Citrus Sinensis ID: 046776

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310----
MGSEAAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERNMMKAYCGI
ccccccccccEEEccccccccccHHHHHHHHHHHHHHHHccEEEEEcccccHHHHHHHHHHHHHHccccHHHHHHcccccccccccccccccccccEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHcccccccccccccccccccccccccccccccccEEEEEcccccEEEEcccccEEEEccccccEEEEHHHHHHHHHcccccccccEEEEcccccEEEEEEcccccccEEccccccccccccccccccHHHHHHHHHHccccccccHHHHHHcccc
ccccccccccEEEcccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEcccccccEEEEcccccccccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccccccEEEEEccccccccccccccccccccccEEEEEccccccEEEEEEcccEEEEcccccEEEEEEcccEEEEccccEccEEEEEEEEccccEEEEEEEccccccEcccHHHcccccccccccccHHHHHHHHHHcccccHHHHHHHHHHccc
mgseaaqklpivdlsqenlkpgsssWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELfdlpqetkmknvnpkpahgymgkisafplhegmgieyatnrgecekftslmwpqgnyqfCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRksqtdttnlafkghtdkSLVSILHSnhvkglelrtkdgewihfepspssfvIIAGDVCMAwsndrikscyhrviVDGPEVRYALGLFSFlsgviqtpeelvddehplqykpfdhagLLQFYlsnsdqnkgeRNMMKAYCGI
mgseaaqklpivdlsqenlkpgssSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQtdttnlafkghtdkslvSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLsnsdqnkgerNMMKAYCGI
MGSEAAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERNMMKAYCGI
*************************WQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDL**************HGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYL*******************
*****AQKLPIVDLSQENLK***SSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNV**K***GYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERNMMKAYCGI
MGSEAAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERNMMKAYCGI
******QKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERNMMKAYCGI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MGSEAAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERNMMKAYCGI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query314 2.2.26 [Sep-21-2011]
P93771372 Gibberellin 20 oxidase 1 no no 0.531 0.448 0.339 3e-19
Q39110377 Gibberellin 20 oxidase 1 no no 0.945 0.787 0.247 1e-18
Q39111378 Gibberellin 20 oxidase 2 no no 0.882 0.732 0.258 3e-18
Q9XFR9341 Gibberellin 2-beta-dioxyg no no 0.777 0.715 0.278 6e-18
O04707365 Gibberellin 20 oxidase 1- N/A no 0.531 0.457 0.321 7e-17
O04706365 Gibberellin 20 oxidase 1- N/A no 0.531 0.457 0.321 7e-17
O04705361 Gibberellin 20 oxidase 1- N/A no 0.531 0.462 0.321 9e-17
Q96330336 Flavonol synthase/flavano no no 0.850 0.794 0.267 2e-16
Q9SVS8349 Gibberellin 3-beta-dioxyg no no 0.786 0.707 0.271 5e-16
Q39112380 Gibberellin 20 oxidase 3 no no 0.614 0.507 0.287 7e-16
>sp|P93771|GAOX1_ORYSJ Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2 Back     alignment and function desciption
 Score = 96.3 bits (238), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 7/174 (4%)

Query: 126 EVAHTYANIVAELQQLVMKMLFESYGI----EKLYESQKESTTYLLRFLKYRKSQTDTTN 181
           EV   Y + ++ L   +M++L ES GI       +    +    ++R   Y   Q     
Sbjct: 169 EVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDT 228

Query: 182 LAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKS 241
           L    H D + ++ILH +HV GLE+   +G W    P P + V+  GD  MA SN R +S
Sbjct: 229 LGTGPHCDPTSLTILHQDHVGGLEV-WAEGRWRAIRPRPGALVVNVGDTFMALSNARYRS 287

Query: 242 CYHRVIVDGPEVRYALGLF--SFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQF 293
           C HR +V+    R +L  F    +  V++ PEELVDD HP  Y  F    LL F
Sbjct: 288 CLHRAVVNSTAPRRSLAFFLCPEMDTVVRPPEELVDDHHPRVYPDFTWRALLDF 341
Key oxidase enzyme in the biosynthesis of gibberellin that catalyzes the conversion of GA12 and GA53 to GA9 and GA20 respectively, via a three-step oxidation at C-20 of the GA skeleton.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 1EC: .EC: 1EC: 4EC: .EC: 1EC: 1EC: .EC: -
>sp|Q39110|GAOX1_ARATH Gibberellin 20 oxidase 1 OS=Arabidopsis thaliana GN=20ox1 PE=2 SV=2 Back     alignment and function description
>sp|Q39111|GAOX2_ARATH Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1 Back     alignment and function description
>sp|Q9XFR9|G2OX2_ARATH Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1 Back     alignment and function description
>sp|O04707|GAO1A_WHEAT Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1 Back     alignment and function description
>sp|O04706|GAO1B_WHEAT Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1 Back     alignment and function description
>sp|O04705|GAO1D_WHEAT Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1 Back     alignment and function description
>sp|Q96330|FLS1_ARATH Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1 Back     alignment and function description
>sp|Q9SVS8|G3OX3_ARATH Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1 Back     alignment and function description
>sp|Q39112|GAOX3_ARATH Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query314
255553009314 Gibberellin 20 oxidase, putative [Ricinu 0.996 0.996 0.695 1e-132
224054174311 2-oxoglutarate-dependent dioxygenase [Po 0.987 0.996 0.619 1e-110
297743339 461 unnamed protein product [Vitis vinifera] 0.993 0.676 0.552 1e-101
225442753313 PREDICTED: gibberellin 20 oxidase 3-like 0.993 0.996 0.552 1e-101
147800974317 hypothetical protein VITISV_030994 [Viti 0.993 0.984 0.544 1e-101
225442757317 PREDICTED: gibberellin 3-beta-dioxygenas 0.993 0.984 0.541 1e-100
224054172313 2-oxoglutarate-dependent dioxygenase [Po 0.993 0.996 0.568 1e-100
255553011313 Gibberellin 20 oxidase, putative [Ricinu 0.993 0.996 0.561 1e-100
15219097314 oxidoreductase, 2OG-Fe(II) oxygenase fam 0.971 0.971 0.538 3e-98
225442749311 PREDICTED: gibberellin 20 oxidase 1 [Vit 0.990 1.0 0.550 5e-98
>gi|255553009|ref|XP_002517547.1| Gibberellin 20 oxidase, putative [Ricinus communis] gi|223543179|gb|EEF44711.1| Gibberellin 20 oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  477 bits (1228), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 219/315 (69%), Positives = 264/315 (83%), Gaps = 2/315 (0%)

Query: 1   MGSEAAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFD 60
           MGSE   ++P+VDLS E+L PGSSSW++ACN+IR ALE+YGCF  +Y+    EF N+V  
Sbjct: 1   MGSETVGQIPLVDLSSEHLNPGSSSWRSACNDIRKALEQYGCFEVVYNNPSIEFHNRVLA 60

Query: 61  SLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQG 120
            LE+LF LPQE KMKNVNPKPAHGYMGK+S FP+HEGMGIEYA ++ EC+KFT+LMWP+G
Sbjct: 61  LLEKLFQLPQEIKMKNVNPKPAHGYMGKMSIFPIHEGMGIEYANDKDECQKFTNLMWPEG 120

Query: 121 NYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTT 180
           N  FC+  H+YA +V ELQQL++KMLFESYGIEK  ES  +STTYLLR LKYR+SQ + T
Sbjct: 121 NDHFCDTVHSYAKMVTELQQLLVKMLFESYGIEKHSESHIKSTTYLLRLLKYRRSQAE-T 179

Query: 181 NLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSP-SSFVIIAGDVCMAWSNDRI 239
           NL FKGHTDKS +SILH NHVKGLE+R KDG W+ +EPS  +SFV++AGDV MAWSNDRI
Sbjct: 180 NLGFKGHTDKSFLSILHQNHVKGLEIRMKDGNWVSYEPSSHTSFVVVAGDVGMAWSNDRI 239

Query: 240 KSCYHRVIVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSD 299
           KSCYHRV VDG EVRYALGLFSFL+G+++ PEEL+D+EHPLQYKPF+H GLL FY SN+ 
Sbjct: 240 KSCYHRVTVDGEEVRYALGLFSFLTGLVKVPEELIDEEHPLQYKPFEHQGLLDFYQSNNS 299

Query: 300 QNKGERNMMKAYCGI 314
           QNKG+ NM+KAYCG+
Sbjct: 300 QNKGDSNMVKAYCGV 314

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224054174|ref|XP_002298128.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222845386|gb|EEE82933.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297743339|emb|CBI36206.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442753|ref|XP_002284983.1| PREDICTED: gibberellin 20 oxidase 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147800974|emb|CAN77851.1| hypothetical protein VITISV_030994 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225442757|ref|XP_002280670.1| PREDICTED: gibberellin 3-beta-dioxygenase 3 [Vitis vinifera] gi|297743341|emb|CBI36208.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224054172|ref|XP_002298127.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] gi|222845385|gb|EEE82932.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255553011|ref|XP_002517548.1| Gibberellin 20 oxidase, putative [Ricinus communis] gi|223543180|gb|EEF44712.1| Gibberellin 20 oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|15219097|ref|NP_175689.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] gi|12324655|gb|AAG52291.1|AC019018_28 putative oxidoreductase; 33116-34434 [Arabidopsis thaliana] gi|67633452|gb|AAY78650.1| oxidoreductase [Arabidopsis thaliana] gi|332194732|gb|AEE32853.1| oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225442749|ref|XP_002284974.1| PREDICTED: gibberellin 20 oxidase 1 [Vitis vinifera] gi|297743336|emb|CBI36203.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query314
TAIR|locus:2011581314 AT1G52800 [Arabidopsis thalian 0.971 0.971 0.538 9e-93
TAIR|locus:2034255320 AT1G80320 [Arabidopsis thalian 1.0 0.981 0.481 3.6e-82
TAIR|locus:2011576310 AT1G52790 [Arabidopsis thalian 0.968 0.980 0.516 9.4e-82
TAIR|locus:2196618320 AT1G15540 [Arabidopsis thalian 1.0 0.981 0.485 5.2e-81
TAIR|locus:2011506317 AT1G52820 [Arabidopsis thalian 0.990 0.981 0.434 9.6e-73
TAIR|locus:2139389322 AOP1 [Arabidopsis thaliana (ta 0.901 0.878 0.422 2.4e-60
TAIR|locus:2011586289 AT1G52810 [Arabidopsis thalian 0.528 0.574 0.409 2e-51
TAIR|locus:2010474322 AT1G28030 [Arabidopsis thalian 0.984 0.959 0.382 1.7e-50
TAIR|locus:2139370361 AOP3 [Arabidopsis thaliana (ta 0.442 0.385 0.393 2e-47
TAIR|locus:2085879349 AT3G19010 [Arabidopsis thalian 0.926 0.833 0.292 3.8e-23
TAIR|locus:2011581 AT1G52800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 924 (330.3 bits), Expect = 9.0e-93, P = 9.0e-93
 Identities = 166/308 (53%), Positives = 224/308 (72%)

Query:     8 KLPIVDL-SQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELF 66
             K+PI+DL SQ+ LKP +S+W++   E   ALEEYGCF+A+YD    +  + +F + EELF
Sbjct:     9 KVPILDLTSQQELKPNTSTWRSVSREACEALEEYGCFLAVYDGVTQQLDDSIFAAAEELF 68

Query:    67 DLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCE 126
             DLP ETK KNVN KP HGY+G++   PLHEG+G++Y TN+   ++FT LMWPQGN +FC 
Sbjct:    69 DLPTETKKKNVNEKPYHGYVGQMPVIPLHEGLGVDYVTNKEIAQRFTHLMWPQGNDRFCN 128

Query:   127 VAHTYANIVAELQQLVMKMLFESYGIEKLYESQKESTTYLLRFLKYRKSQTDTTNLAFKG 186
               HT++N VAEL +LV++M+FE+YG+EK YES   S TYLL+FLKY       +  AF  
Sbjct:   129 TVHTFSNAVAELDRLVVRMIFENYGVEKHYESHVGSKTYLLKFLKYLAPPESISMPAFPQ 188

Query:   187 HTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKSCYHRV 246
             HTDK+ +SILH N V GLE+++KDGEWI  +  P S+V++AGD+ M WSNDRI+SC HRV
Sbjct:   189 HTDKTFLSILHQNDVNGLEVKSKDGEWISLQLPPKSYVVMAGDISMGWSNDRIRSCEHRV 248

Query:   247 IVDGPEVRYALGLFSFLSGVIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERN 306
              ++G + RY LGLFSFL+ ++  PEELVDD+HPL YKPFD+  L+ FY +   + +   +
Sbjct:   249 TMEGDKTRYTLGLFSFLTDLVSIPEELVDDKHPLMYKPFDNIALINFYTTK--EGREANS 306

Query:   307 MMKAYCGI 314
              +KAYCGI
Sbjct:   307 TLKAYCGI 314
GO:0005737 "cytoplasm" evidence=ISM
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
TAIR|locus:2034255 AT1G80320 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011576 AT1G52790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196618 AT1G15540 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011506 AT1G52820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139389 AOP1 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2011586 AT1G52810 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2010474 AT1G28030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2139370 AOP3 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2085879 AT3G19010 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.14.11LOW CONFIDENCE prediction!
4th Layer1.14.11.7LOW CONFIDENCE prediction!
4th Layer1.14.11.4LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
PLN02365300 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxy 1e-30
COG3491322 COG3491, PcbC, Isopenicillin N synthase and relate 2e-24
PLN02750345 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxy 4e-23
PLN02947374 PLN02947, PLN02947, oxidoreductase 6e-23
PLN02254358 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase 9e-23
PLN02276361 PLN02276, PLN02276, gibberellin 20-oxidase 3e-21
PLN02639337 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxy 2e-20
PLN02156335 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase 3e-19
pfam0317196 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase supe 1e-18
PLN03178360 PLN03178, PLN03178, leucoanthocyanidin dioxygenase 2e-17
PLN02758361 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy 6e-17
PLN02393362 PLN02393, PLN02393, leucoanthocyanidin dioxygenase 2e-15
PLN02912348 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxy 5e-15
PLN02997325 PLN02997, PLN02997, flavonol synthase 2e-13
PLN02704335 PLN02704, PLN02704, flavonol synthase 2e-13
PLN02984341 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxy 5e-13
PLN02485329 PLN02485, PLN02485, oxidoreductase 3e-12
PTZ00273320 PTZ00273, PTZ00273, oxidase reductase; Provisional 4e-12
pfam14226113 pfam14226, DIOX_N, non-haem dioxygenase in morphin 2e-11
PLN02904357 PLN02904, PLN02904, oxidoreductase 3e-11
PLN00417348 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxy 2e-10
PLN03001262 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxy 8e-09
PLN02216357 PLN02216, PLN02216, protein SRG1 3e-08
PLN03002332 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxy 8e-08
PLN02403303 PLN02403, PLN02403, aminocyclopropanecarboxylate o 9e-07
PLN02515358 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-di 1e-06
PLN02299321 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxyl 9e-05
>gnl|CDD|177993 PLN02365, PLN02365, 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information 
 Score =  116 bits (293), Expect = 1e-30
 Identities = 84/307 (27%), Positives = 132/307 (42%), Gaps = 31/307 (10%)

Query: 5   AAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEE 64
           A   +P +DL      PG         ++R A E +GCF  +          ++   +  
Sbjct: 2   AEVNIPTIDLE---EFPGQIE------KLREACERWGCFRVVNHGVSLSLMAEMKKVVRS 52

Query: 65  LFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQF 124
           LFDLP E K +N +     GYM      PL+E +G+    +    + F S +    + + 
Sbjct: 53  LFDLPDEVKRRNTDVILGSGYMAPSEVNPLYEALGLYDMASPQAVDTFCSQLDASPHQR- 111

Query: 125 CEVAHTYANIVAELQQLVMKMLFESYGIE-----KLYESQKESTTYLLRFLKYRKSQTDT 179
            E    YA  + +L   + + L ES G+      + + SQ        R  KY  +    
Sbjct: 112 -ETIKKYAKAIHDLAMDLARKLAESLGLVEGDFFQGWPSQ-------FRINKYNFTPETV 163

Query: 180 TNLAFKGHTDKSLVSILHSNH-VKGLE-LRTKDGEWIHFEPSPSSFVIIAGDVCMAWSND 237
            +   + HTD   ++IL  +  V GLE +    GE++  +P P + ++  GDV  AWSN 
Sbjct: 164 GSSGVQIHTDSGFLTILQDDENVGGLEVMDPSSGEFVPVDPLPGTLLVNLGDVATAWSNG 223

Query: 238 RIKSCYHRVIVDGPEVRYALGLFSFLSG----VIQTPEELVDDEHPLQYKPFDHAGLLQF 293
           R+ +  HRV      +R ++   SFL G     ++ P E VD EHP  YKPF +    + 
Sbjct: 224 RLCNVKHRVQCKEATMRISIA--SFLLGPKDDDVEAPPEFVDAEHPRLYKPFTYEDYRKL 281

Query: 294 YLSNSDQ 300
            LS    
Sbjct: 282 RLSTKLH 288

Length = 300
>gnl|CDD|226022 COG3491, PcbC, Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>gnl|CDD|178351 PLN02750, PLN02750, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase Back     alignment and domain information
>gnl|CDD|215142 PLN02254, PLN02254, gibberellin 3-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|215156 PLN02276, PLN02276, gibberellin 20-oxidase Back     alignment and domain information
>gnl|CDD|178245 PLN02639, PLN02639, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|177816 PLN02156, PLN02156, gibberellin 2-beta-dioxygenase Back     alignment and domain information
>gnl|CDD|217403 pfam03171, 2OG-FeII_Oxy, 2OG-Fe(II) oxygenase superfamily Back     alignment and domain information
>gnl|CDD|215614 PLN03178, PLN03178, leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>gnl|CDD|178500 PLN02912, PLN02912, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178576 PLN02997, PLN02997, flavonol synthase Back     alignment and domain information
>gnl|CDD|166345 PLN02704, PLN02704, flavonol synthase Back     alignment and domain information
>gnl|CDD|215534 PLN02984, PLN02984, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215267 PLN02485, PLN02485, oxidoreductase Back     alignment and domain information
>gnl|CDD|140299 PTZ00273, PTZ00273, oxidase reductase; Provisional Back     alignment and domain information
>gnl|CDD|222608 pfam14226, DIOX_N, non-haem dioxygenase in morphine synthesis N-terminal Back     alignment and domain information
>gnl|CDD|178492 PLN02904, PLN02904, oxidoreductase Back     alignment and domain information
>gnl|CDD|177810 PLN00417, PLN00417, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|166642 PLN03001, PLN03001, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1 Back     alignment and domain information
>gnl|CDD|178579 PLN03002, PLN03002, oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>gnl|CDD|178025 PLN02403, PLN02403, aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>gnl|CDD|178130 PLN02515, PLN02515, naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>gnl|CDD|215168 PLN02299, PLN02299, 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 314
PLN02276361 gibberellin 20-oxidase 100.0
PLN02216357 protein SRG1 100.0
PLN02758361 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02254358 gibberellin 3-beta-dioxygenase 100.0
PTZ00273320 oxidase reductase; Provisional 100.0
PLN03178360 leucoanthocyanidin dioxygenase; Provisional 100.0
PLN02485329 oxidoreductase 100.0
PLN02750345 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02912348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03002332 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02997325 flavonol synthase 100.0
PLN02947374 oxidoreductase 100.0
PLN02904357 oxidoreductase 100.0
PLN02393362 leucoanthocyanidin dioxygenase like protein 100.0
PLN02299321 1-aminocyclopropane-1-carboxylate oxidase 100.0
PLN02515358 naringenin,2-oxoglutarate 3-dioxygenase 100.0
PLN02639337 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02365300 2-oxoglutarate-dependent dioxygenase 100.0
PLN02156335 gibberellin 2-beta-dioxygenase 100.0
PLN00417348 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN02704335 flavonol synthase 100.0
COG3491322 PcbC Isopenicillin N synthase and related dioxygen 100.0
KOG0143322 consensus Iron/ascorbate family oxidoreductases [S 100.0
PLN02403303 aminocyclopropanecarboxylate oxidase 100.0
PLN02984341 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PLN03001262 oxidoreductase, 2OG-Fe(II) oxygenase family protei 100.0
PF0317198 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Ent 99.92
PF14226116 DIOX_N: non-haem dioxygenase in morphine synthesis 99.9
PLN03176120 flavanone-3-hydroxylase; Provisional 99.79
PF13640100 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; 97.02
PRK05467226 Fe(II)-dependent oxygenase superfamily protein; Pr 95.75
smart00702178 P4Hc Prolyl 4-hydroxylase alpha subunit homologues 94.61
PF12851171 Tet_JBP: Oxygenase domain of the 2OGFeDO superfami 91.16
TIGR02466201 conserved hypothetical protein. This family consis 85.96
PF13532194 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; 85.47
PF13759101 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB 84.51
>PLN02276 gibberellin 20-oxidase Back     alignment and domain information 
Probab=100.00  E-value=8.9e-78  Score=564.32  Aligned_cols=304  Identities=25%  Similarity=0.400  Sum_probs=270.6

Q ss_pred             CCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHccccCC-CCCCcc
Q 046776            7 QKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNP-KPAHGY   85 (314)
Q Consensus         7 ~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy   85 (314)
                      .+||+|||+.+ +.+++.+++.++++|.+||+++|||||+|||||.++++++++++++||+||.|+|+++... ...+||
T Consensus        39 ~~iPvIDls~~-~~~~~~~~~~~~~~l~~Ac~~~GFF~l~nHGI~~~l~~~~~~~~~~FF~LP~eeK~k~~~~~~~~~GY  117 (361)
T PLN02276         39 LAVPLIDLGGF-LSGDEAATAEAARLVREACLKHGFFQVVNHGVDAALIRAAHEYMDAFFKLPLSEKQRAQRKPGESCGY  117 (361)
T ss_pred             CCCCeEEChhh-cCCChHHHHHHHHHHHHHHHHCcEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHHhhccCCCCcccc
Confidence            57999999986 3333445778999999999999999999999999999999999999999999999998654 357899


Q ss_pred             ccCCC-----CCCceeeeecccCCCc---cccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-hhH
Q 046776           86 MGKIS-----AFPLHEGMGIEYATNR---GECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIE-KLY  156 (314)
Q Consensus        86 ~~~~~-----~~d~~E~~~~~~~~~~---~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~  156 (314)
                      .+...     ..|++|.|.++.....   .....+.+|.||...++||+.+++|++.|.+|+..||++||++||++ ++|
T Consensus       118 ~~~~~~~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f  197 (361)
T PLN02276        118 ASSHTGRFSSKLPWKETLSFGYHADGGSSPVVVDYFKSVLGEDFEQFGKVYQEYCEAMKTLSLKIMELLGISLGVDRGYY  197 (361)
T ss_pred             CccCccccCCCCCeeeeEEEeccCcccccccchhcccccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
Confidence            87543     2489999998743211   11123345789987889999999999999999999999999999999 899


Q ss_pred             HhhhcCcccceeeccccCCCCCCCCcccccccCCCCceEEecCCCCCcceecCCCceEEcCCCCCcEEEEhhhHHHHHhC
Q 046776          157 ESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSN  236 (314)
Q Consensus       157 ~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~~Tn  236 (314)
                      ++++..+.+.+|++|||+++.++..+|+++|||+|+||||+||+++||||+ ++|+|++|+|+||++|||+||+||+|||
T Consensus       198 ~~~~~~~~~~lrl~~YP~~~~~~~~~g~~~HTD~g~lTlL~Qd~v~GLQV~-~~g~Wi~V~p~pgalVVNiGD~L~~~TN  276 (361)
T PLN02276        198 RKFFEDGDSIMRCNYYPPCQEPELTLGTGPHCDPTSLTILHQDQVGGLQVF-VDNKWRSVRPRPGALVVNIGDTFMALSN  276 (361)
T ss_pred             HHHhcCccceeeeEeCCCCCCcccccCCccccCCceeEEEEecCCCceEEE-ECCEEEEcCCCCCeEEEEcHHHHHHHhC
Confidence            988888888999999999988888899999999999999999999999997 7899999999999999999999999999


Q ss_pred             CcccCccceEecCCCCceEEEEeccCCCc--ceecCcccCCCCCCCCCCCcCHHHHHHHHhhcccCCccccchhhccc
Q 046776          237 DRIKSCYHRVIVDGPEVRYALGLFSFLSG--VIQTPEELVDDEHPLQYKPFDHAGLLQFYLSNSDQNKGERNMMKAYC  312 (314)
Q Consensus       237 G~~ks~~HRVv~~~~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~~~t~~e~~~~~~~~~~~~k~~~~~~~~~~  312 (314)
                      |+||||+|||++++..+||||+||++|+.  +|.|+++|+++++|++|+++||+||++.+.++...+++.++.+++|.
T Consensus       277 G~~kSt~HRVv~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~~~~~~~  354 (361)
T PLN02276        277 GRYKSCLHRAVVNSERERRSLAFFLCPKEDKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKHYRADMNTLQAFSNWL  354 (361)
T ss_pred             CccccccceeecCCCCCEEEEEEEecCCCCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhcccchhHHHHHHHHH
Confidence            99999999999988889999999999998  99999999999999999999999999999988777788888887764

>PLN02216 protein SRG1 Back     alignment and domain information
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02254 gibberellin 3-beta-dioxygenase Back     alignment and domain information
>PTZ00273 oxidase reductase; Provisional Back     alignment and domain information
>PLN03178 leucoanthocyanidin dioxygenase; Provisional Back     alignment and domain information
>PLN02485 oxidoreductase Back     alignment and domain information
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02997 flavonol synthase Back     alignment and domain information
>PLN02947 oxidoreductase Back     alignment and domain information
>PLN02904 oxidoreductase Back     alignment and domain information
>PLN02393 leucoanthocyanidin dioxygenase like protein Back     alignment and domain information
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase Back     alignment and domain information
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase Back     alignment and domain information
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02365 2-oxoglutarate-dependent dioxygenase Back     alignment and domain information
>PLN02156 gibberellin 2-beta-dioxygenase Back     alignment and domain information
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN02704 flavonol synthase Back     alignment and domain information
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only] Back     alignment and domain information
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] Back     alignment and domain information
>PLN02403 aminocyclopropanecarboxylate oxidase Back     alignment and domain information
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein Back     alignment and domain information
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit Back     alignment and domain information
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A Back     alignment and domain information
>PLN03176 flavanone-3-hydroxylase; Provisional Back     alignment and domain information
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A Back     alignment and domain information
>PRK05467 Fe(II)-dependent oxygenase superfamily protein; Provisional Back     alignment and domain information
>smart00702 P4Hc Prolyl 4-hydroxylase alpha subunit homologues Back     alignment and domain information
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro [] Back     alignment and domain information
>TIGR02466 conserved hypothetical protein Back     alignment and domain information
>PF13532 2OG-FeII_Oxy_2: 2OG-Fe(II) oxygenase superfamily; PDB: 2IUW_A 3BTZ_A 3RZL_A 3RZH_A 3S5A_A 3RZG_A 3RZJ_A 3BUC_A 3H8X_A 3H8R_A Back     alignment and domain information
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
2brt_A355 Anthocyanidin Synthase From Arabidopsis Thaliana Co 5e-11
1gp5_A356 Anthocyanidin Synthase From Arabidopsis Thaliana Co 6e-11
3oox_A312 Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenas 9e-11
1gp4_A356 Anthocyanidin Synthase From Arabidopsis Thaliana (S 9e-10
1w9y_A319 The Structure Of Acc Oxidase Length = 319 2e-08
3on7_A280 Crystal Structure Of A Putative Oxygenase (So_2589) 9e-06
1ips_A331 Isopenicillin N Synthase From Aspergillus Nidulans 4e-04
2bjs_A325 Isopenicillin N Synthase C-Terminal Truncation Muta 5e-04
>pdb|2BRT|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Naringenin Length = 355 Back     alignment and structure 
Iteration: 1

 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 135/320 (42%), Gaps = 37/320 (11%)
Query: 4   EAAQKLPIVDLSQENLKPGSSSWQTAC-NEIRLALEEYGCFVALYDKHLP-EFRNKVFDS 61
           E   ++P +DL  +N++      +  C  E++ A  ++G  + L +  +P +   +V  +
Sbjct: 41  EDGPQVPTIDL--KNIESDDEKIRENCIEELKKASLDWGV-MHLINHGIPADLMERVKKA 97
Query: 62  LEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEGMGIEYATN-RGECE---------- 110
            EE F L  E K K  N +      GKI      +G G + A N  G+ E          
Sbjct: 98  GEEFFSLSVEEKEKYANDQAT----GKI------QGYGSKLANNASGQLEWEDYFFHLAY 147
Query: 111 ---KFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIE-KLYESQKESTTYL 166
              K    +WP+    + E    YA  +  L   V K L    G+E    E +      L
Sbjct: 148 PEEKRDLSIWPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEEL 207
Query: 167 LRFLK---YRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSF 223
           L  +K   Y K       L  + HTD S ++ +  N V GL+L   +G+W+  +  P S 
Sbjct: 208 LLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFY-EGKWVTAKCVPDSI 266
Query: 224 VIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLFSFLSG---VIQTPEELVDDEHPL 280
           V+  GD     SN + KS  HR +V+  +VR +  +F        V++   E+V  E P 
Sbjct: 267 VMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPA 326
Query: 281 QYKPFDHAGLLQFYLSNSDQ 300
           ++ P   A  ++  L   +Q
Sbjct: 327 KFPPRTFAQHIEHKLFGKEQ 346
>pdb|1GP5|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana Complexed With Trans-Dihydroquercetin Length = 356 Back     alignment and structure
>pdb|3OOX|A Chain A, Crystal Structure Of A Putative 2og-Fe(Ii) Oxygenase Family Protein (Cc_0200) From Caulobacter Crescentus At 1.44 A Resolution Length = 312 Back     alignment and structure
>pdb|1GP4|A Chain A, Anthocyanidin Synthase From Arabidopsis Thaliana (Selenomethionine Substituted) Length = 356 Back     alignment and structure
>pdb|1W9Y|A Chain A, The Structure Of Acc Oxidase Length = 319 Back     alignment and structure
>pdb|3ON7|A Chain A, Crystal Structure Of A Putative Oxygenase (So_2589) From Shewanella Oneidensis At 2.20 A Resolution Length = 280 Back     alignment and structure
>pdb|1IPS|A Chain A, Isopenicillin N Synthase From Aspergillus Nidulans (Manganese Complex) Length = 331 Back     alignment and structure
>pdb|2BJS|A Chain A, Isopenicillin N Synthase C-Terminal Truncation Mutant Length = 325 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query314
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 1e-41
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 2e-38
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 6e-35
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 1e-34
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 2e-32
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 3e-27
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356 Back     alignment and structure
 Score =  147 bits (372), Expect = 1e-41
 Identities = 71/329 (21%), Positives = 118/329 (35%), Gaps = 39/329 (11%)

Query: 3   SEAAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHL------PEFRN 56
            E   ++P +DL            +    E++ A  ++G        HL       +   
Sbjct: 41  KEDGPQVPTIDLKNIE-SDDEKIRENCIEELKKASLDWGVM------HLINHGIPADLME 93

Query: 57  KVFDSLEELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEG--------MGIEYATNRGE 108
           +V  + EE F L  E K K  N +      G  S    +                     
Sbjct: 94  RVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKR 153

Query: 109 CEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQ----KESTT 164
                   WP+    + E    YA  +  L   V K L    G+E     +     E   
Sbjct: 154 DLSI----WPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELL 209

Query: 165 YLLRFLKYRK-SQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSF 223
             ++   Y K  Q +   L  + HTD S ++ +  N V GL+L   +G+W+  +  P S 
Sbjct: 210 LQMKINYYPKCPQPELA-LGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSI 267

Query: 224 VIIAGDVCMAWSNDRIKSCYHRVIVDGPEVRYALGLF---SFLSGVIQTPEELVDDEHPL 280
           V+  GD     SN + KS  HR +V+  +VR +  +F        V++   E+V  E P 
Sbjct: 268 VMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPA 327

Query: 281 QYKPFDHAGLLQFYLSNSDQNKGERNMMK 309
           ++ P   A  ++  L      K +  ++ 
Sbjct: 328 KFPPRTFAQHIEHKL----FGKEQEELVS 352
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319 Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Length = 280 Back     alignment and structure
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Length = 312 Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Length = 331 Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Length = 311 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query314
3oox_A312 Putative 2OG-Fe(II) oxygenase family protein; stru 100.0
1gp6_A356 Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep 100.0
1w9y_A319 1-aminocyclopropane-1-carboxylate oxidase 1; oxyge 100.0
1odm_A331 Isopenicillin N synthase; antibiotic biosynthesis, 100.0
1dcs_A311 Deacetoxycephalosporin C synthase; ferrous oxygena 100.0
3on7_A280 Oxidoreductase, iron/ascorbate family; structural 100.0
3dkq_A243 PKHD-type hydroxylase SBAL_3634; putative oxygenas 94.85
2hbt_A247 EGL nine homolog 1; prolyl hydroxylase, hypoxia in 93.32
2rg4_A216 Uncharacterized protein; rhodobacterales, oceanico 93.14
2jig_A224 Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A { 83.75
3itq_A216 Prolyl 4-hydroxylase, alpha subunit domain protei; 82.36
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15} Back     alignment and structure
Probab=100.00  E-value=5e-79  Score=563.11  Aligned_cols=289  Identities=22%  Similarity=0.311  Sum_probs=258.1

Q ss_pred             CCCCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHccccCC-CCCCc
Q 046776            6 AQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNP-KPAHG   84 (314)
Q Consensus         6 ~~~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~G   84 (314)
                      +.+||||||+.+  .   .++++++++|.+||+++|||||+|||||.++++++++++++||+||.|+|+++... ..++|
T Consensus         4 ~~~iPvIDls~~--~---~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~~~~~G   78 (312)
T 3oox_A            4 TSAIDPVSFSLY--A---KDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVKGGARG   78 (312)
T ss_dssp             CCSSCCEETHHH--H---HCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSGGGTSE
T ss_pred             CCCCCeEEChHh--c---ccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCCCCccc
Confidence            678999999985  2   24678999999999999999999999999999999999999999999999999874 46789


Q ss_pred             cccCCC-------CCCceeeeecccCCC--ccccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-h
Q 046776           85 YMGKIS-------AFPLHEGMGIEYATN--RGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIE-K  154 (314)
Q Consensus        85 y~~~~~-------~~d~~E~~~~~~~~~--~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~  154 (314)
                      |.+.+.       ..|++|.|.++....  ......+.+|.||+.+|+||+.+++|+++|.+|+..||++|+++||++ +
T Consensus        79 y~~~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~  158 (312)
T 3oox_A           79 YIPFGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERD  158 (312)
T ss_dssp             EECCCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTT
T ss_pred             cccccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHH
Confidence            986553       258999999875322  112233457899999999999999999999999999999999999999 8


Q ss_pred             hHHhhhcCcccceeeccccCCCCCCCCcccccccCCCCceEEecCCCCCcceecCCCceEEcCCCCCcEEEEhhhHHHHH
Q 046776          155 LYESQKESTTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAW  234 (314)
Q Consensus       155 ~~~~~~~~~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~~  234 (314)
                      +|.+.+..+.+.+|++||||++.++..+|+++|||+|+||||+||+++||||++++|+|++|+|+||++||||||+||+|
T Consensus       159 ~f~~~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~  238 (312)
T 3oox_A          159 FFKPTVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERL  238 (312)
T ss_dssp             TTHHHHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHH
T ss_pred             HHHHHhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHH
Confidence            99998888888999999999987555599999999999999999999999999999999999999999999999999999


Q ss_pred             hCCcccCccceEecCC----CCceEEEEeccCCCc--ceecCcccCCCCCCCCCC-CcCHHHHHHHHhhccc
Q 046776          235 SNDRIKSCYHRVIVDG----PEVRYALGLFSFLSG--VIQTPEELVDDEHPLQYK-PFDHAGLLQFYLSNSD  299 (314)
Q Consensus       235 TnG~~ks~~HRVv~~~----~~~R~Si~~F~~P~~--~i~p~~~~~~~~~p~~y~-~~t~~e~~~~~~~~~~  299 (314)
                      |||+||||+|||++++    ..+|||++||++|+.  +|.|+++|+++++|++|+ ++|++||+..|+++.+
T Consensus       239 TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~~  310 (312)
T 3oox_A          239 TNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREIK  310 (312)
T ss_dssp             TTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHHC
T ss_pred             hCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHhc
Confidence            9999999999998764    467999999999998  999999999999999999 9999999999998654
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Back     alignment and structure
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Back     alignment and structure
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ... Back     alignment and structure
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A* Back     alignment and structure
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis} Back     alignment and structure
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155} Back     alignment and structure
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A* Back     alignment and structure
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A Back     alignment and structure
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A Back     alignment and structure
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 314
d1gp6a_349 b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr 1e-38
d1w9ya1307 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxyla 2e-37
d1dcsa_311 b.82.2.1 (A:) Deacetoxycephalosporin C synthase {S 3e-24
d1odma_329 b.82.2.1 (A:) Isopenicillin N synthase {Emericella 5e-16
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349 Back     information, alignment and structure

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  137 bits (345), Expect = 1e-38
 Identities = 71/309 (22%), Positives = 121/309 (39%), Gaps = 13/309 (4%)

Query: 3   SEAAQKLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSL 62
            E   ++P +DL            +    E++ A  ++G    +      +   +V  + 
Sbjct: 40  KEDGPQVPTIDLK-NIESDDEKIRENCIEELKKASLDWGVMHLINHGIPADLMERVKKAG 98

Query: 63  EELFDLPQETKMKNVNPKPAHGYMGKISAFPLHEG---MGIEYATNRGECEKFTSL-MWP 118
           EE F L  E K K  N +      G  S    +        +Y  +    E+   L +WP
Sbjct: 99  EEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWP 158

Query: 119 QGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIEKLYESQK----ESTTYLLRFLKYRK 174
           +    + E    YA  +  L   V K L    G+E     ++    E     ++   Y K
Sbjct: 159 KTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPK 218

Query: 175 SQTDTTNLAFKGHTDKSLVSILHSNHVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAW 234
                  L  + HTD S ++ +  N V GL+L   +G+W+  +  P S V+  GD     
Sbjct: 219 CPQPELALGVEAHTDVSALTFILHNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEIL 277

Query: 235 SNDRIKSCYHRVIVDGPEVRYALGLFSFLSG---VIQTPEELVDDEHPLQYKPFDHAGLL 291
           SN + KS  HR +V+  +VR +  +F        V++   E+V  E P ++ P   A  +
Sbjct: 278 SNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSVESPAKFPPRTFAQHI 337

Query: 292 QFYLSNSDQ 300
           +  L   +Q
Sbjct: 338 EHKLFGKEQ 346
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Length = 307 Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Length = 311 Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query314
d1w9ya1307 1-aminocyclopropane-1-carboxylate oxidase 1 {Petun 100.0
d1gp6a_349 Anthocyanidin synthase {Mouse-ear cress (Arabidops 100.0
d1odma_329 Isopenicillin N synthase {Emericella nidulans [Tax 100.0
d1dcsa_311 Deacetoxycephalosporin C synthase {Streptomyces cl 100.0
d2iuwa1210 AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606] 89.37
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]} Back     information, alignment and structure
class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=100.00  E-value=8.8e-75  Score=531.98  Aligned_cols=292  Identities=22%  Similarity=0.318  Sum_probs=256.2

Q ss_pred             CCceEECCCCCCCCCChhHHHHHHHHHHHHhhccEEEEEcCCCChHHHHHHHHHHHHhcCCCHHHHccccCC-CCCCccc
Q 046776            8 KLPIVDLSQENLKPGSSSWQTACNEIRLALEEYGCFVALYDKHLPEFRNKVFDSLEELFDLPQETKMKNVNP-KPAHGYM   86 (314)
Q Consensus         8 ~iPvIDls~l~l~~~~~~~~~~~~~l~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~-~~~~Gy~   86 (314)
                      +||||||+.+  +  ..+|++++++|++||+++|||||+|||||.++++++++++++||++|.|+|+++... ..++||.
T Consensus         2 ~lPvIDl~~~--~--~~~r~~~~~~l~~A~~~~GFF~l~nHGI~~~li~~~~~~~~~fF~lp~e~K~k~~~~~~~~~g~~   77 (307)
T d1w9ya1           2 NFPIISLDKV--N--GVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQ   77 (307)
T ss_dssp             CCCEEEGGGG--G--STTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCeEECccc--C--CcCHHHHHHHHHHHHHcCeEEEEEcCCCCHHHHHHHHHHHHHHHhCcHHHhhhhhcCCCCCcCcc
Confidence            6999999985  2  335778999999999999999999999999999999999999999999999997543 3567887


Q ss_pred             cCCCCCCceeeeecccCCCccccccccCCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-hhHHhhh---cC
Q 046776           87 GKISAFPLHEGMGIEYATNRGECEKFTSLMWPQGNYQFCEVAHTYANIVAELQQLVMKMLFESYGIE-KLYESQK---ES  162 (314)
Q Consensus        87 ~~~~~~d~~E~~~~~~~~~~~~~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~-~~~~~~~---~~  162 (314)
                      +.....|++|.|.+.....      ...+.||+.+++||+.+++|++.|.+|+.+|+++|+++||++ ++|.+.+   ..
T Consensus        78 ~~~~~~d~~e~~~~~~~~~------~~~~~~~~~~~~fr~~~~~y~~~~~~la~~ll~~la~~Lgl~~~~f~~~~~~~~~  151 (307)
T d1w9ya1          78 AEVTDMDWESTFFLKHLPI------SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG  151 (307)
T ss_dssp             CCGGGCCCCEEEEEEEESC------CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred             ccccccChhhhcccccccc------cCcccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHhhhhcccc
Confidence            7666678999998864322      123579999999999999999999999999999999999999 8887765   34


Q ss_pred             cccceeeccccCCCCCCCCcccccccCCCCceEEecC-CCCCcceecCCCceEEcCCCCCcEEEEhhhHHHHHhCCcccC
Q 046776          163 TTYLLRFLKYRKSQTDTTNLAFKGHTDKSLVSILHSN-HVKGLELRTKDGEWIHFEPSPSSFVIIAGDVCMAWSNDRIKS  241 (314)
Q Consensus       163 ~~~~lr~~~Yp~~~~~~~~~~~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVnvGD~l~~~TnG~~ks  241 (314)
                      +.+.+|++||||++.++...|+++|||+|+||||+|+ .++|||| .++|+|++|+|.||++|||+||+||+||||+|||
T Consensus       152 ~~~~lr~~~YP~~~~~~~~~g~~~HtD~~~lTlL~q~~~~ggl~~-~~~g~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kS  230 (307)
T d1w9ya1         152 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQL-LKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKS  230 (307)
T ss_dssp             CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEE-EETTEEEECCCCTTCEEEEECHHHHHHTTTSSCC
T ss_pred             ccccceecCCCCCcccccccccccccccceeEEeeccCCCCeEEE-ecCCcEEEeccCCCeEEEEcchhhHHhhCCcccC
Confidence            5678999999999988888899999999999999996 4799999 4799999999999999999999999999999999


Q ss_pred             ccceEecCCCCceEEEEeccCCCc--ceecCcccCC---CCCCCCCCCcCHHHHHHHHhhcccCCccc-cchhhc
Q 046776          242 CYHRVIVDGPEVRYALGLFSFLSG--VIQTPEELVD---DEHPLQYKPFDHAGLLQFYLSNSDQNKGE-RNMMKA  310 (314)
Q Consensus       242 ~~HRVv~~~~~~R~Si~~F~~P~~--~i~p~~~~~~---~~~p~~y~~~t~~e~~~~~~~~~~~~k~~-~~~~~~  310 (314)
                      |+|||+.+++.+||||+||++|+.  +|.|+++|++   +++|++|+|||++||++.++++.+++|++ ++++|.
T Consensus       231 t~HRVv~~~~~~R~Si~~F~~p~~d~~i~p~~~~v~~~~~~~p~~y~~~t~~ey~~~~~~~~~~~~~~~~~~~~~  305 (307)
T d1w9ya1         231 VMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA  305 (307)
T ss_dssp             CCEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHHH
T ss_pred             cCceeecCCCCCcEEEEEEeeCCCCCEEeCCHHHhcccCccCCCCCCCeeHHHHHHHHHhccCCcccHHHHHhhc
Confidence            999999998889999999999998  9999999996   46899999999999999999988888776 677764
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]} Back     information, alignment and structure
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]} Back     information, alignment and structure
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure