Citrus Sinensis ID: 046862


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-----
MEKIPIQVLFCCFFVVLLLLSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIVKSYRPDDENQNP
ccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccEEEEEcccEEEEEcccEEEEEEcccccEEEEccEEEEEEEEEEEcccccccccccccEEEEEEEEcccccEEEEEEEEEEcccccHHHHHHHHHccccccccEEEEcccccccccccccccEEEEccccccccccccEEEEEccccccccHHHHHHHHHHccccccccccccccccccEEEEEccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHccHHHHHHHccccccccEcccccEEEccccccEEEEcccEccEEEEccccEEEEccccccEEEEccEEEEEEEEEEEcccccEEccEcccEEEEEEEEcccccEEEEEEEEEEcccccccHHHHcccccccEccccccccccccHHHHccccccEEEEEEccccccccccEEEEEEcccEEEcHHHHHHHcHHHcccccccccccccccccEEEEEccccccccc
MEKIPIQVLFCCFFVVLLLLSGTaisqevddeiefnyeeggengpskwgqLHSEWsackngrmqspIDLLNERVQVVSHLgrlkrsykpsnatlknrghdmmlqweggagtlringtEYVLQqchwhspsehtinGQRFALEAHMVHVSQDGKIAVVGIMYkigrpdsflESISDHLTQVagsneretvagvidprgikigsrkYYRYigsltippctenVLWTIVRKVRTVTREQVRSLRVAVhdesdtnarpqqpinlrivksyrpddenqnp
MEKIPIQVLFCCFFVVLLLLSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVShlgrlkrsykpsnatlknrghDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQvagsneretvagvidprgikigsRKYYRYIGsltippctenvlWTIVRKVRTVTREQVRSLrvavhdesdtnarpqqpinlrivksyrpddenqnp
MEKIPIQvlfccffvvllllSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIVKSYRPDDENQNP
***IPIQVLFCCFFVVLLLLSGTAISQEVDDEIEFNY**********WGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLK************RGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVA********************************
****PIQVLFCCFFVVLLLLSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVA******T*AGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIVK***********
MEKIPIQVLFCCFFVVLLLLSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIVKSYR********
*EKIPIQVLFCCFFVVLLLLSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIVKSYRPDD*****
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEKIPIQVLFCCFFVVLLLLSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIVKSYRPDDENQNP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query275 2.2.26 [Sep-21-2011]
Q84UV8274 Bifunctional monodehydroa N/A no 0.912 0.916 0.550 1e-75
Q50940252 Carbonic anhydrase OS=Nei yes no 0.869 0.948 0.338 1e-36
Q6DAJ6244 Carbonic anhydrase OS=Erw yes no 0.865 0.975 0.304 1e-31
O52538244 Carbonic anhydrase OS=Erw no no 0.858 0.967 0.306 5e-31
P94170264 Carbonic anhydrase OS=Nos yes no 0.803 0.837 0.333 2e-28
O52535246 Carbonic anhydrase OS=Kle yes no 0.796 0.890 0.321 6e-27
P48282261 Carbonic anhydrase 1 OS=O N/A no 0.8 0.842 0.313 4e-24
Q1LZA1261 Carbonic anhydrase 1 OS=B yes no 0.8 0.842 0.317 1e-23
P13634261 Carbonic anhydrase 1 OS=M yes no 0.803 0.846 0.296 2e-23
Q92051260 Carbonic anhydrase OS=Dan no no 0.803 0.85 0.305 1e-22
>sp|Q84UV8|NEC3_NICLS Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NEC3 PE=1 SV=1 Back     alignment and function desciption
 Score =  283 bits (723), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 141/256 (55%), Positives = 181/256 (70%), Gaps = 5/256 (1%)

Query: 13  FFVVLLLLSGT--AISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLL 70
            F+  L LS    A S EVDDE EF+Y+E  ENGP+ WG +  +W  C +G++QSPID+ 
Sbjct: 10  LFISFLFLSSVFLARSGEVDDESEFSYDEKSENGPANWGNIRPDWKEC-SGKLQSPIDIF 68

Query: 71  NERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPS 130
           + R +VVS+L  L++ YKPSNATL NRGHD+ML+ + G G L+IN T+Y L+Q HWH+PS
Sbjct: 69  DLRAEVVSNLRILQKDYKPSNATLLNRGHDIMLRLDDG-GYLKINETQYQLKQLHWHTPS 127

Query: 131 EHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGR-PDSFLESISDHLTQVAGSNERETV 189
           EHTING+RF LEAH+VH S +GK  V+GI+Y+IG  PD FL  I + L   A     E  
Sbjct: 128 EHTINGERFNLEAHLVHESNNGKFVVIGIVYEIGLWPDPFLSMIENDLKVPANKKGIERG 187

Query: 190 AGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESD 249
            G+IDP  IK+  +KY+RYIGSLT PPCTE V+W I RKV+TVTR Q++ L+ AVHD  +
Sbjct: 188 IGIIDPNQIKLDGKKYFRYIGSLTTPPCTEGVVWIIDRKVKTVTRRQIKLLQEAVHDGFE 247

Query: 250 TNARPQQPINLRIVKS 265
           TNARP QP N R + S
Sbjct: 248 TNARPTQPENERYINS 263




Bifunctional enzyme which has both carbonate dehydratase and monodehydroascorbate reductase activities. May be involved in regulation of nectar pH. May also regulate nectar ascorbate concentration, protecting floral tissues from free radical damage.
Nicotiana langsdorffii x Nicotiana sanderae (taxid: 164110)
EC: 4EC: .EC: 2EC: .EC: 1EC: .EC: 1
>sp|Q50940|CAH_NEIGO Carbonic anhydrase OS=Neisseria gonorrhoeae GN=cah PE=1 SV=2 Back     alignment and function description
>sp|Q6DAJ6|CAH_ERWCT Carbonic anhydrase OS=Erwinia carotovora subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672) GN=cah PE=3 SV=1 Back     alignment and function description
>sp|O52538|CAH_ERWCA Carbonic anhydrase OS=Erwinia carotovora GN=cah PE=3 SV=1 Back     alignment and function description
>sp|P94170|CAH_NOSS1 Carbonic anhydrase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=ecaA PE=3 SV=1 Back     alignment and function description
>sp|O52535|CAH_KLEPN Carbonic anhydrase OS=Klebsiella pneumoniae GN=cah PE=3 SV=1 Back     alignment and function description
>sp|P48282|CAH1_SHEEP Carbonic anhydrase 1 OS=Ovis aries GN=CA1 PE=2 SV=2 Back     alignment and function description
>sp|Q1LZA1|CAH1_BOVIN Carbonic anhydrase 1 OS=Bos taurus GN=CA1 PE=2 SV=3 Back     alignment and function description
>sp|P13634|CAH1_MOUSE Carbonic anhydrase 1 OS=Mus musculus GN=Ca1 PE=2 SV=4 Back     alignment and function description
>sp|Q92051|CAHZ_DANRE Carbonic anhydrase OS=Danio rerio GN=cahz PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query275
359478710274 PREDICTED: bifunctional monodehydroascor 0.996 1.0 0.682 1e-111
255577068274 carbonic anhydrase, putative [Ricinus co 0.996 1.0 0.704 1e-110
224106798240 predicted protein [Populus trichocarpa] 0.872 1.0 0.770 1e-109
255577070272 carbonic anhydrase, putative [Ricinus co 0.894 0.904 0.757 1e-108
224132524240 predicted protein [Populus trichocarpa] 0.872 1.0 0.745 1e-106
356547165274 PREDICTED: bifunctional monodehydroascor 0.941 0.945 0.671 1e-104
356541924255 PREDICTED: LOW QUALITY PROTEIN: bifuncti 0.927 1.0 0.628 6e-94
297849106275 carbonic anhydrase family protein [Arabi 0.938 0.938 0.615 2e-93
15223122275 carbonic anhydrase [Arabidopsis thaliana 0.938 0.938 0.615 3e-93
449443578269 PREDICTED: bifunctional monodehydroascor 0.967 0.988 0.590 5e-92
>gi|359478710|ref|XP_002282495.2| PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Vitis vinifera] gi|297746283|emb|CBI16339.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 187/274 (68%), Positives = 227/274 (82%)

Query: 1   MEKIPIQVLFCCFFVVLLLLSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKN 60
           MEK+   +L C FF+VL+L +  AISQEV+DE EF+YE+G + GP KWG++H EWS CK+
Sbjct: 1   MEKLMTHILLCSFFIVLVLHACPAISQEVEDEKEFDYEKGSDKGPDKWGEIHEEWSTCKH 60

Query: 61  GRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYV 120
           G MQSPIDLL+ERVQVVSHLGRL+RSYKPS ATLKNRGHDM L WEG AG+++INGT+Y 
Sbjct: 61  GNMQSPIDLLHERVQVVSHLGRLQRSYKPSQATLKNRGHDMKLSWEGDAGSIQINGTKYE 120

Query: 121 LQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQV 180
           L+QCHWHSPSEHT+NG+RF LE HM+H +  GK +VVGIMYKIGR DSFL +++DHL  +
Sbjct: 121 LKQCHWHSPSEHTVNGKRFDLELHMLHETPSGKTSVVGIMYKIGRADSFLSTLTDHLEAL 180

Query: 181 AGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSL 240
           + S+++E   GV+DPR IKIGSRKYYRY+GSLT PPCTE+V+WTIV KVRTVTREQV  L
Sbjct: 181 SDSSDQERDVGVVDPRHIKIGSRKYYRYMGSLTTPPCTEDVIWTIVNKVRTVTREQVNLL 240

Query: 241 RVAVHDESDTNARPQQPINLRIVKSYRPDDENQN 274
           RVAVHD+S +NARP QPIN R V  YRP  E++N
Sbjct: 241 RVAVHDDSGSNARPIQPINRRSVHFYRPRVEDKN 274




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577068|ref|XP_002529418.1| carbonic anhydrase, putative [Ricinus communis] gi|223531095|gb|EEF32944.1| carbonic anhydrase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224106798|ref|XP_002314288.1| predicted protein [Populus trichocarpa] gi|222850696|gb|EEE88243.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255577070|ref|XP_002529419.1| carbonic anhydrase, putative [Ricinus communis] gi|223531096|gb|EEF32945.1| carbonic anhydrase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224132524|ref|XP_002328312.1| predicted protein [Populus trichocarpa] gi|222837827|gb|EEE76192.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356547165|ref|XP_003541987.1| PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Glycine max] Back     alignment and taxonomy information
>gi|356541924|ref|XP_003539422.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Glycine max] Back     alignment and taxonomy information
>gi|297849106|ref|XP_002892434.1| carbonic anhydrase family protein [Arabidopsis lyrata subsp. lyrata] gi|297338276|gb|EFH68693.1| carbonic anhydrase family protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15223122|ref|NP_172287.1| carbonic anhydrase [Arabidopsis thaliana] gi|21689637|gb|AAM67440.1| putative storage protein [Arabidopsis thaliana] gi|332190119|gb|AEE28240.1| carbonic anhydrase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449443578|ref|XP_004139554.1| PREDICTED: bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query275
TAIR|locus:2205175275 ACA7 "alpha carbonic anhydrase 0.901 0.901 0.646 6e-87
TAIR|locus:2827099277 ACA5 "alpha carbonic anhydrase 0.876 0.870 0.551 2.3e-71
TAIR|locus:2062819217 ACA2 "alpha carbonic anhydrase 0.752 0.953 0.625 2.9e-71
UNIPROTKB|Q84UV8274 NEC3 "Bifunctional monodehydro 0.872 0.875 0.563 9.9e-71
TAIR|locus:2133119267 ACA4 "alpha carbonic anhydrase 0.865 0.891 0.504 3.6e-66
TAIR|locus:2133129260 ACA6 "alpha carbonic anhydrase 0.727 0.769 0.485 3.3e-56
TAIR|locus:2146723277 ACA3 "alpha carbonic anhydrase 0.912 0.906 0.433 1.8e-55
TAIR|locus:2161043350 ACA8 "alpha carbonic anhydrase 0.629 0.494 0.497 1.1e-54
TAIR|locus:2083213284 ACA1 "alpha carbonic anhydrase 0.858 0.830 0.409 8.8e-47
UNIPROTKB|Q1LZA1261 CA1 "Carbonic anhydrase 1" [Bo 0.490 0.517 0.322 3.7e-29
TAIR|locus:2205175 ACA7 "alpha carbonic anhydrase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 869 (311.0 bits), Expect = 6.0e-87, P = 6.0e-87
 Identities = 161/249 (64%), Positives = 194/249 (77%)

Query:    21 SGTAISQ-EVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSH 79
             S  A S  EV+DE EFNY++  E GP +WG+L  EW  C  G MQSPIDL+NERV +VSH
Sbjct:    25 SSAASSHGEVEDEREFNYKKNDEKGPERWGELKPEWEMCGKGEMQSPIDLMNERVNIVSH 84

Query:    80 LGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRF 139
             LGRL R Y PSNATLKNRGHD+ML++E GAGT++ING EY LQQ HWHSPSEHTING+RF
Sbjct:    85 LGRLNRDYNPSNATLKNRGHDIMLKFEDGAGTIKINGFEYELQQLHWHSPSEHTINGRRF 144

Query:   140 ALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIK 199
             ALE HMVH  ++ ++AVV ++YKIGR D+F+ S+   L  +A   E E   G+IDP  IK
Sbjct:   145 ALELHMVHEGRNRRMAVVTVLYKIGRADTFIRSLEKELEGIAEMEEAEKNVGMIDPTKIK 204

Query:   200 IGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPIN 259
             IGSRKYYRY GSLT PPCT+NV W++VRKVRTVTR+QV+ LRVAVHD++++NARP QP N
Sbjct:   205 IGSRKYYRYTGSLTTPPCTQNVTWSVVRKVRTVTRKQVKLLRVAVHDDANSNARPVQPTN 264

Query:   260 LRIVKSYRP 268
              RIV  YRP
Sbjct:   265 KRIVHLYRP 273




GO:0004089 "carbonate dehydratase activity" evidence=IEA;ISS
GO:0006730 "one-carbon metabolic process" evidence=IEA;ISS
GO:0008270 "zinc ion binding" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM
TAIR|locus:2827099 ACA5 "alpha carbonic anhydrase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2062819 ACA2 "alpha carbonic anhydrase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q84UV8 NEC3 "Bifunctional monodehydroascorbate reductase and carbonic anhydrase nectarin-3" [Nicotiana langsdorffii x Nicotiana sanderae (taxid:164110)] Back     alignment and assigned GO terms
TAIR|locus:2133119 ACA4 "alpha carbonic anhydrase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2133129 ACA6 "alpha carbonic anhydrase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2146723 ACA3 "alpha carbonic anhydrase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161043 ACA8 "alpha carbonic anhydrase 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083213 ACA1 "alpha carbonic anhydrase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q1LZA1 CA1 "Carbonic anhydrase 1" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84UV8NEC3_NICLS4, ., 2, ., 1, ., 10.55070.91270.9160N/Ano
P94170CAH_NOSS14, ., 2, ., 1, ., 10.33330.80360.8371yesno
Q50940CAH_NEIGO4, ., 2, ., 1, ., 10.33860.86900.9484yesno
Q6DAJ6CAH_ERWCT4, ., 2, ., 1, ., 10.3040.86540.9754yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.2.10.963
3rd Layer1.6.50.963
4th Layer4.2.1.10.946

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
cd03124216 cd03124, alpha_CA_prokaryotic_like, Carbonic anhyd 1e-99
PLN02179235 PLN02179, PLN02179, carbonic anhydrase 4e-85
cd00326227 cd00326, alpha_CA, Carbonic anhydrase alpha (verte 3e-72
smart01057247 smart01057, Carb_anhydrase, Eukaryotic-type carbon 8e-68
PLN02202284 PLN02202, PLN02202, carbonate dehydratase 1e-64
COG3338250 COG3338, Cah, Carbonic anhydrase [Inorganic ion tr 7e-62
pfam00194238 pfam00194, Carb_anhydrase, Eukaryotic-type carboni 2e-37
cd03117234 cd03117, alpha_CA_IV_XV_like, Carbonic anhydrase a 4e-34
cd03119259 cd03119, alpha_CA_I_II_III_XIII, Carbonic anhydras 5e-34
cd03123248 cd03123, alpha_CA_VI_IX_XII_XIV, Carbonic anhydras 6e-34
cd03125249 cd03125, alpha_CA_VI, Carbonic anhydrase alpha, is 3e-28
cd03121256 cd03121, alpha_CARP_X_XI_like, Carbonic anhydrase 3e-28
cd03122253 cd03122, alpha_CARP_receptor_like, Carbonic anhydr 7e-27
cd03126249 cd03126, alpha_CA_XII_XIV, Carbonic anhydrase alph 2e-26
cd03150247 cd03150, alpha_CA_IX, Carbonic anhydrase alpha, is 1e-24
cd03149236 cd03149, alpha_CA_VII, Carbonic anhydrase alpha, C 7e-24
cd03118236 cd03118, alpha_CA_V, Carbonic anhydrase alpha, CA 2e-20
cd03120256 cd03120, alpha_CARP_VIII, Carbonic anhydrase alpha 4e-17
>gnl|CDD|239398 cd03124, alpha_CA_prokaryotic_like, Carbonic anhydrase alpha, prokaryotic-like subfamily Back     alignment and domain information
 Score =  289 bits (743), Expect = 1e-99
 Identities = 98/220 (44%), Positives = 143/220 (65%), Gaps = 6/220 (2%)

Query: 44  GPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMML 103
           GP  WG L  E++ C  G+ QSPID+  + V V   L  L  +YKP++ATL N GH + +
Sbjct: 1   GPEHWGNLDPEFALCATGKNQSPIDITTKAV-VSDKLPPLNYNYKPTSATLVNNGHTIQV 59

Query: 104 QWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKI 163
            +EG  GTL I+G  Y L Q H+HSPSEH ING+R+ LEAH+VH S+DG++AVV ++++ 
Sbjct: 60  NFEGNGGTLTIDGETYQLLQFHFHSPSEHLINGKRYPLEAHLVHKSKDGQLAVVAVLFEE 119

Query: 164 GRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLW 223
           G+ + FL+ I D++ +  G+     +  ++DP  +   SR YYRY GSLT PPC+E V W
Sbjct: 120 GKENPFLKKILDNMPKKEGTE--VNLPAILDPNELLPESRSYYRYEGSLTTPPCSEGVRW 177

Query: 224 TIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIV 263
            ++++  T+++EQ+   R AV+     NARP QP+N R V
Sbjct: 178 IVLKQPITISKEQLAKFRAAVY---PNNARPVQPLNGREV 214


Carbonic anhydrases (CAs) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism: a nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. Most alpha CAs are monomeric enzymes. The zinc ion is complexed by three histidines. This sub-family includes bacterial carbonic anhydrase alpha, as well as plant enzymes such as tobacco nectarin III and yam dioscorin and, carbonic anhydrases from molluscs, such as nacrein, which are part of the organic matrix layer in shells. Other members of this family may be involved in maintaining pH balance, in facilitating transport of carbon dioxide or carbonic acid, or in sensing carbon dioxide levels in the environment. Dioscorin is the major storage protein of yam tubers and may play a role as an antioxidant. Tobacco Nectarin may play a role in the maintenace of pH and oxidative balance in nectar. Mollusc nacrein may participate in calcium carbonate crystal formation of the nacreous layer. This subfamily also includes three alpha carbonic anhydrases from Chlamydomonas reinhardtii (CAH 1-3). CAHs1-2 are localized in the periplasmic space. CAH1 faciliates the movement of carbon dioxide across the plasma membrane when the medium is alkaline. CAH3 is localized to the thylakoid lumen and provides CO2 to Rubisco. Length = 216

>gnl|CDD|177835 PLN02179, PLN02179, carbonic anhydrase Back     alignment and domain information
>gnl|CDD|238200 cd00326, alpha_CA, Carbonic anhydrase alpha (vertebrate-like) group Back     alignment and domain information
>gnl|CDD|215000 smart01057, Carb_anhydrase, Eukaryotic-type carbonic anhydrase Back     alignment and domain information
>gnl|CDD|177853 PLN02202, PLN02202, carbonate dehydratase Back     alignment and domain information
>gnl|CDD|225875 COG3338, Cah, Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|201071 pfam00194, Carb_anhydrase, Eukaryotic-type carbonic anhydrase Back     alignment and domain information
>gnl|CDD|239391 cd03117, alpha_CA_IV_XV_like, Carbonic anhydrase alpha, CA_IV, CA_XV, like isozymes Back     alignment and domain information
>gnl|CDD|239393 cd03119, alpha_CA_I_II_III_XIII, Carbonic anhydrase alpha, isozymes I, II, and III and XIII Back     alignment and domain information
>gnl|CDD|239397 cd03123, alpha_CA_VI_IX_XII_XIV, Carbonic anhydrase alpha, isozymes VI, IX, XII and XIV Back     alignment and domain information
>gnl|CDD|239399 cd03125, alpha_CA_VI, Carbonic anhydrase alpha, isozyme VI Back     alignment and domain information
>gnl|CDD|239395 cd03121, alpha_CARP_X_XI_like, Carbonic anhydrase alpha related protein: groups X, XI and related proteins Back     alignment and domain information
>gnl|CDD|239396 cd03122, alpha_CARP_receptor_like, Carbonic anhydrase alpha related protein, receptor_like subfamily Back     alignment and domain information
>gnl|CDD|239400 cd03126, alpha_CA_XII_XIV, Carbonic anhydrase alpha, isozymes XII and XIV Back     alignment and domain information
>gnl|CDD|239403 cd03150, alpha_CA_IX, Carbonic anhydrase alpha, isozyme IX Back     alignment and domain information
>gnl|CDD|239402 cd03149, alpha_CA_VII, Carbonic anhydrase alpha, CA isozyme VII_like subgroup Back     alignment and domain information
>gnl|CDD|239392 cd03118, alpha_CA_V, Carbonic anhydrase alpha, CA isozyme V_like subgroup Back     alignment and domain information
>gnl|CDD|239394 cd03120, alpha_CARP_VIII, Carbonic anhydrase alpha related protein, group VIII Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 275
PLN02202284 carbonate dehydratase 100.0
COG3338250 Cah Carbonic anhydrase [Inorganic ion transport an 100.0
cd03124216 alpha_CA_prokaryotic_like Carbonic anhydrase alpha 100.0
cd03121256 alpha_CARP_X_XI_like Carbonic anhydrase alpha rela 100.0
cd03119259 alpha_CA_I_II_III_XIII Carbonic anhydrase alpha, i 100.0
PF00194256 Carb_anhydrase: Eukaryotic-type carbonic anhydrase 100.0
cd03126249 alpha_CA_XII_XIV Carbonic anhydrase alpha, isozyme 100.0
cd03125249 alpha_CA_VI Carbonic anhydrase alpha, isozyme VI. 100.0
cd03122253 alpha_CARP_receptor_like Carbonic anhydrase alpha 100.0
cd03123248 alpha_CA_VI_IX_XII_XIV Carbonic anhydrase alpha, i 100.0
cd03150247 alpha_CA_IX Carbonic anhydrase alpha, isozyme IX. 100.0
cd03149236 alpha_CA_VII Carbonic anhydrase alpha, CA isozyme 100.0
cd03118236 alpha_CA_V Carbonic anhydrase alpha, CA isozyme V_ 100.0
cd03120256 alpha_CARP_VIII Carbonic anhydrase alpha related p 100.0
PLN02179235 carbonic anhydrase 100.0
KOG0382262 consensus Carbonic anhydrase [General function pre 100.0
cd03117234 alpha_CA_IV_XV_like Carbonic anhydrase alpha, CA_I 100.0
cd00326227 alpha_CA Carbonic anhydrase alpha (vertebrate-like 100.0
>PLN02202 carbonate dehydratase Back     alignment and domain information
Probab=100.00  E-value=1.8e-75  Score=530.34  Aligned_cols=258  Identities=40%  Similarity=0.755  Sum_probs=220.2

Q ss_pred             HHHHHHHHHHHHHhccccccccCCCCCcccCCCCCCCCCCccccCcCcccCCCCCCCCCceecCCceeeeccCCCccccc
Q 046862            8 VLFCCFFVVLLLLSGTAISQEVDDEIEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSY   87 (275)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~w~Y~~~~~~gP~~W~~~~~~~~~C~~G~~QSPInI~~~~~~~~~~l~~l~~~y   87 (275)
                      |+-.++++++++|+++++++  +++.+|+|.  +.+||++|+.++++|..|++|++||||||.+..+...+.+.+|.++|
T Consensus         6 m~~~~~~~~~~~~~~~~~~~--~~~~~w~Y~--~~~GP~~W~~l~~~~~~C~~G~~QSPIdI~~~~~~~~~~l~~l~~~~   81 (284)
T PLN02202          6 MIKLCFFAIALICIAPADAQ--TEGVVFGYK--GKNGPNQWGHLNPHFTKCAVGKLQSPIDIQRRQIFYNHKLESIHRDY   81 (284)
T ss_pred             HHHHHHHHHHHHHHHhhhcc--cCCCCcCCC--CCCChhhhhhcCcchhhccCCCccCCEeecCCccccCCCCCceeeec
Confidence            55444666666666653333  344689995  67899999999999999999999999999987665567778888888


Q ss_pred             cCCccEEeecCeeeEEEeeCCCceEEEcCeEEEEeeeEecCCCCCccccccccceeeeeeecCCCceEEEEEEEecCCCC
Q 046862           88 KPSNATLKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPD  167 (275)
Q Consensus        88 ~~~~~~l~N~G~tv~v~~~~~~~~~~i~G~~Y~l~q~HfH~gSEHtidG~~~~~E~HiVh~~~~~~laVl~v~~~~~~~n  167 (275)
                      ....+++.|+||++++.+.++.+.+.++|.+|.|.||||||||||+|||++|||||||||++.++++|||||||++|.+|
T Consensus        82 ~~~~~~l~N~Ghtv~v~~~~~~~~~~~~g~~Y~L~QfHFH~gSEH~idG~~yp~E~H~VH~~~~g~laVlgv~~~~g~~n  161 (284)
T PLN02202         82 YFTNATLVNHVCNVAMFFGEGAGDVIIDNKNYTLLQMHWHTPSEHHLHGVQYAAELHMVHQAKDGSFAVVASLFKIGTEE  161 (284)
T ss_pred             cCCceEEEECCccEEEEEcCCCCeeEECCcEEEEEEEEecCCcccEECCeeCCeEEEEEEEcCCCCEEEEEEEEeccCCC
Confidence            76778999999999999965456788999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhhcCC--CCc---eeEecccCCCCCCCCCcceEEEeecccCCCCccceEEEEeceeeccCHHHHHHHHH
Q 046862          168 SFLESISDHLTQVAGS--NER---ETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRV  242 (275)
Q Consensus       168 ~~l~~i~~~l~~i~~~--~~~---~~~~~~~~l~~L~~~~~~yy~Y~GSLTtPPCsE~V~WiV~~~pi~IS~~Ql~~fr~  242 (275)
                      ++++.+++.+..+...  .+.   ...+..|++..|+|...+||+|.||||||||+|+|+|+||++|++||.+||++||+
T Consensus       162 ~~l~~i~~~l~~i~~~~~~~~~~~~~~~~~~~~~~llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~IS~~Ql~~fr~  241 (284)
T PLN02202        162 PFLSQMKDKLVKLKEERFKGNHTAQVEVGKIDTRHIERKTRKYFRYIGSLTTPPCSENVSWTILGKVRSMSKEQVELLRS  241 (284)
T ss_pred             hHHHHHHHHHHHhhcccccCcccccccccccCHHHhCccccceEEEeccccCCCCCCceEEEEeCceEEcCHHHHHHHHH
Confidence            9999999988877431  111   11234678888888889999999999999999999999999999999999999999


Q ss_pred             hccCCCCCCCCCCCCCCCCeEEEeCCC
Q 046862          243 AVHDESDTNARPQQPINLRIVKSYRPD  269 (275)
Q Consensus       243 l~~~~~~~N~Rp~Qpln~R~V~~~~~~  269 (275)
                      +....+.+|+||+||||||.|+++.+.
T Consensus       242 ~~~~~l~~N~RpvQplngR~V~~~~~~  268 (284)
T PLN02202        242 PLDKSFKNNSRPCQPLNGRRVEMFHDH  268 (284)
T ss_pred             hhhcccCCCCCCCCCCCCCEEEEecCe
Confidence            876557899999999999999988653



>COG3338 Cah Carbonic anhydrase [Inorganic ion transport and metabolism] Back     alignment and domain information
>cd03124 alpha_CA_prokaryotic_like Carbonic anhydrase alpha, prokaryotic-like subfamily Back     alignment and domain information
>cd03121 alpha_CARP_X_XI_like Carbonic anhydrase alpha related protein: groups X, XI and related proteins Back     alignment and domain information
>cd03119 alpha_CA_I_II_III_XIII Carbonic anhydrase alpha, isozymes I, II, and III and XIII Back     alignment and domain information
>PF00194 Carb_anhydrase: Eukaryotic-type carbonic anhydrase; InterPro: IPR001148 Carbonic anhydrases (CA: 4 Back     alignment and domain information
>cd03126 alpha_CA_XII_XIV Carbonic anhydrase alpha, isozymes XII and XIV Back     alignment and domain information
>cd03125 alpha_CA_VI Carbonic anhydrase alpha, isozyme VI Back     alignment and domain information
>cd03122 alpha_CARP_receptor_like Carbonic anhydrase alpha related protein, receptor_like subfamily Back     alignment and domain information
>cd03123 alpha_CA_VI_IX_XII_XIV Carbonic anhydrase alpha, isozymes VI, IX, XII and XIV Back     alignment and domain information
>cd03150 alpha_CA_IX Carbonic anhydrase alpha, isozyme IX Back     alignment and domain information
>cd03149 alpha_CA_VII Carbonic anhydrase alpha, CA isozyme VII_like subgroup Back     alignment and domain information
>cd03118 alpha_CA_V Carbonic anhydrase alpha, CA isozyme V_like subgroup Back     alignment and domain information
>cd03120 alpha_CARP_VIII Carbonic anhydrase alpha related protein, group VIII Back     alignment and domain information
>PLN02179 carbonic anhydrase Back     alignment and domain information
>KOG0382 consensus Carbonic anhydrase [General function prediction only] Back     alignment and domain information
>cd03117 alpha_CA_IV_XV_like Carbonic anhydrase alpha, CA_IV, CA_XV, like isozymes Back     alignment and domain information
>cd00326 alpha_CA Carbonic anhydrase alpha (vertebrate-like) group Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
1kop_A223 Neisseria Gonorrhoeae Carbonic Anhydrase Length = 2 1e-36
3uyq_A260 Hca 3 Length = 260 1e-22
2hfw_A260 Structural And Kinetic Analysis Of Proton Shuttle R 1e-22
1flj_A260 Crystal Structure Of S-Glutathiolated Carbonic Anhy 3e-22
1z97_A266 Human Carbonic Anhydrase Iii: Structural And Kineti 6e-22
2foy_A260 Human Carbonic Anhydrase I Complexed With A Two-Pro 6e-22
1j9w_A260 Solution Structure Of The Cai Michigan 1 Variant Le 7e-22
1crm_A260 Structure And Function Of Carbonic Anhydrases Lengt 7e-22
2it4_A256 X Ray Structure Of The Complex Between Carbonic Anh 8e-22
3q31_A244 Structure Of Fungal Alpha Carbonic Anhydrase From A 1e-21
3uyn_A260 Hca 3 Length = 260 1e-21
1z93_A266 Human Carbonic Anhydrase Iii:structural And Kinetic 1e-21
3ryv_B259 Carbonic Anhydrase Complexed With N-Ethyl-4-Sulfamo 3e-21
3ml5_A269 Crystal Structure Of The C183sC217S MUTANT OF HUMAN 3e-21
1hva_A260 Engineering The Zinc Binding Site Of Human Carbonic 4e-21
1cnb_A259 Compensatory Plastic Effects In The Redesign Of Pro 4e-21
3fe4_A278 Crystal Structure Of Human Carbonic Anhydrase Vi Le 5e-21
1jcz_A263 Crystal Structure Of The Extracellular Domain Of Hu 5e-21
2nwy_A260 Structural And Kinetic Effects Of Hydrophobic Mutat 5e-21
3mdz_A281 Crystal Structure Of Human Carbonic Anhydrase Vii [ 7e-21
4bcw_A257 Carbonic Anhydrase Ix Mimic In Complex With (e)-2-( 9e-21
3pjj_A259 Synthetic Dimer Of Human Carbonic Anhydrase Ii Leng 9e-21
3v3i_B260 Kinetic And Structural Studies Of Thermostabilized 1e-20
3dbu_A260 Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, 1e-20
3v3j_A260 Kinetic And Structural Studies Of Thermostabilized 1e-20
3v3f_A260 Kinetic And Structural Studies Of Thermostabilized 1e-20
2foq_A260 Human Carbonic Anhydrase Ii Complexed With Two-Pron 1e-20
3rg4_A260 Crystal Structure Of The W5f Mutant Of Human Carbon 1e-20
3tvo_X258 Human Carbonic Anhydrase Ii Proton Transfer Double 1e-20
3tvn_X258 Human Carbonic Anhydrase Ii Proton Transfer Mutant 1e-20
1zh9_A259 Carbonic Anhydrase Ii In Complex With N-4-methyl-1- 1e-20
3mnh_A260 Human Carbonic Anhydrase Ii Mutant K170a Length = 2 1e-20
3rg3_A260 Crystal Structure Of The W5e Mutant Of Human Carbon 2e-20
3da2_A262 X-Ray Structure Of Human Carbonic Anhydrase 13 In C 2e-20
3v3g_B260 Kinetic And Structural Studies Of Thermostabilized 2e-20
1ugd_A258 Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mu 2e-20
3czv_A264 Crystal Structure Of The Human Carbonic Anhydrase X 2e-20
3mni_A260 Human Carbonic Anhydrase Ii Mutant K170d Length = 2 2e-20
4g0c_A257 Neutron Structure Of Acetazolamide-Bound Human Carb 2e-20
2nxr_A260 Structural Effects Of Hydrophobic Mutations On The 2e-20
1lzv_A260 Site-Specific Mutant (Tyr7 Replaced With His) Of Hu 2e-20
3rge_A260 Crystal Structure Of The W5h Mutant Of Human Carbon 2e-20
1th9_A260 Effect Of Shuttle Location And Ph Environment On H+ 2e-20
3rld_A260 Crystal Structure Of The Y7i Mutant Of Human Carbon 2e-20
3mnj_A260 Human Carbonic Anhydrase Ii Mutant K170e Length = 2 2e-20
1ugf_A258 Human Carbonic Anhydrase Ii [hcaii] (E.C.4.2.1.1) M 2e-20
3pyk_A260 Human Carbonic Anhydrase Ii As Host For Pianostool 2e-20
3v3h_B260 Kinetic And Structural Studies Of Thermostabilized 2e-20
2cbe_A260 Structure Of Native And Apo Carbonic Anhydrase Ii A 2e-20
1f2w_A259 The Mechanism Of Cyanamide Hydration Catalyzed By C 2e-20
3kkx_A260 Neutron Structure Of Human Carbonic Anhydrase Ii Le 2e-20
2pov_A259 The Crystal Structure Of The Human Carbonic Anhydra 2e-20
1g6v_A260 Complex Of The Camelid Heavy-Chain Antibody Fragmen 2e-20
3tmj_A258 Joint X-RayNEUTRON STRUCTURE OF HUMAN CARBONIC ANHY 2e-20
3r16_A257 Human Caii Bound To N-(4-Sulfamoylphenyl)-2-(Thioph 2e-20
1tg3_A260 Effect Of Shuttle Location And Ph Environment On H+ 2e-20
1xpz_A258 Structure Of Human Carbonic Anhydrase Ii With 4-[4- 2e-20
1g3z_A259 Carbonic Anhydrase Ii (F131v) Length = 259 2e-20
1ugc_A258 Human Carbonic Anhydrase Ii [hcaii] (e.c.4.2.1.1) M 2e-20
1ugb_A258 Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mu 2e-20
3m1k_A265 Carbonic Anhydrase In Complex With Fragment Length 2e-20
3dvc_A259 X-Ray Crystal Structure Of Mutant N62t Of Human Car 2e-20
3mnk_A260 Human Carbonic Anhydrase Ii Mutant K170h Length = 2 2e-20
3dvd_A259 X-Ray Crystal Structure Of Mutant N62d Of Human Car 2e-20
3dv7_A259 Role Of Hydrophilic Residues In Proton Transfer Dur 3e-20
2nwo_A260 Structural And Kinetic Effect Of Hydrophobic Mutati 3e-20
1uga_A258 Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mu 3e-20
3u3a_X260 Structure Of Human Carbonic Anhydrase Ii V143i Leng 3e-20
1cnk_A259 X-Ray Crystallographic Studies Of Engineered Hydrog 3e-20
3dvb_A259 X-Ray Crystal Structure Of Mutant N62v Human Carbon 3e-20
5ca2_A260 Conformational Mobility Of His-64 In The Thr-200 (R 3e-20
1uge_A258 Human Carbonic Anhydrase Ii [hcaii] (E.C.4.2.1.1) M 4e-20
3u47_A260 Human Carbonic Anhydrase Ii V143l Length = 260 4e-20
1cvc_A259 Redesigning The Zinc Binding Site Of Human Carbonic 4e-20
1lg5_A260 Crystal Structure Analysis Of The Hca Ii Mutant T19 4e-20
1fql_A260 X-Ray Crystal Structure Of Zinc-Bound F95mW97V CARB 4e-20
1fqm_A260 X-Ray Crystal Structure Of Zinc-Bound F93iF95MW97V 4e-20
1h4n_A259 H94n Carbonic Anhydrase Ii Complexed With Tris Leng 4e-20
1fr7_A260 X-Ray Crystal Structure Of Zinc-Bound F93sF95LW97M 4e-20
1ydb_A259 Structural Basis Of Inhibitor Affinity To Variants 4e-20
1caj_A259 Structural Analysis Of The Zinc Hydroxide-Thr 199-G 5e-20
6ca2_A260 Engineering The Hydrophobic Pocket Of Carbonic Anhy 5e-20
1bic_A259 Crystallographic Analysis Of Thr-200-> His Human Ca 5e-20
1cnh_A259 X-Ray Crystallographic Studies Of Engineered Hydrog 5e-20
1cvf_A259 Structural Consequences Of Redesigning A Protein-Zi 5e-20
1cak_A259 Structural Analysis Of The Zinc Hydroxide-Thr 199-G 5e-20
1zsa_A259 Carbonic Anhydrase Ii Mutant E117q, Apo Form Length 5e-20
3u45_X260 Human Carbonic Anhydrase Ii V143a Length = 260 6e-20
12ca_A260 Altering The Mouth Of A Hydrophobic Pocket. Structu 6e-20
1cal_A259 Structural Analysis Of The Zinc Hydroxide-Thr 199-G 7e-20
9ca2_A260 Engineering The Hydrophobic Pocket Of Carbonic Anhy 7e-20
1cva_A259 Structural And Functional Importance Of A Conserved 7e-20
1cnj_A259 X-Ray Crystallographic Studies Of Engineered Hydrog 8e-20
1dca_A260 Structure Of An Engineered Metal Binding Site In Hu 8e-20
1ccs_A259 Structure-Assisted Redesign Of A Protein-Zinc Bindi 9e-20
1cct_A259 Structure-Assisted Redesign Of A Protein-Zinc Bindi 9e-20
1hed_A260 Structural Consequences Of Hydrophilic Amino-Acid S 1e-19
1cai_A259 Structural Analysis Of The Zinc Hydroxide-Thr 199-G 1e-19
1cng_A259 X-Ray Crystallographic Studies Of Engineered Hydrog 1e-19
1cni_A259 X-Ray Crystallographic Studies Of Engineered Hydrog 1e-19
1cvh_A255 Structural Consequences Of Redesigning A Protein-Zi 1e-19
1ccu_A259 Structure-Assisted Redesign Of A Protein-Zinc Bindi 1e-19
1h9n_A259 H119n Carbonic Anhydrase Ii Length = 259 1e-19
1hea_A260 Carbonic Anhydrase Ii (Carbonate Dehydratase) (Hca 1e-19
1yda_A259 Structural Basis Of Inhibitor Affinity To Variants 1e-19
1h9q_A259 H119q Carbonic Anhydrase Ii Length = 259 1e-19
1ydd_A259 Structural Basis Of Inhibitor Affinity To Variants 1e-19
1heb_A260 Structural Consequences Of Hydrophilic Amino-Acid S 1e-19
7ca2_A260 Engineering The Hydrophobic Pocket Of Carbonic Anhy 1e-19
8ca2_A260 Engineering The Hydrophobic Pocket Of Carbonic Anhy 2e-19
1hec_A260 Structural Consequences Of Hydrophilic Amino-Acid S 2e-19
1mua_A256 Structure And Energetics Of A Non-Proline Cis-Pepti 2e-19
1cve_A259 Structural Consequences Of Redesigning A Protein-Zi 2e-19
1g0e_A260 Site-Specific Mutant (His64 Replaced With Ala) Of H 2e-19
2fnn_A260 Activation Of Human Carbonic Anhydrase Ii By Exogen 3e-19
3m1q_A265 Carbonic Anhydrase Ii Mutant W5c-H64c With Opened D 3e-19
1cvd_A255 Structural Consequences Of Redesigning A Protein-Zi 3e-19
2fnk_A260 Activation Of Human Carbonic Anhydrase Ii By Exogen 3e-19
3kig_A265 Mutant Carbonic Anhydrase Ii In Complex With An Azi 3e-19
2fnm_A260 Activation Of Human Carbonic Anhdyrase Ii By Exogen 3e-19
1znc_A266 Human Carbonic Anhydrase Iv Length = 266 3e-19
1yo0_A260 Proton Transfer From His200 In Human Carbonic Anhyd 5e-19
3iai_A257 Crystal Structure Of The Catalytic Domain Of The Tu 4e-18
1v9i_C261 Crystal Structure Analysis Of The Site Specific Mut 4e-18
1v9e_A259 Crystal Structure Analysis Of Bovine Carbonic Anhyd 6e-18
1keq_A248 Crystal Structure Of F65aY131C CARBONIC ANHYDRASE V 7e-17
1dmx_A248 Murine Mitochondrial Carbonic Anyhdrase V At 2.45 A 9e-17
1urt_A248 Murine Carbonic Anhydrase V Length = 248 3e-16
1y7w_A291 Crystal Structure Of A Halotolerant Carbonic Anhydr 5e-16
3jxh_C265 Ca-Like Domain Of Human Ptprg Length = 265 4e-15
3jxg_B269 Ca-Like Domain Of Mouse Ptprg Length = 269 7e-15
2znc_A258 Murine Carbonic Anhydrase Iv Length = 258 9e-15
3b1b_A377 The Unique Structure Of Wild Type Carbonic Anhydras 1e-14
2w2j_A291 Crystal Structure Of The Human Carbonic Anhydrase R 2e-14
3jxf_A272 Ca-Like Domain Of Human Ptprz Length = 272 2e-11
3s97_A273 Ptprz Cntn1 Complex Length = 273 2e-11
1rj5_A261 Crystal Structure Of The Extracellular Domain Of Mu 4e-11
>pdb|1KOP|A Chain A, Neisseria Gonorrhoeae Carbonic Anhydrase Length = 223 Back     alignment and structure

Iteration: 1

Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust. Identities = 78/223 (34%), Positives = 120/223 (53%), Gaps = 9/223 (4%) Query: 41 GENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHD 100 G + P WG L E+ C G+ QSP+++ V L +K +YKPS ++N GH Sbjct: 8 GHDSPESWGNLSEEFRLCSTGKNQSPVNITE---TVSGKLPAIKVNYKPSMVDVENNGHT 64 Query: 101 MMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIM 160 + + + G TL +NG Y L+Q H+H PSE+ I G+ F +EAH VH+ ++ + V+ ++ Sbjct: 65 IQVNYPEGGNTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLVLAVL 124 Query: 161 YKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTIPPCTEN 220 Y+ G+ + L SI + + AG + + D + KYYR+ GSLT PPCTE Sbjct: 125 YEAGKTNGRLSSIWNVMPMTAG---KVKLNQPFDASTLLPKRLKYYRFAGSLTTPPCTEG 181 Query: 221 VLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIV 263 V W +++ + + Q AV E N RP QP+N R+V Sbjct: 182 VSWLVLKTYDHIDQAQAEKFTRAVGSE---NNRPVQPLNARVV 221
>pdb|3UYQ|A Chain A, Hca 3 Length = 260 Back     alignment and structure
>pdb|2HFW|A Chain A, Structural And Kinetic Analysis Of Proton Shuttle Residues In The Active Site Of Human Carbonic Anhydrase Iii Length = 260 Back     alignment and structure
>pdb|1FLJ|A Chain A, Crystal Structure Of S-Glutathiolated Carbonic Anhydrase Iii Length = 260 Back     alignment and structure
>pdb|1Z97|A Chain A, Human Carbonic Anhydrase Iii: Structural And Kinetic Study Of Catalysis And Proton Transfer Length = 266 Back     alignment and structure
>pdb|2FOY|A Chain A, Human Carbonic Anhydrase I Complexed With A Two-Prong Inhibitor Length = 260 Back     alignment and structure
>pdb|1J9W|A Chain A, Solution Structure Of The Cai Michigan 1 Variant Length = 260 Back     alignment and structure
>pdb|1CRM|A Chain A, Structure And Function Of Carbonic Anhydrases Length = 260 Back     alignment and structure
>pdb|2IT4|A Chain A, X Ray Structure Of The Complex Between Carbonic Anhydrase I And The Phosphonate Antiviral Drug Foscarnet Length = 256 Back     alignment and structure
>pdb|3Q31|A Chain A, Structure Of Fungal Alpha Carbonic Anhydrase From Aspergillus Oryzae Length = 244 Back     alignment and structure
>pdb|3UYN|A Chain A, Hca 3 Length = 260 Back     alignment and structure
>pdb|1Z93|A Chain A, Human Carbonic Anhydrase Iii:structural And Kinetic Study Of Catalysis And Proton Transfer Length = 266 Back     alignment and structure
>pdb|3RYV|B Chain B, Carbonic Anhydrase Complexed With N-Ethyl-4-Sulfamoylbenzamide Length = 259 Back     alignment and structure
>pdb|3ML5|A Chain A, Crystal Structure Of The C183sC217S MUTANT OF HUMAN CA VII IN COMPLEX With Acetazolamide Length = 269 Back     alignment and structure
>pdb|1HVA|A Chain A, Engineering The Zinc Binding Site Of Human Carbonic Anhydrase Ii: Structure Of The His-94-> Cys Apoenzyme In A New Crystalline Form Length = 260 Back     alignment and structure
>pdb|1CNB|A Chain A, Compensatory Plastic Effects In The Redesign Of Protein- Zinc Binding Sites Length = 259 Back     alignment and structure
>pdb|3FE4|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Vi Length = 278 Back     alignment and structure
>pdb|1JCZ|A Chain A, Crystal Structure Of The Extracellular Domain Of Human Carbonic Anhydrase Xii Length = 263 Back     alignment and structure
>pdb|2NWY|A Chain A, Structural And Kinetic Effects Of Hydrophobic Mutations On The Active Site Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|3MDZ|A Chain A, Crystal Structure Of Human Carbonic Anhydrase Vii [isoform 1], Ca7 Length = 281 Back     alignment and structure
>pdb|4BCW|A Chain A, Carbonic Anhydrase Ix Mimic In Complex With (e)-2-(5-bromo- 2-hydroxyphenyl)ethenesulfonic Acid Length = 257 Back     alignment and structure
>pdb|3PJJ|A Chain A, Synthetic Dimer Of Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|3V3I|B Chain B, Kinetic And Structural Studies Of Thermostabilized Mutants Of Hca Ii Length = 260 Back     alignment and structure
>pdb|3DBU|A Chain A, Use Of Carbonic Anhydrase Ii, Ix Active-Site Mimic, For The Purpose Of Screening Inhibitors For Possible Anti-Cancer Properties Length = 260 Back     alignment and structure
>pdb|3V3J|A Chain A, Kinetic And Structural Studies Of Thermostabilized Mutants Of Hca Ii Length = 260 Back     alignment and structure
>pdb|3V3F|A Chain A, Kinetic And Structural Studies Of Thermostabilized Mutants Of Hca Ii Length = 260 Back     alignment and structure
>pdb|2FOQ|A Chain A, Human Carbonic Anhydrase Ii Complexed With Two-Prong Inhibitors Length = 260 Back     alignment and structure
>pdb|3RG4|A Chain A, Crystal Structure Of The W5f Mutant Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|3TVO|X Chain X, Human Carbonic Anhydrase Ii Proton Transfer Double Mutant Length = 258 Back     alignment and structure
>pdb|3TVN|X Chain X, Human Carbonic Anhydrase Ii Proton Transfer Mutant Length = 258 Back     alignment and structure
>pdb|1ZH9|A Chain A, Carbonic Anhydrase Ii In Complex With N-4-methyl-1- Piperazinyl-n'-(p-sulfonamide)phenylthiourea As Sulfonamide Inhibitor Length = 259 Back     alignment and structure
>pdb|3MNH|A Chain A, Human Carbonic Anhydrase Ii Mutant K170a Length = 260 Back     alignment and structure
>pdb|3RG3|A Chain A, Crystal Structure Of The W5e Mutant Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|3DA2|A Chain A, X-Ray Structure Of Human Carbonic Anhydrase 13 In Complex With Inhibitor Length = 262 Back     alignment and structure
>pdb|3V3G|B Chain B, Kinetic And Structural Studies Of Thermostabilized Mutants Of Hca Ii Length = 260 Back     alignment and structure
>pdb|1UGD|A Chain A, Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mutant With Ala 65 Replaced By Ser (A65s) Length = 258 Back     alignment and structure
>pdb|3CZV|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Xiii In Complex With Acetazolamide Length = 264 Back     alignment and structure
>pdb|3MNI|A Chain A, Human Carbonic Anhydrase Ii Mutant K170d Length = 260 Back     alignment and structure
>pdb|4G0C|A Chain A, Neutron Structure Of Acetazolamide-Bound Human Carbonic Anhydrase Ii Reveal Molecular Details Of Drug Binding Length = 257 Back     alignment and structure
>pdb|2NXR|A Chain A, Structural Effects Of Hydrophobic Mutations On The Active Site Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1LZV|A Chain A, Site-Specific Mutant (Tyr7 Replaced With His) Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|3RGE|A Chain A, Crystal Structure Of The W5h Mutant Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1TH9|A Chain A, Effect Of Shuttle Location And Ph Environment On H+ Transfer In Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|3RLD|A Chain A, Crystal Structure Of The Y7i Mutant Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|3MNJ|A Chain A, Human Carbonic Anhydrase Ii Mutant K170e Length = 260 Back     alignment and structure
>pdb|1UGF|A Chain A, Human Carbonic Anhydrase Ii [hcaii] (E.C.4.2.1.1) Mutant With Ala 65 Replaced By Thr (A65t) Length = 258 Back     alignment and structure
>pdb|3PYK|A Chain A, Human Carbonic Anhydrase Ii As Host For Pianostool Complexes Bearing A Sulfonamide Anchor Length = 260 Back     alignment and structure
>pdb|3V3H|B Chain B, Kinetic And Structural Studies Of Thermostabilized Mutants Of Hca Ii Length = 260 Back     alignment and structure
>pdb|2CBE|A Chain A, Structure Of Native And Apo Carbonic Anhydrase Ii And Some Of Its Anion-Ligand Complexes Length = 260 Back     alignment and structure
>pdb|1F2W|A Chain A, The Mechanism Of Cyanamide Hydration Catalyzed By Carbonic Anhydrase Ii Revealed By Cryogenic X-Ray Diffraction Length = 259 Back     alignment and structure
>pdb|3KKX|A Chain A, Neutron Structure Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|2POV|A Chain A, The Crystal Structure Of The Human Carbonic Anhydrase Ii In Complex With 4-Amino-6-Chloro-Benzene-1,3-Disulfonamide Length = 259 Back     alignment and structure
>pdb|1G6V|A Chain A, Complex Of The Camelid Heavy-Chain Antibody Fragment Cab- Ca05 With Bovine Carbonic Anhydrase Length = 260 Back     alignment and structure
>pdb|3TMJ|A Chain A, Joint X-RayNEUTRON STRUCTURE OF HUMAN CARBONIC ANHYDRASE II AT PH 7.8 Length = 258 Back     alignment and structure
>pdb|3R16|A Chain A, Human Caii Bound To N-(4-Sulfamoylphenyl)-2-(Thiophen-2-Yl) Acetamide Length = 257 Back     alignment and structure
>pdb|1TG3|A Chain A, Effect Of Shuttle Location And Ph Environment On H+ Transfer In Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1XPZ|A Chain A, Structure Of Human Carbonic Anhydrase Ii With 4-[4-O- Sulfamoylbenzyl)(4-Cyanophenyl)amino]-4h-[1,2, 4]-Triazole Length = 258 Back     alignment and structure
>pdb|1G3Z|A Chain A, Carbonic Anhydrase Ii (F131v) Length = 259 Back     alignment and structure
>pdb|1UGC|A Chain A, Human Carbonic Anhydrase Ii [hcaii] (e.c.4.2.1.1) Mutant With Ala 65 Replaced By His (a65h) Length = 258 Back     alignment and structure
>pdb|1UGB|A Chain A, Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mutant With Ala 65 Replaced By Gly (A65g) Length = 258 Back     alignment and structure
>pdb|3M1K|A Chain A, Carbonic Anhydrase In Complex With Fragment Length = 265 Back     alignment and structure
>pdb|3DVC|A Chain A, X-Ray Crystal Structure Of Mutant N62t Of Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|3MNK|A Chain A, Human Carbonic Anhydrase Ii Mutant K170h Length = 260 Back     alignment and structure
>pdb|3DVD|A Chain A, X-Ray Crystal Structure Of Mutant N62d Of Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|3DV7|A Chain A, Role Of Hydrophilic Residues In Proton Transfer During Catalysis By Human Carbonic Anhydrase Ii (N62a) Length = 259 Back     alignment and structure
>pdb|2NWO|A Chain A, Structural And Kinetic Effect Of Hydrophobic Mutations In The Active Site Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1UGA|A Chain A, Human Carbonic Anhydrase Ii[hcaii] (E.C.4.2.1.1) Mutant With Ala 65 Replaced By Phe (A65f) Length = 258 Back     alignment and structure
>pdb|3U3A|X Chain X, Structure Of Human Carbonic Anhydrase Ii V143i Length = 260 Back     alignment and structure
>pdb|1CNK|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond Networks In A Protein-Zinc Binding Site Length = 259 Back     alignment and structure
>pdb|3DVB|A Chain A, X-Ray Crystal Structure Of Mutant N62v Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|5CA2|A Chain A, Conformational Mobility Of His-64 In The Thr-200 (Right Arrow) Ser Mutant Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1UGE|A Chain A, Human Carbonic Anhydrase Ii [hcaii] (E.C.4.2.1.1) Mutant With Ala 65 Replaced By Leu (A65l) Length = 258 Back     alignment and structure
>pdb|3U47|A Chain A, Human Carbonic Anhydrase Ii V143l Length = 260 Back     alignment and structure
>pdb|1CVC|A Chain A, Redesigning The Zinc Binding Site Of Human Carbonic Anhydrase Ii: Structure Of A His2asp-Zn2+ Metal Coordination Polyhedron Length = 259 Back     alignment and structure
>pdb|1LG5|A Chain A, Crystal Structure Analysis Of The Hca Ii Mutant T199p In Complex With Beta-Mercaptoethanol Length = 260 Back     alignment and structure
>pdb|1FQL|A Chain A, X-Ray Crystal Structure Of Zinc-Bound F95mW97V CARBONIC Anhydrase (Caii) Variant Length = 260 Back     alignment and structure
>pdb|1FQM|A Chain A, X-Ray Crystal Structure Of Zinc-Bound F93iF95MW97V Carbonic Anhydrase (Caii) Variant Length = 260 Back     alignment and structure
>pdb|1H4N|A Chain A, H94n Carbonic Anhydrase Ii Complexed With Tris Length = 259 Back     alignment and structure
>pdb|1FR7|A Chain A, X-Ray Crystal Structure Of Zinc-Bound F93sF95LW97M Carbonic Anhydrase (Caii) Variant Length = 260 Back     alignment and structure
>pdb|1YDB|A Chain A, Structural Basis Of Inhibitor Affinity To Variants Of Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1CAJ|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106 Hydrogen Bonding Network In Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|6CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1BIC|A Chain A, Crystallographic Analysis Of Thr-200-> His Human Carbonic Anhydrase Ii And Its Complex With The Substrate, Hco3- Length = 259 Back     alignment and structure
>pdb|1CNH|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond Networks In A Protein-Zinc Binding Site Length = 259 Back     alignment and structure
>pdb|1CVF|A Chain A, Structural Consequences Of Redesigning A Protein-Zinc Binding Site Length = 259 Back     alignment and structure
>pdb|1CAK|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106 Hydrogen Bonding Network In Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1ZSA|A Chain A, Carbonic Anhydrase Ii Mutant E117q, Apo Form Length = 259 Back     alignment and structure
>pdb|3U45|X Chain X, Human Carbonic Anhydrase Ii V143a Length = 260 Back     alignment and structure
>pdb|12CA|A Chain A, Altering The Mouth Of A Hydrophobic Pocket. Structure And Kinetics Of Human Carbonic Anhydrase Ii Mutants At Residue Val-121 Length = 260 Back     alignment and structure
>pdb|1CAL|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106 Hydrogen Bonding Network In Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|9CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1CVA|A Chain A, Structural And Functional Importance Of A Conserved Hydrogen Bond Network In Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1CNJ|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond Networks In A Protein-Zinc Binding Site Length = 259 Back     alignment and structure
>pdb|1DCA|A Chain A, Structure Of An Engineered Metal Binding Site In Human Carbonic Anhydrase Ii Reveals The Architecture Of A Regulatory Cysteine Switch Length = 260 Back     alignment and structure
>pdb|1CCS|A Chain A, Structure-Assisted Redesign Of A Protein-Zinc Binding Site With Femtomolar Affinity Length = 259 Back     alignment and structure
>pdb|1CCT|A Chain A, Structure-Assisted Redesign Of A Protein-Zinc Binding Site With Femtomolar Affinity Length = 259 Back     alignment and structure
>pdb|1HED|A Chain A, Structural Consequences Of Hydrophilic Amino-Acid Substitutions In The Hydrophobic Pocket Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1CAI|A Chain A, Structural Analysis Of The Zinc Hydroxide-Thr 199-Glu 106 Hydrogen Bonding Network In Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1CNG|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond Networks In A Protein-Zinc Binding Site Length = 259 Back     alignment and structure
>pdb|1CNI|A Chain A, X-Ray Crystallographic Studies Of Engineered Hydrogen Bond Networks In A Protein-Zinc Binding Site Length = 259 Back     alignment and structure
>pdb|1CVH|A Chain A, Structural Consequences Of Redesigning A Protein-Zinc Binding Site Length = 255 Back     alignment and structure
>pdb|1CCU|A Chain A, Structure-Assisted Redesign Of A Protein-Zinc Binding Site With Femtomolar Affinity Length = 259 Back     alignment and structure
>pdb|1H9N|A Chain A, H119n Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1HEA|A Chain A, Carbonic Anhydrase Ii (Carbonate Dehydratase) (Hca Ii) (E.C.4.2.1.1) Mutant With Leu 198 Replaced By Arg (L198r) Length = 260 Back     alignment and structure
>pdb|1YDA|A Chain A, Structural Basis Of Inhibitor Affinity To Variants Of Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1H9Q|A Chain A, H119q Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1YDD|A Chain A, Structural Basis Of Inhibitor Affinity To Variants Of Human Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1HEB|A Chain A, Structural Consequences Of Hydrophilic Amino-Acid Substitutions In The Hydrophobic Pocket Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|7CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|8CA2|A Chain A, Engineering The Hydrophobic Pocket Of Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1HEC|A Chain A, Structural Consequences Of Hydrophilic Amino-Acid Substitutions In The Hydrophobic Pocket Of Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|1MUA|A Chain A, Structure And Energetics Of A Non-Proline Cis-Peptidyl Linkage In An Engineered Protein Length = 256 Back     alignment and structure
>pdb|1CVE|A Chain A, Structural Consequences Of Redesigning A Protein-Zinc Binding Site Length = 259 Back     alignment and structure
>pdb|1G0E|A Chain A, Site-Specific Mutant (His64 Replaced With Ala) Of Human Carbonic Anhydrase Ii Complexed With 4-Methylimidazole Length = 260 Back     alignment and structure
>pdb|2FNN|A Chain A, Activation Of Human Carbonic Anhydrase Ii By Exogenous Proton Donors Length = 260 Back     alignment and structure
>pdb|3M1Q|A Chain A, Carbonic Anhydrase Ii Mutant W5c-H64c With Opened Disulfide Bond Length = 265 Back     alignment and structure
>pdb|1CVD|A Chain A, Structural Consequences Of Redesigning A Protein-Zinc Binding Site Length = 255 Back     alignment and structure
>pdb|2FNK|A Chain A, Activation Of Human Carbonic Anhydrase Ii By Exogenous Proton Donors Length = 260 Back     alignment and structure
>pdb|3KIG|A Chain A, Mutant Carbonic Anhydrase Ii In Complex With An Azide And An Alkyne Length = 265 Back     alignment and structure
>pdb|2FNM|A Chain A, Activation Of Human Carbonic Anhdyrase Ii By Exogenous Proton Donors Length = 260 Back     alignment and structure
>pdb|1ZNC|A Chain A, Human Carbonic Anhydrase Iv Length = 266 Back     alignment and structure
>pdb|1YO0|A Chain A, Proton Transfer From His200 In Human Carbonic Anhydrase Ii Length = 260 Back     alignment and structure
>pdb|3IAI|A Chain A, Crystal Structure Of The Catalytic Domain Of The Tumor-Associated Human Carbonic Anhydrase Ix Length = 257 Back     alignment and structure
>pdb|1V9I|C Chain C, Crystal Structure Analysis Of The Site Specific Mutant (Q253c) Of Bovine Carbonic Anhydrase Ii Length = 261 Back     alignment and structure
>pdb|1V9E|A Chain A, Crystal Structure Analysis Of Bovine Carbonic Anhydrase Ii Length = 259 Back     alignment and structure
>pdb|1KEQ|A Chain A, Crystal Structure Of F65aY131C CARBONIC ANHYDRASE V, Covalently Modified With 4-Chloromethylimidazole Length = 248 Back     alignment and structure
>pdb|1DMX|A Chain A, Murine Mitochondrial Carbonic Anyhdrase V At 2.45 Angstroms Resolution Length = 248 Back     alignment and structure
>pdb|1URT|A Chain A, Murine Carbonic Anhydrase V Length = 248 Back     alignment and structure
>pdb|1Y7W|A Chain A, Crystal Structure Of A Halotolerant Carbonic Anhydrase From Dunaliella Salina Length = 291 Back     alignment and structure
>pdb|3JXH|C Chain C, Ca-Like Domain Of Human Ptprg Length = 265 Back     alignment and structure
>pdb|2ZNC|A Chain A, Murine Carbonic Anhydrase Iv Length = 258 Back     alignment and structure
>pdb|3B1B|A Chain A, The Unique Structure Of Wild Type Carbonic Anhydrase Alpha-Ca1 From Chlamydomonas Reinhardtii Length = 377 Back     alignment and structure
>pdb|2W2J|A Chain A, Crystal Structure Of The Human Carbonic Anhydrase Related Protein Viii Length = 291 Back     alignment and structure
>pdb|3JXF|A Chain A, Ca-Like Domain Of Human Ptprz Length = 272 Back     alignment and structure
>pdb|3S97|A Chain A, Ptprz Cntn1 Complex Length = 273 Back     alignment and structure
>pdb|1RJ5|A Chain A, Crystal Structure Of The Extracellular Domain Of Murine Carbonic Anhydrase Xiv Length = 261 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query275
1kop_A223 Carbonic anhydrase; lyase, structural trimming; 1. 2e-98
3q31_A244 Carbonic anhydrase; glysosy secreted, dimeric, lya 1e-89
3fe4_A278 Carbonic anhydrase 6; secretion, metal binding, st 5e-83
3k34_A260 Carbonic anhydrase 2; atomic resolution, sulfonami 3e-81
3ml5_A269 Carbonic anhydrase 7; protein-inhibitor complex, l 4e-81
2foy_A260 Carbonic anhydrase 1; lyase, zinc, inhibitor, copp 2e-80
3iai_A257 Carbonic anhydrase 9; transmembrane proteins, cell 3e-80
3d0n_A264 Carbonic anhydrase 13; lyase, metal-binding, metal 4e-80
3fw3_A266 Carbonic anhydrase 4; structure-based drug design. 2e-79
2hfx_A260 Carbonic anhydrase 3; proton shuttle, HCA III, pro 4e-79
3b1b_A377 Carbonic anhydrase 1; N-glycosylation, zinc-finger 1e-78
1keq_A248 F65A/Y131C-MI carbonic anhydrase V; proton transfe 1e-77
1jd0_A263 Carbonic anhydrase XII; extracellular domain, bito 1e-77
1y7w_A291 Halotolerant alpha-type carbonic anhydrase (DCA I; 1e-76
2znc_A258 Carbonic anhydrase IV; lyase, zinc, murine, membra 3e-76
2w2j_A291 Carbonic anhydrase-related protein; lyase, metal-b 5e-75
3jxf_A272 Receptor-type tyrosine-protein phosphatase zeta; C 1e-73
3jxg_A269 Receptor-type tyrosine-protein phosphatase gamma; 1e-72
1rj5_A261 Carbonic anhydrase XIV; beta-sheet, alpha-helix, z 2e-72
4e9o_X269 D8L antigen, IMV membrane protein; CAH alpha fold, 2e-64
>1kop_A Carbonic anhydrase; lyase, structural trimming; 1.90A {Neisseria gonorrhoeae} SCOP: b.74.1.1 PDB: 1koq_A Length = 223 Back     alignment and structure
 Score =  286 bits (735), Expect = 2e-98
 Identities = 79/230 (34%), Positives = 121/230 (52%), Gaps = 11/230 (4%)

Query: 34  EFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNAT 93
            + Y   G + P  WG L  E+  C  G+ QSP+++      V   L  +K +YKPS   
Sbjct: 3   HWGYT--GHDSPESWGNLSEEFRLCSTGKNQSPVNITE---TVSGKLPAIKVNYKPSMVD 57

Query: 94  LKNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGK 153
           ++N GH + + +  G  TL +NG  Y L+Q H+H PSE+ I G+ F +EAH VH+ ++ +
Sbjct: 58  VENNGHTIQVNYPEGGNTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQ 117

Query: 154 IAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLT 213
             V+ ++Y+ G+ +  L SI + +   AG      +    D   +     KYYR+ GSLT
Sbjct: 118 PLVLAVLYEAGKTNGRLSSIWNVMPMTAGK---VKLNQPFDASTLLPKRLKYYRFAGSLT 174

Query: 214 IPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIV 263
            PPCTE V W +++    + + Q      AV  E   N RP QP+N R+V
Sbjct: 175 TPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVGSE---NNRPVQPLNARVV 221


>3q31_A Carbonic anhydrase; glysosy secreted, dimeric, lyase; HET: NAG; 2.70A {Aspergillus oryzae} Length = 244 Back     alignment and structure
>3fe4_A Carbonic anhydrase 6; secretion, metal binding, structural GEN structural genomics consortium, SGC, glycoprotein, lyase, M binding, secreted; 1.90A {Homo sapiens} Length = 278 Back     alignment and structure
>3k34_A Carbonic anhydrase 2; atomic resolution, sulfonamide inhibitor mutation, lyase, metal-binding, lyase-lyase inhibitor compl; HET: HGB SUA; 0.90A {Homo sapiens} PDB: 1ca3_A* 1cnw_A* 1cny_A* 1eou_A* 1g6v_A 1hca_A 1kwq_A* 1kwr_A* 1t9n_A 1tb0_X 1tbt_X 1te3_X 1teq_X 1teu_X 1cnx_A 1xev_A 1xeg_A 2ax2_A* 2eu3_A* 2ez7_A* ... Length = 260 Back     alignment and structure
>3ml5_A Carbonic anhydrase 7; protein-inhibitor complex, lyase; HET: AZM; 2.05A {Homo sapiens} PDB: 3mdz_A* Length = 269 Back     alignment and structure
>2foy_A Carbonic anhydrase 1; lyase, zinc, inhibitor, copper; HET: B30; 1.55A {Homo sapiens} SCOP: b.74.1.1 PDB: 1bzm_A* 1czm_A* 1azm_A 1hug_A 1huh_A 1hcb_A* 2fw4_A* 2nmx_A* 2nn1_A* 2nn7_A* 3lxe_A* 1jv0_A 1j9w_A 1crm_A 2cab_A 2it4_A Length = 260 Back     alignment and structure
>3iai_A Carbonic anhydrase 9; transmembrane proteins, cell membrane, projection, disulfide bond, glycoprotein, lyase, membrane, binding, nucleus; HET: AZM NAG BMA MAN; 2.20A {Homo sapiens} Length = 257 Back     alignment and structure
>3d0n_A Carbonic anhydrase 13; lyase, metal-binding, metal binding PROT; HET: GOL; 1.55A {Homo sapiens} PDB: 3czv_A* 3da2_A* Length = 264 Back     alignment and structure
>3fw3_A Carbonic anhydrase 4; structure-based drug design. small molecule complex. CO-CRYS membrane, disease mutation, glycoprotein, GPI-anchor; HET: ETS GLC; 1.72A {Homo sapiens} PDB: 1znc_A* 3f7b_A* 3f7u_A* Length = 266 Back     alignment and structure
>3b1b_A Carbonic anhydrase 1; N-glycosylation, zinc-finger, lyase; HET: NAG; 1.88A {Chlamydomonas reinhardtii} Length = 377 Back     alignment and structure
>1keq_A F65A/Y131C-MI carbonic anhydrase V; proton transfer, engineered residue, lyase; HET: 4MZ; 1.88A {Mus musculus} SCOP: b.74.1.1 PDB: 1dmx_A 1dmy_A* 1urt_A Length = 248 Back     alignment and structure
>1jd0_A Carbonic anhydrase XII; extracellular domain, bitopic protein, type I membrane protein, lyase; HET: AZM; 1.50A {Homo sapiens} SCOP: b.74.1.1 PDB: 1jcz_A* Length = 263 Back     alignment and structure
>1y7w_A Halotolerant alpha-type carbonic anhydrase (DCA I; haltolerant protein, algal Ca anhydrase, salt tolerant protein, zinc enzyme; 1.86A {Dunaliella salina} Length = 291 Back     alignment and structure
>2znc_A Carbonic anhydrase IV; lyase, zinc, murine, membrane; 2.80A {Mus musculus} SCOP: b.74.1.1 PDB: 3znc_A* Length = 258 Back     alignment and structure
>2w2j_A Carbonic anhydrase-related protein; lyase, metal-binding; 1.60A {Homo sapiens} Length = 291 Back     alignment and structure
>3jxf_A Receptor-type tyrosine-protein phosphatase zeta; Ca-like domain, alternative splicing, glycoprotein, hydrolase, membrane, polymorphism; 2.00A {Homo sapiens} PDB: 3s97_A* Length = 272 Back     alignment and structure
>1rj5_A Carbonic anhydrase XIV; beta-sheet, alpha-helix, zinc enzyme, lyase; HET: NAG BMA; 2.81A {Mus musculus} SCOP: b.74.1.1 PDB: 1rj6_A* Length = 261 Back     alignment and structure
>4e9o_X D8L antigen, IMV membrane protein; CAH alpha fold, VP7 motif, beta sheet, cell surface chondroi binding, viral entry, chondroitin sulfate; 1.42A {Vaccinia virus} PDB: 4etq_X Length = 269 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query275
1kop_A223 Carbonic anhydrase; lyase, structural trimming; 1. 100.0
3k34_A260 Carbonic anhydrase 2; atomic resolution, sulfonami 100.0
3q31_A244 Carbonic anhydrase; glysosy secreted, dimeric, lya 100.0
2foy_A260 Carbonic anhydrase 1; lyase, zinc, inhibitor, copp 100.0
3ml5_A269 Carbonic anhydrase 7; protein-inhibitor complex, l 100.0
3d0n_A264 Carbonic anhydrase 13; lyase, metal-binding, metal 100.0
2hfx_A260 Carbonic anhydrase 3; proton shuttle, HCA III, pro 100.0
1rj5_A261 Carbonic anhydrase XIV; beta-sheet, alpha-helix, z 100.0
1jd0_A263 Carbonic anhydrase XII; extracellular domain, bito 100.0
3iai_A257 Carbonic anhydrase 9; transmembrane proteins, cell 100.0
3fw3_A266 Carbonic anhydrase 4; structure-based drug design. 100.0
2w2j_A291 Carbonic anhydrase-related protein; lyase, metal-b 100.0
3jxf_A272 Receptor-type tyrosine-protein phosphatase zeta; C 100.0
3jxg_A269 Receptor-type tyrosine-protein phosphatase gamma; 100.0
3b1b_A377 Carbonic anhydrase 1; N-glycosylation, zinc-finger 100.0
2znc_A258 Carbonic anhydrase IV; lyase, zinc, murine, membra 100.0
3fe4_A278 Carbonic anhydrase 6; secretion, metal binding, st 100.0
1keq_A248 F65A/Y131C-MI carbonic anhydrase V; proton transfe 100.0
1y7w_A291 Halotolerant alpha-type carbonic anhydrase (DCA I; 100.0
4e9o_X269 D8L antigen, IMV membrane protein; CAH alpha fold, 100.0
>1kop_A Carbonic anhydrase; lyase, structural trimming; 1.90A {Neisseria gonorrhoeae} SCOP: b.74.1.1 PDB: 1koq_A Back     alignment and structure
Probab=100.00  E-value=4.8e-77  Score=523.62  Aligned_cols=221  Identities=35%  Similarity=0.698  Sum_probs=202.6

Q ss_pred             CCcccCCCCCCCCCCccccCcCcccCCCCCCCCCceecCCceeeeccCCCccccccCCccEEeecCeeeEEEeeCCCceE
Q 046862           33 IEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTL  112 (275)
Q Consensus        33 ~~w~Y~~~~~~gP~~W~~~~~~~~~C~~G~~QSPInI~~~~~~~~~~l~~l~~~y~~~~~~l~N~G~tv~v~~~~~~~~~  112 (275)
                      .+|+|.  +..||++|+.++++|..|++|++||||||.+..   .+.+++|.++|.+..++|.|+||+++|.++++.+.+
T Consensus         2 ~~w~Y~--~~~GP~~W~~l~p~~~~C~~G~~QSPInI~~~~---~~~l~~L~~~y~~~~~~l~N~Ghtv~v~~~~~~~~~   76 (223)
T 1kop_A            2 THWGYT--GHDSPESWGNLSEEFRLCSTGKNQSPVNITETV---SGKLPAIKVNYKPSMVDVENNGHTIQVNYPEGGNTL   76 (223)
T ss_dssp             CCCCSS--GGGSGGGHHHHCGGGTHHHHCSSCSCCEECCCB---CCCCCCEEEECCCBCCEEEECSSCEEEECSSCCCEE
T ss_pred             CCcccC--CCCChhhhhhcCcchhhhcCCCccCCEEEccCC---CCCCCCeeeecCCCceEEEECCceeEEeecCCCCeE
Confidence            469996  567999999999999999889999999999854   567788999998888899999999999998655689


Q ss_pred             EEcCeEEEEeeeEecCCCCCccccccccceeeeeeecCCCceEEEEEEEecCCCCchHHHHHHHHhhhcCCCCceeEecc
Q 046862          113 RINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGV  192 (275)
Q Consensus       113 ~i~G~~Y~l~q~HfH~gSEHtidG~~~~~E~HiVh~~~~~~laVl~v~~~~~~~n~~l~~i~~~l~~i~~~~~~~~~~~~  192 (275)
                      .++|.+|+|.||||||||||+|||++|||||||||++.++++|||||||++|++|++|++|++.|+.+..   +...+..
T Consensus        77 ~~~g~~Y~l~Q~HfH~gSEHtidG~~~p~ElHlVH~n~~~~laVlgv~~~~g~~n~~l~~i~~~l~~i~~---~~~~~~~  153 (223)
T 1kop_A           77 TVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLVLAVLYEAGKTNGRLSSIWNVMPMTAG---KVKLNQP  153 (223)
T ss_dssp             EETTEEEEEEEEEEESSCSSEETTBCCSEEEEEEEECTTCCEEEEEEEEEECSCCSTTHHHHTTCCSSSE---EEECSSC
T ss_pred             EECCeEEEEEEEEECCCcccccccccCcceeEEEeecCCCCeEEEEeeeecCCchhHHHHHHHHHHhccC---ceeecCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999888743   3444577


Q ss_pred             cCCCCCCCCCcceEEEeecccCCCCccceEEEEeceeeccCHHHHHHHHHhccCCCCCCCCCCCCCCCCeEE
Q 046862          193 IDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIVK  264 (275)
Q Consensus       193 ~~l~~L~~~~~~yy~Y~GSLTtPPCsE~V~WiV~~~pi~IS~~Ql~~fr~l~~~~~~~N~Rp~Qpln~R~V~  264 (275)
                      |++.+|+|...+||+|.||||||||+|+|+|+||++|+.||.+||++||+++..   +|+||+||||||.|+
T Consensus       154 ~~~~~Llp~~~~yy~Y~GSLTTPPC~E~V~W~V~~~pi~iS~~Ql~~fr~l~~~---~N~Rp~Qpln~R~V~  222 (223)
T 1kop_A          154 FDASTLLPKRLKYYRFAGSLTTPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVGS---ENNRPVQPLNARVVI  222 (223)
T ss_dssp             BCGGGGSCSCCCEEEEEEECSSTTCCEEEEEEEESSCEEECHHHHHHHHHHHSS---CCCCCCCCCTTCCCB
T ss_pred             cCHHHHCCCCCCeEEEeCcccCCCCCCCeeEEEeccccEeCHHHHHHHHHHccC---CCCCCCCcCCCCeEe
Confidence            999999998899999999999999999999999999999999999999998753   699999999999985



>3k34_A Carbonic anhydrase 2; atomic resolution, sulfonamide inhibitor mutation, lyase, metal-binding, lyase-lyase inhibitor compl; HET: HGB SUA; 0.90A {Homo sapiens} SCOP: b.74.1.1 PDB: 1ca3_A* 1cnw_A* 1cny_A* 1eou_A* 1g6v_A 1hca_A 1kwq_A* 1kwr_A* 1t9n_A 1tb0_X 1tbt_X 1te3_X 1teq_X 1teu_X 1cnx_A 1xev_A 1xeg_A 2ax2_A* 2eu3_A* 2ez7_A* ... Back     alignment and structure
>3q31_A Carbonic anhydrase; glysosy secreted, dimeric, lyase; HET: NAG; 2.70A {Aspergillus oryzae} Back     alignment and structure
>2foy_A Carbonic anhydrase 1; lyase, zinc, inhibitor, copper; HET: B30; 1.55A {Homo sapiens} SCOP: b.74.1.1 PDB: 1bzm_A* 1czm_A* 1azm_A 1hug_A 1huh_A 1hcb_A* 2fw4_A* 2nmx_A* 2nn1_A* 2nn7_A* 3lxe_A* 1jv0_A 1j9w_A 1crm_A 2cab_A 2it4_A Back     alignment and structure
>3ml5_A Carbonic anhydrase 7; protein-inhibitor complex, lyase; HET: AZM; 2.05A {Homo sapiens} SCOP: b.74.1.1 PDB: 3mdz_A* Back     alignment and structure
>3d0n_A Carbonic anhydrase 13; lyase, metal-binding, metal binding PROT; HET: GOL; 1.55A {Homo sapiens} PDB: 3czv_A* 3da2_A* Back     alignment and structure
>1rj5_A Carbonic anhydrase XIV; beta-sheet, alpha-helix, zinc enzyme, lyase; HET: NAG BMA; 2.81A {Mus musculus} SCOP: b.74.1.1 PDB: 1rj6_A* Back     alignment and structure
>1jd0_A Carbonic anhydrase XII; extracellular domain, bitopic protein, type I membrane protein, lyase; HET: AZM; 1.50A {Homo sapiens} SCOP: b.74.1.1 PDB: 1jcz_A* Back     alignment and structure
>3iai_A Carbonic anhydrase 9; transmembrane proteins, cell membrane, projection, disulfide bond, glycoprotein, lyase, membrane, binding, nucleus; HET: AZM NAG BMA MAN; 2.20A {Homo sapiens} SCOP: b.74.1.0 Back     alignment and structure
>3fw3_A Carbonic anhydrase 4; structure-based drug design. small molecule complex. CO-CRYS membrane, disease mutation, glycoprotein, GPI-anchor; HET: ETS GLC; 1.72A {Homo sapiens} SCOP: b.74.1.1 PDB: 1znc_A* 3f7b_A* 3f7u_A* Back     alignment and structure
>2w2j_A Carbonic anhydrase-related protein; lyase, metal-binding; 1.60A {Homo sapiens} Back     alignment and structure
>3jxf_A Receptor-type tyrosine-protein phosphatase zeta; Ca-like domain, alternative splicing, glycoprotein, hydrolase, membrane, polymorphism; 2.00A {Homo sapiens} SCOP: b.74.1.0 PDB: 3s97_A* Back     alignment and structure
>3b1b_A Carbonic anhydrase 1; N-glycosylation, zinc-finger, lyase; HET: NAG; 1.88A {Chlamydomonas reinhardtii} Back     alignment and structure
>2znc_A Carbonic anhydrase IV; lyase, zinc, murine, membrane; 2.80A {Mus musculus} SCOP: b.74.1.1 PDB: 3znc_A* Back     alignment and structure
>3fe4_A Carbonic anhydrase 6; secretion, metal binding, structural GEN structural genomics consortium, SGC, glycoprotein, lyase, M binding, secreted; 1.90A {Homo sapiens} SCOP: b.74.1.0 Back     alignment and structure
>1keq_A F65A/Y131C-MI carbonic anhydrase V; proton transfer, engineered residue, lyase; HET: 4MZ; 1.88A {Mus musculus} SCOP: b.74.1.1 PDB: 1dmx_A 1dmy_A* 1urt_A Back     alignment and structure
>1y7w_A Halotolerant alpha-type carbonic anhydrase (DCA I; haltolerant protein, algal Ca anhydrase, salt tolerant protein, zinc enzyme; 1.86A {Dunaliella salina} Back     alignment and structure
>4e9o_X D8L antigen, IMV membrane protein; CAH alpha fold, VP7 motif, beta sheet, cell surface chondroi binding, viral entry, chondroitin sulfate; 1.42A {Vaccinia virus} PDB: 4etq_X Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 275
d1kopa_223 b.74.1.1 (A:) Carbonic anhydrase {Neisseria gonorr 3e-67
d1flja_259 b.74.1.1 (A:) Carbonic anhydrase {Rat (Rattus norv 6e-61
d1luga_259 b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapi 2e-60
d1hcba_258 b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapi 2e-60
d1rj6a_259 b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus muscu 3e-58
d1znca_262 b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapi 4e-58
d1jd0a_260 b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapi 1e-57
d2znca_258 b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus muscu 6e-56
d1keqa_238 b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus muscu 2e-52
>d1kopa_ b.74.1.1 (A:) Carbonic anhydrase {Neisseria gonorrhoeae [TaxId: 485]} Length = 223 Back     information, alignment and structure

class: All beta proteins
fold: Carbonic anhydrase
superfamily: Carbonic anhydrase
family: Carbonic anhydrase
domain: Carbonic anhydrase
species: Neisseria gonorrhoeae [TaxId: 485]
 Score =  206 bits (524), Expect = 3e-67
 Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 11/229 (4%)

Query: 35  FNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATL 94
           + Y   G + P  WG L  E+  C  G+ QSP+++      V   L  +K +YKPS   +
Sbjct: 4   WGYT--GHDSPESWGNLSEEFRLCSTGKNQSPVNITE---TVSGKLPAIKVNYKPSMVDV 58

Query: 95  KNRGHDMMLQWEGGAGTLRINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKI 154
           +N GH + + +  G  TL +NG  Y L+Q H+H PSE+ I G+ F +EAH VH+ ++ + 
Sbjct: 59  ENNGHTIQVNYPEGGNTLTVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQP 118

Query: 155 AVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGVIDPRGIKIGSRKYYRYIGSLTI 214
            V+ ++Y+ G+ +  L SI + +   AG   +  +    D   +     KYYR+ GSLT 
Sbjct: 119 LVLAVLYEAGKTNGRLSSIWNVMPMTAG---KVKLNQPFDASTLLPKRLKYYRFAGSLTT 175

Query: 215 PPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIV 263
           PPCTE V W +++    + + Q      AV  E   N RP QP+N R+V
Sbjct: 176 PPCTEGVSWLVLKTYDHIDQAQAEKFTRAVGSE---NNRPVQPLNARVV 221


>d1flja_ b.74.1.1 (A:) Carbonic anhydrase {Rat (Rattus norvegicus), isozyme III [TaxId: 10116]} Length = 259 Back     information, alignment and structure
>d1luga_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]} Length = 259 Back     information, alignment and structure
>d1hcba_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), erythrocytes, isozyme I [TaxId: 9606]} Length = 258 Back     information, alignment and structure
>d1rj6a_ b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus musculus), isozyme XIV [TaxId: 10090]} Length = 259 Back     information, alignment and structure
>d1znca_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), isozyme IV [TaxId: 9606]} Length = 262 Back     information, alignment and structure
>d1jd0a_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), isozyme XII [TaxId: 9606]} Length = 260 Back     information, alignment and structure
>d2znca_ b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus musculus), isozyme IV [TaxId: 10090]} Length = 258 Back     information, alignment and structure
>d1keqa_ b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus musculus), liver, isozyme V [TaxId: 10090]} Length = 238 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query275
d1kopa_223 Carbonic anhydrase {Neisseria gonorrhoeae [TaxId: 100.0
d1flja_259 Carbonic anhydrase {Rat (Rattus norvegicus), isozy 100.0
d1hcba_258 Carbonic anhydrase {Human (Homo sapiens), erythroc 100.0
d1luga_259 Carbonic anhydrase {Human (Homo sapiens), erythroc 100.0
d1jd0a_260 Carbonic anhydrase {Human (Homo sapiens), isozyme 100.0
d1rj6a_259 Carbonic anhydrase {Mouse (Mus musculus), isozyme 100.0
d1znca_262 Carbonic anhydrase {Human (Homo sapiens), isozyme 100.0
d2znca_258 Carbonic anhydrase {Mouse (Mus musculus), isozyme 100.0
d1keqa_238 Carbonic anhydrase {Mouse (Mus musculus), liver, i 100.0
>d1kopa_ b.74.1.1 (A:) Carbonic anhydrase {Neisseria gonorrhoeae [TaxId: 485]} Back     information, alignment and structure
class: All beta proteins
fold: Carbonic anhydrase
superfamily: Carbonic anhydrase
family: Carbonic anhydrase
domain: Carbonic anhydrase
species: Neisseria gonorrhoeae [TaxId: 485]
Probab=100.00  E-value=8.9e-71  Score=482.14  Aligned_cols=221  Identities=34%  Similarity=0.687  Sum_probs=198.3

Q ss_pred             CCcccCCCCCCCCCCccccCcCcccCCCCCCCCCceecCCceeeeccCCCccccccCCccEEeecCeeeEEEeeCCCceE
Q 046862           33 IEFNYEEGGENGPSKWGQLHSEWSACKNGRMQSPIDLLNERVQVVSHLGRLKRSYKPSNATLKNRGHDMMLQWEGGAGTL  112 (275)
Q Consensus        33 ~~w~Y~~~~~~gP~~W~~~~~~~~~C~~G~~QSPInI~~~~~~~~~~l~~l~~~y~~~~~~l~N~G~tv~v~~~~~~~~~  112 (275)
                      .+|+|+  +++||++|+.++++|..|++|++||||||.+..+   ..+.+|.++|.+..+++.|+||++++.+.++.+.+
T Consensus         2 ~~w~Y~--~~~GP~~W~~l~~~~~~C~~G~~QSPInI~~~~~---~~~~~l~~~~~~~~~~l~N~G~ti~~~~~~~~~~~   76 (223)
T d1kopa_           2 THWGYT--GHDSPESWGNLSEEFRLCSTGKNQSPVNITETVS---GKLPAIKVNYKPSMVDVENNGHTIQVNYPEGGNTL   76 (223)
T ss_dssp             CCCCSS--GGGSGGGHHHHCGGGTHHHHCSSCSCCEECCCBC---CCCCCEEEECCCBCCEEEECSSCEEEECSSCCCEE
T ss_pred             CccccC--CCCChhhhcccCccchhccCCCcCCCEeECcccc---ccCCceEEeccCceEEEEECCcEEEEEecCCcceE
Confidence            479996  6789999999999999999999999999987653   34556788888888999999999999987766789


Q ss_pred             EEcCeEEEEeeeEecCCCCCccccccccceeeeeeecCCCceEEEEEEEecCCCCchHHHHHHHHhhhcCCCCceeEecc
Q 046862          113 RINGTEYVLQQCHWHSPSEHTINGQRFALEAHMVHVSQDGKIAVVGIMYKIGRPDSFLESISDHLTQVAGSNERETVAGV  192 (275)
Q Consensus       113 ~i~G~~Y~l~q~HfH~gSEHtidG~~~~~E~HiVh~~~~~~laVl~v~~~~~~~n~~l~~i~~~l~~i~~~~~~~~~~~~  192 (275)
                      .++|..|.|.||||||||||+|||++|||||||||++.+++++|||||++.++.|+.++.+++.|+...   ++......
T Consensus        77 ~~~g~~Y~l~q~hfH~pSEH~i~g~~~~~E~hlvh~~~~~~~~vv~v~~~~~~~n~~~~~~~~~l~~~~---~~~~~~~~  153 (223)
T d1kopa_          77 TVNGRTYTLKQFHFHVPSENQIKGRTFPMEAHFVHLDENKQPLVLAVLYEAGKTNGRLSSIWNVMPMTA---GKVKLNQP  153 (223)
T ss_dssp             EETTEEEEEEEEEEESSCSSEETTBCCSEEEEEEEECTTCCEEEEEEEEEECSCCSTTHHHHTTCCSSS---EEEECSSC
T ss_pred             eecCceeEEEEEEECCCCcceECCEEcCcceEEEEeccCCccEEEEEEEeccCccHHHHHHHHhhhhcc---ccccccCC
Confidence            999999999999999999999999999999999999999999999999999999999999988776543   23333467


Q ss_pred             cCCCCCCCCCcceEEEeecccCCCCccceEEEEeceeeccCHHHHHHHHHhccCCCCCCCCCCCCCCCCeEE
Q 046862          193 IDPRGIKIGSRKYYRYIGSLTIPPCTENVLWTIVRKVRTVTREQVRSLRVAVHDESDTNARPQQPINLRIVK  264 (275)
Q Consensus       193 ~~l~~L~~~~~~yy~Y~GSLTtPPCsE~V~WiV~~~pi~IS~~Ql~~fr~l~~~~~~~N~Rp~Qpln~R~V~  264 (275)
                      |++..|+|...+||+|.||||||||+|+|+|+||++|+.||++||++||+++.   .+|+||+||||||.|+
T Consensus       154 ~~l~~llp~~~~yy~Y~GSLTtPPC~E~V~WiV~~~~~~Is~~Ql~~~~~~~~---~~N~Rp~Q~ln~R~V~  222 (223)
T d1kopa_         154 FDASTLLPKRLKYYRFAGSLTTPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVG---SENNRPVQPLNARVVI  222 (223)
T ss_dssp             BCGGGGSCSCCCEEEEEEECSSTTCCEEEEEEEESSCEEECHHHHHHHHHHHS---SCCCCCCCCCTTCCCB
T ss_pred             cCHHHhCCCCCCeEEEeceecCCCCcccEEEEEeCeEeecCHHHHHHHHHhcc---CCCCCCCCCCCCCEec
Confidence            88999999989999999999999999999999999999999999999999874   3699999999999985



>d1flja_ b.74.1.1 (A:) Carbonic anhydrase {Rat (Rattus norvegicus), isozyme III [TaxId: 10116]} Back     information, alignment and structure
>d1hcba_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), erythrocytes, isozyme I [TaxId: 9606]} Back     information, alignment and structure
>d1luga_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), erythrocytes, isozyme II [TaxId: 9606]} Back     information, alignment and structure
>d1jd0a_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), isozyme XII [TaxId: 9606]} Back     information, alignment and structure
>d1rj6a_ b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus musculus), isozyme XIV [TaxId: 10090]} Back     information, alignment and structure
>d1znca_ b.74.1.1 (A:) Carbonic anhydrase {Human (Homo sapiens), isozyme IV [TaxId: 9606]} Back     information, alignment and structure
>d2znca_ b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus musculus), isozyme IV [TaxId: 10090]} Back     information, alignment and structure
>d1keqa_ b.74.1.1 (A:) Carbonic anhydrase {Mouse (Mus musculus), liver, isozyme V [TaxId: 10090]} Back     information, alignment and structure