Citrus Sinensis ID: 046807

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF
Secondary Structure (PSIPRED)
ccccccHHHHHHHHHHHHHHHcccccHHcccHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccHHHHHHHHHcHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHcHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccHHHHHHcccccccEcHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccHHccccHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
LGLAYHFETEIRKILHNIYNsnkdynwrkenLYATSLEFRLLrqhgypvsqdvfngfkddkggficNDFKEIMSLHeasyysfegesIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALelplhwkvpmleaRWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF
Flexible Loop (DISEMBL)
LGLAYHFETEIRKILHNiynsnkdynWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRAlelplhwkvpmlEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF
Low Complexity Region (SEG)
LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF
Disordered region (IsUnstruct)
**LAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQ******
Disordered Region (DISOPRED)
LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMI*KSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF
Disordered Region (DISEMBL)
LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF
Disordered Region (DISPRO)
LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
Q8L5K3	606	(R)-limonene synthase 1 O	N/A	no	1.0	0.288	0.88	2e-81
Q6PWU2	590	(-)-alpha-terpineol synth	yes	no	0.971	0.288	0.548	1e-49
Q93X23	597	Myrcene synthase, chlorop	N/A	no	0.971	0.284	0.514	3e-47
Q2XSC4	538	Exo-alpha-bergamotene syn	N/A	no	0.96	0.312	0.517	3e-44
B3TPQ7	592	Alpha-terpineol synthase,	N/A	no	0.954	0.282	0.488	2e-41
Q6EJ97	608	Isoprene synthase, chloro	N/A	no	0.96	0.276	0.508	2e-39
Q9AR86	595	Isoprene synthase, chloro	N/A	no	0.977	0.287	0.485	4e-39
Q7XAS7	595	Isoprene synthase, chloro	N/A	no	0.977	0.287	0.480	1e-38
A7IZZ2	615	(+)-alpha-pinene synthase	N/A	no	0.988	0.281	0.469	2e-38
Q50L36	595	Isoprene synthase, chloro	N/A	no	0.977	0.287	0.480	4e-38

>sp|Q8L5K3|RLC1_CITLI (R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1

 Score =  301 bits (770), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 154/175 (88%), Positives = 166/175 (94%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGLA+ FETEIR IL+NIYN+NKDYNWRKENLYATSLEFRLLRQHGYPVSQ+VFNGFKDD
Sbjct: 114 LGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDD 173

Query: 61  KGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAK 120
           +GGFIC+DFK I+SLHEASYYS EGESIMEEAWQFTSKHLKEVMISK+ + DVFVAEQAK
Sbjct: 174 QGGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMISKNMEEDVFVAEQAK 233

Query: 121 RALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           RALELPLHWKVPMLEARWFI +YE+REDKNHLLLELAKMEFN LQAIYQEELK+ 
Sbjct: 234 RALELPLHWKVPMLEARWFIHIYERREDKNHLLLELAKMEFNTLQAIYQEELKEI 288

Citrus limon (taxid: 2708)
EC: 4EC: .EC: 2EC: .EC: 3EC: .EC: 2EC: 0

>sp|Q6PWU2|ATESY_VITVI (-)-alpha-terpineol synthase OS=Vitis vinifera PE=1 SV=1

 Score =  195 bits (496), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 97/177 (54%), Positives = 130/177 (73%), Gaps = 7/177 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNS-NKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKD 59
           LG+ YHF+ EI++IL+ IYN  N+   W+K++LYAT+LEFRLLRQHGY V QDVF+ FKD
Sbjct: 110 LGIYYHFKDEIKRILNGIYNQYNRHEEWQKDDLYATALEFRLLRQHGYDVPQDVFSRFKD 169

Query: 60  DKGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVA 116
           D G F   +C D K ++ L+EASY   +GES ME+A  F  +HL + +     Q    +A
Sbjct: 170 DTGSFKACLCEDMKGMLCLYEASYLCVQGESTMEQARDFAHRHLGKGLEQNIDQN---LA 226

Query: 117 EQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
            + K ALELPLHW++P LEARWFIDVYEKR+D N +LLE AK++FN++QA +QE+L+
Sbjct: 227 IEVKHALELPLHWRMPRLEARWFIDVYEKRQDMNPILLEFAKLDFNMVQATHQEDLR 283

Mediates the conversion of geranyl diphosphate into alpha-terpineol, a monoterpenol. Monoterpenols contribute to the final grape and wine aroma and flavor. Also forms some 1,8-cineole and traces of other monoterpenoids.

Vitis vinifera (taxid: 29760)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 1

EC: 1

>sp|Q93X23|MYRS_QUEIL Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1

 Score =  187 bits (476), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 91/177 (51%), Positives = 135/177 (76%), Gaps = 7/177 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYN-WRKENLYATSLEFRLLRQHGYPVSQDVFNGFKD 59
           LGL+YHFE EI++IL  +YN++   + W+ ENLYAT+L+FRLLRQHGY VSQ+VFN FKD
Sbjct: 118 LGLSYHFEEEIKRILDGVYNNDHGGDTWKAENLYATALKFRLLRQHGYSVSQEVFNSFKD 177

Query: 60  DKGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVA 116
           ++G F   +C D K ++SL+EAS++  EGE+I+EEA  F++KHL+E  + ++K+ ++  A
Sbjct: 178 ERGSFKACLCEDTKGMLSLYEASFFLIEGENILEEARDFSTKHLEE-YVKQNKEKNL--A 234

Query: 117 EQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
                +LE PLHW++P LEARWFI++Y   +D N +LLE A+++FN++QA +Q +LK
Sbjct: 235 TLVNHSLEFPLHWRMPRLEARWFINIYRHNQDVNPILLEFAELDFNIVQAAHQADLK 291

Involved in monoterpene (C10) biosynthesis. The major product is myrcene followed by minor amounts (1.2%) of the cyclic monoterpene limonene.

Quercus ilex (taxid: 58334)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 5

>sp|Q2XSC4|LABER_LAVAN Exo-alpha-bergamotene synthase OS=Lavandula angustifolia PE=1 SV=1

 Score =  177 bits (449), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 91/176 (51%), Positives = 127/176 (72%), Gaps = 8/176 (4%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHF+  I K+L+NIY S+  Y   +++L+ T+L+FRLLRQHGY V QDVF+ F DD
Sbjct: 65  LGISYHFKDGIAKMLNNIYKSDSKY--MEKDLHLTALKFRLLRQHGYRVPQDVFSSFMDD 122

Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
           +G F   +  D   ++SL+EAS+ S EGESI++ A  F+S HL E++    + G+  +AE
Sbjct: 123 EGNFEAWVVEDVSVLVSLYEASHISVEGESILDMAKDFSSHHLTEMV---EQIGEACLAE 179

Query: 118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
           Q KR LELPLHW+V  LEARWF+  YE R + N  L+ELAK++FN++QA YQ+ELK
Sbjct: 180 QVKRTLELPLHWRVGRLEARWFVQAYETRPNSNPTLVELAKLDFNMVQAKYQDELK 235

Catalyzes a mixture of sesquiterpenoids from (2E,6E)-farnesyl diphosphate. Catalyzes the formation of exo-alpha-bergamotene, as well as (E)-nerolidol, (Z)-alpha-bisabolene, (E)-beta-farnesene and beta-sesquiphellandrene. Also has activity towards geranyl diphosphate, but to a much lesser extent.

Lavandula angustifolia (taxid: 39329)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 8

EC: 1

>sp|B3TPQ7|ATESY_MAGGA Alpha-terpineol synthase, chloroplastic OS=Magnolia grandiflora PE=1 SV=1

 Score =  167 bits (424), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 87/178 (48%), Positives = 119/178 (66%), Gaps = 11/178 (6%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG+ YHF+ EI++IL  I     +      +LYA +L FRLLRQHGY V Q VFN F DD
Sbjct: 115 LGVGYHFDKEIKEILKTISTEPNNMGLIDGDLYAMALYFRLLRQHGYEVPQGVFNRFMDD 174

Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVM--ISKSKQGDVFV 115
              F   +CND K ++SL+EASY + EGE+ ++EA  FT +HL+ +   I  + +G V  
Sbjct: 175 SSSFKASLCNDVKGMLSLYEASYLALEGETTLDEAKAFTYRHLRGLKGNIDSNLKGLV-- 232

Query: 116 AEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
               + ALELPLHW+V  LEARW+ID YE+ ED N LLLELAK++FN++Q +YQ +++
Sbjct: 233 ----EHALELPLHWRVLRLEARWYIDTYERMEDMNPLLLELAKLDFNIVQNVYQGQVR 286

Monoterpene synthase converting geranyl diphosphate into alpha-terpineol. In vitro, can also have an sesquiterpene synthase activity, converting farnesyl diphosphate into (E)-alpha-bisabolene (33.1%), alpha-bisabolene (18.7%), beta-sesquiphellandrene (15.8%), beta-bergamotene (12.6%), (Z)-alpha-farnesene (10.4%), and (Z)-alpha-bisabolene (9.4%).

Magnolia grandiflora (taxid: 3406)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 1

EC: 2

>sp|Q6EJ97|ISPS_PUEML Isoprene synthase, chloroplastic OS=Pueraria montana var. lobata GN=ISPS PE=1 SV=1

 Score =  161 bits (408), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/181 (50%), Positives = 124/181 (68%), Gaps = 13/181 (7%)

Query: 1   LGLAYHFETEIRKILHNIY--NSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFK 58
           LGL Y FE +I K L NI   + NK     K +L+AT+L FRLLRQHG+ VSQDVF  FK
Sbjct: 123 LGLTYKFEKDIIKALENIVLLDENKK---NKSDLHATALSFRLLRQHGFEVSQDVFERFK 179

Query: 59  DDKGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQG-DVF 114
           D +GGF   +  D + ++SL+EASY  FEGE+++EEA  F+  HLK  +    K+G +  
Sbjct: 180 DKEGGFSGELKGDVQGLLSLYEASYLGFEGENLLEEARTFSITHLKNNL----KEGINTK 235

Query: 115 VAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
           VAEQ   ALELP H ++  LEARWF+D YE +E  + LLLELAK++FN++Q ++Q+EL+D
Sbjct: 236 VAEQVSHALELPYHQRLHRLEARWFLDKYEPKEPHHQLLLELAKLDFNMVQTLHQKELQD 295

Query: 175 F 175
            
Sbjct: 296 L 296

Lyase that catalyzes the formation of isoprene from dimethylallyl diphosphate.

Pueraria montana var. lobata (taxid: 3893)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 2

EC: 7

>sp|Q9AR86|ISPS_POPCN Isoprene synthase, chloroplastic OS=Populus canescens GN=ISPS PE=1 SV=1

 Score =  160 bits (405), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 6/177 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGL Y FE++IR+ L    +S       K +L+AT+L FRLLRQHG+ VSQ+ F+GFKD 
Sbjct: 117 LGLGYRFESDIRRALDRFVSSGGFDGVTKTSLHATALSFRLLRQHGFEVSQEAFSGFKDQ 176

Query: 61  KGGFICN---DFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F+ N   D K I+SL+EAS+ + EGE+I++EA  F   HLKE  +S+ K G   +AE
Sbjct: 177 NGNFLENLKEDTKAILSLYEASFLALEGENILDEARVFAISHLKE--LSEEKIGKE-LAE 233

Query: 118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
           Q   ALELPLH +   LEA W I+ Y K+ED N +LLELA +++N++Q++YQ +L++
Sbjct: 234 QVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRE 290

Lyase that catalyzes the formation of isoprene from dimethylallyl diphosphate.

Populus canescens (taxid: 80863)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 2

EC: 7

>sp|Q7XAS7|ISPS_POPTM Isoprene synthase, chloroplastic OS=Populus tremuloides GN=ISPS PE=3 SV=1

 Score =  159 bits (401), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 120/177 (67%), Gaps = 6/177 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGL Y FE++IR+ L    +S       K +L+ T+L FRLLRQHG+ VSQ+ F+GFKD 
Sbjct: 117 LGLGYRFESDIRRALDRFVSSGGFDGVTKTSLHGTALSFRLLRQHGFEVSQEAFSGFKDQ 176

Query: 61  KGGFICN---DFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F+ N   D K I+SL+EAS+ + EGE+I++EA  F   HLKE  +S+ K G   +AE
Sbjct: 177 NGNFLENLKEDIKAILSLYEASFLALEGENILDEAKVFAISHLKE--LSEEKIGKE-LAE 233

Query: 118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
           Q   ALELPLH +   LEA W I+ Y K+ED N +LLELA +++N++Q++YQ +L++
Sbjct: 234 QVSHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRE 290

Lyase that catalyzes the formation of isoprene from dimethylallyl diphosphate.

Populus tremuloides (taxid: 3693)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 2

EC: 7

>sp|A7IZZ2|TPS2_CANSA (+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1

 Score =  158 bits (400), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 124/179 (69%), Gaps = 6/179 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL   + +       K +LYAT+LEFRLLR++GY + Q++FN FKD+
Sbjct: 132 LGISYHFENEIISILKEYFTNISTNKNPKYDLYATALEFRLLREYGYAIPQEIFNDFKDE 191

Query: 61  KGGFIC----NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKE--VMISKSKQGDVF 114
            G F      +D K +++L+EAS+Y   GE+I+EEA  FT+++LK   +MI ++   +  
Sbjct: 192 TGKFKASIKNDDIKGVLALYEASFYVKNGENILEEARVFTTEYLKRYVMMIDQNIILNDN 251

Query: 115 VAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
           +A   + ALE+PLHW+    EA+WFI+ YEK +DKN  LLE AK++FN+LQ+I+QE+LK
Sbjct: 252 MAILVRHALEMPLHWRTIRAEAKWFIEEYEKTQDKNGTLLEFAKLDFNMLQSIFQEDLK 310

Involved in monoterpene (C10) olefins biosynthesis. The major product is (+)-alpha-pinene.

Cannabis sativa (taxid: 3483)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: 4

>sp|Q50L36|ISPS_POPAL Isoprene synthase, chloroplastic OS=Populus alba GN=ISPS PE=1 SV=1

 Score =  157 bits (396), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 85/177 (48%), Positives = 119/177 (67%), Gaps = 6/177 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGL Y FE++IR  L    +S       K +L+ T+L FRLLRQHG+ VSQ+ F+GFKD 
Sbjct: 117 LGLGYRFESDIRGALDRFVSSGGFDAVTKTSLHGTALSFRLLRQHGFEVSQEAFSGFKDQ 176

Query: 61  KGGFICN---DFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F+ N   D K I+SL+EAS+ + EGE+I++EA  F   HLKE  +S+ K G   +AE
Sbjct: 177 NGNFLENLKEDIKAILSLYEASFLALEGENILDEAKVFAISHLKE--LSEEKIGKE-LAE 233

Query: 118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
           Q   ALELPLH +   LEA W I+ Y K+ED N +LLELA +++N++Q++YQ +L++
Sbjct: 234 QVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRE 290

Lyase that catalyzes the formation of isoprene from dimethylallyl diphosphate, but not from isopentenyl diphosphate or geranyl diphosphate.

Populus alba (taxid: 43335)

EC: 4

EC: .

EC: 2

EC: .

EC: 3

EC: .

EC: 2

EC: 7

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
49659435	606	d-limonene synthase [Citrus unshiu]	0.994	0.287	0.919	3e-91
21435708	606	(+)-limonene synthase 2 [Citrus limon]	1.0	0.288	0.897	1e-86
209446863	607	limonene synthase [Poncirus trifoliata]	0.994	0.286	0.885	2e-84
49659437	608	d-limonene synthase [Citrus unshiu]	1.0	0.287	0.875	2e-83
41017756	606	RecName: Full=(R)-limonene synthase 1; A	1.0	0.288	0.88	8e-80
394556815	612	geraniol synthase [Citrus jambhiri]	1.0	0.285	0.885	5e-79
322424201	607	limonene synthase [Murraya paniculata]	0.982	0.283	0.731	4e-69
45934586	590	(-)-a-terpineol synthase [Vitis vinifera	0.971	0.288	0.548	4e-48
75223392	590	RecName: Full=(-)-alpha-terpineol syntha	0.971	0.288	0.548	5e-48
359494919	590	PREDICTED: myrcene synthase, chloroplast	0.971	0.288	0.542	5e-47

>gi|49659435|dbj|BAD27256.1| d-limonene synthase [Citrus unshiu]

 Score =  338 bits (868), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 160/174 (91%), Positives = 168/174 (96%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGLAYHFETEIR ILH+IYNSN DY WRKENLYATSLEFRLLRQHGYPVSQ+VFNGFKDD
Sbjct: 114 LGLAYHFETEIRNILHDIYNSNNDYVWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDD 173

Query: 61  KGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAK 120
           +GGFIC+DFK ++SLHEASY+S EGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAK
Sbjct: 174 QGGFICDDFKGVLSLHEASYFSLEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAK 233

Query: 121 RALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
           R LELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAK+EFNVLQAIYQEELKD
Sbjct: 234 RGLELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKLEFNVLQAIYQEELKD 287

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21435708|gb|AAM53946.1|AF514289_1 (+)-limonene synthase 2 [Citrus limon]

 Score =  323 bits (829), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 157/175 (89%), Positives = 164/175 (93%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGLAY FETEIR ILHNIYN+NKDY WRKENLYATSLEFRLLRQHGYPVSQ+VFNGFKDD
Sbjct: 114 LGLAYRFETEIRNILHNIYNNNKDYVWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDD 173

Query: 61  KGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAK 120
           +GGFI +DFK I+SLHEASYYS EGESIMEEAWQFTSKHLKEVMISKS + DVFVAEQAK
Sbjct: 174 QGGFIFDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMISKSMEEDVFVAEQAK 233

Query: 121 RALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           RALELPLHWKVPMLEARWFI VYEKREDKNHLLLELAKMEFN LQAIYQEELK+ 
Sbjct: 234 RALELPLHWKVPMLEARWFIHVYEKREDKNHLLLELAKMEFNTLQAIYQEELKEI 288

Source: Citrus limon

Species: Citrus limon

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|209446863|dbj|BAG74774.1| limonene synthase [Poncirus trifoliata]

 Score =  316 bits (810), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 155/175 (88%), Positives = 163/175 (93%), Gaps = 1/175 (0%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGLAYHFETEIR ILHNIYN+NKDY WRKENLYATSLEFRLLRQHGYPVSQ+V  GFK+D
Sbjct: 114 LGLAYHFETEIRNILHNIYNNNKDYIWRKENLYATSLEFRLLRQHGYPVSQEVSTGFKED 173

Query: 61  KGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVM-ISKSKQGDVFVAEQA 119
           KG FIC+DF  I+SLHEASYYS EGESIMEEAWQFTSKHLKE+M IS SK+ DVFVAEQA
Sbjct: 174 KGVFICDDFMGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMIISNSKEEDVFVAEQA 233

Query: 120 KRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
           KRALELPLHWKVPMLEARWFI VYEKREDKNHLLLELAK+EFNVLQAIYQEELKD
Sbjct: 234 KRALELPLHWKVPMLEARWFIHVYEKREDKNHLLLELAKLEFNVLQAIYQEELKD 288

Source: Poncirus trifoliata

Species: Citrus trifoliata

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|49659437|dbj|BAD27257.1| d-limonene synthase [Citrus unshiu]

 Score =  313 bits (801), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 155/177 (87%), Positives = 163/177 (92%), Gaps = 2/177 (1%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGLAYHFE EIR IL NI+N NKDYNWRKENLYATSLEFRLLRQHGYPVSQ+VF+GFKDD
Sbjct: 114 LGLAYHFEPEIRNILRNIHNHNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFSGFKDD 173

Query: 61  KGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMI-SKSKQGDVFVAEQA 119
           K GFIC+DFK I+SLHEASYYS EGESIMEEAWQFTSKHLKE+MI S SK+ DVFVAEQA
Sbjct: 174 KVGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEMMITSNSKEEDVFVAEQA 233

Query: 120 KRALELPLHW-KVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           KRALELPLHW KVPMLEARWFI VYEKREDKNHLLLELAK+EFN LQAIYQEELKD 
Sbjct: 234 KRALELPLHWKKVPMLEARWFIHVYEKREDKNHLLLELAKLEFNTLQAIYQEELKDI 290

Source: Citrus unshiu

Species: Citrus unshiu

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|41017756|sp|Q8L5K3.1|RLC1_CITLI RecName: Full=(R)-limonene synthase 1; AltName: Full=(+)-limonene synthase 1 gi|21435703|gb|AAM53944.1|AF514287_1 (+)-limonene synthase 1 [Citrus limon] gi|152962684|dbj|BAF73932.1| limonene synthase [Citrus jambhiri]

 Score =  301 bits (770), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 154/175 (88%), Positives = 166/175 (94%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGLA+ FETEIR IL+NIYN+NKDYNWRKENLYATSLEFRLLRQHGYPVSQ+VFNGFKDD
Sbjct: 114 LGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGFKDD 173

Query: 61  KGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAK 120
           +GGFIC+DFK I+SLHEASYYS EGESIMEEAWQFTSKHLKEVMISK+ + DVFVAEQAK
Sbjct: 174 QGGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMISKNMEEDVFVAEQAK 233

Query: 121 RALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           RALELPLHWKVPMLEARWFI +YE+REDKNHLLLELAKMEFN LQAIYQEELK+ 
Sbjct: 234 RALELPLHWKVPMLEARWFIHIYERREDKNHLLLELAKMEFNTLQAIYQEELKEI 288

Source: Citrus limon

Species: Citrus limon

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|394556815|dbj|BAM29049.1| geraniol synthase [Citrus jambhiri]

 Score =  298 bits (764), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 155/175 (88%), Positives = 164/175 (93%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGLA+ FETEIR IL+NIYN+NKDYNWRKENLYATSLEFRLLRQHGYPVSQ+VFNG KD 
Sbjct: 114 LGLAHRFETEIRNILNNIYNNNKDYNWRKENLYATSLEFRLLRQHGYPVSQEVFNGLKDG 173

Query: 61  KGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAK 120
           +GGFIC+DFK I+SLHEASYYS EGESIMEEAWQFTSKHLKEVMISKSK+  VFVAEQAK
Sbjct: 174 QGGFICDDFKGILSLHEASYYSLEGESIMEEAWQFTSKHLKEVMISKSKEEHVFVAEQAK 233

Query: 121 RALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           RALELPLHWKVPMLEARWFI VYEKREDKNHLLLELAK+EFN LQAIYQEELKD 
Sbjct: 234 RALELPLHWKVPMLEARWFIHVYEKREDKNHLLLELAKLEFNTLQAIYQEELKDI 288

Source: Citrus jambhiri

Species: Citrus jambhiri

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|322424201|gb|ADX01382.1| limonene synthase [Murraya paniculata]

 Score =  265 bits (678), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 128/175 (73%), Positives = 149/175 (85%), Gaps = 3/175 (1%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGLAYHFETEI+ ILHN+YN+  D  W+KENLYATSLEFRLLRQHGY VSQ+VF+ FKD 
Sbjct: 118 LGLAYHFETEIKNILHNVYNNKYD-KWKKENLYATSLEFRLLRQHGYNVSQEVFSSFKDK 176

Query: 61  KGGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAK 120
            GGFICNDFK I+SL+EA Y S EGE+IMEEAWQFTSKHLKE +   S + D  + EQA+
Sbjct: 177 NGGFICNDFKGILSLYEALYSSLEGENIMEEAWQFTSKHLKECL--NSNKDDEDLNEQAR 234

Query: 121 RALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           RAL+LPLHW++P LEARWFIDVYEKR+D+NH LLELAK++FN+LQA YQEELKD 
Sbjct: 235 RALQLPLHWRLPRLEARWFIDVYEKRKDRNHALLELAKLDFNILQATYQEELKDI 289

Source: Murraya paniculata

Species: Murraya paniculata

Genus: Murraya

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|45934586|gb|AAS79352.1| (-)-a-terpineol synthase [Vitis vinifera]

 Score =  196 bits (497), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 97/177 (54%), Positives = 131/177 (74%), Gaps = 7/177 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNS-NKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKD 59
           LG+ YHF+ EI++IL++IYN  N+   W+K++LYAT+LEFRLLRQHGY V QDVF+ FKD
Sbjct: 110 LGIYYHFKDEIKRILNSIYNQYNRHEEWQKDDLYATALEFRLLRQHGYDVPQDVFSRFKD 169

Query: 60  DKGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVA 116
           D G F   +C D K ++ L+EASY   +GES ME+A  F  +HL + +     Q    +A
Sbjct: 170 DTGSFKACLCEDMKGMLCLYEASYLCVQGESTMEQARDFAHRHLGKGLEQNIDQN---LA 226

Query: 117 EQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
            + K ALELPLHW++P LEARWFIDVYEKR+D N +LLE AK++FN++QA +QE+L+
Sbjct: 227 IEVKHALELPLHWRMPRLEARWFIDVYEKRQDMNPILLEFAKLDFNMVQATHQEDLR 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|75223392|sp|Q6PWU2.1|ATESY_VITVI RecName: Full=(-)-alpha-terpineol synthase gi|45934584|gb|AAS79351.1| (-)-a-terpineol synthase [Vitis vinifera]

 Score =  195 bits (496), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 97/177 (54%), Positives = 130/177 (73%), Gaps = 7/177 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNS-NKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKD 59
           LG+ YHF+ EI++IL+ IYN  N+   W+K++LYAT+LEFRLLRQHGY V QDVF+ FKD
Sbjct: 110 LGIYYHFKDEIKRILNGIYNQYNRHEEWQKDDLYATALEFRLLRQHGYDVPQDVFSRFKD 169

Query: 60  DKGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVA 116
           D G F   +C D K ++ L+EASY   +GES ME+A  F  +HL + +     Q    +A
Sbjct: 170 DTGSFKACLCEDMKGMLCLYEASYLCVQGESTMEQARDFAHRHLGKGLEQNIDQN---LA 226

Query: 117 EQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
            + K ALELPLHW++P LEARWFIDVYEKR+D N +LLE AK++FN++QA +QE+L+
Sbjct: 227 IEVKHALELPLHWRMPRLEARWFIDVYEKRQDMNPILLEFAKLDFNMVQATHQEDLR 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359494919|ref|XP_002267461.2| PREDICTED: myrcene synthase, chloroplastic-like [Vitis vinifera]

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 96/177 (54%), Positives = 129/177 (72%), Gaps = 7/177 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNS-NKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKD 59
           LGL YHF+ EI++IL  IYN  N+   W+K++LYAT+LEFRLLRQHGY V QDVF+ FKD
Sbjct: 110 LGLYYHFKDEIKRILDIIYNQYNQHEEWKKDDLYATALEFRLLRQHGYDVPQDVFSRFKD 169

Query: 60  DKGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVA 116
           + G F   +C D K ++ L+EASY   +GES ME+A  F  +HL + +   + Q    +A
Sbjct: 170 ETGSFKACLCEDMKGMLCLYEASYLCVQGESTMEQARDFAHRHLGKGLEQNTDQN---LA 226

Query: 117 EQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
            +   ALELPLHW++P LEARWFIDVYEKR+D N +LLE AK++FN++QA +QE+L+
Sbjct: 227 IEVNHALELPLHWRLPRLEARWFIDVYEKRQDMNPILLEFAKLDFNMVQATHQEDLR 283

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
UNIPROTKB|J7LQ09	542	J7LQ09 "Trans-alpha-bergamoten	0.971	0.313	0.505	1.4e-41
UNIPROTKB|J7LH11	546	J7LH11 "(+)-epi-alpha-bisabolo	0.977	0.313	0.486	4.6e-41
UNIPROTKB|B3TPQ7	592	B3TPQ7 "Alpha-terpineol syntha	0.954	0.282	0.488	3.7e-39
UNIPROTKB|Q50L36	595	ISPS "Isoprene synthase, chlor	0.977	0.287	0.480	9.2e-38
UNIPROTKB|Q9SPN0	567	QH1 "R-linalool synthase QH1,	0.965	0.298	0.460	1.5e-37
UNIPROTKB|Q8GUE4	603	GerS "Geraniol synthase, chlor	0.96	0.278	0.443	1.6e-36
UNIPROTKB|B5A434	576	B5A434 "(+)-alpha-terpineol sy	0.96	0.291	0.462	6.4e-36
UNIPROTKB|Q5UB07	580	TPS4 "Tricyclene synthase TPS4	0.971	0.293	0.458	2e-35
UNIPROTKB|Q8L5K4	600	Q8L5K4 "Gamma-terpinene syntha	0.948	0.276	0.453	1e-34
UNIPROTKB|Q8H2B4	606	Q8H2B4 "R-linalool synthase, c	0.982	0.283	0.444	5.1e-34

UNIPROTKB|J7LQ09 J7LQ09 "Trans-alpha-bergamotene synthase" [Phyla dulcis (taxid:542674)]

 Score = 441 (160.3 bits), Expect = 1.4e-41, P = 1.4e-41
 Identities = 90/178 (50%), Positives = 128/178 (71%)

Query:     1 LGLAYHFETEIRKILHNIYNSNK----DYNWRKENLYATSLEFRLLRQHGYPVSQDVFNG 56
             LG+++HF  EI+++L NIY   +    D    +++LY+TSL+FRLLRQHGY VSQDVF  
Sbjct:    65 LGISHHFRDEIQRVLQNIYEKMRVECPDRMLMEKDLYSTSLQFRLLRQHGYHVSQDVFCS 124

Query:    57 FKDDKGGF-ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFV 115
             F D  G F   +D K I++L+EAS+ S EGE+I+  A  F+++HLK+ +    +  D  +
Sbjct:   125 FMDGAGNFQAVDDLKGILALYEASFLSREGENILGSARDFSTRHLKQKL---EEITDPIL 181

Query:   116 AEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
             AE+ +RALELPLHW++  LEA WFI++YE R D N +LL+LAK+EFN++QA YQE+LK
Sbjct:   182 AEKIRRALELPLHWRLQKLEAIWFINIYESRFDANLILLQLAKLEFNMVQAQYQEDLK 239

GO:0010334 "sesquiterpene synthase activity" evidence=IDA

GO:0045339 "farnesyl diphosphate catabolic process" evidence=IDA

GO:1901940 "(-)-exo-alpha-bergamotene biosynthetic process" evidence=IDA

UNIPROTKB|J7LH11 J7LH11 "(+)-epi-alpha-bisabolol synthase" [Phyla dulcis (taxid:542674)]

 Score = 436 (158.5 bits), Expect = 4.6e-41, P = 4.6e-41
 Identities = 87/179 (48%), Positives = 121/179 (67%)

Query:     1 LGLAYHFETEIRKILHNIYNSNKD-YNWRK-ENLYATSLEFRLLRQHGYPVSQDVFNGFK 58
             L ++YHF   I + L NIY+   D   W   +NL+AT+L FRLLRQHGY VS +VF  F 
Sbjct:    67 LAISYHFTEYIDRNLKNIYDILIDGRRWNHADNLHATTLSFRLLRQHGYQVSPEVFRNFM 126

Query:    59 DDKGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFV 115
             D+ G F   +C+D K ++SL+EASY   EGE+IM+ A  F + HLK+ +     +    +
Sbjct:   127 DETGNFKKNLCDDIKGLLSLYEASYLLTEGETIMDSAQAFATHHLKQKLEENMNKN---L 183

Query:   116 AEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
              ++   ALELPLHW+VP L+ RW ID YE+R+D N LLLELAK++FN+ Q++YQ+ELK+
Sbjct:   184 GDEIAHALELPLHWRVPKLDVRWSIDAYERRQDMNPLLLELAKLDFNIAQSMYQDELKE 242

GO:0010334 "sesquiterpene synthase activity" evidence=IDA

GO:0045339 "farnesyl diphosphate catabolic process" evidence=IDA

GO:1901943 "(+)-epi-alpha-bisabolol biosynthetic process" evidence=IDA

UNIPROTKB|B3TPQ7 B3TPQ7 "Alpha-terpineol synthase, chloroplastic" [Magnolia grandiflora (taxid:3406)]

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 87/178 (48%), Positives = 119/178 (66%)

Query:     1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
             LG+ YHF+ EI++IL  I     +      +LYA +L FRLLRQHGY V Q VFN F DD
Sbjct:   115 LGVGYHFDKEIKEILKTISTEPNNMGLIDGDLYAMALYFRLLRQHGYEVPQGVFNRFMDD 174

Query:    61 KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVM--ISKSKQGDVFV 115
                F   +CND K ++SL+EASY + EGE+ ++EA  FT +HL+ +   I  + +G V  
Sbjct:   175 SSSFKASLCNDVKGMLSLYEASYLALEGETTLDEAKAFTYRHLRGLKGNIDSNLKGLV-- 232

Query:   116 AEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
                 + ALELPLHW+V  LEARW+ID YE+ ED N LLLELAK++FN++Q +YQ +++
Sbjct:   233 ----EHALELPLHWRVLRLEARWYIDTYERMEDMNPLLLELAKLDFNIVQNVYQGQVR 286

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0010333 "terpene synthase activity" evidence=IDA

GO:0033383 "geranyl diphosphate metabolic process" evidence=IDA

GO:0043693 "monoterpene biosynthetic process" evidence=IDA

UNIPROTKB|Q50L36 ISPS "Isoprene synthase, chloroplastic" [Populus alba (taxid:43335)]

 Score = 406 (148.0 bits), Expect = 9.2e-38, P = 9.2e-38
 Identities = 85/177 (48%), Positives = 119/177 (67%)

Query:     1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
             LGL Y FE++IR  L    +S       K +L+ T+L FRLLRQHG+ VSQ+ F+GFKD 
Sbjct:   117 LGLGYRFESDIRGALDRFVSSGGFDAVTKTSLHGTALSFRLLRQHGFEVSQEAFSGFKDQ 176

Query:    61 KGGFICN---DFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
              G F+ N   D K I+SL+EAS+ + EGE+I++EA  F   HLKE  +S+ K G   +AE
Sbjct:   177 NGNFLENLKEDIKAILSLYEASFLALEGENILDEAKVFAISHLKE--LSEEKIGKE-LAE 233

Query:   118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
             Q   ALELPLH +   LEA W I+ Y K+ED N +LLELA +++N++Q++YQ +L++
Sbjct:   234 QVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRE 290

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0009408 "response to heat" evidence=IEP

GO:0009409 "response to cold" evidence=IEP

GO:0009507 "chloroplast" evidence=IDA

GO:0034009 "isoprene synthase activity" evidence=IDA

GO:0043612 "isoprene biosynthetic process" evidence=IDA

GO:0050993 "dimethylallyl diphosphate metabolic process" evidence=IDA

GO:0071482 "cellular response to light stimulus" evidence=IEP

GO:0071485 "cellular response to absence of light" evidence=IEP

UNIPROTKB|Q9SPN0 QH1 "R-linalool synthase QH1, chloroplastic" [Artemisia annua (taxid:35608)]

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 82/178 (46%), Positives = 120/178 (67%)

Query:     1 LGLAYHFETEIRKILHNIYNSNKDY--NWRKENLYATSLEFRLLRQHGYPVSQDVFNGFK 58
             LG++Y FE EI  +L  IY +   +  NW K NL   +L FRLLRQHGY V Q++F  FK
Sbjct:    90 LGISYLFEEEISNLLETIYYNYYKFPENWNKINLNLKALGFRLLRQHGYHVPQEIFLNFK 149

Query:    59 DDK---GGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFV 115
             D       ++ ND  E+++L+EASY+SFE ESI+++A   T+K+LKE +  +   G +F 
Sbjct:   150 DKNQNLNSYLLNDVVEMLNLYEASYHSFEDESILDDARDITTKYLKESL--EKIDGSIF- 206

Query:   116 AEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
                   ALE PLHW+VP +EA+WFI++YEK+   +  L+ELAK++F+++QAI+ E+LK
Sbjct:   207 -SSVTHALEQPLHWRVPRVEAKWFIELYEKKNGMSPTLVELAKLDFDMVQAIHLEDLK 263

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0033383 "geranyl diphosphate metabolic process" evidence=IDA

GO:0034008 "R-linalool synthase activity" evidence=IDA

UNIPROTKB|Q8GUE4 GerS "Geraniol synthase, chloroplastic" [Cinnamomum tenuipile (taxid:192326)]

 Score = 396 (144.5 bits), Expect = 1.6e-36, P = 1.6e-36
 Identities = 78/176 (44%), Positives = 118/176 (67%)

Query:     1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
             LGL + F+ EI+++L+ I + N     RK+ L+A S  FRLLRQHGY VS DVFN FKD+
Sbjct:   112 LGLRWLFKNEIKQVLYTISSDNTSIEMRKD-LHAVSTRFRLLRQHGYKVSTDVFNDFKDE 170

Query:    61 KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
             KG F   +  D K ++SL+EAS+ +F+GE++++EA  F S HL ++     +  D  + +
Sbjct:   171 KGCFKPSLSMDIKGMLSLYEASHLAFQGETVLDEARAFVSTHLMDI----KENIDPILHK 226

Query:   118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
             + + AL++PLHW++  LEARW++D+Y + E  N  LLELA + FN++Q  +Q  LK
Sbjct:   227 KVEHALDMPLHWRLEKLEARWYMDIYMREEGMNSSLLELAMLHFNIVQTTFQTNLK 282

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0016787 "hydrolase activity" evidence=IDA

GO:0030145 "manganese ion binding" evidence=IDA

GO:0033383 "geranyl diphosphate metabolic process" evidence=IDA

GO:0042803 "protein homodimerization activity" evidence=ISS

UNIPROTKB|B5A434 B5A434 "(+)-alpha-terpineol synthase" [Santalum album (taxid:35974)]

 Score = 389 (142.0 bits), Expect = 6.4e-36, P = 6.4e-36
 Identities = 81/175 (46%), Positives = 114/175 (65%)

Query:     1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
             LGL Y FE+EI++ L ++Y    D  W  +NL+AT+L FRLLR++G  V QDVF   KD 
Sbjct:    97 LGLKYRFESEIKEELFSLYKDGTDA-WWVDNLHATALRFRLLRENGIFVPQDVFETLKDK 155

Query:    61 KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
              G F   +C D + ++SL+EASY  +EGE +++EA +F++ +L  V  S S      +  
Sbjct:   156 SGKFKSQLCKDVRGLLSLYEASYLGWEGEDLLDEAKKFSTTNLNNVKESISSNT---LGR 212

Query:   118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
               K AL LPLHW     EARWFID YEK E+ N  LL+ AK++FN++Q+I+Q+EL
Sbjct:   213 LVKHALNLPLHWSAARYEARWFIDEYEKEENVNPNLLKYAKLDFNIVQSIHQQEL 267

GO:0010333 "terpene synthase activity" evidence=IDA

GO:0033383 "geranyl diphosphate metabolic process" evidence=IDA

UNIPROTKB|Q5UB07 TPS4 "Tricyclene synthase TPS4, chloroplastic" [Medicago truncatula (taxid:3880)]

 Score = 385 (140.6 bits), Expect = 2.0e-35, P = 2.0e-35
 Identities = 82/179 (45%), Positives = 117/179 (65%)

Query:     1 LGLAYHFETEIRKILHNIYNSNK--DYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFK 58
             LGL+YHFE EI + L    +  K    N    +L+ T+L FRLLR++GY +S D+F  FK
Sbjct:   104 LGLSYHFEEEIGEALDRFLSLEKCSGRNNFGRSLHETALRFRLLREYGYDISPDIFEKFK 163

Query:    59 DDKGGF-IC--NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFV 115
             D  G F  C   D K ++SL++AS+ S+EGE I++EA  FTS HLK++   +S      +
Sbjct:   164 DHNGNFKACLVQDIKGMLSLYDASFLSYEGEQILDEANAFTSIHLKDLSEGRSS----IL 219

Query:   116 AEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
              +Q   +LELPL+ +V  LEARWFID YE R+D N +LLE AK+ FN++Q+  Q++LK+
Sbjct:   220 IDQVNHSLELPLYRRVQSLEARWFIDSYENRKDANKVLLEAAKLNFNIVQSTLQQDLKE 278

GO:0008152 "metabolic process" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009611 "response to wounding" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0010333 "terpene synthase activity" evidence=IDA

GO:0080027 "response to herbivore" evidence=IEP

UNIPROTKB|Q8L5K4 Q8L5K4 "Gamma-terpinene synthase, chloroplastic" [Citrus limon (taxid:2708)]

 Score = 380 (138.8 bits), Expect = 1.0e-34, P = 1.0e-34
 Identities = 83/183 (45%), Positives = 126/183 (68%)

Query:     1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGY--PVSQDVFNGFK 58
             LG++YHFE EI++ L  I+N N +     ++LYA +L+FR+LRQ+GY  PV ++ F+ F 
Sbjct:   122 LGVSYHFEDEIKRTLDRIHNKNTN-----KSLYARALKFRILRQYGYKTPV-KETFSRFM 175

Query:    59 DDKGGFICN----DFKEIMSLHEASYYSFEGES-IMEEAWQFTSKHLKEVMISK---SKQ 110
             D+KG F  +    + K +++L+EA+Y   E ES I  +A +FT+ +LKE  ++K    K 
Sbjct:   176 DEKGSFKLSSHSDECKGMLALYEAAYLLVEEESSIFRDAIRFTTAYLKE-WVAKHDIDKN 234

Query:   111 GDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQE 170
              + ++    K ALELPLHW++  LEARWFIDVYE   D N +LLELAK+++N++QA++QE
Sbjct:   235 DNEYLCTLVKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAVHQE 294

Query:   171 ELK 173
             +LK
Sbjct:   295 DLK 297

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0010333 "terpene synthase activity" evidence=IDA

GO:0033383 "geranyl diphosphate metabolic process" evidence=IDA

UNIPROTKB|Q8H2B4 Q8H2B4 "R-linalool synthase, chloroplastic" [Mentha aquatica (taxid:190902)]

 Score = 374 (136.7 bits), Expect = 5.1e-34, P = 5.1e-34
 Identities = 80/180 (44%), Positives = 118/180 (65%)

Query:     1 LGLAYHFETEIRKILHNIYNSNKDYNWRKE-NLYATSLEFRLLRQHGYPVSQDVFNGFKD 59
             LGL+Y F  EI+ IL++IY   ++ N  K  +L+ TSL FRLLRQHG+ VSQ VF+ FK+
Sbjct:   131 LGLSYFFRDEIKNILNSIYKIFQNNNSTKVGDLHFTSLGFRLLRQHGFNVSQGVFDCFKN 190

Query:    60 DKGG-----FICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVF 114
             + G       I  D K ++ L+EAS+   EGE  +E A +F+++ L+E  +     GD  
Sbjct:   191 EHGSDFEKTLIGEDTKGVLQLYEASFLLREGEDTLEVARKFSTEFLEE-KLKAGIDGDN- 248

Query:   115 VAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
             ++     +LE+PLHW++  LE RWF+D Y +R+D N ++ ELAK++FN++QA  QEELKD
Sbjct:   249 LSSSIGHSLEIPLHWRIQRLEERWFLDAYSRRKDMNPIIFELAKLDFNIIQATQQEELKD 308

GO:0000287 "magnesium ion binding" evidence=IDA

GO:0030145 "manganese ion binding" evidence=IDA

GO:0033383 "geranyl diphosphate metabolic process" evidence=IDA

GO:0034008 "R-linalool synthase activity" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	175
cd00684	542	cd00684, Terpene_cyclase_plant_C1, Plant Terpene C	7e-76
pfam01397	177	pfam01397, Terpene_synth, Terpene synthase, N-term	4e-51
PLN02592	800	PLN02592, PLN02592, ent-copalyl diphosphate syntha	2e-21
PLN02279	784	PLN02279, PLN02279, ent-kaur-16-ene synthase	1e-14
pfam03936	270	pfam03936, Terpene_synth_C, Terpene synthase famil	0.004

>gnl|CDD|173832 cd00684, Terpene_cyclase_plant_C1, Plant Terpene Cyclases, Class 1

 Score =  235 bits (603), Expect = 7e-76
 Identities = 89/179 (49%), Positives = 124/179 (69%), Gaps = 5/179 (2%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDY-NWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKD 59
           LG++YHFE EI++IL  IY    +     +++LY T+L FRLLRQHGY VS DVF  FKD
Sbjct: 66  LGISYHFEDEIKEILDYIYRYWTERGESNEDDLYTTALGFRLLRQHGYNVSSDVFKKFKD 125

Query: 60  DKGGFIC---NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVA 116
           + G F      D K ++SL+EAS+ SF GE I++EA  FT+KHL+E +   +   D  ++
Sbjct: 126 EDGKFKESLTQDVKGMLSLYEASHLSFPGEDILDEALSFTTKHLEEKL-ESNWIIDPDLS 184

Query: 117 EQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
            + + ALE+PLH  +P LEARW+I+ YE+ +D N  LLELAK++FN+LQA++QEELK  
Sbjct: 185 GEIEYALEIPLHASLPRLEARWYIEFYEQEDDHNETLLELAKLDFNILQALHQEELKIL 243

This CD includes a diverse group of monomeric plant terpene cyclases (Tspa-Tspf) that convert the acyclic isoprenoid diphosphates, geranyl diphosphate (GPP), farnesyl diphosphate (FPP), or geranylgeranyl diphosphate (GGPP) into cyclic monoterpenes, diterpenes, or sesquiterpenes, respectively; a few form acyclic species. Terpnoid cyclases are soluble enzymes localized to the cytosol (sesquiterpene synthases) or plastids (mono- and diterpene synthases). All monoterpene and diterpene synthases have restrict substrate specificity, however, some sesquiterpene synthases can accept both FPP and GPP. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions located on opposite walls. These residues mediate binding of prenyl diphosphates, via bridging Mg2+ ions (K+ preferred by gymnosperm cyclases), inducing conformational changes such that an N-terminal region forms a cap over the catalytic core. Loss of diphosphate from the enzyme-bound substrate (GPP, FPP, or GGPP) results in an allylic carbocation that electrophilically attacks a double bond further down the terpene chain to effect the first ring closure. Unlike monoterpene, sesquiterene, and macrocyclic diterpenes synthases, which undergo substrate ionization by diphosphate ester scission, Tpsc-like diterpene synthases catalyze cyclization reactions by an initial protonation step producing a copalyl diphosphate intermediate. These enzymes lack the aspartate-rich sequences mentioned above. Most diterpene synthases have an N-terminal, internal element (approx 210 aa) whose function is unknown. Length = 542

>gnl|CDD|216477 pfam01397, Terpene_synth, Terpene synthase, N-terminal domain

 Score =  161 bits (410), Expect = 4e-51
 Identities = 59/126 (46%), Positives = 84/126 (66%), Gaps = 5/126 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI++IL  IY +  D +  +++LY T+L FRLLRQHGY VS DVFN FKD+
Sbjct: 54  LGISYHFEKEIKEILDQIYRNWDDNDEEEDDLYTTALAFRLLRQHGYDVSSDVFNKFKDE 113

Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + ND K ++SL+EAS+    GE I++EA  FT+KHL+   +  S      +A+
Sbjct: 114 DGKFKESLTNDVKGLLSLYEASHLRTHGEDILDEALSFTTKHLES--LLSSLSSPDNLAK 171

Query: 118 QAKRAL 123
           + + AL
Sbjct: 172 EVEHAL 177

It has been suggested that this gene family be designated tps (for terpene synthase). It has been split into six subgroups on the basis of phylogeny, called tpsa-tpsf. tpsa includes vetispiridiene synthase, 5-epi- aristolochene synthase, and (+)-delta-cadinene synthase. tpsb includes (-)-limonene synthase. tpsc includes kaurene synthase A. tpsd includes taxadiene synthase, pinene synthase, and myrcene synthase. tpse includes kaurene synthase B. tpsf includes linalool synthase. Length = 177

>gnl|CDD|215321 PLN02592, PLN02592, ent-copalyl diphosphate synthase

 Score = 89.9 bits (223), Expect = 2e-21
 Identities = 66/211 (31%), Positives = 105/211 (49%), Gaps = 44/211 (20%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKD------YNWRKENLYATSLEFRLLRQHGYPVSQDVF 54
           LG++ +FE EI++ +  ++    +       N    ++  T++ FRLLR HG+ VS DVF
Sbjct: 323 LGISRYFEPEIKECIDYVHRYWTENGICWARNSHVHDIDDTAMGFRLLRLHGHQVSADVF 382

Query: 55  NGFKDDKGG-FIC------NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEV---- 103
             F+  KGG F C           + +L+ AS   F GE I+E A +F+SK L+E     
Sbjct: 383 KHFE--KGGEFFCFAGQSTQAVTGMFNLYRASQVLFPGEKILENAKEFSSKFLREKQEAN 440

Query: 104 ------MISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKRED--------- 148
                 +I K   G+V        ALE+P +  +P +E R++I+ Y   +D         
Sbjct: 441 ELLDKWIIMKDLPGEV------GFALEIPWYASLPRVETRFYIEQYGGEDDVWIGKTLYR 494

Query: 149 ----KNHLLLELAKMEFNVLQAIYQEELKDF 175
                N+  LELAK+++N  QA++Q E  +F
Sbjct: 495 MPYVNNNEYLELAKLDYNNCQALHQLEWDNF 525

Length = 800

>gnl|CDD|177918 PLN02279, PLN02279, ent-kaur-16-ene synthase

 Score = 70.3 bits (172), Expect = 1e-14
 Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 32/199 (16%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNW--RKENLYA----TSLEFRLLRQHGYPVSQDVF 54
           LG+  HF  EI+ +L   Y       W   +E ++      +L FR+LR +GY VS D  
Sbjct: 283 LGIDRHFRKEIKSVLDETYRY-----WLQGEEEIFLDLATCALAFRILRLNGYDVSSDPL 337

Query: 55  NGFKDDK-----GGFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSK 109
             F +D      GG++  D   ++ L  AS  S+  ES++E+   +TS  L++ + + SK
Sbjct: 338 KQFAEDHFSDSLGGYL-KDTGAVLELFRASQISYPDESLLEKQNSWTSHFLEQGLSNWSK 396

Query: 110 QGD---VFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDK------------NHLLL 154
             D    ++ ++ + AL  P +  +  L  R  I+ Y   + +            N   L
Sbjct: 397 TADRLRKYIKKEVEDALNFPYYANLERLANRRSIENYAVDDTRILKTSYRCSNICNQDFL 456

Query: 155 ELAKMEFNVLQAIYQEELK 173
           +LA  +FN  Q+I++EELK
Sbjct: 457 KLAVEDFNFCQSIHREELK 475

Length = 784

>gnl|CDD|202816 pfam03936, Terpene_synth_C, Terpene synthase family, metal binding domain

 Score = 36.2 bits (84), Expect = 0.004
 Identities = 15/23 (65%), Positives = 22/23 (95%)

Query: 153 LLELAKMEFNVLQAIYQEELKDF 175
           LLELAK++FN+LQA++Q+ELK+ 
Sbjct: 1   LLELAKLDFNLLQALHQQELKEL 23

It has been suggested that this gene family be designated tps (for terpene synthase). It has been split into six subgroups on the basis of phylogeny, called tpsa-tpsf. tpsa includes vetispiridiene synthase, 5-epi- aristolochene synthase, and (+)-delta-cadinene synthase. tpsb includes (-)-limonene synthase. tpsc includes kaurene synthase A. tpsd includes taxadiene synthase, pinene synthase, and myrcene synthase. tpse includes kaurene synthase B. tpsf includes linalool synthase. Length = 270

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
cd00684	542	Terpene_cyclase_plant_C1 Plant Terpene Cyclases, C	100.0
PLN02279	784	ent-kaur-16-ene synthase	100.0
PLN02592	800	ent-copalyl diphosphate synthase	100.0
PF01397	183	Terpene_synth: Terpene synthase, N-terminal domain	100.0

>cd00684 Terpene_cyclase_plant_C1 Plant Terpene Cyclases, Class 1

Probab=100.00  E-value=2.8e-67  Score=482.33  Aligned_cols=173  Identities=52%  Similarity=0.843  Sum_probs=160.9

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCcc-cccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc---cccchHHHHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDYN-WRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKEIMSLH   76 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~~-~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F---~~~d~~glL~LY   76 (175)
                      |||+|||++||+++|++||+.+.... ....||++|||+|||||||||+||||||++|+|++|+|   +.+||+||||||
T Consensus        66 LGi~~hF~~EI~~~L~~i~~~~~~~~~~~~~dl~~~al~FRlLR~~Gy~vs~dvf~~F~~~~g~f~~~~~~d~~g~l~Ly  145 (542)
T cd00684          66 LGISYHFEDEIKEILDYIYRYWTERGESNEDDLYTTALGFRLLRQHGYNVSSDVFKKFKDEDGKFKESLTQDVKGMLSLY  145 (542)
T ss_pred             cCchhhhHHHHHHHHHHHHHhhcccccccCCCHHHHHHHHHHHHHcCCCcCHHHHhhhcCCCCCcCchhhhhhHHHHHHH
Confidence            89999999999999999998653321 22579999999999999999999999999999999999   789999999999


Q ss_pred             HhhcCCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccCcccHHHHH
Q 046807           77 EASYYSFEGESIMEEAWQFTSKHLKEVMISK-SKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLE  155 (175)
Q Consensus        77 eAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~-~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLe  155 (175)
                      ||||+++|||+|||||++||++||++++.++ .+  +++|+++|++||++||||++||+||||||++|++++++|++||+
T Consensus       146 ~As~l~~~gE~iLdeA~~ft~~~L~~~~~~~~~~--~~~l~~~V~~aL~~P~~~~~~rlear~yi~~Y~~~~~~n~~lLe  223 (542)
T cd00684         146 EASHLSFPGEDILDEALSFTTKHLEEKLESNWII--DPDLSGEIEYALEIPLHASLPRLEARWYIEFYEQEDDHNETLLE  223 (542)
T ss_pred             HHhhcCCCCcHHHHHHHHHHHHHHHHHhhccCCC--CchHHHHHHHHccCchhcCCchHHHHHHHHHhCCCccccHHHHH
Confidence            9999999999999999999999999999332 15  78999999999999999999999999999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHhhcC
Q 046807          156 LAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       156 lAklDFn~~Q~~hq~EL~~l  175 (175)
                      |||+|||+||++||+||+++
T Consensus       224 lAkldfn~~Q~~hq~El~~~  243 (542)
T cd00684         224 LAKLDFNILQALHQEELKIL  243 (542)
T ss_pred             HHHHHHHHHhHhHHHHHHHH
Confidence            99999999999999999874

This CD includes a diverse group of monomeric plant terpene cyclases (Tspa-Tspf) that convert the acyclic isoprenoid diphosphates, geranyl diphosphate (GPP), farnesyl diphosphate (FPP), or geranylgeranyl diphosphate (GGPP) into cyclic monoterpenes, diterpenes, or sesquiterpenes, respectively; a few form acyclic species. Terpnoid cyclases are soluble enzymes localized to the cytosol (sesquiterpene synthases) or plastids (mono- and diterpene synthases). All monoterpene and diterpene synthases have restrict substrate specificity, however, some sesquiterpene synthases can accept both FPP and GPP. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions located on opposite walls. These residues mediate binding of prenyl diphosphates, via bridging Mg2+ ions (K+ preferred by gymnosperm cyclases), inducing conformational changes such that an N-terminal regi

>PLN02279 ent-kaur-16-ene synthase

Probab=100.00  E-value=5.3e-59  Score=441.46  Aligned_cols=171  Identities=31%  Similarity=0.463  Sum_probs=155.8

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCC-cccccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc---c---ccchHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKD-YNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---I---CNDFKEIM   73 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~-~~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F---~---~~d~~glL   73 (175)
                      |||+|||++||+++|+.+|+.+.. ......|+++|||+|||||||||+||||||++|+|++  |   +   .+||+|||
T Consensus       283 lGi~~hF~~EI~~~L~~~~~~~~~~~~~~~~Dl~~tAl~FRLLR~hGy~VS~dvf~~F~~~~--F~~~l~~~~~dv~gmL  360 (784)
T PLN02279        283 LGIDRHFRKEIKSVLDETYRYWLQGEEEIFLDLATCALAFRILRLNGYDVSSDPLKQFAEDH--FSDSLGGYLKDTGAVL  360 (784)
T ss_pred             hCCccccHHHHHHHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHcCCCCChhHHhhcCCCc--ccchhcccchhhHHHH
Confidence            799999999999999999986532 1223579999999999999999999999999999765  7   4   58999999


Q ss_pred             HHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhcC-----CCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccCc
Q 046807           74 SLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKS-----KQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKRED  148 (175)
Q Consensus        74 ~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~-----~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~  148 (175)
                      |||||||+++|||.|||||+.||++||++.+.++.     +  +++|+++|++||++|||+++||+|||+||++|++++.
T Consensus       361 ~LY~AS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~~--~~~L~~eV~~AL~~P~~~~l~RlEaR~yI~~Y~~~~~  438 (784)
T PLN02279        361 ELFRASQISYPDESLLEKQNSWTSHFLEQGLSNWSKTADRL--RKYIKKEVEDALNFPYYANLERLANRRSIENYAVDDT  438 (784)
T ss_pred             HHHHHHhcCCCccHHHHHHHHHHHHHHHHHHhccccccccc--CccHHHHHHHHhcCchhcCccHHHHHHHHHHhccccc
Confidence            99999999999999999999999999999885432     4  6789999999999999999999999999999998875


Q ss_pred             ------------ccHHHHHHHHhhhHHHHHHHHHHhhcC
Q 046807          149 ------------KNHLLLELAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       149 ------------~n~~lLelAklDFn~~Q~~hq~EL~~l  175 (175)
                                  +|++||||||+|||+||++||+||+++
T Consensus       439 ~i~Kt~yr~~~~~n~~lLeLAklDFN~~Qs~hq~EL~~l  477 (784)
T PLN02279        439 RILKTSYRCSNICNQDFLKLAVEDFNFCQSIHREELKQL  477 (784)
T ss_pred             hhccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                        899999999999999999999999975

>PLN02592 ent-copalyl diphosphate synthase

Probab=100.00  E-value=4.1e-57  Score=428.26  Aligned_cols=174  Identities=33%  Similarity=0.476  Sum_probs=155.5

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCC--cc----cccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc------cccc
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKD--YN----WRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF------ICND   68 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~--~~----~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F------~~~d   68 (175)
                      |||+|||++||+++|+.+|+.+..  ..    ....|+++|||+|||||||||+||||||++|++ +|.|      ..+|
T Consensus       323 LGIs~hF~~EI~~iLd~iy~~w~~~g~~~a~~~~~~Dld~TALaFRLLRqhGy~VS~DvF~~F~~-~g~F~~~~ge~~~D  401 (800)
T PLN02592        323 LGISRYFEPEIKECIDYVHRYWTENGICWARNSHVHDIDDTAMGFRLLRLHGHQVSADVFKHFEK-GGEFFCFAGQSTQA  401 (800)
T ss_pred             cCCccccHHHHHHHHHHHHHHHhhcCcccccCCCcCCHHHHHHHHHHHHHcCCCCChHHHHhhcC-CCCccccccccccc
Confidence            799999999999999999985422  11    124799999999999999999999999999997 7999      2789


Q ss_pred             hHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCC----CChhHHHHHHHhcCCCccCCchHHHHHhhHHHhh
Q 046807           69 FKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQ----GDVFVAEQAKRALELPLHWKVPMLEARWFIDVYE  144 (175)
Q Consensus        69 ~~glL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~----~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~  144 (175)
                      ++|||+||||||+++|||.|||+|+.||+++|++.+..+++.    .+++|+++|+|||++||||+|||+||||||++|+
T Consensus       402 v~glL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~l~d~~~~~~~L~~eV~~AL~~P~~~~l~RlEaR~yI~~Y~  481 (800)
T PLN02592        402 VTGMFNLYRASQVLFPGEKILENAKEFSSKFLREKQEANELLDKWIIMKDLPGEVGFALEIPWYASLPRVETRFYIEQYG  481 (800)
T ss_pred             hHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHHHhhccccccccccCccHHHHHHHhccChhhcCcchHHHHHHHHHhc
Confidence            999999999999999999999999999999999987423221    1568999999999999999999999999999999


Q ss_pred             ccCcc-------------cHHHHHHHHhhhHHHHHHHHHHhhcC
Q 046807          145 KREDK-------------NHLLLELAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       145 ~~~~~-------------n~~lLelAklDFn~~Q~~hq~EL~~l  175 (175)
                      +++++             |+.||||||+|||+||++||+||+++
T Consensus       482 ~~~~~~i~Kt~yr~~~~~n~~lLeLAklDFn~~Qs~hq~EL~~l  525 (800)
T PLN02592        482 GEDDVWIGKTLYRMPYVNNNEYLELAKLDYNNCQALHQLEWDNF  525 (800)
T ss_pred             CCcccchhhhhccccccCCHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence            87764             99999999999999999999999875

>PF01397 Terpene_synth: Terpene synthase, N-terminal domain; InterPro: IPR001906 Sequences containing this domain belong to the terpene synthase family

Probab=100.00  E-value=1.1e-48  Score=316.64  Aligned_cols=122  Identities=53%  Similarity=0.839  Sum_probs=103.3

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCcccccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc---cccchHHHHHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKEIMSLHE   77 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F---~~~d~~glL~LYe   77 (175)
                      |||+|||++||+++|++||+.+........||++|||+|||||||||+||||||++|+|++|+|   +++||+|||+|||
T Consensus        59 LGi~yhFe~EI~~~L~~i~~~~~~~~~~~~dL~~~AL~FRLLRqhGy~VS~DvF~~F~d~~g~F~~~l~~Dv~glLsLYe  138 (183)
T PF01397_consen   59 LGISYHFEDEIKEILDSIYRSWDEDNEEIDDLYTTALRFRLLRQHGYYVSSDVFNKFKDEKGNFKESLSNDVKGLLSLYE  138 (183)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHTTTTTSHTSSCHHHHHHHHHHHHHTT----GGGGGGGBETTSSBSGGGGGHHHHHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHHHhhhccccccccCchhHHHHHHHHHHHcCCcccHHHHhCcccCCCccchhhhHhHHHHHHHHH
Confidence            8999999999999999999876544333459999999999999999999999999999999999   8899999999999


Q ss_pred             hhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHhc
Q 046807           78 ASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRAL  123 (175)
Q Consensus        78 AS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~~l~~~V~~aL  123 (175)
                      |||++++||+|||+|+.||+++|++++.+...+ +++|+++|+|||
T Consensus       139 AS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~-~~~L~~~V~~AL  183 (183)
T PF01397_consen  139 ASHLRFHGEDILDEARAFTTKHLKSLLSNLSIP-DPHLAKEVKHAL  183 (183)
T ss_dssp             HHTT--TT-HHHHHHHHHHHHHHHHHHTTTCTT-SCHHHHHHHHHH
T ss_pred             HHHccCCChHHHHHHHHHHHHHHHHHhccCCCC-cHHHHHHHHHhC
Confidence            999999999999999999999999999444332 346999999997

It has been suggested that this gene family be designated tps (for terpene synthase). Sequence comparisons reveal similarities between the monoterpene (C10) synthases, sesquiterpene (C15) synthases and the diterpene (C20) synthases. It has been split into six subgroups on the basis of phylogeny, called Tpsa-Tpsf []. Tpsa includes vetispiridiene synthase Q39979 from SWISSPROT, 5-epi- aristolochene synthase, Q40577 from SWISSPROT and (+)-delta-cadinene synthase P93665 from SWISSPROT . Tpsb includes (-)-limonene synthase, Q40322 from SWISSPROT. Tpsc includes copalyl diphosphate synthase (kaurene synthase A), O04408 from SWISSPROT. Tpsd includes taxadiene synthase, Q41594 from SWISSPROT, pinene synthase, O24475 from SWISSPROT and myrcene synthase, O24474 from SWISSPROT. Tpse includes ent-kaurene synthase B Q39548 from SWISSPROT. Tpsf includes linalool synthase Q9ZPN5 from SWISSPROT. In the fungus Phaeosphaeria sp. (strain L487) the synthesis of ent-kaurene from geranylgeranyl dophosphate is promoted by a single bifunctional protein [].; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 2ONH_A 2ONG_B 3P5R_A 3P5P_A 3N0F_A 3N0G_B 3PYB_A 3PYA_A 3G4F_A 3G4D_B ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	175
3n0f_A	555	Crystal Structure Of Isoprene Synthase From Grey Po		6e-40
1n1b_A	549	Crystal Structure Of (+)-bornyl Diphosphate Synthas		1e-36
2j5c_A	569	Rational Conversion Of Substrate And Product Specif		9e-35
3g4d_A	554	Crystal Structure Of (+)-Delta-Cadinene Synthase Fr		3e-32
5eas_A	548	5-Epi-Aristolochene Synthase From Nicotiana Tabacum		1e-30
5eat_A	548	5-Epi-Aristolochene Synthase From Nicotiana Tabacum		1e-30
1hx9_A	548	Crystal Structure Of Teas W273s Form 1 Length = 548		1e-30
2ong_A	543	Crystal Structure Of Of Limonene Synthase With 2- F		2e-30
3lz9_A	550	The Crystal Structure Of 5-Epi-Aristolochene Syntha		2e-30
4di5_A	535	Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synt		2e-30
3m01_A	550	The Crystal Structure Of 5-Epi-Aristolochene Syntha		2e-30
5eau_A	548	5-Epi-Aristolochene Synthase From Nicotiana Tabacum		2e-30
1hxg_A	548	Crystal Structure Of Teas W273sC440W Length = 548		2e-30
1hxc_A	548	Crystal Structure Of Teas C440w Length = 548		2e-30
3sae_A	817	Structure Of A Three-Domain Sesquiterpene Synthase:		2e-24
3p5p_A	764	Crystal Structure Of Taxadiene Synthase From Pacifi		1e-23
3s9v_A	785	Abietadiene Synthase From Abies Grandis Length = 78		2e-21
3pya_A	727	Crystal Structure Of Ent-Copalyl Diphosphate Syntha		1e-14

>pdb|3N0F|A Chain A, Crystal Structure Of Isoprene Synthase From Grey Poplar Leaves (Populus X Canescens) Length = 555

Iteration: 1
 Score =  159 bits (403), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 86/177 (48%), Positives = 121/177 (68%), Gaps = 6/177 (3%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGL Y FE++IR+ L    +S       K +L+AT+L FRLLRQHG+ VSQ+ F+GFKD 
Sbjct: 77  LGLGYRFESDIRRALDRFVSSGGFDGVTKTSLHATALSFRLLRQHGFEVSQEAFSGFKDQ 136
Query: 61  KGGFICN---DFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F+ N   D K I+SL+EAS+ + EGE+I++EA  F   HLKE  +S+ K G   +AE
Sbjct: 137 NGNFLENLKEDTKAILSLYEASFLALEGENILDEARVFAISHLKE--LSEEKIGKE-LAE 193
Query: 118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
           Q   ALELPLH +   LEA W I+ Y K+ED N +LLELA +++N++Q++YQ +L++
Sbjct: 194 QVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRE 250

>pdb|1N1B|A Chain A, Crystal Structure Of (+)-bornyl Diphosphate Synthase From Sage Length = 549

Iteration: 1
 Score =  148 bits (374), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/182 (43%), Positives = 120/182 (65%), Gaps = 7/182 (3%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYN---WRKENLYATSLEFRLLRQHGYPVSQDVFNGF 57
           LGL+  F+ EI++IL  IYN +K ++     K +LY T+L FRLLRQHG+ +SQDVFN F
Sbjct: 67  LGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCF 126
Query: 58  KDDKG----GFICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDV 113
           K++KG      +  D K ++ L+EAS+   +GE  +E A +F +K L++ +     + D 
Sbjct: 127 KNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEIDE 186
Query: 114 FVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
            +    + +L+LPLHW++  +EARWFID Y +R D N L+ ELAK+ FN++QA +Q+ELK
Sbjct: 187 NLLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNPLIFELAKLNFNIIQATHQQELK 246
Query: 174 DF 175
           D 
Sbjct: 247 DL 248

>pdb|2J5C|A Chain A, Rational Conversion Of Substrate And Product Specificity In A Monoterpene Synthase. Structural Insights Into The Molecular Basis Of Rapid Evolution. Length = 569

Iteration: 1
 Score =  142 bits (358), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 121/179 (67%), Gaps = 11/179 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++ HFE EI +IL++ Y +N + + R  +LY+T+L FRLLRQ+ + VSQ+VF+ FK+ 
Sbjct: 96  LGISCHFEREIVEILNSKYYTNNEIDER--DLYSTALRFRLLRQYDFSVSQEVFDCFKNA 153
Query: 61  KGG----FICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHL-KEVMISKSKQGDVFV 115
           KG      + +D + ++ L+EAS+ S +GE  +  A  F +K L K V++ K    D+ +
Sbjct: 154 KGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLRLARDFATKFLQKRVLVDK----DINL 209
Query: 116 AEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKD 174
               +RALELP HW+V M  AR FID Y++R D N  +LELAK++FN++QA +Q+ELK+
Sbjct: 210 LSSIERALELPTHWRVQMPNARSFIDAYKRRPDMNPTVLELAKLDFNMVQAQFQQELKE 268

>pdb|3G4D|A Chain A, Crystal Structure Of (+)-Delta-Cadinene Synthase From Gossypium Arboreum And Evolutionary Divergence Of Metal Binding Motifs For Catalysis Length = 554

Iteration: 1
 Score =  134 bits (337), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/178 (41%), Positives = 113/178 (63%), Gaps = 10/178 (5%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHF  EI   L NIY++N D    + +LY TS+ FRLLR+HGY VS DVFN FKD+
Sbjct: 83  LGVSYHFTKEIEDELENIYHNNND---AENDLYTTSIRFRLLREHGYNVSCDVFNKFKDE 139
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
           +G F   + +D + ++ L++ASY    GE I++EA  FT+ HL   + S     D  ++E
Sbjct: 140 QGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAVASL----DHPLSE 195
Query: 118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           +   AL+  +   +P +EAR ++ VY+  E  N  LLE AK++FN+LQ ++++EL + 
Sbjct: 196 EVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLHRKELSEI 253

>pdb|5EAS|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum Length = 548

Iteration: 1
 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 114/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI +IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 77  LGISYHFEKEIDEILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 132
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 133 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 188
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 189 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 244

>pdb|5EAT|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum With Substrate Analog Farnesyl Hydroxyphosphonate Length = 548

Iteration: 1
 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 114/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI +IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 77  LGISYHFEKEIDEILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 132
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 133 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 188
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 189 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 244

>pdb|1HX9|A Chain A, Crystal Structure Of Teas W273s Form 1 Length = 548

Iteration: 1
 Score =  128 bits (322), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 77  LGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 132
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 133 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 188
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 189 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 244

>pdb|2ONG|A Chain A, Crystal Structure Of Of Limonene Synthase With 2- Fluorogeranyl Diphosphate (Fgpp). Length = 543

Iteration: 1
 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 120/181 (66%), Gaps = 9/181 (4%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYN--WRKE--NLYATSLEFRLLRQHGYPVSQDVFNG 56
           +GL+ HF+ E ++IL +IY  +  Y   + KE  +LY+TSL FRLLR+HG+ V+Q+VF+ 
Sbjct: 63  MGLSDHFQNEFKEILSSIYLDHHYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQEVFDS 122
Query: 57  FKDDKGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDV 113
           FK+++G F   + +D + ++ L+EAS+   EGE+ +E A +F +K L+E +      GD+
Sbjct: 123 FKNEEGEFKESLSDDTRGLLQLYEASFLLTEGETTLESAREFATKFLEEKVNEGGVDGDL 182
Query: 114 FVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
               +   +L++PLHW++    A  +I+ Y KR D N ++LELA ++ N++QA +QEELK
Sbjct: 183 LT--RIAYSLDIPLHWRIKRPNAPVWIEWYRKRPDMNPVVLELAILDLNIVQAQFQEELK 240
Query: 174 D 174
           +
Sbjct: 241 E 241

>pdb|3LZ9|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase M4 Mut Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl Diphospha Length = 550

Iteration: 1
 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 79  LGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 134
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 135 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 190
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 191 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 246

>pdb|4DI5|A Chain A, Co-Crystal Structure Of Wt 5-Epi-Aristolochene Synthase From Nicotiana Tobaccum With Geraniline Length = 535

Iteration: 1
 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 64  LGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 119
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 120 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 175
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 176 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 231

>pdb|3M01|A Chain A, The Crystal Structure Of 5-Epi-Aristolochene Synthase Complexed With (2-Trans,6-Trans)-2-Fluorofarnesyl Diphosphate Length = 550

Iteration: 1
 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 79  LGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 134
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 135 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 190
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 191 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 246

>pdb|5EAU|A Chain A, 5-Epi-Aristolochene Synthase From Nicotiana Tabacum Length = 548

Iteration: 1
 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 77  LGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 132
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 133 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 188
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 189 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 244

>pdb|1HXG|A Chain A, Crystal Structure Of Teas W273sC440W Length = 548

Iteration: 1
 Score =  128 bits (321), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 77  LGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 132
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 133 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 188
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 189 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 244

>pdb|1HXC|A Chain A, Crystal Structure Of Teas C440w Length = 548

Iteration: 1
 Score =  127 bits (320), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 113/176 (64%), Gaps = 12/176 (6%)
Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 77  LGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 132
Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 133 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 188
Query: 118 QAKRALELPLHWKVPMLEARWFI-DVYEKREDKNHLLLELAKMEFNVLQAIYQEEL 172
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL
Sbjct: 189 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQEL 244

>pdb|3SAE|A Chain A, Structure Of A Three-Domain Sesquiterpene Synthase: A Prospective Target For Advanced Biofuels Production Length = 817

Iteration: 1
 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/205 (35%), Positives = 113/205 (55%), Gaps = 34/205 (16%)
Query: 1   LGLAYHFETEIRKILHNIYN--SNKDYNWRKEN----LYATSLEFRLLRQHGYPVSQDVF 54
           LG+  HFE EI++ L  +Y   + +   W + N    L  T+L FRLLR H Y VS  +F
Sbjct: 311 LGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIF 370
Query: 55  NGFKDDKGGFICN------DFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKS 108
           + FKD  G FIC+      D   +++L+ AS  +F GE+I++EA  F +K+L+E +  KS
Sbjct: 371 DNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREAL-EKS 429
Query: 109 KQGDVF-----VAEQAKRALELPLHWKVPMLEARWFIDVYEKRED--------------K 149
           +    +     ++++ K AL+   H  VP +EA+ +  VY  R D               
Sbjct: 430 ETSSAWNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVY--RPDYARIAKCVYKLPYVN 487
Query: 150 NHLLLELAKMEFNVLQAIYQEELKD 174
           N   LEL K++FN++Q+I+QEE+K+
Sbjct: 488 NEKFLELGKLDFNIIQSIHQEEMKN 512

>pdb|3P5P|A Chain A, Crystal Structure Of Taxadiene Synthase From Pacific Yew (Taxus Brevifolia) In Complex With Mg2+ And 13-Aza-13,14-Dihydrocopalyl Diphosphate Length = 764

Iteration: 1
 Score =  105 bits (263), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 27/198 (13%)
Query: 1   LGLAYHFETEIRKILHNIYN--SNKDYNWRKENLY----ATSLEFRLLRQHGYPVSQDVF 54
           LG+  HF+ EI+  L  +Y   S +   W +++L      T+L  R LR HGY VS DV 
Sbjct: 259 LGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVL 318
Query: 55  NGFKDDKGGFICN------DFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISK- 107
           N FKD+ G F  +      + + +++L  AS  +F  E  M++A +F   +L+E + +K 
Sbjct: 319 NNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKI 378
Query: 108 SKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYE-----KRED-------KNHLLLE 155
           S    +F  ++ +  +E P H  +P LEAR +ID Y+     +R+         N   LE
Sbjct: 379 STNTKLF--KEIEYVVEYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLE 436
Query: 156 LAKMEFNVLQAIYQEELK 173
           LAK++FN++Q+++QEELK
Sbjct: 437 LAKLDFNIVQSLHQEELK 454

>pdb|3S9V|A Chain A, Abietadiene Synthase From Abies Grandis Length = 785

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 106/207 (51%), Gaps = 36/207 (17%)
Query: 1   LGLAYHFETEIRKILHNIYN--SNKDYNWRKENLYA----TSLEFRLLRQHGYPVSQDVF 54
           LG+  HF+ EI++ L  +Y+    +   W +EN       T++  R+LR HGY VS DV 
Sbjct: 283 LGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVL 342
Query: 55  NGFKDDKGGFIC------NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKS 108
             F+D+ G F C          ++++++  S+ SF GE+IMEEA   T ++L+  +    
Sbjct: 343 KTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNAL---- 398
Query: 109 KQGDVF--------VAEQAKRALELPLHWKVPMLEARWFID------------VYEKRED 148
           +  D F        +  + + AL+ P H  +P LEAR +I+            VY     
Sbjct: 399 ENVDAFDKWAFKKNIRGEVEYALKYPWHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYI 458
Query: 149 KNHLLLELAKMEFNVLQAIYQEELKDF 175
            N   LELAK++FN +Q+I+Q EL+D 
Sbjct: 459 SNEKYLELAKLDFNKVQSIHQTELQDL 485

>pdb|3PYA|A Chain A, Crystal Structure Of Ent-Copalyl Diphosphate Synthase From Arabidopsis Thaliana In Complex With (S)-15-Aza-14,15-Dihydrogeranylgeranyl Thiolodiphosphate Length = 727

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 42/206 (20%)
Query: 1   LGLAYHFETEIRKILHNI--YNSNKDYNWRK----ENLYATSLEFRLLRQHGYPVSQDVF 54
           LG++ +FE EI++ L  +  Y ++    W +    +++  T++ FRLLRQHGY VS DVF
Sbjct: 258 LGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVF 317
Query: 55  NGFKDDKGGFIC------NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEV----- 103
             F + +G F C           + +L+ AS  +F  E I++ A +F+  +L E      
Sbjct: 318 KNF-EKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREE 376
Query: 104 -----MISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKRED---------- 148
                +I K   G++        ALE+P +  +P +E R++ID Y    D          
Sbjct: 377 LIDKWIIMKDLPGEIGF------ALEIPWYASLPRVETRFYIDQYGGENDVWIGKTLYRM 430
Query: 149 ---KNHLLLELAKMEFNVLQAIYQEE 171
               N+  LELAK ++N  QA +Q E
Sbjct: 431 PYVNNNGYLELAKQDYNNCQAQHQLE 456

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	175
3n0f_A	555	Isoprene synthase; terpene cyclase fold, hemiterpe	1e-49
1n1b_A	549	(+)-bornyl diphosphate synthase; terpene synthase	5e-49
3g4d_A	554	(+)-delta-cadinene synthase isozyme XC1; cyclase,	7e-49
2ong_A	543	4S-limonene synthase; monoterpene synthase, monote	3e-48
3m00_A	550	Aristolochene synthase; plant terpenoid cyclase, l	4e-48
2j5c_A	569	1,8-cineole synthase; terpene synthases, 1, monote	4e-48
3pya_A	727	ENT-copalyl diphosphate synthase, chloroplastic; c	9e-42
3sdr_A	817	Alpha-bisabolene synthase; lyase, terpene synthase	1e-41
3s9v_A	785	Abietadiene synthase, chloroplastic; alpha bundle/	2e-41
3p5p_A	764	Taxadiene synthase; class I and II terpene cyclase	8e-39

>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A* Length = 555

 Score =  166 bits (422), Expect = 1e-49
 Identities = 83/178 (46%), Positives = 118/178 (66%), Gaps = 6/178 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LGL Y FE++IR+ L    +S       K +L+AT+L FRLLRQHG+ VSQ+ F+GFKD 
Sbjct: 77  LGLGYRFESDIRRALDRFVSSGGFDGVTKTSLHATALSFRLLRQHGFEVSQEAFSGFKDQ 136

Query: 61  KGGFIC---NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F+     D K I+SL+EAS+ + EGE+I++EA  F   HLKE+   K  +    +AE
Sbjct: 137 NGNFLENLKEDTKAILSLYEASFLALEGENILDEARVFAISHLKELSEEKIGK---ELAE 193

Query: 118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           Q   ALELPLH +   LEA W I+ Y K+ED N +LLELA +++N++Q++YQ +L++ 
Sbjct: 194 QVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRET 251

>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A* Length = 549

 Score =  165 bits (418), Expect = 5e-49
 Identities = 80/182 (43%), Positives = 119/182 (65%), Gaps = 7/182 (3%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDY---NWRKENLYATSLEFRLLRQHGYPVSQDVFNGF 57
           LGL+  F+ EI++IL  IYN +K +      K +LY T+L FRLLRQHG+ +SQDVFN F
Sbjct: 67  LGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCF 126

Query: 58  KDDKGGF----ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDV 113
           K++KG      +  D K ++ L+EAS+   +GE  +E A +F +K L++ +     + D 
Sbjct: 127 KNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEIDE 186

Query: 114 FVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
            +    + +L+LPLHW++  +EARWFID Y +R D N L+ ELAK+ FN++QA +Q+ELK
Sbjct: 187 NLLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNPLIFELAKLNFNIIQATHQQELK 246

Query: 174 DF 175
           D 
Sbjct: 247 DL 248

>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A* Length = 554

 Score =  164 bits (417), Expect = 7e-49
 Identities = 72/178 (40%), Positives = 110/178 (61%), Gaps = 10/178 (5%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHF  EI   L NIY+   + N  + +LY TS+ FRLLR+HGY VS DVFN FKD+
Sbjct: 83  LGVSYHFTKEIEDELENIYH---NNNDAENDLYTTSIRFRLLREHGYNVSCDVFNKFKDE 139

Query: 61  KGGFIC---NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
           +G F     +D + ++ L++ASY    GE I++EA  FT+ HL   + S        ++E
Sbjct: 140 QGNFKSSVTSDVRGLLELYQASYLRVHGEDILDEAISFTTHHLSLAVASLDHP----LSE 195

Query: 118 QAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           +   AL+  +   +P +EAR ++ VY+  E  N  LLE AK++FN+LQ ++++EL + 
Sbjct: 196 EVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFAKIDFNMLQFLHRKELSEI 253

>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A* Length = 543

 Score =  163 bits (412), Expect = 3e-48
 Identities = 69/182 (37%), Positives = 117/182 (64%), Gaps = 9/182 (4%)

Query: 1   LGLAYHFETEIRKILHNIYNSNK----DYNWRKENLYATSLEFRLLRQHGYPVSQDVFNG 56
           +GL+ HF+ E ++IL +IY  +      +   + +LY+TSL FRLLR+HG+ V+Q+VF+ 
Sbjct: 63  MGLSDHFQNEFKEILSSIYLDHHYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQEVFDS 122

Query: 57  FKDDKGGFIC---NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDV 113
           FK+++G F     +D + ++ L+EAS+   EGE+ +E A +F +K L+E +      GD+
Sbjct: 123 FKNEEGEFKESLSDDTRGLLQLYEASFLLTEGETTLESAREFATKFLEEKVNEGGVDGDL 182

Query: 114 FVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELK 173
               +   +L++PLHW++    A  +I+ Y KR D N ++LELA ++ N++QA +QEELK
Sbjct: 183 --LTRIAYSLDIPLHWRIKRPNAPVWIEWYRKRPDMNPVVLELAILDLNIVQAQFQEELK 240

Query: 174 DF 175
           + 
Sbjct: 241 ES 242

>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A* Length = 550

 Score =  163 bits (412), Expect = 4e-48
 Identities = 70/179 (39%), Positives = 113/179 (63%), Gaps = 12/179 (6%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI  IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 79  LGISYHFEKEIDDILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 134

Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+    S +      + E
Sbjct: 135 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLE----SAAPHLKSPLRE 190

Query: 118 QAKRALELPLHWKVPMLEARWFID-VYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
           Q   ALE  LH  VP +E R+FI  +Y+K + KN++LL  AK++FN+LQ ++++EL   
Sbjct: 191 QVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRFAKLDFNLLQMLHKQELAQV 249

>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa} Length = 569

 Score =  163 bits (412), Expect = 4e-48
 Identities = 75/179 (41%), Positives = 119/179 (66%), Gaps = 9/179 (5%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++ HFE EI +IL++ Y +N + +  + +LY+T+L FRLLRQ+ + VSQ+VF+ FK+ 
Sbjct: 96  LGISCHFEREIVEILNSKYYTNNEID--ERDLYSTALRFRLLRQYDFSVSQEVFDCFKNA 153

Query: 61  KGGFIC----NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVA 116
           KG        +D + ++ L+EAS+ S +GE  +  A  F +K L++ ++      D+ + 
Sbjct: 154 KGTDFKPSLVDDTRGLLQLYEASFLSAQGEETLRLARDFATKFLQKRVLVDK---DINLL 210

Query: 117 EQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELAKMEFNVLQAIYQEELKDF 175
              +RALELP HW+V M  AR FID Y++R D N  +LELAK++FN++QA +Q+ELK+ 
Sbjct: 211 SSIERALELPTHWRVQMPNARSFIDAYKRRPDMNPTVLELAKLDFNMVQAQFQQELKEA 269

>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A* Length = 727

 Score =  147 bits (371), Expect = 9e-42
 Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 28/203 (13%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKD------YNWRKENLYATSLEFRLLRQHGYPVSQDVF 54
           LG++ +FE EI++ L  ++    D           +++  T++ FRLLRQHGY VS DVF
Sbjct: 258 LGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVF 317

Query: 55  NGFKDDKGGF-----ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSK 109
             F+ +   F            + +L+ AS  +F  E I++ A +F+  +L E    +  
Sbjct: 318 KNFEKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREEL 377

Query: 110 QGDVFV----AEQAKRALELPLHWKVPMLEARWFIDVYEKRED-------------KNHL 152
                +      +   ALE+P +  +P +E R++ID Y    D              N+ 
Sbjct: 378 IDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNG 437

Query: 153 LLELAKMEFNVLQAIYQEELKDF 175
            LELAK ++N  QA +Q E   F
Sbjct: 438 YLELAKQDYNNCQAQHQLEWDIF 460

>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A* Length = 817

 Score =  147 bits (370), Expect = 1e-41
 Identities = 67/203 (33%), Positives = 106/203 (52%), Gaps = 28/203 (13%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNW------RKENLYATSLEFRLLRQHGYPVSQDVF 54
           LG+  HFE EI++ L  +Y    +            +L  T+L FRLLR H Y VS  +F
Sbjct: 311 LGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIF 370

Query: 55  NGFKDDKGGFIC------NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVM---- 104
           + FKD  G FIC       D   +++L+ AS  +F GE+I++EA  F +K+L+E +    
Sbjct: 371 DNFKDANGKFICSTGQFNKDVASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSE 430

Query: 105 ISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDK------------NHL 152
            S +      ++++ K AL+   H  VP +EA+ +  VY     +            N  
Sbjct: 431 TSSAWNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVYRPDYARIAKCVYKLPYVNNEK 490

Query: 153 LLELAKMEFNVLQAIYQEELKDF 175
            LEL K++FN++Q+I+QEE+K+ 
Sbjct: 491 FLELGKLDFNIIQSIHQEEMKNV 513

>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis} Length = 785

 Score =  146 bits (369), Expect = 2e-41
 Identities = 61/203 (30%), Positives = 102/203 (50%), Gaps = 28/203 (13%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDY------NWRKENLYATSLEFRLLRQHGYPVSQDVF 54
           LG+  HF+ EI++ L  +Y+   +            ++  T++  R+LR HGY VS DV 
Sbjct: 283 LGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVL 342

Query: 55  NGFKDDKGGFIC------NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKS 108
             F+D+ G F C          ++++++  S+ SF GE+IMEEA   T ++L+  + +  
Sbjct: 343 KTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVD 402

Query: 109 KQGDVF----VAEQAKRALELPLHWKVPMLEARWFIDVYEKRE------------DKNHL 152
                     +  + + AL+ P H  +P LEAR +I+ Y   +              N  
Sbjct: 403 AFDKWAFKKNIRGEVEYALKYPWHKSMPRLEARSYIENYGPDDVWLGKTVYMMPYISNEK 462

Query: 153 LLELAKMEFNVLQAIYQEELKDF 175
            LELAK++FN +Q+I+Q EL+D 
Sbjct: 463 YLELAKLDFNKVQSIHQTELQDL 485

>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A* Length = 764

 Score =  139 bits (350), Expect = 8e-39
 Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 25/199 (12%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNW------RKENLYATSLEFRLLRQHGYPVSQDVF 54
           LG+  HF+ EI+  L  +Y    +            +L  T+L  R LR HGY VS DV 
Sbjct: 259 LGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVL 318

Query: 55  NGFKDDKGGFIC------NDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKS 108
           N FKD+ G F         + + +++L  AS  +F  E  M++A +F   +L+E + +K 
Sbjct: 319 NNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKI 378

Query: 109 KQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKR------------EDKNHLLLEL 156
              +  + ++ +  +E P H  +P LEAR +ID Y+                 N   LEL
Sbjct: 379 ST-NTKLFKEIEYVVEYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLEL 437

Query: 157 AKMEFNVLQAIYQEELKDF 175
           AK++FN++Q+++QEELK  
Sbjct: 438 AKLDFNIVQSLHQEELKLL 456

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
2ong_A	543	4S-limonene synthase; monoterpene synthase, monote	100.0
1n1b_A	549	(+)-bornyl diphosphate synthase; terpene synthase	100.0
3n0f_A	555	Isoprene synthase; terpene cyclase fold, hemiterpe	100.0
2j5c_A	569	1,8-cineole synthase; terpene synthases, 1, monote	100.0
3g4d_A	554	(+)-delta-cadinene synthase isozyme XC1; cyclase,	100.0
3m00_A	550	Aristolochene synthase; plant terpenoid cyclase, l	100.0
3p5p_A	764	Taxadiene synthase; class I and II terpene cyclase	100.0
3s9v_A	785	Abietadiene synthase, chloroplastic; alpha bundle/	100.0
3sdr_A	817	Alpha-bisabolene synthase; lyase, terpene synthase	100.0
3pya_A	727	ENT-copalyl diphosphate synthase, chloroplastic; c	100.0

>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*

Probab=100.00  E-value=7e-67  Score=478.83  Aligned_cols=173  Identities=40%  Similarity=0.713  Sum_probs=159.6

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCcc---cc-cCChhhhHHHHHHHHhcCCCcccccccccccCCCcc---cccchHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDYN---WR-KENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKEIM   73 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~~---~~-~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F---~~~d~~glL   73 (175)
                      |||+|||++||+++|++||+.+....   .. ..||++|||+|||||||||+||||||++|||++|+|   +++||+|||
T Consensus        63 LGi~~hF~~EI~~~L~~i~~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~vs~dvf~~Fk~~~g~F~~~l~~d~~glL  142 (543)
T 2ong_A           63 MGLSDHFQNEFKEILSSIYLDHHYYKNPFPKEERDLYSTSLAFRLLREHGFQVAQEVFDSFKNEEGEFKESLSDDTRGLL  142 (543)
T ss_dssp             TTGGGTTHHHHHHHHHHHHHTTTCCCSSCCCCCCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCTTGGGCHHHHH
T ss_pred             CCchhhhHHHHHHHHHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCCCccHHHHhcccCCCCCccchhhhccHHHH
Confidence            89999999999999999998653211   11 469999999999999999999999999999999999   789999999


Q ss_pred             HHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccCcccHHH
Q 046807           74 SLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLL  153 (175)
Q Consensus        74 ~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~l  153 (175)
                      ||||||||++|||+|||||+.||+++|++++.++ +. +++|+++|+|||++||||++||+||||||+.|++++++|++|
T Consensus       143 ~Ly~As~l~~~gE~iL~eA~~Ft~~~L~~~~~~~-~~-~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~l  220 (543)
T 2ong_A          143 QLYEASFLLTEGETTLESAREFATKFLEEKVNEG-GV-DGDLLTRIAYSLDIPLHWRIKRPNAPVWIEWYRKRPDMNPVV  220 (543)
T ss_dssp             HHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHSS-CS-SSHHHHHHHHHHHSCTTTSCSTTTHHHHHHHHHTCSSCCHHH
T ss_pred             HHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhcc-CC-CCcHHHHHHHHHhhhHhccchHHHHHHHHHHhccCccccHHH
Confidence            9999999999999999999999999999998332 32 678999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhHHHHHHHHHHhhcC
Q 046807          154 LELAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       154 LelAklDFn~~Q~~hq~EL~~l  175 (175)
                      |||||+|||+||++||+||+++
T Consensus       221 LelAkldFn~~Q~~hq~El~~l  242 (543)
T 2ong_A          221 LELAILDLNIVQAQFQEELKES  242 (543)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhHHHHHHHHHHHHHHH
Confidence            9999999999999999999864

>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*

Probab=100.00  E-value=1.6e-66  Score=477.00  Aligned_cols=174  Identities=47%  Similarity=0.782  Sum_probs=157.8

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCccc---ccCChhhhHHHHHHHHhcCCCcccccccccccCCC-cc---cccchHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDYNW---RKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKG-GF---ICNDFKEIM   73 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~~~---~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G-~F---~~~d~~glL   73 (175)
                      |||+|||++||+++|++||+.+...+.   ...||++|||+|||||||||+||||||++|+|++| +|   +++||+|||
T Consensus        67 LGi~~hF~~EI~~~L~~i~~~~~~~~~~~~~~~dl~~~al~FRlLR~hGy~Vs~dvf~~Fk~~~g~~F~~~l~~d~~glL  146 (549)
T 1n1b_A           67 LGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGML  146 (549)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSSBCGGGGGCHHHHH
T ss_pred             CCchhhhHHHHHHHHHHHHhhhccccccccccCChhhchhhhhHHHhcCCCcCHHHHhhccCCCCCccchhhhhccHHHH
Confidence            899999999999999999975421111   13699999999999999999999999999999999 99   789999999


Q ss_pred             HHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhcC-CCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccCcccHH
Q 046807           74 SLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKS-KQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHL  152 (175)
Q Consensus        74 ~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~-~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~  152 (175)
                      |||||||+++|||+|||+|+.||+++|++++.++. +. +++|+++|+|||++||||++||+||||||+.|++++++|++
T Consensus       147 ~LY~As~l~~~gE~iL~eA~~Ft~~~L~~~~~~~~~~~-~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~  225 (549)
T 1n1b_A          147 QLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEI-DENLLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPDMNPL  225 (549)
T ss_dssp             HHHHHHTTCCTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHSCGGGCCTTTSHHHHHHHHHHCTTCCHH
T ss_pred             HHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhcccccC-CCcHHHHHHHHhcCchhcCchHHHHHHHHHHhcccccccHH
Confidence            99999999999999999999999999999983220 22 67899999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhHHHHHHHHHHhhcC
Q 046807          153 LLELAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       153 lLelAklDFn~~Q~~hq~EL~~l  175 (175)
                      ||||||+|||+||++||+||+++
T Consensus       226 lLelAkldFn~~Q~~hq~El~~l  248 (549)
T 1n1b_A          226 IFELAKLNFNIIQATHQQELKDL  248 (549)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhHHHHHHHHHHHHHHH
Confidence            99999999999999999999864

>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*

Probab=100.00  E-value=2.5e-66  Score=476.13  Aligned_cols=172  Identities=48%  Similarity=0.769  Sum_probs=158.2

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCcccccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc---cccchHHHHHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKEIMSLHE   77 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F---~~~d~~glL~LYe   77 (175)
                      |||+|||++||+++|++||+......+...||++|||+|||||||||+||||||++|+|++|+|   +.+||+|||+|||
T Consensus        77 LGi~~hF~~EI~~~L~~i~~~~~~~~~~~~DL~~~Al~FRLLR~hGy~VS~dvF~~F~d~~G~F~~~l~~dv~glL~LYe  156 (555)
T 3n0f_A           77 LGLGYRFESDIRRALDRFVSSGGFDGVTKTSLHATALSFRLLRQHGFEVSQEAFSGFKDQNGNFLENLKEDTKAILSLYE  156 (555)
T ss_dssp             TTCGGGSHHHHHHHHHHHHHTCHHHHHTTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHH
T ss_pred             cCchhhhHHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHHhcCCCcChHHHhcccccCccchhhhhhhhHHHHHHHH
Confidence            8999999999999999999731111122479999999999999999999999999999999999   8899999999999


Q ss_pred             hhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccCcccHHHHHHH
Q 046807           78 ASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELA  157 (175)
Q Consensus        78 AS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelA  157 (175)
                      |||+++|||+|||+|+.||+++|++++.+ .+  +++|+++|++||++||||++||+||||||+.|++++++|++||+||
T Consensus       157 As~l~~~gE~iLdeA~~Fs~~~L~~~~~~-~~--~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelA  233 (555)
T 3n0f_A          157 ASFLALEGENILDEARVFAISHLKELSEE-KI--GKELAEQVNHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELA  233 (555)
T ss_dssp             HHTTCCTTCHHHHHHHHHHHHHHHTCCHH-HH--CHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTCTTCCHHHHHHH
T ss_pred             HHhcccCCcHHHHHHHHHHHHHHHHHHhc-cC--CchHHHHHHHHhcCCcccCchHHHHHHHHHHhcccccccHHHHHHH
Confidence            99999999999999999999999986522 34  7889999999999999999999999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHhhcC
Q 046807          158 KMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       158 klDFn~~Q~~hq~EL~~l  175 (175)
                      |+|||+||++||+||+++
T Consensus       234 KlDFN~~Q~~hq~EL~~l  251 (555)
T 3n0f_A          234 ILDYNMIQSVYQRDLRET  251 (555)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHhHHHHHHH
Confidence            999999999999999864

>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}

Probab=100.00  E-value=3e-66  Score=476.91  Aligned_cols=169  Identities=45%  Similarity=0.760  Sum_probs=156.9

Q ss_pred             CCCccccHHHHHHHHHHHH-hcCCCcccccCChhhhHHHHHHHHhcCCCcccccccccccCCC-cc---cccchHHHHHH
Q 046807            1 LGLAYHFETEIRKILHNIY-NSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKG-GF---ICNDFKEIMSL   75 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~-~~~~~~~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G-~F---~~~d~~glL~L   75 (175)
                      |||+|||++||+++|++|| +.+.+   ...||++|||+|||||||||+||||||++|+|++| +|   +++||+|||||
T Consensus        96 LGi~~hFe~EI~~~L~~i~~~~~~~---~~~Dl~~~al~FRlLR~hGy~Vs~dvF~~Fkd~~G~~F~~~l~~dv~glL~L  172 (569)
T 2j5c_A           96 LGISCHFEREIVEILNSKYYTNNEI---DERDLYSTALRFRLLRQYDFSVSQEVFDCFKNAKGTDFKPSLVDDTRGLLQL  172 (569)
T ss_dssp             HTCGGGGHHHHHHHHHHHTTSSCCS---CTTCHHHHHHHHHHHHHTTCCCCGGGGGGGBCSSSSSBCGGGGGCHHHHHHH
T ss_pred             CCchhhhHHHHHHHHHHHHHhccCc---ccCChhhhhHHhHHHHhcCCCcCHHHHhcccCCCCCccccchhhccHHHHHH
Confidence            7999999999999999999 74322   24799999999999999999999999999999999 99   78999999999


Q ss_pred             HHhhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccCcccHHHHH
Q 046807           76 HEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLE  155 (175)
Q Consensus        76 YeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLe  155 (175)
                      ||||||++|||+|||+|+.||+++|++++  .++. +++|+++|++||++||||++||+||||||+.|++++++|++|||
T Consensus       173 Y~As~l~~~gE~iLdeA~~Ft~~~L~~~~--~~~~-~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLe  249 (569)
T 2j5c_A          173 YEASFLSAQGEETLRLARDFATKFLQKRV--LVDK-DINLLSSIERALELPTHWRVQMPNARSFIDAYKRRPDMNPTVLE  249 (569)
T ss_dssp             HHHHTTCCTTCHHHHHHHHHHHHTTSSCC-------CHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHTTCTTCCHHHHH
T ss_pred             HHHHhcCCCChHHHHHHHHHHHHHHHHHH--hhcC-CCcHHHHHHHHhcCccccCcHHHHHHHHHHHhccCccccHHHHH
Confidence            99999999999999999999999999887  3332 67899999999999999999999999999999999999999999


Q ss_pred             HHHhhhHHHHHHHHHHhhcC
Q 046807          156 LAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       156 lAklDFn~~Q~~hq~EL~~l  175 (175)
                      |||+|||+||++||+||+++
T Consensus       250 lAkldFn~~Q~~hq~EL~~l  269 (569)
T 2j5c_A          250 LAKLDFNMVQAQFQQELKEA  269 (569)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHhHHHHHHHHHHHHHHH
Confidence            99999999999999999864

>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*

Probab=100.00  E-value=1.5e-65  Score=470.69  Aligned_cols=168  Identities=43%  Similarity=0.756  Sum_probs=158.8

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCcccccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc---cccchHHHHHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKEIMSLHE   77 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F---~~~d~~glL~LYe   77 (175)
                      |||+|||++||+++|++||+. ...  ...||++|||+|||||||||+||||||++|+|++|+|   +.+||+|||+|||
T Consensus        83 LGi~~hF~~EI~~~L~~i~~~-~~~--~~~dl~~~al~FRlLR~hGy~VS~dvf~~F~~~~g~F~~~l~~d~~glL~LYe  159 (554)
T 3g4d_A           83 LGVSYHFTKEIEDELENIYHN-NND--AENDLYTTSIRFRLLREHGYNVSCDVFNKFKDEQGNFKSSVTSDVRGLLELYQ  159 (554)
T ss_dssp             TTCGGGCHHHHHHHHHHHHHS-CCC--TTCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCHHHHHCHHHHHHHHH
T ss_pred             cCchhhhHHHHHHHHHHHHhc-cCC--CCCCHHHHHHHHHHHHhcCCCCChhHHhhhcccCCCcccccccchHHHHHHHH
Confidence            899999999999999999974 211  1379999999999999999999999999999999999   7899999999999


Q ss_pred             hhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccCcccHHHHHHH
Q 046807           78 ASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKREDKNHLLLELA  157 (175)
Q Consensus        78 AS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~~n~~lLelA  157 (175)
                      |||+++|||.|||+|+.||+++|++++  +.+  +++|+++|+|||++||||++||+||||||+.|++++++|++||+||
T Consensus       160 As~l~~~gE~iLdeA~~fs~~~L~~~~--~~~--~~~l~~~V~~aL~~P~~~~l~rlear~yI~~Y~~~~~~n~~lLelA  235 (554)
T 3g4d_A          160 ASYLRVHGEDILDEAISFTTHHLSLAV--ASL--DHPLSEEVSHALKQSIRRGLPRVEARHYLSVYQDIESHNKALLEFA  235 (554)
T ss_dssp             HHTTCCTTCHHHHHHHHHHHHHHHHHS--TTC--CTTHHHHHHHHHHCCTTTSCHHHHHHHHHHHHHSSTTCCHHHHHHH
T ss_pred             HHhCCCCCcHHHHHHHHHHHHHHHHHH--hcc--CchHHHHHHHHhCCCccCCchHHHHHHHHHHhCcCccccHHHHHHH
Confidence            999999999999999999999999998  566  7889999999999999999999999999999999999999999999


Q ss_pred             HhhhHHHHHHHHHHhhcC
Q 046807          158 KMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       158 klDFn~~Q~~hq~EL~~l  175 (175)
                      |+|||+||++||+||+++
T Consensus       236 kldFn~~Q~~hq~El~~l  253 (554)
T 3g4d_A          236 KIDFNMLQFLHRKELSEI  253 (554)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhHHHHHHH
Confidence            999999999999999864

>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*

Probab=100.00  E-value=1.5e-65  Score=470.42  Aligned_cols=167  Identities=41%  Similarity=0.727  Sum_probs=159.4

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCcccccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc---cccchHHHHHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKEIMSLHE   77 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F---~~~d~~glL~LYe   77 (175)
                      |||+|||++||+++|++||+.+..    ..||++|||+|||||||||+||||||++|+|++|+|   +.+||+|||+|||
T Consensus        79 LGi~~hF~~EI~~~L~~i~~~~~~----~~dl~~~al~FRLLR~hGy~VS~dvf~~F~~~~G~F~~~l~~d~~glL~LYe  154 (550)
T 3m00_A           79 LGISYHFEKEIDDILDQIYNQNSN----CNDLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYE  154 (550)
T ss_dssp             TTCGGGCHHHHHHHHHHHHHHCCC----CSSHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCGGGGGCHHHHHHHHH
T ss_pred             cCchhhhHHHHHHHHHHHHHhccc----CCCHHHHHHHHHHHHhcCCCCChHHhhhccccCCCccccchhchHHHHHHHH
Confidence            899999999999999999986543    379999999999999999999999999999999999   8899999999999


Q ss_pred             hhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHhcCCCccCCchHHHHHhhHH-HhhccCcccHHHHHH
Q 046807           78 ASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFID-VYEKREDKNHLLLEL  156 (175)
Q Consensus        78 AS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~-~Y~~~~~~n~~lLel  156 (175)
                      |||+++|||.|||+|+.||+++|++++  +++  +++|+++|+|||++||||++||+||||||+ .|++++++|++||+|
T Consensus       155 As~l~~~gE~iLdeA~~fs~~~L~~~~--~~~--~~~l~~~V~~aL~~P~~~~l~rlear~yI~~~Y~~~~~~n~~lLel  230 (550)
T 3m00_A          155 ASHVRTHADDILEDALAFSTIHLESAA--PHL--KSPLREQVTHALEQCLHKGVPRVETRFFISSIYDKEQSKNNVLLRF  230 (550)
T ss_dssp             HHTTCCTTCGGGTTHHHHHHHHHHHHG--GGC--CTTHHHHHHHHHHSCSTTSCHHHHHHHHHHHTGGGCTTCCHHHHHH
T ss_pred             HHhcCCCCcHHHHHHHHHHHHHHHHHH--hcc--CccHHHHHHHHhCCCccCCchHHHHHHHHHHHhcccccccHHHHHH
Confidence            999999999999999999999999988  556  788999999999999999999999999999 999999999999999


Q ss_pred             HHhhhHHHHHHHHHHhhcC
Q 046807          157 AKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       157 AklDFn~~Q~~hq~EL~~l  175 (175)
                      ||+|||+||++||+||+++
T Consensus       231 AkldFn~~Q~~hq~EL~~l  249 (550)
T 3m00_A          231 AKLDFNLLQMLHKQELAQV  249 (550)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhHHHHHHH
Confidence            9999999999999999864

>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*

Probab=100.00  E-value=3e-61  Score=455.51  Aligned_cols=173  Identities=37%  Similarity=0.603  Sum_probs=157.9

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCc------ccccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc------cccc
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDY------NWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF------ICND   68 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~------~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F------~~~d   68 (175)
                      |||+|||++||+++|+.||+.+...      .....|+++|||+|||||||||+||||||++|+|++|+|      +.+|
T Consensus       259 LGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~~~~~d  338 (764)
T 3p5p_A          259 LGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFKDENGRFFSSAGQTHVE  338 (764)
T ss_dssp             HTCGGGGHHHHHHHHHHHHHTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCSCTTCSCCC
T ss_pred             cCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHhcCCCccHhHHHhhhcCCCCccccccccccc
Confidence            7999999999999999999864321      112469999999999999999999999999999999999      4689


Q ss_pred             hHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhc-CCCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccC
Q 046807           69 FKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISK-SKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKRE  147 (175)
Q Consensus        69 ~~glL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~-~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~  147 (175)
                      |+||||||||||+++|||+|||||+.||+++|++++.++ .+  +++|+++|+|||++||||++||+||||||+.|++++
T Consensus       339 v~gmL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~--~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~~~~  416 (764)
T 3p5p_A          339 LRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKIST--NTKLFKEIEYVVEYPWHMSIPRLEARSYIDSYDDNY  416 (764)
T ss_dssp             HHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHHTSCS--SSHHHHHHHHHHHSCGGGCCHHHHHHHHHHHCCTTC
T ss_pred             cHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhccCCC--CccHHHHHHHHhcCchhccchHHHHHHHHHHhcccc
Confidence            999999999999999999999999999999999988542 35  788999999999999999999999999999999876


Q ss_pred             c------------ccHHHHHHHHhhhHHHHHHHHHHhhcC
Q 046807          148 D------------KNHLLLELAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       148 ~------------~n~~lLelAklDFn~~Q~~hq~EL~~l  175 (175)
                      .            +|++||||||+|||+||++||+||+++
T Consensus       417 ~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l  456 (764)
T 3p5p_A          417 VWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLL  456 (764)
T ss_dssp             CEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhcccccccccccHHHHHHHHHHHHHHHHHhHHHhhhh
Confidence            5            499999999999999999999999864

>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}

Probab=100.00  E-value=6.7e-61  Score=454.17  Aligned_cols=173  Identities=35%  Similarity=0.563  Sum_probs=157.2

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCc--c----cccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc------cccc
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDY--N----WRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF------ICND   68 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~--~----~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F------~~~d   68 (175)
                      |||+|||++||+++|+.||+.+...  .    ....|+++|||+|||||||||+||||||++|+|++|+|      ..+|
T Consensus       283 LGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~e~~~d  362 (785)
T 3s9v_A          283 LGIDRHFKEEIKEALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRG  362 (785)
T ss_dssp             TTCGGGGHHHHHHHHHHHHTTCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSCBCSSTTCCCCC
T ss_pred             cCCccccHHHHHHHHHHHHHHhhhccccccccCCCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhcCCCeeecccccccc
Confidence            8999999999999999999864321  1    12469999999999999999999999999999999999      2589


Q ss_pred             hHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhc------CCCCChhHHHHHHHhcCCCccCCchHHHHHhhHHH
Q 046807           69 FKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISK------SKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDV  142 (175)
Q Consensus        69 ~~glL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~------~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~  142 (175)
                      |+|||+||||||+++|||+|||||+.||+++|++++.++      .+  +++|+++|+|||++||||++||+||||||++
T Consensus       363 v~g~L~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~d~~~~--~~~L~~eV~~aL~~P~~~~l~RleaR~yI~~  440 (785)
T 3s9v_A          363 VTDMLNVNRCSHVSFPGETIMEEAKLCTERYLRNALENVDAFDKWAF--KKNIRGEVEYALKYPWHKSMPRLEARSYIEN  440 (785)
T ss_dssp             HHHHHHHHHHHTSCCTTCHHHHHHHHHHHHHHHHHTTTCCTTCTTCS--SSCHHHHHHHHHHSCGGGCCHHHHHHHHHHH
T ss_pred             ccccHHHHhHhhcCCCCcHHHHHHHHHHHHHHHHHHhcccccccccc--CCcHHHHHHHHhCCccccCchHHHHHHHHHH
Confidence            999999999999999999999999999999999987432      24  6789999999999999999999999999999


Q ss_pred             hhccCc------------ccHHHHHHHHhhhHHHHHHHHHHhhcC
Q 046807          143 YEKRED------------KNHLLLELAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       143 Y~~~~~------------~n~~lLelAklDFn~~Q~~hq~EL~~l  175 (175)
                      |++++.            +|++||||||+|||+||++||+||+++
T Consensus       441 Y~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l  485 (785)
T 3s9v_A          441 YGPDDVWLGKTVYMMPYISNEKYLELAKLDFNKVQSIHQTELQDL  485 (785)
T ss_dssp             CCTTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hcccchhhhcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            998875            399999999999999999999999864

>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*

Probab=100.00  E-value=5.6e-61  Score=456.26  Aligned_cols=175  Identities=37%  Similarity=0.586  Sum_probs=154.5

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCc------ccccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc------cccc
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDY------NWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF------ICND   68 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~------~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F------~~~d   68 (175)
                      |||+|||++||+++|+.||+.+...      .....|+++|||+|||||||||+||||||++|+|++|+|      +.+|
T Consensus       311 LGi~~hF~~EI~~~L~~i~~~~~~~gi~~~~~~~~~Dl~~tAl~FRlLR~~Gy~VS~dvf~~F~d~~g~F~~~~~~~~~d  390 (817)
T 3sdr_A          311 LGIYRHFEKEIKEALDYVYRHWNERGIGWGRLNPIADLETTALGFRLLRLHRYNVSPAIFDNFKDANGKFICSTGQFNKD  390 (817)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHCCTTCCCSSTTCSSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCC--CBCCCSSCHHHH
T ss_pred             cCCccccHHHHHHHHHHHHHHhhhcccccccCCCCCCHHHHHHHHHHHHHcCCCccHhHHHHHhhcCCCceechhhhchh
Confidence            8999999999999999999864321      112469999999999999999999999999999999999      2589


Q ss_pred             hHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCC----ChhHHHHHHHhcCCCccCCchHHHHHhhHHHhh
Q 046807           69 FKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQG----DVFVAEQAKRALELPLHWKVPMLEARWFIDVYE  144 (175)
Q Consensus        69 ~~glL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~----~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~  144 (175)
                      |+|||+||||||+++|||+|||||+.||+++|++++.++...+    +++|+++|+|||++||||++||+||||||++|+
T Consensus       391 v~gmL~LYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~~~~~~~~~L~~eV~~aL~~P~~~~l~Rlear~yI~~Y~  470 (817)
T 3sdr_A          391 VASMLNLYRASQLAFPGENILDEAKSFATKYLREALEKSETSSAWNNKQNLSQEIKYALKTSWHASVPRVEAKRYCQVYR  470 (817)
T ss_dssp             HHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHTSGGGGSHHHHHTTHHHHHHHHHHCCSTTCCHHHHHHHHHTTCC
T ss_pred             hHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHhccccccccccCCcHHHHHHHHhcCchhccChHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999874322110    367999999999999999999999999999999


Q ss_pred             ccCc------------ccHHHHHHHHhhhHHHHHHHHHHhhcC
Q 046807          145 KRED------------KNHLLLELAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       145 ~~~~------------~n~~lLelAklDFn~~Q~~hq~EL~~l  175 (175)
                      +++.            +|++||||||+|||+||++||+||+++
T Consensus       471 ~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l  513 (817)
T 3sdr_A          471 PDYARIAKCVYKLPYVNNEKFLELGKLDFNIIQSIHQEEMKNV  513 (817)
T ss_dssp             TTCCEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchhhhhhcccccccccHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            8775            499999999999999999999999864

>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*

Probab=100.00  E-value=1.4e-59  Score=441.77  Aligned_cols=174  Identities=34%  Similarity=0.459  Sum_probs=155.6

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCc--c----cccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc------cccc
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDY--N----WRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF------ICND   68 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~--~----~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F------~~~d   68 (175)
                      |||+|||++||+++|+.+|+.+...  .    ....|+++|||+|||||||||+||||||++|+ ++|+|      ..+|
T Consensus       258 LGIs~hFe~EI~~~L~~i~~~~~~~g~~~~~~~~~~DL~~tAL~FRLLRqhGy~VS~DvF~~Fk-~~G~F~~~~~e~~~D  336 (727)
T 3pya_A          258 LGISRYFEEEIKECLDYVHRYWTDNGICWARCSHVQDIDDTAMAFRLLRQHGYQVSADVFKNFE-KEGEFFCFVGQSNQA  336 (727)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHTCCTTCCCSSSSCSCCCHHHHHHHHHHHHHTTCCCCGGGGGGGE-ETTEECSSTTCCCCC
T ss_pred             cCCccccHHHHHHHHHHHHHHhhhcCcccccCCCCCCHHHHHHHHHHHHhCCCCCCHHHHHhcc-CCCcccccccccccc
Confidence            8999999999999999999864321  1    12469999999999999999999999999999 78999      3579


Q ss_pred             hHHHHHHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCC----ChhHHHHHHHhcCCCccCCchHHHHHhhHHHhh
Q 046807           69 FKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQG----DVFVAEQAKRALELPLHWKVPMLEARWFIDVYE  144 (175)
Q Consensus        69 ~~glL~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~----~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~  144 (175)
                      ++|||+||||||+++|||+|||+|+.||+++|++.+.++.+.+    +++|+++|+|||++||||++||+||||||+.|+
T Consensus       337 v~glLsLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~~~~~~~~dkw~~~~~L~~~V~~aL~~P~~~~l~RleaR~yI~~Y~  416 (727)
T 3pya_A          337 VTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREELIDKWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQYG  416 (727)
T ss_dssp             HHHHHHHHHHHTTCCTTCHHHHHHHHHHHHHHHHHHHTTCCCCSSEECSCHHHHHHHHHHSCGGGCCHHHHHHHHHHHCC
T ss_pred             cHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHhcCCcccccccCCcHHHHHHHHhcCcHhcCChHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999875443321    478999999999999999999999999999999


Q ss_pred             ccCc-------------ccHHHHHHHHhhhHHHHHHHHHHhhcC
Q 046807          145 KRED-------------KNHLLLELAKMEFNVLQAIYQEELKDF  175 (175)
Q Consensus       145 ~~~~-------------~n~~lLelAklDFn~~Q~~hq~EL~~l  175 (175)
                      ++++             +|++||||||+|||+||++||+||+++
T Consensus       417 ~~~~~~i~Kt~yr~~~~~n~~lLelAKlDFN~~Q~~hq~EL~~l  460 (727)
T 3pya_A          417 GENDVWIGKTLYRMPYVNNNGYLELAKQDYNNCQAQHQLEWDIF  460 (727)
T ss_dssp             GGGCEEESSSEECCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCcchhhhhhhccccccccHHHHHHHHHhHHHHHHHhHHHHhhh
Confidence            7654             699999999999999999999999864

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	175
d1n1ba1	207	a.102.4.1 (A:64-270) (+)-bornyl diphosphate syntha	2e-52
d5easa1	197	a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase	4e-46
d5easa2	328	a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase	6e-07
d1n1ba2	328	a.128.1.3 (A:271-598) (+)-bornyl diphosphate synth	1e-06

>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Length = 207

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Terpenoid cyclases/Protein prenyltransferases
family: Terpenoid cyclase N-terminal domain
domain: (+)-bornyl diphosphate synthase
species: Garden sage (Salvia officinalis) [TaxId: 38868]

 Score =  164 bits (416), Expect = 2e-52
 Identities = 64/155 (41%), Positives = 99/155 (63%), Gaps = 7/155 (4%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKE---NLYATSLEFRLLRQHGYPVSQDVFNGF 57
           LGL+  F+ EI++IL  IYN +K ++  +    +LY T+L FRLLRQHG+ +SQDVFN F
Sbjct: 53  LGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCF 112

Query: 58  KDDKGGF----ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDV 113
           K++KG      +  D K ++ L+EAS+   +GE  +E A +F +K L++ +     + D 
Sbjct: 113 KNEKGIDFKASLAQDTKGMLQLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEIDE 172

Query: 114 FVAEQAKRALELPLHWKVPMLEARWFIDVYEKRED 148
            +    + +L+LPLHW++  +EARWFID Y +R D
Sbjct: 173 NLLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPD 207

>d5easa1 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 197

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Terpenoid cyclases/Protein prenyltransferases
family: Terpenoid cyclase N-terminal domain
domain: 5-Epi-aristolochene synthase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score =  147 bits (373), Expect = 4e-46
 Identities = 57/151 (37%), Positives = 91/151 (60%), Gaps = 12/151 (7%)

Query: 1   LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDD 60
           LG++YHFE EI +IL  IYN N + N    +L  ++L+FRLLRQHG+ +S ++F+ F+D+
Sbjct: 54  LGISYHFEKEIDEILDQIYNQNSNCN----DLCTSALQFRLLRQHGFNISPEIFSKFQDE 109

Query: 61  KGGF---ICNDFKEIMSLHEASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAE 117
            G F   + +D   +++L+EAS+     + I+E+A  F++ HL+             + E
Sbjct: 110 NGKFKESLASDVLGLLNLYEASHVRTHADDILEDALAFSTIHLESAAPHLKS----PLRE 165

Query: 118 QAKRALELPLHWKVPMLEARWFID-VYEKRE 147
           Q   ALE  LH  VP +E R+FI  +Y+K +
Sbjct: 166 QVTHALEQCLHKGVPRVETRFFISSIYDKEQ 196

>d5easa2 a.128.1.3 (A:221-548) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 328

class: All alpha proteins
fold: Terpenoid synthases
superfamily: Terpenoid synthases
family: Terpenoid cyclase C-terminal domain
domain: 5-Epi-aristolochene synthase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

 Score = 46.0 bits (109), Expect = 6e-07
 Identities = 12/27 (44%), Positives = 21/27 (77%)

Query: 149 KNHLLLELAKMEFNVLQAIYQEELKDF 175
           KN++LL  AK++FN+LQ ++++EL   
Sbjct: 1   KNNVLLRFAKLDFNLLQMLHKQELAQV 27

>d1n1ba2 a.128.1.3 (A:271-598) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]} Length = 328

class: All alpha proteins
fold: Terpenoid synthases
superfamily: Terpenoid synthases
family: Terpenoid cyclase C-terminal domain
domain: (+)-bornyl diphosphate synthase
species: Garden sage (Salvia officinalis) [TaxId: 38868]

 Score = 44.9 bits (106), Expect = 1e-06
 Identities = 15/26 (57%), Positives = 21/26 (80%)

Query: 150 NHLLLELAKMEFNVLQAIYQEELKDF 175
           N L+ ELAK+ FN++QA +Q+ELKD 
Sbjct: 2   NPLIFELAKLNFNIIQATHQQELKDL 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d1n1ba1	207	(+)-bornyl diphosphate synthase {Garden sage (Salv	100.0
d5easa1	197	5-Epi-aristolochene synthase {Tobacco (Nicotiana t	100.0

>d1n1ba1 a.102.4.1 (A:64-270) (+)-bornyl diphosphate synthase {Garden sage (Salvia officinalis) [TaxId: 38868]}

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Terpenoid cyclases/Protein prenyltransferases
family: Terpenoid cyclase N-terminal domain
domain: (+)-bornyl diphosphate synthase
species: Garden sage (Salvia officinalis) [TaxId: 38868]

Probab=100.00  E-value=3.6e-60  Score=386.88  Aligned_cols=146  Identities=45%  Similarity=0.773  Sum_probs=131.1

Q ss_pred             CCCccccHHHHHHHHHHHHhcCC---CcccccCChhhhHHHHHHHHhcCCCcccccccccccCCC-cc---cccchHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNK---DYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKG-GF---ICNDFKEIM   73 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~---~~~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G-~F---~~~d~~glL   73 (175)
                      |||+|||++||+++|++||++..   +......||++|||+|||||||||+||||||++|+|++| +|   +.+||+|||
T Consensus        53 LGisyhFe~EI~~~L~~i~~~~~~~~~~~~~~~DL~~~AL~FRLLRqhGy~VS~dvF~~F~d~~g~~fk~~l~~Dv~glL  132 (207)
T d1n1ba1          53 LGLSDFFQDEIKEILGVIYNEHKCFHNNEVEKMDLYFTALGFRLLRQHGFNISQDVFNCFKNEKGIDFKASLAQDTKGML  132 (207)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHCHHHHHCCCCSCCHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSSBCGGGGGCHHHHH
T ss_pred             cCcHHHHHHHHHHHHHHHHHhchhccccccccccHHHHHHHHHHHHHcCCCCCHHHHHHhccCCCCchhhhHHHhHHHHH
Confidence            89999999999999999997421   111235699999999999999999999999999999999 78   899999999


Q ss_pred             HHHHhhcCCCCCccHHHHHHHHHHHHHHHHHhhc--CCCCChhHHHHHHHhcCCCccCCchHHHHHhhHHHhhccCc
Q 046807           74 SLHEASYYSFEGESIMEEAWQFTSKHLKEVMISK--SKQGDVFVAEQAKRALELPLHWKVPMLEARWFIDVYEKRED  148 (175)
Q Consensus        74 ~LYeAS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~--~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~~Y~~~~~  148 (175)
                      +||||||+++|||+|||+|++||+++|++++.++  .+  +++|+++|.|||++|+||+|||+||||||+.|+++++
T Consensus       133 sLYeAS~l~~~gE~iLdeA~~Ft~~~L~~~l~~~~~~~--~~~l~~~V~~AL~~P~~~~l~rleaR~yI~~Ye~~~d  207 (207)
T d1n1ba1         133 QLYEASFLLRKGEDTLELAREFATKCLQKKLDEGGNEI--DENLLLWIRHSLDLPLHWRIQSVEARWFIDAYARRPD  207 (207)
T ss_dssp             HHHHHHTTCCTTCHHHHHHHHHHHHHHHHHTC--------CHHHHHHHHHHHHSCGGGCCTTTSHHHHHHHHHHCTT
T ss_pred             HHHHHHccCCCchHHHHHHHHHHHHHHHHHHHhccccc--chhHHHHHHHHhCCCccCCCcHHHHHHhHHHhCCCCC
Confidence            9999999999999999999999999999988543  34  7899999999999999999999999999999998763

>d5easa1 a.102.4.1 (A:24-220) 5-Epi-aristolochene synthase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Terpenoid cyclases/Protein prenyltransferases
family: Terpenoid cyclase N-terminal domain
domain: 5-Epi-aristolochene synthase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=100.00  E-value=6.6e-59  Score=376.88  Aligned_cols=139  Identities=40%  Similarity=0.725  Sum_probs=131.4

Q ss_pred             CCCccccHHHHHHHHHHHHhcCCCcccccCChhhhHHHHHHHHhcCCCcccccccccccCCCcc---cccchHHHHHHHH
Q 046807            1 LGLAYHFETEIRKILHNIYNSNKDYNWRKENLYATSLEFRLLRQHGYPVSQDVFNGFKDDKGGF---ICNDFKEIMSLHE   77 (175)
Q Consensus         1 LGI~~hF~~EI~~~L~~i~~~~~~~~~~~~dl~~~AL~FRLLRqhGy~VS~Dvf~~F~d~~G~F---~~~d~~glL~LYe   77 (175)
                      |||+|||++||+++|+.||+++..    ..||++|||+|||||||||+||||||++|+|++|+|   +++||+|||+|||
T Consensus        54 LGi~yhFe~EI~~~L~~i~~~~~~----~~dl~~~AL~FRLLRqhGy~Vs~dvF~~Fkd~~G~f~~~l~~D~~glLsLYe  129 (197)
T d5easa1          54 LGISYHFEKEIDEILDQIYNQNSN----CNDLCTSALQFRLLRQHGFNISPEIFSKFQDENGKFKESLASDVLGLLNLYE  129 (197)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHCCC----CCSHHHHHHHHHHHHHTTCCCCGGGGGGGBCTTSSBCGGGGGCHHHHHHHHH
T ss_pred             cCcHHHHHHHHHHHHHHHHHhCCC----CCcHHHHHHHHHHHHHcCcccCHHHHhhhccCCCCcccchhHhHHHHHHHHH
Confidence            899999999999999999986543    369999999999999999999999999999999999   8999999999999


Q ss_pred             hhcCCCCCccHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHhcCCCccCCchHHHHHhhHH-HhhccC
Q 046807           78 ASYYSFEGESIMEEAWQFTSKHLKEVMISKSKQGDVFVAEQAKRALELPLHWKVPMLEARWFID-VYEKRE  147 (175)
Q Consensus        78 AS~l~~~gE~iLdeA~~Fs~~~L~~~~~~~~~~~~~~l~~~V~~aL~~P~~~~l~Rlear~yI~-~Y~~~~  147 (175)
                      |||++++||+|||+|++||+++|++.+  +.+  +++|+++|.|||++|+||++||+||||||+ .|++++
T Consensus       130 AS~l~~~gE~iLdeA~~Ft~~~L~~~~--~~~--~~~l~~~V~~aL~~P~h~~l~rleaR~yI~~~Ye~e~  196 (197)
T d5easa1         130 ASHVRTHADDILEDALAFSTIHLESAA--PHL--KSPLREQVTHALEQCLHKGVPRVETRFFISSIYDKEQ  196 (197)
T ss_dssp             HHTTCCTTCGGGTTHHHHHHHHHHHHG--GGC--CTTHHHHHHHHHHSCSTTSCHHHHHHHHHHHTGGGCT
T ss_pred             HhccCCCCcHHHHHHHHHHHHHHHHHH--hhc--CccHHHHHHHHhCCCccCCCcHHHHHHHHHHHhcccC
Confidence            999999999999999999999999998  667  889999999999999999999999999995 688765