Citrus Sinensis ID: 046757

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-----
MVMVVAVRMELIHRHSPKLNNMPMMSEVERMKELLHNDIIRQNKRRGRRLRQTNNNNNNGASGSAIEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFAPSTCAT
ccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEccccccccccccEEEEEEEcccccEEEEEEEcccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccEEEEEEEEEEEEEEcccccccccccEEEEccccccccccccccEEEccccccccHHHHHHccccccccEEEEEccccccccccccEEEcccccccccccEEEEEcccccccEEEEEEEEEEccEEEEcccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEEEEccccEEEEccccEEEEEcccEEEEEEEEcccccEEEEEEEEEEEEEEEEEccccEEEEEcccccc
cEEEEEEEEEEEEcccccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEcccccEEEcccccccccccccccHHHHHccccccccccccEEccccccHHHEEcccccccccccccccccEEEEEEcccccccEEEEEEEEEEccEcccccccccEEEEEEEccccccccccccEEccccccHHHHHHHHHcccccccEEEEEEEcccccccccEEEEEcccccccccccEEEEccccccEEEEEEEEEEEccEEEEccccEEEEccccEEEEEcccEEEcccHHHHHHHHHHHHHHHccccccccccccccEEEEEcccccccccEEEEEEccEEccccHHHEEEEEcccEEEEEccccccccEEEEcHHEEccEEEEEEcccccEEEEcccccc
MVMVVAVRMELIhrhspklnnmpmMSEVERMKELLHNDIIRQNKRRGRRLRqtnnnnnngasgsaiemplqagrdygtgmYFVEikvgtpsqkLRLIVdtgsefswiscryhcgpsctkkgtiagsrrRVFKadlsssfktipcssdmckSEFARLFsltfcptptspcaydyryadgsaakgifgkervtiglenggktrIEEVVMGCSDTIQGQIFAEAdgvlglsydkYSFAQkvtngstfargKFAYCLVDHlshknvsnyliFGEESKRMRMRMRYTLLGLigpdygvsvkgisiggvmlnipsqvwdfnrgggtafdsgttltflaepaykPVVAALEMSLSRYQRlkrdapfeycfnstgfdessvpklvfhfadgarfephtkSYIIRVAHGIRClgfvsatwpgasaignimqqnYFWEFDLLKdrlgfapstcat
MVMVVAVRMelihrhspklnnmpMMSEVERMKELLHNDIIrqnkrrgrrlrqtnnnnnngasgsaieMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWiscryhcgpsctkkgtiagsrrrVFKADLsssfktipcssdMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDhlshknvsnyliFGEESKRMRMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFAPSTCAT
MVMVVAVRMELIHRHSPKLNNMPMMSEVERMKELLHNDIIrqnkrrgrrlrqtnnnnnnGASGSAIEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLLGLIGPDYgvsvkgisiggvMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFAPSTCAT
****VAVR****************************************************************GRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFA******
***VVAVRMELIHRHS*******************************************************AGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTK***********************PCSSDMCKSEFA**********PTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVD****************SKRMRMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEM**********DAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFAPSTCA*
MVMVVAVRMELIHRHSPKLNNMPMMSEVERMKELLHNDIIRQNKRRGRRLRQTNNNNNNGASGSAIEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFAPSTCAT
MVMVVAVRMELIHRHSPKLNNMPMMSEVERMKELLHNDIIRQNKRRGRRLRQTNNN******GSAIEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFAPS****
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MVMVVAVRMELIHRHSPKLNNMPMMSEVERMKELLHNDIIRQNKRRGRRLRQTNNNNNNGASGSAIEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFAPSTCAT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query445 2.2.26 [Sep-21-2011]
Q766C3437 Aspartic proteinase nepen N/A no 0.901 0.917 0.292 9e-38
Q766C2438 Aspartic proteinase nepen N/A no 0.862 0.876 0.274 2e-34
Q9LS40500 Protein ASPARTIC PROTEASE no no 0.777 0.692 0.297 3e-30
Q6XBF8437 Aspartic proteinase CDR1 no no 0.896 0.913 0.257 6e-28
Q9S9K4475 Aspartic proteinase-like no no 0.802 0.751 0.281 3e-25
Q9LHE3470 Protein ASPARTIC PROTEASE no no 0.779 0.738 0.288 4e-24
Q3EBM5447 Probable aspartic proteas no no 0.901 0.897 0.254 2e-23
Q9LZL3453 Aspartic proteinase PCS1 no no 0.739 0.726 0.261 1e-22
Q9LX20528 Aspartic proteinase-like no no 0.901 0.759 0.229 6e-21
A2ZC67410 Aspartic proteinase Asp1 N/A no 0.770 0.836 0.235 4e-12
>sp|Q766C3|NEP1_NEPGR Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1 Back     alignment and function desciption
 Score =  158 bits (399), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 192/445 (43%), Gaps = 44/445 (9%)

Query: 8   RMELIHRHSPKLNNMPMMSE-VERMKELLHNDIIRQNKRRGRRLRQTNNNNNNGASGSAI 66
           R  L HRH  K+    +M E V+  K L    ++ +   RG R  Q      NG SG  +
Sbjct: 27  RTALNHRHEAKVTGFQIMLEHVDSGKNLTKFQLLERAIERGSRRLQRLEAMLNGPSG--V 84

Query: 67  EMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGS 126
           E  + AG     G Y + + +GTP+Q    I+DTGS+  W  C+      CT+       
Sbjct: 85  ETSVYAGD----GEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQ-----PCTQ---CFNQ 132

Query: 127 RRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFG 186
              +F    SSSF T+PCSS +C++  +   S  F       C Y Y Y DGS  +G  G
Sbjct: 133 STPIFNPQGSSSFSTLPCSSQLCQALSSPTCSNNF-------CQYTYGYGDGSETQGSMG 185

Query: 187 KERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFAR 246
            E +T      G   I  +  GC +  QG       G++G+     S   ++        
Sbjct: 186 TETLTF-----GSVSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLD------V 234

Query: 247 GKFAYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLL--GLIGPDYGVSVKGISIGGVM 304
            KF+YC+   +     SN L+    +         TL+    I   Y +++ G+S+G   
Sbjct: 235 TKFSYCMTP-IGSSTPSNLLLGSLANSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGSTR 293

Query: 305 LNIPSQVWDFNRGGGTA---FDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEY 361
           L I    +  N   GT     DSGTTLT+    AY+ V       ++        + F+ 
Sbjct: 294 LPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGFDL 353

Query: 362 CFNSTGFDESS--VPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGN 419
           CF  T  D S+  +P  V HF DG   E  +++Y I  ++G+ CL   S++  G S  GN
Sbjct: 354 CFQ-TPSDPSNLQIPTFVMHF-DGGDLELPSENYFISPSNGLICLAMGSSSQ-GMSIFGN 410

Query: 420 IMQQNYFWEFDLLKDRLGFAPSTCA 444
           I QQN    +D     + FA + C 
Sbjct: 411 IQQQNMLVVYDTGNSVVSFASAQCG 435
Extracellular proteinase found in the pitcher fluid of carnivorous plants. Digest prey for nitrogen uptake.
Nepenthes gracilis (taxid: 150966)
EC: 3EC: .EC: 4EC: .EC: 2EC: 3EC: .EC: 1EC: 2
>sp|Q766C2|NEP2_NEPGR Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1 Back     alignment and function description
>sp|Q9LS40|ASPG1_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 1 OS=Arabidopsis thaliana GN=ASPG1 PE=1 SV=1 Back     alignment and function description
>sp|Q6XBF8|CDR1_ARATH Aspartic proteinase CDR1 OS=Arabidopsis thaliana GN=CDR1 PE=1 SV=1 Back     alignment and function description
>sp|Q9S9K4|ASPL2_ARATH Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2 Back     alignment and function description
>sp|Q9LHE3|ASPG2_ARATH Protein ASPARTIC PROTEASE IN GUARD CELL 2 OS=Arabidopsis thaliana GN=ASPG2 PE=2 SV=1 Back     alignment and function description
>sp|Q3EBM5|ASPR1_ARATH Probable aspartic protease At2g35615 OS=Arabidopsis thaliana GN=At2g35615 PE=3 SV=1 Back     alignment and function description
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1 Back     alignment and function description
>sp|Q9LX20|ASPL1_ARATH Aspartic proteinase-like protein 1 OS=Arabidopsis thaliana GN=At5g10080 PE=1 SV=1 Back     alignment and function description
>sp|A2ZC67|ASP1_ORYSI Aspartic proteinase Asp1 OS=Oryza sativa subsp. indica GN=ASP1 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query445
147814824449 hypothetical protein VITISV_015630 [Viti 0.973 0.964 0.550 1e-141
359494621449 PREDICTED: aspartic proteinase nepenthes 0.973 0.964 0.548 1e-140
297736090378 unnamed protein product [Vitis vinifera] 0.833 0.981 0.581 1e-127
30682289461 aspartyl protease family protein [Arabid 0.914 0.882 0.488 1e-114
17979392439 unknown protein [Arabidopsis thaliana] 0.914 0.927 0.488 1e-114
297829808449 hypothetical protein ARALYDRAFT_478632 [ 0.928 0.919 0.486 1e-113
356555248453 PREDICTED: aspartic proteinase nepenthes 0.928 0.911 0.444 1e-100
255554715489 Aspartic proteinase Asp1 precursor, puta 0.952 0.867 0.440 2e-98
356528623507 PREDICTED: aspartic proteinase nepenthes 0.984 0.863 0.418 2e-97
326523839473 predicted protein [Hordeum vulgare subsp 0.838 0.788 0.451 3e-88
>gi|147814824|emb|CAN65806.1| hypothetical protein VITISV_015630 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/452 (55%), Positives = 321/452 (71%), Gaps = 19/452 (4%)

Query: 7   VRMELIHRHSPKLNNMPMMSEVERMKELLHNDIIRQ----NKRRG-----RRLRQTNNNN 57
           +R+ELIHRHSP++   P  ++++R+KEL+H+D +RQ    +K RG     R+ ++  +++
Sbjct: 1   MRLELIHRHSPQVMGRPK-TQLQRLKELVHSDSVRQLMILHKLRGGQIPRRKAKEVLSSS 59

Query: 58  NNGASGSAIEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHC-GPS 116
           +   S  AIE+P+    DYG G YFV  KVGTPSQK  L+ DTGS+ +W+SC+YHC   +
Sbjct: 60  SGRGSDDAIEVPMHPAADYGIGQYFVAFKVGTPSQKFMLVADTGSDLTWMSCKYHCRSRN 119

Query: 117 CTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYA 176
           C+ +       +RVF A+LSSSFKTIPC +DMCK E   LFSLT CPTP +PC YDYRY+
Sbjct: 120 CSNRKARRIRHKRVFHANLSSSFKTIPCLTDMCKIELMDLFSLTNCPTPLTPCGYDYRYS 179

Query: 177 DGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQ 236
           DGS A G F  E VT+ L+ G K ++  V++GCS++ QGQ F  ADGV+GL Y KYSFA 
Sbjct: 180 DGSTALGFFANETVTVELKEGRKMKLHNVLIGCSESFQGQSFQAADGVMGLGYSKYSFAI 239

Query: 237 KVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESKRMRM--RMRYT--LLGLIGPDYG 292
           K      F  GKF+YCLVDHLSHKNVSNYL FG    +  +   M YT  +LG++   Y 
Sbjct: 240 KA--AEKFG-GKFSYCLVDHLSHKNVSNYLTFGSSRSKEALLNNMTYTELVLGMVNSFYA 296

Query: 293 VSVKGISIGGVMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQR 352
           V++ GISIGG ML IPS+VWD    GGT  DSG++LTFL EPAY+PV+AAL +SL ++++
Sbjct: 297 VNMMGISIGGAMLKIPSEVWDVKGAGGTILDSGSSLTFLTEPAYQPVMAALRVSLLKFRK 356

Query: 353 LKRD-APFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATW 411
           ++ D  P EYCFNSTGF+ES VP+LVFHFADGA FEP  KSY+I  A G+RCLGFVS  W
Sbjct: 357 VEMDIGPLEYCFNSTGFEESLVPRLVFHFADGAEFEPPVKSYVISAADGVRCLGFVSVAW 416

Query: 412 PGASAIGNIMQQNYFWEFDLLKDRLGFAPSTC 443
           PG S +GNIMQQN+ WEFDL   +LGFAPS+C
Sbjct: 417 PGTSVVGNIMQQNHLWEFDLGLKKLGFAPSSC 448

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359494621|ref|XP_002265771.2| PREDICTED: aspartic proteinase nepenthesin-2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297736090|emb|CBI24128.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|30682289|ref|NP_187876.2| aspartyl protease family protein [Arabidopsis thaliana] gi|11994412|dbj|BAB02414.1| chloroplast nucleoid DNA binding protein-like [Arabidopsis thaliana] gi|332641715|gb|AEE75236.1| aspartyl protease family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|17979392|gb|AAL49921.1| unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297829808|ref|XP_002882786.1| hypothetical protein ARALYDRAFT_478632 [Arabidopsis lyrata subsp. lyrata] gi|297328626|gb|EFH59045.1| hypothetical protein ARALYDRAFT_478632 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|356555248|ref|XP_003545946.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|255554715|ref|XP_002518395.1| Aspartic proteinase Asp1 precursor, putative [Ricinus communis] gi|223542240|gb|EEF43782.1| Aspartic proteinase Asp1 precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356528623|ref|XP_003532899.1| PREDICTED: aspartic proteinase nepenthesin-1-like [Glycine max] Back     alignment and taxonomy information
>gi|326523839|dbj|BAJ96930.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query445
TAIR|locus:2087790461 NANA "NANA" [Arabidopsis thali 0.822 0.793 0.526 5.4e-102
TAIR|locus:2102335452 AT3G25700 [Arabidopsis thalian 0.822 0.809 0.341 8.5e-49
TAIR|locus:2077700535 AT3G59080 "AT3G59080" [Arabido 0.811 0.674 0.326 6.2e-46
TAIR|locus:2045615527 AT2G42980 [Arabidopsis thalian 0.813 0.686 0.307 4.5e-43
TAIR|locus:2145954437 CDR1 "CONSTITUTIVE DISEASE RES 0.779 0.794 0.252 2.2e-36
TAIR|locus:2200023492 AT1G08210 [Arabidopsis thalian 0.822 0.743 0.262 9.8e-32
TAIR|locus:2035297485 AT1G01300 [Arabidopsis thalian 0.662 0.608 0.325 8.8e-31
TAIR|locus:2183617482 AT5G36260 [Arabidopsis thalian 0.813 0.751 0.267 2.3e-30
TAIR|locus:2076745483 AT3G61820 [Arabidopsis thalian 0.665 0.612 0.319 8.3e-30
TAIR|locus:2172661493 AT5G22850 [Arabidopsis thalian 0.831 0.750 0.251 1e-27
TAIR|locus:2087790 NANA "NANA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1011 (360.9 bits), Expect = 5.4e-102, P = 5.4e-102
 Identities = 201/382 (52%), Positives = 250/382 (65%)

Query:    66 IEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAG 125
             ++M L +G DYGT  YF EI+VGTP++K R++VDTGSE +W++CRY        +G    
Sbjct:    91 VKMDLGSGIDYGTAQYFTEIRVGTPAKKFRVVVDTGSELTWVNCRYRA------RGK--- 141

Query:   126 SRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIF 185
               RRVF+AD S SFKT+ C +  CK +   LFSLT CPTP++PC+YDYRYADGSAA+G+F
Sbjct:   142 DNRRVFRADESKSFKTVGCLTQTCKVDLMNLFSLTTCPTPSTPCSYDYRYADGSAAQGVF 201

Query:   186 GKERVTIGLENGGKTRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFA 245
              KE +T+GL NG   R+   ++GCS +  GQ F  ADGVLGL++  +SF    T  S + 
Sbjct:   202 AKETITVGLTNGRMARLPGHLIGCSSSFTGQSFQGADGVLGLAFSDFSFTSTAT--SLYG 259

Query:   246 RGKFAYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLLGL--IGPDYXXXXXXXXXXXX 303
               KF+YCLVDHLS+KNVSNYLIFG          R T L L  I P Y            
Sbjct:   260 -AKFSYCLVDHLSNKNVSNYLIFGSSRSTKTAFRRTTPLDLTRIPPFYAINVIGISLGYD 318

Query:   304 MLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDA-PFEYC 362
             ML+IPSQVWD   GGGT  DSGT+LT LA+ AYK VV  L   L   +R+K +  P EYC
Sbjct:   319 MLDIPSQVWDATSGGGTILDSGTSLTLLADAAYKQVVTGLARYLVELKRVKPEGVPIEYC 378

Query:   363 FNST-GFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIM 421
             F+ T GF+ S +P+L FH   GARFEPH KSY++  A G++CLGFVSA  P  + IGNIM
Sbjct:   379 FSFTSGFNVSKLPQLTFHLKGGARFEPHRKSYLVDAAPGVKCLGFVSAGTPATNVIGNIM 438

Query:   422 QQNYFWEFDLLKDRLGFAPSTC 443
             QQNY WEFDL+   L FAPS C
Sbjct:   439 QQNYLWEFDLMASTLSFAPSAC 460
GO:0005576 "extracellular region" evidence=ISM
GO:0005634 "nucleus" evidence=ISM
GO:0006508 "proteolysis" evidence=ISS
GO:0004190 "aspartic-type endopeptidase activity" evidence=IDA
GO:0005975 "carbohydrate metabolic process" evidence=IMP
GO:0009507 "chloroplast" evidence=IDA
GO:0010019 "chloroplast-nucleus signaling pathway" evidence=IMP
TAIR|locus:2102335 AT3G25700 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2077700 AT3G59080 "AT3G59080" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2045615 AT2G42980 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145954 CDR1 "CONSTITUTIVE DISEASE RESISTANCE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2200023 AT1G08210 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2035297 AT1G01300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183617 AT5G36260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2076745 AT3G61820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172661 AT5G22850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.230.691
3rd Layer3.4.23.35LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query445
cd05476265 cd05476, pepsin_A_like_plant, Chroloplast Nucleoid 2e-79
cd05472299 cd05472, cnd41_like, Chloroplast Nucleoids DNA-bin 6e-53
cd05471283 cd05471, pepsin_like, Pepsin-like aspartic proteas 3e-42
PLN03146431 PLN03146, PLN03146, aspartyl protease family prote 2e-38
cd05489362 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibit 8e-19
pfam00026316 pfam00026, Asp, Eukaryotic aspartyl protease 9e-19
cd06096326 cd06096, Plasmepsin_5, Plasmepsins are a class of 6e-18
cd05475273 cd05475, nucellin_like, Nucellins, plant aspartic 2e-15
cd05470109 cd05470, pepsin_retropepsin_like, Cellular and ret 2e-12
cd06097278 cd06097, Aspergillopepsin_like, Aspergillopepsin_l 1e-10
cd05488320 cd05488, Proteinase_A_fungi, Fungal Proteinase A , 2e-08
cd05485329 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsi 2e-07
cd05486316 cd05486, Cathespin_E, Cathepsin E, non-lysosomal a 2e-06
cd05477318 cd05477, gastricsin, Gastricsins, asparate proteas 2e-06
cd05478317 cd05478, pepsin_A, Pepsin A, aspartic protease pro 4e-06
PTZ00165482 PTZ00165, PTZ00165, aspartyl protease; Provisional 5e-06
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 8e-06
cd05474295 cd05474, SAP_like, SAPs, pepsin-like proteinases s 2e-05
cd06098317 cd06098, phytepsin, Phytepsin, a plant homolog of 7e-05
cd05490325 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family 5e-04
>gnl|CDD|133143 cd05476, pepsin_A_like_plant, Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information 
 Score =  246 bits (630), Expect = 2e-79
 Identities = 113/370 (30%), Positives = 152/370 (41%), Gaps = 111/370 (30%)

Query: 80  MYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSF 139
            Y V + +GTP Q   LIVDTGS+ +W                                 
Sbjct: 1   EYLVTLSIGTPPQPFSLIVDTGSDLTW--------------------------------- 27

Query: 140 KTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGK 199
               C                        C+Y+Y Y DGS+  G+   E  T G  +   
Sbjct: 28  --TQC------------------------CSYEYSYGDGSSTSGVLATETFTFGDSS--- 58

Query: 200 TRIEEVVMGCSDTIQGQIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDHLSH 259
             +  V  GC    +G  F  ADG+LGL     S   ++  GST    KF+YCLV H   
Sbjct: 59  VSVPNVAFGCGTDNEGGSFGGADGILGLGRGPLSLVSQL--GSTG--NKFSYCLVPHDDT 114

Query: 260 KNVSNYLIFGEESKRMRMRMRYTLLGLIGPD----YGVSVKGISIGGVMLNIPSQVW--D 313
              S+ LI G+ +      + YT L +  P     Y V+++GIS+GG  L IP  V+  D
Sbjct: 115 -GGSSPLILGDAADLGGSGVVYTPL-VKNPANPTYYYVNLEGISVGGKRLPIPPSVFAID 172

Query: 314 FNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSV 373
            +  GGT  DSGTTLT+L +PAY                                     
Sbjct: 173 SDGSGGTIIDSGTTLTYLPDPAY------------------------------------- 195

Query: 374 PKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLK 433
           P L  HF  GA  E   ++Y + V  G+ CL  +S++  G S +GNI QQN+  E+DL  
Sbjct: 196 PDLTLHFDGGADLELPPENYFVDVGEGVVCLAILSSSSGGVSILGNIQQQNFLVEYDLEN 255

Query: 434 DRLGFAPSTC 443
            RLGFAP+ C
Sbjct: 256 SRLGFAPADC 265

This family contains pepsin like aspartic proteases from plants including Chloroplast Nucleoids DNA-binding Protease and Nucellin. Chloroplast Nucleoids DNA-binding Protease catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) in senescent leaves of tobacco and Nucellins are important regulators of nucellar cell's progressive degradation after ovule fertilization. Structurally, aspartic proteases are bilobal enzymes, each lobe contributing a catalytic Asp residue, with an extended active site cleft localized between the two lobes of the molecule. The N- and C-terminal domains, although structurally related by a 2-fold axis, have only limited sequence homology except the vicinity of the active site. This suggests that the enzymes evolved by an ancient duplication event. The enzymes specifically cleave bonds in peptides which have at least six residues in length with hydrophobic residues in both the P1 and P1' positions. The active site is located at the groove formed by the two lobes, with an extended loop projecting over the cleft to form an 11-residue flap, which encloses substrates and inhibitors in the active site. Specificity is determined by nearest-neighbor hydrophobic residues surrounding the catalytic aspartates, and by three residues in the flap. The enzymes are mostly secreted from cells as inactive proenzymes that activate autocatalytically at acidic pH. Length = 265
>gnl|CDD|133139 cd05472, cnd41_like, Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>gnl|CDD|133138 cd05471, pepsin_like, Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>gnl|CDD|178691 PLN03146, PLN03146, aspartyl protease family protein; Provisional Back     alignment and domain information
>gnl|CDD|133156 cd05489, xylanase_inhibitor_I_like, TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>gnl|CDD|215663 pfam00026, Asp, Eukaryotic aspartyl protease Back     alignment and domain information
>gnl|CDD|133160 cd06096, Plasmepsin_5, Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>gnl|CDD|133142 cd05475, nucellin_like, Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>gnl|CDD|133137 cd05470, pepsin_retropepsin_like, Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>gnl|CDD|133161 cd06097, Aspergillopepsin_like, Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>gnl|CDD|133155 cd05488, Proteinase_A_fungi, Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>gnl|CDD|133152 cd05485, Cathepsin_D_like, Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>gnl|CDD|133153 cd05486, Cathespin_E, Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>gnl|CDD|133144 cd05477, gastricsin, Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>gnl|CDD|133145 cd05478, pepsin_A, Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>gnl|CDD|240300 PTZ00165, PTZ00165, aspartyl protease; Provisional Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133141 cd05474, SAP_like, SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>gnl|CDD|133162 cd06098, phytepsin, Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>gnl|CDD|133157 cd05490, Cathepsin_D2, Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 445
PLN03146431 aspartyl protease family protein; Provisional 100.0
KOG1339398 consensus Aspartyl protease [Posttranslational mod 100.0
PTZ00165482 aspartyl protease; Provisional 100.0
cd05478317 pepsin_A Pepsin A, aspartic protease produced in g 100.0
cd05490325 Cathepsin_D2 Cathepsin_D2, pepsin family of protei 100.0
cd05486316 Cathespin_E Cathepsin E, non-lysosomal aspartic pr 100.0
cd05472299 cnd41_like Chloroplast Nucleoids DNA-binding Prote 100.0
cd05477318 gastricsin Gastricsins, asparate proteases produce 100.0
cd05488320 Proteinase_A_fungi Fungal Proteinase A , aspartic 100.0
cd06098317 phytepsin Phytepsin, a plant homolog of mammalian 100.0
cd05485329 Cathepsin_D_like Cathepsin_D_like, pepsin family o 100.0
cd05487326 renin_like Renin stimulates production of angioten 100.0
cd06096326 Plasmepsin_5 Plasmepsins are a class of aspartic p 100.0
cd05489362 xylanase_inhibitor_I_like TAXI-I inhibits degradat 100.0
PTZ00147453 plasmepsin-1; Provisional 100.0
PTZ00013450 plasmepsin 4 (PM4); Provisional 100.0
cd05475273 nucellin_like Nucellins, plant aspartic proteases 100.0
cd05473364 beta_secretase_like Beta-secretase, aspartic-acid 100.0
cd05476265 pepsin_A_like_plant Chroloplast Nucleoids DNA-bind 100.0
cd06097278 Aspergillopepsin_like Aspergillopepsin_like, aspar 100.0
PF00026317 Asp: Eukaryotic aspartyl protease The Prosite entr 100.0
cd05474295 SAP_like SAPs, pepsin-like proteinases secreted fr 100.0
cd05471283 pepsin_like Pepsin-like aspartic proteases, biloba 100.0
PF14543164 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 99.97
PF14541161 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 99.95
cd05470109 pepsin_retropepsin_like Cellular and retroviral pe 99.89
cd0548396 retropepsin_like_bacteria Bacterial aspartate prot 98.0
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 97.25
PF1365090 Asp_protease_2: Aspartyl protease 96.23
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 95.85
PF08284135 RVP_2: Retroviral aspartyl protease; InterPro: IPR 94.93
cd05479124 RP_DDI RP_DDI; retropepsin-like domain of DNA dama 94.7
TIGR02281121 clan_AA_DTGA clan AA aspartic protease, TIGR02281 94.66
TIGR03698107 clan_AA_DTGF clan AA aspartic protease, AF_0612 fa 92.24
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.93
cd0548491 retropepsin_like_LTR_2 Retropepsins_like_LTR, peps 91.93
PF12384177 Peptidase_A2B: Ty3 transposon peptidase; InterPro: 91.91
COG3577215 Predicted aspartyl protease [General function pred 90.93
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 89.76
PF11925370 DUF3443: Protein of unknown function (DUF3443); In 89.21
PF1365090 Asp_protease_2: Aspartyl protease 85.72
PF00077100 RVP: Retroviral aspartyl protease The Prosite entr 80.95
PF1397572 gag-asp_proteas: gag-polyprotein putative aspartyl 80.3
>PLN03146 aspartyl protease family protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.7e-72  Score=560.03  Aligned_cols=405  Identities=27%  Similarity=0.515  Sum_probs=327.6

Q ss_pred             cceeEEEEEccCCCCCCC-CCCCChHHHHHHHHhhhHHHHHHhhccccccccCCCCCCCCCCceeecceecccCccccEE
Q 046757            4 VVAVRMELIHRHSPKLNN-MPMMSEVERMKELLHNDIIRQNKRRGRRLRQTNNNNNNGASGSAIEMPLQAGRDYGTGMYF   82 (445)
Q Consensus         4 ~~~~~~~l~h~~s~~~~~-~~~~~~~~~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~Y~   82 (445)
                      .++++++|+||+++++|. +++.++.+.++++++|+.+|.+++..+..           ....+..++.    .++++|+
T Consensus        22 ~~~~~~~l~h~~~~~sp~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-----------~~~~~~~~~~----~~~~~Y~   86 (431)
T PLN03146         22 KGGFTVDLIHRDSPKSPFYNPSETPSQRLRNAFRRSISRVNHFRPTDA-----------SPNDPQSDLI----SNGGEYL   86 (431)
T ss_pred             CCceEEEEEeCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHhhccc-----------cCCccccCcc----cCCccEE
Confidence            357999999999999875 34567789999999999999877653211           1112223333    3448999


Q ss_pred             EEEEeCCCCceEEEEEEcCCCeeeeccCCCCCCCCCCCCccCCCCCCCcCCCCCCcccccCCCCccchhhhhcccCCCCC
Q 046757           83 VEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFC  162 (445)
Q Consensus        83 ~~i~iGTP~q~~~l~~DTGS~~~Wv~~~~~c~~~C~~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~c  162 (445)
                      ++|.||||+|++.|++||||+++||+|. +|.. |..+      ..+.|||++|+||+.++|+++.|+. +.   ....|
T Consensus        87 v~i~iGTPpq~~~vi~DTGS~l~Wv~C~-~C~~-C~~~------~~~~fdps~SST~~~~~C~s~~C~~-~~---~~~~c  154 (431)
T PLN03146         87 MNISIGTPPVPILAIADTGSDLIWTQCK-PCDD-CYKQ------VSPLFDPKKSSTYKDVSCDSSQCQA-LG---NQASC  154 (431)
T ss_pred             EEEEcCCCCceEEEEECCCCCcceEcCC-CCcc-cccC------CCCcccCCCCCCCcccCCCCccccc-CC---CCCCC
Confidence            9999999999999999999999999998 8875 8876      5689999999999999999999984 22   22346


Q ss_pred             CCCCCCCeeeeEeCCCCeEeEEEEEEEEEeeeCCCCceeeeeeEeeeeeccCCCCC-CCCceEEecCCCCCchhhhhhcC
Q 046757          163 PTPTSPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIF-AEADGVLGLSYDKYSFAQKVTNG  241 (445)
Q Consensus       163 ~~~~~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~v~~~~fG~~~~~~~~~~-~~~~GilGLg~~~~s~~~~l~~~  241 (445)
                      ... +.|.|.+.|+||+.+.|.+++|+|+|++..+..+.++++.|||++...+ .| ...+||||||++.+|+++||  .
T Consensus       155 ~~~-~~c~y~i~Ygdgs~~~G~l~~Dtltlg~~~~~~~~v~~~~FGc~~~~~g-~f~~~~~GilGLG~~~~Sl~sql--~  230 (431)
T PLN03146        155 SDE-NTCTYSYSYGDGSFTKGNLAVETLTIGSTSGRPVSFPGIVFGCGHNNGG-TFDEKGSGIVGLGGGPLSLISQL--G  230 (431)
T ss_pred             CCC-CCCeeEEEeCCCCceeeEEEEEEEEeccCCCCcceeCCEEEeCCCCCCC-CccCCCceeEecCCCCccHHHHh--h
Confidence            443 4699999999999789999999999986544446799999999998776 45 45899999999999999999  4


Q ss_pred             cCCCCCceEEeccCCCCCCCCcceEEECCCC-CCC-CeeeeeeecCCCCCCeeEEEeeEEECCEEeecCCcccccCCCCc
Q 046757          242 STFARGKFAYCLVDHLSHKNVSNYLIFGEES-KRM-RMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFNRGGG  319 (445)
Q Consensus       242 ~~i~~~~FS~~l~~~~~~~~~~g~l~fGg~d-~~~-~~~~~pl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~~~~~  319 (445)
                      ..++ ++|||||.+..+.....|.|+||+.. +.+ .+.|+||+.+....+|+|.|++|+||++.+.++...|...+.++
T Consensus       231 ~~~~-~~FSycL~~~~~~~~~~g~l~fG~~~~~~~~~~~~tPl~~~~~~~~y~V~L~gIsVgg~~l~~~~~~~~~~~~g~  309 (431)
T PLN03146        231 SSIG-GKFSYCLVPLSSDSNGTSKINFGTNAIVSGSGVVSTPLVSKDPDTFYYLTLEAISVGSKKLPYTGSSKNGVEEGN  309 (431)
T ss_pred             HhhC-CcEEEECCCCCCCCCCcceEEeCCccccCCCCceEcccccCCCCCeEEEeEEEEEECCEECcCCccccccCCCCc
Confidence            4566 69999997643222457999999975 333 58999998543357999999999999999888776653244568


Q ss_pred             EEEccccceeeechhhHHHHHHHHHHHhhccccCCCCCCcccccccCCCCccccCeEEEEEcCCCEEEeCCCceEEEeCC
Q 046757          320 TAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAH  399 (445)
Q Consensus       320 ~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yi~~~~~  399 (445)
                      +||||||++++||+++|++|+++|.+.+...........+..||+...  ...+|+|+|+| +|+++.||+++|+++..+
T Consensus       310 ~iiDSGTt~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~--~~~~P~i~~~F-~Ga~~~l~~~~~~~~~~~  386 (431)
T PLN03146        310 IIIDSGTTLTLLPSDFYSELESAVEEAIGGERVSDPQGLLSLCYSSTS--DIKLPIITAHF-TGADVKLQPLNTFVKVSE  386 (431)
T ss_pred             EEEeCCccceecCHHHHHHHHHHHHHHhccccCCCCCCCCCccccCCC--CCCCCeEEEEE-CCCeeecCcceeEEEcCC
Confidence            999999999999999999999999988864332222235679998542  25789999999 689999999999998766


Q ss_pred             ceEEEEEEeCCCCCceeechhhhceeEEEEeCCCCEEEEeeCCCCC
Q 046757          400 GIRCLGFVSATWPGASAIGNIMQQNYFWEFDLLKDRLGFAPSTCAT  445 (445)
Q Consensus       400 ~~~C~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~C~~  445 (445)
                      +..|+++....  +.+|||+.|||++|++||++++|||||+++|++
T Consensus       387 ~~~Cl~~~~~~--~~~IlG~~~q~~~~vvyDl~~~~igFa~~~C~~  430 (431)
T PLN03146        387 DLVCFAMIPTS--SIAIFGNLAQMNFLVGYDLESKTVSFKPTDCTK  430 (431)
T ss_pred             CcEEEEEecCC--CceEECeeeEeeEEEEEECCCCEEeeecCCcCc
Confidence            77899887653  469999999999999999999999999999975

>KOG1339 consensus Aspartyl protease [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00165 aspartyl protease; Provisional Back     alignment and domain information
>cd05478 pepsin_A Pepsin A, aspartic protease produced in gastric mucosa of mammals Back     alignment and domain information
>cd05490 Cathepsin_D2 Cathepsin_D2, pepsin family of proteinases Back     alignment and domain information
>cd05486 Cathespin_E Cathepsin E, non-lysosomal aspartic protease Back     alignment and domain information
>cd05472 cnd41_like Chloroplast Nucleoids DNA-binding Protease, catalyzes the degradation of ribulose-1,5-bisphosphate carboxylase/oxygenase Back     alignment and domain information
>cd05477 gastricsin Gastricsins, asparate proteases produced in gastric mucosa Back     alignment and domain information
>cd05488 Proteinase_A_fungi Fungal Proteinase A , aspartic proteinase superfamily Back     alignment and domain information
>cd06098 phytepsin Phytepsin, a plant homolog of mammalian lysosomal pepsins Back     alignment and domain information
>cd05485 Cathepsin_D_like Cathepsin_D_like, pepsin family of proteinases Back     alignment and domain information
>cd05487 renin_like Renin stimulates production of angiotensin and thus affects blood pressure Back     alignment and domain information
>cd06096 Plasmepsin_5 Plasmepsins are a class of aspartic proteinases produced by the plasmodium parasite Back     alignment and domain information
>cd05489 xylanase_inhibitor_I_like TAXI-I inhibits degradation of xylan in the cell wall Back     alignment and domain information
>PTZ00147 plasmepsin-1; Provisional Back     alignment and domain information
>PTZ00013 plasmepsin 4 (PM4); Provisional Back     alignment and domain information
>cd05475 nucellin_like Nucellins, plant aspartic proteases specifically expressed in nucellar cells during degradation Back     alignment and domain information
>cd05473 beta_secretase_like Beta-secretase, aspartic-acid protease important in the pathogenesis of Alzheimer's disease Back     alignment and domain information
>cd05476 pepsin_A_like_plant Chroloplast Nucleoids DNA-binding Protease and Nucellin, pepsin-like aspartic proteases from plants Back     alignment and domain information
>cd06097 Aspergillopepsin_like Aspergillopepsin_like, aspartic proteases of fungal origin Back     alignment and domain information
>PF00026 Asp: Eukaryotic aspartyl protease The Prosite entry also includes Pfam:PF00077 Back     alignment and domain information
>cd05474 SAP_like SAPs, pepsin-like proteinases secreted from pathogens to degrade host proteins Back     alignment and domain information
>cd05471 pepsin_like Pepsin-like aspartic proteases, bilobal enzymes that cleave bonds in peptides at acidic pH Back     alignment and domain information
>PF14543 TAXi_N: Xylanase inhibitor N-terminal; PDB: 3HD8_A 3VLB_A 3VLA_A 3AUP_D 1T6G_A 1T6E_X 2B42_A Back     alignment and domain information
>PF14541 TAXi_C: Xylanase inhibitor C-terminal; PDB: 3AUP_D 3HD8_A 1T6G_A 1T6E_X 2B42_A 3VLB_A 3VLA_A Back     alignment and domain information
>cd05470 pepsin_retropepsin_like Cellular and retroviral pepsin-like aspartate proteases Back     alignment and domain information
>cd05483 retropepsin_like_bacteria Bacterial aspartate proteases, retropepsin-like protease family Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>PF08284 RVP_2: Retroviral aspartyl protease; InterPro: IPR013242 This region defines single domain aspartyl proteases from retroviruses, retrotransposons, and badnaviruses (plant dsDNA viruses) Back     alignment and domain information
>cd05479 RP_DDI RP_DDI; retropepsin-like domain of DNA damage inducible protein Back     alignment and domain information
>TIGR02281 clan_AA_DTGA clan AA aspartic protease, TIGR02281 family Back     alignment and domain information
>TIGR03698 clan_AA_DTGF clan AA aspartic protease, AF_0612 family Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>cd05484 retropepsin_like_LTR_2 Retropepsins_like_LTR, pepsin-like aspartate proteases Back     alignment and domain information
>PF12384 Peptidase_A2B: Ty3 transposon peptidase; InterPro: IPR024650 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG3577 Predicted aspartyl protease [General function prediction only] Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information
>PF11925 DUF3443: Protein of unknown function (DUF3443); InterPro: IPR021847 This family of proteins are functionally uncharacterised Back     alignment and domain information
>PF13650 Asp_protease_2: Aspartyl protease Back     alignment and domain information
>PF00077 RVP: Retroviral aspartyl protease The Prosite entry also includes Pfam:PF00026; InterPro: IPR018061 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PF13975 gag-asp_proteas: gag-polyprotein putative aspartyl protease Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query445
3aup_A403 Crystal Structure Of Basic 7s Globulin From Soybean 3e-09
1t6e_X381 Crystal Structure Of The Triticum Aestivum Xylanase 1e-07
3hd8_A389 Crystal Structure Of The Triticum Aestivum Xylanase 1e-06
3vla_A413 Crystal Structure Of Edgp Length = 413 5e-06
3vlb_A413 Crystal Structure Of Xeg-Edgp Length = 413 6e-06
2b42_A381 Crystal Structure Of The Triticum Xylanse Inhibitor 9e-06
3fv3_A339 Secreted Aspartic Protease 1 From Candida Parapsilo 2e-05
1tzs_A351 Crystal Structure Of An Activation Intermediate Of 4e-05
1uh7_A325 Crystal Structure Of Rhizopuspepsin At Ph 4.6 Lengt 7e-05
3pep_A326 Revised 2.3 Angstroms Structure Of Porcine Pepsin. 8e-05
1htr_B329 Crystal And Molecular Structures Of Human Progastri 8e-05
3psg_A370 The High Resolution Crystal Structure Of Porcine Pe 9e-05
1am5_A324 The Crystal Structure And Proposed Amino Acid Seque 1e-04
4pep_A326 The Molecular And Crystal Structures Of Monoclinic 1e-04
1qdm_A478 Crystal Structure Of Prophytepsin, A Zymogen Of A B 1e-04
2psg_A370 Refined Structure Of Porcine Pepsinogen At 1.8 Angs 1e-04
1psa_A326 Structure Of A Pepsin(Slash)renin Inhibitor Complex 3e-04
5pep_A326 X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dim 3e-04
1f34_A326 Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bou 4e-04
1pso_E326 The Crystal Structure Of Human Pepsin And Its Compl 4e-04
1czi_E323 Chymosin Complex With The Inhibitor Cp-113972 Lengt 4e-04
3apr_E325 Binding Of A Reduced Peptide Inhibitor To The Aspar 6e-04
1flh_A326 Crystal Structure Of Human Uropepsin At 2.45 A Reso 6e-04
1g0v_A329 The Structure Of Proteinase A Complexed With A Ia3 7e-04
>pdb|3AUP|A Chain A, Crystal Structure Of Basic 7s Globulin From Soybean Length = 403 Back     alignment and structure 
Iteration: 1

 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 78/407 (19%), Positives = 143/407 (35%), Gaps = 60/407 (14%)
Query: 66  IEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAG 125
           + +P+Q   D  TG+++  ++  TP  ++ ++VD      W++C                
Sbjct: 10  VVLPVQ--NDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYS----------- 56
Query: 126 SRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAK--- 182
                     S +++   C S  C    A       CP  + P  +       S      
Sbjct: 57  ----------SKTYQAPFCHSTQCSR--ANTHQCLSCPAASRPGCHKNTCGLMSTNPITQ 104
Query: 183 ----GIFGKERVTIGLENGGKTR------IEEVVMGCSDT--IQGQIFAEADGVLGLSYD 230
               G  G++ + I    G   +      + + +  C+ +  +Q  +     GV GL + 
Sbjct: 105 QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHA 164
Query: 231 KYSFAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESKRMRM------------- 277
             S   ++ +     R +F  CL  + + K     +IFG+    MR              
Sbjct: 165 PISLPNQLASHFGLQR-QFTTCLSRYPTSKGA---IIFGDAPNNMRQFQNQDIFHDLAFT 220
Query: 278 RMRYTLLGLIGPDYXXXXXXXXXXXXMLNIPSQVWDFNRGGGTAFDSGTTLTFLAEPAYK 337
            +  TL G                  +  I S +   +  GGT   + T    L +  Y+
Sbjct: 221 PLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVG-STSGGTMISTSTPHMVLQQSVYQ 279
Query: 338 PVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRV 397
                    L +  ++K  APF  CFNS   +      LV    +G  +    +  +++ 
Sbjct: 280 AFTQVFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQA 339
Query: 398 AHGIRCLGFVS-ATWPGAS-AIGNIMQQNYFWEFDLLKDRLGFAPST 442
             G+ CLG ++    P A   +G    +     FDL + R+GF+ S+
Sbjct: 340 QPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSS 386
>pdb|1T6E|X Chain X, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor I Length = 381 Back     alignment and structure
>pdb|3HD8|A Chain A, Crystal Structure Of The Triticum Aestivum Xylanase Inhibitor-Iia In Complex With Bacillus Subtilis Xylanase Length = 389 Back     alignment and structure
>pdb|3VLA|A Chain A, Crystal Structure Of Edgp Length = 413 Back     alignment and structure
>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp Length = 413 Back     alignment and structure
>pdb|2B42|A Chain A, Crystal Structure Of The Triticum Xylanse Inhibitor-I In Complex With Bacillus Subtilis Xylanase Length = 381 Back     alignment and structure
>pdb|3FV3|A Chain A, Secreted Aspartic Protease 1 From Candida Parapsilosis In Complex With Pepstatin A Length = 339 Back     alignment and structure
>pdb|1TZS|A Chain A, Crystal Structure Of An Activation Intermediate Of Cathepsin E Length = 351 Back     alignment and structure
>pdb|1UH7|A Chain A, Crystal Structure Of Rhizopuspepsin At Ph 4.6 Length = 325 Back     alignment and structure
>pdb|3PEP|A Chain A, Revised 2.3 Angstroms Structure Of Porcine Pepsin. Evidence For A Flexible Subdomain Length = 326 Back     alignment and structure
>pdb|1HTR|B Chain B, Crystal And Molecular Structures Of Human Progastricsin At 1.62 Angstroms Resolution Length = 329 Back     alignment and structure
>pdb|3PSG|A Chain A, The High Resolution Crystal Structure Of Porcine Pepsinogen Length = 370 Back     alignment and structure
>pdb|1AM5|A Chain A, The Crystal Structure And Proposed Amino Acid Sequence Of A Pepsin From Atlantic Cod (Gadus Morhua) Length = 324 Back     alignment and structure
>pdb|4PEP|A Chain A, The Molecular And Crystal Structures Of Monoclinic Porcine Pepsin Refined At 1.8 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|1QDM|A Chain A, Crystal Structure Of Prophytepsin, A Zymogen Of A Barley Vacuolar Aspartic Proteinase. Length = 478 Back     alignment and structure
>pdb|2PSG|A Chain A, Refined Structure Of Porcine Pepsinogen At 1.8 Angstroms Resolution Length = 370 Back     alignment and structure
>pdb|1PSA|A Chain A, Structure Of A Pepsin(Slash)renin Inhibitor Complex Reveals A Novel Crystal Packing Induced By Minor Chemical Alterations In The Inhibitor Length = 326 Back     alignment and structure
>pdb|5PEP|A Chain A, X-Ray Analyses Of Aspartic Proteases. Ii. Three-Dimensional Structure Of The Hexagonal Crystal Form Of Porcine Pepsin At 2.3 Angstroms Resolution Length = 326 Back     alignment and structure
>pdb|1F34|A Chain A, Crystal Structure Of Ascaris Pepsin Inhibitor-3 Bound To Porcine Pepsin Length = 326 Back     alignment and structure
>pdb|1PSO|E Chain E, The Crystal Structure Of Human Pepsin And Its Complex With Pepstatin Length = 326 Back     alignment and structure
>pdb|1CZI|E Chain E, Chymosin Complex With The Inhibitor Cp-113972 Length = 323 Back     alignment and structure
>pdb|3APR|E Chain E, Binding Of A Reduced Peptide Inhibitor To The Aspartic Proteinase From Rhizopus Chinensis. Implications For A Mechanism Of Action Length = 325 Back     alignment and structure
>pdb|1FLH|A Chain A, Crystal Structure Of Human Uropepsin At 2.45 A Resolution Length = 326 Back     alignment and structure
>pdb|1G0V|A Chain A, The Structure Of Proteinase A Complexed With A Ia3 Mutant, Mvv Length = 329 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query445
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 2e-81
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 3e-73
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 1e-69
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 7e-27
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 6e-26
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 7e-26
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 2e-24
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 2e-24
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 1e-23
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 7e-23
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 8e-23
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 2e-22
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 2e-21
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 4e-21
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 1e-20
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 3e-20
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 6e-19
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 7e-19
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 1e-18
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 1e-18
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 3e-18
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 3e-18
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 5e-18
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 1e-17
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 1e-17
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 2e-17
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 6e-17
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 6e-17
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 2e-16
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 2e-16
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 4e-16
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 2e-13
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-09
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 2e-07
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 3e-04
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Length = 403 Back     alignment and structure
 Score =  255 bits (653), Expect = 2e-81
 Identities = 74/404 (18%), Positives = 144/404 (35%), Gaps = 44/404 (10%)

Query: 62  SGSAIEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKG 121
             + + +P+Q   D  TG+++  ++  TP  ++ ++VD      W++C      S T + 
Sbjct: 6   PINLVVLPVQ--NDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE-QQYSSKTYQA 62

Query: 122 TIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAA 181
                      +   S   T  C S    S          C   T               
Sbjct: 63  PF-------CHSTQCSRANTHQCLSCPAAS-------RPGCHKNTC-GLMSTNPITQQTG 107

Query: 182 KGIFGKERVTIGLENGGKTR------IEEVVMGCSDTIQGQ--IFAEADGVLGLSYDKYS 233
            G  G++ + I    G   +      + + +  C+ +   Q  +     GV GL +   S
Sbjct: 108 LGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPIS 167

Query: 234 FAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEE--------SKRMRMRMRYT-LL 284
              ++       + +F  CL  + +       +IFG+         ++ +   + +T L 
Sbjct: 168 LPNQL-ASHFGLQRQFTTCLSRYPTS---KGAIIFGDAPNNMRQFQNQDIFHDLAFTPLT 223

Query: 285 GLIGPDYGVSVKGISIGGVMLNIPSQ---VWDFNRGGGTAFDSGTTLTFLAEPAYKPVVA 341
             +  +Y V V  I I    +   ++       +  GGT   + T    L +  Y+    
Sbjct: 224 ITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQ 283

Query: 342 ALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYIIRVAHGI 401
                L +  ++K  APF  CFNS   +      LV    +G  +    +  +++   G+
Sbjct: 284 VFAQQLPKQAQVKSVAPFGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQPGV 343

Query: 402 RCLGFVSATWPGASA--IGNIMQQNYFWEFDLLKDRLGFAPSTC 443
            CLG ++      +   +G    +     FDL + R+GF+ S+ 
Sbjct: 344 TCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSSL 387
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Length = 381 Back     alignment and structure
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Length = 413 Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} PDB: 3tne_A* Length = 339 Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Length = 342 Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Length = 342 Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Length = 455 Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Length = 334 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Length = 395 Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Length = 329 Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Length = 383 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Length = 329 Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Length = 325 Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Length = 329 Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Length = 351 Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Length = 323 Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Length = 453 Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Length = 324 Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Length = 341 Back     alignment and structure
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Length = 370 Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Length = 451 Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Length = 383 Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Length = 329 Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Length = 323 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Length = 361 Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Length = 375 Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Length = 323 Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Length = 325 Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Length = 330 Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Length = 478 Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Length = 340 Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 239 Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Length = 97 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Length = 241 Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Length = 87 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query445
3vla_A413 EDGP; extracellular, inhibitor, plant protein; HET 100.0
3psg_A370 Pepsinogen; hydrolase(acid proteinase zymogen); 1. 100.0
3aup_A403 SBG7S, BG, basic 7S globulin; pepsin-like fold, pl 100.0
1tzs_A351 Cathepsin E; hydrolase, aspartic protease, activat 100.0
2x0b_A383 Renin; hydrolase-hormone complex, hydrolase hormon 100.0
1dpj_A329 Proteinase A; proteinase A, hydrolase-hydrolase in 100.0
3cms_A323 Chymosin B; hydrolase, acid proteinase; 2.00A {Bos 100.0
1am5_A324 Pepsin, acid proteinase; aspartyl protease, hydrol 100.0
4aa9_A320 Chymosin; hydrolase, aspartic peptidase, rennet; H 100.0
3fv3_A339 SAPP1P-secreted aspartic protease 1; secreted aspa 100.0
1j71_A334 Candidapepsin, aspartic proteinase; candida tropic 100.0
1mpp_A361 Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomu 100.0
2qzx_A342 Candidapepsin-5; aspartic proteinase, aspartyl pro 100.0
1htr_B329 Gastricsin; aspartyl protease; 1.62A {Homo sapiens 100.0
2apr_A325 Rhizopuspepsin; hydrolase (aspartic proteinase); 1 100.0
3k1w_A341 Renin; protease, alternative splicing, aspartyl pr 100.0
3pvk_A342 Candidapepsin-2; hydrolase; 1.27A {Candida albican 100.0
1miq_A375 Plasmepsin; aspartic proteinase zymogen, domain op 100.0
2bju_A453 Plasmepsin II; aspartic proteinase, drug design, m 100.0
1qdm_A478 Prophytepsin; aspartic proteinases, saposin-like d 100.0
3c9x_A329 Trichoderma reesei aspartic protease; aspartic pro 100.0
1yg9_A330 Aspartic protease BLA G 2; allegren, hydrolase, al 100.0
1t6e_X381 Xylanase inhibitor; two beta-barrel domain structu 100.0
3qvc_A451 Histo-aspartic protease; HAP, plasmepsin, zymogen, 100.0
1oew_A329 Endothiapepsin; hydrolase, aspartic proteinase mec 100.0
1wkr_A340 Polyporopepsin; hydrolase, hydrolase-hydrolase inh 100.0
3vf3_A402 Beta-secretase 1; structure-based drug design, hyd 100.0
2ewy_A383 Beta-secretase 2; BACE2, aspartic protease, hydrol 100.0
3lpj_A455 Beta-secretase 1; alzheimer'S, aspartyl protease, 100.0
1ibq_A325 Aspergillopepsin; aspartic proteinase, hydrolase; 100.0
2qp8_A395 Beta-secretase 1; BACE1, protease, alternative spl 100.0
1izd_A323 Aspartic proteinase; sugar binding, acid protease, 100.0
1bxo_A323 Protein (penicillopepsin); hydrolase, phosphonate 100.0
1b5f_A239 Protein (cardosin A); hydrolase, aspartic proteina 100.0
1lya_B241 Cathepsin D; lysosomal aspartic protease; HET: NAG 100.0
1lya_A97 Cathepsin D; lysosomal aspartic protease; HET: NAG 99.88
1b5f_B87 Protein (cardosin A); hydrolase, aspartic proteina 99.7
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 94.1
2i1a_A148 DNA damage-inducible protein DDI1; acid protease f 93.61
3s8i_A148 Protein DDI1 homolog 1; protease, structural genom 93.57
2hs1_A99 HIV-1 protease; ultra-high resolution active site 83.73
1fmb_A104 EIAV protease; hydrolase (acid proteinase), RNA-di 83.71
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A Back     alignment and structure
Probab=100.00  E-value=8.7e-63  Score=493.03  Aligned_cols=352  Identities=21%  Similarity=0.396  Sum_probs=288.0

Q ss_pred             CCCceeecceecccCccccEEEEEEeCCCCceEEEEEEcCCCeeeeccCCCCCCCCCCCCccCCCCCCCcCCCCCCcccc
Q 046757           62 SGSAIEMPLQAGRDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKT  141 (445)
Q Consensus        62 ~~~~~~~pl~~~~~~~~~~Y~~~i~iGTP~q~~~l~~DTGS~~~Wv~~~~~c~~~C~~~~~~~~~~~~~f~p~~Sst~~~  141 (445)
                      ...++.+||+..  ..+++|+++|.||||+|++.|+|||||+++||+|. +|                    .+|+||+.
T Consensus         5 ~~~~~~~pv~~d--~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~-~c--------------------~~Sst~~~   61 (413)
T 3vla_A            5 RPSALVVPVKKD--ASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD-QN--------------------YVSSTYRP   61 (413)
T ss_dssp             CCSEEEEEEEEC--TTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS-SS--------------------CCCTTCEE
T ss_pred             CCccEEEEeeec--CCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC-CC--------------------CCCCCcCc
Confidence            356788999874  46799999999999999999999999999999998 33                    36899999


Q ss_pred             cCCCCccchhhhhcccCCCCCCC------CCCCCeeeeEe-CCCCeEeEEEEEEEEEeeeCCCC----ceeeeeeEeeee
Q 046757          142 IPCSSDMCKSEFARLFSLTFCPT------PTSPCAYDYRY-ADGSAAKGIFGKERVTIGLENGG----KTRIEEVVMGCS  210 (445)
Q Consensus       142 ~~c~~~~C~~~~~~~~~~~~c~~------~~~~~~~~~~Y-~~gs~~~G~~~~D~v~i~~~~~~----~~~v~~~~fG~~  210 (445)
                      +.|.++.|...  ..+.+..|..      ..+.|.|.+.| ++++.+.|++++|+|+|+..++.    .+.++++.|||+
T Consensus        62 v~C~s~~C~~~--~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~  139 (413)
T 3vla_A           62 VRCRTSQCSLS--GSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCA  139 (413)
T ss_dssp             CBTTSHHHHHT--TCCEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEE
T ss_pred             cCCCccccccc--ccCCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECc
Confidence            99999999953  2244433332      13469999999 48888999999999999865443    478899999999


Q ss_pred             eccCC-CCCCCCceEEecCCCCCchhhhhhcCcCCCCCceEEeccCCCCCCCCcceEEECCCCC--------CCC-eeee
Q 046757          211 DTIQG-QIFAEADGVLGLSYDKYSFAQKVTNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEESK--------RMR-MRMR  280 (445)
Q Consensus       211 ~~~~~-~~~~~~~GilGLg~~~~s~~~~l~~~~~i~~~~FS~~l~~~~~~~~~~g~l~fGg~d~--------~~~-~~~~  280 (445)
                      +.... ..+..++||||||++.+|++.||.+++.+ +++|||||.+.   ....|.|+||+.|.        .++ ++|+
T Consensus       140 ~~~~~~g~~~~~dGIlGLg~~~lSl~sql~~~~~i-~~~FS~cL~~~---~~~~G~l~fGg~~~~~~p~~~~~g~~l~~t  215 (413)
T 3vla_A          140 PTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSF-KRKFAMCLSGS---TSSNSVIIFGNDPYTFLPNIIVSDKTLTYT  215 (413)
T ss_dssp             CGGGGTTSCTTCCEEEECSSSSSSHHHHHHHHHTC-CSEEEEECCSC---SSSCEEEEEESCCEEETTTEEECTTTSEEE
T ss_pred             ccccccCcccccccccccCCCCcchHHHHhhhcCC-CceEEEeCCCC---CCCceEEEECCCcccccccccccCCceeEe
Confidence            98632 13467899999999999999999988888 59999999874   34579999999872        467 9999


Q ss_pred             eeecCCC-----------CCCeeEEEeeEEECCEEeecCCccccc--CCCCcEEEccccceeeechhhHHHHHHHHHHHh
Q 046757          281 YTLLGLI-----------GPDYGVSVKGISIGGVMLNIPSQVWDF--NRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSL  347 (445)
Q Consensus       281 pl~~~~~-----------~~~y~v~l~~i~vg~~~~~~~~~~~~~--~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~  347 (445)
                      ||+.++.           ..+|+|.|++|+||++.+.++...|..  .+++++||||||++++||+++|++|+++|.+.+
T Consensus       216 Pl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~  295 (413)
T 3vla_A          216 PLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKES  295 (413)
T ss_dssp             ECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHH
T ss_pred             ecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHh
Confidence            9997541           269999999999999999887766642  245789999999999999999999999999877


Q ss_pred             h--ccccCCCCCCcccccccCCCC----ccccCeEEEEEcC-CCEEEeCCCceEEEeCCceEEEEEEeCCC--CCceeec
Q 046757          348 S--RYQRLKRDAPFEYCFNSTGFD----ESSVPKLVFHFAD-GARFEPHTKSYIIRVAHGIRCLGFVSATW--PGASAIG  418 (445)
Q Consensus       348 ~--~~~~~~~~~~~~~C~~~~~~~----~~~~P~l~f~f~g-g~~~~l~~~~yi~~~~~~~~C~~~~~~~~--~~~~ilG  418 (445)
                      .  +++.......+..||..++..    ...+|+|+|+|+| ++.|+||+++|+++..++..|++|+..+.  ...||||
T Consensus       296 ~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~~~~Cl~~~~~~~~~~~~~IlG  375 (413)
T 3vla_A          296 AARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYINDNVVCLGVVDGGSNLRTSIVIG  375 (413)
T ss_dssp             HHTTCCEECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEETTEEEECEEEEESSCSSSEEEC
T ss_pred             cccCCCcCCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCCCcEEEEEEecCCCcccceeEe
Confidence            5  333333223578999887542    1479999999954 38999999999998766778998877642  2579999


Q ss_pred             hhhhceeEEEEeCCCCEEEEeeCC
Q 046757          419 NIMQQNYFWEFDLLKDRLGFAPST  442 (445)
Q Consensus       419 ~~fl~~~y~vfD~~~~~igfa~~~  442 (445)
                      +.|||++|+|||++++|||||++.
T Consensus       376 d~fl~~~~vvfD~~~~riGfa~~~  399 (413)
T 3vla_A          376 GHQLEDNLVQFDLATSRVGFSGTL  399 (413)
T ss_dssp             HHHHTTEEEEEETTTTEEEEEEEG
T ss_pred             hhhhcCeEEEEECCCCEEEEEEec
Confidence            999999999999999999999853
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A Back     alignment and structure
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max} Back     alignment and structure
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens} Back     alignment and structure
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens} Back     alignment and structure
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A* Back     alignment and structure
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A Back     alignment and structure
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2 Back     alignment and structure
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A Back     alignment and structure
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A* Back     alignment and structure
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2 Back     alignment and structure
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A* Back     alignment and structure
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans} Back     alignment and structure
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A Back     alignment and structure
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A Back     alignment and structure
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ... Back     alignment and structure
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A* Back     alignment and structure
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A* Back     alignment and structure
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ... Back     alignment and structure
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2 Back     alignment and structure
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A* Back     alignment and structure
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A* Back     alignment and structure
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A Back     alignment and structure
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A* Back     alignment and structure
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ... Back     alignment and structure
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2 Back     alignment and structure
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ... Back     alignment and structure
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens} Back     alignment and structure
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A* Back     alignment and structure
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2 Back     alignment and structure
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ... Back     alignment and structure
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A* Back     alignment and structure
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A Back     alignment and structure
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B* Back     alignment and structure
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A* Back     alignment and structure
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2 Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens} Back     alignment and structure
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ... Back     alignment and structure
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 445
d1t6ex_381 b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Tr 2e-51
g1lya.1338 b.50.1.2 (A:,B:) Cathepsin D {Human (Homo sapiens) 2e-35
d3cmsa_323 b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos 5e-35
d1eaga_342 b.50.1.2 (A:) Acid protease {Yeast (Candida albica 3e-33
d1j71a_334 b.50.1.2 (A:) Acid protease {Yeast (Candida tropic 1e-32
d2qp8a1387 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Hum 3e-32
d1dpja_329 b.50.1.2 (A:) Acid protease {Baker's yeast (Saccha 2e-31
d1miqa_373 b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading e 3e-31
d2apra_325 b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus 4e-31
d1qdma2337 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase 2e-28
d1oewa_330 b.50.1.2 (A:) Endothiapepsin {Chestnut blight fung 5e-28
g1b5f.1326 b.50.1.2 (A:,B:) Plant acid proteinase, phytepsin 3e-27
d3psga_370 b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxI 5e-27
g1htr.1372 b.50.1.2 (P:,B:) Pepsin(ogen) {Human (Homo sapiens 5e-27
d1mppa_357 b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840] 6e-27
d1am5a_324 b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus mo 2e-26
d1smra_335 b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mu 3e-26
d1izea_323 b.50.1.2 (A:) Acid protease {Fungus (Aspergillus o 4e-25
d1bxoa_323 b.50.1.2 (A:) Acid protease {Fungus (Penicillium j 6e-25
d2bjua1329 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrad 6e-25
d1hrna_337 b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Ho 1e-24
d1wkra_340 b.50.1.2 (A:) Acid protease {Irpex lacteus (Polypo 7e-20
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Length = 381 Back     information, alignment and structure

class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Xylanase inhibitor TAXI-I
species: Wheat (Triticum aestivum) [TaxId: 4565]

 Score =  176 bits (446), Expect = 2e-51
 Identities = 71/397 (17%), Positives = 132/397 (33%), Gaps = 54/397 (13%)

Query: 74  RDYGTGMYFVEIKVGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKA 133
           +D  T +Y +    G       L++D      W +C     P+     +           
Sbjct: 9   KDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCSSPTCL------- 56

Query: 134 DLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPTSPCAYDYRYADGSAAKGIFGKERVTIG 193
            L++++    C +  C S                  AY Y    G+ A G     R    
Sbjct: 57  -LANAYPAPGCPAPSCGS----------DKHDKPCTAYPYNPVSGACAAGSLSHTRFVAN 105

Query: 194 LENGGKTRIEE---VVMGCSDTIQGQ-IFAEADGVLGLSYDKYSFAQKVTNGSTFARGKF 249
             +G K   +    V+  C+ +     +   + GV GL+    +   +V +         
Sbjct: 106 TTDGSKPVSKVNVGVLAACAPSKLLASLPRGSTGVAGLANSGLALPAQVASAQKV---AN 162

Query: 250 AYCLVDHLSHKNVSNYLIFGEESKRMRMRMRYTLLGLIG--PDYGVSVKGISIGGVMLNI 307
            + L        V+ +        +    M YT L   G  P + +S + I +G   + +
Sbjct: 163 RFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPV 222

Query: 308 PSQVWDFNRGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQ--------RLKRDAPF 359
           P         GG    +      L    Y+P++ A   +L+            ++  APF
Sbjct: 223 PEGALA---TGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPF 279

Query: 360 EYCFNSTG----FDESSVPKLVFHFADGARFEPHTKSYIIRVAHGIRCLGFVSATWPGAS 415
             C+++          +VP +      G+ +    K+ ++ V  G  C+ FV      A 
Sbjct: 280 GVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQGTACVAFVEMKGVAAG 339

Query: 416 A-------IGNIMQQNYFWEFDLLKDRLGFAPSTCAT 445
                   +G    +++  +FD+ K RLGF+     T
Sbjct: 340 DGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLPHFT 376
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Length = 323 Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Length = 342 Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 334 Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Length = 387 Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Length = 329 Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Length = 373 Back     information, alignment and structure
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Length = 325 Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 337 Back     information, alignment and structure
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Length = 370 Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Length = 357 Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Length = 324 Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Length = 335 Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Length = 323 Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Length = 323 Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Length = 329 Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Length = 340 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query445
d3psga_370 Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} 100.0
g1htr.1372 Pepsin(ogen) {Human (Homo sapiens), progastricsin 100.0
d2apra_325 Acid protease {Bread mold (Rhizopus chinensis) [Ta 100.0
d1dpja_329 Acid protease {Baker's yeast (Saccharomyces cerevi 100.0
d1j71a_334 Acid protease {Yeast (Candida tropicalis) [TaxId: 100.0
d1oewa_330 Endothiapepsin {Chestnut blight fungus (Endothia p 100.0
d1am5a_324 Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 100.0
d1miqa_373 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1smra_335 Chymosin (synonym: renin) {Mouse (Mus musculus) [T 100.0
d1eaga_342 Acid protease {Yeast (Candida albicans) [TaxId: 54 100.0
d1hrna_337 Chymosin (synonym: renin) {Human (Homo sapiens) [T 100.0
d1mppa_357 Pepsin {Mucor pusillus [TaxId: 4840]} 100.0
d3cmsa_323 Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId 100.0
g1lya.1338 Cathepsin D {Human (Homo sapiens) [TaxId: 9606]} 100.0
d2qp8a1387 beta-secretase (memapsin) {Human (Homo sapiens) [T 100.0
d1wkra_340 Acid protease {Irpex lacteus (Polyporus tulipifera 100.0
d1izea_323 Acid protease {Fungus (Aspergillus oryzae) [TaxId: 100.0
d2bjua1329 Plasmepsin (a hemoglobin-degrading enzyme) {Plasmo 100.0
d1t6ex_381 Xylanase inhibitor TAXI-I {Wheat (Triticum aestivu 100.0
d1qdma2337 Plant acid proteinase, phytepsin {Barley (Hordeum 100.0
g1b5f.1326 Plant acid proteinase, phytepsin {Cynara carduncul 100.0
d1bxoa_323 Acid protease {Fungus (Penicillium janthinellum), 100.0
>d3psga_ b.50.1.2 (A:) Pepsin(ogen) {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: All beta proteins
fold: Acid proteases
superfamily: Acid proteases
family: Pepsin-like
domain: Pepsin(ogen)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=4.5e-58  Score=452.55  Aligned_cols=353  Identities=22%  Similarity=0.386  Sum_probs=275.7

Q ss_pred             eEEEEEccCCCCCCCCCCCChHHHHHHHHhhhHHHHHHhhccccccccCCCCCCCCCCceeecceecccCccccEEEEEE
Q 046757            7 VRMELIHRHSPKLNNMPMMSEVERMKELLHNDIIRQNKRRGRRLRQTNNNNNNGASGSAIEMPLQAGRDYGTGMYFVEIK   86 (445)
Q Consensus         7 ~~~~l~h~~s~~~~~~~~~~~~~~~~~~~~~d~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~~~~~Y~~~i~   86 (445)
                      +++||.++.+              +++.++++..+.++++.+....... ............||.+..+   .+|+++|.
T Consensus         2 v~ipl~k~~~--------------~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~n~~d---~~Y~~~i~   63 (370)
T d3psga_           2 VKVPLVRKKS--------------LRQNLIKDGKLKDFLKTHKHNPASK-YFPEAAALIGDEPLENYLD---TEYFGTIG   63 (370)
T ss_dssp             EEEEEEECCC--------------HHHHHHHTTCHHHHHHHCCCCGGGG-TCTTSCCSSCCCTTGGGTT---CCEEEEEE
T ss_pred             EEEecccCcc--------------HHHHHHHcCcHHHHHHhcccchhhh-hcccccCcccccccccccC---CEEEEEEE
Confidence            4677776642              4566566655555544332211000 1111223445578887654   89999999


Q ss_pred             eCCCCceEEEEEEcCCCeeeeccCCCCCCCCCCCCccCCCCCCCcCCCCCCcccccCCCCccchhhhhcccCCCCCCCCC
Q 046757           87 VGTPSQKLRLIVDTGSEFSWISCRYHCGPSCTKKGTIAGSRRRVFKADLSSSFKTIPCSSDMCKSEFARLFSLTFCPTPT  166 (445)
Q Consensus        87 iGTP~q~~~l~~DTGS~~~Wv~~~~~c~~~C~~~~~~~~~~~~~f~p~~Sst~~~~~c~~~~C~~~~~~~~~~~~c~~~~  166 (445)
                      ||||+|++.|+|||||+++||+|. .|.. |..+      ..+.|||++|+||+...                       
T Consensus        64 iGtP~Q~~~vi~DTGSs~~Wv~~~-~C~~-~~~~------~~~~yd~~~Sst~~~~~-----------------------  112 (370)
T d3psga_          64 IGTPAQDFTVIFDTGSSNLWVPSV-YCSS-LACS------DHNQFNPDDSSTFEATS-----------------------  112 (370)
T ss_dssp             ETTTTEEEEEEEETTCCCEEEEBT-TCCS-GGGT------TSCCBCGGGCTTCEEEE-----------------------
T ss_pred             EcCCCeEEEEEEeCCCCCeEEECc-cCCC-cccc------cccccCCCcccccccCC-----------------------
Confidence            999999999999999999999999 6775 5444      45899999999998865                       


Q ss_pred             CCCeeeeEeCCCCeEeEEEEEEEEEeeeCCCCceeeeeeEeeeeeccCCCCC--CCCceEEecCCCCC------chhhhh
Q 046757          167 SPCAYDYRYADGSAAKGIFGKERVTIGLENGGKTRIEEVVMGCSDTIQGQIF--AEADGVLGLSYDKY------SFAQKV  238 (445)
Q Consensus       167 ~~~~~~~~Y~~gs~~~G~~~~D~v~i~~~~~~~~~v~~~~fG~~~~~~~~~~--~~~~GilGLg~~~~------s~~~~l  238 (445)
                        |.|.+.|++|+ +.|.++.|++.++     ...++++.||++....+..+  ...+||+|||++..      .++.++
T Consensus       113 --~~~~~~Yg~Gs-~~G~~~~d~~~~~-----~~~~~~~~f~~~~~~~~~~~~~~~~~Gi~gl~~~~~~~~~~~~~~~~l  184 (370)
T d3psga_         113 --QELSITYGTGS-MTGILGYDTVQVG-----GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNL  184 (370)
T ss_dssp             --EEEEEESSSCE-EEEEEEEEEEEET-----TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHH
T ss_pred             --CcEEEEeCCce-EEEEEEEEEEeee-----ceeeeeeEEEEEeeccCceecccccccccccccCcccccCCCchhhhh
Confidence              68999999998 9999999999999     78999999999998876433  57899999998755      478889


Q ss_pred             hcCcCCCCCceEEeccCCCCCCCCcceEEECCCC---CCCCeeeeeeecCCCCCCeeEEEeeEEECCEEeecCCcccccC
Q 046757          239 TNGSTFARGKFAYCLVDHLSHKNVSNYLIFGEES---KRMRMRMRYTLLGLIGPDYGVSVKGISIGGVMLNIPSQVWDFN  315 (445)
Q Consensus       239 ~~~~~i~~~~FS~~l~~~~~~~~~~g~l~fGg~d---~~~~~~~~pl~~~~~~~~y~v~l~~i~vg~~~~~~~~~~~~~~  315 (445)
                      ++++.|+.+.||+|+.+.   ...+|.|+|||+|   +.++++|+|+.   ...+|.|.++++.++++.+..       .
T Consensus       185 ~~~~~i~~~~fs~~l~~~---~~~~g~l~~Gg~d~~~~~~~l~~~p~~---~~~~w~v~~~~i~v~g~~~~~-------~  251 (370)
T d3psga_         185 WDQGLVSQDLFSVYLSSN---DDSGSVVLLGGIDSSYYTGSLNWVPVS---VEGYWQITLDSITMDGETIAC-------S  251 (370)
T ss_dssp             HHTTCSSSSEEEEEEC--------CEEEEETCCCGGGBSSCCEEEECS---EETTEEEEECEEESSSSEEEC-------T
T ss_pred             hhhcccccceeEEEeecC---CCCCceEecCCcCchhcccceeEEeec---ccceEEEEEeeEEeCCeEEec-------C
Confidence            999999999999999765   3457999999998   67899999998   468999999999999987764       3


Q ss_pred             CCCcEEEccccceeeechhhHHHHHHHHHHHhhccccCCCCCCcccccccCCCCccccCeEEEEEcCCCEEEeCCCceEE
Q 046757          316 RGGGTAFDSGTTLTFLAEPAYKPVVAALEMSLSRYQRLKRDAPFEYCFNSTGFDESSVPKLVFHFADGARFEPHTKSYII  395 (445)
Q Consensus       316 ~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~l~f~f~gg~~~~l~~~~yi~  395 (445)
                      .+..+||||||++++||+++|++|.+++.+    ....... +...|+.     ...+|+|+|+| +|+++.|++++|++
T Consensus       252 ~~~~aiiDSGTs~~~lp~~~~~~i~~~l~~----~~~~~~~-~~~~C~~-----~~~~P~l~f~f-~g~~~~l~~~~yi~  320 (370)
T d3psga_         252 GGCQAIVDTGTSLLTGPTSAIANIQSDIGA----SENSDGE-MVISCSS-----IDSLPDIVFTI-DGVQYPLSPSAYIL  320 (370)
T ss_dssp             TCEEEEECTTCCSEEEEHHHHHHHHHHTTC----EECTTCC-EECCGGG-----GGGCCCEEEEE-TTEEEEECHHHHEE
T ss_pred             CCccEEEecCCceEeCCHHHHHHHHHHhCC----eeecCCc-EEEeccc-----cCCCceEEEEE-CCEEEEEChHHeEE
Confidence            456799999999999999999988887742    2222222 4455654     56799999999 89999999999999


Q ss_pred             EeCCceEEE-EEEeCC----CCCceeechhhhceeEEEEeCCCCEEEEeeCC
Q 046757          396 RVAHGIRCL-GFVSAT----WPGASAIGNIMQQNYFWEFDLLKDRLGFAPST  442 (445)
Q Consensus       396 ~~~~~~~C~-~~~~~~----~~~~~ilG~~fl~~~y~vfD~~~~~igfa~~~  442 (445)
                      +..+  .|+ +|...+    ..+.||||++|||++|+|||++++||||||+.
T Consensus       321 ~~~~--~c~~~~~~~~~~~~~~~~~ILG~~flr~~y~vfD~~~~~IGfAp~a  370 (370)
T d3psga_         321 QDDD--SCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA  370 (370)
T ss_dssp             ECSS--CEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred             EcCC--eEEEEEEEcccCCCCCCcEEECHHhhcCEEEEEECCCCEEEEEecC
Confidence            7543  375 565432    23579999999999999999999999999974
>d2apra_ b.50.1.2 (A:) Acid protease {Bread mold (Rhizopus chinensis) [TaxId: 4843]} Back     information, alignment and structure
>d1dpja_ b.50.1.2 (A:) Acid protease {Baker's yeast (Saccharomyces cerevisiae), proteinase A [TaxId: 4932]} Back     information, alignment and structure
>d1j71a_ b.50.1.2 (A:) Acid protease {Yeast (Candida tropicalis) [TaxId: 5482]} Back     information, alignment and structure
>d1am5a_ b.50.1.2 (A:) Pepsin(ogen) {Atlantic cod (Gadus morhua) [TaxId: 8049]} Back     information, alignment and structure
>d1miqa_ b.50.1.2 (A:) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d1smra_ b.50.1.2 (A:) Chymosin (synonym: renin) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1eaga_ b.50.1.2 (A:) Acid protease {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
>d1hrna_ b.50.1.2 (A:) Chymosin (synonym: renin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1mppa_ b.50.1.2 (A:) Pepsin {Mucor pusillus [TaxId: 4840]} Back     information, alignment and structure
>d3cmsa_ b.50.1.2 (A:) Chymosin (synonym: renin) {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d2qp8a1 b.50.1.2 (A:60-446) beta-secretase (memapsin) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wkra_ b.50.1.2 (A:) Acid protease {Irpex lacteus (Polyporus tulipiferae), Polyporopepsin [TaxId: 5319]} Back     information, alignment and structure
>d1izea_ b.50.1.2 (A:) Acid protease {Fungus (Aspergillus oryzae) [TaxId: 5062]} Back     information, alignment and structure
>d2bjua1 b.50.1.2 (A:1-329) Plasmepsin (a hemoglobin-degrading enzyme) {Plasmodium falciparum, plasmepsin II [TaxId: 5833]} Back     information, alignment and structure
>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum aestivum) [TaxId: 4565]} Back     information, alignment and structure
>d1qdma2 b.50.1.2 (A:2-247,A:248-338) Plant acid proteinase, phytepsin {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
>d1bxoa_ b.50.1.2 (A:) Acid protease {Fungus (Penicillium janthinellum), penicillopepsin [TaxId: 5079]} Back     information, alignment and structure