPK
MSQIHQSFLVLTFFCCLALLSQSHFTASKSDGLIRLQLIPVDSLEPQNLNESQKFHGLVEKSKRRASYLKSISTLNSSVLNPSDTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVCKGPK
*****QSFLVLTFFCCLALLSQSHFTASKSDGLIRLQLIPVD*****************************************DTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVC****
*****QS*LVLTFFCCLALLSQ*******************************************************************MNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTF*IY****SA**GRLPCND**************VCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYP************TSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMA*************TGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVC****
MSQIHQSFLVLTFFCCLALLSQSHFTASKSDGLIRLQLIPVDSLEPQNLNESQKFHGLVEKSKRRASYLKSISTLNSSVLNPSDTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVCKGPK
*SQIHQSFLVLTFFCCLALLSQSHFTASKSDGLIRLQLIPVDSLEPQNLNESQKFHGLVEKSKRRASYLKSISTLNS***NPSDTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVC****
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSQIHQSFLVLTFFCCLALLSQSHFTASKSDGLIRLQLIPVDSLEPQNLNESQKFHGLVEKSKRRASYLKSISTLNSSVLNPSDTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLASSTLTFGDVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVCKGPK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query447 2.2.26 [Sep-21-2011]
Q766C3437 Aspartic proteinase nepen N/A no 0.879 0.899 0.337 8e-56
Q766C2438 Aspartic proteinase nepen N/A no 0.859 0.876 0.316 1e-50
Q6XBF8437 Aspartic proteinase CDR1 no no 0.762 0.780 0.322 6e-36
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.926 0.880 0.286 6e-35
Q3EBM5447 Probable aspartic proteas no no 0.738 0.738 0.302 6e-33
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.912 0.816 0.285 4e-32
Q9S9K4475 Aspartic proteinase-like no no 0.825 0.776 0.253 3e-23
Q9LZL3453 Aspartic proteinase PCS1 no no 0.720 0.710 0.271 1e-22
Q9LX20528 Aspartic proteinase-like no no 0.838 0.710 0.226 2e-13
Q0IU52410 Aspartic proteinase Asp1 no no 0.724 0.790 0.238 1e-12
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function desciption
 Score =  218 bits (555), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 145/430 (33%), Positives = 229/430 (53%), Gaps = 37/430 (8%)

Query: 24  HFTASKSDGLIRLQLIPVDSLEPQNLNESQKFHGLVEKSKRRASYLKSISTLNSSVLNPS 83
           H   +K  G  ++ L  VDS   +NL + Q     +E+  RR   L+++       LN  
Sbjct: 32  HRHEAKVTGF-QIMLEHVDS--GKNLTKFQLLERAIERGSRRLQRLEAM-------LNGP 81

Query: 84  DTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQ 143
             +  ++      Y +N+ IG P      ++DT SDLIWTQCQPC  CF Q+ PI++P+ 
Sbjct: 82  SGVETSVYAGDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQG 141

Query: 144 SATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLV 203
           S+++  LPC+  LC+     +C N+ C Y   Y +G+ T+G    +   F   SIP  + 
Sbjct: 142 SSSFSTLPCSSQLCQALSSPTCSNNFCQYTYGYGDGSETQGSMGTETLTFGSVSIPN-IT 200

Query: 204 FGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPLASST---LT 260
           FGC ++NQGF  G     +G++G+   PLSL SQ+  D+  KFSYC+  P+ SST   L 
Sbjct: 201 FGCGENNQGFGQGNG---AGLVGMGRGPLSLPSQL--DVT-KFSYCMT-PIGSSTPSNLL 253

Query: 261 FGDVD---TSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGL 317
            G +    T+G P  +T   +   P +  YY+ L  +S+G+ R+   P+ FA+     G 
Sbjct: 254 LGSLANSVTAGSP-NTTLIQSSQIPTF--YYITLNGLSVGSTRLPIDPSAFALNS-NNGT 309

Query: 318 GGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQ-TATGFELCYR--QDPNFTDY 374
           GG I+DSG+  T      Y+ V ++F++   + +L  V  +++GF+LC++   DP+    
Sbjct: 310 GGIIIDSGTTLTYFVNNAYQSVRQEFIS---QINLPVVNGSSSGFDLCFQTPSDPSNLQI 366

Query: 375 PSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLPDDR-LTIIGAYHQQNVLVIYDVGN 433
           P+  +HF G D  LP E  +I  + G    C+A+    + ++I G   QQN+LV+YD GN
Sbjct: 367 PTFVMHFDGGDLELPSENYFISPSNG--LICLAMGSSSQGMSIFGNIQQQNMLVVYDTGN 424

Query: 434 NRLQFAPVVC 443
           + + FA   C
Sbjct: 425 SVVSFASAQC 434
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake.
Nepenthes gracilis (taxid: 150966)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: 1EC: 2
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|Q0IU52|ASP1_ORYSJ Aspartic proteinase Asp1 OS=Oryza sativa subsp. japonica GN=ASP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query447
255563741448 Aspartic proteinase nepenthesin-2 precur 0.937 0.935 0.404 3e-67
326494754449 predicted protein [Hordeum vulgare subsp 0.816 0.812 0.320 2e-56
242073260452 hypothetical protein SORBIDRAFT_06g01817 0.874 0.865 0.330 1e-55
357167693468 PREDICTED: aspartic proteinase nepenthes 0.937 0.895 0.331 3e-55
61214233437 RecName: Full=Aspartic proteinase nepent 0.879 0.899 0.337 6e-54
242079447441 hypothetical protein SORBIDRAFT_07g02278 0.876 0.888 0.348 2e-52
357158688443 PREDICTED: aspartic proteinase nepenthes 0.847 0.855 0.349 2e-52
38344829444 OSJNBa0064H22.10 [Oryza sativa Japonica 0.791 0.797 0.333 2e-52
224286173383 unknown [Picea sitchensis] 0.816 0.953 0.356 2e-52
116790042460 unknown [Picea sitchensis] 0.870 0.845 0.337 2e-52
>gi|255563741|ref|XP_002522872.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] gi|223537956|gb|EEF39570.1| Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  262 bits (669), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 181/448 (40%), Positives = 247/448 (55%), Gaps = 29/448 (6%)

Query: 14  FCCLALLSQSHFTASKSDGLIRLQLIPVDSLE----PQNLNESQKFHGLVEKSKRRASYL 69
           F  L +LS  HF  SK DG   L+++   S E    P N+ + ++   LVE SK RA   
Sbjct: 9   FVYLTILSLIHFAISKPDGF-SLEIVHRYSRESPFYPGNITDYERITRLVELSKIRA--- 64

Query: 70  KSISTLNSSVLNPSDTIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCI 129
            +++   SS  +P +   + ++   + Y V + IG P     L+ DT S L WTQC+PC 
Sbjct: 65  HNLAITTSSGFSP-EAFRLRISQDDTCYLVKVIIGSPGVPLYLVPDTGSGLFWTQCEPCT 123

Query: 130 NCFPQTFPIYDPRQSATYGRLPCNDPLCENNRE-FSCVNDVCVYDERYANGASTKGIASE 188
             F Q  PI++   S TY  LPC    C NN+  F C +D CVY   YA G++T G+A++
Sbjct: 124 RRFRQLPPIFNSTASRTYRDLPCQHQFCTNNQNVFQCRDDKCVYRIAYAGGSATAGVAAQ 183

Query: 189 DLFFFFP-DSIPEFLVFGCSDDNQGFP-FGPDNRISGILGLSMSPLSLISQIGGDINHKF 246
           D+      D IP    FGCS DNQ F  F    +  GI+GL+MSP+SL+ Q+     ++F
Sbjct: 184 DILQSAENDRIP--FYFGCSRDNQNFSTFESSGKGGGIIGLNMSPVSLLQQMNHITKNRF 241

Query: 247 SYCL-VYPL-----ASSTLTFG-DVDTSGLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTH 299
           SYCL ++ L     A+S L FG D+  S     STPFV+P   G  NY+LNLIDVS+  +
Sbjct: 242 SYCLNLFDLSSPSHATSLLRFGNDIRKSRRKYLSTPFVSPR--GMPNYFLNLIDVSVAGN 299

Query: 300 RMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTAT 359
           RM  PP TFA++    G GG I+DSG+A T + +T Y  V+  F  YF++    RV    
Sbjct: 300 RMQIPPGTFALK--PDGTGGTIIDSGTAVTYISQTAYFPVITAFKNYFDQHGFQRVNIQL 357

Query: 360 GFELCYRQDPN-FTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVALLP--DDRLTI 416
              +CY+Q  + F +YPSM  HFQGAD+ +  EYVY+        FCVAL P    + TI
Sbjct: 358 SGYICYKQQGHTFHNYPSMAFHFQGADFFVEPEYVYL-TVQDRGAFCVALQPISPQQRTI 416

Query: 417 IGAYHQQNVLVIYDVGNNRLQFAPVVCK 444
           IGA +Q N   IYD  N +L F P  C+
Sbjct: 417 IGALNQANTQFIYDAANRQLLFTPENCQ 444

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|326494754|dbj|BAJ94496.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326514480|dbj|BAJ96227.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|242073260|ref|XP_002446566.1| hypothetical protein SORBIDRAFT_06g018170 [Sorghum bicolor] gi|241937749|gb|EES10894.1| hypothetical protein SORBIDRAFT_06g018170 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|357167693|ref|XP_003581287.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|61214233|sp|Q766C3.1|NEP1_NEPGR RecName: Full=Aspartic proteinase nepenthesin-1; AltName: Full=Nepenthesin-I; Flags: Precursor gi|41016421|dbj|BAD07474.1| aspartic proteinase nepenthesin I [Nepenthes gracilis] Back     alignment and taxonomy information
>gi|242079447|ref|XP_002444492.1| hypothetical protein SORBIDRAFT_07g022780 [Sorghum bicolor] gi|241940842|gb|EES13987.1| hypothetical protein SORBIDRAFT_07g022780 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|357158688|ref|XP_003578209.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|38344829|emb|CAD40873.2| OSJNBa0064H22.10 [Oryza sativa Japonica Group] gi|116310063|emb|CAH67084.1| H0818E04.1 [Oryza sativa Indica Group] gi|116310186|emb|CAH67198.1| OSIGBa0152K17.10 [Oryza sativa Indica Group] Back     alignment and taxonomy information
>gi|224286173|gb|ACN40797.1| unknown [Picea sitchensis] Back     alignment and taxonomy information
>gi|116790042|gb|ABK25480.1| unknown [Picea sitchensis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query447
TAIR|locus:2056916461 AT2G03200 [Arabidopsis thalian 0.930 0.902 0.324 3.6e-50
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.908 0.837 0.319 6e-48
TAIR|locus:2010786431 AT1G64830 [Arabidopsis thalian 0.917 0.951 0.334 5.4e-47
TAIR|locus:2031225483 AT1G25510 [Arabidopsis thalian 0.798 0.739 0.331 2e-45
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.914 0.935 0.316 1.3e-43
TAIR|locus:2095365470 AT3G20015 [Arabidopsis thalian 0.926 0.880 0.293 3.2e-42
TAIR|locus:2183715464 AT5G10760 [Arabidopsis thalian 0.800 0.771 0.319 2.6e-40
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.899 0.832 0.295 3.3e-40
TAIR|locus:2206184445 AT1G31450 [Arabidopsis thalian 0.932 0.937 0.291 4.3e-38
TAIR|locus:2126505427 AT4G30040 [Arabidopsis thalian 0.890 0.932 0.307 5.5e-38
TAIR|locus:2056916 AT2G03200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 151/465 (32%), Positives = 228/465 (49%)

Query:     8 FLVLTFFCCLALLSQSHF-----TASKS---DGLIRLQLIPVDSLEPQNLNESQKFHGLV 59
             FL+L  F CL  +S S       T  K+    G  RL L  VDS   +NL + QK    +
Sbjct:    14 FLIL--FSCLISVSSSRRSLIDRTLPKNLPRSGF-RLSLRHVDS--GKNLTKIQKIQRGI 68

Query:    60 EKSKRRASYLKSISTLNSSVLNPSDTIPITMNTQ--SSLYFVNIGIGRPITQEPLLVDTA 117
              +   R + L +++ L +    P DT  I   T   S  + + + IG P  +   +VDT 
Sbjct:    69 NRGFHRLNRLGAVAVL-AVASKPDDTNNIKAPTHGGSGEFLMELSIGNPAVKYSAIVDTG 127

Query:   118 SDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVND--VCVYDER 175
             SDLIWTQC+PC  CF Q  PI+DP +S++Y ++ C+  LC      +C  D   C Y   
Sbjct:   128 SDLIWTQCKPCTECFDQPTPIFDPEKSSSYSKVGCSSGLCNALPRSNCNEDKDACEYLYT 187

Query:   176 YANGASTKGIASEDLFFFFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLI 235
             Y + +ST+G+ + + F F  ++    + FGC  +N+G  F      SG++GL   PLSLI
Sbjct:   188 YGDYSSTRGLLATETFTFEDENSISGIGFGCGVENEGDGFSQG---SGLVGLGRGPLSLI 244

Query:   236 SQIGGDINHKFSYCLVY---PLASSTLTFGD-----VDTSGLPIQSTPFVT------PHA 281
             SQ+      KFSYCL       ASS+L  G      V+ +G  +      T      P  
Sbjct:   245 SQLK---ETKFSYCLTSIEDSEASSSLFIGSLASGIVNKTGASLDGEVTKTMSLLRNPDQ 301

Query:   282 PGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLE 341
             P +  YYL L  +++G  R+    +TF +   E G GG I+DSG+  T +E T ++ + E
Sbjct:   302 PSF--YYLELQGITVGAKRLSVEKSTFEL--AEDGTGGMIIDSGTTITYLEETAFKVLKE 357

Query:   342 QFMAYFERFHL-IRVQTATGFELCYRQDPNFTDY--PSMTLHFQGADWPLPKEYVYIFNT 398
             +F +   R  L +    +TG +LC++      +   P M  HF+GAD  LP E  Y+   
Sbjct:   358 EFTS---RMSLPVDDSGSTGLDLCFKLPDAAKNIAVPKMIFHFKGADLELPGEN-YMVAD 413

Query:   399 AGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVC 443
             +     C+A+   + ++I G   QQN  V++D+    + F P  C
Sbjct:   414 SSTGVLCLAMGSSNGMSIFGNVQQQNFNVLHDLEKETVSFVPTEC 458
GO:0004190 "aspartic-type endopeptidase activity" evidence=IEA
GO:0005576 "extracellular region" evidence=ISM
GO:0006508 "proteolysis" evidence=IEA;ISS
GO:0000041 "transition metal ion transport" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0016926 "protein desumoylation" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010786 AT1G64830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031225 AT1G25510 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095365 AT3G20015 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183715 AT5G10760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2206184 AT1G31450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2126505 AT4G30040 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.766
3rd Layer3.4.23.120.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
Sb06g018170.1
hypothetical protein (452 aa)
(Sorghum bicolor)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 2e-58
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 3e-57
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 1e-52
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 9e-39
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 8e-18
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 4e-16
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 1e-12
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 2e-12
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 6e-09
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 0.003
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  192 bits (489), Expect = 2e-58
 Identities = 118/357 (33%), Positives = 149/357 (41%), Gaps = 103/357 (28%)

Query: 97  YFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPL 156
           Y V + IG P     L+VDT SDL WTQC                               
Sbjct: 2   YLVTLSIGTPPQPFSLIVDTGSDLTWTQC------------------------------- 30

Query: 157 CENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEF--LVFGCSDDNQGFP 214
                        C Y+  Y +G+ST G+ + +  F F DS      + FGC  DN+G  
Sbjct: 31  -------------CSYEYSYGDGSSTSGVLATE-TFTFGDSSVSVPNVAFGCGTDNEGGS 76

Query: 215 FGPDNRISGILGLSMSPLSLISQIGGDINHKFSYCLVYPL---ASSTLTFGDVDTSGLP- 270
           FG      GILGL   PLSL+SQ+G   N KFSYCLV       SS L  GD    G   
Sbjct: 77  FGGA---DGILGLGRGPLSLVSQLGSTGN-KFSYCLVPHDDTGGSSPLILGDAADLGGSG 132

Query: 271 IQSTPFVT-PHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFT 329
           +  TP V  P  P Y  YY+NL  +S+G  R+  PP+ FAI       GG I+DSG+  T
Sbjct: 133 VVYTPLVKNPANPTY--YYVNLEGISVGGKRLPIPPSVFAIDSDGS--GGTIIDSGTTLT 188

Query: 330 SMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQ-GADWPL 388
            +                                          YP +TLHF  GAD  L
Sbjct: 189 YLPDPA--------------------------------------YPDLTLHFDGGADLEL 210

Query: 389 PKEYVYIFNTAGEKYFCVALLPD--DRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVC 443
           P E  ++    G    C+A+L      ++I+G   QQN LV YD+ N+RL FAP  C
Sbjct: 211 PPENYFVDVGEGV--VCLAILSSSSGGVSILGNIQQQNFLVEYDLENSRLGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 447
PLN03146431 aspartyl protease family protein; Provisional 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.94
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.9
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 97.98
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 96.42
PF1365090 Asp_protease_2: Aspartyl protease 95.86
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.35
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 94.03
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 93.73
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 92.41
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 89.9
cd0609586 RP_RTVL_H_like Retropepsin of the RTVL_H family of 87.07
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 85.4
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 85.07
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 85.04
COG3577215 Predicted aspartyl protease [General function pred 83.68
PF1365090 Asp_protease_2: Aspartyl protease 80.86
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.5e-71  Score=562.09  Aligned_cols=411  Identities=31%  Similarity=0.555  Sum_probs=339.0

Q ss_pred             HHHHHHHhhhhhccccCCCCeeEEEEeeCCCCCC----CCCChhHHHHHHHHHhHHHHHhhhhhcccCCCCCCCCCCccc
Q 046673           13 FFCCLALLSQSHFTASKSDGLIRLQLIPVDSLEP----QNLNESQKFHGLVEKSKRRASYLKSISTLNSSVLNPSDTIPI   88 (447)
Q Consensus        13 ~~~~l~~~~~~~~~~a~~~~~~~l~l~~~~~~~~----~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~   88 (447)
                      +.+||..+..+++..++..++ +++|+||++++.    ++.+..++++++++|+.+|++++.++...       ...+..
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~-~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-------~~~~~~   76 (431)
T PLN03146          5 LALCLFSFSELSAAEAPKGGF-TVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDAS-------PNDPQS   76 (431)
T ss_pred             HHHHHHHHhhhhhccccCCce-EEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhcccc-------CCcccc
Confidence            344455555566666788899 999999998762    35566799999999999999998654321       124445


Q ss_pred             ceeccCccEEEEEEecCCCceEeEEEECCCCceeEeCCCCCCCCCCCCCCCCCCCCCCcceecCCCccccCCCCC-CCC-
Q 046673           89 TMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREF-SCV-  166 (447)
Q Consensus        89 ~l~~~~~~Y~~~i~iGtP~Q~~~~~~DTGS~~~Wv~~~~C~~c~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~-~C~-  166 (447)
                      ++...+++|+++|.||||||++.|++||||+++||+|.+|..|..+.++.|||++|+||+.+.|.++.|..++.. .|. 
T Consensus        77 ~~~~~~~~Y~v~i~iGTPpq~~~vi~DTGS~l~Wv~C~~C~~C~~~~~~~fdps~SST~~~~~C~s~~C~~~~~~~~c~~  156 (431)
T PLN03146         77 DLISNGGEYLMNISIGTPPVPILAIADTGSDLIWTQCKPCDDCYKQVSPLFDPKKSSTYKDVSCDSSQCQALGNQASCSD  156 (431)
T ss_pred             CcccCCccEEEEEEcCCCCceEEEEECCCCCcceEcCCCCcccccCCCCcccCCCCCCCcccCCCCcccccCCCCCCCCC
Confidence            566688999999999999999999999999999999999999999999999999999999999999999887654 466 


Q ss_pred             CCceeeeEecCCCCeeeEEEEEEEEEecCC-----CcceeeEeeeeecCCCCCCCCCCCcceEEeeCCCCChhhhhhhcc
Q 046673          167 NDVCVYDERYANGASTKGIASEDLFFFFPD-----SIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIGGD  241 (447)
Q Consensus       167 ~~~~~~~~~Y~dg~~~~G~~~~D~v~i~~~-----~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s~~~ql~~~  241 (447)
                      ++.|.|.+.|+||+.+.|.+++|+|+|++.     +++ ++.|||++...+. |.  ...+||||||+++.|+++|+...
T Consensus       157 ~~~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~-~~~FGc~~~~~g~-f~--~~~~GilGLG~~~~Sl~sql~~~  232 (431)
T PLN03146        157 ENTCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFP-GIVFGCGHNNGGT-FD--EKGSGIVGLGGGPLSLISQLGSS  232 (431)
T ss_pred             CCCCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeC-CEEEeCCCCCCCC-cc--CCCceeEecCCCCccHHHHhhHh
Confidence            456999999999997899999999999973     578 9999999988765 52  36899999999999999998865


Q ss_pred             cCCceEEEeec--C--CCCeeEEecCCCCC-CCCceeeecccCCCCCCceeEEEEeEEEEcceEeecCCCcccccccccC
Q 046673          242 INHKFSYCLVY--P--LASSTLTFGDVDTS-GLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERG  316 (447)
Q Consensus       242 ~~~~Fs~~l~~--~--~~~G~l~fGg~d~~-~g~l~~~p~~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~  316 (447)
                      ..++|||||.+  .  ...|.|+||+.... .+.+.|+|++.... + .+|+|+|++|+||++.+.++...|.  .  .+
T Consensus       233 ~~~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~-~-~~y~V~L~gIsVgg~~l~~~~~~~~--~--~~  306 (431)
T PLN03146        233 IGGKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDP-D-TFYYLTLEAISVGSKKLPYTGSSKN--G--VE  306 (431)
T ss_pred             hCCcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCC-C-CeEEEeEEEEEECCEECcCCccccc--c--CC
Confidence            55699999975  1  34799999996433 34589999986522 3 6999999999999999888776654  1  34


Q ss_pred             CCcEEEcccCcceecChhHHHHHHHHHHHHhhhcccccccCCCCcccccccCCCCCCCCeEEEEEeCceEEeCCCceEEE
Q 046673          317 LGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIF  396 (447)
Q Consensus       317 ~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~l~f~f~g~~~~l~~~~y~~~  396 (447)
                      .+++||||||++++||+++|++|.+++.+.+..  .+.......+.+|+.... ...+|+|+|+|+|.++.|++++|++.
T Consensus       307 ~g~~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~--~~~~~~~~~~~~C~~~~~-~~~~P~i~~~F~Ga~~~l~~~~~~~~  383 (431)
T PLN03146        307 EGNIIIDSGTTLTLLPSDFYSELESAVEEAIGG--ERVSDPQGLLSLCYSSTS-DIKLPIITAHFTGADVKLQPLNTFVK  383 (431)
T ss_pred             CCcEEEeCCccceecCHHHHHHHHHHHHHHhcc--ccCCCCCCCCCccccCCC-CCCCCeEEEEECCCeeecCcceeEEE
Confidence            568999999999999999999999999988762  111222234679997431 23689999999988999999999998


Q ss_pred             ecCCCceEEEEEEcCCCceeechhhhccEEEEEECCCCEEEEEeCCCCCC
Q 046673          397 NTAGEKYFCVALLPDDRLTIIGAYHQQNVLVIYDVGNNRLQFAPVVCKGP  446 (447)
Q Consensus       397 ~~~~~~~~C~~i~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~c~~~  446 (447)
                      ..  ++..|+++....+.+|||+.|||++|++||++++|||||+++|++.
T Consensus       384 ~~--~~~~Cl~~~~~~~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~~  431 (431)
T PLN03146        384 VS--EDLVCFAMIPTSSIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTKM  431 (431)
T ss_pred             cC--CCcEEEEEecCCCceEECeeeEeeEEEEEECCCCEEeeecCCcCcC
Confidence            76  5678999877556799999999999999999999999999999863

>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>cd06095 RP_RTVL_H_like Retropepsin of the RTVL_H family of human endogenous retrovirus-like elements Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 2e-11
3vla_A413 Crystal Structure Of Edgp Length = 413 2e-11
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 8e-11
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 9e-04
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure 
Iteration: 1

 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 91/401 (22%), Positives = 162/401 (40%), Gaps = 62/401 (15%)
Query: 86  IPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPR--Q 143
           +P+  +  +  Y   I    P+  E L+VD     +W  C    N    T+     R  Q
Sbjct: 11  VPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQ--NYVSSTYRPVRCRTSQ 68
Query: 144 SATYGRLPCNDPLCENNREFSCVNDVC-VYDERYANGASTKGIASEDLFFFFPD------ 196
            +  G + C D  C N     C N+ C V+ E      +T G  +ED+            
Sbjct: 69  CSLSGSIACGD--CFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSG 126
Query: 197 ---SIPEFLVFGCSDDN--QGFPFGPDNRISGILGLSMSPLSLISQIGG--DINHKFSYC 249
              ++P F +F C+  +  Q    G    + G+ GL  + ++L SQ         KF+ C
Sbjct: 127 RVVTVPRF-IFSCAPTSLLQNLASG----VVGMAGLGRTRIALPSQFASAFSFKRKFAMC 181
Query: 250 LVYPLAS-STLTFGDVDTSGLP--------IQSTPFVT-PHAPGYSN--------YYLNL 291
           L    +S S + FG+   + LP        +  TP +T P +   ++        Y++ +
Sbjct: 182 LSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGV 241
Query: 292 IDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFH 351
             + I +  +    NT  +     GLGG  + + + +T +E + Y+ V E F+      +
Sbjct: 242 KSIKINSKIVAL--NTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARN 299
Query: 352 LIRVQTATGFELCYRQDPNFT-----DYPSMTLHFQGAD--WPL--PKEYVYIFNTAGEK 402
           + RV +   F  C+  D   +       PS+ L  Q     W +      VYI     + 
Sbjct: 300 ITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYI----NDN 355
Query: 403 YFCVALL---PDDRLTI-IGAYHQQNVLVIYDVGNNRLQFA 439
             C+ ++    + R +I IG +  ++ LV +D+  +R+ F+
Sbjct: 356 VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLATSRVGFS 396
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query447
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 3e-71
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 9e-67
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 3e-66
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 5e-17
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 3e-16
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 7e-16
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 1e-15
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 1e-15
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 2e-15
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 3e-15
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 9e-15
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 1e-14
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 1e-14
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 4e-14
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 7e-14
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 2e-13
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 2e-13
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 2e-13
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 4e-13
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 4e-13
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 5e-13
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 5e-13
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-12
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 3e-12
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 6e-12
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 1e-11
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 1e-11
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 6e-11
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 1e-10
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-08
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 4e-08
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 3e-07
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 7e-06
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  230 bits (586), Expect = 3e-71
 Identities = 68/385 (17%), Positives = 136/385 (35%), Gaps = 34/385 (8%)

Query: 85  TIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQS 144
            +P+  +  + L++ N+    P+ Q P+LVD   + +W  C+   +      P     Q 
Sbjct: 11  VLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQC 70

Query: 145 ATYGRLPCNDPLCENNREFSCVNDVC-VYDERYANGASTKGIASEDLFFF---------- 193
           +      C      +     C  + C +         +  G   ED+             
Sbjct: 71  SRANTHQCLSCPAASRP--GCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQL 128

Query: 194 -FPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIG--GDINHKFSYCL 250
               ++P+F +F C+        G      G+ GL  +P+SL +Q+     +  +F+ CL
Sbjct: 129 GPLVTVPQF-LFSCAPSFLVQK-GLPRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCL 186

Query: 251 V-YPLASSTLTFGDVDTSGLPIQSTP------FVTPHAPGYSNYYLNLIDVSIGTHRMMF 303
             YP +   + FGD   +    Q+        F          Y + +  + I  H +  
Sbjct: 187 SRYPTSKGAIIFGDAPNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNSIRINQHSVFP 246

Query: 304 PPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVLEQFMAYFERFHLIRVQTATGFEL 363
                +        GG ++ + +    ++++ Y+   + F     +    +V++   F L
Sbjct: 247 LNKISSTIV-GSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQA--QVKSVAPFGL 303

Query: 364 CYRQDPNFTDYPSMTLHFQ---GADWPLPKEYVYIFNTAGEKYFCVALLPDD--RLTIIG 418
           C+        YPS+ L      G  W +  E + +    G     V            +G
Sbjct: 304 CFNS-NKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLG 362

Query: 419 AYHQQNVLVIYDVGNNRLQFAPVVC 443
           A   +  LV++D+  +R+ F+    
Sbjct: 363 ARQLEENLVVFDLARSRVGFSTSSL 387
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query447
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.88
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.7
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.54
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 92.76
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 81.49
2hs1_A99 HIV-1 protease; ultra-high resolution active site 81.24
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
Probab=100.00  E-value=2.4e-62  Score=488.63  Aligned_cols=349  Identities=20%  Similarity=0.296  Sum_probs=278.9

Q ss_pred             eEEEEeeCCCCCCCCCChhHHHHHHHHHhHHHHHhhhhhcccCCCCCCCCCCcccceec-cCccEEEEEEecCCCceEeE
Q 046673           34 IRLQLIPVDSLEPQNLNESQKFHGLVEKSKRRASYLKSISTLNSSVLNPSDTIPITMNT-QSSLYFVNIGIGRPITQEPL  112 (447)
Q Consensus        34 ~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~Y~~~i~iGtP~Q~~~~  112 (447)
                      +++||++..+.+ ..+.....+.+.+++++.|......+.       ........||.+ .+.+|+++|+||||||++.|
T Consensus         2 ~~ipl~~~~s~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v   73 (370)
T 3psg_A            2 VKVPLVRKKSLR-QNLIKDGKLKDFLKTHKHNPASKYFPE-------AAALIGDEPLENYLDTEYFGTIGIGTPAQDFTV   73 (370)
T ss_dssp             EEEEEEECCCHH-HHHHHTTCHHHHHHHCCCCGGGGTCTT-------SCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEE
T ss_pred             EEEEeEEcCcHH-HHHHhcCcHHHHHhhhhcchhhhhccc-------cccccceecceeccCCEEEEEEEEcCCCCEEEE
Confidence            489999998877 111111223333333322211110000       001245566664 78999999999999999999


Q ss_pred             EEECCCCceeEeCCCCCCCCCCCCCCCCCCCCCCcceecCCCccccCCCCCCCCCCceeeeEecCCCCeeeEEEEEEEEE
Q 046673          113 LVDTASDLIWTQCQPCINCFPQTFPIYDPRQSATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFF  192 (447)
Q Consensus       113 ~~DTGS~~~Wv~~~~C~~c~~~~~~~y~p~~Sst~~~~~c~~~~C~~~~~~~C~~~~~~~~~~Y~dg~~~~G~~~~D~v~  192 (447)
                      ++||||+++||+|..|..|.|..++.|||++|+||+...                  |.|.+.|++|+ +.|.+++|+|+
T Consensus        74 ~~DTGSs~lWV~s~~C~~~~C~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~Gs-~~G~~~~Dtv~  134 (370)
T 3psg_A           74 IFDTGSSNLWVPSVYCSSLACSDHNQFNPDDSSTFEATS------------------QELSITYGTGS-MTGILGYDTVQ  134 (370)
T ss_dssp             EEETTCCCEEEEBTTCCSGGGTTSCCBCGGGCTTCEEEE------------------EEEEEESSSCE-EEEEEEEEEEE
T ss_pred             EEeCCCCccEEECCCCCCcccCCCCCCCCccCcCcEECC------------------cEEEEEeCCce-EEEEEEEEEEe
Confidence            999999999999999999999999999999999999987                  89999999999 99999999999


Q ss_pred             ecCCCcceeeEeeeeecCCCCCCCCCCCcceEEeeCCCCCh------hhhhhhc---ccCCceEEEeec-CCCCeeEEec
Q 046673          193 FFPDSIPEFLVFGCSDDNQGFPFGPDNRISGILGLSMSPLS------LISQIGG---DINHKFSYCLVY-PLASSTLTFG  262 (447)
Q Consensus       193 i~~~~~~~~~~fg~~~~~~~~~~~~~~~~~GIlGLg~~~~s------~~~ql~~---~~~~~Fs~~l~~-~~~~G~l~fG  262 (447)
                      |++..++ ++.|||+....+..| ....++||||||++..+      ++++|..   +..++||+||.+ ....|.|+||
T Consensus       135 ig~~~v~-~~~Fg~a~~~~~~~~-~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fG  212 (370)
T 3psg_A          135 VGGISDT-NQIFGLSETEPGSFL-YYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLG  212 (370)
T ss_dssp             ETTEEEE-EEEEEEECSCCCGGG-GGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEET
T ss_pred             eCCcccC-CeEEEEEEeeccccc-ccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEE
Confidence            9999999 999999998876423 33678999999998765      4444433   568999999998 3468999999


Q ss_pred             CCCCC--CCCceeeecccCCCCCCceeEEEEeEEEEcceEeecCCCcccccccccCCCcEEEcccCcceecChhHHHHHH
Q 046673          263 DVDTS--GLPIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVERGLGGCIMDSGSAFTSMERTPYRQVL  340 (447)
Q Consensus       263 g~d~~--~g~l~~~p~~~~~~~~~~~y~v~l~~i~v~~~~~~~~~~~~~~~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~  340 (447)
                      |+|++  .|+++|+|+...     .+|.|+|++|+|+++.+..           .+...+||||||+++++|++++++|.
T Consensus       213 g~D~~~y~g~l~~~pv~~~-----~~w~v~l~~i~v~g~~~~~-----------~~~~~aiiDTGTs~~~lP~~~~~~i~  276 (370)
T 3psg_A          213 GIDSSYYTGSLNWVPVSVE-----GYWQITLDSITMDGETIAC-----------SGGCQAIVDTGTSLLTGPTSAIANIQ  276 (370)
T ss_dssp             CCCGGGBSSCCEEEECSEE-----TTEEEEECEEESSSSEEEC-----------TTCEEEEECTTCCSEEEEHHHHHHHH
T ss_pred             eeChHhcCCcceeeccccc-----ceeEEEEeEEEECCEEEec-----------CCCceEEEcCCCCcEECCHHHHHHHH
Confidence            99987  899999999876     7999999999999987753           23468999999999999999999999


Q ss_pred             HHHHHHhhhcccccccCCCCcccccccCCCCCCCCeEEEEEeCceEEeCCCceEEEecCCCceEEEE-EEcC-----CC-
Q 046673          341 EQFMAYFERFHLIRVQTATGFELCYRQDPNFTDYPSMTLHFQGADWPLPKEYVYIFNTAGEKYFCVA-LLPD-----DR-  413 (447)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~P~l~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~-i~~~-----~~-  413 (447)
                      +++++...       ....+.++|+...    .+|+|+|+|+|.++.||+++|+++ .  + ..|++ |+..     .+ 
T Consensus       277 ~~i~a~~~-------~~g~~~v~C~~~~----~lP~i~f~~~g~~~~l~~~~yi~~-~--~-~~C~~~~~~~~~~~~~~~  341 (370)
T 3psg_A          277 SDIGASEN-------SDGEMVISCSSID----SLPDIVFTIDGVQYPLSPSAYILQ-D--D-DSCTSGFEGMDVPTSSGE  341 (370)
T ss_dssp             HHTTCEEC-------TTCCEECCGGGGG----GCCCEEEEETTEEEEECHHHHEEE-C--S-SCEEESEEEECCCTTSCC
T ss_pred             HHhCCccc-------CCCcEEEECCCcc----cCCcEEEEECCEEEEECHHHhccc-C--C-CEEEEEEEeCCCCCCCCC
Confidence            99866422       1124457999887    899999999999999999999998 3  3 35998 7651     23 


Q ss_pred             ceeechhhhccEEEEEECCCCEEEEEeCC
Q 046673          414 LTIIGAYHQQNVLVIYDVGNNRLQFAPVV  442 (447)
Q Consensus       414 ~~iLG~~fl~~~yvvfD~~~~~igfa~~~  442 (447)
                      .||||++|||++|+|||++++|||||+++
T Consensus       342 ~~ILG~~Fl~~~y~vfD~~~~riGfA~a~  370 (370)
T 3psg_A          342 LWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             EEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             cEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence            59999999999999999999999999985
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 447
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 4e-41
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 7e-32
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 8e-32
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 2e-31
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 7e-31
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 2e-30
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 3e-29
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 4e-29
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 7e-29
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 8e-29
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 2e-28
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 4e-28
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 6e-28
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 9e-28
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 4e-27
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 6e-26
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 7e-26
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 1e-25
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 1e-25
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 3e-24
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 3e-23
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 6e-17
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  148 bits (374), Expect = 4e-41
 Identities = 64/384 (16%), Positives = 120/384 (31%), Gaps = 46/384 (11%)

Query: 85  TIPITMNTQSSLYFVNIGIGRPITQEPLLVDTASDLIWTQCQPCINCFPQTFPIYDPRQS 144
             P+T +  +SLY +    G       L++D A  L+W+ C                  +
Sbjct: 4   LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCLLA 58

Query: 145 ATYGRLPCNDPLCENNREFSCVNDVCVYDERYANGASTKGIASEDLFFFFPDSIPEFLV- 203
             Y    C  P C ++           Y     +GA   G  S   F        + +  
Sbjct: 59  NAYPAPGCPAPSCGSD---KHDKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSK 115

Query: 204 ----FGCSDDNQGFPFGPDNRISGILGLSMSPLSLISQIG--GDINHKFSYCLVYPLA-S 256
                  +              +G+ GL+ S L+L +Q+     + ++F  CL       
Sbjct: 116 VNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGV 175

Query: 257 STLTFGDVDTSGL--PIQSTPFVTPHAPGYSNYYLNLIDVSIGTHRMMFPPNTFAIRDVE 314
           +    G V        +  TP VT        +Y++   + +G  R+  P    A     
Sbjct: 176 AIFGGGPVPWPQFTQSMPYTPLVTKGGSPA--HYISARSIVVGDTRVPVPEGALAT---- 229

Query: 315 RGLGGCIMDSGSAFTSMERTPYRQVLEQFMA------YFERFHLIRVQTATGFELCYRQD 368
              GG ++ +   +  +    YR +++ F                 V+    F +CY   
Sbjct: 230 ---GGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTK 286

Query: 369 PNFT-----DYPSMTLHFQ-GADWPLPKEYVYIFNTAGEKYFCVA-------LLPDDRLT 415
                      P++ L    G+DW +  +   +    G                      
Sbjct: 287 TLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAGDGRAPAV 346

Query: 416 IIGAYHQQNVLVIYDVGNNRLQFA 439
           I+G    ++ ++ +D+   RL F+
Sbjct: 347 ILGGAQMEDFVLDFDMEKKRLGFS 370
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query447
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure