Citrus Sinensis ID: 046799


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110----
FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL
cEEEccccccccEEEEEEEcccccccccccccEEEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHccccccccccEEEEEEcccccccccccEEEEEc
cEEEccccccEEEEEEEEEccEEccccccccEEcEEcccccccHHHHHHHHHHHHHHHHHHHcccEEEEEccccHHHcccccccEEEEEEEEEEEEccEccccccHccEEEEEc
flvaspetheitdfcsfytlpssilgnpnystLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLkelkfgpgdgklhYYLYNYRIRQAVLASELGLVLL
flvaspetheiTDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL
FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL
*********EITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLV**
FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL
********HEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL
FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query114 2.2.26 [Sep-21-2011]
Q9LTR9434 Glycylpeptide N-tetradeca yes no 1.0 0.262 0.815 1e-51
Q94L32430 Putative glycylpeptide N- no no 0.991 0.262 0.628 4e-34
O70311529 Glycylpeptide N-tetradeca yes no 0.973 0.209 0.592 9e-34
Q5RAF3496 Glycylpeptide N-tetradeca yes no 0.903 0.207 0.625 2e-33
Q8K1Q0496 Glycylpeptide N-tetradeca no no 0.903 0.207 0.625 2e-33
P30419496 Glycylpeptide N-tetradeca yes no 0.903 0.207 0.625 2e-33
O70310496 Glycylpeptide N-tetradeca no no 0.903 0.207 0.625 2e-33
O60551498 Glycylpeptide N-tetradeca no no 0.973 0.222 0.592 1e-32
P31717497 Glycylpeptide N-tetradeca yes no 0.903 0.207 0.619 5e-32
Q9N181498 Glycylpeptide N-tetradeca no no 0.903 0.206 0.605 9e-32
>sp|Q9LTR9|NMT1_ARATH Glycylpeptide N-tetradecanoyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=2 Back     alignment and function desciption
 Score =  201 bits (511), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 93/114 (81%), Positives = 106/114 (92%)

Query: 1   FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAK 60
           +LV SPETH++TDFCSFYTLPS+ILGNPNY+TLKAAYSYYNV+T+T  LQLMNDALIV+K
Sbjct: 321 YLVESPETHDVTDFCSFYTLPSTILGNPNYTTLKAAYSYYNVATQTSFLQLMNDALIVSK 380

Query: 61  QKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL 114
           QK FDVFNALDVM NESFLKELKFGPGDG+LHYYLYNYR++ A+  +ELGLVLL
Sbjct: 381 QKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRLKSALKPAELGLVLL 434




Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins. Can also use decanoyl-CoA and lauroyl-CoA as substrates.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 9EC: 7
>sp|Q94L32|NMT2_ARATH Putative glycylpeptide N-tetradecanoyltransferase 2 OS=Arabidopsis thaliana GN=NMT2 PE=5 SV=1 Back     alignment and function description
>sp|O70311|NMT2_MOUSE Glycylpeptide N-tetradecanoyltransferase 2 OS=Mus musculus GN=Nmt2 PE=1 SV=1 Back     alignment and function description
>sp|Q5RAF3|NMT1_PONAB Glycylpeptide N-tetradecanoyltransferase 1 OS=Pongo abelii GN=NMT1 PE=2 SV=1 Back     alignment and function description
>sp|Q8K1Q0|NMT1_RAT Glycylpeptide N-tetradecanoyltransferase 1 OS=Rattus norvegicus GN=Nmt1 PE=2 SV=1 Back     alignment and function description
>sp|P30419|NMT1_HUMAN Glycylpeptide N-tetradecanoyltransferase 1 OS=Homo sapiens GN=NMT1 PE=1 SV=2 Back     alignment and function description
>sp|O70310|NMT1_MOUSE Glycylpeptide N-tetradecanoyltransferase 1 OS=Mus musculus GN=Nmt1 PE=1 SV=1 Back     alignment and function description
>sp|O60551|NMT2_HUMAN Glycylpeptide N-tetradecanoyltransferase 2 OS=Homo sapiens GN=NMT2 PE=1 SV=1 Back     alignment and function description
>sp|P31717|NMT1_BOVIN Glycylpeptide N-tetradecanoyltransferase 1 OS=Bos taurus GN=NMT1 PE=1 SV=2 Back     alignment and function description
>sp|Q9N181|NMT2_BOVIN Glycylpeptide N-tetradecanoyltransferase 2 OS=Bos taurus GN=NMT2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query114
255546149 438 n-myristoyl transferase, putative [Ricin 1.0 0.260 0.929 1e-55
449452524 434 PREDICTED: glycylpeptide N-tetradecanoyl 1.0 0.262 0.903 2e-54
225442223 434 PREDICTED: glycylpeptide N-tetradecanoyl 1.0 0.262 0.885 2e-53
224091240 436 predicted protein [Populus trichocarpa] 1.0 0.261 0.894 2e-53
255560721 381 n-myristoyl transferase, putative [Ricin 1.0 0.299 0.868 1e-52
224122458 436 predicted protein [Populus trichocarpa] 1.0 0.261 0.885 1e-52
147772445 337 hypothetical protein VITISV_014089 [Viti 0.964 0.326 0.9 2e-52
297743047 442 unnamed protein product [Vitis vinifera] 0.991 0.255 0.867 3e-52
357136120 437 PREDICTED: glycylpeptide N-tetradecanoyl 1.0 0.260 0.850 3e-52
356530405 434 PREDICTED: glycylpeptide N-tetradecanoyl 1.0 0.262 0.885 4e-52
>gi|255546149|ref|XP_002514134.1| n-myristoyl transferase, putative [Ricinus communis] gi|223546590|gb|EEF48088.1| n-myristoyl transferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  219 bits (559), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 106/114 (92%), Positives = 109/114 (95%)

Query: 1   FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAK 60
           FLV SPETHEITDFCSFYTLPSSILGN NYSTLKAAYSYYNV+TKTPLLQLMNDALIVAK
Sbjct: 325 FLVESPETHEITDFCSFYTLPSSILGNQNYSTLKAAYSYYNVATKTPLLQLMNDALIVAK 384

Query: 61  QKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL 114
           QKDFDVFNALDVMQNESFLKELKFGPGDG+LHYYLYNYRIR A+  SELGLVLL
Sbjct: 385 QKDFDVFNALDVMQNESFLKELKFGPGDGQLHYYLYNYRIRSALTPSELGLVLL 438




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449452524|ref|XP_004144009.1| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like isoform 1 [Cucumis sativus] gi|449452526|ref|XP_004144010.1| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like isoform 2 [Cucumis sativus] gi|449489897|ref|XP_004158452.1| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like isoform 1 [Cucumis sativus] gi|449489899|ref|XP_004158453.1| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like isoform 2 [Cucumis sativus] Back     alignment and taxonomy information
>gi|225442223|ref|XP_002277829.1| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224091240|ref|XP_002309211.1| predicted protein [Populus trichocarpa] gi|222855187|gb|EEE92734.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255560721|ref|XP_002521374.1| n-myristoyl transferase, putative [Ricinus communis] gi|223539452|gb|EEF41042.1| n-myristoyl transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224122458|ref|XP_002330486.1| predicted protein [Populus trichocarpa] gi|222872420|gb|EEF09551.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147772445|emb|CAN67347.1| hypothetical protein VITISV_014089 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297743047|emb|CBI35914.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|357136120|ref|XP_003569654.1| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|356530405|ref|XP_003533772.1| PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query114
TAIR|locus:2164580434 NMT1 "myristoyl-CoA:protein N- 1.0 0.262 0.815 2.9e-48
UNIPROTKB|F1M110478 Nmt2 "Glycylpeptide N-tetradec 0.973 0.232 0.601 2.9e-32
RGD|1303175529 Nmt2 "N-myristoyltransferase 2 0.973 0.209 0.601 4.3e-32
UNIPROTKB|E9PTJ6529 Nmt2 "Glycylpeptide N-tetradec 0.973 0.209 0.601 4.3e-32
UNIPROTKB|F1MZK0496 NMT1 "Glycylpeptide N-tetradec 0.903 0.207 0.625 7.7e-32
UNIPROTKB|E2RPZ9496 NMT1 "Glycylpeptide N-tetradec 0.903 0.207 0.625 7.7e-32
UNIPROTKB|P30419496 NMT1 "Glycylpeptide N-tetradec 0.903 0.207 0.625 7.7e-32
UNIPROTKB|F1RR06496 NMT1 "Glycylpeptide N-tetradec 0.903 0.207 0.625 7.7e-32
MGI|MGI:102579496 Nmt1 "N-myristoyltransferase 1 0.903 0.207 0.625 7.7e-32
RGD|628642496 Nmt1 "N-myristoyltransferase 1 0.903 0.207 0.625 7.7e-32
TAIR|locus:2164580 NMT1 "myristoyl-CoA:protein N-myristoyltransferase" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 93/114 (81%), Positives = 106/114 (92%)

Query:     1 FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAK 60
             +LV SPETH++TDFCSFYTLPS+ILGNPNY+TLKAAYSYYNV+T+T  LQLMNDALIV+K
Sbjct:   321 YLVESPETHDVTDFCSFYTLPSTILGNPNYTTLKAAYSYYNVATQTSFLQLMNDALIVSK 380

Query:    61 QKDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL 114
             QK FDVFNALDVM NESFLKELKFGPGDG+LHYYLYNYR++ A+  +ELGLVLL
Sbjct:   381 QKGFDVFNALDVMHNESFLKELKFGPGDGQLHYYLYNYRLKSALKPAELGLVLL 434




GO:0004379 "glycylpeptide N-tetradecanoyltransferase activity" evidence=IEA;IDA
GO:0005737 "cytoplasm" evidence=ISM
GO:0006499 "N-terminal protein myristoylation" evidence=IEA;IDA
GO:0005840 "ribosome" evidence=IDA
GO:0019107 "myristoyltransferase activity" evidence=ISS;IDA
GO:0040007 "growth" evidence=IMP
GO:0005829 "cytosol" evidence=IDA
GO:0010064 "embryonic shoot morphogenesis" evidence=IMP
GO:0006511 "ubiquitin-dependent protein catabolic process" evidence=RCA
GO:0009853 "photorespiration" evidence=RCA
GO:0019722 "calcium-mediated signaling" evidence=RCA
GO:0051788 "response to misfolded protein" evidence=RCA
GO:0080129 "proteasome core complex assembly" evidence=RCA
UNIPROTKB|F1M110 Nmt2 "Glycylpeptide N-tetradecanoyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
RGD|1303175 Nmt2 "N-myristoyltransferase 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E9PTJ6 Nmt2 "Glycylpeptide N-tetradecanoyltransferase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1MZK0 NMT1 "Glycylpeptide N-tetradecanoyltransferase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RPZ9 NMT1 "Glycylpeptide N-tetradecanoyltransferase" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|P30419 NMT1 "Glycylpeptide N-tetradecanoyltransferase 1" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1RR06 NMT1 "Glycylpeptide N-tetradecanoyltransferase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:102579 Nmt1 "N-myristoyltransferase 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|628642 Nmt1 "N-myristoyltransferase 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LTR9NMT1_ARATH2, ., 3, ., 1, ., 9, 70.81571.00.2626yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.3.1LOW CONFIDENCE prediction!
3rd Layer2.3.1.97LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query114
pfam02799190 pfam02799, NMT_C, Myristoyl-CoA:protein N-myristoy 7e-63
COG5092451 COG5092, NMT1, N-myristoyl transferase [Lipid meta 6e-30
>gnl|CDD|202401 pfam02799, NMT_C, Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain Back     alignment and domain information
 Score =  188 bits (481), Expect = 7e-63
 Identities = 69/112 (61%), Positives = 86/112 (76%), Gaps = 1/112 (0%)

Query: 3   VASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQK 62
           V   E  +ITDF SFY+LPS+++GNP + TLKAAYS+Y  +T T L QLMNDALI+AK  
Sbjct: 79  VVENEDGKITDFFSFYSLPSTVIGNPKHKTLKAAYSFYYAATSTRLKQLMNDALILAKNL 138

Query: 63  DFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLA-SELGLVL 113
            FDVFNALD+M N+ FL++LKFGPGDG+L+YYLYNYR    +   S +GLVL
Sbjct: 139 GFDVFNALDLMDNKLFLEDLKFGPGDGQLNYYLYNYRCPPIMGGISGVGLVL 190


The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. Length = 190

>gnl|CDD|227423 COG5092, NMT1, N-myristoyl transferase [Lipid metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 114
PF02799190 NMT_C: Myristoyl-CoA:protein N-myristoyltransferas 100.0
KOG2779421 consensus N-myristoyl transferase [Lipid transport 100.0
COG5092451 NMT1 N-myristoyl transferase [Lipid metabolism] 100.0
PLN02706150 glucosamine 6-phosphate N-acetyltransferase 80.66
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2 Back     alignment and domain information
Probab=100.00  E-value=2.9e-58  Score=355.48  Aligned_cols=112  Identities=62%  Similarity=1.055  Sum_probs=100.9

Q ss_pred             CeeecCCCCccceeEEEeeccceeccCCCccceeeeeeEEEecCCCCHHHHHHHHHHHHHhCCCcEEeeeccccChhhhh
Q 046799            1 FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLK   80 (114)
Q Consensus         1 yVve~~~~~~itdf~SFY~Lpstvi~~~~~~~l~aAY~~Y~~~~~~~l~~L~~dali~Ak~~gfDVFNaL~im~N~~fL~   80 (114)
                      ||||+++ |+||||+|||+||||||+|++|++|+|||+||++++++||++||+||||+||+.|||||||||+|+|++||+
T Consensus        78 yVve~~~-~~ITDf~SFY~Lpstvi~~~k~~~l~aAY~fY~~~~~~~l~~Lm~DaLi~Ak~~gfDVFNaLd~mdN~~fL~  156 (190)
T PF02799_consen   78 YVVEDPD-GKITDFFSFYSLPSTVIGNPKHKTLKAAYSFYYVATSTRLKELMNDALILAKNEGFDVFNALDLMDNSSFLE  156 (190)
T ss_dssp             EEEEETT-SEEEEEEEEEEEEEEESSSSSSSEEEEEEEEEEEESSSHHHHHHHHHHHHHHHTTESEEEEESTTTGGGTTT
T ss_pred             EEEecCC-CceeeEEEEeecceeecCCCCccceeeeeeeeeeecCCCHHHHHHHHHHHHHHcCCCEEehhhhccchhhHh
Confidence            7999987 899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCccceeEEEEeccCCccCCC-CceeEEe
Q 046799           81 ELKFGPGDGKLHYYLYNYRIRQAVLA-SELGLVL  113 (114)
Q Consensus        81 ~lkF~~GdG~L~YYLyNw~~~~~i~~-~~vglvl  113 (114)
                      +|||++|||+|||||||||||+..+| ++|||||
T Consensus       157 ~lKFg~GdG~L~YYLyNwr~~~i~~~~~~vGlVl  190 (190)
T PF02799_consen  157 DLKFGPGDGNLNYYLYNWRCPPIMGPISKVGLVL  190 (190)
T ss_dssp             TTT-EEEEEEEEEEEESEB-----GSBGGBE---
T ss_pred             hCCccCCCCCeEEEEEeccCCCCCCCccccceeC
Confidence            99999999999999999999864456 9999997



3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....

>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism] Back     alignment and domain information
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism] Back     alignment and domain information
>PLN02706 glucosamine 6-phosphate N-acetyltransferase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query114
1rxt_A496 Crystal Structure Of Human Myristoyl-Coa:protein N- 3e-34
3iu1_A383 Crystal Structure Of Human Type-I N-Myristoyltransf 5e-34
4a95_A384 Plasmodium Vivax N-Myristoyltransferase With Quinol 5e-30
4b10_A385 Plasmodium Vivax N-Myristoyltransferase With A Non- 6e-30
2wuu_A421 Structure Of N-Myristoyltransferase From L. Donovan 6e-24
3h5z_A438 Crystal Structure Of Leishmania Major N-Myristoyltr 8e-24
2wsa_A438 Crystal Structure Of Leishmania Major N- Myristoylt 8e-24
2nmt_A422 Myristoyl-Coa:protein N-Myristoyltransferase Bound 2e-19
2p6e_A455 Crystal Structures Of Saccharomyces Cerevisiae N-My 3e-18
1nmt_A392 N-Myristoyl Transferase From Candida Albicans At 2. 8e-16
>pdb|1RXT|A Chain A, Crystal Structure Of Human Myristoyl-Coa:protein N- Myristoyltransferase. Length = 496 Back     alignment and structure

Iteration: 1

Score = 139 bits (351), Expect = 3e-34, Method: Composition-based stats. Identities = 64/104 (61%), Positives = 88/104 (84%), Gaps = 1/104 (0%) Query: 10 EITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNA 69 E+TDF SFYTLPS+I+ +P + +LKAAYS+YNV T+TPLL LM+DAL++AK K FDVFNA Sbjct: 393 EVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNA 452 Query: 70 LDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVL 113 LD+M+N++FL++LKFG GDG L YYLYN++ ++ A ++G+VL Sbjct: 453 LDLMENKTFLEKLKFGIGDGNLQYYLYNWKC-PSMGAEKVGIVL 495
>pdb|3IU1|A Chain A, Crystal Structure Of Human Type-I N-Myristoyltransferase With Bound Myristoyl-Coa Length = 383 Back     alignment and structure
>pdb|4A95|A Chain A, Plasmodium Vivax N-Myristoyltransferase With Quinoline Inhibitor Length = 384 Back     alignment and structure
>pdb|4B10|A Chain A, Plasmodium Vivax N-Myristoyltransferase With A Non- Hydrolysable Co-Factor Length = 385 Back     alignment and structure
>pdb|2WUU|A Chain A, Structure Of N-Myristoyltransferase From L. Donovani Length = 421 Back     alignment and structure
>pdb|3H5Z|A Chain A, Crystal Structure Of Leishmania Major N-Myristoyltransferase With Bound Myristoyl-Coa Length = 438 Back     alignment and structure
>pdb|2WSA|A Chain A, Crystal Structure Of Leishmania Major N- Myristoyltransferase (Nmt) With Bound Myristoyl-Coa And A Pyrazole Sulphonamide Ligand (Ddd85646) Length = 438 Back     alignment and structure
>pdb|2NMT|A Chain A, Myristoyl-Coa:protein N-Myristoyltransferase Bound To Myristoyl-Coa And Peptide Analogs Length = 422 Back     alignment and structure
>pdb|2P6E|A Chain A, Crystal Structures Of Saccharomyces Cerevisiae N-Myristoyltransferase With Bound Myristoyl-Coa Length = 455 Back     alignment and structure
>pdb|1NMT|A Chain A, N-Myristoyl Transferase From Candida Albicans At 2.45 A Length = 392 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query114
3iu1_A383 Glycylpeptide N-tetradecanoyltransferase 1; N-myri 7e-50
4a95_A384 Glycylpeptide N-tetradecanoyltransferase; malaria; 1e-49
1rxt_A496 Myristoyl-, glycylpeptide N-tetradecanoyltransfera 3e-49
2wuu_A421 N-myristoyltransferase; acyltransferase; HET: NHM; 9e-47
1iyk_A392 Myristoyl-COA:protein N-myristoyltransferase; HET: 3e-42
1iic_A422 Peptide N-myristoyltransferase; HET: MYA; 2.20A {S 5e-41
>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* Length = 383 Back     alignment and structure
 Score =  161 bits (408), Expect = 7e-50
 Identities = 66/112 (58%), Positives = 88/112 (78%), Gaps = 1/112 (0%)

Query: 2   LVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQ 61
            V      E+TDF SFYTLPS+I+ +P + +LKAAYS+YNV T+TPLL LM+DAL++AK 
Sbjct: 272 FVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKM 331

Query: 62  KDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVL 113
           K FDVFNALD+M+N++FL++LKFG GDG L YYLYN++    + A ++GLVL
Sbjct: 332 KGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKCPS-MGAEKVGLVL 382


>4a95_A Glycylpeptide N-tetradecanoyltransferase; malaria; HET: 9MT NHM; 1.55A {Plasmodium vivax} Length = 384 Back     alignment and structure
>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 Length = 496 Back     alignment and structure
>2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* Length = 421 Back     alignment and structure
>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A Length = 392 Back     alignment and structure
>1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* Length = 422 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query114
3iu1_A383 Glycylpeptide N-tetradecanoyltransferase 1; N-myri 100.0
2wuu_A421 N-myristoyltransferase; acyltransferase; HET: NHM; 100.0
1iic_A422 Peptide N-myristoyltransferase; HET: MYA; 2.20A {S 100.0
1iyk_A392 Myristoyl-COA:protein N-myristoyltransferase; HET: 100.0
1rxt_A496 Myristoyl-, glycylpeptide N-tetradecanoyltransfera 100.0
4b14_A385 Glycylpeptide N-tetradecanoyltransferase; malaria, 100.0
2eui_A153 Probable acetyltransferase; dimer, structural geno 87.41
3t90_A149 Glucose-6-phosphate acetyltransferase 1; GNAT fold 86.79
2vez_A190 Putative glucosamine 6-phosphate acetyltransferase 83.08
>3iu1_A Glycylpeptide N-tetradecanoyltransferase 1; N-myristoyltransferase, NMT1, acyltransferase, phosphoprotein, structural genomics; HET: MYA; 1.42A {Homo sapiens} PDB: 3iu2_A* 3iwe_A* 3jtk_A* Back     alignment and structure
Probab=100.00  E-value=1.2e-53  Score=355.75  Aligned_cols=112  Identities=60%  Similarity=1.022  Sum_probs=108.7

Q ss_pred             CeeecCCCCccceeEEEeeccceeccCCCccceeeeeeEEEecCCCCHHHHHHHHHHHHHhCCCcEEeeeccccChhhhh
Q 046799            1 FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQKDFDVFNALDVMQNESFLK   80 (114)
Q Consensus         1 yVve~~~~~~itdf~SFY~Lpstvi~~~~~~~l~aAY~~Y~~~~~~~l~~L~~dali~Ak~~gfDVFNaL~im~N~~fL~   80 (114)
                      ||||++ +|+||||+|||+||||||+|++|++|+|||+||+++|+++|++||+||||+||+.|||||||||+|+|++||+
T Consensus       272 yVve~~-~g~ITDf~SFY~Lpstvl~~~~~~~l~aAY~fY~~~t~~~l~~Lm~DaLi~Ak~~gfDVFNaL~~m~N~~fL~  350 (383)
T 3iu1_A          272 FVVENA-NGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLE  350 (383)
T ss_dssp             EEEECT-TSCEEEEEEEEECCEEETTCSSCCEECEEEECCCBCSSSCHHHHHHHHHHHHHHTTCSEEEEESCTTGGGTTT
T ss_pred             EEEECC-CCcEeeEEEEEEccceecCCCCcceeeeEEEEEEeecCCCHHHHHHHHHHHHHHcCCeEEEcccccccHHHHH
Confidence            799987 4899999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCCccceeEEEEeccCCccCCCCceeEEeC
Q 046799           81 ELKFGPGDGKLHYYLYNYRIRQAVLASELGLVLL  114 (114)
Q Consensus        81 ~lkF~~GdG~L~YYLyNw~~~~~i~~~~vglvl~  114 (114)
                      +|||++|||+||||||||||+ .++|++|||||.
T Consensus       351 ~lKFg~GdG~L~YYLyNwr~~-~~~~~~vglvl~  383 (383)
T 3iu1_A          351 KLKFGIGDGNLQYYLYNWKCP-SMGAEKVGLVLQ  383 (383)
T ss_dssp             TTTCEEEEEEEEEEEESCBCC-CBCGGGBCCCCC
T ss_pred             HcCCCCCCCceEEEEeeccCC-CCChhHeeEEeC
Confidence            999999999999999999997 599999999973



>2wuu_A N-myristoyltransferase; acyltransferase; HET: NHM; 1.42A {Leishmania donovani} PDB: 3h5z_A* 4a2z_A* 4a30_A* 4a31_A* 4a32_A* 4a33_A* 2wsa_A* Back     alignment and structure
>1iic_A Peptide N-myristoyltransferase; HET: MYA; 2.20A {Saccharomyces cerevisiae} SCOP: d.108.1.2 d.108.1.2 PDB: 1iid_A* 2nmt_A* 2p6e_A* 2p6f_A* 2p6g_A* Back     alignment and structure
>1iyk_A Myristoyl-COA:protein N-myristoyltransferase; HET: MYA MIM; 2.30A {Candida albicans} SCOP: d.108.1.2 d.108.1.2 PDB: 1iyl_A* 1nmt_A Back     alignment and structure
>1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 Back     alignment and structure
>4b14_A Glycylpeptide N-tetradecanoyltransferase; malaria, drug design; HET: NHW 4XB; 1.50A {Plasmodium vivax} PDB: 4b11_A* 4b12_A* 4b13_A* 4b10_A* 4a95_A* Back     alignment and structure
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1 Back     alignment and structure
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana} Back     alignment and structure
>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 114
d1rxta2201 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT 3e-51
d1iyka2227 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT 4e-48
d1iica2237 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT 1e-45
>d1rxta2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} Length = 201 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  158 bits (401), Expect = 3e-51
 Identities = 65/112 (58%), Positives = 89/112 (79%), Gaps = 1/112 (0%)

Query: 2   LVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTPLLQLMNDALIVAKQ 61
            V      E+TDF SFYTLPS+I+ +P + +LKAAYS+YNV T+TPLL LM+DAL++AK 
Sbjct: 90  FVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKM 149

Query: 62  KDFDVFNALDVMQNESFLKELKFGPGDGKLHYYLYNYRIRQAVLASELGLVL 113
           K FDVFNALD+M+N++FL++LKFG GDG L YYLYN++   ++ A ++G+VL
Sbjct: 150 KGFDVFNALDLMENKTFLEKLKFGIGDGNLQYYLYNWKC-PSMGAEKVGIVL 200


>d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} Length = 227 Back     information, alignment and structure
>d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 237 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query114
d1iyka2227 N-myristoyl transferase, NMT {Yeast (Candida albic 100.0
d1rxta2201 N-myristoyl transferase, NMT {Human (Homo sapiens) 100.0
d1iica2237 N-myristoyl transferase, NMT {Baker's yeast (Sacch 100.0
d2fe7a1156 Probable N-acetyltransferase PA0478 {Pseudomonas a 87.87
d2euia1153 Probable acetyltransferase PA4026 {Pseudomonas aer 86.5
>d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-myristoyl transferase, NMT
domain: N-myristoyl transferase, NMT
species: Yeast (Candida albicans) [TaxId: 5476]
Probab=100.00  E-value=8.6e-57  Score=352.02  Aligned_cols=112  Identities=44%  Similarity=0.728  Sum_probs=106.9

Q ss_pred             CeeecCCCCccceeEEEeeccceeccCCCccceeeeeeEEEecCCCC-------HHHHHHHHHHHHHhCCCcEEeeeccc
Q 046799            1 FLVASPETHEITDFCSFYTLPSSILGNPNYSTLKAAYSYYNVSTKTP-------LLQLMNDALIVAKQKDFDVFNALDVM   73 (114)
Q Consensus         1 yVve~~~~~~itdf~SFY~Lpstvi~~~~~~~l~aAY~~Y~~~~~~~-------l~~L~~dali~Ak~~gfDVFNaL~im   73 (114)
                      ||||++ +|+||||+|||+||||||+|++|++|+|||+||+++++.+       |++||+||||+||+.|||||||||+|
T Consensus        95 YVve~~-~g~ItDF~SFY~Lpstvi~~~~h~~l~aAY~fY~~~~~~~~~~~k~~l~~Li~Dali~Ak~~~fDVFNaL~~m  173 (227)
T d1iyka2          95 YVVEDE-NGIITDYFSYYLLPFTVLDNAQHDELGIAYLFYYASDSFEKPNYKKRLNELITDALITSKKFGVDVFNCLTCQ  173 (227)
T ss_dssp             EEEECT-TSCEEEEEEEEECCEEESSCSSCSEECEEEEEEEEETTTTSTTHHHHHHHHHHHHHHHHGGGTCSEEEEESCT
T ss_pred             EEEECC-CCcEeEEEEEeeccHHhhCCCccceEEEEEEEEEEeecccchhhhhhHHHHHHHHHHHHHHcCCcEEEccccc
Confidence            799984 5899999999999999999999999999999999999765       99999999999999999999999999


Q ss_pred             cChhhhhhcCCCCCccceeEEEEeccCCccC--------------CCCceeEEeC
Q 046799           74 QNESFLKELKFGPGDGKLHYYLYNYRIRQAV--------------LASELGLVLL  114 (114)
Q Consensus        74 ~N~~fL~~lkF~~GdG~L~YYLyNw~~~~~i--------------~~~~vglvl~  114 (114)
                      +|++||++|||++|||+|||||||||||+ |              +|++||+|||
T Consensus       174 dN~~fLe~lKFg~GdG~L~YYLyNwr~~~-i~gg~~~~~~~~~~~~~s~vG~Vll  227 (227)
T d1iyka2         174 DNTYFLKDCKFGSGDGFLNYYLFNYRTFP-MDGGIDKKTKEVVEDQTSGIGVVLL  227 (227)
T ss_dssp             TGGGTTTTTTCEEEEEEEEEEEETCBCCC-CCCSBCTTTCCBCTTCCCSEECCCC
T ss_pred             ccHHHHHHcCCccCCCcEEEEEEeccCCC-ccCccccccccccccCCCceeEEeC
Confidence            99999999999999999999999999975 5              4899999996



>d1rxta2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure