Citrus Sinensis ID: 046878

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100----
Protein Sequence
MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV
Secondary Structure (PSIPRED)
ccccccccEEEEEccccccHHHHHHHHHHccccEEEEEcccccccccccccEEEEEcccccHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHccccccHHHHHHHHHHccEEEEEccHHHHHHHHHHHHHHHHHcccHHcc
Coil and Loop (DISEMBL)
megentkpkilifggtgyLGKYMVKAsvssghntfvyarpvtensrtsKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVagnikvfv
Flexible Loop (DISEMBL)
megentkpkiliFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV
Low Complexity Region (SEG)
MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV
Disordered region (IsUnstruct)
********KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT*******LEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF*
Disordered Region (DISOPRED)
******K****IFGGTGYLGKYMVKASVSSGHNTFVYARPVTE**RTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV
Disordered Region (DISEMBL)
MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV
Disordered Region (DISPRO)
******KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIK***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	104	2.2.26 [Sep-21-2011]
Q15GI3	323	Isoeugenol synthase 1 OS=	N/A	no	0.942	0.303	0.570	2e-27
Q15GI4	314	Eugenol synthase 1 OS=Oci	N/A	no	0.951	0.315	0.530	1e-25
P52577	310	Isoflavone reductase homo	yes	no	0.942	0.316	0.433	7e-17
P52578	308	Isoflavone reductase homo	N/A	no	0.932	0.314	0.447	1e-16
P52579	310	Isoflavone reductase homo	N/A	no	0.942	0.316	0.471	2e-15
E1U332	308	Isoflavone reductase-like	N/A	no	0.923	0.311	0.481	2e-15
P52580	309	Isoflavone reductase homo	N/A	no	0.923	0.310	0.415	1e-12
P52581	312	Isoflavone reductase homo	N/A	no	0.932	0.310	0.401	3e-12
P52576	318	Isoflavone reductase OS=P	N/A	no	0.942	0.308	0.324	5e-11
Q84V83	382	Leucoanthocyanidin reduct	N/A	no	0.932	0.253	0.390	4e-10

>sp|Q15GI3|IGS1_PETHY Isoeugenol synthase 1 OS=Petunia hybrida GN=IGS1 PE=1 SV=1

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 61/107 (57%), Positives = 79/107 (73%), Gaps = 9/107 (8%)

Query: 7   KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--------- 57
           K KILI G TGYLGKYMVKAS+S GH T+ Y  P+ +NS  SKL++ KEF+         
Sbjct: 5   KGKILILGATGYLGKYMVKASISLGHPTYAYVMPLKKNSDDSKLQLLKEFESLGVTIFYG 64

Query: 58  ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
           EL EH+K++++ KEV +VIST+A PQ L+QLK+++AIK AGNIK FV
Sbjct: 65  ELSEHDKLVAVFKEVDIVISTLAVPQYLEQLKVIEAIKEAGNIKRFV 111

Catalyzes the synthesis of the phenylpropene isoeugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Isoeugenol is a characteristic aromatic constituent of spices.
Petunia hybrida (taxid: 4102)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1EC: 9

>sp|Q15GI4|EGS1_OCIBA Eugenol synthase 1 OS=Ocimum basilicum GN=EGS1 PE=1 SV=1

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 14/113 (12%)

Query: 1   MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--- 57
           ME    K KILIFGGTGY+G +MVK S+  GH T+V+ RP      +SK  +  EFQ   
Sbjct: 1   MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP-----NSSKTTLLDEFQSLG 55

Query: 58  ------ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
                 ELDEHEK++ ++K+V VVIS +A+PQ+LDQ KI++AIKVAGNIK F+
Sbjct: 56  AIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFL 108

Catalyzes the synthesis of the phenylpropene eugenol from coniferyl acetate. Phenylpropenes are produced by plants as defense compounds with antimicrobial and antianimal properties, or as floral attractants of pollinators. Eugenol is a characteristic aromatic constituent of spices.

Ocimum basilicum (taxid: 39350)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

EC: 8

>sp|P52577|IFRH_ARATH Isoflavone reductase homolog P3 OS=Arabidopsis thaliana GN=At1g75280 PE=1 SV=1

 Score = 85.9 bits (211), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 46/106 (43%), Positives = 69/106 (65%), Gaps = 8/106 (7%)

Query: 7   KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT--ENSRTSKLEIHKEFQ------E 58
           K KIL+ GGTGY+GK++V+AS  +GH+TF   R  T  +  +   ++  K+        +
Sbjct: 5   KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGD 64

Query: 59  LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
           L++HE ++  +K+V VVISTV   Q+LDQ KI+ AIK AGN+K F+
Sbjct: 65  LNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFL 110

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52578|IFRH_SOLTU Isoflavone reductase homolog OS=Solanum tuberosum PE=2 SV=1

 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 8/105 (7%)

Query: 7   KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT--ENSRTSKLEIHKEFQ------E 58
           K KIL  GGTGY+GK++V+AS  +GH+TFV  R  T    ++T  ++  K F       +
Sbjct: 4   KSKILFIGGTGYIGKFIVEASAKAGHDTFVLVRESTLSNPTKTKLIDTFKSFGVTFVHGD 63

Query: 59  LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
           L +HE ++  +K+V VVISTV +  L DQ+K++ AIK AGN+K F
Sbjct: 64  LYDHESLVKAIKQVDVVISTVGHALLADQVKLIAAIKEAGNVKRF 108

Solanum tuberosum (taxid: 4113)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52579|IFRH_TOBAC Isoflavone reductase homolog A622 OS=Nicotiana tabacum PE=2 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/106 (47%), Positives = 64/106 (60%), Gaps = 8/106 (7%)

Query: 7   KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT-ENSRTSKL-EIHKE------FQE 58
           K KILI GGTGY+GKY+V+ S  SGH TF   R  T +N   SKL +  K       F +
Sbjct: 6   KSKILIIGGTGYIGKYLVETSAKSGHPTFALIRESTLKNPEKSKLIDTFKSYGVTLLFGD 65

Query: 59  LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
           +   E ++  +K+V VVISTV   Q  DQ+ I+ AIK AGNIK F+
Sbjct: 66  ISNQESLLKAIKQVDVVISTVGGQQFTDQVNIIKAIKEAGNIKRFL 111

Nicotiana tabacum (taxid: 4097)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|E1U332|ALL12_OLEEU Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 67/106 (63%), Gaps = 10/106 (9%)

Query: 7   KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--------- 57
           K KILI GGTGY+GK++V+AS  S H TF  AR  T  S   K +I + F+         
Sbjct: 4   KTKILIIGGTGYIGKFIVEASAKSEHPTFALAREST-ISDPVKGKIIQGFKNSGVTILTG 62

Query: 58  ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
           +L +HE ++  +K+V VVISTV   QL DQ+KI+ AIK AGN+K F
Sbjct: 63  DLYDHESLVKAIKQVDVVISTVGQLQLADQVKIIAAIKEAGNVKRF 108

Olea europaea (taxid: 4146)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52580|IFRH_MAIZE Isoflavone reductase homolog IRL OS=Zea mays GN=IRL PE=2 SV=1

 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 60/106 (56%), Gaps = 10/106 (9%)

Query: 7   KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE-------- 58
           K KIL+ GGTGYLG+++V AS   GH T    R  T  S  +K  + K FQ+        
Sbjct: 5   KSKILVVGGTGYLGRHVVAASARLGHPTSALVRD-TAPSDPAKAALLKSFQDAGVTLLKG 63

Query: 59  -LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
            L +   ++S +K   VVIS +   Q+ DQ ++VDAIK AGN+K F
Sbjct: 64  DLYDQASLVSAVKGADVVISVLGSMQIADQSRLVDAIKEAGNVKRF 109

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52581|IFRH_LUPAL Isoflavone reductase homolog OS=Lupinus albus PE=2 SV=1

 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 65/112 (58%), Gaps = 15/112 (13%)

Query: 7   KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE-------- 58
           K K+L+ GGTGY+G+ +VKAS+  GH TF+  RP        KL+I   F++        
Sbjct: 3   KSKVLVVGGTGYVGRRIVKASLEHGHETFILQRPEI-GLDIEKLQILLSFKKQGAILVEA 61

Query: 59  -LDEHEKIISILKEVGVVISTVA-----YPQLLDQLKIVDAIKVAGNIKVFV 104
              +H+ ++  +K V VVI T++        LL QLK+V+AIK AGNIK F+
Sbjct: 62  SFSDHKSLVDAVKLVDVVICTMSGVHFRSHNLLTQLKLVEAIKDAGNIKRFL 113

Lupinus albus (taxid: 3870)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: -

>sp|P52576|IFR_PEA Isoflavone reductase OS=Pisum sativum GN=IFR PE=2 SV=1

 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 19/117 (16%)

Query: 6   TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----------EIHKE 55
           T+ KILI G TG +G+++V AS+ +G+ T+   R  ++N    KL          E+ K 
Sbjct: 3   TENKILILGATGAIGRHIVWASIKAGNPTYALVRKTSDNVNKPKLTEAANPETKEELLKN 62

Query: 56  FQ---------ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
           +Q         ++++HE +++ +K+V  VI       + DQ+K++ AIK AGN+K F
Sbjct: 63  YQASGVILLEGDINDHETLVNAIKQVDTVICAAGRLLIEDQVKVIKAIKEAGNVKRF 119

Reduces achiral isoflavones to chiral isoflavanones during the biosynthesis of chiral pterocarpan phytoalexins. The reduction product (sophrol) is a third isomer, which represents the penultimate intermediate in the synthesis of the phytoalexin (+)-pisatin, the major phytoalexin in pea.

Pisum sativum (taxid: 3888)

EC: 1

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 5

>sp|Q84V83|LAR_DESUN Leucoanthocyanidin reductase OS=Desmodium uncinatum GN=LAR PE=1 SV=1

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 13/110 (11%)

Query: 6   TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE------- 58
           TK + L+ GGTG++G+++ KAS+  G+ TF+  RP   +   SK  I K FQ+       
Sbjct: 11  TKNRTLVVGGTGFIGQFITKASLGFGYPTFLLVRPGPVSP--SKAVIIKTFQDKGAKVIY 68

Query: 59  --LDEHEKIISILK--EVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
             +++ E +  ILK  E+ VVIS V   +LLDQL +++AIK    IK F+
Sbjct: 69  GVINDKECMEKILKEYEIDVVISLVGGARLLDQLTLLEAIKSVKTIKRFL 118

Catalyzes the synthesis of catechin from 3,4-cis-leucocyanidin. Also synthesizes afzelechin and gallocatechin.

Desmodium uncinatum (taxid: 225101)

EC: 1

EC: .

EC: 1

EC: 7

EC: .

EC: 1

EC: .

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	104
2706515	320	isoflavone reductase-like protein [Citru	1.0	0.325	0.823	2e-44
224154451	252	predicted protein [Populus trichocarpa]	0.961	0.396	0.678	2e-33
118488749	318	unknown [Populus trichocarpa]	0.961	0.314	0.678	2e-33
224145043	318	phenylcoumaran benzylic ether reductase	0.961	0.314	0.660	2e-33
224136057	318	phenylcoumaran benzylic ether reductase	0.961	0.314	0.669	1e-32
224166246	108	predicted protein [Populus trichocarpa]	0.942	0.907	0.672	2e-32
76559888	319	TPA: isoflavone reductase-like protein 2	0.913	0.297	0.615	3e-29
359475549	319	PREDICTED: eugenol synthase 1-like [Viti	0.913	0.297	0.615	3e-29
255579406	318	Isoflavone reductase, putative [Ricinus	0.942	0.308	0.616	1e-28
359475547	319	PREDICTED: eugenol synthase 1-like [Viti	0.971	0.316	0.563	6e-28

>gi|2706515|emb|CAA73220.1| isoflavone reductase-like protein [Citrus x paradisi]

 Score =  182 bits (463), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 93/113 (82%), Positives = 96/113 (84%), Gaps = 9/113 (7%)

Query: 1   MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--- 57
           MEGENTKPKILIFGGTGY GKYMVKASVSSGH TFVYARPVT+NSR SKLEIHKEFQ   
Sbjct: 1   MEGENTKPKILIFGGTGYFGKYMVKASVSSGHKTFVYARPVTQNSRPSKLEIHKEFQGIG 60

Query: 58  ------ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
                 ELDEHEKI+SILKEV VVISTV YPQ LDQLKIV AIKVAGNIK F+
Sbjct: 61  VTIIEGELDEHEKIVSILKEVDVVISTVTYPQCLDQLKIVHAIKVAGNIKRFL 113

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224154451|ref|XP_002337478.1| predicted protein [Populus trichocarpa] gi|222839435|gb|EEE77772.1| predicted protein [Populus trichocarpa]

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 85/109 (77%), Gaps = 9/109 (8%)

Query: 4   ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ------ 57
           EN   KILIFGGTGY+GKYMVKASVS GH T+VYARP+T  S  +K+ IHKEFQ      
Sbjct: 2   ENEMSKILIFGGTGYIGKYMVKASVSMGHKTYVYARPITTQSSPAKIGIHKEFQAMGVTI 61

Query: 58  ---ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
              E DE EKI+S+L+ V VVISTVAYPQ+LDQLKI++AIKVAGNIK F
Sbjct: 62  VQGEFDEQEKIVSVLRHVDVVISTVAYPQVLDQLKIIEAIKVAGNIKRF 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|118488749|gb|ABK96185.1| unknown [Populus trichocarpa]

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 74/109 (67%), Positives = 85/109 (77%), Gaps = 9/109 (8%)

Query: 4   ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ------ 57
           EN   KILIFGGTGY+GKYMVKASVS GH T+VYARP+T  S  +K+ IHKEFQ      
Sbjct: 2   ENEMSKILIFGGTGYIGKYMVKASVSMGHKTYVYARPITTQSSPAKIGIHKEFQAMGVTI 61

Query: 58  ---ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
              E DE EKI+S+L+ V VVISTVAYPQ+LDQLKI++AIKVAGNIK F
Sbjct: 62  VQGEFDEQEKIVSVLRHVDVVISTVAYPQVLDQLKIIEAIKVAGNIKRF 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224145043|ref|XP_002336195.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222832409|gb|EEE70886.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa]

 Score =  146 bits (368), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/109 (66%), Positives = 86/109 (78%), Gaps = 9/109 (8%)

Query: 4   ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ------ 57
           EN   KILIFGGTGY+GKYMVKASVS GH T++YARP+T  S  +K+ IHKEFQ      
Sbjct: 2   ENGTSKILIFGGTGYIGKYMVKASVSMGHKTYLYARPITTQSSPAKISIHKEFQAMGVTI 61

Query: 58  ---ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
              E DE EK++S+L++V VVISTVAYPQ+LDQLKI++AIKVAGNIK F
Sbjct: 62  VQGEFDEQEKLVSVLRDVDVVISTVAYPQVLDQLKIIEAIKVAGNIKRF 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224136057|ref|XP_002327370.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa] gi|222835740|gb|EEE74175.1| phenylcoumaran benzylic ether reductase -like protein [Populus trichocarpa]

 Score =  143 bits (361), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 73/109 (66%), Positives = 84/109 (77%), Gaps = 9/109 (8%)

Query: 4   ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ------ 57
           EN   KILIFGGTGYLGKYMVKASVS GH T+VYARP+T  S  +K+ I KEFQ      
Sbjct: 2   ENGTSKILIFGGTGYLGKYMVKASVSMGHKTYVYARPITTQSSPAKIGIRKEFQAMGVTI 61

Query: 58  ---ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
              E DE EK++S+L+ V VVISTVAYPQ+LDQLKI++AIKVAGNIK F
Sbjct: 62  VQGEFDEQEKLVSVLRHVDVVISTVAYPQVLDQLKIIEAIKVAGNIKRF 110

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224166246|ref|XP_002338906.1| predicted protein [Populus trichocarpa] gi|222873873|gb|EEF11004.1| predicted protein [Populus trichocarpa]

 Score =  142 bits (359), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 72/107 (67%), Positives = 83/107 (77%), Gaps = 9/107 (8%)

Query: 4   ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ------ 57
           EN   KILIFGGTGY+GKYMVKASVS GH T+VYAR +T  S  +K+ IHKEFQ      
Sbjct: 2   ENEMSKILIFGGTGYIGKYMVKASVSMGHKTYVYARSITTQSSPAKIGIHKEFQAMGVTI 61

Query: 58  ---ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIK 101
              E DE EKI+S+L+ V VVISTVAYPQ+LDQLKI++AIKVAGNIK
Sbjct: 62  VQGEFDEQEKIVSVLRHVDVVISTVAYPQVLDQLKIIEAIKVAGNIK 108

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|76559888|tpe|CAI56331.1| TPA: isoflavone reductase-like protein 2 [Vitis vinifera]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/104 (61%), Positives = 82/104 (78%), Gaps = 9/104 (8%)

Query: 10  ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ---------ELD 60
           ILIFGGTGY+G+YMVKASV  GH T+VY+RP+T  +  SK+E+ KEFQ         ELD
Sbjct: 8   ILIFGGTGYIGRYMVKASVKMGHPTYVYSRPMTPQTHPSKIELLKEFQSMGVNIVQGELD 67

Query: 61  EHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
           EHEK++S++++V VVIS +AYPQ+LDQLKI+DAIKVAG  K F+
Sbjct: 68  EHEKLVSVIQQVDVVISALAYPQVLDQLKIIDAIKVAGTSKRFL 111

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475549|ref|XP_003631700.1| PREDICTED: eugenol synthase 1-like [Vitis vinifera]

 Score =  132 bits (332), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 64/104 (61%), Positives = 82/104 (78%), Gaps = 9/104 (8%)

Query: 10  ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ---------ELD 60
           ILIFGGTGY+G+YMVKASV  GH T+VY+RP+T  +  SK+E+ KEFQ         ELD
Sbjct: 8   ILIFGGTGYIGRYMVKASVKMGHPTYVYSRPMTPQTHPSKIELLKEFQSMGVNIVQGELD 67

Query: 61  EHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
           EHEK++S++++V VVIS +AYPQ+LDQLKI+DAIKVAG  K F+
Sbjct: 68  EHEKLVSVIQQVDVVISALAYPQVLDQLKIIDAIKVAGTSKRFL 111

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579406|ref|XP_002530547.1| Isoflavone reductase, putative [Ricinus communis] gi|223529909|gb|EEF31838.1| Isoflavone reductase, putative [Ricinus communis]

 Score =  130 bits (326), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 66/107 (61%), Positives = 81/107 (75%), Gaps = 9/107 (8%)

Query: 7   KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--------- 57
           K KILI G TGYLGKYMVKAS+S GH T+ Y RP+  N+  SKL++H+EF+         
Sbjct: 5   KSKILIIGATGYLGKYMVKASISMGHPTYAYVRPLGLNTNLSKLQLHEEFESLGVTLFQG 64

Query: 58  ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
           ELDEHE+++SILK+V VVIST+A PQ LDQLKI+ A+K AGNIK FV
Sbjct: 65  ELDEHERLVSILKQVDVVISTLAVPQHLDQLKIITAMKDAGNIKRFV 111

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359475547|ref|XP_003631699.1| PREDICTED: eugenol synthase 1-like [Vitis vinifera]

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 82/110 (74%), Gaps = 9/110 (8%)

Query: 4   ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ------ 57
           E+   +ILIFGGTGY+G+YMVKASV  GH T+VY+RP+T  +  SK+E+ KEFQ      
Sbjct: 2   ESMLSRILIFGGTGYIGRYMVKASVKMGHPTYVYSRPMTPQTHPSKIELLKEFQSMDVNI 61

Query: 58  ---ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
              ELDEHEK++ ++++V VVI  +AYPQ+LDQLKI+DAI VAG  K F+
Sbjct: 62  VQGELDEHEKLVWVIQQVDVVILALAYPQVLDQLKIIDAINVAGTTKRFL 111

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	104
TAIR|locus:2025192	310	AT1G75280 [Arabidopsis thalian	0.942	0.316	0.433	4.6e-18
TAIR|locus:2136383	308	AT4G39230 [Arabidopsis thalian	0.942	0.318	0.471	2e-17
TAIR|locus:2025197	318	AT1G75290 [Arabidopsis thalian	0.942	0.308	0.405	9.5e-17
TAIR|locus:2025167	322	AT1G75300 [Arabidopsis thalian	0.942	0.304	0.377	5.4e-16
TAIR|locus:2031730	317	PRR1 "pinoresinol reductase 1"	0.980	0.321	0.347	6.7e-12
TAIR|locus:2139494	306	AT4G34540 [Arabidopsis thalian	1.0	0.339	0.355	2.8e-11
TAIR|locus:2016482	310	AT1G19540 [Arabidopsis thalian	0.923	0.309	0.358	2.9e-11
TAIR|locus:2119455	317	PRR2 "pinoresinol reductase 2"	0.951	0.312	0.344	6.9e-10
DICTYBASE|DDB_G0286833	328	DDB_G0286833 "3-beta-hydroxyst	0.682	0.216	0.267	0.00011
UNIPROTKB|Q71YS4	291	LMOf2365_1769 "Putative unchar	0.865	0.309	0.285	0.00019

TAIR|locus:2025192 AT1G75280 [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 46/106 (43%), Positives = 69/106 (65%)

Query:     7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKLEIHKEFQ------E 58
             K KIL+ GGTGY+GK++V+AS  +GH+TF   R  T +   +   ++  K+        +
Sbjct:     5 KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATLSDPVKGKTVQSFKDLGVTILHGD 64

Query:    59 LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
             L++HE ++  +K+V VVISTV   Q+LDQ KI+ AIK AGN+K F+
Sbjct:    65 LNDHESLVKAIKQVDVVISTVGSMQILDQTKIISAIKEAGNVKRFL 110

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0046686 "response to cadmium ion" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IGI;IEP

TAIR|locus:2136383 AT4G39230 [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 50/106 (47%), Positives = 68/106 (64%)

Query:     6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR--PVTENSRTSKLEIHK----EFQ-- 57
             +K KIL  GGTGY+GKY+V+AS  SGH T V  R   +T  SR+S +E  K    +F   
Sbjct:     3 SKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTSPSRSSTIENFKNLGVQFLLG 62

Query:    58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
             +LD+H  +++ +K+  VVISTV +  L  Q KI+ AIK AGN+K F
Sbjct:    63 DLDDHTSLVNSIKQADVVISTVGHSLLGHQYKIISAIKEAGNVKRF 108

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0032442 "phenylcoumaran benzylic ether reductase activity" evidence=ISS

GO:0046686 "response to cadmium ion" evidence=IEP

TAIR|locus:2025197 AT1G75290 [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 9.5e-17, P = 9.5e-17
 Identities = 43/106 (40%), Positives = 70/106 (66%)

Query:     7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP--VTENSRTSKLEIHKEFQ------E 58
             K KIL+ GGTG++GK +++ASV +GH+T    R   +++ ++   ++  K+F       +
Sbjct:     5 KSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASLSDPNKGKTVQNFKDFGVTLLHGD 64

Query:    59 LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
             L++HE ++  +K+  VVISTV   Q+LDQ KI+ AIK AGN+K F+
Sbjct:    65 LNDHESLVKAIKQADVVISTVGSMQILDQTKIISAIKEAGNVKRFL 110

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2025167 AT1G75300 [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 5.4e-16, P = 5.4e-16
 Identities = 40/106 (37%), Positives = 69/106 (65%)

Query:     7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP--VTENSRTSKLEIHKEFQ------E 58
             K KIL+ GGTGY+G+++V+ S  +G+ TF   R   +++  ++  ++  K+        +
Sbjct:     5 KSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASLSDPVKSKTIQSFKDLGVTILHGD 64

Query:    59 LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
             L++HE ++  +K+V VVIST+ + Q+ DQ KI+ AIK AGN+K F+
Sbjct:    65 LNDHESLVKAIKQVDVVISTIGHKQIFDQTKIISAIKEAGNVKRFL 110

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016651 "oxidoreductase activity, acting on NAD(P)H" evidence=ISS

TAIR|locus:2031730 PRR1 "pinoresinol reductase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 6.7e-12, P = 6.7e-12
 Identities = 41/118 (34%), Positives = 69/118 (58%)

Query:     2 EGENT-KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQEL- 59
             E + T K ++L+ G TGY+GK +V+A ++ GH T+V  RP        K+++   F++L 
Sbjct:     3 ESKRTEKTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEI-GLEIEKVQLFLSFKKLG 61

Query:    60 --------DEHEKIISILKEVGVVISTVA-----YPQLLDQLKIVDAIKVAGNIKVFV 104
                      +H+ ++S +K V VV+S ++        +L QLK+V+AIK AGN+K F+
Sbjct:    62 ARIVEGSFSDHQSLVSAVKLVDVVVSAMSGVHFRSHNILVQLKLVEAIKEAGNVKRFL 119

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2139494 AT4G34540 [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 38/107 (35%), Positives = 56/107 (52%)

Query:     1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE---IHKEFQ 57
             ME E  K ++LI G TG LG Y+ + S+ SGH TF   R  T + +   L    +     
Sbjct:     1 MEEEKKKSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSDKLKSLSDAGVTLLKG 60

Query:    58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
              L++   +   + +V VVIS +    +LDQ  +V  IK AG+IK F+
Sbjct:    61 SLEDEGSLAEAVSKVDVVISAIPSKHVLDQKLLVRVIKQAGSIKRFI 107

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS

TAIR|locus:2016482 AT1G19540 [Arabidopsis thaliana (taxid:3702)]

 Score = 159 (61.0 bits), Expect = 2.9e-11, P = 2.9e-11
 Identities = 38/106 (35%), Positives = 61/106 (57%)

Query:     9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARP--VTENSRTSKLEIHKE------FQELD 60
             KIL+ G TG +GK +V+ S  SGH TF   R   +++  +   +E  K+      +  L 
Sbjct:     4 KILVIGATGLIGKVLVEESAKSGHATFALVREASLSDPVKAQLVERFKDLGVTILYGSLS 63

Query:    61 EHEKIISILKEVGVVISTVA--YPQLLDQLKIVDAIKVAGNIKVFV 104
             + E ++  +K+V VVIS V     ++L+Q  I+DAIK +GN+K F+
Sbjct:    64 DKESLVKAIKQVDVVISAVGRFQTEILNQTNIIDAIKESGNVKRFL 109

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

TAIR|locus:2119455 PRR2 "pinoresinol reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 6.9e-10, P = 6.9e-10
 Identities = 40/116 (34%), Positives = 64/116 (55%)

Query:     3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQEL--- 59
             GE T+  +L+ GGTG LG+ +V A ++ GH T+V  RP        K+++   F+ L   
Sbjct:     7 GEKTR--VLVVGGTGSLGRRIVSACLAEGHETYVLQRPEI-GVDIEKVQLLLSFKRLGAH 63

Query:    60 ------DEHEKIISILKEVGVVISTVAYPQLLD-----QLKIVDAIKVAGNIKVFV 104
                    +H+ ++S +K+V VV+S ++           QLK+V AIK AGN+K F+
Sbjct:    64 LVEGSFSDHQSLVSAVKQVDVVVSAMSGVHFRTHNIPVQLKLVAAIKEAGNVKRFL 119

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0010283 "pinoresinol reductase activity" evidence=ISS;IDA

GO:0009807 "lignan biosynthetic process" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

DICTYBASE|DDB_G0286833 DDB_G0286833 "3-beta-hydroxysteroid dehydrogenase" [Dictyostelium discoideum (taxid:44689)]

 Score = 100 (40.3 bits), Expect = 0.00011, P = 0.00011
 Identities = 19/71 (26%), Positives = 37/71 (52%)

Query:    10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL 69
             + + GG+G+LGKY+++  +S+G+  F  +R  T N   S++        L + + +   +
Sbjct:     4 VFLTGGSGFLGKYIIEELISNGYKVFALSRSETSNKVLSQMGATPVMSSLHDEQGLTEAI 63

Query:    70 KEVGVVISTVA 80
             K   +VI   A
Sbjct:    64 KGCDIVIHCAA 74

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0006694 "steroid biosynthetic process" evidence=IEA

GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016126 "sterol biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008203 "cholesterol metabolic process" evidence=IEA

GO:0008202 "steroid metabolic process" evidence=IEA

GO:0006695 "cholesterol biosynthetic process" evidence=IEA

GO:0006629 "lipid metabolic process" evidence=IEA

UNIPROTKB|Q71YS4 LMOf2365_1769 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)]

 Score = 97 (39.2 bits), Expect = 0.00019, P = 0.00019
 Identities = 28/98 (28%), Positives = 50/98 (51%)

Query:     9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
             KIL+FGGT + GK +V+  VS GH   +  R  TE++    ++  +     +  + +  +
Sbjct:     2 KILVFGGTRFFGKKLVERLVSEGHEVTIGTRGKTEDNFGDTVK--RVILNRESRDALFQL 59

Query:    69 LKEV-GVVISTVAY-PQLLDQLKIVDAIKVAGNIKVFV 104
              KE   V+   + + P+  + L  VDA K  G +K ++
Sbjct:    60 AKEDWDVIYDNICFSPK--EALYAVDAFK--GKVKRYI 93

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: grail3.9071000102 hypothetical protein (252 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	104
pfam05368	232	pfam05368, NmrA, NmrA-like family	4e-24
cd05259	282	cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe	4e-21
PLN02657	390	PLN02657, PLN02657, 3,8-divinyl protochlorophyllid	6e-08
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-06
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	5e-05
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	2e-04
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	5e-04
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	0.001
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.002

>gnl|CDD|191263 pfam05368, NmrA, NmrA-like family

 Score = 91.2 bits (227), Expect = 4e-24
 Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 20/107 (18%)

Query: 10  ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ---------ELD 60
           IL+FG TGY G  +V+AS+ +GH      R         K E+ K  +         +LD
Sbjct: 1   ILVFGATGYQGGSVVRASLKAGHPVRALVRD-------PKSELAKSLKAAGVELVEGDLD 53

Query: 61  EHEKIISILKEVGVVISTVAY---PQLLDQLKIVDAIKVAGNIKVFV 104
           +HE ++  LK V VV S   +    ++ D  K+ DA K AG +K F+
Sbjct: 54  DHESLVEALKGVDVVFSVTGFWLSKEIEDGKKLADAAKEAG-VKHFI 99

NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232

>gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs

 Score = 84.3 bits (209), Expect = 4e-21
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 6/94 (6%)

Query: 9  KILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENS---RTSKLEIHKEFQELDEHEK 64
          KI I G TG LG  +V A ++S G    V  RP + +S   + S +++     +   HE 
Sbjct: 1  KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVPV--DYASHES 58

Query: 65 IISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG 98
          +++ LK V  VIS +    + DQLK++DA   AG
Sbjct: 59 LVAALKGVDAVISALGGAAIGDQLKLIDAAIAAG 92

PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282

>gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase

 Score = 48.2 bits (115), Expect = 6e-08
 Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 12/90 (13%)

Query: 3   GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRTSKLEIHKEFQ---- 57
            E     +L+ G TGY+GK++V+  V  G+N    AR  +    +  K +  KE      
Sbjct: 56  KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEV 115

Query: 58  ---ELDEHEKIISILKEVG----VVISTVA 80
              ++ + + +  +L   G    VV+S +A
Sbjct: 116 VFGDVTDADSLRKVLFSEGDPVDVVVSCLA 145

Length = 390

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 21/98 (21%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL 69
          ILI G TG++G+ + +  +  GH   +  R     S+  +  +     +L + + +   +
Sbjct: 1  ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEGDLRDLDSLSDAV 60

Query: 70 KEVGVVISTVAYPQLLD---------QLKIVDAIKVAG 98
          + V VVI     P+               +++A K AG
Sbjct: 61 QGVDVVIHLAGAPRDTRDFCEVDVEGTRNVLEAAKEAG 98

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 40.0 bits (94), Expect = 5e-05
 Identities = 15/37 (40%), Positives = 25/37 (67%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS 45
          KILI GGT ++GK +V+  +++GH+  V+ R  T+  
Sbjct: 2  KILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKPD 38

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 38.0 bits (89), Expect = 2e-04
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 19/110 (17%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ----ELDEHEK 64
           K+L+ G TG +G+++V+  +  G+      R     S+  KLE     +    +L + E 
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVRD---PSQAEKLE-AAGAEVVVGDLTDAES 56

Query: 65  IISILKEVGVVISTV-------AYPQLLD---QLKIVDAIKVAGNIKVFV 104
           + + L+ +  VIS            + +D    + ++DA K AG +K FV
Sbjct: 57  LAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNINLIDAAKKAG-VKRFV 105

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 11/105 (10%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRTSKLEIHKEFQELDEHEKIIS 67
           KI I G TG  G  +V+ +++ GH      R P    +   KL++ +   ++ + E +  
Sbjct: 1   KIAIIGATGRTGSAIVREALARGHEVTALVRDPAKLPAEHEKLKVVQ--GDVLDLEDVKE 58

Query: 68  ILKEVGVVISTVAYPQLLDQLK--------IVDAIKVAGNIKVFV 104
            L+    VIS +     L            IV A+K AG  ++ V
Sbjct: 59  ALEGQDAVISALGTRNDLSPTTLHSEGTRNIVSAMKAAGVKRLIV 103

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 36.1 bits (83), Expect = 0.001
 Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELD--EHEKII 66
          +IL+ GG G++G ++V+  +++GH+     R          L    EF  LD  + + + 
Sbjct: 2  RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDP---LLSGVEFVVLDLTDRDLVD 58

Query: 67 SILKEVGVVI 76
           + K V   +
Sbjct: 59 ELAKGVPDAV 68

Length = 314

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 35.3 bits (82), Expect = 0.002
 Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 12/75 (16%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
          KILI G TG LG+ +V+     G+   V     T  SR S  ++     +L + + +   
Sbjct: 1  KILITGATGMLGRALVRLLKERGYE--VIG---TGRSRASLFKL-----DLTDPDAVEEA 50

Query: 69 LKEV--GVVISTVAY 81
          +++    V+I+  AY
Sbjct: 51 IRDYKPDVIINCAAY 65

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	104
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.84
CHL00194	317	ycf39 Ycf39; Provisional	99.74
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.73
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.71
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.7
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.65
PLN02214	342	cinnamoyl-CoA reductase	99.65
PLN00198	338	anthocyanidin reductase; Provisional	99.64
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.63
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.63
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.62
PLN02427	386	UDP-apiose/xylose synthase	99.62
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.62
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.61
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.61
PLN02650	351	dihydroflavonol-4-reductase	99.6
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.6
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.59
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.58
PLN02686	367	cinnamoyl-CoA reductase	99.57
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.57
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.55
PLN02572	442	UDP-sulfoquinovose synthase	99.55
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.55
PLN03209	576	translocon at the inner envelope of chloroplast su	99.55
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.55
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.54
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.54
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.54
PLN02240	352	UDP-glucose 4-epimerase	99.54
COG2910	211	Putative NADH-flavin reductase [General function p	99.54
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.53
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.53
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.53
PLN02653	340	GDP-mannose 4,6-dehydratase	99.52
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.51
PLN02206	442	UDP-glucuronate decarboxylase	99.5
PLN02583	297	cinnamoyl-CoA reductase	99.5
PRK05865	854	hypothetical protein; Provisional	99.5
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.49
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.49
PLN02260	668	probable rhamnose biosynthetic enzyme	99.47
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.47
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.46
PRK06179	270	short chain dehydrogenase; Provisional	99.46
PRK12320	699	hypothetical protein; Provisional	99.46
PLN02778	298	3,5-epimerase/4-reductase	99.45
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.43
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.43
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.43
PRK06182	273	short chain dehydrogenase; Validated	99.43
PLN00016	378	RNA-binding protein; Provisional	99.42
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.4
PRK07201	657	short chain dehydrogenase; Provisional	99.39
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.39
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.37
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.37
PRK05993	277	short chain dehydrogenase; Provisional	99.37
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.37
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.36
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.36
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.36
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.35
PRK06180	277	short chain dehydrogenase; Provisional	99.34
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.34
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.34
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.33
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.33
PRK12367	245	short chain dehydrogenase; Provisional	99.33
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.33
PRK08628	258	short chain dehydrogenase; Provisional	99.32
PLN02996	491	fatty acyl-CoA reductase	99.32
PRK06398	258	aldose dehydrogenase; Validated	99.32
PRK06482	276	short chain dehydrogenase; Provisional	99.32
PRK09291	257	short chain dehydrogenase; Provisional	99.31
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	99.3
PRK05875	276	short chain dehydrogenase; Provisional	99.3
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.3
PRK12829	264	short chain dehydrogenase; Provisional	99.3
PRK07577	234	short chain dehydrogenase; Provisional	99.3
PRK12828	239	short chain dehydrogenase; Provisional	99.3
PRK06196	315	oxidoreductase; Provisional	99.29
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.29
PRK06194	287	hypothetical protein; Provisional	99.29
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.29
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.29
PRK08177	225	short chain dehydrogenase; Provisional	99.28
PRK09186	256	flagellin modification protein A; Provisional	99.28
PRK08219	227	short chain dehydrogenase; Provisional	99.28
PRK08263	275	short chain dehydrogenase; Provisional	99.28
PRK07060	245	short chain dehydrogenase; Provisional	99.28
PRK06057	255	short chain dehydrogenase; Provisional	99.27
PRK09135	249	pteridine reductase; Provisional	99.27
PRK06138	252	short chain dehydrogenase; Provisional	99.27
PRK07856	252	short chain dehydrogenase; Provisional	99.27
PRK07063	260	short chain dehydrogenase; Provisional	99.26
PRK06172	253	short chain dehydrogenase; Provisional	99.26
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.26
PRK08267	260	short chain dehydrogenase; Provisional	99.26
PRK07825	273	short chain dehydrogenase; Provisional	99.25
PRK07814	263	short chain dehydrogenase; Provisional	99.25
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.25
PRK07806	248	short chain dehydrogenase; Provisional	99.25
PRK05693	274	short chain dehydrogenase; Provisional	99.25
PRK06914	280	short chain dehydrogenase; Provisional	99.25
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.25
PRK06523	260	short chain dehydrogenase; Provisional	99.25
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.24
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.24
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.24
PRK10538	248	malonic semialdehyde reductase; Provisional	99.23
PLN02503	605	fatty acyl-CoA reductase 2	99.23
PRK12939	250	short chain dehydrogenase; Provisional	99.23
PLN02260	668	probable rhamnose biosynthetic enzyme	99.23
PRK12746	254	short chain dehydrogenase; Provisional	99.23
PRK08265	261	short chain dehydrogenase; Provisional	99.22
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.22
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.22
PRK07774	250	short chain dehydrogenase; Provisional	99.21
PRK07109	334	short chain dehydrogenase; Provisional	99.21
PRK08264	238	short chain dehydrogenase; Validated	99.21
PRK05866	293	short chain dehydrogenase; Provisional	99.21
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.2
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.2
PRK07890	258	short chain dehydrogenase; Provisional	99.2
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.2
PRK06500	249	short chain dehydrogenase; Provisional	99.2
PRK05876	275	short chain dehydrogenase; Provisional	99.2
PRK09072	263	short chain dehydrogenase; Provisional	99.2
PRK07326	237	short chain dehydrogenase; Provisional	99.19
PRK07062	265	short chain dehydrogenase; Provisional	99.19
PRK12827	249	short chain dehydrogenase; Provisional	99.19
PRK06197	306	short chain dehydrogenase; Provisional	99.19
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.19
PRK06139	330	short chain dehydrogenase; Provisional	99.19
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.19
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.19
PRK07067	257	sorbitol dehydrogenase; Provisional	99.18
PRK08339	263	short chain dehydrogenase; Provisional	99.18
PLN02253	280	xanthoxin dehydrogenase	99.18
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.18
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.18
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.18
PRK08278	273	short chain dehydrogenase; Provisional	99.17
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.17
PRK07478	254	short chain dehydrogenase; Provisional	99.17
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.17
PRK07024	257	short chain dehydrogenase; Provisional	99.16
PRK07023	243	short chain dehydrogenase; Provisional	99.16
PRK05717	255	oxidoreductase; Validated	99.16
PRK05650	270	short chain dehydrogenase; Provisional	99.16
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.16
PRK08251	248	short chain dehydrogenase; Provisional	99.16
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.15
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.15
PRK06128	300	oxidoreductase; Provisional	99.15
PRK07454	241	short chain dehydrogenase; Provisional	99.15
PRK05884	223	short chain dehydrogenase; Provisional	99.15
PRK08017	256	oxidoreductase; Provisional	99.15
PRK07576	264	short chain dehydrogenase; Provisional	99.14
PRK05867	253	short chain dehydrogenase; Provisional	99.14
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.14
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	99.14
PRK06841	255	short chain dehydrogenase; Provisional	99.13
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.13
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.13
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.13
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.13
PRK07074	257	short chain dehydrogenase; Provisional	99.12
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.12
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.12
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.12
PRK08643	256	acetoin reductase; Validated	99.11
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.11
PRK06483	236	dihydromonapterin reductase; Provisional	99.11
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.11
PRK07102	243	short chain dehydrogenase; Provisional	99.11
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.1
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.1
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.1
PRK06949	258	short chain dehydrogenase; Provisional	99.09
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.09
PRK08226	263	short chain dehydrogenase; Provisional	99.09
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.09
PRK06181	263	short chain dehydrogenase; Provisional	99.09
PRK05854	313	short chain dehydrogenase; Provisional	99.09
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.09
PRK06198	260	short chain dehydrogenase; Provisional	99.08
PRK07775	274	short chain dehydrogenase; Provisional	99.08
PRK06125	259	short chain dehydrogenase; Provisional	99.08
PRK06114	254	short chain dehydrogenase; Provisional	99.07
PRK06101	240	short chain dehydrogenase; Provisional	99.07
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.07
PRK08589	272	short chain dehydrogenase; Validated	99.07
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	99.07
PRK06953	222	short chain dehydrogenase; Provisional	99.07
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.07
PRK07069	251	short chain dehydrogenase; Validated	99.07
PRK12742	237	oxidoreductase; Provisional	99.06
PTZ00325	321	malate dehydrogenase; Provisional	99.06
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.06
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.06
PRK12937	245	short chain dehydrogenase; Provisional	99.06
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.05
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.05
PRK12743	256	oxidoreductase; Provisional	99.04
PRK07035	252	short chain dehydrogenase; Provisional	99.04
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.03
PRK06701	290	short chain dehydrogenase; Provisional	99.03
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.03
PRK09134	258	short chain dehydrogenase; Provisional	99.02
PRK06720	169	hypothetical protein; Provisional	99.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.0
PRK05872	296	short chain dehydrogenase; Provisional	99.0
PRK08703	239	short chain dehydrogenase; Provisional	98.99
PRK09242	257	tropinone reductase; Provisional	98.99
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	98.99
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	98.99
PRK07985	294	oxidoreductase; Provisional	98.99
PRK12744	257	short chain dehydrogenase; Provisional	98.98
PRK06924	251	short chain dehydrogenase; Provisional	98.98
PRK08324	681	short chain dehydrogenase; Validated	98.97
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	98.97
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.97
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	98.97
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.97
PRK07904	253	short chain dehydrogenase; Provisional	98.97
PRK06947	248	glucose-1-dehydrogenase; Provisional	98.96
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	98.96
PRK05855	582	short chain dehydrogenase; Validated	98.96
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	98.96
PRK07201	657	short chain dehydrogenase; Provisional	98.96
PRK07832	272	short chain dehydrogenase; Provisional	98.95
PRK07677	252	short chain dehydrogenase; Provisional	98.95
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	98.95
PRK09620	229	hypothetical protein; Provisional	98.95
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	98.94
PRK07791	286	short chain dehydrogenase; Provisional	98.94
PRK06123	248	short chain dehydrogenase; Provisional	98.93
PRK09009	235	C factor cell-cell signaling protein; Provisional	98.93
PRK08862	227	short chain dehydrogenase; Provisional	98.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	98.92
PRK08303	305	short chain dehydrogenase; Provisional	98.91
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	98.91
PRK07831	262	short chain dehydrogenase; Provisional	98.91
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	98.9
PRK06484	520	short chain dehydrogenase; Validated	98.9
PRK07578	199	short chain dehydrogenase; Provisional	98.9
PRK12747	252	short chain dehydrogenase; Provisional	98.9
PLN00106	323	malate dehydrogenase	98.9
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	98.89
PRK08309	177	short chain dehydrogenase; Provisional	98.89
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.89
PRK06484	520	short chain dehydrogenase; Validated	98.88
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	98.87
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	98.86
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	98.84
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	98.84
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	98.84
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	98.83
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.83
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	98.83
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	98.82
PRK06940	275	short chain dehydrogenase; Provisional	98.82
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.82
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.82
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.81
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	98.8
PRK07041	230	short chain dehydrogenase; Provisional	98.8
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	98.78
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.77
COG3268	382	Uncharacterized conserved protein [Function unknow	98.77
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.74
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	98.74
PRK14982	340	acyl-ACP reductase; Provisional	98.73
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.72
KOG1208	314	consensus Dehydrogenases with different specificit	98.72
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.71
PLN02780	320	ketoreductase/ oxidoreductase	98.7
PRK05599	246	hypothetical protein; Provisional	98.7
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.69
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	98.68
PRK05086	312	malate dehydrogenase; Provisional	98.68
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.66
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	98.65
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	98.63
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.62
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	98.62
COG1028	251	FabG Dehydrogenases with different specificities (	98.61
PLN00015	308	protochlorophyllide reductase	98.57
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	98.56
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	98.55
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	98.53
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	98.53
KOG0725	270	consensus Reductases with broad range of substrate	98.53
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.52
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	98.52
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	98.47
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	98.45
PRK00048	257	dihydrodipicolinate reductase; Provisional	98.45
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	98.45
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	98.44
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	98.42
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.41
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	98.41
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	98.41
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	98.39
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	98.38
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.38
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.37
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	98.37
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	98.35
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	98.35
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	98.34
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.34
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	98.34
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	98.33
PLN02383	344	aspartate semialdehyde dehydrogenase	98.31
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.31
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	98.3
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	98.29
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	98.28
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	98.27
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	98.27
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.27
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.25
PRK10669	558	putative cation:proton antiport protein; Provision	98.24
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	98.23
PRK04148	134	hypothetical protein; Provisional	98.23
PRK09496	453	trkA potassium transporter peripheral membrane com	98.23
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	98.22
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.22
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.21
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	98.21
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	98.21
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.2
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	98.19
PRK13940	414	glutamyl-tRNA reductase; Provisional	98.19
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	98.18
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.18
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	98.18
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.17
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	98.17
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	98.16
KOG1611	249	consensus Predicted short chain-type dehydrogenase	98.16
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	98.16
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	98.16
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.15
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	98.14
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.14
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.13
PRK03659	601	glutathione-regulated potassium-efflux system prot	98.12
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	98.12
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	98.12
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	98.11
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	98.11
PRK07574	385	formate dehydrogenase; Provisional	98.11
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.11
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.11
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	98.1
PRK08655	437	prephenate dehydrogenase; Provisional	98.1
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	98.1
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	98.1
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	98.1
PRK09496	453	trkA potassium transporter peripheral membrane com	98.1
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	98.1
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	98.1
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	98.09
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.09
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	98.08
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	98.08
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.08
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	98.08
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	98.07
PLN02928	347	oxidoreductase family protein	98.07
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	98.07
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	98.07
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	98.06
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.06
PLN03139	386	formate dehydrogenase; Provisional	98.06
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	98.06
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	98.05
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	98.04
PRK06487	317	glycerate dehydrogenase; Provisional	98.04
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	98.03
PRK06436	303	glycerate dehydrogenase; Provisional	98.03
PRK13243	333	glyoxylate reductase; Reviewed	98.02
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	98.02
PLN00203	519	glutamyl-tRNA reductase	98.02
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.01
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	98.01
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	98.01
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	98.01
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	98.01
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	98.0
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.0
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.99
PRK08223	287	hypothetical protein; Validated	97.99
PTZ00345	365	glycerol-3-phosphate dehydrogenase; Provisional	97.99
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.98
PRK12480	330	D-lactate dehydrogenase; Provisional	97.98
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.98
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	97.98
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.98
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.97
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.97
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.97
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.96
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.96
PRK07417	279	arogenate dehydrogenase; Reviewed	97.96
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	97.95
PRK03562	621	glutathione-regulated potassium-efflux system prot	97.95
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.94
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	97.94
KOG0409	327	consensus Predicted dehydrogenase [General functio	97.94
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	97.93
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	97.93
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	97.93
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.92
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.92
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	97.92
PRK06932	314	glycerate dehydrogenase; Provisional	97.91
PRK05479	330	ketol-acid reductoisomerase; Provisional	97.9
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.9
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.88
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	97.88
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.87
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.87
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.86
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	97.86
PRK13304	265	L-aspartate dehydrogenase; Reviewed	97.86
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	97.86
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	97.86
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	97.84
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.84
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.83
PRK15438	378	erythronate-4-phosphate dehydrogenase PdxB; Provis	97.83
PRK06928	277	pyrroline-5-carboxylate reductase; Reviewed	97.83
PTZ00117	319	malate dehydrogenase; Provisional	97.83
PRK05442	326	malate dehydrogenase; Provisional	97.83
PLN02688	266	pyrroline-5-carboxylate reductase	97.82
PRK06223	307	malate dehydrogenase; Reviewed	97.82
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	97.82
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	97.81
PRK08605	332	D-lactate dehydrogenase; Validated	97.81
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.81
TIGR01745	366	asd_gamma aspartate-semialdehyde dehydrogenase, ga	97.81
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.8
PRK06545	359	prephenate dehydrogenase; Validated	97.8
PRK11790	409	D-3-phosphoglycerate dehydrogenase; Provisional	97.8
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.79
PRK00257	381	erythronate-4-phosphate dehydrogenase; Validated	97.79
PRK13403	335	ketol-acid reductoisomerase; Provisional	97.78
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.77
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	97.77
TIGR00465	314	ilvC ketol-acid reductoisomerase. This is the seco	97.76
PRK08818	370	prephenate dehydrogenase; Provisional	97.76
PRK08300	302	acetaldehyde dehydrogenase; Validated	97.76
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.75
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	97.75
TIGR00036	266	dapB dihydrodipicolinate reductase.	97.75
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.74
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	97.73
PRK06444	197	prephenate dehydrogenase; Provisional	97.72
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	97.72
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.72
PRK06719	157	precorrin-2 dehydrogenase; Validated	97.72
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.71
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.71
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	97.71
PRK13303	265	L-aspartate dehydrogenase; Provisional	97.71
PLN02256	304	arogenate dehydrogenase	97.71
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	97.71
PTZ00075	476	Adenosylhomocysteinase; Provisional	97.71
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.7
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	97.7
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	97.7
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	97.7
PLN02948	577	phosphoribosylaminoimidazole carboxylase	97.69
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	97.68
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.68
PRK14851	679	hypothetical protein; Provisional	97.67
PLN02602	350	lactate dehydrogenase	97.67
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	97.66
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.66
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	97.66
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	97.65
PRK08328	231	hypothetical protein; Provisional	97.65
PLN02353	473	probable UDP-glucose 6-dehydrogenase	97.64
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	97.63
PRK15059	292	tartronate semialdehyde reductase; Provisional	97.63
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	97.63
COG0771	448	MurD UDP-N-acetylmuramoylalanine-D-glutamate ligas	97.62
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.62
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.62
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	97.61

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.84  E-value=1.7e-20  Score=120.67  Aligned_cols=99  Identities=21%  Similarity=0.293  Sum_probs=80.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc---ccccc----ccccc-ccccChHHHHHhhccccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR---TSKLE----IHKEF-QELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~---~~~~~----~~~~~-~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      .+++++||||+||||+++++.|+.+||.|.+..|++++.+.   ....+    ....+ .|+.|++++.+++++||.|||
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH   84 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH   84 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence            45799999999999999999999999999999999887422   11111    11111 299999999999999999999


Q ss_pred             cccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQ--------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~--------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|.+..              +.++.+++++|++..+|+|+|
T Consensus        85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV  125 (327)
T KOG1502|consen   85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVV  125 (327)
T ss_pred             eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEE
Confidence            998854              467889999999987899975

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.74  E-value=1.2e-17  Score=108.34  Aligned_cols=96  Identities=23%  Similarity=0.349  Sum_probs=73.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      |+|+|+||||++|+++++.|+++|++|+++.|+.................|+.|++++.+++.++|+|||+++...    
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~   80 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY   80 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence            4799999999999999999999999999999986443111111111111389999999999999999999986432    


Q ss_pred             ------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                            ...+.++++++.+++ ++|||
T Consensus        81 ~~~~~~~~~~~~l~~aa~~~g-vkr~I  106 (317)
T CHL00194         81 NAKQIDWDGKLALIEAAKAAK-IKRFI  106 (317)
T ss_pred             chhhhhHHHHHHHHHHHHHcC-CCEEE
Confidence                  345679999999987 88875

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.73  E-value=1.7e-17  Score=106.25  Aligned_cols=93  Identities=25%  Similarity=0.369  Sum_probs=73.4

Q ss_pred             EEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcc--cccccccccc-cccccChHHHHHhhccccEEEEcccCcC--
Q 046878           11 LIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENS--RTSKLEIHKE-FQELDEHEKIISILKEVGVVISTVAYPQ--   83 (104)
Q Consensus        11 ~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~--~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~~--   83 (104)
                      +||||+||+|++++++|+++|  +.|.++++.+....  .......... ..|+.|.+++.++++++|+|||+|++..  
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~~   80 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPPW   80 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCcccccc
Confidence            589999999999999999999  68988888765431  1111221111 2399999999999999999999998643  


Q ss_pred             ------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                  +.++++++++|++.+ |+|||
T Consensus        81 ~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlV  112 (280)
T PF01073_consen   81 GDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLV  112 (280)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence                        578899999999987 99975

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.71  E-value=1.3e-16  Score=96.14  Aligned_cols=92  Identities=28%  Similarity=0.465  Sum_probs=75.0

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC--hhhH
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ--LLDQ   87 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~--~~~~   87 (104)
                      |+|+||||++|+.++++|+++|++|+++.|++++.+.....+..  ..|+.|++++.++++++|+||+++|...  ....
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~~~~~~~~--~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~~   78 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAEDSPGVEII--QGDLFDPDSVKAALKGADAVIHAAGPPPKDVDAA   78 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHHCTTEEEE--ESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhcccccccccc--eeeehhhhhhhhhhhhcchhhhhhhhhccccccc
Confidence            78999999999999999999999999999998765321122211  1389999999999999999999998754  4556


Q ss_pred             HHHHHHHHHhCCcccCC
Q 046878           88 LKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        88 ~~l~~~~~~~~~v~~~i  104 (104)
                      .++++++++.+ ++|+|
T Consensus        79 ~~~~~a~~~~~-~~~~v   94 (183)
T PF13460_consen   79 KNIIEAAKKAG-VKRVV   94 (183)
T ss_dssp             HHHHHHHHHTT-SSEEE
T ss_pred             ccccccccccc-cccce
Confidence            78999999887 88764

...

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.70  E-value=2.1e-16  Score=103.75  Aligned_cols=99  Identities=14%  Similarity=0.139  Sum_probs=74.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-c----cc-----cccccc-cccccChHHHHHhhcccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-T----SK-----LEIHKE-FQELDEHEKIISILKEVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~----~~-----~~~~~~-~~d~~~~~~~~~~~~~~d   73 (104)
                      +++++++||||+||+|+++++.|+++|++|++++|....... .    ..     ...... ..|+.|.+.+.++++++|
T Consensus        13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d   92 (348)
T PRK15181         13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD   92 (348)
T ss_pred             ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence            456899999999999999999999999999999886533210 0    00     001111 138889889999999999


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|||+|+...               +.++.++++++++.+ +++||
T Consensus        93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v  137 (348)
T PRK15181         93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFT  137 (348)
T ss_pred             EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence            9999998643               346779999999886 88764

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.65  E-value=1.8e-15  Score=100.26  Aligned_cols=98  Identities=18%  Similarity=0.274  Sum_probs=72.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC--
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ--   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~--   83 (104)
                      ++|+|+|+|++||+|+++++.|.++|++|++++|..................|+.+.+.+...+.++|+|||+++...  
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~~~~~   99 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVMENCLKVTKGVDHVFNLAADMGGM   99 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCHHHHHHHHhCCCEEEEcccccCCc
Confidence            457899999999999999999999999999999864321010000001112388888888888889999999997531  


Q ss_pred             --------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                    ...+.++++++.+.+ +++||
T Consensus       100 ~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V  133 (370)
T PLN02695        100 GFIQSNHSVIMYNNTMISFNMLEAARING-VKRFF  133 (370)
T ss_pred             cccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence                          335678999998886 88764

>PLN02214 cinnamoyl-CoA reductase

Probab=99.65  E-value=1.6e-15  Score=99.53  Aligned_cols=98  Identities=18%  Similarity=0.218  Sum_probs=74.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--ccc----cccccc-ccccChHHHHHhhccccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--SKL----EIHKEF-QELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--~~~----~~~~~~-~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      ++++++|+||+|++|+++++.|+++|++|+++.|+.......  ...    .....+ .|+.+.+.+.++++++|+|||+
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~   88 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT   88 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence            456899999999999999999999999999999876432100  000    011111 3888999999999999999999


Q ss_pred             ccCcC----------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+...          +..+.++++++.+.+ ++|||
T Consensus        89 A~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V  123 (342)
T PLN02214         89 ASPVTDDPEQMVEPAVNGAKFVINAAAEAK-VKRVV  123 (342)
T ss_pred             cCCCCCCHHHHHHHHHHHHHHHHHHHHhcC-CCEEE
Confidence            98743          346789999998886 77764

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.64  E-value=2.2e-15  Score=98.50  Aligned_cols=101  Identities=18%  Similarity=0.274  Sum_probs=72.2

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc---cccc---ccccc-ccccChHHHHHhhccccEEE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT---SKLE---IHKEF-QELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~---~~~~---~~~~~-~d~~~~~~~~~~~~~~d~vv   76 (104)
                      .+.+++++||||+||+|+++++.|+++|++|.++.|++......   ....   ....+ .|+.|++.+.+.++++|+||
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   85 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF   85 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence            35567999999999999999999999999998888876432110   0010   11111 38889999999999999999


Q ss_pred             EcccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878           77 STVAYPQ--------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        77 ~~a~~~~--------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+|+...              +..+.++++++.+.+.+++||
T Consensus        86 h~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v  127 (338)
T PLN00198         86 HVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVI  127 (338)
T ss_pred             EeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Confidence            9998532              223457888877653366654

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.63  E-value=3.5e-15  Score=95.51  Aligned_cols=92  Identities=15%  Similarity=0.199  Sum_probs=73.3

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh------cc-ccEEEEcccC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL------KE-VGVVISTVAY   81 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~-~d~vv~~a~~   81 (104)
                      +|+|+||||++|++++++|++.|++|++++|+++.... ....  ....|+.|++++..++      .+ +|.+|++++.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~-~~~~--~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~   77 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG-PNEK--HVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPP   77 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC-CCCc--cccccCCCHHHHHHHHhcccCcCCceeEEEEeCCC
Confidence            48999999999999999999999999999999865421 1111  1123899999999988      56 9999999885


Q ss_pred             cC--hhhHHHHHHHHHHhCCcccCC
Q 046878           82 PQ--LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        82 ~~--~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ..  .....++++++++++ ++|||
T Consensus        78 ~~~~~~~~~~~i~aa~~~g-v~~~V  101 (285)
T TIGR03649        78 IPDLAPPMIKFIDFARSKG-VRRFV  101 (285)
T ss_pred             CCChhHHHHHHHHHHHHcC-CCEEE
Confidence            43  345678999999997 88875

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.63  E-value=2.1e-15  Score=97.79  Aligned_cols=97  Identities=20%  Similarity=0.258  Sum_probs=71.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-------cccccc-ccccChHHHHHhhccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-------EIHKEF-QELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-------~~~~~~-~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      .++|+||||+|++|+++++.|+++|++|+++.|+..........       .....+ .|+.+++.+.++++++|+|||+
T Consensus         4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~   83 (322)
T PLN02662          4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT   83 (322)
T ss_pred             CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence            36899999999999999999999999999998876432111100       011111 3888888999999999999999


Q ss_pred             ccCcC--------------hhhHHHHHHHHHHh-CCcccCC
Q 046878           79 VAYPQ--------------LLDQLKIVDAIKVA-GNIKVFV  104 (104)
Q Consensus        79 a~~~~--------------~~~~~~l~~~~~~~-~~v~~~i  104 (104)
                      |+...              +..+.++++++.+. + ++|||
T Consensus        84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v  123 (322)
T PLN02662         84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVV  123 (322)
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEE
Confidence            98531              34566888888876 5 77764

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.62  E-value=1.2e-15  Score=95.25  Aligned_cols=94  Identities=31%  Similarity=0.439  Sum_probs=72.4

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc--ccccccccccccccChHHHHHhhccccEEEEcccC---cCh
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY---PQL   84 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~---~~~   84 (104)
                      |+|+||+|.+|+.+++.|++.+++|.++.|++.....  ...........|+.|++++.++++++|.||.+.+.   ...
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~~~~~   80 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDPESLVAALKGVDAVFSVTPPSHPSEL   80 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSCSCCCHH
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCHHHHHHHHcCCceEEeecCcchhhhh
Confidence            7899999999999999999999999999999743211  11111111123899999999999999999999994   346


Q ss_pred             hhHHHHHHHHHHhCCcccCC
Q 046878           85 LDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        85 ~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ..+.++++++++++ |++||
T Consensus        81 ~~~~~li~Aa~~ag-Vk~~v   99 (233)
T PF05368_consen   81 EQQKNLIDAAKAAG-VKHFV   99 (233)
T ss_dssp             HHHHHHHHHHHHHT--SEEE
T ss_pred             hhhhhHHHhhhccc-cceEE
Confidence            77889999999998 99975

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.62  E-value=3.9e-15  Score=98.91  Aligned_cols=98  Identities=12%  Similarity=0.180  Sum_probs=69.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccc------cccccc-cccccChHHHHHhhccccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSK------LEIHKE-FQELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~------~~~~~~-~~d~~~~~~~~~~~~~~d~vv   76 (104)
                      .+.++|+||||+||+|+++++.|+++ |++|++++|+.........      ...... ..|+.|.+.+.+++.++|+||
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~Vi   91 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTI   91 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEE
Confidence            35578999999999999999999998 5899999887543211000      001111 138889999999999999999


Q ss_pred             EcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           77 STVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+|+...               +..+.+++++|.+.+  +|||
T Consensus        92 HlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v  132 (386)
T PLN02427         92 NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLI  132 (386)
T ss_pred             EcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEE
Confidence            9998532               223567788887654  5653

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.62  E-value=4.9e-15  Score=94.39  Aligned_cols=94  Identities=21%  Similarity=0.406  Sum_probs=75.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccc-cc--cccccChHHHHHhhc--cccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIH-KE--FQELDEHEKIISILK--EVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~-~~--~~d~~~~~~~~~~~~--~~d~vv~~a~~~   82 (104)
                      ++|+|+|++||||++.+.+|+++|++|+++++-....  .....+. ..  ..|+.|.+.+.+.|.  .+|.|+|+||..
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~--~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~   78 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH--KIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASI   78 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC--HHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECcccc
Confidence            4799999999999999999999999999998754333  1222221 11  239999999999986  589999999985


Q ss_pred             C---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           83 Q---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        83 ~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .               +.++..|++++.+.+ |++||
T Consensus        79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~v  114 (329)
T COG1087          79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFI  114 (329)
T ss_pred             ccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEE
Confidence            4               467889999999998 88875

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.61  E-value=5.2e-15  Score=96.11  Aligned_cols=98  Identities=19%  Similarity=0.278  Sum_probs=72.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-------ccccc-cccccChHHHHHhhccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-------EIHKE-FQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-------~~~~~-~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      .++++||||+|++|++++++|+++|++|+++.|+....+.....       ..... ..|+.+++.+.++++++|+|||+
T Consensus         5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~   84 (322)
T PLN02986          5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT   84 (322)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence            46899999999999999999999999999888876542111100       01111 13888999999999999999999


Q ss_pred             ccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ--------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~--------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+...              +..+.++++++.+..+++|||
T Consensus        85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV  124 (322)
T PLN02986         85 ASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVI  124 (322)
T ss_pred             CCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEE
Confidence            98631              234568888887753377764

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.61  E-value=4.9e-15  Score=97.20  Aligned_cols=95  Identities=20%  Similarity=0.243  Sum_probs=67.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccc-ccccc-ChHHHHHhhccccEEEEcccCcC-
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKE-FQELD-EHEKIISILKEVGVVISTVAYPQ-   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~-~~~~~~~~~~~~d~vv~~a~~~~-   83 (104)
                      |+|+||||+||+|+++++.|+++ |++|++++|+............... ..|+. +.+.+.++++++|+|||+++... 
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~~~   81 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVKKCDVILPLVAIATP   81 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHcCCCEEEECcccCCh
Confidence            58999999999999999999986 6999999986543211101111111 13775 56677788889999999997532 


Q ss_pred             --------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                    +..+.++++++.+.+  ++||
T Consensus        82 ~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v  114 (347)
T PRK11908         82 ATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLV  114 (347)
T ss_pred             HHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEE
Confidence                          245678899988765  5553

>PLN02650 dihydroflavonol-4-reductase

Probab=99.60  E-value=6.7e-15  Score=96.66  Aligned_cols=99  Identities=15%  Similarity=0.226  Sum_probs=72.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----c---ccccc-ccccChHHHHHhhccccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----E---IHKEF-QELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~---~~~~~-~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      .+++|+||||+||+|+++++.|+++|++|+++.|+..........    .   ....+ .|+.+.+.+.++++++|+|||
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH   83 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFH   83 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEE
Confidence            346899999999999999999999999999998876443110000    0   11111 388888899999999999999


Q ss_pred             cccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQ--------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~--------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|+...              +..+.++++++.+.+.++|||
T Consensus        84 ~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v  124 (351)
T PLN02650         84 VATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIV  124 (351)
T ss_pred             eCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEE
Confidence            998532              235678889888764356654

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.60  E-value=1.4e-14  Score=93.86  Aligned_cols=96  Identities=19%  Similarity=0.313  Sum_probs=72.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      ++++|+|++|++|+++++.|+++|++|++++|+++...............|+.+.+++.++++++|+|||+++...    
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~~~~~   80 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAP   80 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCHHHHHHHHhCCCEEEEeceecccCCC
Confidence            3799999999999999999999999999999986543211111111112389999999999999999999997532    


Q ss_pred             ---------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ---------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ---------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                               +..+.++++++.+.+ ++++|
T Consensus        81 ~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v  109 (328)
T TIGR03466        81 DPEEMYAANVEGTRNLLRAALEAG-VERVV  109 (328)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence                     345578888888776 67654

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.59  E-value=1.7e-14  Score=96.22  Aligned_cols=98  Identities=28%  Similarity=0.411  Sum_probs=73.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc---c----ccccccc-cccccChHHHHHhhc----ccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT---S----KLEIHKE-FQELDEHEKIISILK----EVG   73 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~---~----~~~~~~~-~~d~~~~~~~~~~~~----~~d   73 (104)
                      ++++++|+||+|++|+++++.|+++|++|+++.|+.......   .    ....... ..|+.|++.+.++++    ++|
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D  138 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD  138 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence            457899999999999999999999999999999986543100   0    0011111 138999999999887    589


Q ss_pred             EEEEcccCcC----------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +||||++...          ...+.++++++.+.+ +++||
T Consensus       139 ~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V  178 (390)
T PLN02657        139 VVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVG-AKHFV  178 (390)
T ss_pred             EEEECCccCCCCCccchhhHHHHHHHHHHHHHHcC-CCEEE
Confidence            9999987531          345678999998887 78764

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.58  E-value=1.3e-14  Score=94.66  Aligned_cols=99  Identities=23%  Similarity=0.363  Sum_probs=72.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccc-ccc--ccccc-cccccChHHHHHhhccccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRT-SKL--EIHKE-FQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~-~~~--~~~~~-~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      ++.++++|+||+|++|+++++.|+++|  ++|++++|+....... ...  ..... ..|+.|++.+.++++++|+|||+
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~   81 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHA   81 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence            355789999999999999999999886  6888888875432110 000  01111 13899999999999999999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|...               +.++.++++++.+.+ +++||
T Consensus        82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV  121 (324)
T TIGR03589        82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVV  121 (324)
T ss_pred             cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            98642               235678889998876 66654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.57  E-value=1.3e-14  Score=96.13  Aligned_cols=100  Identities=14%  Similarity=0.209  Sum_probs=73.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----------cccccc-ccccChHHHHHhhcccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----------EIHKEF-QELDEHEKIISILKEVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----------~~~~~~-~d~~~~~~~~~~~~~~d   73 (104)
                      +++++|+||||+|++|+++++.|+++|++|.++.|+..........          .....+ .|+.|.+.+.+++.++|
T Consensus        51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d  130 (367)
T PLN02686         51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCA  130 (367)
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhcc
Confidence            5567999999999999999999999999999888765332111000          001111 38999999999999999


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .|||+++...               ...+.++++++.+..+++|||
T Consensus       131 ~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V  176 (367)
T PLN02686        131 GVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCV  176 (367)
T ss_pred             EEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEE
Confidence            9999987521               345678999988752378764

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.57  E-value=3.1e-14  Score=93.30  Aligned_cols=91  Identities=20%  Similarity=0.303  Sum_probs=67.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--cccccc---------ccccc-cccccChHHHHHhhcc--cc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRTSKL---------EIHKE-FQELDEHEKIISILKE--VG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~~~~---------~~~~~-~~d~~~~~~~~~~~~~--~d   73 (104)
                      ++++||||+||+|+++++.|++.|++|++++|++...  ......         ..... ..|+.|.+.+.+++.+  +|
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d   80 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT   80 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence            4899999999999999999999999999999876421  000000         00111 1389999999999875  69


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      +|||+|+...               ..++.+++++|.+.+
T Consensus        81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~  120 (343)
T TIGR01472        81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG  120 (343)
T ss_pred             EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999999632               225678999998765

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.55  E-value=6.3e-14  Score=90.27  Aligned_cols=93  Identities=25%  Similarity=0.390  Sum_probs=70.2

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccc-ccccccChHHHHHhhccc-cEEEEcccCcC---
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK-EFQELDEHEKIISILKEV-GVVISTVAYPQ---   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~-d~vv~~a~~~~---   83 (104)
                      +|+|||++||+|+++++.|+++|++|++++|.........  .... ...|+.+.+.+.+.+..+ |+|||+++...   
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~~~   79 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL--SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPD   79 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc--cccceeeecccchHHHHHHHhcCCCEEEEccccCchhh
Confidence            4999999999999999999999999999999876552221  1111 112666777777778777 99999998753   


Q ss_pred             -------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                   +..+.++++++.+.+ ++++|
T Consensus        80 ~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v  112 (314)
T COG0451          80 SNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFV  112 (314)
T ss_pred             hhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence                         234668899998865 78764

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.55  E-value=8.1e-14  Score=94.27  Aligned_cols=99  Identities=17%  Similarity=0.233  Sum_probs=69.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc---c----------ccc--------cccccc-ccccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR---T----------SKL--------EIHKEF-QELDE   61 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~---~----------~~~--------~~~~~~-~d~~~   61 (104)
                      .++++|+||||+||+|+++++.|+++|++|+++++..... +.   .          ...        .....+ .|+.|
T Consensus        45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d  124 (442)
T PLN02572         45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD  124 (442)
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence            3567899999999999999999999999999987532110 00   0          000        001111 38999


Q ss_pred             hHHHHHhhc--cccEEEEcccCcC------------------hhhHHHHHHHHHHhCCcc-cCC
Q 046878           62 HEKIISILK--EVGVVISTVAYPQ------------------LLDQLKIVDAIKVAGNIK-VFV  104 (104)
Q Consensus        62 ~~~~~~~~~--~~d~vv~~a~~~~------------------~~~~~~l~~~~~~~~~v~-~~i  104 (104)
                      .+.+.++++  ++|+|||+|+...                  +.++.++++++.+.+ ++ +||
T Consensus       125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V  187 (442)
T PLN02572        125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLV  187 (442)
T ss_pred             HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEE
Confidence            999999987  4899999996521                  335678899998876 64 553

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.55  E-value=4e-14  Score=99.66  Aligned_cols=96  Identities=19%  Similarity=0.243  Sum_probs=68.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccc-cccccChHH-HHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKE-FQELDEHEK-IISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~-~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++|+||||+||+|+++++.|+++ |++|++++|.+.............. ..|+.|.+. +.++++++|+|||+|+...
T Consensus       315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~~~D~ViHlAa~~~  394 (660)
T PRK08125        315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIKKCDVVLPLVAIAT  394 (660)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhcCCCEEEECccccC
Confidence            468999999999999999999985 6999999987643211111111111 137877555 5677889999999998543


Q ss_pred             ---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                     +..+.+++++|.+.+  ++||
T Consensus       395 ~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V  428 (660)
T PRK08125        395 PIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRII  428 (660)
T ss_pred             chhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEE
Confidence                           345678899998875  5553

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.55  E-value=2.9e-14  Score=98.11  Aligned_cols=98  Identities=21%  Similarity=0.291  Sum_probs=74.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-------------ccccc-cccccChHHHHHhhc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-------------EIHKE-FQELDEHEKIISILK   70 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-------------~~~~~-~~d~~~~~~~~~~~~   70 (104)
                      +.++++|+||+|++|++++++|++.|++|+++.|+..+...... .             ..... ..|+.+.+.+.+++.
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg  158 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG  158 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence            45689999999999999999999999999999998655421100 0             00111 138999999999999


Q ss_pred             cccEEEEcccCcC-------------hhhHHHHHHHHHHhCCcccCC
Q 046878           71 EVGVVISTVAYPQ-------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        71 ~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ++|+|||++|...             ..++.++++++.+.+ ++|||
T Consensus       159 giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV  204 (576)
T PLN03209        159 NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFI  204 (576)
T ss_pred             CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence            9999999998642             235678899998886 77765

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.55  E-value=4.9e-14  Score=87.53  Aligned_cols=94  Identities=29%  Similarity=0.538  Sum_probs=71.4

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHhhccc--cEEEEcccCcC---
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISILKEV--GVVISTVAYPQ---   83 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~--d~vv~~a~~~~---   83 (104)
                      |+|+||+|++|+++++.|+++|+.|+.+.|+......... ........|+.+.+.+.++++..  |+|||+++...   
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   80 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSSNPE   80 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSSHHH
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccccCceEEEEeeccccccc
Confidence            7899999999999999999999999888888755421111 11111123888999999999866  99999999852   


Q ss_pred             ------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                  ...+.++++++.+.+ +++||
T Consensus        81 ~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i  112 (236)
T PF01370_consen   81 SFEDPEEIIEANVQGTRNLLEAAREAG-VKRFI  112 (236)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEE
T ss_pred             ccccccccccccccccccccccccccc-ccccc
Confidence                        456679999999887 66653

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.54  E-value=6.9e-14  Score=91.89  Aligned_cols=99  Identities=20%  Similarity=0.396  Sum_probs=71.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---ccc-ccccccChHHHHHhhcc--ccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHK-EFQELDEHEKIISILKE--VGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~-~~~d~~~~~~~~~~~~~--~d~vv~~   78 (104)
                      ++++++|+||+|++|+++++.|+++|++|++++|+....... ....   ... ...|+.+.+++.+++++  +|+|||+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            457899999999999999999999999999999876543111 0000   111 12388899999888875  5999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ++...               +..+.++++++.+.+.++++|
T Consensus        83 A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv  123 (349)
T TIGR02622        83 AAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVV  123 (349)
T ss_pred             CcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEE
Confidence            98532               335678888887654345553

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.54  E-value=6.2e-14  Score=90.54  Aligned_cols=79  Identities=22%  Similarity=0.295  Sum_probs=63.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC--
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ--   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~--   83 (104)
                      |+|+||||+||+|+++++.|++.| +|++++|....           ...|+.|.+.+.++++  ++|+|||+|+...  
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~~-----------~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~~~   68 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHSTD-----------YCGDFSNPEGVAETVRKIRPDVIVNAAAHTAVD   68 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccccc-----------ccCCCCCHHHHHHHHHhcCCCEEEECCccCCcc
Confidence            479999999999999999999988 78888776421           1137889999998887  4899999998753  


Q ss_pred             -------------hhhHHHHHHHHHHhC
Q 046878           84 -------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~   98 (104)
                                   ...+.+++++|.+.+
T Consensus        69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~g   96 (299)
T PRK09987         69 KAESEPEFAQLLNATSVEAIAKAANEVG   96 (299)
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence                         234668999998876

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.54  E-value=3.7e-14  Score=96.65  Aligned_cols=99  Identities=17%  Similarity=0.330  Sum_probs=79.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccc-----cc---ccccccccccccChHHHHHhhcc--cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSR-----TS---KLEIHKEFQELDEHEKIISILKE--VG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~-----~~---~~~~~~~~~d~~~~~~~~~~~~~--~d   73 (104)
                      .+.++|+||||+|.+|+++++++++.+. ++++++|++.+...     ..   .......+.|+.|.+.+.+++.+  +|
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd  327 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD  327 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence            3568999999999999999999998775 68888888755421     11   12222334499999999999998  99


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|||+|+..+               +.++++++++|.+.+ |++||
T Consensus       328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V  372 (588)
T COG1086         328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFV  372 (588)
T ss_pred             eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEE
Confidence            9999999865               457889999999998 88875

>PLN02240 UDP-glucose 4-epimerase

Probab=99.54  E-value=1.4e-13  Score=90.28  Aligned_cols=99  Identities=18%  Similarity=0.285  Sum_probs=70.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc----ccc-----ccccc-ccccccChHHHHHhhc--cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR----TSK-----LEIHK-EFQELDEHEKIISILK--EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~----~~~-----~~~~~-~~~d~~~~~~~~~~~~--~~   72 (104)
                      |++++++|+||+|++|+++++.|+++|++|++++|.......    ...     ..... ...|+.+++.+.++++  ++
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~~   82 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTRF   82 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCCC
Confidence            455799999999999999999999999999999875422100    000     00011 1138889999988876  68


Q ss_pred             cEEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           73 GVVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        73 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+|||+++...               +..+.++++++.+.+ +++||
T Consensus        83 d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v  128 (352)
T PLN02240         83 DAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLV  128 (352)
T ss_pred             CEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            99999998632               245668888888776 66654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.54  E-value=8.5e-14  Score=83.28  Aligned_cols=92  Identities=21%  Similarity=0.266  Sum_probs=73.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc-ccccChHHHHHhhccccEEEEcccCcC---
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIISILKEVGVVISTVAYPQ---   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~~~---   83 (104)
                      |||.|+||+|..|+.++++...+||+|+++.|++.+....   +..... .|+.|++++.+.+.+.|+||.+.+...   
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---QGVTILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---ccceeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            5899999999999999999999999999999999877221   212112 389999999999999999999988762   


Q ss_pred             ----hhhHHHHHHHHHHhCCcccC
Q 046878           84 ----LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        84 ----~~~~~~l~~~~~~~~~v~~~  103 (104)
                          ......+++.++.++ +.|+
T Consensus        78 ~~~~~k~~~~li~~l~~ag-v~Rl  100 (211)
T COG2910          78 DELHSKSIEALIEALKGAG-VPRL  100 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcC-CeeE
Confidence                223456777777766 6775

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.53  E-value=7.1e-14  Score=91.93  Aligned_cols=99  Identities=19%  Similarity=0.242  Sum_probs=70.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc---cccccc-cccccChHHHHHhhccccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK---LEIHKE-FQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~---~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      ..++++|||++|++|++++++|+++|++|++++|+....... ..   ...... ..|+.+.+.+.+++.++|+|||+|+
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A~   88 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVAA   88 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECCc
Confidence            456999999999999999999999999999988875432110 00   011111 1388999999999999999999998


Q ss_pred             CcC----------------------hhhHHHHHHHHHHhCCcccCC
Q 046878           81 YPQ----------------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        81 ~~~----------------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ...                      +..+.++++++.+.+.+++||
T Consensus        89 ~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v  134 (353)
T PLN02896         89 SMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVV  134 (353)
T ss_pred             cccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEE
Confidence            632                      023557788887654356654

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.53  E-value=8.9e-14  Score=90.42  Aligned_cols=98  Identities=15%  Similarity=0.221  Sum_probs=70.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-------ccccc-cccccChHHHHHhhccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-------EIHKE-FQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-------~~~~~-~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      .++++|+||+|++|+++++.|+++|++|.++.|++.........       ..... ..|+.+.+.+.++++++|+|||+
T Consensus         5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~   84 (325)
T PLN02989          5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT   84 (325)
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence            46899999999999999999999999998888876543111000       00111 13889999999999999999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+...               +..+.++++++.+...+++||
T Consensus        85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv  125 (325)
T PLN02989         85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVI  125 (325)
T ss_pred             CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEE
Confidence            98632               234567888877642245553

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.53  E-value=1.7e-14  Score=92.33  Aligned_cols=94  Identities=20%  Similarity=0.388  Sum_probs=65.5

Q ss_pred             EEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc----------cc--ccccccccccChHHHHHhhc--cccE
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS----------KL--EIHKEFQELDEHEKIISILK--EVGV   74 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~----------~~--~~~~~~~d~~~~~~~~~~~~--~~d~   74 (104)
                      |+||||+|.+|+.++++|++.+. .++++++++...-...          ..  .....+.|+.|.+.+..+++  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            78999999999999999999874 7999999865541100          01  11122449999999999998  8999


Q ss_pred             EEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           75 VISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        75 vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |||+|+..+               +.++.++++++.+.+ +++||
T Consensus        81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v  124 (293)
T PF02719_consen   81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFV  124 (293)
T ss_dssp             EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEE
T ss_pred             EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            999999876               457889999999997 99875

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.52  E-value=2e-13  Score=89.40  Aligned_cols=94  Identities=20%  Similarity=0.296  Sum_probs=68.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--ccccc--------ccccc-cccccChHHHHHhhcc--
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKL--------EIHKE-FQELDEHEKIISILKE--   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~--------~~~~~-~~d~~~~~~~~~~~~~--   71 (104)
                      .++++++||||+|++|+++++.|+++|++|++++|++....  .....        ..... ..|+.|.+.+.+++..  
T Consensus         4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   83 (340)
T PLN02653          4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK   83 (340)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence            35578999999999999999999999999999988754210  01100        00111 1388999999888875  


Q ss_pred             ccEEEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878           72 VGVVISTVAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        72 ~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      +|+|||+|+...               ..++.++++++.+.+
T Consensus        84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~  125 (340)
T PLN02653         84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG  125 (340)
T ss_pred             CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc
Confidence            699999999742               234678888888765

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.51  E-value=4.5e-14  Score=95.35  Aligned_cols=91  Identities=23%  Similarity=0.387  Sum_probs=60.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCcC--
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ--   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~--   83 (104)
                      .++|+||||+||+|++|++.|+++|++|++++|........ ........+ ++.+.+.+...+.++|+|||+|+...  
T Consensus       120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~-~~~~~Di~~~~~~~~D~ViHlAa~~~~~  198 (436)
T PLN02166        120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRF-ELIRHDVVEPILLEVDQIYHLACPASPV  198 (436)
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCce-EEEECccccccccCCCEEEECceeccch
Confidence            46899999999999999999999999999998753221000 000000000 11122222334568999999998532  


Q ss_pred             -------------hhhHHHHHHHHHHhC
Q 046878           84 -------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~   98 (104)
                                   +..+.+++++|++.+
T Consensus       199 ~~~~~p~~~~~~Nv~gT~nLleaa~~~g  226 (436)
T PLN02166        199 HYKYNPVKTIKTNVMGTLNMLGLAKRVG  226 (436)
T ss_pred             hhccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence                         345689999999886

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.50  E-value=6.3e-14  Score=94.80  Aligned_cols=95  Identities=21%  Similarity=0.393  Sum_probs=61.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-c-cccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-T-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +.++|+||||+||+|+++++.|+++|++|++++|....... . .... .... ++.+.+.+...+.++|+|||+|+...
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~-~~~~-~~i~~D~~~~~l~~~D~ViHlAa~~~  195 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS-NPNF-ELIRHDVVEPILLEVDQIYHLACPAS  195 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc-CCce-EEEECCccChhhcCCCEEEEeeeecc
Confidence            34789999999999999999999999999998865322100 0 0000 0000 11111222334568999999998532


Q ss_pred             ---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                     +..+.+++++|++.+ + +||
T Consensus       196 ~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V  229 (442)
T PLN02206        196 PVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFL  229 (442)
T ss_pred             hhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEE
Confidence                           345679999998886 4 543

>PLN02583 cinnamoyl-CoA reductase

Probab=99.50  E-value=2.4e-13  Score=87.69  Aligned_cols=99  Identities=19%  Similarity=0.276  Sum_probs=71.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc---cccc----cccccc-ccccChHHHHHhhccccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR---TSKL----EIHKEF-QELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~---~~~~----~~~~~~-~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +.++++||||+|++|+++++.|+++|++|+++.|+......   ....    .....+ .|+.|.+.+.+++.++|.|+|
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~   84 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC   84 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            44689999999999999999999999999999886432110   0000    011111 389999999999999999999


Q ss_pred             cccCcC-------------hhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQ-------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~-------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +++...             +..+.++++++.+..+++|+|
T Consensus        85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV  124 (297)
T PLN02583         85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVV  124 (297)
T ss_pred             eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Confidence            875432             346778999888753366654

>PRK05865 hypothetical protein; Provisional

Probab=99.50  E-value=2.1e-13  Score=97.71  Aligned_cols=93  Identities=18%  Similarity=0.255  Sum_probs=72.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      |+++|+||+|++|+++++.|+++|++|++++|+.... .......  ...|+.|.+.+.++++++|+|||+++...    
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~-~~~~v~~--v~gDL~D~~~l~~al~~vD~VVHlAa~~~~~~~   77 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS-WPSSADF--IAADIRDATAVESAMTGADVVAHCAWVRGRNDH   77 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh-cccCceE--EEeeCCCHHHHHHHHhCCCEEEECCCcccchHH
Confidence            4799999999999999999999999999999875322 1111111  11389999999999999999999998643    


Q ss_pred             --hhhHHHHHHHHHHhCCcccCC
Q 046878           84 --LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 --~~~~~~l~~~~~~~~~v~~~i  104 (104)
                        +..+.++++++.+.+ +++||
T Consensus        78 vNv~GT~nLLeAa~~~g-vkr~V   99 (854)
T PRK05865         78 INIDGTANVLKAMAETG-TGRIV   99 (854)
T ss_pred             HHHHHHHHHHHHHHHcC-CCeEE
Confidence              456778999998886 77764

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.49  E-value=4.5e-13  Score=87.44  Aligned_cols=96  Identities=17%  Similarity=0.356  Sum_probs=68.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccc----c-cccc-cccccChHHHHHhhc--cccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKL----E-IHKE-FQELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~----~-~~~~-~~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      |+++|+||+|++|+++++.|+++|++|++++|....... ....    . .... ..|+.|++.+.+++.  ++|+|||+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~   80 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF   80 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence            479999999999999999999999999988765322210 0000    0 0111 138888888888886  58999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ++...               +..+.++++++.+.+ +++||
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v  120 (338)
T PRK10675         81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLI  120 (338)
T ss_pred             CccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            98643               224568888888776 77764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.49  E-value=4.1e-13  Score=88.22  Aligned_cols=89  Identities=17%  Similarity=0.332  Sum_probs=61.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEE-EEcCCCCcc--ccccc---ccccc-cccccChHHHHHhhcc--ccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFV-YARPVTENS--RTSKL---EIHKE-FQELDEHEKIISILKE--VGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~-~~r~~~~~~--~~~~~---~~~~~-~~d~~~~~~~~~~~~~--~d~vv~~   78 (104)
                      ++++||||+|++|+++++.|+++|+.+++ +++......  .....   ..... ..|+.|.+++.+++++  +|+|||+
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih~   81 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMHL   81 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEEC
Confidence            58999999999999999999999987554 444322110  00010   00111 1388999999998874  8999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHH
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKV   96 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~   96 (104)
                      +|...               +..+.++++++.+
T Consensus        82 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~  114 (355)
T PRK10217         82 AAESHVDRSIDGPAAFIETNIVGTYTLLEAARA  114 (355)
T ss_pred             CcccCcchhhhChHHHHHHhhHHHHHHHHHHHH
Confidence            98643               3456788888875

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.47  E-value=5.8e-13  Score=93.94  Aligned_cols=99  Identities=15%  Similarity=0.237  Sum_probs=68.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCC--cccccc---cccccc-cccccChHHHHHhh--ccccEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTE--NSRTSK---LEIHKE-FQELDEHEKIISIL--KEVGVV   75 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~--~~~~~~---~~~~~~-~~d~~~~~~~~~~~--~~~d~v   75 (104)
                      +.++|+||||+||+|+++++.|+++  +++|++++|....  ......   ...... ..|+.|.+.+...+  .++|+|
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V   84 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI   84 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence            4579999999999999999999987  5788888875311  100000   001111 13888888777665  579999


Q ss_pred             EEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           76 ISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        76 v~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ||+|+...               +..+.++++++++.++++|||
T Consensus        85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I  128 (668)
T PLN02260         85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFI  128 (668)
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Confidence            99999753               234678899998875577764

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.47  E-value=6e-13  Score=83.94  Aligned_cols=98  Identities=18%  Similarity=0.367  Sum_probs=70.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccccccc-ccccC-hHHHHHhh-ccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEF-QELDE-HEKIISIL-KEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~-~d~~~-~~~~~~~~-~~~d~vv~~a~~   81 (104)
                      .+++++|+||+|++|+++++.|+++|++|+++.|++...... ........+ .|+.+ .+.+.+.+ .++|+||+++|.
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~   95 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF   95 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence            457999999999999999999999999999999886543111 000011111 27776 46777777 689999999886


Q ss_pred             cC-----------hhhHHHHHHHHHHhCCcccCC
Q 046878           82 PQ-----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        82 ~~-----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ..           .....++++++.+.+ ++|+|
T Consensus        96 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV  128 (251)
T PLN00141         96 RRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFI  128 (251)
T ss_pred             CcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEE
Confidence            42           124678899988776 67764

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.46  E-value=5.4e-13  Score=87.62  Aligned_cols=98  Identities=22%  Similarity=0.370  Sum_probs=75.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccc-----ccccccc-ccccChHHHHHhhccccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSK-----LEIHKEF-QELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~-----~~~~~~~-~d~~~~~~~~~~~~~~d~vv   76 (104)
                      +++.+++||||+||+|+++++.|++++  .++.+++..+........     ....+.. .|+.+...+.+++.++ .|+
T Consensus         2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vv   80 (361)
T KOG1430|consen    2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVV   80 (361)
T ss_pred             CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEE
Confidence            356789999999999999999999988  789999988753211111     1112222 3888888999999999 788


Q ss_pred             EcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           77 STVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+++...               +.++.+++++|.+.+ ++++|
T Consensus        81 h~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lI  122 (361)
T KOG1430|consen   81 HCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLI  122 (361)
T ss_pred             EeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEE
Confidence            8877643               678899999999998 88875

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.46  E-value=8.4e-13  Score=83.81  Aligned_cols=75  Identities=11%  Similarity=0.220  Sum_probs=57.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~~   78 (104)
                      ++++++|+||+|++|+++++.|+++|++|++++|++............  ..|+.|++++.++++       .+|++||+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPGVELL--ELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCCCeeE--EeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            346899999999999999999999999999999986554222111111  138889888888775       36999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      +|..
T Consensus        81 ag~~   84 (270)
T PRK06179         81 AGVG   84 (270)
T ss_pred             CCCC
Confidence            9974

>PRK12320 hypothetical protein; Provisional

Probab=99.46  E-value=6e-13  Score=93.75  Aligned_cols=88  Identities=17%  Similarity=0.256  Sum_probs=66.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      |+|+||||+||+|+++++.|++.|++|++++|.+.... ....+..  ..|+.++. +.+++.++|+|||+++...    
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~-~~~ve~v--~~Dl~d~~-l~~al~~~D~VIHLAa~~~~~~~   76 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL-DPRVDYV--CASLRNPV-LQELAGEADAVIHLAPVDTSAPG   76 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc-cCCceEE--EccCCCHH-HHHHhcCCCEEEEcCccCccchh
Confidence            37999999999999999999999999999998754321 1111111  13777764 7778889999999998642    


Q ss_pred             ---hhhHHHHHHHHHHhCCc
Q 046878           84 ---LLDQLKIVDAIKVAGNI  100 (104)
Q Consensus        84 ---~~~~~~l~~~~~~~~~v  100 (104)
                         ...+.+++++|.+.+ +
T Consensus        77 ~vNv~Gt~nLleAA~~~G-v   95 (699)
T PRK12320         77 GVGITGLAHVANAAARAG-A   95 (699)
T ss_pred             hHHHHHHHHHHHHHHHcC-C
Confidence               345778999998887 5

>PLN02778 3,5-epimerase/4-reductase

Probab=99.45  E-value=9.3e-13  Score=85.15  Aligned_cols=77  Identities=18%  Similarity=0.321  Sum_probs=57.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC--
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ--   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~--   83 (104)
                      ++|+||||+||+|+++++.|+++|++|+...+                  ++.+.+.+...+.  ++|+|||+|+...  
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~------------------~~~~~~~v~~~l~~~~~D~ViH~Aa~~~~~   71 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG------------------RLENRASLEADIDAVKPTHVFNAAGVTGRP   71 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEecC------------------ccCCHHHHHHHHHhcCCCEEEECCcccCCC
Confidence            68999999999999999999999998864321                  1223344444444  6899999998642  


Q ss_pred             ----------------hhhHHHHHHHHHHhCCcccC
Q 046878           84 ----------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        84 ----------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                                      ...+.+++++|.+.+ ++++
T Consensus        72 ~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v  106 (298)
T PLN02778         72 NVDWCESHKVETIRANVVGTLTLADVCRERG-LVLT  106 (298)
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEE
Confidence                            235678999999886 6654

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.43  E-value=7.4e-13  Score=83.68  Aligned_cols=80  Identities=25%  Similarity=0.368  Sum_probs=58.1

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-cccEEEEcccCcC-----
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-EVGVVISTVAYPQ-----   83 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vv~~a~~~~-----   83 (104)
                      |+|+|+||+||++|+..|...||+|++++|++.+....   ....    ....+.+.+... ++|+|||.||.+.     
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~~----v~~~~~~~~~~~~~~DavINLAG~~I~~rrW   73 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN---LHPN----VTLWEGLADALTLGIDAVINLAGEPIAERRW   73 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCcc----ccccchhhhcccCCCCEEEECCCCccccccC
Confidence            68999999999999999999999999999998765211   1111    112233344444 7999999999865     


Q ss_pred             ------------hhhHHHHHHHHHH
Q 046878           84 ------------LLDQLKIVDAIKV   96 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~   96 (104)
                                  .+.++.+.++...
T Consensus        74 t~~~K~~i~~SRi~~T~~L~e~I~~   98 (297)
T COG1090          74 TEKQKEEIRQSRINTTEKLVELIAA   98 (297)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHh
Confidence                        4566777776663

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.43  E-value=1.2e-12  Score=83.66  Aligned_cols=75  Identities=25%  Similarity=0.437  Sum_probs=61.6

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccc--cEEEEcccCcC---
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEV--GVVISTVAYPQ---   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--d~vv~~a~~~~---   83 (104)
                      +|+|+||+|++|++++++|+++|++|+++.|+.               .|+.+++.+.+++.+.  |+|||+++...   
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~---------------~d~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~   65 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ---------------LDLTDPEALERLLRAIRPDAVVNTAAYTDVDG   65 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc---------------cCCCCHHHHHHHHHhCCCCEEEECCccccccc
Confidence            589999999999999999999999999988751               3677888898888765  99999998643   


Q ss_pred             ------------hhhHHHHHHHHHHhC
Q 046878           84 ------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~~~   98 (104)
                                  ...+.++++++.+.+
T Consensus        66 ~~~~~~~~~~~n~~~~~~l~~~~~~~~   92 (287)
T TIGR01214        66 AESDPEKAFAVNALAPQNLARAAARHG   92 (287)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHHcC
Confidence                        224667888887665

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.43  E-value=9.7e-13  Score=82.99  Aligned_cols=82  Identities=9%  Similarity=0.135  Sum_probs=59.5

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---c-ccccc-ccccChHHHHHhhc----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---E-IHKEF-QELDEHEKIISILK----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~-~~~~~-~d~~~~~~~~~~~~----   70 (104)
                      |.+.+++++++|+|++|++|+++++.|+++|++|.+++|+++..... ...   . ....+ .|+.+++++.+++.    
T Consensus         1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (262)
T PRK13394          1 MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE   80 (262)
T ss_pred             CcccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH
Confidence            44456678999999999999999999999999999999987443111 000   0 01111 38888888777654    


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|+|||++|..
T Consensus        81 ~~~~~d~vi~~ag~~   95 (262)
T PRK13394         81 RFGSVDILVSNAGIQ   95 (262)
T ss_pred             HcCCCCEEEECCccC
Confidence               489999999874

>PRK06182 short chain dehydrogenase; Validated

Probab=99.43  E-value=9.7e-13  Score=83.75  Aligned_cols=77  Identities=18%  Similarity=0.309  Sum_probs=57.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~~   78 (104)
                      ++++++|+|++|++|+++++.|++.|++|++++|+.++.+............|+.|++++.++++       ++|++||+
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~   81 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN   81 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence            45789999999999999999999999999999998654421111111111138888888877765       68999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      +|..
T Consensus        82 ag~~   85 (273)
T PRK06182         82 AGYG   85 (273)
T ss_pred             CCcC
Confidence            9974

>PLN00016 RNA-binding protein; Provisional

Probab=99.42  E-value=8.7e-13  Score=87.63  Aligned_cols=93  Identities=26%  Similarity=0.412  Sum_probs=66.6

Q ss_pred             CCeEEEE----ccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc--------ccc--ccc-ccccccChHHHHHhh--
Q 046878            7 KPKILIF----GGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS--------KLE--IHK-EFQELDEHEKIISIL--   69 (104)
Q Consensus         7 ~~~i~i~----Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~--------~~~--~~~-~~~d~~~~~~~~~~~--   69 (104)
                      +++|+|+    ||+|++|+++++.|+++|++|++++|+........        ...  ... ...|+.|   +.+.+  
T Consensus        52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~~~  128 (378)
T PLN00016         52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKVAG  128 (378)
T ss_pred             cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhhcc
Confidence            3689999    99999999999999999999999999865421100        000  011 0114433   44444  


Q ss_pred             ccccEEEEcccCcChhhHHHHHHHHHHhCCcccCC
Q 046878           70 KEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        70 ~~~d~vv~~a~~~~~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .++|+|||+++.. ...+.++++++.+.+ +++||
T Consensus       129 ~~~d~Vi~~~~~~-~~~~~~ll~aa~~~g-vkr~V  161 (378)
T PLN00016        129 AGFDVVYDNNGKD-LDEVEPVADWAKSPG-LKQFL  161 (378)
T ss_pred             CCccEEEeCCCCC-HHHHHHHHHHHHHcC-CCEEE
Confidence            4789999998753 567889999999887 88875

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.40  E-value=2.3e-12  Score=82.35  Aligned_cols=84  Identities=25%  Similarity=0.381  Sum_probs=61.3

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC------
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ------   83 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~------   83 (104)
                      |+|+||+|++|+++++.|++.|++|++++|++........ .   ...++.. +.+.+.+.++|+|||+++...      
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~---~~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~~~~~~   75 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-E---GYKPWAP-LAESEALEGADAVINLAGEPIADKRWT   75 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-e---eeecccc-cchhhhcCCCCEEEECCCCCcccccCC
Confidence            6899999999999999999999999999998765421110 1   1122222 344566789999999998632      


Q ss_pred             -----------hhhHHHHHHHHHHhC
Q 046878           84 -----------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -----------~~~~~~l~~~~~~~~   98 (104)
                                 +..+.++++++.+.+
T Consensus        76 ~~~~~~~~~~n~~~~~~l~~a~~~~~  101 (292)
T TIGR01777        76 EERKQEIRDSRIDTTRALVEAIAAAE  101 (292)
T ss_pred             HHHHHHHHhcccHHHHHHHHHHHhcC
Confidence                       233678889998876

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.39  E-value=1.5e-12  Score=91.39  Aligned_cols=95  Identities=16%  Similarity=0.244  Sum_probs=65.2

Q ss_pred             CeEEEEccCChhhHHHHHHHH--hCCCeEEEEEcCCCCccccccc-----ccccc-cccccC------hHHHHHhhcccc
Q 046878            8 PKILIFGGTGYLGKYMVKASV--SSGHNTFVYARPVTENSRTSKL-----EIHKE-FQELDE------HEKIISILKEVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~--~~~~~v~~~~r~~~~~~~~~~~-----~~~~~-~~d~~~------~~~~~~~~~~~d   73 (104)
                      |+|+||||+|++|+++++.|+  ..+++|++++|+..........     ..... ..|+.+      .+.+.++ .++|
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D   79 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID   79 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence            379999999999999999999  5789999999964322100000     00111 126655      2345554 8999


Q ss_pred             EEEEcccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|||+++...            +.++.++++++.+.+ +++||
T Consensus        80 ~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v  121 (657)
T PRK07201         80 HVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFH  121 (657)
T ss_pred             EEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEE
Confidence            9999998643            456788999998876 66654

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.39  E-value=1.8e-12  Score=83.45  Aligned_cols=79  Identities=20%  Similarity=0.275  Sum_probs=61.3

Q ss_pred             EEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC-----
Q 046878           11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ-----   83 (104)
Q Consensus        11 ~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~-----   83 (104)
                      +||||+||+|+++++.|++.|+.++++.++.              -.|+.+.+++.+.+.  ++|+|||+|+...     
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~--------------~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~~~   66 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK--------------ELDLTRQADVEAFFAKEKPTYVILAAAKVGGIHAN   66 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc--------------cCCCCCHHHHHHHHhccCCCEEEEeeeeecccchh
Confidence            5899999999999999999998877654332              136788888888876  4799999997531     


Q ss_pred             -----------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                 ...+.++++++.+.+ +++||
T Consensus        67 ~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i   97 (306)
T PLN02725         67 MTYPADFIRENLQIQTNVIDAAYRHG-VKKLL   97 (306)
T ss_pred             hhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEE
Confidence                       235678999999886 77764

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.37  E-value=2.3e-12  Score=82.96  Aligned_cols=76  Identities=28%  Similarity=0.449  Sum_probs=56.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc--ccEEEEcccCcC--
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE--VGVVISTVAYPQ--   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vv~~a~~~~--   83 (104)
                      |||+|+|++|++|+++.+.|.+.|+++..++|..               .|+.|.+.+.+.+..  +|+||||++...  
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~---------------~dl~d~~~~~~~~~~~~pd~Vin~aa~~~~~   65 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRSD---------------LDLTDPEAVAKLLEAFKPDVVINCAAYTNVD   65 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC---------------S-TTSHHHHHHHHHHH--SEEEE------HH
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh---------------cCCCCHHHHHHHHHHhCCCeEeccceeecHH
Confidence            5899999999999999999999888988886662               257788888888764  799999999865  


Q ss_pred             -------------hhhHHHHHHHHHHhC
Q 046878           84 -------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~   98 (104)
                                   ...+.+++++|.+.+
T Consensus        66 ~ce~~p~~a~~iN~~~~~~la~~~~~~~   93 (286)
T PF04321_consen   66 ACEKNPEEAYAINVDATKNLAEACKERG   93 (286)
T ss_dssp             HHHHSHHHHHHHHTHHHHHHHHHHHHCT
T ss_pred             hhhhChhhhHHHhhHHHHHHHHHHHHcC
Confidence                         345568888888776

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.37  E-value=3.9e-12  Score=80.02  Aligned_cols=78  Identities=12%  Similarity=0.125  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----cccc-ccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      |+.++++|+|++|++|++++++|+++|++|.+++|+++..+.... .    .... ...|+.+++++.++++       +
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            455789999999999999999999999999999998755421110 0    0011 1138888888877764       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||+++..
T Consensus        82 ~d~vi~~a~~~   92 (258)
T PRK12429         82 VDILVNNAGIQ   92 (258)
T ss_pred             CCEEEECCCCC
Confidence            79999999864

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.37  E-value=4.3e-12  Score=81.07  Aligned_cols=76  Identities=22%  Similarity=0.302  Sum_probs=55.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--------cccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--------EVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--------~~d~vv~~   78 (104)
                      +++++|+||+|++|+++++.|.+.|++|++++|+++..+............|+.|++++.++++        .+|++||+
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~   83 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNN   83 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEEC
Confidence            3589999999999999999999999999999998755422111111111138888877766553        46999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      +|..
T Consensus        84 Ag~~   87 (277)
T PRK05993         84 GAYG   87 (277)
T ss_pred             CCcC
Confidence            9864

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.37  E-value=7.6e-12  Score=79.76  Aligned_cols=95  Identities=22%  Similarity=0.403  Sum_probs=75.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccc-------cccChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ-------ELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~-------d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      .....|+|||||+|+.++++|.+.|.++.+-.|.++..  ........++.       |+.|++++.++++...+|||+.
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~--~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI  138 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYD--PRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI  138 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccc--hhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence            34578999999999999999999999999888876544  22222222221       8999999999999999999999


Q ss_pred             cCcC-----------hhhHHHHHHHHHHhCCcccCC
Q 046878           80 AYPQ-----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        80 ~~~~-----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |...           ....++++..|+++| |+|||
T Consensus       139 Grd~eTknf~f~Dvn~~~aerlAricke~G-VerfI  173 (391)
T KOG2865|consen  139 GRDYETKNFSFEDVNVHIAERLARICKEAG-VERFI  173 (391)
T ss_pred             ccccccCCcccccccchHHHHHHHHHHhhC-hhhee
Confidence            9743           345679999999998 99986

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.36  E-value=5.7e-12  Score=81.40  Aligned_cols=88  Identities=17%  Similarity=0.239  Sum_probs=59.9

Q ss_pred             EEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhh----ccccEEEEcccCcC-
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL----KEVGVVISTVAYPQ-   83 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~----~~~d~vv~~a~~~~-   83 (104)
                      |+||||+|++|+++++.|.++|+ +|.+++|+.... ............|+.+.+.+..+.    .++|+|||+|+... 
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~~~   79 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLADLVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACSDT   79 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhheeeeccCcchhHHHHHHhhccCCCCEEEECccccCc
Confidence            68999999999999999999997 788877654322 111111111112566666555554    47999999998643 


Q ss_pred             ------------hhhHHHHHHHHHHhC
Q 046878           84 ------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~~~   98 (104)
                                  +..+.++++++.+.+
T Consensus        80 ~~~~~~~~~~~n~~~~~~ll~~~~~~~  106 (314)
T TIGR02197        80 TETDGEYMMENNYQYSKRLLDWCAEKG  106 (314)
T ss_pred             cccchHHHHHHHHHHHHHHHHHHHHhC
Confidence                        345678888888776

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.36  E-value=6.1e-12  Score=81.09  Aligned_cols=89  Identities=16%  Similarity=0.327  Sum_probs=62.0

Q ss_pred             eEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCC--ccccccc---cccccc-ccccChHHHHHhhcc--ccEEEEc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTE--NSRTSKL---EIHKEF-QELDEHEKIISILKE--VGVVIST   78 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~--~~~~~~~---~~~~~~-~d~~~~~~~~~~~~~--~d~vv~~   78 (104)
                      +|+||||+|++|++++++|++.+  ++|++++|....  .+.....   .....+ .|+.+++++.++++.  +|+|||+
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~   80 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF   80 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence            58999999999999999999887  678887763211  1000111   011111 389999999999887  8999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHh
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVA   97 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~   97 (104)
                      ++...               ...+.++++++.+.
T Consensus        81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~  114 (317)
T TIGR01181        81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY  114 (317)
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc
Confidence            98643               22356788888765

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.36  E-value=4.7e-12  Score=81.85  Aligned_cols=88  Identities=15%  Similarity=0.280  Sum_probs=55.9

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHH-HHhh-----ccccEEEEcccCcC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKI-ISIL-----KEVGVVISTVAYPQ   83 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~-----~~~d~vv~~a~~~~   83 (104)
                      |+||||+|++|+++++.|+++|++++++.|+............ -++.|..+.+.+ .+.+     .++|+|||+|+...
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~   80 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-LDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSS   80 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHhhhh-hhhhhhhhHHHHHHHHhcccccCCccEEEECceecC
Confidence            7999999999999999999999876666555432200000000 011233333333 3333     26899999997432


Q ss_pred             -------------hhhHHHHHHHHHHhC
Q 046878           84 -------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~   98 (104)
                                   ...+.+++++|.+.+
T Consensus        81 ~~~~~~~~~~~~n~~~t~~ll~~~~~~~  108 (308)
T PRK11150         81 TTEWDGKYMMDNNYQYSKELLHYCLERE  108 (308)
T ss_pred             CcCCChHHHHHHHHHHHHHHHHHHHHcC
Confidence                         345678999998876

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.35  E-value=9.3e-12  Score=80.52  Aligned_cols=95  Identities=24%  Similarity=0.438  Sum_probs=66.6

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccccccc---cccc-cccccChHHHHHhhc--cccEEEEcccC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRTSKLE---IHKE-FQELDEHEKIISILK--EVGVVISTVAY   81 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~~~~~---~~~~-~~d~~~~~~~~~~~~--~~d~vv~~a~~   81 (104)
                      +++|+||+|++|+++++.|+++|++|.+++|..... .......   .... ..|+.+++++.+++.  ++|+|||++|.
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~   80 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL   80 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence            589999999999999999999999998876543221 0111111   0111 138889999988886  68999999986


Q ss_pred             cC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           82 PQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        82 ~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ..               +..+.++++++.+.+ ++++|
T Consensus        81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v  117 (328)
T TIGR01179        81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFI  117 (328)
T ss_pred             cCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEE
Confidence            42               334568888887765 56553

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.34  E-value=1e-11  Score=79.29  Aligned_cols=77  Identities=16%  Similarity=0.315  Sum_probs=57.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--ccccc-cccccChHHHHHhhc-------cccEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKE-FQELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~-~~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      ++++++|+||+|++|+++++.|+++|++|++++|+++........  ..... ..|+.|++++.++++       ++|+|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            456899999999999999999999999999999986543211110  11111 138888888777664       47999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        83 v~~ag~~   89 (277)
T PRK06180         83 VNNAGYG   89 (277)
T ss_pred             EECCCcc
Confidence            9999974

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.34  E-value=8e-12  Score=77.92  Aligned_cols=78  Identities=8%  Similarity=0.232  Sum_probs=56.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc----cccc-cccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE----IHKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~----~~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      |++++++|+|++|++|+++++.|.++|++|.++.|++....... ...    .... ..|+.+++++.++++       .
T Consensus         3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (246)
T PRK05653          3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGA   82 (246)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45578999999999999999999999999999999875432110 000    0111 138888887777665       3


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus        83 id~vi~~ag~~   93 (246)
T PRK05653         83 LDILVNNAGIT   93 (246)
T ss_pred             CCEEEECCCcC
Confidence            59999999874

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.34  E-value=1.2e-11  Score=81.28  Aligned_cols=90  Identities=16%  Similarity=0.289  Sum_probs=61.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCC--Cccccccc---cccc-ccccccChHHHHHhhc--cccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVT--ENSRTSKL---EIHK-EFQELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~--~~~~~~~~---~~~~-~~~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      ++++||||+|++|+++++.|+++|+. +..+++...  ........   .... ...|+.|.+++.+++.  ++|+|||+
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL   80 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence            37999999999999999999999875 554554321  11001100   0011 1238999999999886  48999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHh
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVA   97 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~   97 (104)
                      |+...               +..+.+++++|.+.
T Consensus        81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~  114 (352)
T PRK10084         81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNY  114 (352)
T ss_pred             CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHh
Confidence            98642               34577888888753

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.33  E-value=2.8e-12  Score=81.33  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=60.7

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccc------cccccccChHHHHHhhc------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIH------KEFQELDEHEKIISILK------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~------~~~~d~~~~~~~~~~~~------   70 (104)
                      .+.+++++|||||+.||.++++.|.++|+++.++.|+.++..... ..+..      ....|+.+++++.....      
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            355679999999999999999999999999999999987653211 11111      11128888887777653      


Q ss_pred             -cccEEEEcccCcC
Q 046878           71 -EVGVVISTVAYPQ   83 (104)
Q Consensus        71 -~~d~vv~~a~~~~   83 (104)
                       .+|++||+||...
T Consensus        83 ~~IdvLVNNAG~g~   96 (265)
T COG0300          83 GPIDVLVNNAGFGT   96 (265)
T ss_pred             CcccEEEECCCcCC
Confidence             5899999999865

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=9.3e-12  Score=78.01  Aligned_cols=78  Identities=9%  Similarity=0.182  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---cccc-cccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      ++.++++|+||+|++|.++++.|+++|++|++++|++...... ....   .... ..|+.+++++.+++.       ++
T Consensus         3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   82 (251)
T PRK07231          3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV   82 (251)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4557999999999999999999999999999999987543211 1111   0111 138888888877764       46


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |+|||++|..
T Consensus        83 d~vi~~ag~~   92 (251)
T PRK07231         83 DILVNNAGTT   92 (251)
T ss_pred             CEEEECCCCC
Confidence            9999999873

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.33  E-value=3.6e-12  Score=81.02  Aligned_cols=95  Identities=26%  Similarity=0.418  Sum_probs=68.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc--ccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF--QELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~--~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+..+|+|+||.||+|++|+..|...|++|.+++......  .....++...  .++.-.+....++.++|.|+|+|++.
T Consensus        25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~--k~n~~~~~~~~~fel~~hdv~~pl~~evD~IyhLAapa  102 (350)
T KOG1429|consen   25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR--KENLEHWIGHPNFELIRHDVVEPLLKEVDQIYHLAAPA  102 (350)
T ss_pred             CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc--hhhcchhccCcceeEEEeechhHHHHHhhhhhhhccCC
Confidence            3457999999999999999999999999999998865433  1112222111  13333445566888999999999875


Q ss_pred             C---------------hhhHHHHHHHHHHhCCcccC
Q 046878           83 Q---------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        83 ~---------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                      .               ..++.+.+..|++.+  +||
T Consensus       103 sp~~y~~npvktIktN~igtln~lglakrv~--aR~  136 (350)
T KOG1429|consen  103 SPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARF  136 (350)
T ss_pred             CCcccccCccceeeecchhhHHHHHHHHHhC--ceE
Confidence            4               456778888888876  665

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.33  E-value=2.3e-11  Score=76.77  Aligned_cols=79  Identities=20%  Similarity=0.155  Sum_probs=59.0

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .++.++++|+||+|++|+++++.|+++|++|++++|+.... .............|+.+.+++.+.+.++|++||++|..
T Consensus        11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~   90 (245)
T PRK12367         11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGKEESLDKQLASLDVLILNHGIN   90 (245)
T ss_pred             hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCccC
Confidence            35567999999999999999999999999999998876221 10000001111128889898888899999999999864

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.33  E-value=9.7e-12  Score=77.59  Aligned_cols=78  Identities=12%  Similarity=0.168  Sum_probs=55.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-c----cccc-cccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-T----SKLE-IHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~----~~~~-~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      |++++++|+||+|++|+++++.|+++|+++.++.|+...... .    .... .... ..|+.+++++.+++.       
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            456799999999999999999999999998777776543210 0    0000 0111 138888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+|||++|..
T Consensus        84 ~id~vi~~ag~~   95 (249)
T PRK12825         84 RIDILVNNAGIF   95 (249)
T ss_pred             CCCEEEECCccC
Confidence            569999999853

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.32  E-value=6e-12  Score=79.40  Aligned_cols=82  Identities=10%  Similarity=0.210  Sum_probs=61.1

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhhc-----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISILK-----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~-----   70 (104)
                      |+.+|+.++++|+||+|.+|+++++.|++.|+.+.+++|+++..+.....     .......|+.+++++.++++     
T Consensus         1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            67778888999999999999999999999999999998887543111110     00111138888888877664     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        .+|+|||++|..
T Consensus        81 ~~~id~vi~~ag~~   94 (258)
T PRK08628         81 FGRIDGLVNNAGVN   94 (258)
T ss_pred             cCCCCEEEECCccc
Confidence              579999999953

>PLN02996 fatty acyl-CoA reductase

Probab=99.32  E-value=1.3e-11  Score=84.62  Aligned_cols=99  Identities=21%  Similarity=0.360  Sum_probs=66.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCccccccc--------------------------cccccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTSKL--------------------------EIHKEF   56 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~~~--------------------------~~~~~~   56 (104)
                      +.++|+|||||||+|+++++.|+..+.   +|+++.|...........                          .....+
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i   89 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPV   89 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEE
Confidence            457899999999999999999987543   578888865432110000                          000101


Q ss_pred             -cccc-------ChHHHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           57 -QELD-------EHEKIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        57 -~d~~-------~~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                       .|+.       +.+.+..+++++|+|||+|+...            +.++.++++++.+.+.+++||
T Consensus        90 ~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V  157 (491)
T PLN02996         90 PGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLL  157 (491)
T ss_pred             ecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEE
Confidence             1554       44556777889999999998744            456778899888753366653

>PRK06398 aldose dehydrogenase; Validated

Probab=99.32  E-value=4.8e-11  Score=75.58  Aligned_cols=73  Identities=12%  Similarity=0.267  Sum_probs=56.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      ++.++++|+|++|.+|.++++.|.+.|++|++++|+....   ......  ..|+.+++++.++++       ++|++||
T Consensus         4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---~~~~~~--~~D~~~~~~i~~~~~~~~~~~~~id~li~   78 (258)
T PRK06398          4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---NDVDYF--KVDVSNKEQVIKGIDYVISKYGRIDILVN   78 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---CceEEE--EccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5567999999999999999999999999999999886443   111111  137888877766653       5899999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      ++|..
T Consensus        79 ~Ag~~   83 (258)
T PRK06398         79 NAGIE   83 (258)
T ss_pred             CCCCC
Confidence            99864

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.32  E-value=1e-11  Score=79.11  Aligned_cols=75  Identities=13%  Similarity=0.196  Sum_probs=55.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--ccccc-cccccChHHHHHhhc-------cccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKE-FQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~-~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      ++++|+||+|++|++++++|++.|+.|.++.|+++........  ..... ..|+.|.+++.+++.       ++|+|||
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5799999999999999999999999999999886443211100  01111 138888887776653       4799999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      ++|..
T Consensus        83 ~ag~~   87 (276)
T PRK06482         83 NAGYG   87 (276)
T ss_pred             CCCCC
Confidence            99874

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.31  E-value=1.1e-11  Score=78.09  Aligned_cols=75  Identities=17%  Similarity=0.218  Sum_probs=56.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc------ccccccccccccChHHHHHhhc-cccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS------KLEIHKEFQELDEHEKIISILK-EVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~------~~~~~~~~~d~~~~~~~~~~~~-~~d~vv~~a~   80 (104)
                      ++++|+||+|++|+++++.|++.|++|+++.|+++......      .........|+.+++++.+++. ++|+|||++|
T Consensus         3 ~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~ag   82 (257)
T PRK09291          3 KTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNAG   82 (257)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECCC
Confidence            58999999999999999999999999999998754321100      0011111138899999988876 8999999998


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        83 ~~   84 (257)
T PRK09291         83 IG   84 (257)
T ss_pred             cC
Confidence            64

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=99.30  E-value=1.2e-11  Score=82.13  Aligned_cols=88  Identities=19%  Similarity=0.330  Sum_probs=69.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccccccc--cccccc-ccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKL--EIHKEF-QELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~--~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |++++|+|| |++|+.++..|++++ .+|++.+|+.++.......  ...... .|..+.+++.+++++.|+|||++++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~   79 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPF   79 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCch
Confidence            468999998 999999999999988 8999999997665322111  111111 28999999999999999999999986


Q ss_pred             ChhhHHHHHHHHHHhC
Q 046878           83 QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~   98 (104)
                      .   ...++++|.+.+
T Consensus        80 ~---~~~i~ka~i~~g   92 (389)
T COG1748          80 V---DLTILKACIKTG   92 (389)
T ss_pred             h---hHHHHHHHHHhC
Confidence            4   358888998887

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.30  E-value=7.4e-12  Score=79.73  Aligned_cols=81  Identities=14%  Similarity=0.217  Sum_probs=59.3

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc------cccc-cccccChHHHHHhhc--
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE------IHKE-FQELDEHEKIISILK--   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~------~~~~-~~d~~~~~~~~~~~~--   70 (104)
                      |+..|+.++++|+|++|++|+++++.|+++|++|.+++|+++..... ....      .... ..|+.+++++.++++  
T Consensus         1 ~~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (276)
T PRK05875          1 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA   80 (276)
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence            45567778999999999999999999999999999999876443111 1100      0111 128888887777664  


Q ss_pred             -----cccEEEEcccC
Q 046878           71 -----EVGVVISTVAY   81 (104)
Q Consensus        71 -----~~d~vv~~a~~   81 (104)
                           .+|++||++|.
T Consensus        81 ~~~~~~~d~li~~ag~   96 (276)
T PRK05875         81 TAWHGRLHGVVHCAGG   96 (276)
T ss_pred             HHHcCCCCEEEECCCc
Confidence                 57999999985

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.30  E-value=1.8e-11  Score=77.36  Aligned_cols=81  Identities=14%  Similarity=0.188  Sum_probs=56.7

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhhc-----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISILK-----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~-----   70 (104)
                      |...++.++++|+||+|++|+++++.|+++|++|.+++|++.........     .......|+.+++++.+++.     
T Consensus         2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            34456778999999999999999999999999999999874221100100     11111127888776665543     


Q ss_pred             --cccEEEEcccC
Q 046878           71 --EVGVVISTVAY   81 (104)
Q Consensus        71 --~~d~vv~~a~~   81 (104)
                        ++|++||++|.
T Consensus        82 ~~~id~lv~nAg~   94 (260)
T PRK12823         82 FGRIDVLINNVGG   94 (260)
T ss_pred             cCCCeEEEECCcc
Confidence              57999999984

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.30  E-value=6.6e-12  Score=79.28  Aligned_cols=80  Identities=13%  Similarity=0.251  Sum_probs=59.0

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc-c--ccccccccChHHHHHhhc-------c
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE-I--HKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~-~--~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +.++.++++|+||+|++|+++++.|+++|++|+++.|+++..+.... .. .  .....|+.+++++.++++       +
T Consensus         7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (264)
T PRK12829          7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGG   86 (264)
T ss_pred             hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            44666899999999999999999999999999999997654321110 00 0  111238888887776653       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus        87 ~d~vi~~ag~~   97 (264)
T PRK12829         87 LDVLVNNAGIA   97 (264)
T ss_pred             CCEEEECCCCC
Confidence            89999999975

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.30  E-value=5.6e-11  Score=73.89  Aligned_cols=72  Identities=19%  Similarity=0.299  Sum_probs=55.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc------cccEEEEcc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK------EVGVVISTV   79 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vv~~a   79 (104)
                      +.++++|+||+|++|+++++.|+++|++|++++|+.... .+.  ...  ..|+.+++++.+++.      ++|++||++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~--~~~--~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a   76 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-FPG--ELF--ACDLADIEQTAATLAQINEIHPVDAIVNNV   76 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-cCc--eEE--EeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence            446899999999999999999999999999999987542 111  111  137888887777664      579999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      |..
T Consensus        77 g~~   79 (234)
T PRK07577         77 GIA   79 (234)
T ss_pred             CCC
Confidence            974

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.30  E-value=1.1e-11  Score=77.11  Aligned_cols=82  Identities=16%  Similarity=0.156  Sum_probs=58.7

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--cccc-ccccccChHHHHHhhc------
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--EIHK-EFQELDEHEKIISILK------   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~~~~-~~~d~~~~~~~~~~~~------   70 (104)
                      |...++.++++|+|++|++|+++++.|+++|++|.+++|++.+.... ...  .... ...|+.|.+++.++++      
T Consensus         1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            44556678999999999999999999999999999999976542110 000  0011 1137888777766654      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|+|||++|..
T Consensus        81 ~~~d~vi~~ag~~   93 (239)
T PRK12828         81 GRLDALVNIAGAF   93 (239)
T ss_pred             CCcCEEEECCccc
Confidence             579999999863

>PRK06196 oxidoreductase; Provisional

Probab=99.29  E-value=1.9e-11  Score=79.42  Aligned_cols=78  Identities=15%  Similarity=0.221  Sum_probs=57.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccccccc-ccccChHHHHHhh-------ccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEF-QELDEHEKIISIL-------KEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~-~d~~~~~~~~~~~-------~~~d~v   75 (104)
                      ++.++++|+||+|++|+++++.|+++|++|++++|+++..+.. ........+ .|+.|.+++.+++       .++|++
T Consensus        24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l  103 (315)
T PRK06196         24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL  103 (315)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            4557899999999999999999999999999999986543211 111111111 2888888776665       358999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus       104 i~nAg~~  110 (315)
T PRK06196        104 INNAGVM  110 (315)
T ss_pred             EECCCCC
Confidence            9999864

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.29  E-value=1.6e-11  Score=77.47  Aligned_cols=82  Identities=13%  Similarity=0.173  Sum_probs=58.7

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-cccccccccccccccChHHHHHhhc-------cc
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-RTSKLEIHKEFQELDEHEKIISILK-------EV   72 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~-------~~   72 (104)
                      |...++.++++|+||+|.+|+++++.|.+.|++|.++.++.+... ............|+.+++++.++++       ++
T Consensus         1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06463          1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRV   80 (255)
T ss_pred             CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            666677789999999999999999999999999988776543221 1110111111128888887777654       57


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        81 d~li~~ag~~   90 (255)
T PRK06463         81 DVLVNNAGIM   90 (255)
T ss_pred             CEEEECCCcC
Confidence            9999999874

>PRK06194 hypothetical protein; Provisional

Probab=99.29  E-value=1e-11  Score=79.43  Aligned_cols=79  Identities=9%  Similarity=0.099  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---c-ccc-ccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---E-IHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~-~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      |++++++||||+|++|+++++.|+++|++|++++|+.+..... ...   . ... ...|+.|.+++.++++       .
T Consensus         4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   83 (287)
T PRK06194          4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA   83 (287)
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999875443111 000   0 011 1138888888877765       4


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|+|||++|...
T Consensus        84 id~vi~~Ag~~~   95 (287)
T PRK06194         84 VHLLFNNAGVGA   95 (287)
T ss_pred             CCEEEECCCCCC
Confidence            799999999743

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.29  E-value=2.1e-11  Score=78.61  Aligned_cols=96  Identities=22%  Similarity=0.398  Sum_probs=71.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc----ccccccc-ccc--c--ccccChHHHHHhhc--cccEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS----RTSKLEI-HKE--F--QELDEHEKIISILK--EVGVVI   76 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~----~~~~~~~-~~~--~--~d~~~~~~~~~~~~--~~d~vv   76 (104)
                      ++|+||||+||+|++.+-+|+++|+.|.+++.-.....    ...+... -..  +  .|+.|.+.|++.|+  ..|.|+
T Consensus         3 ~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~   82 (343)
T KOG1371|consen    3 KHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVM   82 (343)
T ss_pred             cEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEE
Confidence            58999999999999999999999999999986432221    1111100 011  1  29999999999986  479999


Q ss_pred             EcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           77 STVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+|+...               ..++.++++.+++.+ ++.+|
T Consensus        83 Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V  124 (343)
T KOG1371|consen   83 HFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALV  124 (343)
T ss_pred             eehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEE
Confidence            9998744               457789999999997 77653

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.29  E-value=2.3e-11  Score=76.18  Aligned_cols=79  Identities=9%  Similarity=0.140  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----cccc-cccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+||+|++|.++++.|+++|+.|++++|++++.... ....    .... ..|+.+++++.+++.       .
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4457899999999999999999999999999999986433110 0000    0111 128888888877764       5


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|+|||++|...
T Consensus        84 ~d~vi~~ag~~~   95 (251)
T PRK12826         84 LDILVANAGIFP   95 (251)
T ss_pred             CCEEEECCCCCC
Confidence            799999998743

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.28  E-value=2.1e-11  Score=75.68  Aligned_cols=75  Identities=15%  Similarity=0.209  Sum_probs=55.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccc-ccccccChHHHHHhhc-----cccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK-EFQELDEHEKIISILK-----EVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~-----~~d~vv~~a~~   81 (104)
                      ++++|+|++|++|+++++.|.+.|++|.+++|++...+......... ...|+.|++++.++++     ++|+|||++|.
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~   81 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI   81 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence            57999999999999999999999999999999876542111111111 1127888777766654     58999999987


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus        82 ~   82 (225)
T PRK08177         82 S   82 (225)
T ss_pred             c
Confidence            4

>PRK09186 flagellin modification protein A; Provisional

Probab=99.28  E-value=4.9e-11  Score=75.06  Aligned_cols=77  Identities=16%  Similarity=0.160  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc------cccccc-cccccChHHHHHhhcc-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK------LEIHKE-FQELDEHEKIISILKE-----   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~------~~~~~~-~~d~~~~~~~~~~~~~-----   71 (104)
                      ++.++++|+|++|++|+++++.|++.|++|.+++|+++..+.. ..      ...... ..|+.|++++.++++.     
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            3567999999999999999999999999999998886543110 00      001111 2388888888777653     


Q ss_pred             --ccEEEEcccC
Q 046878           72 --VGVVISTVAY   81 (104)
Q Consensus        72 --~d~vv~~a~~   81 (104)
                        +|++||+++.
T Consensus        82 ~~id~vi~~A~~   93 (256)
T PRK09186         82 GKIDGAVNCAYP   93 (256)
T ss_pred             CCccEEEECCcc
Confidence              7999999964

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.28  E-value=9.7e-12  Score=76.88  Aligned_cols=76  Identities=17%  Similarity=0.305  Sum_probs=56.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccc-cccccChHHHHHhhc---cccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKE-FQELDEHEKIISILK---EVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~-~~d~~~~~~~~~~~~---~~d~vv~~a~   80 (104)
                      ++++++|+||+|++|+++++.|+++ ++|++++|++++.+... ....... ..|+.|++++.+++.   ++|+|||++|
T Consensus         2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   80 (227)
T PRK08219          2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG   80 (227)
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            3468999999999999999999999 99999999865431111 0111111 138889888888876   5899999998


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        81 ~~   82 (227)
T PRK08219         81 VA   82 (227)
T ss_pred             cC
Confidence            74

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.28  E-value=2.6e-11  Score=77.29  Aligned_cols=78  Identities=12%  Similarity=0.255  Sum_probs=55.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-cccccc-ccccChHHHHHhhc-------cccEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-EIHKEF-QELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-~~~~~~-~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      ++++++|+||+|++|+++++.|+++|++|.+++|+++....... . .....+ .|+.+++++.+.+.       .+|++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV   81 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            34689999999999999999999999999999988654311100 0 011111 27888877766553       57999


Q ss_pred             EEcccCcC
Q 046878           76 ISTVAYPQ   83 (104)
Q Consensus        76 v~~a~~~~   83 (104)
                      ||++|...
T Consensus        82 i~~ag~~~   89 (275)
T PRK08263         82 VNNAGYGL   89 (275)
T ss_pred             EECCCCcc
Confidence            99999753

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.28  E-value=3.9e-11  Score=75.04  Aligned_cols=78  Identities=13%  Similarity=0.146  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHhhc---cccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISILK---EVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a~   80 (104)
                      ++.++++|+|++|++|+++++.|.++|++|.+++|++++.+.... ........|+.+.+++.+++.   .+|+|||++|
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag   86 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG   86 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            455799999999999999999999999999999998654321111 011111137888887777765   4799999998


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        87 ~~   88 (245)
T PRK07060         87 IA   88 (245)
T ss_pred             CC
Confidence            74

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.27  E-value=1.5e-11  Score=77.52  Aligned_cols=81  Identities=9%  Similarity=0.106  Sum_probs=58.9

Q ss_pred             CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhc-------ccc
Q 046878            2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~-------~~d   73 (104)
                      ...|+.++++|+||+|++|.++++.|.++|++|.+++|+....+.. ..........|+.+++++.+.++       ++|
T Consensus         2 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (255)
T PRK06057          2 SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVD   81 (255)
T ss_pred             CccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            3457778999999999999999999999999999999876543111 11111111138888887777664       469


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        82 ~vi~~ag~~   90 (255)
T PRK06057         82 IAFNNAGIS   90 (255)
T ss_pred             EEEECCCcC
Confidence            999999863

>PRK09135 pteridine reductase; Provisional

Probab=99.27  E-value=3.5e-11  Score=75.30  Aligned_cols=76  Identities=11%  Similarity=0.184  Sum_probs=55.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----cccc-ccccccChHHHHHhhc-------
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHK-EFQELDEHEKIISILK-------   70 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~-~~~d~~~~~~~~~~~~-------   70 (104)
                      +.++++|+||+|++|++++++|++.|++|++++|+.... +.. ...     .... ...|+.+.+++.++++       
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            346899999999999999999999999999999874321 100 000     0011 1128888888877765       


Q ss_pred             cccEEEEcccC
Q 046878           71 EVGVVISTVAY   81 (104)
Q Consensus        71 ~~d~vv~~a~~   81 (104)
                      ++|+|||++|.
T Consensus        85 ~~d~vi~~ag~   95 (249)
T PRK09135         85 RLDALVNNASS   95 (249)
T ss_pred             CCCEEEECCCC
Confidence            47999999985

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.27  E-value=2.7e-11  Score=75.99  Aligned_cols=78  Identities=12%  Similarity=0.199  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--c-cccc-cccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--E-IHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~-~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      ++.++++|+||+|++|++++++|+++|++|.++.|+.+..... ...  . .... ..|+.|++++.++++       ++
T Consensus         3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i   82 (252)
T PRK06138          3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL   82 (252)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4567999999999999999999999999999999886443111 000  0 0111 128888888877654       68


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |+|||++|..
T Consensus        83 d~vi~~ag~~   92 (252)
T PRK06138         83 DVLVNNAGFG   92 (252)
T ss_pred             CEEEECCCCC
Confidence            9999999964

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.27  E-value=3e-11  Score=76.05  Aligned_cols=76  Identities=17%  Similarity=0.317  Sum_probs=56.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      ++.++++|+||+|.+|+++++.|++.|++|.+++|+.+..........  ...|+.+++++.+++.       ++|++||
T Consensus         4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   81 (252)
T PRK07856          4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVDGRPAEF--HAADVRDPDQVAALVDAIVERHGRLDVLVN   81 (252)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhcCCceEE--EEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            456799999999999999999999999999999998643101111111  1137888887777664       4699999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      ++|..
T Consensus        82 ~ag~~   86 (252)
T PRK07856         82 NAGGS   86 (252)
T ss_pred             CCCCC
Confidence            99863

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.26  E-value=2.5e-11  Score=76.74  Aligned_cols=82  Identities=10%  Similarity=0.132  Sum_probs=60.1

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc------cc-cccccccChHHHHHhhc--
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE------IH-KEFQELDEHEKIISILK--   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~------~~-~~~~d~~~~~~~~~~~~--   70 (104)
                      |...++.++++|+|++|.+|.++++.|+++|++|.+++|+.+..+... ...      .. ....|+.+++++.+++.  
T Consensus         1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence            556677789999999999999999999999999999999765432110 000      01 11128888887776654  


Q ss_pred             -----cccEEEEcccCc
Q 046878           71 -----EVGVVISTVAYP   82 (104)
Q Consensus        71 -----~~d~vv~~a~~~   82 (104)
                           .+|++||++|..
T Consensus        81 ~~~~g~id~li~~ag~~   97 (260)
T PRK07063         81 EEAFGPLDVLVNNAGIN   97 (260)
T ss_pred             HHHhCCCcEEEECCCcC
Confidence                 689999999964

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.26  E-value=1.5e-11  Score=77.40  Aligned_cols=82  Identities=12%  Similarity=0.156  Sum_probs=59.5

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----cccc-cccccChHHHHHhhc----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKE-FQELDEHEKIISILK----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~-~~d~~~~~~~~~~~~----   70 (104)
                      |...++.++++|+|++|.+|.++++.|+++|++|.+++|+++..+.. ....    .... ..|+.+++++.++++    
T Consensus         1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            55556778999999999999999999999999999999986543111 0000    0111 138888887776654    


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         .+|++||++|..
T Consensus        81 ~~g~id~li~~ag~~   95 (253)
T PRK06172         81 AYGRLDYAFNNAGIE   95 (253)
T ss_pred             HhCCCCEEEECCCCC
Confidence               469999999863

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.26  E-value=6.2e-11  Score=79.54  Aligned_cols=78  Identities=13%  Similarity=0.218  Sum_probs=59.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc-ccccc-ccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE-IHKEF-QELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~-~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +++++++|+||+|++|+++++.|.++|++|.+++|++++.... .... ....+ .|+.|++++.+.+.++|++||++|.
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            4567899999999999999999999999999999876543110 0000 01111 2888999999999999999999986


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus       256 ~  256 (406)
T PRK07424        256 N  256 (406)
T ss_pred             C
Confidence            4

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.26  E-value=4.1e-11  Score=75.70  Aligned_cols=75  Identities=12%  Similarity=0.097  Sum_probs=55.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc--cccc-cccccChHHHHHhhc--------cccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE--IHKE-FQELDEHEKIISILK--------EVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~--~~~~-~~d~~~~~~~~~~~~--------~~d~v   75 (104)
                      ++++|+||+|++|+++++.|+++|+.|.+++|+.+..+.... ..  .... ..|+.+.+++.+++.        ++|+|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            589999999999999999999999999999988654321100 00  1111 128888887776654        45999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        82 i~~ag~~   88 (260)
T PRK08267         82 FNNAGIL   88 (260)
T ss_pred             EECCCCC
Confidence            9999975

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.25  E-value=3.7e-11  Score=76.47  Aligned_cols=78  Identities=13%  Similarity=0.131  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccc-cccccChHHHHHhh-------ccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKE-FQELDEHEKIISIL-------KEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~-~~d~~~~~~~~~~~-------~~~d~v   75 (104)
                      |++++++||||+|.+|+++++.|+++|++|.+.+|+++..... ........ ..|+.+++++.+++       .++|++
T Consensus         3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   82 (273)
T PRK07825          3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL   82 (273)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4557899999999999999999999999999998876543211 11111111 13888888766554       357999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        83 i~~ag~~   89 (273)
T PRK07825         83 VNNAGVM   89 (273)
T ss_pred             EECCCcC
Confidence            9999964

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.25  E-value=5.6e-11  Score=75.34  Aligned_cols=78  Identities=14%  Similarity=0.205  Sum_probs=57.3

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----cccccc-ccccChHHHHHhhc-------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      .++.++++|+|++|++|.++++.|+++|++|.+++|+++..+.. ...    .....+ .|+.+++++.+++.       
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45668999999999999999999999999999999986543111 000    001111 38888888776654       


Q ss_pred             cccEEEEcccC
Q 046878           71 EVGVVISTVAY   81 (104)
Q Consensus        71 ~~d~vv~~a~~   81 (104)
                      ++|+|||++|.
T Consensus        87 ~id~vi~~Ag~   97 (263)
T PRK07814         87 RLDIVVNNVGG   97 (263)
T ss_pred             CCCEEEECCCC
Confidence            57999999985

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.25  E-value=2.2e-11  Score=76.09  Aligned_cols=82  Identities=16%  Similarity=0.218  Sum_probs=58.9

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccc-ccccccChHHHHHhhc----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHK-EFQELDEHEKIISILK----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~-~~~d~~~~~~~~~~~~----   70 (104)
                      |...++.++++|+|++|++|.+++++|++.|++|.+++|++...... ....    ... ...|+.+++++.++++    
T Consensus         1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            33345567899999999999999999999999999999986443110 0000    011 1128888888777764    


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|+|||++|..
T Consensus        81 ~~~~id~vi~~ag~~   95 (239)
T PRK07666         81 ELGSIDILINNAGIS   95 (239)
T ss_pred             HcCCccEEEEcCccc
Confidence               689999999864

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1.3e-10  Score=72.87  Aligned_cols=93  Identities=12%  Similarity=0.151  Sum_probs=64.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc----cccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL----EIHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~----~~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      |+.++++|+||+|++|+++++.|+++|++|+++.|+.... +. ....    .....+ .|+.+++++.++++       
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            4557999999999999999999999999999888875321 00 0000    001111 28888888776654       


Q ss_pred             cccEEEEcccCcC-------------hhhHHHHHHHHHHh
Q 046878           71 EVGVVISTVAYPQ-------------LLDQLKIVDAIKVA   97 (104)
Q Consensus        71 ~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~   97 (104)
                      .+|++||+++...             ...+.++++++.+.
T Consensus        84 ~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~  123 (248)
T PRK07806         84 GLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPL  123 (248)
T ss_pred             CCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhh
Confidence            5899999997632             23456777777653

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.25  E-value=1.6e-11  Score=78.16  Aligned_cols=75  Identities=16%  Similarity=0.288  Sum_probs=55.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-------ccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-------KEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv~~a~   80 (104)
                      ++++|+||+|++|+++++.|.+.|++|++++|+.................|+.+++++.+++       .++|++||++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag   81 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG   81 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            58999999999999999999999999999998865432111111111113788887776665       35799999999


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        82 ~~   83 (274)
T PRK05693         82 YG   83 (274)
T ss_pred             CC
Confidence            64

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.25  E-value=3.8e-11  Score=76.61  Aligned_cols=77  Identities=12%  Similarity=0.201  Sum_probs=54.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----cc---cccc-cccccChHHHHH---h---hcc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK----LE---IHKE-FQELDEHEKIIS---I---LKE   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~~---~~~~-~~d~~~~~~~~~---~---~~~   71 (104)
                      ++++++|+||+|++|+++++.|+++|++|++++|++........    ..   .... ..|+.|++++.+   .   +..
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~   81 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGR   81 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCC
Confidence            44689999999999999999999999999999988654311100    00   0111 128888777655   1   235


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus        82 id~vv~~ag~~   92 (280)
T PRK06914         82 IDLLVNNAGYA   92 (280)
T ss_pred             eeEEEECCccc
Confidence            79999999864

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.25  E-value=3.5e-11  Score=78.84  Aligned_cols=94  Identities=17%  Similarity=0.315  Sum_probs=63.7

Q ss_pred             eEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccc------------c----cccccc-ccccC------hH
Q 046878            9 KILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSK------------L----EIHKEF-QELDE------HE   63 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~------------~----~~~~~~-~d~~~------~~   63 (104)
                      +|+||||||++|+++++.|+++|  ..|+++.|+.........            .    .....+ .|+.+      .+
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999998  569999987642100000            0    011111 15433      35


Q ss_pred             HHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccC
Q 046878           64 KIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        64 ~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                      .+..+..++|+|||+++...            +.++.++++++.+.+ +++|
T Consensus        81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~  131 (367)
T TIGR01746        81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPL  131 (367)
T ss_pred             HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceE
Confidence            66677789999999998643            345678888888765 5554

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.25  E-value=5.6e-11  Score=75.07  Aligned_cols=76  Identities=18%  Similarity=0.215  Sum_probs=56.4

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-------ccccEE
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-------KEVGVV   75 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~v   75 (104)
                      ..++.++++|+||+|.+|+++++.|.++|++|.+++|+.... ......  ....|+.+++++.+.+       .++|++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~~~id~v   81 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-LPEGVE--FVAADLTTAEGCAAVARAVLERLGGVDIL   81 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-cCCcee--EEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            356678999999999999999999999999999999986432 111111  1113788877665543       467999


Q ss_pred             EEcccC
Q 046878           76 ISTVAY   81 (104)
Q Consensus        76 v~~a~~   81 (104)
                      ||++|.
T Consensus        82 i~~ag~   87 (260)
T PRK06523         82 VHVLGG   87 (260)
T ss_pred             EECCcc
Confidence            999985

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.24  E-value=6.1e-11  Score=74.76  Aligned_cols=78  Identities=10%  Similarity=0.239  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccc----ccc-cccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEI----HKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~----~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+|++|++|+++++.|+++|++|.+.+|++.+.+.. .....    ... ..|+.+++++.+++.       .
T Consensus         8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (255)
T PRK07523          8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP   87 (255)
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4567999999999999999999999999999999886543111 01100    111 128888887777764       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      .|++||++|..
T Consensus        88 ~d~li~~ag~~   98 (255)
T PRK07523         88 IDILVNNAGMQ   98 (255)
T ss_pred             CCEEEECCCCC
Confidence            79999999874

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.24  E-value=5.6e-11  Score=75.93  Aligned_cols=74  Identities=23%  Similarity=0.387  Sum_probs=62.7

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC---
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ---   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~---   83 (104)
                      +++|+|++|.+|++|++.|. .+++|..++|..               -|++|++.+.+.+.  .+|+|||+|++..   
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt~vD~   65 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE---------------LDITDPDAVLEVIRETRPDVVINAAAYTAVDK   65 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------ccccChHHHHHHHHhhCCCEEEECcccccccc
Confidence            49999999999999999998 568898888776               36889999999986  4699999999976   


Q ss_pred             ------------hhhHHHHHHHHHHhC
Q 046878           84 ------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~~~   98 (104)
                                  ..+..+++++|.+.+
T Consensus        66 aE~~~e~A~~vNa~~~~~lA~aa~~~g   92 (281)
T COG1091          66 AESEPELAFAVNATGAENLARAAAEVG   92 (281)
T ss_pred             ccCCHHHHHHhHHHHHHHHHHHHHHhC
Confidence                        345678999998876

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.24  E-value=4.8e-11  Score=75.39  Aligned_cols=78  Identities=18%  Similarity=0.226  Sum_probs=56.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc----cc-cccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE----IH-KEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~----~~-~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+|++|++|.++++.|++.|++|++++|+..+.+.... ..    .. ....|+.|++++.+++.       +
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            456799999999999999999999999999999987644311110 00    01 11138888888866553       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      .|+|||++|..
T Consensus        90 id~vi~~ag~~  100 (259)
T PRK08213         90 VDILVNNAGAT  100 (259)
T ss_pred             CCEEEECCCCC
Confidence            79999999863

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.23  E-value=5.6e-11  Score=74.75  Aligned_cols=75  Identities=13%  Similarity=0.249  Sum_probs=54.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc---cccccccccccChHHHHHhhc-------cccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK---LEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      |+++|+|++|++|.++++.|+++|++|.+++|++++.+....   ........|+.+.+++.++++       ++|++||
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~   80 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN   80 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            479999999999999999999999999999998654321100   011111138888887776653       6899999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      ++|..
T Consensus        81 ~ag~~   85 (248)
T PRK10538         81 NAGLA   85 (248)
T ss_pred             CCCcc
Confidence            99863

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.23  E-value=5.8e-11  Score=82.92  Aligned_cols=98  Identities=19%  Similarity=0.305  Sum_probs=65.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCccccccc--------------------------cccc-c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTSKL--------------------------EIHK-E   55 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~~~--------------------------~~~~-~   55 (104)
                      +.++|+|||||||+|+.+++.|++.+.   +|+++.|........+..                          .... .
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v  197 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV  197 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence            457999999999999999999997654   578888864332100000                          0011 1


Q ss_pred             cccccCh------HHHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccC
Q 046878           56 FQELDEH------EKIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        56 ~~d~~~~------~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                      ..|+.++      +..+.+..++|+|||+|+...            +.++.++++.+.+.+.+++|
T Consensus       198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~f  263 (605)
T PLN02503        198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLF  263 (605)
T ss_pred             EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeE
Confidence            1266664      455666678999999999754            45677889988775435554

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.23  E-value=4e-11  Score=75.10  Aligned_cols=82  Identities=13%  Similarity=0.169  Sum_probs=59.3

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccc-ccccccChHHHHHhh-----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHK-EFQELDEHEKIISIL-----   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~-~~~d~~~~~~~~~~~-----   69 (104)
                      |-..++.++++|+|++|.+|+++++.|+++|+++.+++|++++.... ....    ... ...|+.+++++.+++     
T Consensus         1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34456678999999999999999999999999999998876543211 0000    011 112888888877766     


Q ss_pred             --ccccEEEEcccCc
Q 046878           70 --KEVGVVISTVAYP   82 (104)
Q Consensus        70 --~~~d~vv~~a~~~   82 (104)
                        .++|++||++|..
T Consensus        81 ~~~~id~vi~~ag~~   95 (250)
T PRK12939         81 ALGGLDGLVNNAGIT   95 (250)
T ss_pred             HcCCCCEEEECCCCC
Confidence              3589999999974

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.23  E-value=8.4e-11  Score=83.14  Aligned_cols=78  Identities=18%  Similarity=0.340  Sum_probs=59.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC-
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ-   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~-   83 (104)
                      .|+|+|||++|++|+++++.|.++|++|....                  .++.|.+.+...+.  ++|+|||+|+... 
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~------------------~~l~d~~~v~~~i~~~~pd~Vih~Aa~~~~  441 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK------------------GRLEDRSSLLADIRNVKPTHVFNAAGVTGR  441 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEeec------------------cccccHHHHHHHHHhhCCCEEEECCcccCC
Confidence            46899999999999999999999898873111                  13556666666665  6899999998651 


Q ss_pred             -----------------hhhHHHHHHHHHHhCCcccC
Q 046878           84 -----------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        84 -----------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                                       ...+.+++++|.+.+ ++++
T Consensus       442 ~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~~v  477 (668)
T PLN02260        442 PNVDWCESHKVETIRANVVGTLTLADVCRENG-LLMM  477 (668)
T ss_pred             CCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-CeEE
Confidence                             335678999999887 6543

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.23  E-value=7.4e-11  Score=74.23  Aligned_cols=78  Identities=10%  Similarity=0.186  Sum_probs=54.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-ccc----cccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SKL----EIHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~~----~~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      |+.++++|+|++|++|+++++.|+++|+.|.++ .|+....... ...    .....+ .|+.|++++.++++       
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            455799999999999999999999999988775 4544322100 000    011111 38888888877654       


Q ss_pred             ------cccEEEEcccCc
Q 046878           71 ------EVGVVISTVAYP   82 (104)
Q Consensus        71 ------~~d~vv~~a~~~   82 (104)
                            ++|++||++|..
T Consensus        84 ~~~~~~~id~vi~~ag~~  101 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIG  101 (254)
T ss_pred             cccCCCCccEEEECCCCC
Confidence                  479999999874

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.22  E-value=4.4e-11  Score=75.78  Aligned_cols=78  Identities=12%  Similarity=0.198  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-cccc-cccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKE-FQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~-~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++|+|++|.+|+++++.|+++|++|.+++|+....+... ... .... ..|+.+++++.+++.       .+|+
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   83 (261)
T PRK08265          4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI   83 (261)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            55679999999999999999999999999999999865431111 100 1111 138888887777654       5799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        84 lv~~ag~~   91 (261)
T PRK08265         84 LVNLACTY   91 (261)
T ss_pred             EEECCCCC
Confidence            99999863

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.22  E-value=6e-11  Score=74.50  Aligned_cols=75  Identities=12%  Similarity=0.193  Sum_probs=53.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----c-cccc-ccccccChHHHHHhh-------ccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK----L-EIHK-EFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~-~~~~-~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ++++|+|++|++|+++++.|+++|++|++++|++...+....    . .... ...|+.+++++.+++       .+.|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            579999999999999999999999999999998643311100    0 0111 112888888555543       45799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      |||+++..
T Consensus        82 vi~~a~~~   89 (255)
T TIGR01963        82 LVNNAGIQ   89 (255)
T ss_pred             EEECCCCC
Confidence            99999864

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.22  E-value=8.1e-11  Score=73.78  Aligned_cols=77  Identities=10%  Similarity=0.255  Sum_probs=55.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----ccccc-cccccChHHHHHhhc-------cc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      ++++++|+||+|++|+++++.|++.|++|.+++|+......... .    ..... ..|+.+.+++.+++.       ++
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~   81 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV   81 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            45789999999999999999999999999999887644311100 0    00111 128888887777654       58


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        82 d~vi~~ag~~   91 (250)
T TIGR03206        82 DVLVNNAGWD   91 (250)
T ss_pred             CEEEECCCCC
Confidence            9999999853

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.21  E-value=4.5e-11  Score=75.01  Aligned_cols=77  Identities=10%  Similarity=0.169  Sum_probs=56.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccc-ccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+|++|++|.+++++|+++|++|++++|++...+.. ....    ... ...|+.+.+++.++++       .
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (250)
T PRK07774          4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG   83 (250)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            4557899999999999999999999999999999986433111 0000    011 1138888887766553       5


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|+|||++|.
T Consensus        84 id~vi~~ag~   93 (250)
T PRK07774         84 IDYLVNNAAI   93 (250)
T ss_pred             CCEEEECCCC
Confidence            7999999996

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.21  E-value=8.5e-11  Score=77.15  Aligned_cols=79  Identities=11%  Similarity=0.178  Sum_probs=57.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      .+++++++|+||+|.+|+++++.|+++|++|++++|+++..+.. ...     +......|+.|++++.++++       
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            45667899999999999999999999999999999986543211 000     11111138888887776643       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        85 ~iD~lInnAg~~   96 (334)
T PRK07109         85 PIDTWVNNAMVT   96 (334)
T ss_pred             CCCEEEECCCcC
Confidence            689999999964

>PRK08264 short chain dehydrogenase; Validated

Probab=99.21  E-value=9.9e-11  Score=73.01  Aligned_cols=76  Identities=11%  Similarity=0.203  Sum_probs=57.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhc---cccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK---EVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a~   80 (104)
                      +..++++|+||+|++|+++++.|+++|+ .|.++.|+.++... ..........|+.+.+++.+++.   .+|+|||++|
T Consensus         4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag   82 (238)
T PRK08264          4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNNAG   82 (238)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEECCC
Confidence            3456899999999999999999999998 99999998755421 00111111138888888877765   5799999999


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus        83 ~   83 (238)
T PRK08264         83 I   83 (238)
T ss_pred             c
Confidence            8

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.21  E-value=3.4e-11  Score=77.67  Aligned_cols=78  Identities=14%  Similarity=0.210  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+||+|++|+++++.|+++|++|.+++|+.+..+.. ...     .......|+.|++++.++++       +
T Consensus        38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  117 (293)
T PRK05866         38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG  117 (293)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3457899999999999999999999999999999986443111 000     00011128888887777665       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus       118 id~li~~AG~~  128 (293)
T PRK05866        118 VDILINNAGRS  128 (293)
T ss_pred             CCEEEECCCCC
Confidence            89999999865

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.20  E-value=4.4e-11  Score=77.91  Aligned_cols=77  Identities=16%  Similarity=0.309  Sum_probs=56.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----ccccc-cccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      +++++++||||+|+||.++++.|+++|++|++++|+..+.+.. ...    ..... ..|+.+.+++.+++.       .
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   83 (322)
T PRK07453          4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP   83 (322)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            3567899999999999999999999999999999876443110 000    01111 128888888777664       3


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|++||+||.
T Consensus        84 iD~li~nAg~   93 (322)
T PRK07453         84 LDALVCNAAV   93 (322)
T ss_pred             ccEEEECCcc
Confidence            8999999985

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.20  E-value=1.4e-10  Score=72.79  Aligned_cols=78  Identities=8%  Similarity=0.159  Sum_probs=57.4

Q ss_pred             CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccE
Q 046878            2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ...++.++++|+|++|++|+++++.|++.|++|.++.|+.... ......  ....|+.+++++.++++       .+|+
T Consensus         3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~-~~~~~~--~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (252)
T PRK08220          3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQ-EDYPFA--TFVLDVSDAAAVAQVCQRLLAETGPLDV   79 (252)
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhh-cCCceE--EEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            3345667999999999999999999999999999999876111 011111  11138888887777664       4799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        80 vi~~ag~~   87 (252)
T PRK08220         80 LVNAAGIL   87 (252)
T ss_pred             EEECCCcC
Confidence            99999974

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.20  E-value=3.1e-11  Score=76.05  Aligned_cols=77  Identities=9%  Similarity=0.180  Sum_probs=56.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhh-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISIL-------KE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~-------~~   71 (104)
                      ++.++++|+||+|++|+++++.|+++|++|.+++|+++..+... ..     .......|+.+++++..++       .+
T Consensus         3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (258)
T PRK07890          3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGR   82 (258)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            45579999999999999999999999999999999865432110 00     0011112888888776655       35


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|++||++|.
T Consensus        83 ~d~vi~~ag~   92 (258)
T PRK07890         83 VDALVNNAFR   92 (258)
T ss_pred             ccEEEECCcc
Confidence            7999999986

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.20  E-value=1.6e-10  Score=73.24  Aligned_cols=74  Identities=20%  Similarity=0.291  Sum_probs=61.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++|+|+||||++|+++++.|+++|++|.++.|+++...... ........|+.+++++...+.+.|.++++.+..
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~   74 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL   74 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence            47999999999999999999999999999999987764333 111122238999999999999999999999854

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.6e-10  Score=72.46  Aligned_cols=78  Identities=13%  Similarity=0.123  Sum_probs=53.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-ccccc-ccccChHHHHHhh-------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKEF-QELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~~-~d~~~~~~~~~~~-------~~~d~   74 (104)
                      +++++++|+||+|++|+++++.|++.|++|++++|+.+...... ... ....+ .|+.+.+++.+++       .++|+
T Consensus         4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (249)
T PRK06500          4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            45579999999999999999999999999999988754331110 000 11111 2666666554433       46899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        84 vi~~ag~~   91 (249)
T PRK06500         84 VFINAGVA   91 (249)
T ss_pred             EEECCCCC
Confidence            99999864

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.20  E-value=4.8e-11  Score=76.30  Aligned_cols=78  Identities=15%  Similarity=0.178  Sum_probs=57.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +++++++|||++|++|+++++.|+++|++|.+++|+.+..+... ..     .......|+.|++++.+++.       +
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            55678999999999999999999999999999988864432110 00     00011128888888777654       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        84 id~li~nAg~~   94 (275)
T PRK05876         84 VDVVFSNAGIV   94 (275)
T ss_pred             CCEEEECCCcC
Confidence            79999999964

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.4e-10  Score=73.48  Aligned_cols=78  Identities=15%  Similarity=0.267  Sum_probs=56.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----cccccc-ccccChHHHHHhh------cccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKEF-QELDEHEKIISIL------KEVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~~-~d~~~~~~~~~~~------~~~d   73 (104)
                      ++.++++|+||+|++|.++++.|+++|++|++++|+++..+.....    .....+ .|+.|++++.+++      ..+|
T Consensus         3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id   82 (263)
T PRK09072          3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN   82 (263)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence            4567899999999999999999999999999999986543211100    011111 2788877776654      3579


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        83 ~lv~~ag~~   91 (263)
T PRK09072         83 VLINNAGVN   91 (263)
T ss_pred             EEEECCCCC
Confidence            999999874

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.19  E-value=7.2e-11  Score=73.55  Aligned_cols=78  Identities=17%  Similarity=0.215  Sum_probs=56.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---cccccc-ccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---EIHKEF-QELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~~~~~~-~d~~~~~~~~~~~~-------~~   72 (104)
                      +++++++|+||+|++|+++++.|++.|++|++++|++...... ...   .....+ .|+.+.+++.+.++       ++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3447899999999999999999999999999999986543111 001   111111 27888887776654       68


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |+|||++|..
T Consensus        84 d~vi~~ag~~   93 (237)
T PRK07326         84 DVLIANAGVG   93 (237)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.19  E-value=1.3e-10  Score=73.60  Aligned_cols=81  Identities=10%  Similarity=0.161  Sum_probs=58.2

Q ss_pred             CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-------ccccccccccChHHHHHhh----
Q 046878            2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-------EIHKEFQELDEHEKIISIL----   69 (104)
Q Consensus         2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-------~~~~~~~d~~~~~~~~~~~----   69 (104)
                      ...++.++++|+||+|.+|.++++.|+++|+.|.+++|++++.+... ..       .......|+.|++++.+++    
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            33456689999999999999999999999999999999875442110 00       0001112888887776654    


Q ss_pred             ---ccccEEEEcccCc
Q 046878           70 ---KEVGVVISTVAYP   82 (104)
Q Consensus        70 ---~~~d~vv~~a~~~   82 (104)
                         ..+|++||++|..
T Consensus        83 ~~~g~id~li~~Ag~~   98 (265)
T PRK07062         83 ARFGGVDMLVNNAGQG   98 (265)
T ss_pred             HhcCCCCEEEECCCCC
Confidence               3579999999964

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.19  E-value=2.5e-10  Score=71.44  Aligned_cols=79  Identities=13%  Similarity=0.231  Sum_probs=54.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccc----c----ccccc-cccccChHHHHHhhc----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSK----L----EIHKE-FQELDEHEKIISILK----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~----~----~~~~~-~~d~~~~~~~~~~~~----   70 (104)
                      +++++++|+||+|++|+++++.|+++|++++++.|....... ...    .    ..... ..|+.+++++.+++.    
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            345789999999999999999999999999887764322110 000    0    00111 128888887777653    


Q ss_pred             ---cccEEEEcccCcC
Q 046878           71 ---EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ---~~d~vv~~a~~~~   83 (104)
                         .+|+|||++|...
T Consensus        84 ~~~~~d~vi~~ag~~~   99 (249)
T PRK12827         84 EFGRLDILVNNAGIAT   99 (249)
T ss_pred             HhCCCCEEEECCCCCC
Confidence               5799999999743

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.19  E-value=1.2e-10  Score=75.40  Aligned_cols=78  Identities=10%  Similarity=0.135  Sum_probs=55.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------ccccc-cccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKE-FQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~-~~d~~~~~~~~~~~~------   70 (104)
                      ++.++++|+||+|+||+++++.|+++|++|++++|+.+..... ...      ..... ..|+.+.+++.+++.      
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            3457899999999999999999999999999999875442110 000      00111 128888887766653      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||+||..
T Consensus        94 ~~iD~li~nAg~~  106 (306)
T PRK06197         94 PRIDLLINNAGVM  106 (306)
T ss_pred             CCCCEEEECCccc
Confidence             579999999863

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.19  E-value=6.6e-11  Score=74.96  Aligned_cols=77  Identities=13%  Similarity=0.195  Sum_probs=55.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--cccccc-ccccChHHHHHhh-------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKEF-QELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~~-~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ++.++++|+||+|++|+++++.|++.|++|.+++|+.+..+.....  .....+ .|+.+.+++.+++       .++|+
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   82 (262)
T TIGR03325         3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC   82 (262)
T ss_pred             cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            4667999999999999999999999999999999876443211110  011111 2777777666655       35799


Q ss_pred             EEEcccC
Q 046878           75 VISTVAY   81 (104)
Q Consensus        75 vv~~a~~   81 (104)
                      +||++|.
T Consensus        83 li~~Ag~   89 (262)
T TIGR03325        83 LIPNAGI   89 (262)
T ss_pred             EEECCCC
Confidence            9999985

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.19  E-value=5.5e-11  Score=77.98  Aligned_cols=82  Identities=15%  Similarity=0.206  Sum_probs=59.4

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-c-----cccccccccccChHHHHHhh-----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-K-----LEIHKEFQELDEHEKIISIL-----   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~-----~~~~~~~~d~~~~~~~~~~~-----   69 (104)
                      |...++.++++|+||+|.+|+++++.|.++|++|++++|+.+..+... .     .+......|+.|++++.+++     
T Consensus         1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            334456679999999999999999999999999999999865442110 0     01111112888888777765     


Q ss_pred             --ccccEEEEcccCc
Q 046878           70 --KEVGVVISTVAYP   82 (104)
Q Consensus        70 --~~~d~vv~~a~~~   82 (104)
                        ..+|++||++|..
T Consensus        81 ~~g~iD~lVnnAG~~   95 (330)
T PRK06139         81 FGGRIDVWVNNVGVG   95 (330)
T ss_pred             hcCCCCEEEECCCcC
Confidence              4579999999964

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.19  E-value=1.9e-10  Score=72.87  Aligned_cols=74  Identities=12%  Similarity=0.179  Sum_probs=56.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      ++.++++|+|++|++|.++++.|+++|++|.++++++..... ....  ....|+.+++++.++++       .+|++||
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~-~~~~--~~~~D~~~~~~~~~~~~~~~~~~g~id~li~   83 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH-ENYQ--FVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN   83 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc-CceE--EEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            556789999999999999999999999999999988755421 1111  11137888877766653       5799999


Q ss_pred             cccC
Q 046878           78 TVAY   81 (104)
Q Consensus        78 ~a~~   81 (104)
                      ++|.
T Consensus        84 ~Ag~   87 (266)
T PRK06171         84 NAGI   87 (266)
T ss_pred             CCcc
Confidence            9985

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.19  E-value=7.9e-11  Score=74.39  Aligned_cols=82  Identities=17%  Similarity=0.187  Sum_probs=58.5

Q ss_pred             CCCCCCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--cccccc-ccccChHHHHHhh------
Q 046878            1 MEGENTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKEF-QELDEHEKIISIL------   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~~-~d~~~~~~~~~~~------   69 (104)
                      |++.++.++++|+||+  +.||+++++.|++.|++|++.+|+..........  .....+ .|+.+++++.+++      
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   80 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKER   80 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHH
Confidence            7788888899999998  7999999999999999999988863211100111  011111 3888887776654      


Q ss_pred             -ccccEEEEcccCc
Q 046878           70 -KEVGVVISTVAYP   82 (104)
Q Consensus        70 -~~~d~vv~~a~~~   82 (104)
                       .++|++||++|..
T Consensus        81 ~g~iD~lv~nAg~~   94 (252)
T PRK06079         81 VGKIDGIVHAIAYA   94 (252)
T ss_pred             hCCCCEEEEccccc
Confidence             3579999999863

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.18  E-value=1.8e-10  Score=72.64  Aligned_cols=78  Identities=9%  Similarity=0.136  Sum_probs=56.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-ccc-ccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHK-EFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~-~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++|+|++|++|.++++.|+++|++|++++|+........ ... ... ...|+.+++++.+++.       ++|+
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDI   83 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            34578999999999999999999999999999998865432111 000 011 1128888887777654       5799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        84 li~~ag~~   91 (257)
T PRK07067         84 LFNNAALF   91 (257)
T ss_pred             EEECCCcC
Confidence            99999864

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.18  E-value=2.1e-10  Score=72.85  Aligned_cols=79  Identities=11%  Similarity=0.196  Sum_probs=57.3

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc------ccccccccccChHHHHHhhc------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL------EIHKEFQELDEHEKIISILK------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~------~~~~~~~d~~~~~~~~~~~~------   70 (104)
                      .++.++++|+|++|.+|+++++.|+++|++|.+++|+....+... ..      .......|+.|++++.++++      
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g   84 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIG   84 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhC
Confidence            356678999999999999999999999999999998764431110 00      11111128888887777654      


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        85 ~iD~lv~nag~~   96 (263)
T PRK08339         85 EPDIFFFSTGGP   96 (263)
T ss_pred             CCcEEEECCCCC
Confidence            589999999864

>PLN02253 xanthoxin dehydrogenase

Probab=99.18  E-value=7.2e-11  Score=75.37  Aligned_cols=78  Identities=9%  Similarity=0.117  Sum_probs=56.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---cccc-cccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      +++++++|+|++|++|+++++.|+++|++|.+++|++...+.. ....   .... ..|+.|++++.+++.       ++
T Consensus        16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i   95 (280)
T PLN02253         16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL   95 (280)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4557899999999999999999999999999998875432110 0000   0111 128888888877664       58


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        96 d~li~~Ag~~  105 (280)
T PLN02253         96 DIMVNNAGLT  105 (280)
T ss_pred             CEEEECCCcC
Confidence            9999999863

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.18  E-value=8.7e-11  Score=73.39  Aligned_cols=78  Identities=14%  Similarity=0.193  Sum_probs=55.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-cccc-cccccChHHHHHhh-------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKE-FQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~-~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      +++++++|+|++|++|+++++.|+++|+.|.+.+|+.++.+... ... .... ..|+.+.+++.+++       .++|+
T Consensus         4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   83 (245)
T PRK12936          4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI   83 (245)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            56679999999999999999999999998888777754432110 000 0111 13788888777664       35899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        84 vi~~ag~~   91 (245)
T PRK12936         84 LVNNAGIT   91 (245)
T ss_pred             EEECCCCC
Confidence            99999964

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.18  E-value=1.1e-10  Score=72.86  Aligned_cols=78  Identities=10%  Similarity=0.196  Sum_probs=55.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-ccc---c-cccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSK---L-EIHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~---~-~~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      |++++++|+|++|++|+++++.|++.|++|+++.|++... .. ...   . .....+ .|+.+++++.+++.       
T Consensus         3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (248)
T PRK05557          3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG   82 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4557999999999999999999999999998888775431 00 000   0 011111 28888887766654       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+|||++|..
T Consensus        83 ~id~vi~~ag~~   94 (248)
T PRK05557         83 GVDILVNNAGIT   94 (248)
T ss_pred             CCCEEEECCCcC
Confidence            579999999864

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.18  E-value=8.5e-11  Score=73.34  Aligned_cols=78  Identities=10%  Similarity=0.181  Sum_probs=58.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc---cccccccccChHHHHHhh-------ccccE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE---IHKEFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~---~~~~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      +.+.++||||++.||.++++.|.++|++|.+..|+.+.++... ...   ......|++|.+++..++       .++|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            4468999999999999999999999999999999987663221 111   111122888887755443       57899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||+||...
T Consensus        85 LvNNAGl~~   93 (246)
T COG4221          85 LVNNAGLAL   93 (246)
T ss_pred             EEecCCCCc
Confidence            999999754

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.17  E-value=7.4e-10  Score=70.71  Aligned_cols=78  Identities=8%  Similarity=0.225  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--------ccc----cccccc-ccccChHHHHHhhc-
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--------SKL----EIHKEF-QELDEHEKIISILK-   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--------~~~----~~~~~~-~d~~~~~~~~~~~~-   70 (104)
                      +++++++|+||+|++|+++++.|+++|++|++++|+.+.....        ...    .....+ .|+.+++++.+++. 
T Consensus         4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   83 (273)
T PRK08278          4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK   83 (273)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            4557899999999999999999999999999999876432100        000    001111 38888887777654 


Q ss_pred             ------cccEEEEcccCc
Q 046878           71 ------EVGVVISTVAYP   82 (104)
Q Consensus        71 ------~~d~vv~~a~~~   82 (104)
                            ++|++||++|..
T Consensus        84 ~~~~~g~id~li~~ag~~  101 (273)
T PRK08278         84 AVERFGGIDICVNNASAI  101 (273)
T ss_pred             HHHHhCCCCEEEECCCCc
Confidence                  679999999974

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.17  E-value=9.5e-11  Score=73.51  Aligned_cols=77  Identities=13%  Similarity=0.191  Sum_probs=55.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc----cccc-cccccChHHHHHhh-------ccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE----IHKE-FQELDEHEKIISIL-------KEV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~----~~~~-~~d~~~~~~~~~~~-------~~~   72 (104)
                      ++.++++|+||+|++|++++++|+++|+.|++++|+.... ......    .... ..|+.+++++..++       .++
T Consensus         3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (248)
T TIGR01832         3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSE-TQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHI   81 (248)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHH-HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5668999999999999999999999999999998865211 001100    1111 12888888777554       358


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        82 d~li~~ag~~   91 (248)
T TIGR01832        82 DILVNNAGII   91 (248)
T ss_pred             CEEEECCCCC
Confidence            9999999874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.17  E-value=9.7e-11  Score=73.79  Aligned_cols=78  Identities=13%  Similarity=0.149  Sum_probs=57.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+|++|.+|.++++.|.+.|++|.+++|++++.+.. ...     .......|+.+++++.++++       .
T Consensus         4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (254)
T PRK07478          4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG   83 (254)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            4557899999999999999999999999999999986543211 010     00111128888887776654       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        84 id~li~~ag~~   94 (254)
T PRK07478         84 LDIAFNNAGTL   94 (254)
T ss_pred             CCEEEECCCCC
Confidence            79999999863

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.17  E-value=1.4e-10  Score=72.80  Aligned_cols=78  Identities=19%  Similarity=0.232  Sum_probs=54.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-cccc----ccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SKLE----IHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~~~----~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      |+.++++|+||+|++|+++++.|+++|++|.++ .|+.++.+.. ....    ....+ .|+.+++++.++++       
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            445789999999999999999999999987764 5554332110 0000    01111 38888888777764       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        82 ~id~vi~~ag~~   93 (250)
T PRK08063         82 RLDVFVNNAASG   93 (250)
T ss_pred             CCCEEEECCCCC
Confidence            479999999864

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.16  E-value=8.6e-11  Score=74.25  Aligned_cols=75  Identities=15%  Similarity=0.190  Sum_probs=55.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---cccc-cccccChHHHHHhhc-------cccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHKE-FQELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~~-~~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      ++++|+|++|++|+++++.|++.|++|++++|+++..... ....   .... ..|+.+++++.++++       .+|++
T Consensus         3 ~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~l   82 (257)
T PRK07024          3 LKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVV   82 (257)
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5899999999999999999999999999999886543211 0000   1111 128888888877654       37999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        83 v~~ag~~   89 (257)
T PRK07024         83 IANAGIS   89 (257)
T ss_pred             EECCCcC
Confidence            9999863

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.16  E-value=1.9e-10  Score=72.09  Aligned_cols=75  Identities=12%  Similarity=0.123  Sum_probs=52.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHhhc-----------cccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILK-----------EVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-----------~~d~v   75 (104)
                      ++++|+||+|++|+++++.|++.|++|.+++|+........ .........|+.+.+++.+.+.           ..|++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLL   81 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEE
Confidence            58999999999999999999999999999998764321000 0011111138888777766432           46899


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        82 v~~ag~~   88 (243)
T PRK07023         82 INNAGTV   88 (243)
T ss_pred             EEcCccc
Confidence            9999863

>PRK05717 oxidoreductase; Validated

Probab=99.16  E-value=1.1e-10  Score=73.57  Aligned_cols=78  Identities=9%  Similarity=0.099  Sum_probs=55.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc-cccc-cccccChHHHHHhh-------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE-IHKE-FQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~-~~~~-~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ++.++++|+|++|++|+++++.|+++|++|.+++|+..+.... .... .... ..|+.+.+++.+++       ..+|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4567899999999999999999999999999998875432111 0000 0111 13888877765544       34799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        88 li~~ag~~   95 (255)
T PRK05717         88 LVCNAAIA   95 (255)
T ss_pred             EEECCCcc
Confidence            99999964

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.16  E-value=2.1e-10  Score=72.91  Aligned_cols=75  Identities=9%  Similarity=0.152  Sum_probs=54.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----c--cccccccccccChHHHHHhhc-------cccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----K--LEIHKEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++++|+||+|++|+++++.|++.|++|.+++|+.+..+...    .  ........|+.+++++.+++.       ++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            37999999999999999999999999999998865432110    0  011111128888877776653       5899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        81 lI~~ag~~   88 (270)
T PRK05650         81 IVNNAGVA   88 (270)
T ss_pred             EEECCCCC
Confidence            99999974

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.16  E-value=2.8e-10  Score=72.88  Aligned_cols=91  Identities=15%  Similarity=0.255  Sum_probs=64.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcC--CCCcccccccccccc----cccccChHHHHHhhc--cccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARP--VTENSRTSKLEIHKE----FQELDEHEKIISILK--EVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~--~~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~--~~d~vv~   77 (104)
                      ++++|||+.||||++.++.++.+..  +|+.++.=  .............+.    ..|+.|.+.+.++++  .+|+|+|
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh   80 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH   80 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence            4799999999999999999998764  35555541  111111111111111    128999999999998  5899999


Q ss_pred             cccCcC---------------hhhHHHHHHHHHHhC
Q 046878           78 TVAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        78 ~a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      +|+.++               +.++.+|++++++..
T Consensus        81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~  116 (340)
T COG1088          81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW  116 (340)
T ss_pred             echhccccccccChhhhhhcchHHHHHHHHHHHHhc
Confidence            999876               457889999998765

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.16  E-value=3.1e-10  Score=71.20  Aligned_cols=75  Identities=20%  Similarity=0.291  Sum_probs=54.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-----c-cccc-cccccChHHHHHhhc-------cc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-----E-IHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-----~-~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      ++++|+||+|++|++++++|+++|++|.+++|++...+.... .     . .... ..|+.+++++.++++       ++
T Consensus         3 k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (248)
T PRK08251          3 QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGL   82 (248)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            589999999999999999999999999999998654321100 0     0 0111 128888877766543       68


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        83 d~vi~~ag~~   92 (248)
T PRK08251         83 DRVIVNAGIG   92 (248)
T ss_pred             CEEEECCCcC
Confidence            9999999864

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.15  E-value=8e-11  Score=74.35  Aligned_cols=87  Identities=17%  Similarity=0.280  Sum_probs=53.3

Q ss_pred             EEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccc------------------ccccccc-ccccC------hHH
Q 046878           12 IFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSK------------------LEIHKEF-QELDE------HEK   64 (104)
Q Consensus        12 i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~------------------~~~~~~~-~d~~~------~~~   64 (104)
                      +||||||+|++++++|++.+.  +|+++.|........+.                  ...+..+ .|+.+      ++.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            699999999999999998876  89999997643210000                  0111111 16655      346


Q ss_pred             HHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhC
Q 046878           65 IISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        65 ~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~   98 (104)
                      +..+.+++|+|||||+...            +.++.++++.|.+.+
T Consensus        81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~  126 (249)
T PF07993_consen   81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK  126 (249)
T ss_dssp             HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS
T ss_pred             hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc
Confidence            6677789999999999755            567889998887543

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.15  E-value=1.2e-10  Score=72.77  Aligned_cols=78  Identities=6%  Similarity=0.168  Sum_probs=56.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccccc-c---c-ccc-ccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRTSK-L---E-IHK-EFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~~~-~---~-~~~-~~~d~~~~~~~~~~~~-------   70 (104)
                      +++++++|+|++|++|+++++.|++.|++++++ .|++........ .   . ... ...|+.+++++.+.+.       
T Consensus         3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T PRK05565          3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG   82 (247)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            345689999999999999999999999999888 776543311100 0   0 011 1128888887777654       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+|||++|..
T Consensus        83 ~id~vi~~ag~~   94 (247)
T PRK05565         83 KIDILVNNAGIS   94 (247)
T ss_pred             CCCEEEECCCcC
Confidence            689999999875

>PRK06128 oxidoreductase; Provisional

Probab=99.15  E-value=3.7e-10  Score=73.00  Aligned_cols=78  Identities=13%  Similarity=0.146  Sum_probs=54.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc---cc-----ccccccccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS---KL-----EIHKEFQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~---~~-----~~~~~~~d~~~~~~~~~~~~------   70 (104)
                      +++++++|+||+|++|+++++.|++.|++|.+..++........   ..     .......|+.+++++.+++.      
T Consensus        53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  132 (300)
T PRK06128         53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL  132 (300)
T ss_pred             cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence            44578999999999999999999999999988776543211000   00     00111138888877766653      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||++|..
T Consensus       133 g~iD~lV~nAg~~  145 (300)
T PRK06128        133 GGLDILVNIAGKQ  145 (300)
T ss_pred             CCCCEEEECCccc
Confidence             579999999963

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.15  E-value=1e-10  Score=73.08  Aligned_cols=77  Identities=21%  Similarity=0.201  Sum_probs=56.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----ccc-cccccccChHHHHHhhc-------cc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIH-KEFQELDEHEKIISILK-------EV   72 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~-~~~~d~~~~~~~~~~~~-------~~   72 (104)
                      ++++++|+|++|.+|+.+++.|+++|++|++++|+++....... .    ... ....|+.+++++.++++       ++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            34689999999999999999999999999999998654311100 0    001 11138888887776654       47


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        85 d~lv~~ag~~   94 (241)
T PRK07454         85 DVLINNAGMA   94 (241)
T ss_pred             CEEEECCCcc
Confidence            9999999864

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.15  E-value=1e-10  Score=72.72  Aligned_cols=73  Identities=12%  Similarity=0.225  Sum_probs=54.1

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhc----cccEEEEcccC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILK----EVGVVISTVAY   81 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~----~~d~vv~~a~~   81 (104)
                      +++|+||+|.+|+++++.|.++|++|++++|+.++.... ..........|+.+++++.++++    .+|++||++|.
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~   79 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAP   79 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCc
Confidence            699999999999999999999999999999886543211 11111111138888888877764    58999999874

>PRK08017 oxidoreductase; Provisional

Probab=99.15  E-value=3.5e-10  Score=71.21  Aligned_cols=75  Identities=15%  Similarity=0.189  Sum_probs=53.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh--------ccccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL--------KEVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------~~~d~vv~~a   79 (104)
                      ++++|+||+|++|+++++.|.++|++|.+++|++++.+............|+.+.+++.+++        ..+|.++|++
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a   82 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence            57999999999999999999999999999999875542211111111113777777665544        2468999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      |..
T Consensus        83 g~~   85 (256)
T PRK08017         83 GFG   85 (256)
T ss_pred             CCC
Confidence            864

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.14  E-value=9.9e-11  Score=74.34  Aligned_cols=76  Identities=16%  Similarity=0.224  Sum_probs=55.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc----ccccc-ccccChHHHHHhhc-------cc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE----IHKEF-QELDEHEKIISILK-------EV   72 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~----~~~~~-~d~~~~~~~~~~~~-------~~   72 (104)
                      +.++++|+|++|.+|.+++++|+++|+.|++++|+++...... ...    ....+ .|+.+++++.+++.       ++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i   87 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI   87 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4579999999999999999999999999999998865431110 000    01111 28888887777654       46


Q ss_pred             cEEEEcccC
Q 046878           73 GVVISTVAY   81 (104)
Q Consensus        73 d~vv~~a~~   81 (104)
                      |++||++|.
T Consensus        88 D~vi~~ag~   96 (264)
T PRK07576         88 DVLVSGAAG   96 (264)
T ss_pred             CEEEECCCC
Confidence            999999974

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.14  E-value=1.2e-10  Score=73.32  Aligned_cols=78  Identities=17%  Similarity=0.288  Sum_probs=56.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~   71 (104)
                      ++.++++|+|++|.+|.++++.|++.|++|.+++|+.+..+.. ...     .......|+.+++++.+++       ..
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG   86 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4567899999999999999999999999999999876543211 000     1111113888888776665       36


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        87 id~lv~~ag~~   97 (253)
T PRK05867         87 IDIAVCNAGII   97 (253)
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.14  E-value=1.6e-10  Score=73.21  Aligned_cols=78  Identities=12%  Similarity=0.128  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc-ccccc-ccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE-IHKEF-QELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~-~~~~~-~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++|+||+|++|+++++.|+++|++|++++|+.+..+.... .. ....+ .|+.+++++.++++       .+|+
T Consensus         4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   83 (263)
T PRK06200          4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC   83 (263)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            456799999999999999999999999999999998654321110 00 01111 27888777766553       5799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        84 li~~ag~~   91 (263)
T PRK06200         84 FVGNAGIW   91 (263)
T ss_pred             EEECCCCc
Confidence            99999963

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=99.14  E-value=1.5e-10  Score=77.21  Aligned_cols=85  Identities=20%  Similarity=0.264  Sum_probs=62.5

Q ss_pred             EEEEccCChhhHHHHHHHHhCC-C-eEEEEEcCCCCcccccc---cccccc-cccccChHHHHHhhccccEEEEcccCcC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSG-H-NTFVYARPVTENSRTSK---LEIHKE-FQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~-~-~v~~~~r~~~~~~~~~~---~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      |+|+|+ |++|+.+++.|.+.+ . ++++.+|+.++.+....   ...... ..|..|.+++.++++++|+|+||+|+. 
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~-   78 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF-   78 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG-
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccc-
Confidence            789999 999999999999886 3 79999999876422111   111111 128999999999999999999999987 


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                        ....++++|.+.+
T Consensus        79 --~~~~v~~~~i~~g   91 (386)
T PF03435_consen   79 --FGEPVARACIEAG   91 (386)
T ss_dssp             --GHHHHHHHHHHHT
T ss_pred             --hhHHHHHHHHHhC
Confidence              4578999999887

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.13  E-value=2e-10  Score=72.31  Aligned_cols=78  Identities=8%  Similarity=0.175  Sum_probs=56.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc--cc-cccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE--IH-KEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~--~~-~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++|+||+|++|.++++.|+++|+.|.+++|+...........  .. ....|+.+++++.+++.       +.|+
T Consensus        13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            45578999999999999999999999999999998764321110000  01 11138888887766653       5799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        93 vi~~ag~~  100 (255)
T PRK06841         93 LVNSAGVA  100 (255)
T ss_pred             EEECCCCC
Confidence            99999974

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.13  E-value=1.7e-10  Score=73.68  Aligned_cols=82  Identities=13%  Similarity=0.158  Sum_probs=58.8

Q ss_pred             CCCCCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----cc-cccccccccChHHHHHhh----
Q 046878            1 MEGENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSK----LE-IHKEFQELDEHEKIISIL----   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~~-~~~~~~d~~~~~~~~~~~----   69 (104)
                      |+..|+.++++||||++  .||+++++.|+++|++|.+.+|+....+....    .. ......|+.|++++.+++    
T Consensus         1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~   80 (271)
T PRK06505          1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALE   80 (271)
T ss_pred             CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHH
Confidence            77888888999999986  89999999999999999988876422111000    01 011113888888776664    


Q ss_pred             ---ccccEEEEcccCc
Q 046878           70 ---KEVGVVISTVAYP   82 (104)
Q Consensus        70 ---~~~d~vv~~a~~~   82 (104)
                         ..+|++||++|..
T Consensus        81 ~~~g~iD~lVnnAG~~   96 (271)
T PRK06505         81 KKWGKLDFVVHAIGFS   96 (271)
T ss_pred             HHhCCCCEEEECCccC
Confidence               3579999999864

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.13  E-value=5.4e-10  Score=70.60  Aligned_cols=77  Identities=13%  Similarity=0.194  Sum_probs=55.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----cccccc-ccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIHKEF-QELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~~~~-~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+||+|.+|.++++.|++.|+.|.++.|+. ..+.... .    .....+ .|+.+++++.++++       .
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999998873 2211100 0    011111 28888887777664       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        92 id~li~~ag~~  102 (258)
T PRK06935         92 IDILVNNAGTI  102 (258)
T ss_pred             CCEEEECCCCC
Confidence            79999999864

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.13  E-value=5.2e-10  Score=67.07  Aligned_cols=97  Identities=14%  Similarity=0.197  Sum_probs=73.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccc-cccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLE-IHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      |+++..+|+||||-.|..+++++++++.  .|+++.|+....  +.... ..+...|....+.+...++++|+.|.|.|.
T Consensus        16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d--~at~k~v~q~~vDf~Kl~~~a~~~qg~dV~FcaLgT   93 (238)
T KOG4039|consen   16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPD--PATDKVVAQVEVDFSKLSQLATNEQGPDVLFCALGT   93 (238)
T ss_pred             hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCC--ccccceeeeEEechHHHHHHHhhhcCCceEEEeecc
Confidence            6778999999999999999999999883  799999885332  22111 222223677777888888999999999998


Q ss_pred             cC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           82 PQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        82 ~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +.            .+....+++++++.+ ++.|+
T Consensus        94 TRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fv  127 (238)
T KOG4039|consen   94 TRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFV  127 (238)
T ss_pred             cccccccCceEeechHHHHHHHHHHHhCC-CeEEE
Confidence            65            355678888888887 77763

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.13  E-value=4.7e-10  Score=70.28  Aligned_cols=78  Identities=10%  Similarity=0.235  Sum_probs=52.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC-CCCccc-ccc-----cccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP-VTENSR-TSK-----LEIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~-~~~~~~-~~~-----~~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      |+.+.++|+|++|++|+++++.|+++|+.+++..++ ...... ...     ........|+.|.+++.++++       
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            345789999999999999999999999988775443 221100 000     011111137888777766653       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||++|..
T Consensus        81 ~id~li~~ag~~   92 (246)
T PRK12938         81 EIDVLVNNAGIT   92 (246)
T ss_pred             CCCEEEECCCCC
Confidence            579999999974

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.12  E-value=1.9e-10  Score=72.51  Aligned_cols=75  Identities=13%  Similarity=0.233  Sum_probs=55.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc--ccccc-cccccChHHHHHhhc-------cccEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL--EIHKE-FQELDEHEKIISILK-------EVGVVI   76 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~--~~~~~-~~d~~~~~~~~~~~~-------~~d~vv   76 (104)
                      ++++|+||+|++|+++++.|+++|++|.+++|++...+... ..  ..... ..|+.+++++.+++.       ++|+||
T Consensus         3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (257)
T PRK07074          3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVLV   82 (257)
T ss_pred             CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            58999999999999999999999999999998865431110 00  01111 138888888877664       479999


Q ss_pred             EcccCc
Q 046878           77 STVAYP   82 (104)
Q Consensus        77 ~~a~~~   82 (104)
                      |++|..
T Consensus        83 ~~ag~~   88 (257)
T PRK07074         83 ANAGAA   88 (257)
T ss_pred             ECCCCC
Confidence            999864

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.12  E-value=4.2e-10  Score=70.94  Aligned_cols=78  Identities=14%  Similarity=0.228  Sum_probs=56.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---c-cccc-cccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---E-IHKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~-~~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+|++|++|+++++.|+++|+.|++++|+++..... ...   . .... ..|+.+++++.++++       .
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            5668999999999999999999999999999999986443110 000   0 0111 128888887776654       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      .|++||++|..
T Consensus        89 id~vi~~ag~~   99 (256)
T PRK06124         89 LDILVNNVGAR   99 (256)
T ss_pred             CCEEEECCCCC
Confidence            69999999964

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.12  E-value=1.4e-10  Score=73.47  Aligned_cols=81  Identities=27%  Similarity=0.271  Sum_probs=56.1

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-cccc-----cccc-cccccChHHHHHhhc--
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKLE-----IHKE-FQELDEHEKIISILK--   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~~-----~~~~-~~d~~~~~~~~~~~~--   70 (104)
                      |...|+.++++|+||++.||+++++.|++.|+.|.++.|+... .+.. ....     .... ..|+.|++++.+++.  
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4455777899999999999999999999999998887664322 1100 0000     0111 128888887766653  


Q ss_pred             -----cccEEEEcccC
Q 046878           71 -----EVGVVISTVAY   81 (104)
Q Consensus        71 -----~~d~vv~~a~~   81 (104)
                           .+|++||++|.
T Consensus        82 ~~~~g~id~lv~nAg~   97 (260)
T PRK08416         82 DEDFDRVDFFISNAII   97 (260)
T ss_pred             HHhcCCccEEEECccc
Confidence                 57999999974

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.12  E-value=5.4e-10  Score=70.54  Aligned_cols=75  Identities=11%  Similarity=0.286  Sum_probs=54.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------cccccc-ccccChHHHHHhhc-------cc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKEF-QELDEHEKIISILK-------EV   72 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~~-~d~~~~~~~~~~~~-------~~   72 (104)
                      ++++|+|++|++|+++++.|++.|++|.+++|+....... ...      .....+ .|+.+++++.+++.       .+
T Consensus         3 k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   82 (259)
T PRK12384          3 QVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRV   82 (259)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999876543111 110      001111 28888777766553       57


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        83 d~vv~~ag~~   92 (259)
T PRK12384         83 DLLVYNAGIA   92 (259)
T ss_pred             CEEEECCCcC
Confidence            9999999864

>PRK08643 acetoin reductase; Validated

Probab=99.11  E-value=2.4e-10  Score=72.06  Aligned_cols=75  Identities=13%  Similarity=0.253  Sum_probs=55.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc----ccccc-ccccChHHHHHhhc-------cccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE----IHKEF-QELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~----~~~~~-~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++++|+|++|++|.++++.|+++|++|++++|+.+...... ...    ....+ .|+.+++++.++++       ++|+
T Consensus         3 k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   82 (256)
T PRK08643          3 KVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNV   82 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            58999999999999999999999999999998865431110 000    01111 38888887776654       5799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        83 vi~~ag~~   90 (256)
T PRK08643         83 VVNNAGVA   90 (256)
T ss_pred             EEECCCCC
Confidence            99999864

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.11  E-value=5.8e-10  Score=70.75  Aligned_cols=79  Identities=11%  Similarity=0.133  Sum_probs=57.7

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      .++.++++|+|++|.+|.+++++|+++|++|+++.|++....... ..     +......|+.+++++.+++.       
T Consensus         7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (265)
T PRK07097          7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG   86 (265)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            355678999999999999999999999999999888765432110 00     11111138888888777663       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        87 ~id~li~~ag~~   98 (265)
T PRK07097         87 VIDILVNNAGII   98 (265)
T ss_pred             CCCEEEECCCCC
Confidence            479999999974

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.11  E-value=3.4e-10  Score=70.64  Aligned_cols=75  Identities=13%  Similarity=0.139  Sum_probs=53.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccChHHHHHhh-------ccccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKIISIL-------KEVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv~~a   79 (104)
                      ++++|+|++|.+|+++++.|.++|++|++++|+++.... ...........|+.+++++.+.+       ..+|++||++
T Consensus         3 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~a   82 (236)
T PRK06483          3 APILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNA   82 (236)
T ss_pred             ceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECC
Confidence            589999999999999999999999999999988643211 00011011112788877766654       3479999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      |..
T Consensus        83 g~~   85 (236)
T PRK06483         83 SDW   85 (236)
T ss_pred             ccc
Confidence            863

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.11  E-value=2.2e-10  Score=72.21  Aligned_cols=78  Identities=14%  Similarity=0.224  Sum_probs=56.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +..++++|+||+|.+|+++++.|++.|++|++++|++...+.. ...     .......|+.+++++.+++.       .
T Consensus         7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   86 (254)
T PRK08085          7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP   86 (254)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            3567899999999999999999999999999999886543211 000     11111138888887777653       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      .|++||++|..
T Consensus        87 id~vi~~ag~~   97 (254)
T PRK08085         87 IDVLINNAGIQ   97 (254)
T ss_pred             CCEEEECCCcC
Confidence            79999999864

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.11  E-value=2.3e-10  Score=71.71  Aligned_cols=76  Identities=20%  Similarity=0.250  Sum_probs=55.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccccc-ccccChHHHHHhhc----cccEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEF-QELDEHEKIISILK----EVGVV   75 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~-~d~~~~~~~~~~~~----~~d~v   75 (104)
                      |++++|+||+|++|.++++.|+++|++|.+++|+++..+.. ...     .....+ .|+.+++.+.+.+.    ..|++
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v   80 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV   80 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence            35899999999999999999999999999999987543211 000     011111 28888887777664    46999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        81 v~~ag~~   87 (243)
T PRK07102         81 LIAVGTL   87 (243)
T ss_pred             EECCcCC
Confidence            9999863

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.10  E-value=2.5e-10  Score=72.00  Aligned_cols=78  Identities=15%  Similarity=0.161  Sum_probs=55.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--cccccc-ccccc-ccccChHHHHHhhc-------ccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKLE-IHKEF-QELDEHEKIISILK-------EVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~~-~~~~~-~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++.++++|+||++.||+++++.|+++|++|++++|+.....  ...... ....+ .|+.+++++.++++       ..|
T Consensus         6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD   85 (251)
T PRK12481          6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID   85 (251)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence            45678999999999999999999999999998887642210  000000 01111 28888887777653       579


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        86 ~lv~~ag~~   94 (251)
T PRK12481         86 ILINNAGII   94 (251)
T ss_pred             EEEECCCcC
Confidence            999999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.10  E-value=3.2e-10  Score=71.39  Aligned_cols=75  Identities=16%  Similarity=0.250  Sum_probs=53.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc---c-cccc-cccccChHHHHHhhc-------ccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL---E-IHKE-FQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~---~-~~~~-~~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++++|+|++|++|+++++.|+++|++|.+++|+.... .. ....   . .... ..|+.+++++.+++.       .+|
T Consensus         3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   82 (256)
T PRK12745          3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID   82 (256)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999999998875321 00 0000   0 0111 128888877766553       579


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        83 ~vi~~ag~~   91 (256)
T PRK12745         83 CLVNNAGVG   91 (256)
T ss_pred             EEEECCccC
Confidence            999999863

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.10  E-value=3.3e-10  Score=71.13  Aligned_cols=77  Identities=13%  Similarity=0.185  Sum_probs=52.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      +++++++|+||+|++|++++++|+++|+++++..|+.... ... ...     .......|+.+++++.++++       
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG   83 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence            3457999999999999999999999999987766543221 000 000     00011127888777666653       


Q ss_pred             cccEEEEcccC
Q 046878           71 EVGVVISTVAY   81 (104)
Q Consensus        71 ~~d~vv~~a~~   81 (104)
                      ++|+|||++|.
T Consensus        84 ~~d~vi~~ag~   94 (252)
T PRK06077         84 VADILVNNAGL   94 (252)
T ss_pred             CCCEEEECCCC
Confidence            57999999996

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.09  E-value=2.4e-10  Score=71.99  Aligned_cols=78  Identities=12%  Similarity=0.204  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+|++|++|+++++.|.+.|++|+++.|+++..+... ..     .......|+.+++++.+.++       .
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            55689999999999999999999999999999999865432110 00     00011127888887777664       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        87 ~d~li~~ag~~   97 (258)
T PRK06949         87 IDILVNNSGVS   97 (258)
T ss_pred             CCEEEECCCCC
Confidence            79999999963

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.09  E-value=3.5e-10  Score=71.59  Aligned_cols=82  Identities=15%  Similarity=0.229  Sum_probs=58.6

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc-----ccccccccccChHHHHHhhc---
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL-----EIHKEFQELDEHEKIISILK---   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~-----~~~~~~~d~~~~~~~~~~~~---   70 (104)
                      |...++.++++|+||+|.+|.++++.|++.|+.+.+..|+.... .. ....     .......|+.+++++.+++.   
T Consensus         1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            66778888999999999999999999999999988887754321 00 0000     00111128888887766553   


Q ss_pred             ----cccEEEEcccCc
Q 046878           71 ----EVGVVISTVAYP   82 (104)
Q Consensus        71 ----~~d~vv~~a~~~   82 (104)
                          .+|++||++|..
T Consensus        81 ~~~g~id~lv~~ag~~   96 (261)
T PRK08936         81 KEFGTLDVMINNAGIE   96 (261)
T ss_pred             HHcCCCCEEEECCCCC
Confidence                579999999974

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.09  E-value=3.2e-10  Score=71.70  Aligned_cols=78  Identities=12%  Similarity=0.183  Sum_probs=56.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~-------~~   72 (104)
                      |+.++++|+|++|++|+++++.|+++|++|++++|+..........     .......|+.+++++.+++.       ..
T Consensus         4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   83 (263)
T PRK08226          4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI   83 (263)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4557999999999999999999999999999999875321100000     11111138888887777654       57


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        84 d~vi~~ag~~   93 (263)
T PRK08226         84 DILVNNAGVC   93 (263)
T ss_pred             CEEEECCCcC
Confidence            9999999963

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.09  E-value=3.2e-10  Score=71.18  Aligned_cols=76  Identities=14%  Similarity=0.276  Sum_probs=52.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-ccc-cccc-ccccccChHHHHHhhcc--------cc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKL-EIHK-EFQELDEHEKIISILKE--------VG   73 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~-~~~~-~~~d~~~~~~~~~~~~~--------~d   73 (104)
                      +.++++|+||+|++|+++++.|++.|++|.+..++... .+.. ... .... ...|+.+++++.+++..        +|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            44689999999999999999999999998876654322 1100 000 0111 11288888877776642        89


Q ss_pred             EEEEcccC
Q 046878           74 VVISTVAY   81 (104)
Q Consensus        74 ~vv~~a~~   81 (104)
                      ++||++|.
T Consensus        84 ~li~~ag~   91 (253)
T PRK08642         84 TVVNNALA   91 (253)
T ss_pred             EEEECCCc
Confidence            99999975

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.09  E-value=2.6e-10  Score=72.13  Aligned_cols=76  Identities=12%  Similarity=0.202  Sum_probs=55.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc---c-cc-cccccccChHHHHHhhc-------cccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL---E-IH-KEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~---~-~~-~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++++|+|++|++|.++++.|++.|++|++++|++...+... ..   . .. ....|+.+++++..++.       +.|+
T Consensus         2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   81 (263)
T PRK06181          2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI   81 (263)
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            57999999999999999999999999999998864431100 00   0 01 11128888888777654       5799


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      |||++|...
T Consensus        82 vi~~ag~~~   90 (263)
T PRK06181         82 LVNNAGITM   90 (263)
T ss_pred             EEECCCccc
Confidence            999998643

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.09  E-value=3.1e-10  Score=73.86  Aligned_cols=78  Identities=9%  Similarity=0.149  Sum_probs=56.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------cccccc-ccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKEF-QELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~~-~d~~~~~~~~~~~~------   70 (104)
                      ++.++++||||+++||.++++.|+++|++|++++|+.++.+.. ...      .....+ .|+.+.+++.+++.      
T Consensus        12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~   91 (313)
T PRK05854         12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG   91 (313)
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            5568999999999999999999999999999999986543111 000      001111 28888887766643      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       .+|++||+||..
T Consensus        92 ~~iD~li~nAG~~  104 (313)
T PRK05854         92 RPIHLLINNAGVM  104 (313)
T ss_pred             CCccEEEECCccc
Confidence             479999999864

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.09  E-value=8.2e-10  Score=68.75  Aligned_cols=74  Identities=14%  Similarity=0.214  Sum_probs=53.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccCh-HHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEH-EKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++.++++|+|++|++|+++++.|+++|++|.+++|++... ......  ....|+.++ +.+.+.+..+|++||++|.
T Consensus         3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~--~~~~D~~~~~~~~~~~~~~id~lv~~ag~   77 (235)
T PRK06550          3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-LSGNFH--FLQLDLSDDLEPLFDWVPSVDILCNTAGI   77 (235)
T ss_pred             CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-cCCcEE--EEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence            4557899999999999999999999999999998876432 111111  111266665 4455556678999999985

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.08  E-value=8.7e-10  Score=69.59  Aligned_cols=79  Identities=15%  Similarity=0.224  Sum_probs=56.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCcccc-ccc---c-ccc-ccccccChHHHHHhhc------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRT-SKL---E-IHK-EFQELDEHEKIISILK------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~-~~~---~-~~~-~~~d~~~~~~~~~~~~------   70 (104)
                      .++.++++|+|++|.+|..+++.|.+.|++ |++++|+++..... ...   . ... ...|+.+++++.+++.      
T Consensus         3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (260)
T PRK06198          3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAF   82 (260)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            356679999999999999999999999998 88988876443110 000   0 011 1138888887777653      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||++|..
T Consensus        83 g~id~li~~ag~~   95 (260)
T PRK06198         83 GRLDALVNAAGLT   95 (260)
T ss_pred             CCCCEEEECCCcC
Confidence             579999999864

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.08  E-value=3.7e-10  Score=72.06  Aligned_cols=78  Identities=17%  Similarity=0.208  Sum_probs=56.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +++++++|+||+|++|+++++.|+++|+.|.++.|+.+..... ...     .......|+.+++++.++++       .
T Consensus         8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   87 (274)
T PRK07775          8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE   87 (274)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            3446899999999999999999999999999888875432111 000     00011128888888877664       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        88 id~vi~~Ag~~   98 (274)
T PRK07775         88 IEVLVSGAGDT   98 (274)
T ss_pred             CCEEEECCCcC
Confidence            79999999874

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.08  E-value=6e-10  Score=70.44  Aligned_cols=82  Identities=15%  Similarity=0.165  Sum_probs=59.1

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-----cccc-cccccChHHHHHhh---c
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-----IHKE-FQELDEHEKIISIL---K   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-----~~~~-~~d~~~~~~~~~~~---~   70 (104)
                      |...++.++++|+|++|.+|+++++.|+++|++|.+++|++++.+... ...     .... ..|+.+++++.+++   .
T Consensus         1 ~~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g   80 (259)
T PRK06125          1 MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG   80 (259)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC
Confidence            444566789999999999999999999999999999999865432110 000     0111 12788888776665   4


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        81 ~id~lv~~ag~~   92 (259)
T PRK06125         81 DIDILVNNAGAI   92 (259)
T ss_pred             CCCEEEECCCCC
Confidence            689999999864

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.07  E-value=5.6e-10  Score=70.42  Aligned_cols=78  Identities=5%  Similarity=0.181  Sum_probs=56.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-ccccc----ccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKLE----IHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~~----~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++|+|++|.+|+++++.|.+.|++|.+++|+.+.. +. .....    ....+ .|+.+++++.+++.       
T Consensus         6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g   85 (254)
T PRK06114          6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG   85 (254)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5567999999999999999999999999999999875431 10 00010    01111 28888887776654       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ..|++||++|..
T Consensus        86 ~id~li~~ag~~   97 (254)
T PRK06114         86 ALTLAVNAAGIA   97 (254)
T ss_pred             CCCEEEECCCCC
Confidence            469999999974

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.07  E-value=3.4e-10  Score=70.90  Aligned_cols=74  Identities=15%  Similarity=0.120  Sum_probs=54.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccc-cccccChHHHHHhhcc----ccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKE-FQELDEHEKIISILKE----VGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~-~~d~~~~~~~~~~~~~----~d~vv~~a~~   81 (104)
                      ++++|+||+|++|.++++.|+++|++|.+++|+++..+.... ...... ..|+.+++++.++++.    .|.++|++|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag~   81 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAGD   81 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCcc
Confidence            579999999999999999999999999999998654321111 011111 1388899988888764    5888898875

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.07  E-value=4.3e-10  Score=71.76  Aligned_cols=77  Identities=17%  Similarity=0.203  Sum_probs=55.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~   71 (104)
                      ++.++++|+|++|.+|+++++.|+++|++|.+++|+.+..+.. ...     .......|+.+++++..++       ..
T Consensus         8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   87 (278)
T PRK08277          8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP   87 (278)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4557899999999999999999999999999999876433111 000     0011113788877766654       36


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|++||++|.
T Consensus        88 id~li~~ag~   97 (278)
T PRK08277         88 CDILINGAGG   97 (278)
T ss_pred             CCEEEECCCC
Confidence            8999999985

>PRK08589 short chain dehydrogenase; Validated

Probab=99.07  E-value=3.7e-10  Score=72.03  Aligned_cols=77  Identities=12%  Similarity=0.166  Sum_probs=55.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +++++++|+||+|.+|+++++.|+++|++|++++|+ +.... ....     .......|+.+++++..++.       .
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            566799999999999999999999999999999988 33211 1111     01111128888877766553       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        83 id~li~~Ag~~   93 (272)
T PRK08589         83 VDVLFNNAGVD   93 (272)
T ss_pred             cCEEEECCCCC
Confidence            79999999864

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=99.07  E-value=1.7e-09  Score=68.70  Aligned_cols=90  Identities=12%  Similarity=0.128  Sum_probs=70.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcChh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQLL   85 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~~~   85 (104)
                      |+|+|+||||. |+.+++.|.+.|++|.+..+++...+............+..+.+++.+.+.  ++|+||+++-+....
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPfA~~   79 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALDPQELREFLKRHSIDILVDATHPFAAQ   79 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCCHHHHHHHHHhcCCCEEEEcCCHHHHH
Confidence            47999999999 999999999999999999888755422222211222235567778888875  489999999998878


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                      -+.+..++|.+.+
T Consensus        80 is~~a~~a~~~~~   92 (256)
T TIGR00715        80 ITTNATAVCKELG   92 (256)
T ss_pred             HHHHHHHHHHHhC
Confidence            8899999999887

This enzyme was found to be a monomer by gel filtration.

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.07  E-value=5.2e-10  Score=69.30  Aligned_cols=75  Identities=12%  Similarity=0.195  Sum_probs=54.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh---c--cccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL---K--EVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~--~~d~vv~~a~~~   82 (104)
                      ++++|+|++|.+|++++++|++.|++|.+++|+++..+............|+.+.+.+.+++   .  .+|++||++|..
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~~   81 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGVY   81 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCcc
Confidence            58999999999999999999999999999998865432111111111123788887776653   2  479999999875

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.07  E-value=5.9e-10  Score=70.35  Aligned_cols=78  Identities=12%  Similarity=0.137  Sum_probs=54.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--cccccc-cccc-cccccChHHHHHhhc-------ccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKLE-IHKE-FQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~~-~~~~-~~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++.++++|+|++|.+|+++++.|.+.|++|.+++++.....  ...... .... ..|+.+.+++.++++       ++|
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D   87 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID   87 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            56679999999999999999999999999988776542210  000000 0111 128888877777654       589


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        88 ~li~~Ag~~   96 (253)
T PRK08993         88 ILVNNAGLI   96 (253)
T ss_pred             EEEECCCCC
Confidence            999999974

>PRK07069 short chain dehydrogenase; Validated

Probab=99.07  E-value=8.6e-10  Score=69.18  Aligned_cols=75  Identities=13%  Similarity=0.308  Sum_probs=52.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcC-CCCcccc-cccc------c-ccccccccChHHHHHhhc-------cc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARP-VTENSRT-SKLE------I-HKEFQELDEHEKIISILK-------EV   72 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~-~~~~~~~-~~~~------~-~~~~~d~~~~~~~~~~~~-------~~   72 (104)
                      +++|+|++|++|.++++.|+++|++|++++|+ .+..+.. ....      . .....|+.+++++.+++.       ++
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL   80 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            48999999999999999999999999999987 3322110 0000      0 001127888887766653       57


Q ss_pred             cEEEEcccCcC
Q 046878           73 GVVISTVAYPQ   83 (104)
Q Consensus        73 d~vv~~a~~~~   83 (104)
                      |++||++|...
T Consensus        81 d~vi~~ag~~~   91 (251)
T PRK07069         81 SVLVNNAGVGS   91 (251)
T ss_pred             cEEEECCCcCC
Confidence            99999998653

>PRK12742 oxidoreductase; Provisional

Probab=99.06  E-value=5.7e-10  Score=69.50  Aligned_cols=78  Identities=15%  Similarity=0.299  Sum_probs=53.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-cccccccccccccChHHHHHhhc---cccEEEEcc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKLEIHKEFQELDEHEKIISILK---EVGVVISTV   79 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a   79 (104)
                      ++.++++|+||+|.+|+++++.|.++|++|.+..++... .+.. ..........|+.+.+++.+.+.   .+|++||++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~a   83 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNA   83 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECC
Confidence            556799999999999999999999999998877664322 1110 01111111137778777766654   489999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      |..
T Consensus        84 g~~   86 (237)
T PRK12742         84 GIA   86 (237)
T ss_pred             CCC
Confidence            874

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.06  E-value=2.4e-09  Score=70.02  Aligned_cols=100  Identities=13%  Similarity=0.136  Sum_probs=66.3

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccc--ccccccccccccChHHHHHhhccccEEEEcc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTS--KLEIHKEFQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      ..+|+||.|+|++|.+|+.++..|...+  .++.++++........+  +......+.+..|++++.+.++++|+||+++
T Consensus         5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~~~~v~~~td~~~~~~~l~gaDvVVita   84 (321)
T PTZ00325          5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDTPAKVTGYADGELWEKALRGADLVLICA   84 (321)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCcCceEEEecCCCchHHHhCCCCEEEECC
Confidence            3567799999988999999999998655  57888888322211111  0000111224555555678899999999999


Q ss_pred             cCcCh-------------hhHHHHHHHHHHhCCcccCC
Q 046878           80 AYPQL-------------LDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        80 ~~~~~-------------~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |.+..             ....++++++.+.+ ++++|
T Consensus        85 G~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iv  121 (321)
T PTZ00325         85 GVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIV  121 (321)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEE
Confidence            98541             23456777777776 66653

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.06  E-value=1.7e-09  Score=67.51  Aligned_cols=75  Identities=9%  Similarity=0.140  Sum_probs=53.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc----cccccc-ccccChHHHHHhhc-------ccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL----EIHKEF-QELDEHEKIISILK-------EVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~----~~~~~~-~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++++|+|++|++|+++++.|.++|+.|+++.|++... +.. ...    .....+ .|+.+.+++.+++.       ++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5899999999999999999999999999998885311 000 000    001111 28888887777654       479


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        83 ~vi~~ag~~   91 (245)
T PRK12824         83 ILVNNAGIT   91 (245)
T ss_pred             EEEECCCCC
Confidence            999999864

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.06  E-value=6.9e-10  Score=72.01  Aligned_cols=82  Identities=9%  Similarity=0.114  Sum_probs=57.1

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc-----ccccccccccChHHHHHhhc---
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL-----EIHKEFQELDEHEKIISILK---   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~-----~~~~~~~d~~~~~~~~~~~~---   70 (104)
                      |...++.++++|+|++|++|.++++.|+++|+.|++.+++.... +. ....     .......|+.+.+++.++++   
T Consensus         6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~   85 (306)
T PRK07792          6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAV   85 (306)
T ss_pred             CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence            34456678999999999999999999999999998887754321 10 0000     00111128888777766653   


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|++||++|..
T Consensus        86 ~~g~iD~li~nAG~~  100 (306)
T PRK07792         86 GLGGLDIVVNNAGIT  100 (306)
T ss_pred             HhCCCCEEEECCCCC
Confidence               589999999974

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.06  E-value=5.5e-10  Score=69.82  Aligned_cols=77  Identities=6%  Similarity=0.146  Sum_probs=54.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc----cccc--ccccccccccChHHHHHhhc-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR----TSKL--EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~----~~~~--~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +.++++|+|++|++|+++++.|.++|++++++.++.+.. ..    ....  .......|+.+++++.++++       +
T Consensus         4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (245)
T PRK12937          4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR   83 (245)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999988777654321 00    0000  00111128888888777765       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        84 id~vi~~ag~~   94 (245)
T PRK12937         84 IDVLVNNAGVM   94 (245)
T ss_pred             CCEEEECCCCC
Confidence            89999999964

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.05  E-value=5.5e-10  Score=70.45  Aligned_cols=78  Identities=9%  Similarity=0.142  Sum_probs=56.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +++++++|+|++|++|.++++.|.++|+++++++|+.+..+... ..     .......|+.+.+++.+++.       +
T Consensus         9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   88 (255)
T PRK06113          9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK   88 (255)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999888764432110 00     00011138888887766543       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      .|++||++|..
T Consensus        89 ~d~li~~ag~~   99 (255)
T PRK06113         89 VDILVNNAGGG   99 (255)
T ss_pred             CCEEEECCCCC
Confidence            79999999863

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.05  E-value=5.1e-10  Score=70.80  Aligned_cols=75  Identities=7%  Similarity=0.160  Sum_probs=54.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc---cccccc-cccccChHHHHHhh-------ccccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK---LEIHKE-FQELDEHEKIISIL-------KEVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~---~~~~~~-~~d~~~~~~~~~~~-------~~~d~v   75 (104)
                      |+++|+|++|.+|+++++.|+++|+.|.+++|+++..+.. ..   ...... ..|+.|++++.+++       .++|++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4799999999999999999999999999999886543111 00   011111 12888888777665       358999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        81 i~naG~~   87 (259)
T PRK08340         81 VWNAGNV   87 (259)
T ss_pred             EECCCCC
Confidence            9999863

>PRK12743 oxidoreductase; Provisional

Probab=99.04  E-value=2.1e-09  Score=67.85  Aligned_cols=76  Identities=11%  Similarity=0.082  Sum_probs=52.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc---c-cccc-cccccChHHHHHhhc-------cc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL---E-IHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~---~-~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      +++++|+||+|.+|+++++.|++.|+.|.++.+++... +.. ...   . .... ..|+.+++++.+++.       .+
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            35899999999999999999999999998876654321 110 000   0 0111 138888777666553       57


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        82 d~li~~ag~~   91 (256)
T PRK12743         82 DVLVNNAGAM   91 (256)
T ss_pred             CEEEECCCCC
Confidence            9999999864

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.04  E-value=7e-10  Score=69.79  Aligned_cols=77  Identities=16%  Similarity=0.242  Sum_probs=54.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccccc-ccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKEF-QELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~~-~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+||+|++|.++++.|.+.|++|++++|+....+.. ....    ....+ .|+.+.+++.++++       .
T Consensus         6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK07035          6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR   85 (252)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5567899999999999999999999999999999876433111 0000    01111 27777776665543       5


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|++||++|.
T Consensus        86 id~li~~ag~   95 (252)
T PRK07035         86 LDILVNNAAA   95 (252)
T ss_pred             CCEEEECCCc
Confidence            7999999985

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.03  E-value=7.7e-10  Score=69.36  Aligned_cols=78  Identities=12%  Similarity=0.172  Sum_probs=54.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC-CCcccc-cc---cc-ccccc-ccccChHHHHHhhcc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV-TENSRT-SK---LE-IHKEF-QELDEHEKIISILKE------   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~-~~~~~~-~~---~~-~~~~~-~d~~~~~~~~~~~~~------   71 (104)
                      ++.++++|+|++|++|+++++.|+++|+.+.+..++. ...+.. ..   .. ....+ .|+.+++++.++++.      
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4557999999999999999999999999987765443 221100 00   00 01111 288888888777654      


Q ss_pred             -ccEEEEcccCc
Q 046878           72 -VGVVISTVAYP   82 (104)
Q Consensus        72 -~d~vv~~a~~~   82 (104)
                       +|+|||++|..
T Consensus        84 ~id~vi~~ag~~   95 (247)
T PRK12935         84 KVDILVNNAGIT   95 (247)
T ss_pred             CCCEEEECCCCC
Confidence             79999999874

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.03  E-value=9.3e-10  Score=70.91  Aligned_cols=78  Identities=12%  Similarity=0.176  Sum_probs=55.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++|+||+|++|.++++.|+++|++|.+++|+.... +.. ...     .......|+.+.+++.+++.       
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4457899999999999999999999999999988875321 000 000     00011128888887777654       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus       124 ~iD~lI~~Ag~~  135 (290)
T PRK06701        124 RLDILVNNAAFQ  135 (290)
T ss_pred             CCCEEEECCccc
Confidence            579999999863

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.03  E-value=6.5e-10  Score=67.99  Aligned_cols=79  Identities=20%  Similarity=0.342  Sum_probs=58.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--cccccccccccccChHHHHHhh-------ccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--SKLEIHKEFQELDEHEKIISIL-------KEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~-------~~~d~v   75 (104)
                      ++..+|+|+|++..||.++++.+.+.|.+|.+.+|+.+.....  ..........|+.|.++..+.+       ...+++
T Consensus         3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvl   82 (245)
T COG3967           3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVL   82 (245)
T ss_pred             ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchhee
Confidence            4567999999999999999999999999999999998766321  1222233334777766444433       357999


Q ss_pred             EEcccCcC
Q 046878           76 ISTVAYPQ   83 (104)
Q Consensus        76 v~~a~~~~   83 (104)
                      +|+||...
T Consensus        83 iNNAGIqr   90 (245)
T COG3967          83 INNAGIQR   90 (245)
T ss_pred             eecccccc
Confidence            99999865

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.02  E-value=1.8e-09  Score=68.27  Aligned_cols=76  Identities=8%  Similarity=0.214  Sum_probs=53.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-ccc-cccc----cccccc-ccccChHHHHHhhc-------cc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSR-TSKL----EIHKEF-QELDEHEKIISILK-------EV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~-~~~~----~~~~~~-~d~~~~~~~~~~~~-------~~   72 (104)
                      +++++|+||+|++|.++++.|++.|+.++++.++... ... ....    .....+ .|+.|.+++.+++.       .+
T Consensus         9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~i   88 (258)
T PRK09134          9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPI   88 (258)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999998887765322 110 0000    011111 38888887777654       47


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |+|||++|..
T Consensus        89 D~vi~~ag~~   98 (258)
T PRK09134         89 TLLVNNASLF   98 (258)
T ss_pred             CEEEECCcCC
Confidence            9999999863

>PRK06720 hypothetical protein; Provisional

Probab=99.00  E-value=1.9e-09  Score=64.65  Aligned_cols=79  Identities=9%  Similarity=0.121  Sum_probs=55.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~   71 (104)
                      ++.+.++|+|+++.+|.++++.|.+.|++|.+++|+.+..... ...     .......|+.+.+++.+++       .+
T Consensus        14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~   93 (169)
T PRK06720         14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR   93 (169)
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999876433110 000     1111112777777666543       46


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|++||++|...
T Consensus        94 iDilVnnAG~~~  105 (169)
T PRK06720         94 IDMLFQNAGLYK  105 (169)
T ss_pred             CCEEEECCCcCC
Confidence            899999999754

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.00  E-value=9.4e-10  Score=68.56  Aligned_cols=78  Identities=15%  Similarity=0.162  Sum_probs=56.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---ccccc-cccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---EIHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      ++.++++|+|++|++|+++++.|.+.|++|++++|+++..+.. ...   ..... ..|+.+++++.++++       .+
T Consensus         3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   82 (238)
T PRK05786          3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI   82 (238)
T ss_pred             cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            3457999999999999999999999999999999987543211 000   01111 138888887776653       35


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |.++++++..
T Consensus        83 d~ii~~ag~~   92 (238)
T PRK05786         83 DGLVVTVGGY   92 (238)
T ss_pred             CEEEEcCCCc
Confidence            9999999853

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.00  E-value=2.3e-09  Score=66.09  Aligned_cols=82  Identities=15%  Similarity=0.260  Sum_probs=59.7

Q ss_pred             CCCCCCCCeEEEEcc-CChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHhhc--------
Q 046878            1 MEGENTKPKILIFGG-TGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILK--------   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga-~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~--------   70 (104)
                      |+.....++|+|+|| .|.||.++++++.++|+.|++..|+.+.-.... +......--|+.+++++.+..+        
T Consensus         1 ~e~~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    1 SELQSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCcccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            455556678999998 688999999999999999999999876653332 1221111127888887766542        


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ..|+++|+||.+
T Consensus        81 kld~L~NNAG~~   92 (289)
T KOG1209|consen   81 KLDLLYNNAGQS   92 (289)
T ss_pred             ceEEEEcCCCCC
Confidence            469999999974

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.00  E-value=2.3e-09  Score=66.86  Aligned_cols=75  Identities=13%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-cccc----cccc-cccccChHHHHHhhc-------ccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKLE----IHKE-FQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~~----~~~~-~~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++++|+|++|++|+++++.|+++|+.++++.|+... .... ....    .... ..|+.+++++.++++       .+|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            478999999999999999999999999888873221 1000 0000    0111 127888777766553       579


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      +|||++|..
T Consensus        81 ~vi~~ag~~   89 (242)
T TIGR01829        81 VLVNNAGIT   89 (242)
T ss_pred             EEEECCCCC
Confidence            999999864

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02415 23BDH acetoin reductases

Probab=99.00  E-value=8.7e-10  Score=69.33  Aligned_cols=75  Identities=15%  Similarity=0.224  Sum_probs=54.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c---c-cccc-cccccChHHHHHhhc-------cccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L---E-IHKE-FQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~---~-~~~~-~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++++|+|++|.+|.+++++|++.|++|+++.|++...+.... .   . .... ..|+.+++++.+++.       .+|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999887543211100 0   0 0111 138888888777653       4699


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        81 vi~~ag~~   88 (254)
T TIGR02415        81 MVNNAGVA   88 (254)
T ss_pred             EEECCCcC
Confidence            99999874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.00  E-value=1.2e-09  Score=70.57  Aligned_cols=78  Identities=9%  Similarity=0.146  Sum_probs=57.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----ccccccccccChHHHHHhh-------ccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHKEFQELDEHEKIISIL-------KEV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~~~~d~~~~~~~~~~~-------~~~   72 (104)
                      ++.++++|+|++|.+|.++++.|.+.|++|.+++|+.+..+.. ...    .......|+.|.+++.+++       ..+
T Consensus         7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   86 (296)
T PRK05872          7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI   86 (296)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4567999999999999999999999999999999986543211 001    1111113888887776654       357


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        87 d~vI~nAG~~   96 (296)
T PRK05872         87 DVVVANAGIA   96 (296)
T ss_pred             CEEEECCCcC
Confidence            9999999974

>PRK08703 short chain dehydrogenase; Provisional

Probab=98.99  E-value=1.6e-09  Score=67.74  Aligned_cols=40  Identities=25%  Similarity=0.331  Sum_probs=35.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |+.++++|+|++|++|+++++.|++.|++|.+++|++...
T Consensus         4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~   43 (239)
T PRK08703          4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL   43 (239)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH
Confidence            5567999999999999999999999999999999987543

>PRK09242 tropinone reductase; Provisional

Probab=98.99  E-value=1.4e-09  Score=68.64  Aligned_cols=78  Identities=17%  Similarity=0.277  Sum_probs=55.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-------ccccccccccChHHHHHhh-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-------EIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-------~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      ++.++++|+|++|.+|.++++.|.+.|++|.+++|+.+..+.. ...       .......|+.+++++..++       
T Consensus         7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (257)
T PRK09242          7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW   86 (257)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4567999999999999999999999999999999876543111 000       1111112788877665554       


Q ss_pred             ccccEEEEcccCc
Q 046878           70 KEVGVVISTVAYP   82 (104)
Q Consensus        70 ~~~d~vv~~a~~~   82 (104)
                      .++|++||++|..
T Consensus        87 g~id~li~~ag~~   99 (257)
T PRK09242         87 DGLHILVNNAGGN   99 (257)
T ss_pred             CCCCEEEECCCCC
Confidence            3579999999973

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.99  E-value=1.5e-09  Score=69.48  Aligned_cols=79  Identities=18%  Similarity=0.254  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc----cc---cc-cccccccccChHHHHHh-------h
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----SK---LE-IHKEFQELDEHEKIISI-------L   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~----~~---~~-~~~~~~d~~~~~~~~~~-------~   69 (104)
                      +.++.++||||+..||.+++++|..+|..++.+.|+....+..    ..   .. ......|+.|.+++.+.       +
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            5668999999999999999999999999877777765544211    00   01 11111288888877754       4


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      .++|++||+||...
T Consensus        90 g~vDvLVNNAG~~~  103 (282)
T KOG1205|consen   90 GRVDVLVNNAGISL  103 (282)
T ss_pred             CCCCEEEecCcccc
Confidence            67999999999864

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.99  E-value=2.4e-09  Score=67.86  Aligned_cols=82  Identities=11%  Similarity=0.052  Sum_probs=56.7

Q ss_pred             CCCCCCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----cc---ccccccccccChHHHHHhh--
Q 046878            1 MEGENTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KL---EIHKEFQELDEHEKIISIL--   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~---~~~~~~~d~~~~~~~~~~~--   69 (104)
                      |...++.++++|+||+  +.||.++++.|++.|++|++.+|+....+..+    ..   .......|+.|++++.+++  
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            5556677899999997  79999999999999999998877532211111    00   0111112888888776654  


Q ss_pred             -----ccccEEEEcccCc
Q 046878           70 -----KEVGVVISTVAYP   82 (104)
Q Consensus        70 -----~~~d~vv~~a~~~   82 (104)
                           ..+|++||++|..
T Consensus        81 ~~~~~g~ld~lv~nag~~   98 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFA   98 (257)
T ss_pred             HHHhCCCccEEEECcccC
Confidence                 3579999999853

>PRK07985 oxidoreductase; Provisional

Probab=98.99  E-value=1.5e-09  Score=70.07  Aligned_cols=77  Identities=16%  Similarity=0.179  Sum_probs=53.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--cccc-cc-----ccccccccccChHHHHHhh-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRTS-KL-----EIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~~-~~-----~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      ++.++++|+||+|++|+++++.|+++|++|++.+|+....  +... ..     .......|+.+++++.+++       
T Consensus        47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  126 (294)
T PRK07985         47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL  126 (294)
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            4457899999999999999999999999998877653221  0000 00     0001113888887776654       


Q ss_pred             ccccEEEEcccC
Q 046878           70 KEVGVVISTVAY   81 (104)
Q Consensus        70 ~~~d~vv~~a~~   81 (104)
                      .++|++||++|.
T Consensus       127 g~id~lv~~Ag~  138 (294)
T PRK07985        127 GGLDIMALVAGK  138 (294)
T ss_pred             CCCCEEEECCCC
Confidence            357999999985

>PRK12744 short chain dehydrogenase; Provisional

Probab=98.98  E-value=4e-09  Score=66.61  Aligned_cols=77  Identities=14%  Similarity=0.207  Sum_probs=53.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-ccc----cc---c-cccc-cccccChHHHHHhhc----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-RTS----KL---E-IHKE-FQELDEHEKIISILK----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-~~~----~~---~-~~~~-~~d~~~~~~~~~~~~----   70 (104)
                      ++.++++|+|++|.+|.++++.|++.|+++.++.++..... ...    ..   . .... ..|+.+++++.+++.    
T Consensus         6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (257)
T PRK12744          6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA   85 (257)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence            45579999999999999999999999999777766543211 000    00   0 0111 128888888776653    


Q ss_pred             ---cccEEEEcccC
Q 046878           71 ---EVGVVISTVAY   81 (104)
Q Consensus        71 ---~~d~vv~~a~~   81 (104)
                         ++|++||++|.
T Consensus        86 ~~~~id~li~~ag~   99 (257)
T PRK12744         86 AFGRPDIAINTVGK   99 (257)
T ss_pred             hhCCCCEEEECCcc
Confidence               57999999996

>PRK06924 short chain dehydrogenase; Provisional

Probab=98.98  E-value=1.7e-09  Score=67.89  Aligned_cols=75  Identities=12%  Similarity=0.211  Sum_probs=51.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-ccc-ccc--cccccccccccChHHHHHhhccc-----------
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSR-TSK--LEIHKEFQELDEHEKIISILKEV-----------   72 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~-~~~--~~~~~~~~d~~~~~~~~~~~~~~-----------   72 (104)
                      ++++|+|++|++|+++++.|+++|++|.+++|++.+ ... ...  ........|+.+++++.++++.+           
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVSS   81 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCCc
Confidence            589999999999999999999999999999987622 110 000  01111113888888887776432           


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      .++|+++|..
T Consensus        82 ~~~v~~ag~~   91 (251)
T PRK06924         82 IHLINNAGMV   91 (251)
T ss_pred             eEEEEcceec
Confidence            1788888763

>PRK08324 short chain dehydrogenase; Validated

Probab=98.97  E-value=3.6e-09  Score=75.24  Aligned_cols=77  Identities=14%  Similarity=0.183  Sum_probs=56.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc---cc-cccccccChHHHHHhhc-------ccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE---IH-KEFQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~---~~-~~~~d~~~~~~~~~~~~-------~~d   73 (104)
                      +.++++|+||+|++|+++++.|.+.|+.|++++|+.+....... ..   .. ....|+.+++++.++++       ++|
T Consensus       421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD  500 (681)
T PRK08324        421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD  500 (681)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            45789999999999999999999999999999998754321110 00   11 11128888887776654       689


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      +|||++|..
T Consensus       501 vvI~~AG~~  509 (681)
T PRK08324        501 IVVSNAGIA  509 (681)
T ss_pred             EEEECCCCC
Confidence            999999964

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=98.97  E-value=1.8e-09  Score=76.69  Aligned_cols=78  Identities=9%  Similarity=0.223  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-------ccccccccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-------EIHKEFQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-------~~~~~~~d~~~~~~~~~~~~------   70 (104)
                      ++.++++||||+|++|+++++.|++.|++|.+++|+.+..+... ..       .......|+.+++++.+++.      
T Consensus       412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~  491 (676)
T TIGR02632       412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY  491 (676)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            34578999999999999999999999999999998764431110 00       00111138888888877764      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||++|..
T Consensus       492 g~iDilV~nAG~~  504 (676)
T TIGR02632       492 GGVDIVVNNAGIA  504 (676)
T ss_pred             CCCcEEEECCCCC
Confidence             689999999974

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.97  E-value=8.5e-09  Score=65.95  Aligned_cols=92  Identities=18%  Similarity=0.321  Sum_probs=70.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----ccccccc------cccccChHHHHHhhc--cccE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLEIHKE------FQELDEHEKIISILK--EVGV   74 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~~~~~------~~d~~~~~~~~~~~~--~~d~   74 (104)
                      +++.+|+|-||.-|+.|++.|++.|++|.++.|+........    +..+...      ..|++|..++.++++  ++|-
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE   81 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE   81 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence            357899999999999999999999999999998854431110    1111111      129999999999986  5799


Q ss_pred             EEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878           75 VISTVAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        75 vv~~a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      |+|+++.+.               ..++.+++++.+..+
T Consensus        82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~  120 (345)
T COG1089          82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG  120 (345)
T ss_pred             heeccccccccccccCcceeeeechhHHHHHHHHHHHhC
Confidence            999999876               346789999988765

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.97  E-value=2.9e-09  Score=67.81  Aligned_cols=81  Identities=11%  Similarity=0.087  Sum_probs=55.5

Q ss_pred             CCCCCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----c-cccccccccChHHHHHhhc---
Q 046878            1 MEGENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----E-IHKEFQELDEHEKIISILK---   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~-~~~~~~d~~~~~~~~~~~~---   70 (104)
                      |.. |+.++++||||++  .||+++++.|+++|+.|.+.+|+....+..+..    . ......|+.|++++.+++.   
T Consensus         1 ~~~-l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   79 (262)
T PRK07984          1 MGF-LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELG   79 (262)
T ss_pred             Ccc-cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHH
Confidence            444 5667899999975  899999999999999998888763111111111    1 0111138888888777653   


Q ss_pred             ----cccEEEEcccCc
Q 046878           71 ----EVGVVISTVAYP   82 (104)
Q Consensus        71 ----~~d~vv~~a~~~   82 (104)
                          .+|++||++|..
T Consensus        80 ~~~g~iD~linnAg~~   95 (262)
T PRK07984         80 KVWPKFDGFVHSIGFA   95 (262)
T ss_pred             hhcCCCCEEEECCccC
Confidence                479999999853

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.97  E-value=1.6e-09  Score=67.87  Aligned_cols=77  Identities=13%  Similarity=0.157  Sum_probs=54.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccc-ccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+|++|.+|+.+++.|.++|+.|++++|++.+.+.. ....    ... ...|+.+++++.++++       .
T Consensus         3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (253)
T PRK08217          3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ   82 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999886443111 0000    011 1127777777665543       4


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|+|||++|.
T Consensus        83 id~vi~~ag~   92 (253)
T PRK08217         83 LNGLINNAGI   92 (253)
T ss_pred             CCEEEECCCc
Confidence            7999999985

>PRK07904 short chain dehydrogenase; Provisional

Probab=98.97  E-value=3.7e-09  Score=66.90  Aligned_cols=76  Identities=14%  Similarity=0.240  Sum_probs=53.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCC-cccc-cccc-----ccccc-ccccChHHHHHhh------cc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTE-NSRT-SKLE-----IHKEF-QELDEHEKIISIL------KE   71 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~-~~~~-~~~~-----~~~~~-~d~~~~~~~~~~~------~~   71 (104)
                      .++++|+||+|.+|++++++|+++| +.|+++.|+++. .+.. +...     ....+ .|+.|++++.+++      .+
T Consensus         8 ~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~   87 (253)
T PRK07904          8 PQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGD   87 (253)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCC
Confidence            4689999999999999999999985 899999998764 2110 0010     11111 2777777655443      36


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      .|++|+++|..
T Consensus        88 id~li~~ag~~   98 (253)
T PRK07904         88 VDVAIVAFGLL   98 (253)
T ss_pred             CCEEEEeeecC
Confidence            89999999874

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=98.96  E-value=2.4e-09  Score=67.13  Aligned_cols=76  Identities=9%  Similarity=0.174  Sum_probs=51.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC-CCcccc-ccc-----ccccccccccChHHHHHhh-------ccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV-TENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KEV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~-~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~~   72 (104)
                      +++++|+||+|++|+.+++.|+++|+++.++.++. +..+.. ...     .......|+.+++++.+++       ..+
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            35899999999999999999999999887765443 221100 000     1111113788877766654       358


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        82 d~li~~ag~~   91 (248)
T PRK06947         82 DALVNNAGIV   91 (248)
T ss_pred             CEEEECCccC
Confidence            9999999863

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.96  E-value=2.5e-09  Score=67.94  Aligned_cols=81  Identities=15%  Similarity=0.105  Sum_probs=55.3

Q ss_pred             CCCCCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhh----
Q 046878            1 MEGENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISIL----   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~----   69 (104)
                      |+. ++.++++||||  ++.||+++++.|+++|++|++..|+....+.....     .......|+.|++++.+++    
T Consensus         1 ~~~-~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          1 MGF-LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             CCc-cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence            444 56679999996  67999999999999999998876653211111000     1111123888888777665    


Q ss_pred             ---ccccEEEEcccCc
Q 046878           70 ---KEVGVVISTVAYP   82 (104)
Q Consensus        70 ---~~~d~vv~~a~~~   82 (104)
                         ..+|++||++|..
T Consensus        80 ~~~g~iD~lVnnAG~~   95 (261)
T PRK08690         80 KHWDGLDGLVHSIGFA   95 (261)
T ss_pred             HHhCCCcEEEECCccC
Confidence               3589999999874

>PRK05855 short chain dehydrogenase; Validated

Probab=98.96  E-value=1.5e-09  Score=75.11  Aligned_cols=78  Identities=10%  Similarity=0.148  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +..++++|+||+|++|+++++.|.++|++|++++|+....+.... .     .......|+.|++++.++++       .
T Consensus       313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  392 (582)
T PRK05855        313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV  392 (582)
T ss_pred             CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            455789999999999999999999999999999998644321100 0     00111138889888777664       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus       393 id~lv~~Ag~~  403 (582)
T PRK05855        393 PDIVVNNAGIG  403 (582)
T ss_pred             CcEEEECCccC
Confidence            79999999974

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=98.96  E-value=1.5e-09  Score=67.94  Aligned_cols=75  Identities=8%  Similarity=0.211  Sum_probs=51.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------ccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++++|+||+|++|+++++.|+++|++|.++ .|++...... ...     .......|+.|++++.++++       .+|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            579999999999999999999999998765 3443222100 000     00111138888888877765       358


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      +|||++|..
T Consensus        82 ~vi~~ag~~   90 (247)
T PRK09730         82 ALVNNAGIL   90 (247)
T ss_pred             EEEECCCCC
Confidence            999999964

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.96  E-value=1.6e-09  Score=76.43  Aligned_cols=78  Identities=15%  Similarity=0.221  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++|+||+|++|+++++.|+++|++|.+++|+++..+.. ...     .......|+.|.+++.++++       +
T Consensus       369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~  448 (657)
T PRK07201        369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH  448 (657)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            5567899999999999999999999999999999986543111 000     01111138888888777664       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus       449 id~li~~Ag~~  459 (657)
T PRK07201        449 VDYLVNNAGRS  459 (657)
T ss_pred             CCEEEECCCCC
Confidence            89999999963

>PRK07832 short chain dehydrogenase; Provisional

Probab=98.95  E-value=1.9e-09  Score=68.64  Aligned_cols=75  Identities=11%  Similarity=0.245  Sum_probs=53.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccc-ccccccChHHHHHhhc-------ccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHK-EFQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~-~~~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++++|+||+|.+|.++++.|++.|+.|.+++|+.+..+.. ...     .... ...|+.+++++.+++.       ++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4799999999999999999999999999988876433111 000     0111 1137888777665543       479


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        81 ~lv~~ag~~   89 (272)
T PRK07832         81 VVMNIAGIS   89 (272)
T ss_pred             EEEECCCCC
Confidence            999999864

>PRK07677 short chain dehydrogenase; Provisional

Probab=98.95  E-value=1.9e-09  Score=67.88  Aligned_cols=74  Identities=18%  Similarity=0.289  Sum_probs=53.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----cccccc-ccccChHHHHHhh-------ccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----EIHKEF-QELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~~~~~~-~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ++++|+|++|.+|+++++.|.+.|+.|++++|+....+... ..    .....+ .|+.+++++.+++       .++|+
T Consensus         2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (252)
T PRK07677          2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA   81 (252)
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            58999999999999999999999999999998865431110 00    011111 2888888776655       35799


Q ss_pred             EEEcccC
Q 046878           75 VISTVAY   81 (104)
Q Consensus        75 vv~~a~~   81 (104)
                      +||++|.
T Consensus        82 lI~~ag~   88 (252)
T PRK07677         82 LINNAAG   88 (252)
T ss_pred             EEECCCC
Confidence            9999985

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.95  E-value=3.8e-09  Score=66.91  Aligned_cols=82  Identities=13%  Similarity=0.225  Sum_probs=56.4

Q ss_pred             CCCCCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcCCC-C-cccc-cccc-ccccc-ccccChHHHHHhh----
Q 046878            1 MEGENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARPVT-E-NSRT-SKLE-IHKEF-QELDEHEKIISIL----   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~~~-~-~~~~-~~~~-~~~~~-~d~~~~~~~~~~~----   69 (104)
                      |-+.++.++++|||+  ++.||.++++.|++.|+.|++.+|+.. . .+.. .... ....+ .|+.+++++.+++    
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHH
Confidence            334466689999999  799999999999999999998887641 1 1110 0010 11111 3888887776654    


Q ss_pred             ---ccccEEEEcccCc
Q 046878           70 ---KEVGVVISTVAYP   82 (104)
Q Consensus        70 ---~~~d~vv~~a~~~   82 (104)
                         ..+|++||++|..
T Consensus        81 ~~~g~iD~li~nAG~~   96 (256)
T PRK07889         81 EHVDGLDGVVHSIGFA   96 (256)
T ss_pred             HHcCCCcEEEEccccc
Confidence               3589999999864

>PRK09620 hypothetical protein; Provisional

Probab=98.95  E-value=5.4e-09  Score=65.50  Aligned_cols=79  Identities=25%  Similarity=0.366  Sum_probs=51.7

Q ss_pred             CCCeEEEEccC----------------ChhhHHHHHHHHhCCCeEEEEEcCCCCccc--ccccccccccccccChHHHHH
Q 046878            6 TKPKILIFGGT----------------GYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKLEIHKEFQELDEHEKIIS   67 (104)
Q Consensus         6 ~~~~i~i~Ga~----------------G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~~~~~d~~~~~~~~~   67 (104)
                      +.++|+||+|.                |++|.++++.|+.+|++|+++++.......  +..........+.+..+.+.+
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~~~~V~s~~d~~~~l~~   81 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLELHPFEGIIDLQDKMKS   81 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCceeEEEEecHHHHHHHHHH
Confidence            45789999775                999999999999999999988764321101  111111110011222356666


Q ss_pred             hhc--cccEEEEcccCcCh
Q 046878           68 ILK--EVGVVISTVAYPQL   84 (104)
Q Consensus        68 ~~~--~~d~vv~~a~~~~~   84 (104)
                      .+.  ++|+|||+|+.+++
T Consensus        82 ~~~~~~~D~VIH~AAvsD~  100 (229)
T PRK09620         82 IITHEKVDAVIMAAAGSDW  100 (229)
T ss_pred             HhcccCCCEEEECccccce
Confidence            674  68999999998764

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.94  E-value=1.2e-08  Score=60.38  Aligned_cols=75  Identities=17%  Similarity=0.207  Sum_probs=50.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc----cc---c-ccc-ccccccChHHHHHhhc-------
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS----KL---E-IHK-EFQELDEHEKIISILK-------   70 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~----~~---~-~~~-~~~d~~~~~~~~~~~~-------   70 (104)
                      ++++|+|++|++|.++++.|.++|. .+.++.|++.......    ..   . ... ...|+.+++.+.+.+.       
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            3689999999999999999999886 6777777654331100    00   0 011 1127777777766653       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|.++|+++..
T Consensus        81 ~id~li~~ag~~   92 (180)
T smart00822       81 PLRGVIHAAGVL   92 (180)
T ss_pred             CeeEEEEccccC
Confidence            369999999853

It uses NADPH to reduce the keto group to a hydroxy group.

>PRK07791 short chain dehydrogenase; Provisional

Probab=98.94  E-value=4e-09  Score=67.88  Aligned_cols=78  Identities=12%  Similarity=0.198  Sum_probs=54.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC---------CCccc-cccc-----ccccccccccChHHHHHhh
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV---------TENSR-TSKL-----EIHKEFQELDEHEKIISIL   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~---------~~~~~-~~~~-----~~~~~~~d~~~~~~~~~~~   69 (104)
                      ++.++++|+||++.||.++++.|++.|+.|++++++.         +.... ....     .......|+.+++++.+++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            5667999999999999999999999999998887764         11100 0000     0001112888877766654


Q ss_pred             -------ccccEEEEcccCc
Q 046878           70 -------KEVGVVISTVAYP   82 (104)
Q Consensus        70 -------~~~d~vv~~a~~~   82 (104)
                             ..+|++||++|..
T Consensus        84 ~~~~~~~g~id~lv~nAG~~  103 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGIL  103 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCC
Confidence                   3579999999974

>PRK06123 short chain dehydrogenase; Provisional

Probab=98.93  E-value=2.7e-09  Score=66.91  Aligned_cols=75  Identities=7%  Similarity=0.158  Sum_probs=52.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-ccc-----ccccccccccChHHHHHhhc-------ccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKL-----EIHKEFQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++++|+|++|++|.+++++|+++|+.+.+..+++.. .... ...     .......|+.+.+++.+++.       .+|
T Consensus         3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06123          3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLD   82 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence            579999999999999999999999888776644322 1000 000     00011128888888777664       579


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        83 ~li~~ag~~   91 (248)
T PRK06123         83 ALVNNAGIL   91 (248)
T ss_pred             EEEECCCCC
Confidence            999999874

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=98.93  E-value=8e-09  Score=64.38  Aligned_cols=72  Identities=21%  Similarity=0.227  Sum_probs=48.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccccccccccc-ccccChHHHHH---hhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIIS---ILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~---~~~~~d~vv~~a~~   81 (104)
                      |+++|+|++|+||+++++.|++++  ..+....|+....  .... ....+ .|+.+.+++.+   .+++.|++||++|.
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~--~~~~-~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG~   77 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD--FQHD-NVQWHALDVTDEAEIKQLSEQFTQLDWLINCVGM   77 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc--cccC-ceEEEEecCCCHHHHHHHHHhcCCCCEEEECCcc
Confidence            479999999999999999999985  4555555543221  1111 11111 37777776555   45678999999997


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus        78 ~   78 (235)
T PRK09009         78 L   78 (235)
T ss_pred             c
Confidence            5

>PRK08862 short chain dehydrogenase; Provisional

Probab=98.92  E-value=3.8e-09  Score=65.98  Aligned_cols=77  Identities=13%  Similarity=0.084  Sum_probs=55.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------c-
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------K-   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~-   70 (104)
                      ++.++++|+|+++.+|.++++.|.+.|++|.++.|+.+..+.. +..     +......|+.+++++.+++       . 
T Consensus         3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (227)
T PRK08862          3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR   82 (227)
T ss_pred             CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4567999999999999999999999999999999887554211 000     1111112777777776554       3 


Q ss_pred             cccEEEEcccC
Q 046878           71 EVGVVISTVAY   81 (104)
Q Consensus        71 ~~d~vv~~a~~   81 (104)
                      .+|++||++|.
T Consensus        83 ~iD~li~nag~   93 (227)
T PRK08862         83 APDVLVNNWTS   93 (227)
T ss_pred             CCCEEEECCcc
Confidence            68999999974

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=98.92  E-value=6.5e-09  Score=62.90  Aligned_cols=75  Identities=17%  Similarity=0.244  Sum_probs=46.8

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC-CCcccccccccc-------ccc-ccccChHHHHHhhc-------c
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV-TENSRTSKLEIH-------KEF-QELDEHEKIISILK-------E   71 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~-~~~~~~~~~~~~-------~~~-~d~~~~~~~~~~~~-------~   71 (104)
                      +++|+|+.|.+|..+++.|..++. ++.+++|+. ...........+       ... .|+.|++++.+++.       .
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            589999999999999999999874 788999983 222111111111       111 28999998888864       4


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      ++.|||+++...
T Consensus        82 i~gVih~ag~~~   93 (181)
T PF08659_consen   82 IDGVIHAAGVLA   93 (181)
T ss_dssp             EEEEEE------
T ss_pred             cceeeeeeeeec
Confidence            689999999854

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK08303 short chain dehydrogenase; Provisional

Probab=98.91  E-value=6.6e-09  Score=67.54  Aligned_cols=80  Identities=10%  Similarity=0.087  Sum_probs=55.9

Q ss_pred             CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-------cccc----cc-----ccccccccccChHHH
Q 046878            2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-------SRTS----KL-----EIHKEFQELDEHEKI   65 (104)
Q Consensus         2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-------~~~~----~~-----~~~~~~~d~~~~~~~   65 (104)
                      ...++.++++|+||++.||.++++.|++.|+.|++++|+....       +...    ..     .......|+.+++++
T Consensus         3 ~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v   82 (305)
T PRK08303          3 MKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQV   82 (305)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            3446778999999999999999999999999999999874321       0000    00     001111288888777


Q ss_pred             HHhh-------ccccEEEEcc-cC
Q 046878           66 ISIL-------KEVGVVISTV-AY   81 (104)
Q Consensus        66 ~~~~-------~~~d~vv~~a-~~   81 (104)
                      .+++       .++|++||++ |.
T Consensus        83 ~~~~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         83 RALVERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             HHHHHHHHHHcCCccEEEECCccc
Confidence            6654       3579999999 63

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=98.91  E-value=8.7e-09  Score=64.68  Aligned_cols=39  Identities=15%  Similarity=0.210  Sum_probs=34.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      ++.++++|+|++|++|.++++.|++.|++|.+++|+...
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~   48 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEK   48 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHH
Confidence            456799999999999999999999999999999998643

>PRK07831 short chain dehydrogenase; Provisional

Probab=98.91  E-value=4.9e-09  Score=66.39  Aligned_cols=78  Identities=9%  Similarity=0.191  Sum_probs=55.6

Q ss_pred             CCCCeEEEEccCC-hhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------cccccc-ccccChHHHHHhhc-----
Q 046878            5 NTKPKILIFGGTG-YLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKEF-QELDEHEKIISILK-----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G-~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~~-~d~~~~~~~~~~~~-----   70 (104)
                      ++.++++|+|++| .+|.++++.|+++|+.|++.+|+..+.+.. ...      .....+ .|+.+++++.+++.     
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4567999999987 699999999999999999988876543211 000      011111 28888887776653     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        .+|++||++|..
T Consensus        95 ~g~id~li~~ag~~  108 (262)
T PRK07831         95 LGRLDVLVNNAGLG  108 (262)
T ss_pred             cCCCCEEEECCCCC
Confidence              579999999964

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=98.90  E-value=4.4e-09  Score=68.51  Aligned_cols=75  Identities=19%  Similarity=0.352  Sum_probs=53.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-cccc----ccccc-ccccChHHHHHhh-------ccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKLE----IHKEF-QELDEHEKIISIL-------KEV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~----~~~~~-~d~~~~~~~~~~~-------~~~   72 (104)
                      +++++|+||++.+|.++++.|+++| ++|++++|+.+..+.. ....    ....+ .|+.+.+++.+++       .++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999 9999999876443111 0000    01111 2788877766554       358


Q ss_pred             cEEEEcccC
Q 046878           73 GVVISTVAY   81 (104)
Q Consensus        73 d~vv~~a~~   81 (104)
                      |++||++|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999999986

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK06484 short chain dehydrogenase; Validated

Probab=98.90  E-value=3.7e-09  Score=72.81  Aligned_cols=76  Identities=13%  Similarity=0.264  Sum_probs=55.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c--ccccccccccChHHHHHhhc-------cccEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L--EIHKEFQELDEHEKIISILK-------EVGVVI   76 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~-------~~d~vv   76 (104)
                      .++++||||+|.||.++++.|.++|++|++++|+....+.... .  .......|+.|++++.+++.       .+|++|
T Consensus       269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  348 (520)
T PRK06484        269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLV  348 (520)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4689999999999999999999999999999987644321110 0  11111138888887776653       479999


Q ss_pred             EcccCc
Q 046878           77 STVAYP   82 (104)
Q Consensus        77 ~~a~~~   82 (104)
                      |++|..
T Consensus       349 ~nAg~~  354 (520)
T PRK06484        349 NNAGIA  354 (520)
T ss_pred             ECCCCc
Confidence            999964

>PRK07578 short chain dehydrogenase; Provisional

Probab=98.90  E-value=1.1e-08  Score=62.40  Aligned_cols=63  Identities=21%  Similarity=0.371  Sum_probs=50.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc---cccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK---EVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a~~~   82 (104)
                      ++++|+|++|.+|.++++.|.++ ++|.+++|++...           ..|+.++++++++++   ++|++||++|..
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~~-----------~~D~~~~~~~~~~~~~~~~id~lv~~ag~~   66 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSGDV-----------QVDITDPASIRALFEKVGKVDAVVSAAGKV   66 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCce-----------EecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence            37999999999999999999988 8999988875311           137777777777654   689999999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=98.90  E-value=4.5e-09  Score=66.17  Aligned_cols=78  Identities=12%  Similarity=0.134  Sum_probs=49.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc-CCCCcccc-ccc-----ccccccccccChHHHHHhh--------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRT-SKL-----EIHKEFQELDEHEKIISIL--------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r-~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~--------   69 (104)
                      +++++++|+|++|++|.++++.|.+.|++|.+..+ +.+..... ...     .......|+.+.+++...+        
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            34579999999999999999999999999887653 32222110 000     0001112666655443322        


Q ss_pred             -----ccccEEEEcccCc
Q 046878           70 -----KEVGVVISTVAYP   82 (104)
Q Consensus        70 -----~~~d~vv~~a~~~   82 (104)
                           ..+|++||++|..
T Consensus        82 ~~~g~~~id~lv~~Ag~~   99 (252)
T PRK12747         82 NRTGSTKFDILINNAGIG   99 (252)
T ss_pred             hhcCCCCCCEEEECCCcC
Confidence                 1689999999964

>PLN00106 malate dehydrogenase

Probab=98.90  E-value=2.1e-08  Score=65.70  Aligned_cols=92  Identities=13%  Similarity=0.133  Sum_probs=60.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccccc--ccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKL--EIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ..||.|+|++|.+|+.++..|...+  .++.+++.++......+-.  .....+.++.+.+++.+.++++|+||+++|.+
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~~~~i~~~~~~~d~~~~l~~aDiVVitAG~~   97 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINTPAQVRGFLGDDQLGDALKGADLVIIPAGVP   97 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCcCceEEEEeCCCCHHHHcCCCCEEEEeCCCC
Confidence            4689999999999999999998665  3788988876222111100  00111224344556788999999999999985


Q ss_pred             C-------------hhhHHHHHHHHHHhC
Q 046878           83 Q-------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~-------------~~~~~~l~~~~~~~~   98 (104)
                      .             ..-..++++.+.+.+
T Consensus        98 ~~~g~~R~dll~~N~~i~~~i~~~i~~~~  126 (323)
T PLN00106         98 RKPGMTRDDLFNINAGIVKTLCEAVAKHC  126 (323)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            4             122345666666655

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.89  E-value=1.6e-08  Score=68.78  Aligned_cols=78  Identities=9%  Similarity=0.145  Sum_probs=54.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc---cccccccccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT---SKLEIHKEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++|+|++|.+|.++++.|.++|++|++++++.......   ..........|+.+++++.+++.       ++|+
T Consensus       208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~  287 (450)
T PRK08261        208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI  287 (450)
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            3457899999999999999999999999999888753221000   00110011127888777766553       5799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      |||++|..
T Consensus       288 vi~~AG~~  295 (450)
T PRK08261        288 VVHNAGIT  295 (450)
T ss_pred             EEECCCcC
Confidence            99999964

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.89  E-value=8.6e-09  Score=62.29  Aligned_cols=89  Identities=13%  Similarity=0.162  Sum_probs=61.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c---cccccc-ccccChHHHHHhhc-------cccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L---EIHKEF-QELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~---~~~~~~-~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      |+++|+|++|++|. +++.|.+.|++|.+.+|+++....... .   .....+ .|+.|++++.+++.       ..|++
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            47999999987765 999999999999999987644311100 0   111111 28888888877664       35777


Q ss_pred             EEcccCcChhhHHHHHHHHHHhCCcc
Q 046878           76 ISTVAYPQLLDQLKIVDAIKVAGNIK  101 (104)
Q Consensus        76 v~~a~~~~~~~~~~l~~~~~~~~~v~  101 (104)
                      |+.+-..   ...++..+|++.+ ++
T Consensus        80 v~~vh~~---~~~~~~~~~~~~g-v~  101 (177)
T PRK08309         80 VAWIHSS---AKDALSVVCRELD-GS  101 (177)
T ss_pred             EEecccc---chhhHHHHHHHHc-cC
Confidence            7666543   4678999999887 77

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.89  E-value=1e-08  Score=67.31  Aligned_cols=77  Identities=14%  Similarity=0.202  Sum_probs=52.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-------CeEEEEEcCCCCcc-ccccccccc----ccccccChHHHHHhhccccE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-------HNTFVYARPVTENS-RTSKLEIHK----EFQELDEHEKIISILKEVGV   74 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-------~~v~~~~r~~~~~~-~~~~~~~~~----~~~d~~~~~~~~~~~~~~d~   74 (104)
                      +.+|+|+||+|++|++++..|+..+       .++.++++++.... .....+...    ...+.....++.+.++++|+
T Consensus         2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~~~~~~~~~~~~~l~~aDi   81 (325)
T cd01336           2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLLKSVVATTDPEEAFKDVDV   81 (325)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhccccccCCceecCCHHHHhCCCCE
Confidence            4589999999999999999998744       47999998653210 111111111    00133334567788999999


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      |||+||.+.
T Consensus        82 VI~tAG~~~   90 (325)
T cd01336          82 AILVGAMPR   90 (325)
T ss_pred             EEEeCCcCC
Confidence            999999865

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK06484 short chain dehydrogenase; Validated

Probab=98.88  E-value=5.9e-09  Score=71.80  Aligned_cols=76  Identities=16%  Similarity=0.302  Sum_probs=56.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c--ccccccccccChHHHHHhhc-------cccEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L--EIHKEFQELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      +.++++|||+++.+|.++++.|.++|++|++++|+.+....... .  .......|+.+++++.++++       .+|++
T Consensus         4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (520)
T PRK06484          4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL   83 (520)
T ss_pred             CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            45789999999999999999999999999999988655421111 1  11111138888887776653       58999


Q ss_pred             EEcccC
Q 046878           76 ISTVAY   81 (104)
Q Consensus        76 v~~a~~   81 (104)
                      ||++|.
T Consensus        84 i~nag~   89 (520)
T PRK06484         84 VNNAGV   89 (520)
T ss_pred             EECCCc
Confidence            999986

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.87  E-value=9.9e-09  Score=65.05  Aligned_cols=78  Identities=10%  Similarity=0.101  Sum_probs=54.2

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----cccccccc-ccccChHHHHHhh-------c
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLEIHKEF-QELDEHEKIISIL-------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~~~~~~-~d~~~~~~~~~~~-------~   70 (104)
                      ++.++++||||+  +.||.++++.|+++|++|.+.+|+....+...    .......+ .|+.+++++.+++       .
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   87 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG   87 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence            456789999997  48999999999999999998888753211001    01111111 2888877776654       3


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ..|++||++|..
T Consensus        88 ~ld~lv~nAg~~   99 (258)
T PRK07533         88 RLDFLLHSIAFA   99 (258)
T ss_pred             CCCEEEEcCccC
Confidence            579999999863

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=98.86  E-value=1.4e-08  Score=76.61  Aligned_cols=96  Identities=20%  Similarity=0.381  Sum_probs=64.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCCCccccccc---------------cccccc-cccc------
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTENSRTSKL---------------EIHKEF-QELD------   60 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~~~~~~~~~---------------~~~~~~-~d~~------   60 (104)
                      .++|+|||++|++|+++++.|++++    +.|+.+.|...........               .....+ .|+.      
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            4689999999999999999999876    6788888864332110000               001101 1443      


Q ss_pred             ChHHHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccC
Q 046878           61 EHEKIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        61 ~~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                      +.+.+.++..++|+|||+++...            +.++.++++.+.+.+ +++|
T Consensus      1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~ 1104 (1389)
T TIGR03443      1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQF 1104 (1389)
T ss_pred             CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceE
Confidence            34566667788999999998754            345678888887765 6654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.84  E-value=2.8e-08  Score=63.81  Aligned_cols=78  Identities=14%  Similarity=0.274  Sum_probs=56.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccc----cccccccccChHHHHHhh-------cccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLE----IHKEFQELDEHEKIISIL-------KEVG   73 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~----~~~~~~d~~~~~~~~~~~-------~~~d   73 (104)
                      ++..++||||++.+|++++.+++++|..+.+++.+...... .+...    ......|+.+.+++.+..       .++|
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~  116 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD  116 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence            45789999999999999999999999988888888655421 11111    111223888877665543       4789


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      ++||+||...
T Consensus       117 ILVNNAGI~~  126 (300)
T KOG1201|consen  117 ILVNNAGIVT  126 (300)
T ss_pred             EEEecccccc
Confidence            9999999854

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=98.84  E-value=1.4e-08  Score=64.45  Aligned_cols=78  Identities=12%  Similarity=0.109  Sum_probs=53.6

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccc---cccc----ccc-cccccccChHHHHHhh-----
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSR---TSKL----EIH-KEFQELDEHEKIISIL-----   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~---~~~~----~~~-~~~~d~~~~~~~~~~~-----   69 (104)
                      ++.++++|+||+  +.||.++++.|.+.|++|.+..|+.+....   ....    ... ....|+.|++++.+++     
T Consensus         4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~   83 (258)
T PRK07370          4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ   83 (258)
T ss_pred             cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence            456789999985  799999999999999999887665432100   0000    001 1113888888777665     


Q ss_pred             --ccccEEEEcccCc
Q 046878           70 --KEVGVVISTVAYP   82 (104)
Q Consensus        70 --~~~d~vv~~a~~~   82 (104)
                        ..+|++||++|..
T Consensus        84 ~~g~iD~lv~nag~~   98 (258)
T PRK07370         84 KWGKLDILVHCLAFA   98 (258)
T ss_pred             HcCCCCEEEEccccc
Confidence              3579999999864

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=98.84  E-value=7.6e-09  Score=64.35  Aligned_cols=73  Identities=11%  Similarity=0.283  Sum_probs=51.8

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-ccc-ccccc----cc-cccccccChHHHHHhhc-------cccEE
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSR-TSKLE----IH-KEFQELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~-~~~~~----~~-~~~~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      ++|+|++|++|+++++.|+++|++|.+++|+... ... .....    .. ....|+.+++++.+++.       .+|+|
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            5799999999999999999999999999887522 100 00000    01 11128888888777664       36999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        81 i~~ag~~   87 (239)
T TIGR01830        81 VNNAGIT   87 (239)
T ss_pred             EECCCCC
Confidence            9999974

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.83  E-value=1.3e-08  Score=65.28  Aligned_cols=78  Identities=15%  Similarity=0.092  Sum_probs=54.4

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCC---cccc-cccc-cccccccccChHHHHHhh-------c
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTE---NSRT-SKLE-IHKEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~---~~~~-~~~~-~~~~~~d~~~~~~~~~~~-------~   70 (104)
                      |+.++++||||+  +.||+++++.|++.|+.|++.+|+...   .+.. .... ......|+.|++++.+++       .
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g   82 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG   82 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            456799999996  689999999999999999988887421   1000 0001 111113888888776664       3


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        83 ~iDilVnnAG~~   94 (274)
T PRK08415         83 KIDFIVHSVAFA   94 (274)
T ss_pred             CCCEEEECCccC
Confidence            579999999963

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.83  E-value=1.4e-08  Score=64.05  Aligned_cols=78  Identities=13%  Similarity=0.183  Sum_probs=53.3

Q ss_pred             CCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCcc--------c---c-ccc---c-cccc-cccccChHHH
Q 046878            5 NTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENS--------R---T-SKL---E-IHKE-FQELDEHEKI   65 (104)
Q Consensus         5 ~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~--------~---~-~~~---~-~~~~-~~d~~~~~~~   65 (104)
                      +++++++|+||+|  .+|.++++.|++.|+.|++++|++....        .   . ...   . .... ..|+.+++++
T Consensus         3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   82 (256)
T PRK12748          3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP   82 (256)
T ss_pred             CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            4557899999985  7999999999999999999988732110        0   0 000   0 0111 1288887776


Q ss_pred             HHhhc-------cccEEEEcccCc
Q 046878           66 ISILK-------EVGVVISTVAYP   82 (104)
Q Consensus        66 ~~~~~-------~~d~vv~~a~~~   82 (104)
                      ..+++       .+|+|||++|..
T Consensus        83 ~~~~~~~~~~~g~id~vi~~ag~~  106 (256)
T PRK12748         83 NRVFYAVSERLGDPSILINNAAYS  106 (256)
T ss_pred             HHHHHHHHHhCCCCCEEEECCCcC
Confidence            66543       479999999864

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.83  E-value=1.1e-08  Score=65.34  Aligned_cols=78  Identities=13%  Similarity=0.181  Sum_probs=54.1

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----ccccc-cccccccChHHHHHhh-------c
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLEIH-KEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~~~-~~~~d~~~~~~~~~~~-------~   70 (104)
                      |+.++++|+|++  +.||.++++.|+++|++|++..|+....+..+    ..... ....|+.+++++.+++       .
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            556789999996  78999999999999999988777532111111    11111 1113888888777665       3


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ..|++||++|..
T Consensus        88 ~iD~lv~nAG~~   99 (272)
T PRK08159         88 KLDFVVHAIGFS   99 (272)
T ss_pred             CCcEEEECCccc
Confidence            579999999864

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=98.82  E-value=8.4e-09  Score=65.57  Aligned_cols=75  Identities=13%  Similarity=0.185  Sum_probs=49.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC-Ccccc-ccc------ccccccccccChHHH----HHhh------
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT-ENSRT-SKL------EIHKEFQELDEHEKI----ISIL------   69 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~-~~~~~-~~~------~~~~~~~d~~~~~~~----~~~~------   69 (104)
                      +.++|+||+|+||.++++.|+++|++|+++.|+.. ..+.. ...      .......|+.|++++    .+.+      
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            47899999999999999999999999988766532 22100 000      011111278777644    2222      


Q ss_pred             -ccccEEEEcccCc
Q 046878           70 -KEVGVVISTVAYP   82 (104)
Q Consensus        70 -~~~d~vv~~a~~~   82 (104)
                       ..+|++||++|..
T Consensus        82 ~g~iD~lv~nAG~~   95 (267)
T TIGR02685        82 FGRCDVLVNNASAF   95 (267)
T ss_pred             cCCceEEEECCccC
Confidence             4689999999863

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06940 short chain dehydrogenase; Provisional

Probab=98.82  E-value=3.5e-08  Score=63.13  Aligned_cols=73  Identities=11%  Similarity=0.196  Sum_probs=51.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----ccccc-ccccChHHHHHhhc------cccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKEF-QELDEHEKIISILK------EVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~~-~d~~~~~~~~~~~~------~~d~v   75 (104)
                      +.++|+|+ |+||+++++.|. +|++|++++|+.+..+.. ....    ....+ .|+.|++++.++++      .+|++
T Consensus         3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            57899997 799999999996 799999999976443111 1110    01111 28888887777653      58999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        81 i~nAG~~   87 (275)
T PRK06940         81 VHTAGVS   87 (275)
T ss_pred             EECCCcC
Confidence            9999975

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.82  E-value=3.7e-08  Score=66.01  Aligned_cols=99  Identities=20%  Similarity=0.304  Sum_probs=66.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc---cccc-ccc--ccccChHHHHHhhc----cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK---LEIH-KEF--QELDEHEKIISILK----EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~---~~~~-~~~--~d~~~~~~~~~~~~----~~d~   74 (104)
                      +++.+|+|+||+|.+|+.+++.|+++|+.|.++-|+..+......   .++. +..  .....++.+.....    ...+
T Consensus        77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~  156 (411)
T KOG1203|consen   77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVI  156 (411)
T ss_pred             CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccccee
Confidence            455689999999999999999999999999999998766533222   0110 100  12233344444332    3446


Q ss_pred             EEEcccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           75 VISTVAYPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        75 vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ++-+++...            +.++.++++||..++ ++|++
T Consensus       157 v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~v  197 (411)
T KOG1203|consen  157 VIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVV  197 (411)
T ss_pred             EEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEE
Confidence            666665321            567899999999998 99874

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.82  E-value=1.5e-08  Score=61.95  Aligned_cols=79  Identities=16%  Similarity=0.196  Sum_probs=57.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc----cccccccccChHHHHHhhccccEEEEcc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE----IHKEFQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~----~~~~~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      ++.++++|+|++|.+|+.+++.|...|++|++++|+.++.+.. ....    ......+..+.+++.+++.++|+||++.
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            4567999999999999999999999999999999886443111 0010    0001125667788888899999999988


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      +...
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            7654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.81  E-value=1.7e-08  Score=64.15  Aligned_cols=78  Identities=13%  Similarity=0.095  Sum_probs=53.1

Q ss_pred             CCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----ccc-cccccccccChHHHHHhh-------c
Q 046878            5 NTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLE-IHKEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~-~~~~~~d~~~~~~~~~~~-------~   70 (104)
                      ++.++++|+||  ++.||.++++.|++.|++|.+.+|.....+...    ... ......|+.|++++.+++       .
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD   83 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC
Confidence            45678999996  578999999999999999988765421111110    001 111113888888777765       3


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        84 ~iD~lvnnAG~~   95 (260)
T PRK06997         84 GLDGLVHSIGFA   95 (260)
T ss_pred             CCcEEEEccccC
Confidence            589999999864

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=98.80  E-value=8e-09  Score=61.15  Aligned_cols=76  Identities=16%  Similarity=0.272  Sum_probs=51.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcC--CCCcccc-ccc----cccccc-ccccChHHHHHhh-------cc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYARP--VTENSRT-SKL----EIHKEF-QELDEHEKIISIL-------KE   71 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~--~~~~~~~-~~~----~~~~~~-~d~~~~~~~~~~~-------~~   71 (104)
                      ++++|+||++.+|.+++++|+++| +.|.++.|+  .+..... ...    .....+ .|+.+++++..++       ..
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            478999999999999999999995 577888887  2221110 000    111111 2777877766665       36


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      .|++||++|...
T Consensus        81 ld~li~~ag~~~   92 (167)
T PF00106_consen   81 LDILINNAGIFS   92 (167)
T ss_dssp             ESEEEEECSCTT
T ss_pred             cccccccccccc
Confidence            799999999865

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK07041 short chain dehydrogenase; Provisional

Probab=98.80  E-value=9.8e-09  Score=63.73  Aligned_cols=72  Identities=15%  Similarity=0.243  Sum_probs=52.9

Q ss_pred             EEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc---ccccc-cccccChHHHHHhhc---cccEEEEcccCc
Q 046878           11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL---EIHKE-FQELDEHEKIISILK---EVGVVISTVAYP   82 (104)
Q Consensus        11 ~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~---~~~~~-~~d~~~~~~~~~~~~---~~d~vv~~a~~~   82 (104)
                      +|+|++|++|+++++.|+++|++|.+++|+++...... ..   ..... ..|+.+++++.++++   .+|++||++|..
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~   80 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT   80 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence            58999999999999999999999999999754431110 00   01111 138889888888775   479999999863

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.78  E-value=2.5e-08  Score=63.29  Aligned_cols=78  Identities=12%  Similarity=0.101  Sum_probs=54.1

Q ss_pred             CCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhh-------
Q 046878            4 ENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISIL-------   69 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~-------   69 (104)
                      .|+.+.++||||++  .||.++++.|.++|+.|++.+|+....+.....    ..... ..|+.|++++.+++       
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW   84 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence            36667899999986  799999999999999998887763211000000    11111 13888888777665       


Q ss_pred             ccccEEEEcccC
Q 046878           70 KEVGVVISTVAY   81 (104)
Q Consensus        70 ~~~d~vv~~a~~   81 (104)
                      ..+|++||++|.
T Consensus        85 g~iDilVnnag~   96 (260)
T PRK06603         85 GSFDFLLHGMAF   96 (260)
T ss_pred             CCccEEEEcccc
Confidence            358999999985

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.77  E-value=9.7e-09  Score=67.35  Aligned_cols=89  Identities=21%  Similarity=0.326  Sum_probs=69.3

Q ss_pred             eEEEEccCChhhHHHHHHHHh----CCCeEEEEEcCCCCccc-ccc------c---ccccccccccChHHHHHhhccccE
Q 046878            9 KILIFGGTGYLGKYMVKASVS----SGHNTFVYARPVTENSR-TSK------L---EIHKEFQELDEHEKIISILKEVGV   74 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~----~~~~v~~~~r~~~~~~~-~~~------~---~~~~~~~d~~~~~~~~~~~~~~d~   74 (104)
                      -+.|.||+||.|..+++++..    .+...-+..|++++++. ...      .   ....-+.|..|++++.+..+.+.+
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v   86 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV   86 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence            478999999999999999998    56778899999877631 111      0   001112388999999999999999


Q ss_pred             EEEcccCcChhhHHHHHHHHHHhC
Q 046878           75 VISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        75 vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      |+||+|+..+ .-++++++|.++|
T Consensus        87 ivN~vGPyR~-hGE~VVkacienG  109 (423)
T KOG2733|consen   87 IVNCVGPYRF-HGEPVVKACIENG  109 (423)
T ss_pred             EEecccccee-cCcHHHHHHHHcC
Confidence            9999999764 3468899999887

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=98.77  E-value=2.2e-08  Score=65.15  Aligned_cols=89  Identities=20%  Similarity=0.242  Sum_probs=66.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCcChhhH
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLDQ   87 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~   87 (104)
                      .++|.||+||.|.-++++|..+|....+..|+..+.... ..+......-.+.+++.+.+.+...++|+||+|+.. ...
T Consensus         8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~~~~~~p~~~p~~~~~~~~~~~VVlncvGPyt-~~g   86 (382)
T COG3268           8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGPEAAVFPLGVPAALEAMASRTQVVLNCVGPYT-RYG   86 (382)
T ss_pred             eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCccccccCCCCHHHHHHHHhcceEEEecccccc-ccc
Confidence            689999999999999999999998888889998766311 111111111145668888999999999999999875 344


Q ss_pred             HHHHHHHHHhC
Q 046878           88 LKIVDAIKVAG   98 (104)
Q Consensus        88 ~~l~~~~~~~~   98 (104)
                      ..++++|..++
T Consensus        87 ~plv~aC~~~G   97 (382)
T COG3268          87 EPLVAACAAAG   97 (382)
T ss_pred             cHHHHHHHHhC
Confidence            57888888776

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.74  E-value=6.3e-08  Score=60.59  Aligned_cols=75  Identities=17%  Similarity=0.344  Sum_probs=59.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--cccccccccccChHHHHHh-hccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~   83 (104)
                      |+++|+|+ |.+|..+++.|.+.|++|.++.++++.......  ........|-++++.|.++ +.++|+++.+.+...
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~   78 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE   78 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH
Confidence            47999997 999999999999999999999999876522111  2222222488899999998 899999999998754

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=98.74  E-value=3.4e-08  Score=56.14  Aligned_cols=87  Identities=17%  Similarity=0.287  Sum_probs=48.1

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC-eE-EEEEcCCCCccc-ccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH-NT-FVYARPVTENSR-TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~-~v-~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      ||+|+||||++|+.+++.|.++.. ++ .+++++...... ...........++.-.+.-.+.+.++|+||.|.+...  
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~a~~~~~--   78 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADPEELSDVDVVFLALPHGA--   78 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSGHHHTTESEEEE-SCHHH--
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecchhHhhcCCEEEecCchhH--
Confidence            689999999999999999999653 44 445555422211 1111111111111111111233489999999988643  


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                       ...+...+.+.+
T Consensus        79 -~~~~~~~~~~~g   90 (121)
T PF01118_consen   79 -SKELAPKLLKAG   90 (121)
T ss_dssp             -HHHHHHHHHHTT
T ss_pred             -HHHHHHHHhhCC
Confidence             345555555554

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.73  E-value=3.6e-08  Score=64.89  Aligned_cols=73  Identities=18%  Similarity=0.252  Sum_probs=51.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-C-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-G-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++.++++|+||+|++|+.++++|..+ + ..++++.|+........  .   ++. ..+...+.+.+.++|+|||+++.+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La--~---el~-~~~i~~l~~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ--A---ELG-GGKILSLEEALPEADIVVWVASMP  226 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH--H---Hhc-cccHHhHHHHHccCCEEEECCcCC
Confidence            55689999999999999999999864 4 57888888754431111  1   111 122234667889999999999975


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus       227 ~  227 (340)
T PRK14982        227 K  227 (340)
T ss_pred             c
Confidence            4

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.72  E-value=5.9e-08  Score=64.13  Aligned_cols=91  Identities=15%  Similarity=0.310  Sum_probs=61.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcc---c----cccccc--------cc-cccccc------ChHH
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENS---R----TSKLEI--------HK-EFQELD------EHEK   64 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~---~----~~~~~~--------~~-~~~d~~------~~~~   64 (104)
                      +++++||||||+|..++.+|+.... +|+++-|-.....   .    ......        +. ...|+.      +...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            3799999999999999999997654 8998888654210   0    000001        00 011443      3456


Q ss_pred             HHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhC
Q 046878           65 IISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        65 ~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~   98 (104)
                      +.++...+|.|||+++..+            +.++..+++.|...+
T Consensus        81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk  126 (382)
T COG3320          81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK  126 (382)
T ss_pred             HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC
Confidence            6777788999999998754            567778888776543

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.72  E-value=1.1e-07  Score=62.20  Aligned_cols=79  Identities=11%  Similarity=0.171  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccc---ccc---c-ccccChHHHHHhh-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEI---HKE---F-QELDEHEKIISIL-------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~---~~~---~-~d~~~~~~~~~~~-------   69 (104)
                      +..++++|||++..||.++++.|..+|.+|++..|+.+..... .....   ...   . -|+.+.+++.+..       
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            4457899999999999999999999999999999997443211 11110   011   1 1888877776654       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      ...|++|++||...
T Consensus       113 ~~ldvLInNAGV~~  126 (314)
T KOG1208|consen  113 GPLDVLINNAGVMA  126 (314)
T ss_pred             CCccEEEeCccccc
Confidence            35799999999864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.71  E-value=2.2e-08  Score=58.04  Aligned_cols=77  Identities=17%  Similarity=0.193  Sum_probs=53.6

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCccccccccccccc-ccccChHHHHHhhccccEEEEcccC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRTSKLEIHKEF-QELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ..+.++++|+|+ |..|+.++..|...|.. ++++.|+.++.+...  ...... ..+...+++.+.+.++|+||++.+.
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~--~~~~~~~~~~~~~~~~~~~~~~~DivI~aT~~   85 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALA--EEFGGVNIEAIPLEDLEEALQEADIVINATPS   85 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHH--HHHTGCSEEEEEGGGHCHHHHTESEEEE-SST
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHH--HHcCccccceeeHHHHHHHHhhCCeEEEecCC
Confidence            356789999997 99999999999999975 999999875542111  111100 1233344555778899999999988


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      +.
T Consensus        86 ~~   87 (135)
T PF01488_consen   86 GM   87 (135)
T ss_dssp             TS
T ss_pred             CC
Confidence            75

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PLN02780 ketoreductase/ oxidoreductase

Probab=98.70  E-value=4.3e-08  Score=64.17  Aligned_cols=76  Identities=22%  Similarity=0.285  Sum_probs=50.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-------ccccccccccC--hH---HHHHhhcc--
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-------EIHKEFQELDE--HE---KIISILKE--   71 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-------~~~~~~~d~~~--~~---~~~~~~~~--   71 (104)
                      .++++||||+|.+|.+++++|+++|++|.+++|++++.+.. ...       .......|+.+  .+   .+.+.+.+  
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d  132 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD  132 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999999999987654211 000       00000115543  22   33344444  


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus       133 idilVnnAG~~  143 (320)
T PLN02780        133 VGVLINNVGVS  143 (320)
T ss_pred             ccEEEEecCcC
Confidence            56999999864

>PRK05599 hypothetical protein; Provisional

Probab=98.70  E-value=3.8e-08  Score=62.00  Aligned_cols=74  Identities=16%  Similarity=0.226  Sum_probs=52.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccccc-ccccChHHHHHhh-------cccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEF-QELDEHEKIISIL-------KEVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~-~d~~~~~~~~~~~-------~~~d   73 (104)
                      |+++|+||++.+|.++++.|. .|+.|.+++|+.++.+.. ...     .....+ .|+.|++++.+++       .+.|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            468999999999999999998 589999999886544211 000     001111 2788877776654       3579


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        80 ~lv~nag~~   88 (246)
T PRK05599         80 LAVVAFGIL   88 (246)
T ss_pred             EEEEecCcC
Confidence            999999974

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.69  E-value=1.6e-07  Score=63.20  Aligned_cols=74  Identities=15%  Similarity=0.337  Sum_probs=55.0

Q ss_pred             CCCCeEEEEcc----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh
Q 046878            5 NTKPKILIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI   68 (104)
Q Consensus         5 ~~~~~i~i~Ga----------------~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   68 (104)
                      ++.++++|+||                +|.+|.++++.|..+|++|++++++.. ...+...    ...|+.+.+++.+.
T Consensus       186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~~~~~----~~~dv~~~~~~~~~  260 (399)
T PRK05579        186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPTPAGV----KRIDVESAQEMLDA  260 (399)
T ss_pred             cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccCCCCc----EEEccCCHHHHHHH
Confidence            56789999999                899999999999999999999987653 2111111    12366676666555


Q ss_pred             h----ccccEEEEcccCcC
Q 046878           69 L----KEVGVVISTVAYPQ   83 (104)
Q Consensus        69 ~----~~~d~vv~~a~~~~   83 (104)
                      +    .++|++||+||...
T Consensus       261 v~~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        261 VLAALPQADIFIMAAAVAD  279 (399)
T ss_pred             HHHhcCCCCEEEEcccccc
Confidence            4    56899999999865

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=98.68  E-value=4e-08  Score=61.31  Aligned_cols=73  Identities=11%  Similarity=0.145  Sum_probs=50.6

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc----ccccc-cccccChHHHHHhhc-------cccEE
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL----EIHKE-FQELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~----~~~~~-~~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      ++|+|++|++|.++++.|.++|+++.+++|+.... +. ....    ..... ..|+.+++++.++++       ..|.+
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999998888764321 10 0000    00111 128888887766653       46999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      +|++|..
T Consensus        81 i~~ag~~   87 (239)
T TIGR01831        81 VLNAGIT   87 (239)
T ss_pred             EECCCCC
Confidence            9999863

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05086 malate dehydrogenase; Provisional

Probab=98.68  E-value=1.7e-07  Score=61.33  Aligned_cols=92  Identities=13%  Similarity=0.148  Sum_probs=56.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHh-C--CCeEEEEEcCCCCccccccccccc-c-cccc--cChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVS-S--GHNTFVYARPVTENSRTSKLEIHK-E-FQEL--DEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~-~--~~~v~~~~r~~~~~~~~~~~~~~~-~-~~d~--~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      +|++|+||+|.+|++++..|.. .  ++++.++++++...  ....+... . ...+  .+.+++.+.++++|+||.++|
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~--g~alDl~~~~~~~~i~~~~~~d~~~~l~~~DiVIitaG   78 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTP--GVAVDLSHIPTAVKIKGFSGEDPTPALEGADVVLISAG   78 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCc--ceehhhhcCCCCceEEEeCCCCHHHHcCCCCEEEEcCC
Confidence            5899999999999999998854 2  35778888764321  00011000 0 0011  113455677889999999999


Q ss_pred             CcCh-------------hhHHHHHHHHHHhCCccc
Q 046878           81 YPQL-------------LDQLKIVDAIKVAGNIKV  102 (104)
Q Consensus        81 ~~~~-------------~~~~~l~~~~~~~~~v~~  102 (104)
                      ...-             .....+++.+.+.+ .++
T Consensus        79 ~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~  112 (312)
T PRK05086         79 VARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKA  112 (312)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCe
Confidence            8541             12345666666664 444

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.66  E-value=3.3e-07  Score=62.44  Aligned_cols=93  Identities=18%  Similarity=0.334  Sum_probs=60.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC---CeEEEEEcCCCCcccccc--------------------ccccccc-ccccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTENSRTSK--------------------LEIHKEF-QELDE   61 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~r~~~~~~~~~~--------------------~~~~~~~-~d~~~   61 (104)
                      +.++|+|||||||+|+-+++.|+...   ..++++-|.....+..+.                    ......+ .|+.+
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~   90 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE   90 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence            45799999999999999999998754   357787776544321000                    0111111 13333


Q ss_pred             ------hHHHHHhhccccEEEEcccCcC------------hhhHHHHHHHHHHhC
Q 046878           62 ------HEKIISILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        62 ------~~~~~~~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~   98 (104)
                            +..+.....++|+|||+|+...            ..++.++++.|++..
T Consensus        91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~  145 (467)
T KOG1221|consen   91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMV  145 (467)
T ss_pred             cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhh
Confidence                  2344556788999999999865            345667777776553

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=98.65  E-value=3.1e-07  Score=58.09  Aligned_cols=79  Identities=13%  Similarity=0.181  Sum_probs=52.6

Q ss_pred             CCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCC--------cccc----cccc----cc-cccccccChHH
Q 046878            4 ENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTE--------NSRT----SKLE----IH-KEFQELDEHEK   64 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~--------~~~~----~~~~----~~-~~~~d~~~~~~   64 (104)
                      .++.++++|+||+|  .+|.+++++|+++|++|++.+|+...        ....    ....    .. ....|+.+.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            46678999999985  89999999999999998887543110        0000    0000    00 11127888887


Q ss_pred             HHHhhc-------cccEEEEcccCc
Q 046878           65 IISILK-------EVGVVISTVAYP   82 (104)
Q Consensus        65 ~~~~~~-------~~d~vv~~a~~~   82 (104)
                      +.+++.       +.|++||++|..
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~  107 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYS  107 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCC
Confidence            776653       479999999864

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=98.63  E-value=9.4e-08  Score=60.44  Aligned_cols=73  Identities=14%  Similarity=0.191  Sum_probs=50.9

Q ss_pred             eEEEEccCChhhHHHHHHHHh----CCCeEEEEEcCCCCcccc-ccc-------ccccccccccChHHHHHhhcc-----
Q 046878            9 KILIFGGTGYLGKYMVKASVS----SGHNTFVYARPVTENSRT-SKL-------EIHKEFQELDEHEKIISILKE-----   71 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~----~~~~v~~~~r~~~~~~~~-~~~-------~~~~~~~d~~~~~~~~~~~~~-----   71 (104)
                      .++|+||++.+|.+++++|.+    .|+.|.+++|+.+..+.. ...       .......|+.+++++.++++.     
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999986    689999999986543211 000       001111288888877766532     


Q ss_pred             ------ccEEEEcccC
Q 046878           72 ------VGVVISTVAY   81 (104)
Q Consensus        72 ------~d~vv~~a~~   81 (104)
                            .|++||++|.
T Consensus        82 g~~~~~~~~lv~nAG~   97 (256)
T TIGR01500        82 RPKGLQRLLLINNAGT   97 (256)
T ss_pred             ccCCCceEEEEeCCcc
Confidence                  2589999986

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.62  E-value=1.8e-07  Score=58.65  Aligned_cols=71  Identities=21%  Similarity=0.363  Sum_probs=46.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccC----hHHHHHhhccccEEEEcccCcC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDE----HEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~----~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++--.++|++|.++++.|+++|++|+++.|+...... +......    .+..    .+.+.+.++++|+|||+||...
T Consensus        18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~v~~i----~v~s~~~m~~~l~~~~~~~DivIh~AAvsd   93 (229)
T PRK06732         18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPNLSII----EIENVDDLLETLEPLVKDHDVLIHSMAVSD   93 (229)
T ss_pred             eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCCeEEE----EEecHHHHHHHHHHHhcCCCEEEeCCccCC
Confidence            33333568999999999999999999999876432210 1111111    1222    2355566778999999999865

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=98.62  E-value=1.5e-07  Score=69.37  Aligned_cols=89  Identities=17%  Similarity=0.199  Sum_probs=61.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC-Ce-------------EEEEEcCCCCcccc-ccccccc-ccccccChHHHHHhh
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG-HN-------------TFVYARPVTENSRT-SKLEIHK-EFQELDEHEKIISIL   69 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~-------------v~~~~r~~~~~~~~-~~~~~~~-~~~d~~~~~~~~~~~   69 (104)
                      ++++|+|+|| |++|+..++.|.+.+ .+             |.+.+++....+.. ....... ...|+.|.+++.+++
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v  646 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYV  646 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhh
Confidence            3568999997 999999999998753 33             66666665433111 1111111 112788999999999


Q ss_pred             ccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           70 KEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        70 ~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      +++|+|++++++..   +..++++|.+++
T Consensus       647 ~~~DaVIsalP~~~---H~~VAkaAieaG  672 (1042)
T PLN02819        647 SQVDVVISLLPASC---HAVVAKACIELK  672 (1042)
T ss_pred             cCCCEEEECCCchh---hHHHHHHHHHcC
Confidence            99999999999853   466777777766

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=98.61  E-value=2.6e-07  Score=58.08  Aligned_cols=78  Identities=13%  Similarity=0.279  Sum_probs=53.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC--cccc-cccc-----ccccc-ccccC-hHHHHHhh-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE--NSRT-SKLE-----IHKEF-QELDE-HEKIISIL-----   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~--~~~~-~~~~-----~~~~~-~d~~~-~~~~~~~~-----   69 (104)
                      +++++++|||+++.+|.++++.|.+.|+.++++.++...  .+.. ....     ..... .|+.+ .+++..++     
T Consensus         3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~   82 (251)
T COG1028           3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE   82 (251)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999998888877543  1100 0011     11111 27776 66655543     


Q ss_pred             --ccccEEEEcccCc
Q 046878           70 --KEVGVVISTVAYP   82 (104)
Q Consensus        70 --~~~d~vv~~a~~~   82 (104)
                        .++|+++|++|..
T Consensus        83 ~~g~id~lvnnAg~~   97 (251)
T COG1028          83 EFGRIDILVNNAGIA   97 (251)
T ss_pred             HcCCCCEEEECCCCC
Confidence              3489999999974

>PLN00015 protochlorophyllide reductase

Probab=98.57  E-value=9.6e-08  Score=62.09  Aligned_cols=72  Identities=17%  Similarity=0.250  Sum_probs=50.8

Q ss_pred             EEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-ccc----ccccc-cccccChHHHHHhh-------ccccEEE
Q 046878           11 LIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKL----EIHKE-FQELDEHEKIISIL-------KEVGVVI   76 (104)
Q Consensus        11 ~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~----~~~~~-~~d~~~~~~~~~~~-------~~~d~vv   76 (104)
                      +||||++.+|.++++.|+++| +.|++.+|+.+..... ...    ..... ..|+.+.+++.+++       ..+|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            589999999999999999999 9999998876443110 000    01111 12888888776654       3579999


Q ss_pred             EcccCc
Q 046878           77 STVAYP   82 (104)
Q Consensus        77 ~~a~~~   82 (104)
                      |++|..
T Consensus        81 nnAG~~   86 (308)
T PLN00015         81 CNAAVY   86 (308)
T ss_pred             ECCCcC
Confidence            999863

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=98.56  E-value=8.1e-07  Score=50.78  Aligned_cols=88  Identities=16%  Similarity=0.160  Sum_probs=49.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHh-CCCeEEEE-EcCCCCcccccccccccc-cccccChHHHHHhhccccEEEEcccCcCh
Q 046878            8 PKILIFGGTGYLGKYMVKASVS-SGHNTFVY-ARPVTENSRTSKLEIHKE-FQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~-~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      ++|+|.|++|.+|+.+++.+.+ .+.++... +|+++.....+.-+.... .....-.+++.+++..+|++|.+.-+   
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT~p---   77 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFTNP---   77 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES-H---
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhcccCCEEEEcCCh---
Confidence            3799999999999999999998 56775544 455422211000000000 01222235567777778888888843   


Q ss_pred             hhHHHHHHHHHHhC
Q 046878           85 LDQLKIVDAIKVAG   98 (104)
Q Consensus        85 ~~~~~l~~~~~~~~   98 (104)
                      ......++.+.+++
T Consensus        78 ~~~~~~~~~~~~~g   91 (124)
T PF01113_consen   78 DAVYDNLEYALKHG   91 (124)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHhHHHHHHHHhCC
Confidence            33445555555554

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=98.55  E-value=5e-07  Score=59.62  Aligned_cols=83  Identities=14%  Similarity=0.136  Sum_probs=49.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      ++|+|+||+|++|+.+++.|.+++|+   +..+.+.....+..........+.|..+     ..+.++|+||.++|... 
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~g~~i~v~d~~~-----~~~~~vDvVf~A~g~g~-   75 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFKGKELKVEDLTT-----FDFSGVDIALFSAGGSV-   75 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeCCceeEEeeCCH-----HHHcCCCEEEECCChHH-
Confidence            58999999999999999999997765   4666655433211111010011113322     13468999999987653 


Q ss_pred             hhHHHHHHHHHHhC
Q 046878           85 LDQLKIVDAIKVAG   98 (104)
Q Consensus        85 ~~~~~l~~~~~~~~   98 (104)
                        ...++....+++
T Consensus        76 --s~~~~~~~~~~G   87 (334)
T PRK14874         76 --SKKYAPKAAAAG   87 (334)
T ss_pred             --HHHHHHHHHhCC
Confidence              344444444444

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=98.53  E-value=6.2e-07  Score=59.37  Aligned_cols=86  Identities=15%  Similarity=0.196  Sum_probs=52.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccc-ccccccccc-c-cccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRT-SKLEIHKEF-Q-ELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~-~~~~~~~~~-~-d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++|+|+||+|++|+.+++.|.++ +.++..+.++....+.. ....+.... . ++.+.+..  .+.++|+||.|++.. 
T Consensus         3 ~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP~~-   79 (343)
T PRK00436          3 IKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALPHG-   79 (343)
T ss_pred             eEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCCcH-
Confidence            68999999999999999999976 45776665543222111 111111111 1 23333322  457899999988864 


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                        ....++..+.+++
T Consensus        80 --~~~~~v~~a~~aG   92 (343)
T PRK00436         80 --VSMDLAPQLLEAG   92 (343)
T ss_pred             --HHHHHHHHHHhCC
Confidence              3456666665555

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.53  E-value=1.4e-06  Score=57.48  Aligned_cols=84  Identities=14%  Similarity=0.213  Sum_probs=49.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      |.+|+|+||||++|+.+++.|.+++++   +..+.......+... ... .. -++.+.+.. + ++++|++|.+++.. 
T Consensus         4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~-~~~-~~-l~~~~~~~~-~-~~~vD~vFla~p~~-   77 (336)
T PRK05671          4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVP-FAG-KN-LRVREVDSF-D-FSQVQLAFFAAGAA-   77 (336)
T ss_pred             CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeec-cCC-cc-eEEeeCChH-H-hcCCCEEEEcCCHH-
Confidence            368999999999999999999977654   334433322111111 110 00 122222221 1 47899999999843 


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                        ....+++.+.+++
T Consensus        78 --~s~~~v~~~~~~G   90 (336)
T PRK05671         78 --VSRSFAEKARAAG   90 (336)
T ss_pred             --HHHHHHHHHHHCC
Confidence              3355777766665

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=98.53  E-value=4.4e-07  Score=58.24  Aligned_cols=80  Identities=10%  Similarity=0.204  Sum_probs=56.9

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc------c---ccccccccccChHHHHHh------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK------L---EIHKEFQELDEHEKIISI------   68 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~------~---~~~~~~~d~~~~~~~~~~------   68 (104)
                      .++.+.++|||++..||++++..|.+.|.+|++.+|+.+..+...+      .   .......|+.+.+...++      
T Consensus         5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~   84 (270)
T KOG0725|consen    5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE   84 (270)
T ss_pred             cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence            3566889999999999999999999999999999999776421110      0   011112267665544333      


Q ss_pred             --hccccEEEEcccCcC
Q 046878           69 --LKEVGVVISTVAYPQ   83 (104)
Q Consensus        69 --~~~~d~vv~~a~~~~   83 (104)
                        +...|+++|++|...
T Consensus        85 ~~~GkidiLvnnag~~~  101 (270)
T KOG0725|consen   85 KFFGKIDILVNNAGALG  101 (270)
T ss_pred             HhCCCCCEEEEcCCcCC
Confidence              346899999999865

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.52  E-value=3e-07  Score=61.62  Aligned_cols=84  Identities=15%  Similarity=0.229  Sum_probs=50.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccccc-ccccccccccccChHHHH-HhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKII-SILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~-~~~~~~d~vv~~a~~~~   83 (104)
                      +++|+|+||||++|+.+++.|..+. .++..+.++....+... ...+... .+..+.+.+. ..++++|+||.+++.. 
T Consensus        38 ~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~~l~~-~~~~~~~~~~~~~~~~~DvVf~Alp~~-  115 (381)
T PLN02968         38 KKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFPHLIT-QDLPNLVAVKDADFSDVDAVFCCLPHG-  115 (381)
T ss_pred             ccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCccccC-ccccceecCCHHHhcCCCEEEEcCCHH-
Confidence            4589999999999999999999884 57888777543321111 1111110 1121111122 1257899999988764 


Q ss_pred             hhhHHHHHHHH
Q 046878           84 LLDQLKIVDAI   94 (104)
Q Consensus        84 ~~~~~~l~~~~   94 (104)
                        ...+++..+
T Consensus       116 --~s~~i~~~~  124 (381)
T PLN02968        116 --TTQEIIKAL  124 (381)
T ss_pred             --HHHHHHHHH
Confidence              345555554

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=98.52  E-value=9.4e-08  Score=56.97  Aligned_cols=37  Identities=27%  Similarity=0.360  Sum_probs=31.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |++|.++|. |.+|+.+++.|.++|++|++.+|++++.
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~   37 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKA   37 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhh
Confidence            468999996 9999999999999999999999987554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=98.47  E-value=3.8e-07  Score=58.95  Aligned_cols=76  Identities=17%  Similarity=0.309  Sum_probs=54.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-------cccccccccccChHH----HHHhhcc--ccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-------LEIHKEFQELDEHEK----IISILKE--VGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-------~~~~~~~~d~~~~~~----~~~~~~~--~d~   74 (104)
                      ....|+|||..||++.+++|+.+|.+|++++|+.++++...+       .+......|+++++.    +.+.+.+  +.+
T Consensus        50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI  129 (312)
T KOG1014|consen   50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI  129 (312)
T ss_pred             CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence            567999999999999999999999999999999888742111       111111126666553    5555554  568


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||++|...
T Consensus       130 LVNNvG~~~  138 (312)
T KOG1014|consen  130 LVNNVGMSY  138 (312)
T ss_pred             EEecccccC
Confidence            999999865

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=98.45  E-value=4.3e-07  Score=59.37  Aligned_cols=76  Identities=17%  Similarity=0.276  Sum_probs=54.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc----cccccccccc---cccChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----SKLEIHKEFQ---ELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~----~~~~~~~~~~---d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      ++|.|+|+ |.+|++|+..|.++|++|+++.|+++.....    .+...++.+.   ++.-..++.++++++|+|+...+
T Consensus         2 ~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~avP   80 (329)
T COG0240           2 MKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAVP   80 (329)
T ss_pred             ceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEECC
Confidence            58999997 9999999999999999999999986543211    1111222111   34445567888999999999888


Q ss_pred             CcCh
Q 046878           81 YPQL   84 (104)
Q Consensus        81 ~~~~   84 (104)
                      ...+
T Consensus        81 s~~~   84 (329)
T COG0240          81 SQAL   84 (329)
T ss_pred             hHHH
Confidence            7553

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=98.45  E-value=1.8e-06  Score=55.03  Aligned_cols=81  Identities=15%  Similarity=0.223  Sum_probs=49.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      ++|+|+|++|.+|+.+++.+.+. +.++..+ +++++.....   ..    .++...+++.+++.++|+|+.++.+..  
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~---~~----~~i~~~~dl~~ll~~~DvVid~t~p~~--   72 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ---GA----LGVAITDDLEAVLADADVLIDFTTPEA--   72 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc---CC----CCccccCCHHHhccCCCEEEECCCHHH--
Confidence            58999999999999999888764 4676654 4444322111   10    112222334555667899998886543  


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                       ...++..+.+++
T Consensus        73 -~~~~~~~al~~G   84 (257)
T PRK00048         73 -TLENLEFALEHG   84 (257)
T ss_pred             -HHHHHHHHHHcC
Confidence             245555555554

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=98.45  E-value=4.6e-07  Score=56.47  Aligned_cols=79  Identities=16%  Similarity=0.231  Sum_probs=58.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc-------ccccChHHHHHhh-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF-------QELDEHEKIISIL-------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-------~d~~~~~~~~~~~-------~   70 (104)
                      .+.+.++++|+.|.||.++.++|+.+|..+.++..+.+..+...+++...+.       -|+.+..++++.+       .
T Consensus         3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg   82 (261)
T KOG4169|consen    3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFG   82 (261)
T ss_pred             ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhC
Confidence            3567899999999999999999999999888888777665322222211111       1787777776665       4


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ..|++||.||...
T Consensus        83 ~iDIlINgAGi~~   95 (261)
T KOG4169|consen   83 TIDILINGAGILD   95 (261)
T ss_pred             ceEEEEccccccc
Confidence            6799999999865

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=98.44  E-value=2.2e-07  Score=55.09  Aligned_cols=75  Identities=15%  Similarity=0.297  Sum_probs=49.0

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccccc---cccChHHHHHhhccccEEEEcccC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKEFQ---ELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~~~---d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ||.|+|| |.+|.+++..|..+|++|+++.|+++..+.....    ...+...   .+.-..+++++++++|+|+.+.+.
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavPs   79 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVPS   79 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-G
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEecccH
Confidence            6899997 9999999999999999999999986443211110    0111100   122234567788999999988887


Q ss_pred             cCh
Q 046878           82 PQL   84 (104)
Q Consensus        82 ~~~   84 (104)
                      ...
T Consensus        80 ~~~   82 (157)
T PF01210_consen   80 QAH   82 (157)
T ss_dssp             GGH
T ss_pred             HHH
Confidence            653

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=98.42  E-value=3.1e-06  Score=54.93  Aligned_cols=77  Identities=12%  Similarity=0.155  Sum_probs=55.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc---cccccccc-cccChHHHHHhhc---------cc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK---LEIHKEFQ-ELDEHEKIISILK---------EV   72 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~---~~~~~~~~-d~~~~~~~~~~~~---------~~   72 (104)
                      ..+.|+||||...+|..++++|.+.|+.|.+..-.++..+....   ......+. |+++++++.++.+         +.
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL  107 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL  107 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence            44679999999999999999999999999988855443211111   11111122 8999999888753         35


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      -.+||+||..
T Consensus       108 wglVNNAGi~  117 (322)
T KOG1610|consen  108 WGLVNNAGIS  117 (322)
T ss_pred             eeEEeccccc
Confidence            6899999964

>cd00704 MDH Malate dehydrogenase

Probab=98.41  E-value=3.4e-06  Score=55.48  Aligned_cols=74  Identities=19%  Similarity=0.234  Sum_probs=47.8

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCC--CCcccccccccccc----cccccChHHHHHhhccccEE
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPV--TENSRTSKLEIHKE----FQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~--~~~~~~~~~~~~~~----~~d~~~~~~~~~~~~~~d~v   75 (104)
                      ||.|+||+|.+|+.++..|...+.       ++.+++++.  +..+ ....+....    ..+..-.....+.++++|+|
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~-g~~~Dl~d~~~~~~~~~~i~~~~~~~~~~aDiV   80 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALE-GVVMELQDCAFPLLKGVVITTDPEEAFKDVDVA   80 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccc-eeeeehhhhcccccCCcEEecChHHHhCCCCEE
Confidence            799999999999999999987552       488888875  3221 001110000    00011013456788999999


Q ss_pred             EEcccCcC
Q 046878           76 ISTVAYPQ   83 (104)
Q Consensus        76 v~~a~~~~   83 (104)
                      |+++|.+.
T Consensus        81 VitAG~~~   88 (323)
T cd00704          81 ILVGAFPR   88 (323)
T ss_pred             EEeCCCCC
Confidence            99999865

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=98.41  E-value=1.4e-06  Score=52.65  Aligned_cols=69  Identities=14%  Similarity=0.134  Sum_probs=46.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ...++++|+|. |.||+++++.|..-|.+|.+.+|+.....   ....     ......++.++++.+|+|+.+.+..
T Consensus        34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~---~~~~-----~~~~~~~l~ell~~aDiv~~~~plt  102 (178)
T PF02826_consen   34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE---GADE-----FGVEYVSLDELLAQADIVSLHLPLT  102 (178)
T ss_dssp             STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH---HHHH-----TTEEESSHHHHHHH-SEEEE-SSSS
T ss_pred             cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh---hccc-----ccceeeehhhhcchhhhhhhhhccc
Confidence            45689999996 99999999999999999999999875431   0000     0112234556677778777777643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=98.41  E-value=1.3e-06  Score=53.86  Aligned_cols=74  Identities=16%  Similarity=0.170  Sum_probs=49.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      ||++.|+| +|.+|..++..|...||+|.+.+|+.++..........+    .-..-+..++.+.+|+||-..+.....
T Consensus         1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~----~i~~~~~~dA~~~aDVVvLAVP~~a~~   74 (211)
T COG2085           1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGP----LITGGSNEDAAALADVVVLAVPFEAIP   74 (211)
T ss_pred             CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhcc----ccccCChHHHHhcCCEEEEeccHHHHH
Confidence            45788888 599999999999999999999977765431111111111    112223456677899999888876543

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=98.39  E-value=1.4e-06  Score=55.99  Aligned_cols=75  Identities=13%  Similarity=0.121  Sum_probs=45.6

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhC--CCeEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEE
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSS--GHNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      |++ |++++|.|+|+ |.+|+.+++.|...  ++++..+ +|++++.+..  ........-+.+.   .+++.++|+|+-
T Consensus         1 ~~~-m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~--a~~~g~~~~~~~~---eell~~~D~Vvi   73 (271)
T PRK13302          1 MSS-RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADF--IWGLRRPPPVVPL---DQLATHADIVVE   73 (271)
T ss_pred             CCC-CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHH--HHhcCCCcccCCH---HHHhcCCCEEEE
Confidence            555 67789999996 99999999999863  5676644 4444322110  0111100112333   334567899999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      +++..
T Consensus        74 ~tp~~   78 (271)
T PRK13302         74 AAPAS   78 (271)
T ss_pred             CCCcH
Confidence            98864

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=98.38  E-value=3.7e-06  Score=47.16  Aligned_cols=85  Identities=13%  Similarity=0.182  Sum_probs=58.2

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChhhHH
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLLDQL   88 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~~~~   88 (104)
                      |+|+|. |.+|+.+++.|.+.+.++++++++++..+............|..+++.+.++ +.+++.++.+.+..  ....
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d--~~n~   77 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDD--EENL   77 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSH--HHHH
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccccccccchhhhHHhhcCccccCEEEEccCCH--HHHH
Confidence            578997 9999999999999777999999997665322222211222489999999887 78899999888753  2233


Q ss_pred             HHHHHHHHh
Q 046878           89 KIVDAIKVA   97 (104)
Q Consensus        89 ~l~~~~~~~   97 (104)
                      .++..+++.
T Consensus        78 ~~~~~~r~~   86 (116)
T PF02254_consen   78 LIALLAREL   86 (116)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            444455543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.38  E-value=1.1e-06  Score=56.94  Aligned_cols=77  Identities=12%  Similarity=0.194  Sum_probs=53.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCC---Ccccc-cccc----c-ccccccccChHHHHHhhccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVT---ENSRT-SKLE----I-HKEFQELDEHEKIISILKEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~---~~~~~-~~~~----~-~~~~~d~~~~~~~~~~~~~~d~   74 (104)
                      ++.++++|+|+ |.+|++++..|...|.. |++++|+.+   +.+.. +...    . .....|+.+.+.+.+.+..+|+
T Consensus       124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di  202 (289)
T PRK12548        124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI  202 (289)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence            34568999998 89999999999999975 999999862   22110 0000    0 0011256666677777888999


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+.+..
T Consensus       203 lINaTp~G  210 (289)
T PRK12548        203 LVNATLVG  210 (289)
T ss_pred             EEEeCCCC
Confidence            99999754

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.37  E-value=2.6e-06  Score=51.86  Aligned_cols=65  Identities=12%  Similarity=0.283  Sum_probs=38.7

Q ss_pred             ccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChH----HHHHhhccccEEEEcccCcC
Q 046878           14 GGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE----KIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus        14 Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~~~~d~vv~~a~~~~   83 (104)
                      .+||.+|.++++++..+|++|+++.... ..+.+......    ++...+    .+.+.++++|++|++|+.++
T Consensus        26 ~SSG~~G~~lA~~~~~~Ga~V~li~g~~-~~~~p~~~~~i----~v~sa~em~~~~~~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   26 RSSGKMGAALAEEAARRGAEVTLIHGPS-SLPPPPGVKVI----RVESAEEMLEAVKELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             S--SHHHHHHHHHHHHTT-EEEEEE-TT-S----TTEEEE----E-SSHHHHHHHHHHHGGGGSEEEE-SB--S
T ss_pred             CCcCHHHHHHHHHHHHCCCEEEEEecCc-cccccccceEE----EecchhhhhhhhccccCcceeEEEecchhh
Confidence            4679999999999999999999888774 22122222222    233433    44455678899999999877

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=98.37  E-value=7.3e-06  Score=50.30  Aligned_cols=77  Identities=12%  Similarity=0.194  Sum_probs=53.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc----ccccccccccc-cccChHHHHH-------hhccccE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR----TSKLEIHKEFQ-ELDEHEKIIS-------ILKEVGV   74 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~----~~~~~~~~~~~-d~~~~~~~~~-------~~~~~d~   74 (104)
                      .+...++|++..||++++..|...|+++.+.+++....+.    .........+. |+.+++.+..       .+..+++
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv   93 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV   93 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence            3578999999999999999999999999999887654321    11111111122 6666554443       3456899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      ++||||+..
T Consensus        94 lVncAGItr  102 (256)
T KOG1200|consen   94 LVNCAGITR  102 (256)
T ss_pred             EEEcCcccc
Confidence            999999975

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=98.35  E-value=2.5e-06  Score=55.61  Aligned_cols=36  Identities=19%  Similarity=0.180  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            4 ENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         4 ~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      .++.++++|||+  +..||.++++.|.+.|.+|.+ .|+
T Consensus         6 ~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~   43 (303)
T PLN02730          6 DLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW   43 (303)
T ss_pred             CCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence            467789999999  799999999999999999887 443

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=98.35  E-value=8.7e-07  Score=48.17  Aligned_cols=72  Identities=24%  Similarity=0.338  Sum_probs=46.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhCC---CeEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            9 KILIFGGTGYLGKYMVKASVSSG---HNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      ||.++|+ |.+|+++++.|.+.|   +++.++ .|++++.....  .... . .... .+..++++++|+||.+..+..+
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~--~~~~-~-~~~~-~~~~~~~~~advvilav~p~~~   74 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELA--KEYG-V-QATA-DDNEEAAQEADVVILAVKPQQL   74 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHH--HHCT-T-EEES-EEHHHHHHHTSEEEE-S-GGGH
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHH--Hhhc-c-cccc-CChHHhhccCCEEEEEECHHHH
Confidence            6889995 999999999999999   788866 77765442111  1111 0 0111 1235667799999999998875


Q ss_pred             hh
Q 046878           85 LD   86 (104)
Q Consensus        85 ~~   86 (104)
                      ..
T Consensus        75 ~~   76 (96)
T PF03807_consen   75 PE   76 (96)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.34  E-value=1.5e-06  Score=52.47  Aligned_cols=83  Identities=16%  Similarity=0.201  Sum_probs=62.8

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--ccccccc-ccccChHHHHHhhc---cccE
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIHKEF-QELDEHEKIISILK---EVGV   74 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~~~~-~d~~~~~~~~~~~~---~~d~   74 (104)
                      |+..+..+.++++|+.-.||+.++..|.+.|.+|..+.|.+......-.  ...+..+ .|+.+.+.+.+.+.   ..|.
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidg   80 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDG   80 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhh
Confidence            5556677889999998889999999999999999999999876632111  1112222 38888888888774   4699


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      ++|+||..-
T Consensus        81 LVNNAgvA~   89 (245)
T KOG1207|consen   81 LVNNAGVAT   89 (245)
T ss_pred             hhccchhhh
Confidence            999999754

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.34  E-value=6.6e-07  Score=52.24  Aligned_cols=75  Identities=16%  Similarity=0.204  Sum_probs=48.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc----ccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR----TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +||.|+|++|.+|++++..|...+  .++.++++++...+.    ..+...... .+..-.....+.++++|+|+.++|.
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~-~~~~i~~~~~~~~~~aDivvitag~   79 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLP-SPVRITSGDYEALKDADIVVITAGV   79 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGST-EEEEEEESSGGGGTTESEEEETTST
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcc-cccccccccccccccccEEEEeccc
Confidence            489999999999999999999877  479999988643310    000000000 0000011224557899999999998


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      +.
T Consensus        80 ~~   81 (141)
T PF00056_consen   80 PR   81 (141)
T ss_dssp             SS
T ss_pred             cc
Confidence            65

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=98.34  E-value=4.8e-06  Score=50.01  Aligned_cols=58  Identities=17%  Similarity=0.268  Sum_probs=45.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+|+++.+|..+++.|.+.|..|+++.|+.                     +++.+.+.++|+||.+.+.+.
T Consensus        42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~---------------------~~l~~~l~~aDiVIsat~~~~   99 (168)
T cd01080          42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT---------------------KNLKEHTKQADIVIVAVGKPG   99 (168)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc---------------------hhHHHHHhhCCEEEEcCCCCc
Confidence            5668999999844579999999999998888888763                     234556778888888888754

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=98.33  E-value=2.5e-06  Score=56.63  Aligned_cols=87  Identities=14%  Similarity=0.191  Sum_probs=50.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEE-EcCCCCcccc-ccccccccc-c-cccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVY-ARPVTENSRT-SKLEIHKEF-Q-ELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~-~r~~~~~~~~-~~~~~~~~~-~-d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++|+|+||||++|+.+++.|.++. .++..+ +++....+.. ....+.... . ++.+. +..+.+.++|+||.|++..
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~   79 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG   79 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence            479999999999999999999763 466633 4333221111 111111111 1 12211 1233345899999999865


Q ss_pred             ChhhHHHHHHHHHHhC
Q 046878           83 QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~   98 (104)
                      .   ...++..+.+++
T Consensus        80 ~---s~~~~~~~~~~G   92 (346)
T TIGR01850        80 V---SAELAPELLAAG   92 (346)
T ss_pred             H---HHHHHHHHHhCC
Confidence            3   456666665555

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=98.31  E-value=9.3e-06  Score=53.88  Aligned_cols=86  Identities=14%  Similarity=0.144  Sum_probs=48.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      -.+.+|+|+||+|++|+.+++.|.+++|+   +..+.......+..........+.++. +    +.+.++|+||.++|.
T Consensus         5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~~~~~~v~~~~-~----~~~~~~D~vf~a~p~   79 (344)
T PLN02383          5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFEGRDYTVEELT-E----DSFDGVDIALFSAGG   79 (344)
T ss_pred             CCCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeecCceeEEEeCC-H----HHHcCCCEEEECCCc
Confidence            34568999999999999999999987764   333332221110111111001111221 1    234789999999986


Q ss_pred             cChhhHHHHHHHHHHhC
Q 046878           82 PQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        82 ~~~~~~~~l~~~~~~~~   98 (104)
                      ..   ...++..+.+.+
T Consensus        80 ~~---s~~~~~~~~~~g   93 (344)
T PLN02383         80 SI---SKKFGPIAVDKG   93 (344)
T ss_pred             HH---HHHHHHHHHhCC
Confidence            53   344444444444

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.31  E-value=2.2e-06  Score=55.48  Aligned_cols=72  Identities=19%  Similarity=0.233  Sum_probs=51.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|.+|++.+|++.+....   .... . .....+++.+.+.++|+||++.+..
T Consensus       149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~---~~~g-~-~~~~~~~l~~~l~~aDiVint~P~~  220 (287)
T TIGR02853       149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI---TEMG-L-IPFPLNKLEEKVAEIDIVINTIPAL  220 (287)
T ss_pred             CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HHCC-C-eeecHHHHHHHhccCCEEEECCChH
Confidence            45679999997 9999999999999999999999986433111   0000 0 1123455677788999999988654

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=98.30  E-value=3.7e-06  Score=54.33  Aligned_cols=35  Identities=31%  Similarity=0.516  Sum_probs=32.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      ++|..+| .|.+|..++.+|+++|+++++.+|++++
T Consensus         1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~k   35 (286)
T COG2084           1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEK   35 (286)
T ss_pred             CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhh
Confidence            3789999 5999999999999999999999999876

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=98.29  E-value=3.3e-06  Score=55.09  Aligned_cols=35  Identities=26%  Similarity=0.439  Sum_probs=31.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      .++|.|+|+ |.+|++++..|..+|++|.+++|+..
T Consensus         4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~   38 (308)
T PRK14619          4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG   38 (308)
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            468999996 99999999999999999999998764

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=98.28  E-value=2.1e-06  Score=55.80  Aligned_cols=70  Identities=16%  Similarity=0.172  Sum_probs=45.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |+|.++|. |.+|..++..|.++|++|.+.+|+++..+......    .....+.+++.+.+..+|+|+.+.+..
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g----~~~~~s~~~~~~~~~~~dvIi~~vp~~   70 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDR----TTGVANLRELSQRLSAPRVVWVMVPHG   70 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC----CcccCCHHHHHhhcCCCCEEEEEcCch
Confidence            37999996 99999999999999999999999875542211110    011223344444445566666666543

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=98.27  E-value=4.1e-06  Score=54.56  Aligned_cols=40  Identities=20%  Similarity=0.067  Sum_probs=33.4

Q ss_pred             CCCCCCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            1 MEGENTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      |...++.++++|||++  ..||+++++.|.++|.+|++.++.
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~   43 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV   43 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence            4455677899999994  799999999999999999886643

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=98.27  E-value=5.7e-06  Score=53.84  Aligned_cols=35  Identities=23%  Similarity=0.394  Sum_probs=31.6

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +|.++|. |.+|+.+++.|++.|++|.+++|+++..
T Consensus         2 ~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~~~~   36 (301)
T PRK09599          2 QLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNPEAV   36 (301)
T ss_pred             EEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            7999995 9999999999999999999999987544

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.27  E-value=4.7e-06  Score=56.10  Aligned_cols=74  Identities=19%  Similarity=0.304  Sum_probs=52.5

Q ss_pred             CCCCeEEEEcc----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHH-HH
Q 046878            5 NTKPKILIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKI-IS   67 (104)
Q Consensus         5 ~~~~~i~i~Ga----------------~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~-~~   67 (104)
                      ++.++++|+|+                +|.+|.++++.+..+|++|+++.++.... .+...    ...|+.+.+++ ..
T Consensus       183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-~~~~~----~~~~v~~~~~~~~~  257 (390)
T TIGR00521       183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-TPPGV----KSIKVSTAEEMLEA  257 (390)
T ss_pred             cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-CCCCc----EEEEeccHHHHHHH
Confidence            56689999998                36799999999999999999888765332 11111    12356666555 32


Q ss_pred             h----hccccEEEEcccCcC
Q 046878           68 I----LKEVGVVISTVAYPQ   83 (104)
Q Consensus        68 ~----~~~~d~vv~~a~~~~   83 (104)
                      .    +.+.|++|++||...
T Consensus       258 ~~~~~~~~~D~~i~~Aavsd  277 (390)
T TIGR00521       258 ALNELAKDFDIFISAAAVAD  277 (390)
T ss_pred             HHHhhcccCCEEEEcccccc
Confidence            3    346899999999875

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.25  E-value=1.2e-06  Score=56.20  Aligned_cols=97  Identities=20%  Similarity=0.415  Sum_probs=63.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCC--CCcccccccccccccc----cccChHHHHHhh--ccccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPV--TENSRTSKLEIHKEFQ----ELDEHEKIISIL--KEVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~--~~~~~~~~~~~~~~~~----d~~~~~~~~~~~--~~~d~vv~   77 (104)
                      ++++|+|+.||+|++.+..+...-  +..+.++.-.  ......+...+.+...    |+.+...+...+  ...|.|+|
T Consensus         7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih   86 (331)
T KOG0747|consen    7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH   86 (331)
T ss_pred             ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence            689999999999999999999864  3333333210  0011122222222211    666666665555  36899999


Q ss_pred             cccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|+...               +..+..|++++...+++++||
T Consensus        87 faa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fv  128 (331)
T KOG0747|consen   87 FAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFV  128 (331)
T ss_pred             hHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEE
Confidence            998754               456778999999887788875

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=98.24  E-value=5.9e-06  Score=57.92  Aligned_cols=74  Identities=15%  Similarity=0.146  Sum_probs=56.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      ..++|+|+ |.+|+.+++.|.++|+++++++.+++..+............|..+++.++++ ++++|.++.+.+..
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~  492 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNG  492 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCCh
Confidence            47899997 9999999999999999999999987665333222222223489999988876 68899888777654

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=98.23  E-value=5e-06  Score=55.06  Aligned_cols=82  Identities=15%  Similarity=0.195  Sum_probs=48.4

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeE---EEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNT---FVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v---~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      +|+|+||+|++|+.+++.|.++++++   ..+.+.....+..........+.|+.     ...+.++|+||.++|...  
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~~~~~~~~~~~-----~~~~~~~D~v~~a~g~~~--   73 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFKGKELEVNEAK-----IESFEGIDIALFSAGGSV--   73 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeCCeeEEEEeCC-----hHHhcCCCEEEECCCHHH--
Confidence            58999999999999999999887763   34444433221111111001111332     223578999999998653  


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                       ...++..+.+.+
T Consensus        74 -s~~~a~~~~~~G   85 (339)
T TIGR01296        74 -SKEFAPKAAKCG   85 (339)
T ss_pred             -HHHHHHHHHHCC
Confidence             344555454454

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK04148 hypothetical protein; Provisional

Probab=98.23  E-value=8.2e-06  Score=47.16  Aligned_cols=86  Identities=20%  Similarity=0.169  Sum_probs=59.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChhh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLD   86 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~   86 (104)
                      +++++.+|. | .|.+++..|.+.|++|++++.++...+............|+.+++  -+.-+++|.|+.+=++..  -
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~--~~~y~~a~liysirpp~e--l   90 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPN--LEIYKNAKLIYSIRPPRD--L   90 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCC--HHHHhcCCEEEEeCCCHH--H
Confidence            468999996 8 999999999999999999999986542221111111123666654  344568999998888764  4


Q ss_pred             HHHHHHHHHHhC
Q 046878           87 QLKIVDAIKVAG   98 (104)
Q Consensus        87 ~~~l~~~~~~~~   98 (104)
                      +..+++.+.+.+
T Consensus        91 ~~~~~~la~~~~  102 (134)
T PRK04148         91 QPFILELAKKIN  102 (134)
T ss_pred             HHHHHHHHHHcC
Confidence            567777776654

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.23  E-value=2.9e-06  Score=57.78  Aligned_cols=74  Identities=14%  Similarity=0.205  Sum_probs=55.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      |+++|+|+ |.+|+++++.|.+.|+++++++++++..+.... ........|..+.+.+.++ +.++|.|+.+.+..
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~~~   76 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLDVRTVVGNGSSPDVLREAGAEDADLLIAVTDSD   76 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcCEEEEEeCCCCHHHHHHcCCCcCCEEEEecCCh
Confidence            47999997 999999999999999999999998765422111 1111112377788888888 88999999988754

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=98.22  E-value=1.4e-05  Score=54.35  Aligned_cols=39  Identities=18%  Similarity=0.109  Sum_probs=34.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |++++|.|+|. |++|..++..|.+.|++|+++++++.+.
T Consensus         1 m~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v   39 (415)
T PRK11064          1 MSFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAV   39 (415)
T ss_pred             CCccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            34578999995 9999999999999999999999987665

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.22  E-value=4.8e-06  Score=54.16  Aligned_cols=72  Identities=15%  Similarity=0.189  Sum_probs=51.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.++..|...|.+|++++|++........   ..  ......+++.+.++++|+||++++..
T Consensus       150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~---~G--~~~~~~~~l~~~l~~aDiVI~t~p~~  221 (296)
T PRK08306        150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE---MG--LSPFHLSELAEEVGKIDIIFNTIPAL  221 (296)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---cC--CeeecHHHHHHHhCCCCEEEECCChh
Confidence            34679999996 999999999999999999999998654311111   11  01223356677788999999998653

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.21  E-value=8.2e-06  Score=51.18  Aligned_cols=82  Identities=24%  Similarity=0.379  Sum_probs=54.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~   83 (104)
                      ++|+|+|++|.+|+++.+.+.+.+.  +-+++..+. .             .|+++......+|.  ..-.|||+|+.-.
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk-d-------------~DLt~~a~t~~lF~~ekPthVIhlAAmVG   67 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK-D-------------ADLTNLADTRALFESEKPTHVIHLAAMVG   67 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc-c-------------ccccchHHHHHHHhccCCceeeehHhhhc
Confidence            6899999999999999999998875  211111111 1             25666666666664  3567888876421


Q ss_pred             ----------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ----------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ----------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                      +.-+.+++..|-+.+ +++++
T Consensus        68 Glf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~v  103 (315)
T KOG1431|consen   68 GLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVV  103 (315)
T ss_pred             chhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhh
Confidence                            223457888888887 77653

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=98.21  E-value=2e-06  Score=53.56  Aligned_cols=75  Identities=23%  Similarity=0.298  Sum_probs=47.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--ccccc--ccc-cccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIHK--EFQ-ELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~~--~~~-d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |+|.|+|++|.+|..++..|.+.|++|.+++|++++......  .....  .+. ... ..+..+.+.++|+||.+.+..
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~-~~~~~ea~~~aDvVilavp~~   79 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVT-GADNAEAAKRADVVILAVPWD   79 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEE-EeChHHHHhcCCEEEEECCHH
Confidence            479999877999999999999999999999888654421100  00000  000 000 011244566788888887765


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        80 ~   80 (219)
T TIGR01915        80 H   80 (219)
T ss_pred             H
Confidence            4

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=98.21  E-value=9.6e-06  Score=52.77  Aligned_cols=76  Identities=16%  Similarity=0.212  Sum_probs=54.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---ccc---cc-ccccChHHHHHhhc-------cc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHK---EF-QELDEHEKIISILK-------EV   72 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~---~~-~d~~~~~~~~~~~~-------~~   72 (104)
                      .+++|+|++..+|.+++..+...|.+|+++.|+..+.... ...+   ...   .. .|+.|.+++...+.       ..
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            4799999999999999999999999999999997665221 0111   111   11 26666666655543       57


Q ss_pred             cEEEEcccCcC
Q 046878           73 GVVISTVAYPQ   83 (104)
Q Consensus        73 d~vv~~a~~~~   83 (104)
                      |.+|+|||...
T Consensus       114 d~l~~cAG~~v  124 (331)
T KOG1210|consen  114 DNLFCCAGVAV  124 (331)
T ss_pred             ceEEEecCccc
Confidence            99999999754

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.20  E-value=4.9e-06  Score=56.72  Aligned_cols=85  Identities=19%  Similarity=0.209  Sum_probs=53.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccccc--cccc-ccccChHHHHHhhccccEEEEcc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKLEI--HKEF-QELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~~~--~~~~-~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      ++.++++|+|+ |.+|.++++.|++.|++|++.+++.... +. ......  ...+ .+..+     +...++|+||+++
T Consensus         3 ~~~k~v~iiG~-g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~~~~~d~vv~~~   76 (450)
T PRK14106          3 LKGKKVLVVGA-GVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPE-----EFLEGVDLVVVSP   76 (450)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcch-----hHhhcCCEEEECC
Confidence            55679999998 6699999999999999999998875221 00 000000  0000 12221     3356799999999


Q ss_pred             cCcChhhHHHHHHHHHHhC
Q 046878           80 AYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        80 ~~~~~~~~~~l~~~~~~~~   98 (104)
                      |...   ....+..+++.+
T Consensus        77 g~~~---~~~~~~~a~~~~   92 (450)
T PRK14106         77 GVPL---DSPPVVQAHKKG   92 (450)
T ss_pred             CCCC---CCHHHHHHHHCC
Confidence            8753   234555555544

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=98.19  E-value=1.5e-05  Score=52.33  Aligned_cols=69  Identities=19%  Similarity=0.274  Sum_probs=50.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+|- |.||+.+++.|...|.+|.+++++.+...   ..      ......+++.++++++|+|+.+.+...
T Consensus       134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~---~~------~~~~~~~~l~e~l~~aDvvv~~lPlt~  202 (312)
T PRK15469        134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP---GV------QSFAGREELSAFLSQTRVLINLLPNTP  202 (312)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC---Cc------eeecccccHHHHHhcCCEEEECCCCCH
Confidence            45579999995 99999999999999999999887653321   10      111234467777888888888877643

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=98.19  E-value=4.7e-06  Score=56.49  Aligned_cols=75  Identities=12%  Similarity=0.304  Sum_probs=53.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      .+.++++|+|+ |.+|+.+++.|...|. +++++.|+..+.....  ..... ......+++.+.+.++|+||++.+.+.
T Consensus       179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La--~~~~~-~~~~~~~~l~~~l~~aDiVI~aT~a~~  254 (414)
T PRK13940        179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKIT--SAFRN-ASAHYLSELPQLIKKADIIIAAVNVLE  254 (414)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH--HHhcC-CeEecHHHHHHHhccCCEEEECcCCCC
Confidence            45679999996 9999999999999985 7999999865431111  11110 122334666788899999999999876

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=98.18  E-value=3.3e-06  Score=55.52  Aligned_cols=75  Identities=16%  Similarity=0.165  Sum_probs=48.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc--cc-cccChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE--FQ-ELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~--~~-d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      ++|.|+|+ |.+|..++..|..+|++|.+++|+++..+.....    .....  .. .+...+++.++++++|+|+.+.+
T Consensus         5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v~   83 (328)
T PRK14618          5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAVP   83 (328)
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEECc
Confidence            48999996 9999999999999999999999976543211110    00000  00 01112234455678898888887


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      ...
T Consensus        84 ~~~   86 (328)
T PRK14618         84 SKA   86 (328)
T ss_pred             hHH
Confidence            653

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.18  E-value=7.8e-06  Score=54.74  Aligned_cols=75  Identities=15%  Similarity=0.169  Sum_probs=53.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ...+++|+|+ |.+|...++.+...|.+|.+++|++...+.....-......+..+++.+.+.++++|+||++++.
T Consensus       166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~  240 (370)
T TIGR00518       166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLI  240 (370)
T ss_pred             CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence            3467999997 99999999999999999999998865431111000000011345667788889999999999854

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=98.18  E-value=7.4e-06  Score=55.31  Aligned_cols=84  Identities=21%  Similarity=0.329  Sum_probs=61.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++.++++++|+ |-+|.-++++|.+.| ..++++.|+.++....  .....  ..+...+++...+.++|+||.+.+.+.
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~L--a~~~~--~~~~~l~el~~~l~~~DvVissTsa~~  250 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEEL--AKKLG--AEAVALEELLEALAEADVVISSTSAPH  250 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH--HHHhC--CeeecHHHHHHhhhhCCEEEEecCCCc
Confidence            46679999997 999999999999999 5799999987654211  11111  245567788888999999999998876


Q ss_pred             hhhHHHHHHH
Q 046878           84 LLDQLKIVDA   93 (104)
Q Consensus        84 ~~~~~~l~~~   93 (104)
                      ..-....++.
T Consensus       251 ~ii~~~~ve~  260 (414)
T COG0373         251 PIITREMVER  260 (414)
T ss_pred             cccCHHHHHH
Confidence            4333333333

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.17  E-value=8.5e-06  Score=53.65  Aligned_cols=75  Identities=13%  Similarity=0.204  Sum_probs=46.5

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCcc-ccccccccccc----ccccChHHHHHhhccccEEE
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTENS-RTSKLEIHKEF----QELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~~-~~~~~~~~~~~----~d~~~~~~~~~~~~~~d~vv   76 (104)
                      +|.|+|++|.+|+.++..|...+.       ++.++++.+.... .....+.....    ....-.....+.++++|+||
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~g~~~Dl~d~~~~~~~~~~~~~~~~~~~~~aDiVV   80 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLEGVVMELMDCAFPLLDGVVPTHDPAVAFTDVDVAI   80 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccceeEeehhcccchhcCceeccCChHHHhCCCCEEE
Confidence            589999999999999999987542       5888888654310 00000100000    00000113357789999999


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      +++|.+.
T Consensus        81 itAG~~~   87 (324)
T TIGR01758        81 LVGAFPR   87 (324)
T ss_pred             EcCCCCC
Confidence            9999865

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=98.17  E-value=5.6e-05  Score=43.66  Aligned_cols=89  Identities=24%  Similarity=0.346  Sum_probs=56.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc-----c-c---------------cccc-----cccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK-----L-E---------------IHKE-----FQEL   59 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~-----~-~---------------~~~~-----~~d~   59 (104)
                      ..+++|+|+ |.+|..+++.|...|. ++.+++.+.-.......     . +               ..+.     +...
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            368999997 9999999999999996 78888875322210000     0 0               0000     0012


Q ss_pred             cChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           60 DEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        60 ~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      .+.+...+.++++|+||.+....  .....+.+.|.+.+
T Consensus        81 ~~~~~~~~~~~~~d~vi~~~d~~--~~~~~l~~~~~~~~  117 (135)
T PF00899_consen   81 IDEENIEELLKDYDIVIDCVDSL--AARLLLNEICREYG  117 (135)
T ss_dssp             CSHHHHHHHHHTSSEEEEESSSH--HHHHHHHHHHHHTT
T ss_pred             cccccccccccCCCEEEEecCCH--HHHHHHHHHHHHcC
Confidence            23566777788999999988763  34456666777665

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.16  E-value=1.2e-05  Score=53.43  Aligned_cols=36  Identities=25%  Similarity=0.307  Sum_probs=29.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~   41 (104)
                      ++.+|+|+||+|++|+.+++.|..... ++..+.++.
T Consensus         2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            457999999999999999999998654 777774443

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=98.16  E-value=8e-06  Score=50.96  Aligned_cols=77  Identities=14%  Similarity=0.239  Sum_probs=51.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcC-CCCccccccccc-------ccccc-cccChHHHHHhh-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARP-VTENSRTSKLEI-------HKEFQ-ELDEHEKIISIL-----   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~-~~~~~~~~~~~~-------~~~~~-d~~~~~~~~~~~-----   69 (104)
                      |.++.++|+||+..||..|+++|+.. +.++.+.+++ +++.  ....+.       ...+. |+++.+++.+..     
T Consensus         1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a--~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~   78 (249)
T KOG1611|consen    1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA--ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEK   78 (249)
T ss_pred             CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh--hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHh
Confidence            45567999999999999999999964 5666666555 5442  111111       11112 777777766654     


Q ss_pred             ----ccccEEEEcccCcC
Q 046878           70 ----KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ----~~~d~vv~~a~~~~   83 (104)
                          .+.+++++++|...
T Consensus        79 iVg~~GlnlLinNaGi~~   96 (249)
T KOG1611|consen   79 IVGSDGLNLLINNAGIAL   96 (249)
T ss_pred             hcccCCceEEEeccceee
Confidence                35799999999743

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=98.16  E-value=9.8e-06  Score=54.34  Aligned_cols=56  Identities=27%  Similarity=0.414  Sum_probs=42.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++|+|+|+.|.+|..++..|...|++|+++++++.                    ++..+.+.++|+||.|++..
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~--------------------~~~~~~~~~aDlVilavP~~  153 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW--------------------DRAEDILADAGMVIVSVPIH  153 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc--------------------hhHHHHHhcCCEEEEeCcHH
Confidence            368999998899999999999999999999998531                    11233455677777776654

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=98.16  E-value=4.8e-06  Score=54.36  Aligned_cols=74  Identities=9%  Similarity=0.240  Sum_probs=49.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-----------cccccc------ccccccChHHHHHhhc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-----------KLEIHK------EFQELDEHEKIISILK   70 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-----------~~~~~~------~~~d~~~~~~~~~~~~   70 (104)
                      ++|.|+|+ |.+|..++..|..+|++|+++++++...+...           ......      ....+.-..++.++++
T Consensus         3 ~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~~~~~~~a~~   81 (308)
T PRK06129          3 GSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRVTDSLADAVA   81 (308)
T ss_pred             cEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEEECcHHHhhC
Confidence            57999995 99999999999999999999999875432100           000000      0001111234556678


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+|+.+.+..
T Consensus        82 ~ad~Vi~avpe~   93 (308)
T PRK06129         82 DADYVQESAPEN   93 (308)
T ss_pred             CCCEEEECCcCC
Confidence            899999988754

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.15  E-value=4.8e-06  Score=54.72  Aligned_cols=81  Identities=10%  Similarity=0.102  Sum_probs=53.5

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-----------cccccc--cccccChHHHHH
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-----------LEIHKE--FQELDEHEKIIS   67 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-----------~~~~~~--~~d~~~~~~~~~   67 (104)
                      |...+..++|.|+|+ |.+|..++..++..|++|++.+++++..+....           ......  ...+.-..++++
T Consensus         1 ~~~~~~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~   79 (321)
T PRK07066          1 MAVITDIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEA   79 (321)
T ss_pred             CCCCCCCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHH
Confidence            445555578999997 999999999999999999999998754321000           000000  001111234667


Q ss_pred             hhccccEEEEcccCc
Q 046878           68 ILKEVGVVISTVAYP   82 (104)
Q Consensus        68 ~~~~~d~vv~~a~~~   82 (104)
                      +++++|+|+-+++..
T Consensus        80 av~~aDlViEavpE~   94 (321)
T PRK07066         80 CVADADFIQESAPER   94 (321)
T ss_pred             HhcCCCEEEECCcCC
Confidence            788999999887754

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=98.14  E-value=5.3e-06  Score=48.72  Aligned_cols=75  Identities=16%  Similarity=0.190  Sum_probs=48.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+.++++|+|+ |.+|..+++.|...| ..+.+++|++...+.. ..........+..+   ..+.+.++|+|+++++..
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~Dvvi~~~~~~   92 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLD---LEELLAEADLIINTTPVG   92 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecc---hhhccccCCEEEeCcCCC
Confidence            34578999997 999999999999886 7899998876543111 11010000012222   334478899999998875


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        93 ~   93 (155)
T cd01065          93 M   93 (155)
T ss_pred             C
Confidence            4

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.14  E-value=2.9e-05  Score=50.86  Aligned_cols=75  Identities=17%  Similarity=0.207  Sum_probs=48.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccccccccccccccc---ChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLEIHKEFQELD---EHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~---~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +||.|+|++|.+|++++..|...+  .++.+++.+.......+ ..+......+.   ..+++.+.++++|+||.++|.+
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~alD-L~~~~~~~~i~~~~~~~~~y~~~~daDivvitaG~~   79 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVAAD-LSHINTPAKVTGYLGPEELKKALKGADVVVIPAGVP   79 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceeehH-hHhCCCcceEEEecCCCchHHhcCCCCEEEEeCCCC
Confidence            489999988999999999998777  36888887611110111 11110001121   2234677899999999999986


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        80 ~   80 (310)
T cd01337          80 R   80 (310)
T ss_pred             C
Confidence            4

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.13  E-value=4e-06  Score=54.18  Aligned_cols=75  Identities=15%  Similarity=0.257  Sum_probs=49.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----c------ccc-c------cccccChHHHHHh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----E------IHK-E------FQELDEHEKIISI   68 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~------~~~-~------~~d~~~~~~~~~~   68 (104)
                      .++|.|+|+ |.+|..++..|..+|++|++++++++..+.....     .      ... .      ...+.-..++.++
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a   81 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA   81 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence            468999996 9999999999999999999999987543211100     0      000 0      0011112345667


Q ss_pred             hccccEEEEcccCc
Q 046878           69 LKEVGVVISTVAYP   82 (104)
Q Consensus        69 ~~~~d~vv~~a~~~   82 (104)
                      ++++|+||-+.+..
T Consensus        82 ~~~aDlVieavpe~   95 (287)
T PRK08293         82 VKDADLVIEAVPED   95 (287)
T ss_pred             hcCCCEEEEeccCC
Confidence            78999999998854

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=98.12  E-value=1.2e-05  Score=56.91  Aligned_cols=87  Identities=17%  Similarity=0.277  Sum_probs=64.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChhh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLLD   86 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~~   86 (104)
                      ..++|+|. |.+|+.+++.|.++|+++++++.+++..+............|.++++.++++ +.++|.++.+.+..  +.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~--~~  477 (601)
T PRK03659        401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEP--ED  477 (601)
T ss_pred             CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCH--HH
Confidence            57999996 9999999999999999999999998765333222222223489999999887 78999999888764  33


Q ss_pred             HHHHHHHHHHh
Q 046878           87 QLKIVDAIKVA   97 (104)
Q Consensus        87 ~~~l~~~~~~~   97 (104)
                      ...++..+++.
T Consensus       478 n~~i~~~~r~~  488 (601)
T PRK03659        478 TMKIVELCQQH  488 (601)
T ss_pred             HHHHHHHHHHH
Confidence            34555555554

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=98.12  E-value=5.6e-06  Score=53.81  Aligned_cols=36  Identities=22%  Similarity=0.308  Sum_probs=32.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ++|.++|. |.+|..++..|.+.|++|.+++|++++.
T Consensus         2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~~~~   37 (296)
T PRK15461          2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNPQAV   37 (296)
T ss_pred             CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            47999996 9999999999999999999999987654

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=98.12  E-value=2.9e-05  Score=51.21  Aligned_cols=36  Identities=19%  Similarity=0.203  Sum_probs=32.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +..+++.|+|. |.||+.+++.|..-|.+|.++++..
T Consensus       140 l~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~  175 (324)
T COG0111         140 LAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYS  175 (324)
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCC
Confidence            34689999996 9999999999999999999999843

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=98.11  E-value=5.1e-06  Score=54.30  Aligned_cols=74  Identities=16%  Similarity=0.292  Sum_probs=48.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc----ccccc--c-cccChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE----IHKEF--Q-ELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~----~~~~~--~-d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      ++|.|+|+ |.+|..++..|...|++|.+++|++...+......    .....  . .....++..+.+.++|+||.+.+
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v~   80 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAVP   80 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeCC
Confidence            58999996 99999999999999999999999764432111100    00000  0 11112234455678899999988


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        81 ~~   82 (325)
T PRK00094         81 SQ   82 (325)
T ss_pred             HH
Confidence            64

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=98.11  E-value=1.4e-05  Score=53.65  Aligned_cols=76  Identities=16%  Similarity=0.164  Sum_probs=51.0

Q ss_pred             CCeEEEEccCChhhHH--HHHHHHhCCCeEEEEEcCCCCcc-------------c---ccccc--cccccccccChHHHH
Q 046878            7 KPKILIFGGTGYLGKY--MVKASVSSGHNTFVYARPVTENS-------------R---TSKLE--IHKEFQELDEHEKII   66 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~--l~~~l~~~~~~v~~~~r~~~~~~-------------~---~~~~~--~~~~~~d~~~~~~~~   66 (104)
                      +++++|+|+++.+|.+  +++.| ..|..+.++++..+...             .   .....  ......|+.+++++.
T Consensus        41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~  119 (398)
T PRK13656         41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ  119 (398)
T ss_pred             CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence            4789999999999999  89999 88998888875321110             0   00000  001112888877666


Q ss_pred             Hhh-------ccccEEEEcccCcC
Q 046878           67 SIL-------KEVGVVISTVAYPQ   83 (104)
Q Consensus        67 ~~~-------~~~d~vv~~a~~~~   83 (104)
                      +++       ..+|++||++|.+.
T Consensus       120 ~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656        120 KVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HHHHHHHHhcCCCCEEEECCccCC
Confidence            554       36899999999873

>PRK07574 formate dehydrogenase; Provisional

Probab=98.11  E-value=2.9e-05  Score=52.25  Aligned_cols=70  Identities=16%  Similarity=0.104  Sum_probs=47.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.||+.+++.|...|.+|.+.+|+....+.....       +..-..++.++++++|+|+.+.+..
T Consensus       190 L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~-------g~~~~~~l~ell~~aDvV~l~lPlt  259 (385)
T PRK07574        190 LEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQEL-------GLTYHVSFDSLVSVCDVVTIHCPLH  259 (385)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhc-------CceecCCHHHHhhcCCEEEEcCCCC
Confidence            45679999996 9999999999999999999998875322111000       1111224566677788777777654

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.11  E-value=5.7e-06  Score=53.55  Aligned_cols=36  Identities=14%  Similarity=0.358  Sum_probs=33.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+|.|+|+ |.+|..++..++.+|++|++++++++..
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~   41 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELA   41 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            48999997 9999999999999999999999998665

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.11  E-value=1.7e-05  Score=50.51  Aligned_cols=89  Identities=20%  Similarity=0.316  Sum_probs=63.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccc---------cc----cccccChHHHHHhhc--ccc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIH---------KE----FQELDEHEKIISILK--EVG   73 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~---------~~----~~d~~~~~~~~~~~~--~~d   73 (104)
                      ..+|+|-+|.=|+.|++.|+..|++|.++.|+.+.... ...+++         ..    ..|.+|...+.+.+.  ..+
T Consensus        30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT-~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt  108 (376)
T KOG1372|consen   30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNT-ARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT  108 (376)
T ss_pred             EEEEecccCCCchHHHHHHHhCCceeeEEEeeccccch-hhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence            46999999999999999999999999999887655411 111111         00    128888888888875  457


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      -|+|+++.++               ..++.+++++....+
T Consensus       109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~  148 (376)
T KOG1372|consen  109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR  148 (376)
T ss_pred             hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC
Confidence            7888888765               235678888877543

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=98.10  E-value=2.7e-05  Score=51.52  Aligned_cols=85  Identities=9%  Similarity=0.128  Sum_probs=48.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+.++.|+||||++|+.+++.|.++.+   ++..+.......+... .... .. .+.+.+.  ..+.++|++|.+++..
T Consensus         3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-~~~~-~~-~v~~~~~--~~~~~~Dvvf~a~p~~   77 (336)
T PRK08040          3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-FGGK-SV-TVQDAAE--FDWSQAQLAFFVAGRE   77 (336)
T ss_pred             CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-ECCc-ce-EEEeCch--hhccCCCEEEECCCHH
Confidence            446899999999999999999998544   4555544332221111 1100 00 1112221  2246799999999765


Q ss_pred             ChhhHHHHHHHHHHhC
Q 046878           83 QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~   98 (104)
                      .   ...++..+.+.+
T Consensus        78 ~---s~~~~~~~~~~g   90 (336)
T PRK08040         78 A---SAAYAEEATNAG   90 (336)
T ss_pred             H---HHHHHHHHHHCC
Confidence            3   345555554444

>PRK08655 prephenate dehydrogenase; Provisional

Probab=98.10  E-value=6e-06  Score=56.39  Aligned_cols=70  Identities=26%  Similarity=0.349  Sum_probs=47.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      |+|+|+||+|.+|..++..|...|++|.+++|+++......  ....    ..-..+..+.+.++|+||.+.+...
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a--~~~g----v~~~~~~~e~~~~aDvVIlavp~~~   70 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVA--KELG----VEYANDNIDAAKDADIVIISVPINV   70 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHH--HHcC----CeeccCHHHHhccCCEEEEecCHHH
Confidence            47999998899999999999999999999998865421110  0000    1011123445677888888887643

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=98.10  E-value=2e-05  Score=51.35  Aligned_cols=38  Identities=18%  Similarity=0.182  Sum_probs=33.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ...+++.++|.+|.+|+.++..|+++|+.|+++.++..
T Consensus       157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            45689999999889999999999999999999876653

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=98.10  E-value=1.3e-05  Score=55.20  Aligned_cols=36  Identities=22%  Similarity=0.337  Sum_probs=32.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+|.++|. |.+|.+++..|.++|++|.+.+|++++.
T Consensus         2 ~~IgvIGL-G~MG~~lA~nL~~~G~~V~v~dr~~~~~   37 (470)
T PTZ00142          2 SDIGLIGL-AVMGQNLALNIASRGFKISVYNRTYEKT   37 (470)
T ss_pred             CEEEEEeE-hHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            47999996 9999999999999999999999987664

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=98.10  E-value=2.4e-05  Score=52.27  Aligned_cols=84  Identities=14%  Similarity=0.224  Sum_probs=47.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      .++.|+||||++|+.+.+.|+++ ..+   +..++.+......+.-........+..+++    .+.++|++|.++|.. 
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~~~~f~g~~~~v~~~~~~~----~~~~~Divf~a~~~~-   76 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGAAPSFGGKEGTLQDAFDID----ALKKLDIIITCQGGD-   76 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCcccccCCCcceEEecCChh----HhcCCCEEEECCCHH-
Confidence            58999999999999999966655 444   555444322221111001001111333332    246899999999864 


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                        ....+...+.++|
T Consensus        77 --~s~~~~~~~~~aG   89 (369)
T PRK06598         77 --YTNEVYPKLRAAG   89 (369)
T ss_pred             --HHHHHHHHHHhCC
Confidence              3455555555554

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=98.10  E-value=2.4e-05  Score=53.38  Aligned_cols=75  Identities=16%  Similarity=0.216  Sum_probs=54.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-cccc-ccccccChHHHHHh-hccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EIHK-EFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~~~-~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      +++++|+|+ |.+|+.+++.|.+.|+++++++++++..+..... .... ...|..+++.+.++ +.++|.|+.+.+..
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~~~  308 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTNDD  308 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCCCc
Confidence            468999997 9999999999999999999999887654221111 1111 12378888888665 67899998777643

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=98.10  E-value=1.7e-05  Score=63.47  Aligned_cols=34  Identities=12%  Similarity=0.063  Sum_probs=30.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARP   40 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~   40 (104)
                      .++++||||++.||.++++.|.++ |.++.+++|+
T Consensus      1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813      1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence            468999999999999999999987 5899999998

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=98.10  E-value=2.8e-06  Score=51.74  Aligned_cols=75  Identities=23%  Similarity=0.247  Sum_probs=41.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccc--c----------ccccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKE--F----------QELDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~--~----------~d~~~~~~~~~~~~~~d~   74 (104)
                      |+|.|+|. |++|..++..|.+.|++|++++.++........ .....+  .          ..+.-..+..+++.++|+
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv   79 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV   79 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence            58999995 999999999999999999999998754421110 000000  0          011222334555678999


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +|.|.+.+.
T Consensus        80 ~~I~VpTP~   88 (185)
T PF03721_consen   80 VFICVPTPS   88 (185)
T ss_dssp             EEE----EB
T ss_pred             EEEecCCCc
Confidence            999998764

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=98.09  E-value=1.9e-05  Score=51.74  Aligned_cols=72  Identities=17%  Similarity=0.195  Sum_probs=45.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      +.+|.|+||+|++|..+++.|.++.+ ++..+..+....              ..+   ....+.++|+||.+++...  
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~~--------------~~~---~~~~~~~~DvvFlalp~~~--   62 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRKD--------------AAA---RRELLNAADVAILCLPDDA--   62 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCCc--------------ccC---chhhhcCCCEEEECCCHHH--
Confidence            35899999999999999999988763 455444443221              111   1233467899998886542  


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                       ...++..+.+.+
T Consensus        63 -s~~~~~~~~~~g   74 (313)
T PRK11863         63 -AREAVALIDNPA   74 (313)
T ss_pred             -HHHHHHHHHhCC
Confidence             344444444444

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.09  E-value=4.7e-05  Score=50.18  Aligned_cols=77  Identities=13%  Similarity=0.164  Sum_probs=48.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCcc-ccccccccc---cc-ccccChHHHHHhhccccE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTENS-RTSKLEIHK---EF-QELDEHEKIISILKEVGV   74 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~~-~~~~~~~~~---~~-~d~~~~~~~~~~~~~~d~   74 (104)
                      +.||.|+|++|.+|+.++..|+..+.       ++.+++....... .....+...   .. .+..-.....+.++++|+
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daDi   81 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVAFKDADW   81 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHHhCCCCE
Confidence            46899999989999999999987763       6888887543210 111111110   00 000001123567899999


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      ||.++|.+.
T Consensus        82 vvitaG~~~   90 (322)
T cd01338          82 ALLVGAKPR   90 (322)
T ss_pred             EEEeCCCCC
Confidence            999999865

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=98.08  E-value=6.8e-06  Score=52.94  Aligned_cols=36  Identities=14%  Similarity=0.254  Sum_probs=30.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVT   42 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~   42 (104)
                      +.++|.++|+ |.+|.++++.|+++|    +++++++|+++
T Consensus         2 ~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~   41 (279)
T PRK07679          2 SIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNE   41 (279)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCH
Confidence            4468999996 999999999999887    67888887653

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=98.08  E-value=1e-05  Score=52.63  Aligned_cols=35  Identities=23%  Similarity=0.303  Sum_probs=31.1

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +|.++|. |.+|.++++.|.+.|++|.+++|+++..
T Consensus         2 ~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~~~~   36 (299)
T PRK12490          2 KLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQEAV   36 (299)
T ss_pred             EEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            7999996 9999999999999999999999886543

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.08  E-value=1.6e-05  Score=52.06  Aligned_cols=74  Identities=20%  Similarity=0.256  Sum_probs=47.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCC--CCcccccccccccc------cccccChHHHHHhhccccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPV--TENSRTSKLEIHKE------FQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~--~~~~~~~~~~~~~~------~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +||.|+|++|++|..++..|+..|+  ++.++++..  +... ....+....      ...+.-..+ .+.+.++|+||.
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~-~~~~dl~d~~~~~~~~~~i~~~~d-~~~l~~aDiVii   78 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLK-GLRLDIYDALAAAGIDAEIKISSD-LSDVAGSDIVII   78 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccc-cccchhhhchhccCCCcEEEECCC-HHHhCCCCEEEE
Confidence            4899999999999999999999885  488989854  2221 011110000      001211112 234899999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|.+.
T Consensus        79 tag~p~   84 (309)
T cd05294          79 TAGVPR   84 (309)
T ss_pred             ecCCCC
Confidence            999654

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=98.08  E-value=4.9e-06  Score=52.20  Aligned_cols=70  Identities=11%  Similarity=0.248  Sum_probs=48.5

Q ss_pred             ccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCcc----cc-cccccccccccccChHHHHHh-------h-ccccEEEEc
Q 046878           14 GGT--GYLGKYMVKASVSSGHNTFVYARPVTENS----RT-SKLEIHKEFQELDEHEKIISI-------L-KEVGVVIST   78 (104)
Q Consensus        14 Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~----~~-~~~~~~~~~~d~~~~~~~~~~-------~-~~~d~vv~~   78 (104)
                      |++  +.||.++++.|+++|++|++.+|+.++..    .. ..........|+.+++++..+       + ..+|++||+
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            555  89999999999999999999999987521    00 001100111278787766665       3 467999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      ++...
T Consensus        81 a~~~~   85 (241)
T PF13561_consen   81 AGISP   85 (241)
T ss_dssp             EESCT
T ss_pred             ccccc
Confidence            97654

...

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=98.07  E-value=5.2e-06  Score=53.72  Aligned_cols=35  Identities=20%  Similarity=0.156  Sum_probs=30.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +|.|+|. |.+|..++..|.+.|++|++++|+++..
T Consensus         1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~~~~   35 (291)
T TIGR01505         1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGPEVA   35 (291)
T ss_pred             CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            4889996 9999999999999999999999887543

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PLN02928 oxidoreductase family protein

Probab=98.07  E-value=4.3e-05  Score=50.81  Aligned_cols=77  Identities=18%  Similarity=0.221  Sum_probs=51.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc--cccccc-ccccChHHHHHhhccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL--EIHKEF-QELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~--~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      +..++++|+|. |.||+.+++.|...|.+|.+++|+........ ..  ...... ......+++.++++++|+|+.+.+
T Consensus       157 l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~lP  235 (347)
T PLN02928        157 LFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCCT  235 (347)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccccCcccCHHHHHhhCCEEEECCC
Confidence            45689999996 99999999999999999999888632210000 00  000000 011234567888889999988887


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus       236 lt  237 (347)
T PLN02928        236 LT  237 (347)
T ss_pred             CC
Confidence            54

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=98.07  E-value=6.3e-06  Score=53.13  Aligned_cols=74  Identities=16%  Similarity=0.242  Sum_probs=48.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+.++++|+|+ |.+|++++..|...| .+|++++|+.++.+.. ........ ..+ + ....+.+.++|+||++.+..
T Consensus       121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~-~~~-~-~~~~~~~~~~DivInaTp~g  196 (278)
T PRK00258        121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGK-AEL-D-LELQEELADFDLIINATSAG  196 (278)
T ss_pred             CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccc-eee-c-ccchhccccCCEEEECCcCC
Confidence            34578999997 999999999999999 6899999987543211 11110000 011 1 12235567899999998754

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=98.07  E-value=1.1e-05  Score=52.23  Aligned_cols=77  Identities=23%  Similarity=0.134  Sum_probs=50.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +.++++|+|+ |..|++++..|...|. +++++.|+.++.+... ..........+...+++...+.++|+|||+.+...
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g~  202 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPADV  202 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCCC
Confidence            4568999997 9999999999999985 7999999875542111 11000101112222344555678999999988654

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=98.06  E-value=3.5e-06  Score=48.38  Aligned_cols=32  Identities=28%  Similarity=0.419  Sum_probs=27.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      ..+|.|+|+ |.+|.+|++.|.+.|++|..+..
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~s   41 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYS   41 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESS
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEe
Confidence            468999997 99999999999999999887753

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.06  E-value=2.1e-05  Score=53.50  Aligned_cols=74  Identities=22%  Similarity=0.317  Sum_probs=52.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ...++++|+|+ |.+|..+++.|...| .+|++++|+..+.....  .....  ...+.+++.+.+.++|+||.+.+.+.
T Consensus       178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la--~~~g~--~~i~~~~l~~~l~~aDvVi~aT~s~~  252 (417)
T TIGR01035       178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLA--KELGG--EAVKFEDLEEYLAEADIVISSTGAPH  252 (417)
T ss_pred             ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--HHcCC--eEeeHHHHHHHHhhCCEEEECCCCCC
Confidence            34578999997 999999999999988 68999999875431111  11110  12233566777889999999998765

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>PLN03139 formate dehydrogenase; Provisional

Probab=98.06  E-value=3.8e-05  Score=51.73  Aligned_cols=70  Identities=13%  Similarity=0.134  Sum_probs=47.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.||+.+++.|...|.+|.+.+++....   +.....    ...-.+++.++++++|+|+.+.+..
T Consensus       197 L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~---~~~~~~----g~~~~~~l~ell~~sDvV~l~lPlt  266 (386)
T PLN03139        197 LEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDP---ELEKET----GAKFEEDLDAMLPKCDVVVINTPLT  266 (386)
T ss_pred             CCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcch---hhHhhc----CceecCCHHHHHhhCCEEEEeCCCC
Confidence            45689999996 9999999999999999998887764222   100000    0111224566677788887777643

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=98.06  E-value=7.6e-06  Score=53.01  Aligned_cols=36  Identities=31%  Similarity=0.380  Sum_probs=31.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ++|.|+|. |.+|..++..|...|++|.+++|+++..
T Consensus         3 ~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~   38 (296)
T PRK11559          3 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAV   38 (296)
T ss_pred             ceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            58999996 9999999999999999999998876543

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=98.05  E-value=3.2e-05  Score=51.02  Aligned_cols=75  Identities=17%  Similarity=0.181  Sum_probs=44.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCc-ccccccccccccc----cccChHHHHHhhccccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTEN-SRTSKLEIHKEFQ----ELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~-~~~~~~~~~~~~~----d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      |.|++|+|++|+.|.+|.+.|..+.. ++..++.+.... ...+.........    ...+++.+  ...++|+||-+.+
T Consensus         2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~l~g~~~l~~~~~~~~~~--~~~~~DvvFlalP   79 (349)
T COG0002           2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPNLRGLVDLPFQTIDPEKI--ELDECDVVFLALP   79 (349)
T ss_pred             CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcccccccccccccCChhhh--hcccCCEEEEecC
Confidence            46899999999999999999998763 555555443222 1111111111111    11122222  4567999999998


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      -..
T Consensus        80 hg~   82 (349)
T COG0002          80 HGV   82 (349)
T ss_pred             chh
Confidence            654

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=98.04  E-value=9.6e-06  Score=49.98  Aligned_cols=39  Identities=13%  Similarity=0.123  Sum_probs=33.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      .++.++++|+|. |.+|+.+++.|.+.|++|++.+++++.
T Consensus        25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~   63 (200)
T cd01075          25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEA   63 (200)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence            466789999997 999999999999999999988877543

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06487 glycerate dehydrogenase; Provisional

Probab=98.04  E-value=5.1e-05  Score=49.87  Aligned_cols=63  Identities=13%  Similarity=0.179  Sum_probs=44.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|- |.||+.+++.|..-|.+|.+.++.....    ..          +..++.++++.+|+|+.+.+.+
T Consensus       146 l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~~~~~----~~----------~~~~l~ell~~sDiv~l~lPlt  208 (317)
T PRK06487        146 LEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLPGRPA----RP----------DRLPLDELLPQVDALTLHCPLT  208 (317)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCCcc----cc----------cccCHHHHHHhCCEEEECCCCC
Confidence            45679999995 9999999999998899998887653211    00          1124566677777777666653

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=98.03  E-value=2.6e-05  Score=54.01  Aligned_cols=36  Identities=19%  Similarity=0.296  Sum_probs=32.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+|.++|- |.+|+.++..|+++|++|.+.+|++++.
T Consensus         7 ~~IG~IGL-G~MG~~mA~nL~~~G~~V~V~NRt~~k~   42 (493)
T PLN02350          7 SRIGLAGL-AVMGQNLALNIAEKGFPISVYNRTTSKV   42 (493)
T ss_pred             CCEEEEee-HHHHHHHHHHHHhCCCeEEEECCCHHHH
Confidence            47999994 9999999999999999999999987654

>PRK06436 glycerate dehydrogenase; Provisional

Probab=98.03  E-value=7.3e-05  Score=48.90  Aligned_cols=65  Identities=17%  Similarity=0.290  Sum_probs=44.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|- |.+|+++++.|...|.+|.+++|+....    ...      ..  ..++.++++++|+|+.+.+..
T Consensus       120 L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~~~~----~~~------~~--~~~l~ell~~aDiv~~~lp~t  184 (303)
T PRK06436        120 LYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSYVND----GIS------SI--YMEPEDIMKKSDFVLISLPLT  184 (303)
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCccc----Ccc------cc--cCCHHHHHhhCCEEEECCCCC
Confidence            45689999995 9999999998888899999998874321    000      00  123455666677776666643

>PRK13243 glyoxylate reductase; Reviewed

Probab=98.02  E-value=4.2e-05  Score=50.59  Aligned_cols=68  Identities=19%  Similarity=0.213  Sum_probs=47.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|.+|.+++|++... ..   ....    . ...++.++++++|+|+.+.+..
T Consensus       148 L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~---~~~~----~-~~~~l~ell~~aDiV~l~lP~t  215 (333)
T PRK13243        148 VYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AE---KELG----A-EYRPLEELLRESDFVSLHVPLT  215 (333)
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hH---HHcC----C-EecCHHHHHhhCCEEEEeCCCC
Confidence            45689999996 9999999999999999999888865322 00   0000    1 1124566677888888777654

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=98.02  E-value=6.5e-05  Score=49.27  Aligned_cols=65  Identities=22%  Similarity=0.268  Sum_probs=45.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|- |.||+.+++.+..-|.+|.+.+++....    . .      .+ ...++.++++.+|+|+.+.+.+
T Consensus       143 L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~~~~----~-~------~~-~~~~l~ell~~sDvv~lh~Plt  207 (311)
T PRK08410        143 IKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSGKNK----N-E------EY-ERVSLEELLKTSDIISIHAPLN  207 (311)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCcccc----c-c------Cc-eeecHHHHhhcCCEEEEeCCCC
Confidence            46689999995 9999999999998899998888753211    0 0      01 1224666677777776666643

>PLN00203 glutamyl-tRNA reductase

Probab=98.02  E-value=1.9e-05  Score=54.95  Aligned_cols=87  Identities=21%  Similarity=0.295  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|+ |.+|..+++.|...|. +|+++.|+.+...... ......  ..+...+++.+.+.++|+||.+.+..
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~--i~~~~~~dl~~al~~aDVVIsAT~s~  340 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE--IIYKPLDEMLACAAEADVVFTSTSSE  340 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc--eEeecHhhHHHHHhcCCEEEEccCCC
Confidence            45679999997 9999999999999986 6999999875542111 110000  01233455667788999999998776


Q ss_pred             ChhhHHHHHHHH
Q 046878           83 QLLDQLKIVDAI   94 (104)
Q Consensus        83 ~~~~~~~l~~~~   94 (104)
                      ...-....++.+
T Consensus       341 ~pvI~~e~l~~~  352 (519)
T PLN00203        341 TPLFLKEHVEAL  352 (519)
T ss_pred             CCeeCHHHHHHh
Confidence            543334444443

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.01  E-value=1.7e-05  Score=51.97  Aligned_cols=73  Identities=22%  Similarity=0.371  Sum_probs=52.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccc-ccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ..++++|+|+ |.+|..+++.|...| .+|++++|++++... ......     +..+.+++.+.+.++|+||.+.+.+.
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~-----~~~~~~~~~~~l~~aDvVi~at~~~~  250 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG-----NAVPLDELLELLNEADVVISATGAPH  250 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC-----eEEeHHHHHHHHhcCCEEEECCCCCc
Confidence            4679999997 999999999999866 678899988654311 111111     22334556777888999999999876


Q ss_pred             h
Q 046878           84 L   84 (104)
Q Consensus        84 ~   84 (104)
                      .
T Consensus       251 ~  251 (311)
T cd05213         251 Y  251 (311)
T ss_pred             h
Confidence            4

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=98.01  E-value=3.9e-05  Score=51.40  Aligned_cols=67  Identities=18%  Similarity=0.289  Sum_probs=49.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv   76 (104)
                      +++|+|+|+ |.+|+.++..+.+.|+++.+++.++...  ..+.-......++.|.+.+.++...+|+|.
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~p--a~~~ad~~~~~~~~D~~~l~~~a~~~dvit   68 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSP--AAQVADEVIVADYDDVAALRELAEQCDVIT   68 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCc--hhHhCceEEecCCCCHHHHHHHHhcCCEEE
Confidence            358999997 9999999999999999999998765433  111111111236888999998888999874

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=98.01  E-value=3.1e-05  Score=50.79  Aligned_cols=74  Identities=16%  Similarity=0.197  Sum_probs=48.5

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccc---cChHHHHHhhccccEEEEcccCcC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQEL---DEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~---~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ||.|+|++|.+|++++..|...+.  ++.++++++......+ ..+......+   .+.+++.+.++++|+||.++|.+.
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a~D-L~~~~~~~~i~~~~~~~~~~~~~~daDivvitaG~~~   79 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVAAD-LSHIPTAASVKGFSGEEGLENALKGADVVVIPAGVPR   79 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEEch-hhcCCcCceEEEecCCCchHHHcCCCCEEEEeCCCCC
Confidence            689999999999999999988774  6888888762211111 1111100011   112345678999999999999864

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=98.01  E-value=1.3e-05  Score=50.55  Aligned_cols=72  Identities=11%  Similarity=0.164  Sum_probs=43.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC---e-EEEEEcCC-CCcccccccccccccccccChHHHHHhhccccEEEEcc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH---N-TFVYARPV-TENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~-v~~~~r~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      |++++|.|+|+ |.+|.+++..|...+.   . +++..|+. +..+...  .... ..-..   ++.+.++++|+||.+.
T Consensus         2 m~~~kI~iIG~-G~mg~ala~~l~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~-~~~~~---~~~~~~~~~DiViiav   74 (245)
T PRK07634          2 LKKHRILFIGA-GRMAEAIFSGLLKTSKEYIEEIIVSNRSNVEKLDQLQ--ARYN-VSTTT---DWKQHVTSVDTIVLAM   74 (245)
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhCCCCCcCeEEEECCCCHHHHHHHH--HHcC-cEEeC---ChHHHHhcCCEEEEec
Confidence            45578999996 9999999999988763   2 55555543 2221110  0011 11112   2344567889999888


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      ++..
T Consensus        75 p~~~   78 (245)
T PRK07634         75 PPSA   78 (245)
T ss_pred             CHHH
Confidence            8754

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=98.01  E-value=6.4e-05  Score=49.85  Aligned_cols=90  Identities=26%  Similarity=0.276  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc---------------c-------cccc-ccc----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS---------------K-------LEIH-KEF----   56 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~---------------~-------~~~~-~~~----   56 (104)
                      ++..+|+|+|+ |.+|.++++.|...|. .+++++++.-......               +       .... +.+    
T Consensus        22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~  100 (338)
T PRK12475         22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP  100 (338)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence            44578999997 9999999999999996 7888888642110000               0       0000 100    


Q ss_pred             --ccccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           57 --QELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        57 --~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                        .++ +.+.+.+.++++|+||.+....  .....+-+.|.+.+
T Consensus       101 ~~~~~-~~~~~~~~~~~~DlVid~~D~~--~~r~~in~~~~~~~  141 (338)
T PRK12475        101 VVTDV-TVEELEELVKEVDLIIDATDNF--DTRLLINDLSQKYN  141 (338)
T ss_pred             EeccC-CHHHHHHHhcCCCEEEEcCCCH--HHHHHHHHHHHHcC
Confidence              022 3456778889999999998643  33334446666655

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.00  E-value=3.2e-05  Score=51.89  Aligned_cols=75  Identities=23%  Similarity=0.262  Sum_probs=52.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--cccc-cccc--------c--ccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIH-KEFQ--------E--LDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~-~~~~--------d--~~~~~~~~~~~~~~d~   74 (104)
                      |+|.|+| +||+|...+.-|.+.||+|++++.++.+.+...+  .... +.+.        +  +.-..+...++++.|+
T Consensus         1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv   79 (414)
T COG1004           1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV   79 (414)
T ss_pred             CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence            5899999 5999999999999999999999998766532110  0000 0000        1  2223355777889999


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +|.+.|.+.
T Consensus        80 ~fIavgTP~   88 (414)
T COG1004          80 VFIAVGTPP   88 (414)
T ss_pred             EEEEcCCCC
Confidence            999999875

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.00  E-value=7e-06  Score=53.07  Aligned_cols=74  Identities=16%  Similarity=0.222  Sum_probs=50.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-c----c------ccc------cccccChHHHHHhhc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-E----I------HKE------FQELDEHEKIISILK   70 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~----~------~~~------~~d~~~~~~~~~~~~   70 (104)
                      ++|.|+|+ |.+|..++..|..+|++|++++++++..+..... .    .      ...      ...+.-.+++.+.++
T Consensus         2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~   80 (288)
T PRK09260          2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA   80 (288)
T ss_pred             cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence            57999997 9999999999999999999999987655221100 0    0      000      001111234566788


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+||-|.+..
T Consensus        81 ~aD~Vi~avpe~   92 (288)
T PRK09260         81 DADLVIEAVPEK   92 (288)
T ss_pred             CCCEEEEeccCC
Confidence            999999998864

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.99  E-value=4.1e-05  Score=49.59  Aligned_cols=36  Identities=14%  Similarity=0.195  Sum_probs=31.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      .+.++++|+|++|.+|+.++..|...|..|+++.|+
T Consensus       157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            456899999997779999999999998888887763

>PRK08223 hypothetical protein; Validated

Probab=97.99  E-value=9.9e-05  Score=47.85  Aligned_cols=93  Identities=18%  Similarity=0.133  Sum_probs=58.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-------------c-------cccc-cc-----cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-------------K-------LEIH-KE-----FQ   57 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-------------~-------~~~~-~~-----~~   57 (104)
                      ++..+|+|+|+ |.+|..++..|...|. ++.+++.+.-......             +       ...+ +.     +.
T Consensus        25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~  103 (287)
T PRK08223         25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP  103 (287)
T ss_pred             HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence            34578999997 9999999999999995 7888877532211000             0       0000 00     00


Q ss_pred             cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      ...++++..+.++++|+|+.+.-.........+-++|.+.+
T Consensus       104 ~~l~~~n~~~ll~~~DlVvD~~D~~~~~~r~~ln~~c~~~~  144 (287)
T PRK08223        104 EGIGKENADAFLDGVDVYVDGLDFFEFDARRLVFAACQQRG  144 (287)
T ss_pred             cccCccCHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHcC
Confidence            12234566777889999997776543344455667777765

>PTZ00345 glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.99  E-value=4.5e-05  Score=51.06  Aligned_cols=77  Identities=9%  Similarity=0.147  Sum_probs=51.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-------CeEEEEEcCCCC-----ccc----ccccccccccc---cccChHHHHH
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-------HNTFVYARPVTE-----NSR----TSKLEIHKEFQ---ELDEHEKIIS   67 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-------~~v~~~~r~~~~-----~~~----~~~~~~~~~~~---d~~~~~~~~~   67 (104)
                      +++|.|+|+ |.+|++++..|..++       ++|.++.|++..     .+.    ..+....+.+.   ++.-..++.+
T Consensus        11 ~~ki~ViGa-G~wGtAlA~~l~~n~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~N~~ylp~~~Lp~ni~~tsdl~e   89 (365)
T PTZ00345         11 PLKVSVIGS-GNWGSAISKVVGENTQRNYIFHNEVRMWVLEEIVEGEKLSDIINTKHENVKYLPGIKLPDNIVAVSDLKE   89 (365)
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEecccccchHHHHHHHhcCCCcccCCCCcCCCceEEecCHHH
Confidence            468999996 999999999999887       789999998752     100    01111122111   2222335567


Q ss_pred             hhccccEEEEcccCcCh
Q 046878           68 ILKEVGVVISTVAYPQL   84 (104)
Q Consensus        68 ~~~~~d~vv~~a~~~~~   84 (104)
                      +++++|+|+.+.++..+
T Consensus        90 av~~aDiIvlAVPsq~l  106 (365)
T PTZ00345         90 AVEDADLLIFVIPHQFL  106 (365)
T ss_pred             HHhcCCEEEEEcChHHH
Confidence            88899999988887553

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.98  E-value=6.7e-05  Score=48.62  Aligned_cols=58  Identities=17%  Similarity=0.281  Sum_probs=44.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+|+++.+|+.++..|...|..|+++.++..                     ++.+.++++|+||.++|.+.
T Consensus       156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l~~~~~~ADIVIsAvg~p~  213 (286)
T PRK14175        156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DMASYLKDADVIVSAVGKPG  213 (286)
T ss_pred             CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHHhhCCEEEECCCCCc
Confidence            56689999999777999999999999999988876531                     23445566777777776654

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=97.98  E-value=3e-05  Score=51.24  Aligned_cols=66  Identities=14%  Similarity=0.205  Sum_probs=45.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.++++++....  .   ..    ..  .+++.++++++|+|+.+.+..
T Consensus       144 l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~--~---~~----~~--~~~l~ell~~aDiVil~lP~t  209 (330)
T PRK12480        144 VKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDL--D---FL----TY--KDSVKEAIKDADIISLHVPAN  209 (330)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhh--h---hh----hc--cCCHHHHHhcCCEEEEeCCCc
Confidence            45578999996 99999999999999999999998764320  0   00    01  123455666777766666654

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.98  E-value=1.6e-05  Score=51.84  Aligned_cols=76  Identities=17%  Similarity=0.235  Sum_probs=49.3

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEc
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      |+..+ .++|+|+|+ |.+|..++..|...|+  +|.+++|+++..+........   ...  ..+..+.+.++|+||.+
T Consensus         1 ~~~~~-~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~---~~~--~~~~~~~~~~aDvViia   73 (307)
T PRK07502          1 MSAPL-FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLG---DRV--TTSAAEAVKGADLVILC   73 (307)
T ss_pred             CCccC-CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCC---cee--cCCHHHHhcCCCEEEEC
Confidence            55443 468999995 9999999999998884  788888876543211111100   001  11234456788999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      ++...
T Consensus        74 vp~~~   78 (307)
T PRK07502         74 VPVGA   78 (307)
T ss_pred             CCHHH
Confidence            88643

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=97.98  E-value=1.2e-05  Score=54.54  Aligned_cols=74  Identities=19%  Similarity=0.223  Sum_probs=48.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-ccc--ccc----------ccccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EIH--KEF----------QELDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~~--~~~----------~d~~~~~~~~~~~~~~d~   74 (104)
                      ++|.|+|. |++|..++..|.+.|++|+++++++.+.+....- ...  +.+          ..+.-..++.++++++|+
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv   79 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV   79 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence            37999996 9999999999999999999999987654221110 000  000          001111234455678899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      ||.+.+.+
T Consensus        80 vii~vpt~   87 (411)
T TIGR03026        80 IIICVPTP   87 (411)
T ss_pred             EEEEeCCC
Confidence            99988865

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.98  E-value=2.2e-05  Score=53.41  Aligned_cols=74  Identities=23%  Similarity=0.329  Sum_probs=52.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ...++++|+|+ |.+|..+++.|...|. ++++++|++.......  ....  .+..+.+++.+.+.++|+||.+.|.+.
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la--~~~g--~~~~~~~~~~~~l~~aDvVI~aT~s~~  254 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELA--EEFG--GEAIPLDELPEALAEADIVISSTGAPH  254 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHH--HHcC--CcEeeHHHHHHHhccCCEEEECCCCCC
Confidence            34578999996 9999999999998886 7889988865431111  1111  023334556777889999999998765

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.97  E-value=4.2e-05  Score=49.82  Aligned_cols=36  Identities=14%  Similarity=0.246  Sum_probs=32.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEE-cC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA-RP   40 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~-r~   40 (104)
                      +..+++.|+|.++.+|..++..|+++|+.|+++. |+
T Consensus       156 ~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT  192 (296)
T PRK14188        156 LSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT  192 (296)
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence            4678999999999999999999999999999984 44

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.97  E-value=2.6e-05  Score=51.31  Aligned_cols=75  Identities=17%  Similarity=0.185  Sum_probs=48.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccc------cccccccChHHHHHhhccccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIH------KEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~------~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      ++++||.|+|+ |.+|..++..++..|. ++.+++.+++... ....+..      .....+....++ +.++++|+||.
T Consensus         4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~-~~~ld~~~~~~~~~~~~~I~~~~d~-~~l~~aDiVI~   80 (321)
T PTZ00082          4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQ-GKALDISHSNVIAGSNSKVIGTNNY-EDIAGSDVVIV   80 (321)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhh-HHHHHHHhhhhccCCCeEEEECCCH-HHhCCCCEEEE
Confidence            34579999996 9999999999888884 8889998876431 0111000      000011111122 46789999999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      +++.+
T Consensus        81 tag~~   85 (321)
T PTZ00082         81 TAGLT   85 (321)
T ss_pred             CCCCC
Confidence            99874

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.97  E-value=0.0002  Score=44.24  Aligned_cols=35  Identities=17%  Similarity=0.170  Sum_probs=30.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~   40 (104)
                      ++..+|+|+|+ |.+|..++..|...|. ++++++.+
T Consensus        19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            45578999997 9999999999999997 68888887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.96  E-value=1.1e-05  Score=52.25  Aligned_cols=74  Identities=9%  Similarity=0.166  Sum_probs=48.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccc-cccccccccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLE-IHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ..++++|+|+ |..|++++..|...|. ++++++|+.++.+... ... .... ..+...+++.+.+.++|+||++.+.
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~-~~~~~~~~~~~~~~~aDiVInaTp~  202 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPA-ARATAGSDLAAALAAADGLVHATPT  202 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCC-eEEEeccchHhhhCCCCEEEECCcC
Confidence            4468999997 9999999999999986 7999999875542211 000 0000 0111223345567789999999643

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.96  E-value=0.00014  Score=44.86  Aligned_cols=91  Identities=19%  Similarity=0.210  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc--------------------ccccc-ccc-----c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS--------------------KLEIH-KEF-----Q   57 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~--------------------~~~~~-~~~-----~   57 (104)
                      +...+|+|+|+ |.+|..+++.|...|. ++++++.+.-......                    ..... +..     .
T Consensus        19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~   97 (202)
T TIGR02356        19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK   97 (202)
T ss_pred             hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence            45578999996 9999999999999996 7888887632211000                    00000 000     0


Q ss_pred             cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      ...+.+.+.+.++++|+||.+....  .....+-+.|.+.+
T Consensus        98 ~~i~~~~~~~~~~~~D~Vi~~~d~~--~~r~~l~~~~~~~~  136 (202)
T TIGR02356        98 ERVTAENLELLINNVDLVLDCTDNF--ATRYLINDACVALG  136 (202)
T ss_pred             hcCCHHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC
Confidence            1223456677789999999987653  33445556666665

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=97.96  E-value=1.3e-05  Score=51.67  Aligned_cols=69  Identities=25%  Similarity=0.290  Sum_probs=45.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++|.|+|. |.+|..++..|.+.|++|.+++++++..+........   ....+.   .+.+.++|+||.+.+...
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~---~~~~~~---~~~~~~aDlVilavp~~~   69 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLV---DEASTD---LSLLKDCDLVILALPIGL   69 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCc---ccccCC---HhHhcCCCEEEEcCCHHH
Confidence            37999995 9999999999999999999999876543211111111   111111   124567888888887643

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=97.95  E-value=4.6e-05  Score=49.85  Aligned_cols=71  Identities=17%  Similarity=0.189  Sum_probs=44.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChhh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLD   86 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~   86 (104)
                      -++.|+|++|+.|..+++.|..+.+ ++..++.+.. .            . ..+   ..+.++++|++|.+++...   
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~-~------------~-~~~---~~~~~~~~D~vFlalp~~~---   61 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR-K------------D-AAE---RAKLLNAADVAILCLPDDA---   61 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc-c------------C-cCC---HhHhhcCCCEEEECCCHHH---
Confidence            3799999999999999999999753 4544433321 1            0 111   2344567898888887542   


Q ss_pred             HHHHHHHHHHhC
Q 046878           87 QLKIVDAIKVAG   98 (104)
Q Consensus        87 ~~~l~~~~~~~~   98 (104)
                      ...++..+.+.+
T Consensus        62 s~~~~~~~~~~g   73 (310)
T TIGR01851        62 AREAVSLVDNPN   73 (310)
T ss_pred             HHHHHHHHHhCC
Confidence            344444444443

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=97.95  E-value=4.3e-05  Score=54.36  Aligned_cols=87  Identities=20%  Similarity=0.303  Sum_probs=63.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChhh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLLD   86 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~~   86 (104)
                      .+++|+|. |.+|+.+++.|.++|+++++++.+++..+............|.++++.+.++ ++++|.++.+....  +.
T Consensus       401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~--~~  477 (621)
T PRK03562        401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP--QT  477 (621)
T ss_pred             CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCH--HH
Confidence            57999997 9999999999999999999999998766433332222223489999988776 78899998888653  23


Q ss_pred             HHHHHHHHHHh
Q 046878           87 QLKIVDAIKVA   97 (104)
Q Consensus        87 ~~~l~~~~~~~   97 (104)
                      ...++..+++.
T Consensus       478 n~~i~~~ar~~  488 (621)
T PRK03562        478 SLQLVELVKEH  488 (621)
T ss_pred             HHHHHHHHHHh
Confidence            34444455444

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.94  E-value=2.8e-05  Score=46.29  Aligned_cols=70  Identities=13%  Similarity=0.152  Sum_probs=45.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+|- |++|+.+++.|...|.+|.+...+|-..  .+  -..    |-.+...+.+++..+|++|.+.|...
T Consensus        21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a--lq--A~~----dGf~v~~~~~a~~~adi~vtaTG~~~   90 (162)
T PF00670_consen   21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA--LQ--AAM----DGFEVMTLEEALRDADIFVTATGNKD   90 (162)
T ss_dssp             -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH--HH--HHH----TT-EEE-HHHHTTT-SEEEE-SSSSS
T ss_pred             eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH--HH--hhh----cCcEecCHHHHHhhCCEEEECCCCcc
Confidence            45678999997 9999999999999999999999887433  10  001    11122346777889999999999765

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.94  E-value=0.00013  Score=48.49  Aligned_cols=83  Identities=12%  Similarity=0.137  Sum_probs=47.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      .+|.|+||||++|+.+++.|..+ ..+   +..+.......+...-....-.+.++ +++    .+.++|++|.+++...
T Consensus         6 ~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~~~~l~v~~~-~~~----~~~~~Divf~a~~~~~   80 (347)
T PRK06728          6 YHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFKGREIIIQEA-KIN----SFEGVDIAFFSAGGEV   80 (347)
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeCCcceEEEeC-CHH----HhcCCCEEEECCChHH
Confidence            58999999999999999999864 445   54454432222111100000111122 332    2468999999997643


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                         ...+...+.+++
T Consensus        81 ---s~~~~~~~~~~G   92 (347)
T PRK06728         81 ---SRQFVNQAVSSG   92 (347)
T ss_pred             ---HHHHHHHHHHCC
Confidence               345555554444

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=97.94  E-value=2.3e-05  Score=50.81  Aligned_cols=69  Identities=23%  Similarity=0.343  Sum_probs=48.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++|.-+| .|.+|.+++.+|+.+||.|++.+|+.++.+......       ..-.++-.+..+.+|+||.+.+.+.
T Consensus        35 ~~~iGFIG-LG~MG~~M~~nLik~G~kVtV~dr~~~k~~~f~~~G-------a~v~~sPaeVae~sDvvitmv~~~~  103 (327)
T KOG0409|consen   35 KTRIGFIG-LGNMGSAMVSNLIKAGYKVTVYDRTKDKCKEFQEAG-------ARVANSPAEVAEDSDVVITMVPNPK  103 (327)
T ss_pred             cceeeEEe-eccchHHHHHHHHHcCCEEEEEeCcHHHHHHHHHhc-------hhhhCCHHHHHhhcCEEEEEcCChH
Confidence            57899999 599999999999999999999999986652211100       1111223455667888888887653

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=97.93  E-value=4.2e-05  Score=52.72  Aligned_cols=72  Identities=15%  Similarity=0.141  Sum_probs=47.8

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-ccccccccccChHHHHHhhccccEEEEcccCc
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |.++|. |.+|.+++..|+++|++|.+.+|++++.+..... ..-..+....+++++.+.++.+|+|+.+.+..
T Consensus         2 IG~IGL-G~MG~~mA~nL~~~G~~V~v~drt~~~~~~l~~~~~~g~~~~~~~s~~e~v~~l~~~dvIil~v~~~   74 (467)
T TIGR00873         2 IGVIGL-AVMGSNLALNMADHGFTVSVYNRTPEKTDEFLAEHAKGKKIVGAYSIEEFVQSLERPRKIMLMVKAG   74 (467)
T ss_pred             EEEEee-HHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhhccCCCCceecCCHHHHHhhcCCCCEEEEECCCc
Confidence            789995 9999999999999999999999987665322111 00000112334555555566677777776653

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=97.93  E-value=6.7e-05  Score=49.88  Aligned_cols=66  Identities=20%  Similarity=0.309  Sum_probs=50.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      +++|.|+|+ |.+|+-++..-...|+++.+++-++..+  ..+........+++|++.+.++...+|+|
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~P--A~~va~~~i~~~~dD~~al~ela~~~DVi   66 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAP--AAQVADRVIVAAYDDPEALRELAAKCDVI   66 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCc--hhhcccceeecCCCCHHHHHHHHhhCCEE
Confidence            368999997 9999999999999999999998665444  12221112223778899999999999977

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=97.93  E-value=3.9e-05  Score=48.21  Aligned_cols=69  Identities=19%  Similarity=0.261  Sum_probs=43.7

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHH-------hhccccEEEEcccC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIIS-------ILKEVGVVISTVAY   81 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~-------~~~~~d~vv~~a~~   81 (104)
                      +++=-.++|.+|.++++.|.++|++|+++++.....  ..  ...  ..|+.+.++..+       .+.++|++||+||.
T Consensus        17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l~--~~--~~~--~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv   90 (227)
T TIGR02114        17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRALK--PE--PHP--NLSIREIETTKDLLITLKELVQEHDILIHSMAV   90 (227)
T ss_pred             eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhcc--cc--cCC--cceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence            333335589999999999999999999887632111  00  000  124444443333       23568999999997


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      ..
T Consensus        91 ~d   92 (227)
T TIGR02114        91 SD   92 (227)
T ss_pred             cc
Confidence            54

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.92  E-value=0.00012  Score=48.68  Aligned_cols=91  Identities=21%  Similarity=0.249  Sum_probs=58.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc----------------------cccccc-ccc----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT----------------------SKLEIH-KEF----   56 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~----------------------~~~~~~-~~~----   56 (104)
                      ++..+|+|+|+ |.+|.+++..|...|. ++.+++.+.-.....                      ...... +.+    
T Consensus        22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~  100 (339)
T PRK07688         22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA  100 (339)
T ss_pred             hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence            34578999997 9999999999999996 898988863111000                      000000 100    


Q ss_pred             -ccccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           57 -QELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        57 -~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                       ..-.+++++.+.++++|+||.+....  .....+-+.|.+.+
T Consensus       101 ~~~~~~~~~~~~~~~~~DlVid~~Dn~--~~r~~ln~~~~~~~  141 (339)
T PRK07688        101 IVQDVTAEELEELVTGVDLIIDATDNF--ETRFIVNDAAQKYG  141 (339)
T ss_pred             EeccCCHHHHHHHHcCCCEEEEcCCCH--HHHHHHHHHHHHhC
Confidence             01123456677788999999997743  34445667777665

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.92  E-value=0.00013  Score=48.14  Aligned_cols=76  Identities=13%  Similarity=0.180  Sum_probs=48.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCC--cccccccccc--c--ccccccChHHHHHhhcccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTE--NSRTSKLEIH--K--EFQELDEHEKIISILKEVG   73 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~--~~~~~~~~~~--~--~~~d~~~~~~~~~~~~~~d   73 (104)
                      +.||.|+|++|.+|++++..|...+.       ++.+++.....  .. ....+..  .  ...+..-...-.+.++++|
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~-g~a~Dl~~~~~~~~~~~~i~~~~~~~~~daD   81 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALE-GVAMELEDCAFPLLAGVVATTDPEEAFKDVD   81 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccc-hHHHHHhhccccccCCcEEecChHHHhCCCC
Confidence            45899999989999999999987763       68888875422  21 0111100  0  0001100122356789999


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      +||.++|.+.
T Consensus        82 vVVitAG~~~   91 (323)
T TIGR01759        82 AALLVGAFPR   91 (323)
T ss_pred             EEEEeCCCCC
Confidence            9999999865

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.92  E-value=2.8e-05  Score=49.70  Aligned_cols=70  Identities=17%  Similarity=0.201  Sum_probs=44.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC---CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      |++|.|+|+ |.+|..++..|.+.+   +++.+++|+++..+.....  .. +. ..  ++..+.+.++|+||.+..+..
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~--~g-~~-~~--~~~~~~~~~advVil~v~~~~   74 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEE--YG-VR-AA--TDNQEAAQEADVVVLAVKPQV   74 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHh--cC-Ce-ec--CChHHHHhcCCEEEEEcCHHH
Confidence            358999996 999999999999888   6788888876443111110  00 00 11  112334567788887776543

>PRK06932 glycerate dehydrogenase; Provisional

Probab=97.91  E-value=0.00011  Score=48.31  Aligned_cols=64  Identities=14%  Similarity=0.190  Sum_probs=44.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|- |.||+++++.+..-|.+|...++.....     ..        ....++.++++.+|+|+.+.+.+
T Consensus       145 l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~~~~~-----~~--------~~~~~l~ell~~sDiv~l~~Plt  208 (314)
T PRK06932        145 VRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHKGASV-----CR--------EGYTPFEEVLKQADIVTLHCPLT  208 (314)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCcccc-----cc--------cccCCHHHHHHhCCEEEEcCCCC
Confidence            45689999995 9999999999998899988876543211     00        01124566677777777666643

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=97.90  E-value=3.7e-05  Score=50.72  Aligned_cols=71  Identities=20%  Similarity=0.161  Sum_probs=48.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++.++|.|+|. |.+|.+++..|...|++|.+..++..+...  ...... +. ..   +..++++.+|+|+.+.+...
T Consensus        15 L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~s~~--~A~~~G-~~-~~---s~~eaa~~ADVVvLaVPd~~   85 (330)
T PRK05479         15 IKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSKSWK--KAEADG-FE-VL---TVAEAAKWADVIMILLPDEV   85 (330)
T ss_pred             hCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchhhHH--HHHHCC-Ce-eC---CHHHHHhcCCEEEEcCCHHH
Confidence            45689999996 999999999999999998887766433211  111000 11 11   34667788899998888643

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.90  E-value=2.1e-05  Score=50.48  Aligned_cols=72  Identities=17%  Similarity=0.264  Sum_probs=45.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .++++|+|+ |.+|++++..|...|.++++++|+.++.+.. .......... ....+.  ..+.++|+||++++..
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~-~~~~~~--~~~~~~DivInatp~g  189 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQ-AFSMDE--LPLHRVDLIINATSAG  189 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceE-Eechhh--hcccCccEEEECCCCC
Confidence            468999997 8999999999999999999999886543111 0000000000 011111  1235789999998764

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.88  E-value=0.00035  Score=40.68  Aligned_cols=87  Identities=21%  Similarity=0.192  Sum_probs=54.7

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-------------cc-------ccc-ccc-----ccccC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-------------KL-------EIH-KEF-----QELDE   61 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-------------~~-------~~~-~~~-----~d~~~   61 (104)
                      +++|+|+ |.+|.++++.|...|. ++++++.+.-......             +.       ... +..     ....+
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            5899997 9999999999999996 6888876532211000             00       000 000     01112


Q ss_pred             hHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           62 HEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        62 ~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      .+...+.+.+.|+||.+...  ......+.+.|.+.+
T Consensus        80 ~~~~~~~~~~~diVi~~~d~--~~~~~~l~~~~~~~~  114 (143)
T cd01483          80 EDNLDDFLDGVDLVIDAIDN--IAVRRALNRACKELG  114 (143)
T ss_pred             hhhHHHHhcCCCEEEECCCC--HHHHHHHHHHHHHcC
Confidence            23335667899999999887  345567778888765

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=97.88  E-value=6.4e-05  Score=48.68  Aligned_cols=75  Identities=24%  Similarity=0.283  Sum_probs=46.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--ccc-ccccc-cccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEI-HKEFQ-ELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~-~~~~~-d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++|.|+|+ |.+|..++..|.+.|++|++++|+++..+....  ... ..... .....++.... +++|+||.+.....
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~   78 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ   78 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc
Confidence            37999997 999999999999999999999996544321111  100 00000 00001112222 67899999888765


Q ss_pred             h
Q 046878           84 L   84 (104)
Q Consensus        84 ~   84 (104)
                      .
T Consensus        79 ~   79 (304)
T PRK06522         79 L   79 (304)
T ss_pred             H
Confidence            3

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.87  E-value=2.4e-05  Score=51.06  Aligned_cols=75  Identities=13%  Similarity=0.174  Sum_probs=48.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-----cccccc-------cccccChHHHHHhhccccE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-----LEIHKE-------FQELDEHEKIISILKEVGV   74 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-----~~~~~~-------~~d~~~~~~~~~~~~~~d~   74 (104)
                      .++|.|+|+ |.+|..++..|...|++|++++++++..+....     ......       ...+.-..+..++++++|+
T Consensus         4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl   82 (311)
T PRK06130          4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL   82 (311)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence            358999997 999999999999999999999987655421111     000000       0001111234455778899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      ||-+.+..
T Consensus        83 Vi~av~~~   90 (311)
T PRK06130         83 VIEAVPEK   90 (311)
T ss_pred             EEEeccCc
Confidence            88888764

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.87  E-value=0.00024  Score=44.64  Aligned_cols=91  Identities=18%  Similarity=0.188  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc--------c------------ccc-cc--c---c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK--------L------------EIH-KE--F---Q   57 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~--------~------------~~~-~~--~---~   57 (104)
                      +...+|+|+|+ |.+|.++++.|...|. ++++++.+.-.......        .            ... +.  +   .
T Consensus        19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~   97 (228)
T cd00757          19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN   97 (228)
T ss_pred             HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence            34578999997 9999999999999995 67777654311110000        0            000 00  0   0


Q ss_pred             cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      ...+.+.+.+.++++|+||.|....  .....+-+.|.+.+
T Consensus        98 ~~i~~~~~~~~~~~~DvVi~~~d~~--~~r~~l~~~~~~~~  136 (228)
T cd00757          98 ERLDAENAEELIAGYDLVLDCTDNF--ATRYLINDACVKLG  136 (228)
T ss_pred             ceeCHHHHHHHHhCCCEEEEcCCCH--HHHHHHHHHHHHcC
Confidence            1113456677788999999998754  33345556676665

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.86  E-value=8.3e-05  Score=48.61  Aligned_cols=73  Identities=21%  Similarity=0.256  Sum_probs=47.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccc-ccccccc---cc-ccccChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRT-SKLEIHK---EF-QELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~-~~~~~~~---~~-~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      ++|.|+|+ |.+|+.++..|+..|  +++.+++++++..+.. .......   .. ..... .. .+.+.++|+||+++|
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~-~~-~~~l~~aDIVIitag   77 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA-GD-YSDCKDADIVVITAG   77 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc-CC-HHHhCCCCEEEEccC
Confidence            37999996 999999999999888  5899999987654211 0000000   00 00110 11 234689999999999


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      .+.
T Consensus        78 ~~~   80 (306)
T cd05291          78 APQ   80 (306)
T ss_pred             CCC
Confidence            864

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=97.86  E-value=0.00018  Score=45.94  Aligned_cols=35  Identities=20%  Similarity=0.465  Sum_probs=27.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEE-EEEcCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTF-VYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~-~~~r~~   41 (104)
                      +++|+|.|++|.+|+.+++.+.+.. .++. .+.|.+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            4689999999999999999998765 4544 445544

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=97.86  E-value=5.7e-05  Score=48.46  Aligned_cols=68  Identities=19%  Similarity=0.271  Sum_probs=39.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEE-EEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTF-VYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++.|+|+ |.+|+.+++.+.+.+  .++. +++++++..+....  ... ...+.+   +.+++.++|+|+.|+++.
T Consensus         2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~--~~~-~~~~~~---~~ell~~~DvVvi~a~~~   72 (265)
T PRK13304          2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEKAENLAS--KTG-AKACLS---IDELVEDVDLVVECASVN   72 (265)
T ss_pred             CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHH--hcC-CeeECC---HHHHhcCCCEEEEcCChH
Confidence            58999996 999999999998753  4544 44554432211100  000 011233   333446788888888653

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=97.86  E-value=0.00031  Score=43.12  Aligned_cols=79  Identities=14%  Similarity=0.188  Sum_probs=53.2

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccC-hHHHHHhhccccEEEEcccC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDE-HEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~-~~~~~~~~~~~d~vv~~a~~   81 (104)
                      .++.+++.|+|.+.-+|+.++..|.+++..|+++..+.-.... .....+..  ....+ ++.+.+.++++|+||.++|.
T Consensus        59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~~~~~~hs~--t~~~~~~~~l~~~~~~ADIVIsAvG~  136 (197)
T cd01079          59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTRGESIRHEK--HHVTDEEAMTLDCLSQSDVVITGVPS  136 (197)
T ss_pred             CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccccccccccccc--ccccchhhHHHHHhhhCCEEEEccCC
Confidence            3667899999999999999999999999999988544322100 00000000  01112 23467778999999999998


Q ss_pred             cCh
Q 046878           82 PQL   84 (104)
Q Consensus        82 ~~~   84 (104)
                      +.+
T Consensus       137 ~~~  139 (197)
T cd01079         137 PNY  139 (197)
T ss_pred             CCC
Confidence            764

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=97.86  E-value=0.00011  Score=48.36  Aligned_cols=83  Identities=12%  Similarity=0.153  Sum_probs=46.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCe---EEEEE--cCCCCcccccccccccccc-cccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHN---TFVYA--RPVTENSRTSKLEIHKEFQ-ELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~--r~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++|.|+|+||.+|+.+++.|.+...+   +.++.  |+..+. ...-..+..... +..+..    .++++|++|.++|.
T Consensus         2 ~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~-~~~f~~~~~~v~~~~~~~~----~~~~~Divf~~ag~   76 (334)
T COG0136           2 LNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKK-YIEFGGKSIGVPEDAADEF----VFSDVDIVFFAAGG   76 (334)
T ss_pred             cEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCc-cccccCccccCcccccccc----ccccCCEEEEeCch
Confidence            58999999999999999999986532   33332  332222 011111111011 112211    23489999999986


Q ss_pred             cChhhHHHHHHHHHHhC
Q 046878           82 PQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        82 ~~~~~~~~l~~~~~~~~   98 (104)
                      ..   +..+...+.++|
T Consensus        77 ~~---s~~~~p~~~~~G   90 (334)
T COG0136          77 SV---SKEVEPKAAEAG   90 (334)
T ss_pred             HH---HHHHHHHHHHcC
Confidence            53   245555555554

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=97.84  E-value=3.1e-05  Score=53.70  Aligned_cols=74  Identities=12%  Similarity=0.146  Sum_probs=49.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--------cccccc--c---ccccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--------LEIHKE--F---QELDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--------~~~~~~--~---~d~~~~~~~~~~~~~~d~   74 (104)
                      ++|.|+|+ |.+|..++..|+.+|++|++.+++++..+....        ......  .   ..+.-.+++.++++++|+
T Consensus         5 ~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~   83 (495)
T PRK07531          5 MKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW   83 (495)
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence            58999996 999999999999999999999998765421100        000000  0   011112345667788999


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      |+-+.+..
T Consensus        84 Vieavpe~   91 (495)
T PRK07531         84 IQESVPER   91 (495)
T ss_pred             EEEcCcCC
Confidence            99887765

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.84  E-value=0.00039  Score=44.09  Aligned_cols=91  Identities=14%  Similarity=0.127  Sum_probs=57.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccc-------------c----cc----ccc-----c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKL-------------E----IH----KEF-----Q   57 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~-------------~----~~----~~~-----~   57 (104)
                      ++..+|+|+|+ |.+|..+++.|...|. ++++++.+.-........             +    .+    +..     .
T Consensus        22 L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~  100 (240)
T TIGR02355        22 LKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPIN  100 (240)
T ss_pred             HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            34568999997 9999999999999995 788887764322110000             0    00    000     0


Q ss_pred             cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      ...+.+.+.+.++++|+||.+.....  ....+-+.|.+.+
T Consensus       101 ~~i~~~~~~~~~~~~DlVvd~~D~~~--~r~~ln~~~~~~~  139 (240)
T TIGR02355       101 AKLDDAELAALIAEHDIVVDCTDNVE--VRNQLNRQCFAAK  139 (240)
T ss_pred             ccCCHHHHHHHhhcCCEEEEcCCCHH--HHHHHHHHHHHcC
Confidence            22234567777899999999987643  3344556676665

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.83  E-value=7e-05  Score=51.10  Aligned_cols=87  Identities=15%  Similarity=0.122  Sum_probs=52.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccccc-ccccccChHHHHHhhc-cccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHK-EFQELDEHEKIISILK-EVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~-~~~d~~~~~~~~~~~~-~~d~vv~~a~~   81 (104)
                      ++.++++|+|+ |.+|.+.++.|.+.|+.|.+.+++....... ....... .+..-.++..   .+. ++|+||.+.|.
T Consensus         3 ~~~k~v~v~G~-g~~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~d~vV~s~gi   78 (447)
T PRK02472          3 YQNKKVLVLGL-AKSGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGSHPLE---LLDEDFDLMVKNPGI   78 (447)
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCCCCHH---HhcCcCCEEEECCCC
Confidence            35578999998 5599999999999999999988765322110 1111101 0000011221   233 48999999987


Q ss_pred             cChhhHHHHHHHHHHhC
Q 046878           82 PQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        82 ~~~~~~~~l~~~~~~~~   98 (104)
                      +.   ..++++++++.+
T Consensus        79 ~~---~~~~~~~a~~~~   92 (447)
T PRK02472         79 PY---TNPMVEKALEKG   92 (447)
T ss_pred             CC---CCHHHHHHHHCC
Confidence            64   235555665554

>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional

Probab=97.83  E-value=0.00012  Score=49.28  Aligned_cols=35  Identities=20%  Similarity=0.284  Sum_probs=30.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      +..++++|+|. |.+|+.+++.|...|.+|.+.++.
T Consensus       114 L~gktvGIIG~-G~IG~~vA~~l~a~G~~V~~~dp~  148 (378)
T PRK15438        114 LHDRTVGIVGV-GNVGRRLQARLEALGIKTLLCDPP  148 (378)
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCc
Confidence            45689999996 999999999999999999888753

>PRK06928 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.83  E-value=3.3e-05  Score=49.83  Aligned_cols=70  Identities=16%  Similarity=0.214  Sum_probs=44.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCCCccccccc-ccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTENSRTSKL-EIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++|.++|+ |.+|.+++..|.+.+    +++.+++|+++..  .... ...... ..  ..+..+++.++|+||.+.++.
T Consensus         2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~--~~~l~~~~~~~-~~--~~~~~e~~~~aDvVilavpp~   75 (277)
T PRK06928          2 EKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSKNEH--FNQLYDKYPTV-EL--ADNEAEIFTKCDHSFICVPPL   75 (277)
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCcHHH--HHHHHHHcCCe-EE--eCCHHHHHhhCCEEEEecCHH
Confidence            57999996 999999999999887    6788888865321  0100 000000 01  112234567889999888865


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        76 ~   76 (277)
T PRK06928         76 A   76 (277)
T ss_pred             H
Confidence            4

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.83  E-value=7e-05  Score=49.29  Aligned_cols=75  Identities=15%  Similarity=0.188  Sum_probs=49.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccccccc--ccccc-c---ccccChHHHHHhhccccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKL--EIHKE-F---QELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~--~~~~~-~---~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      +.+||.|+|| |.+|+.++..+...+ .++.+++++++.... ...  .+... .   ..+....+++ .++++|+||.+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g-~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVit   80 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQG-KALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVIT   80 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchh-HHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEEC
Confidence            4569999997 999999999888888 688899987654321 001  00000 0   0111112344 67999999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      +|.+.
T Consensus        81 ag~~~   85 (319)
T PTZ00117         81 AGVQR   85 (319)
T ss_pred             CCCCC
Confidence            97654

>PRK05442 malate dehydrogenase; Provisional

Probab=97.83  E-value=0.00028  Score=46.69  Aligned_cols=77  Identities=13%  Similarity=0.150  Sum_probs=47.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCc-cccccccccc---cc-ccccChHHHHHhhccccE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTEN-SRTSKLEIHK---EF-QELDEHEKIISILKEVGV   74 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~-~~~~~~~~~~---~~-~d~~~~~~~~~~~~~~d~   74 (104)
                      +.||.|+|++|.+|+.++..|...+.       ++.++++.+... ......+...   .. .+..-.....+.++++|+
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~y~~~~daDi   83 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVITDDPNVAFKDADV   83 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEecChHHHhCCCCE
Confidence            45899999889999999999887552       688888754321 0111111000   00 010001123567899999


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      ||.++|.+.
T Consensus        84 VVitaG~~~   92 (326)
T PRK05442         84 ALLVGARPR   92 (326)
T ss_pred             EEEeCCCCC
Confidence            999999754

>PLN02688 pyrroline-5-carboxylate reductase

Probab=97.82  E-value=3.4e-05  Score=49.23  Aligned_cols=67  Identities=13%  Similarity=0.142  Sum_probs=43.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC----eEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH----NTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~----~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++|.++|. |.+|.++++.|++.|+    +++++ +|++++.+....   .. ..-.   ++..+++.++|+||.+..+.
T Consensus         1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~---~g-~~~~---~~~~e~~~~aDvVil~v~~~   72 (266)
T PLN02688          1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQS---LG-VKTA---ASNTEVVKSSDVIILAVKPQ   72 (266)
T ss_pred             CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHH---cC-CEEe---CChHHHHhcCCEEEEEECcH
Confidence            47999995 9999999999999887    77777 665543311111   11 1111   12234466789998888543

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.82  E-value=4.9e-05  Score=49.58  Aligned_cols=74  Identities=15%  Similarity=0.210  Sum_probs=47.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccc--ccccc----ccccChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLE--IHKEF----QELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~--~~~~~----~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      |+||.|+|+ |.+|..++..+...|. ++.+++++++.... ...+  .....    ..+....++ +.++++|+||.++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~-~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~   78 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQG-KALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITA   78 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHH-HHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECC
Confidence            368999998 9999999999988765 89999987654311 0000  00000    011111123 3578999999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      +.+.
T Consensus        79 ~~p~   82 (307)
T PRK06223         79 GVPR   82 (307)
T ss_pred             CCCC
Confidence            7654

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=97.82  E-value=0.00023  Score=46.97  Aligned_cols=37  Identities=19%  Similarity=0.301  Sum_probs=32.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ...+++.|+| .|.||+++++.+..-|.+|...+|++.
T Consensus       144 l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~  180 (324)
T COG1052         144 LRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPN  180 (324)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCC
Confidence            4568999999 599999999999977889999888874

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=97.81  E-value=0.00024  Score=42.35  Aligned_cols=37  Identities=14%  Similarity=0.253  Sum_probs=28.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ...++++|+|.++.+|+.++..|.+++..|+.+.+..
T Consensus        34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T   70 (160)
T PF02882_consen   34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT   70 (160)
T ss_dssp             TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS
T ss_pred             CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC
Confidence            5668999999999999999999999998888866554

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK08605 D-lactate dehydrogenase; Validated

Probab=97.81  E-value=0.00015  Score=47.98  Aligned_cols=67  Identities=15%  Similarity=0.220  Sum_probs=44.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHH-hCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASV-SSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~-~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..+++.|+|. |.+|+++++.|. ..|.+|++.+++.... ..   ..      ..-.+++.++++++|+|+.+++..
T Consensus       144 l~g~~VgIIG~-G~IG~~vA~~L~~~~g~~V~~~d~~~~~~-~~---~~------~~~~~~l~ell~~aDvIvl~lP~t  211 (332)
T PRK08605        144 IKDLKVAVIGT-GRIGLAVAKIFAKGYGSDVVAYDPFPNAK-AA---TY------VDYKDTIEEAVEGADIVTLHMPAT  211 (332)
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHhcCCCEEEEECCCccHh-HH---hh------ccccCCHHHHHHhCCEEEEeCCCC
Confidence            45679999996 999999999994 4577888777654321 00   00      111124566677788887777654

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.81  E-value=0.00042  Score=43.16  Aligned_cols=90  Identities=23%  Similarity=0.251  Sum_probs=55.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC---CCcccc----c-----ccc----cc----ccc-----cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV---TENSRT----S-----KLE----IH----KEF-----QE   58 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~---~~~~~~----~-----~~~----~~----~~~-----~d   58 (104)
                      ++..+|+|+|+ |.+|..+++.|...|. ++++++.+.   +.....    .     +.+    .+    +..     ..
T Consensus        26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~  104 (212)
T PRK08644         26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE  104 (212)
T ss_pred             HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence            34578999997 9999999999999996 588888762   111100    0     000    00    000     01


Q ss_pred             ccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHh
Q 046878           59 LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVA   97 (104)
Q Consensus        59 ~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~   97 (104)
                      ..+.+.+.+.++++|+||.+....  .....+.+.+.+.
T Consensus       105 ~i~~~~~~~~~~~~DvVI~a~D~~--~~r~~l~~~~~~~  141 (212)
T PRK08644        105 KIDEDNIEELFKDCDIVVEAFDNA--ETKAMLVETVLEH  141 (212)
T ss_pred             ecCHHHHHHHHcCCCEEEECCCCH--HHHHHHHHHHHHh
Confidence            123445667788999999995443  3334555666655

>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial

Probab=97.81  E-value=0.00015  Score=48.55  Aligned_cols=82  Identities=11%  Similarity=0.189  Sum_probs=48.0

Q ss_pred             CeEEEEccCChhhHHHHHHHH-hCCCe---EEEEEcCCC--CcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASV-SSGHN---TFVYARPVT--ENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~-~~~~~---v~~~~r~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++|.|+||||.+|+.+++.|. +..++   +..++.+..  +........  ..+.++.+.    +.+.++|++|.++|.
T Consensus         1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~~~~--~~v~~~~~~----~~~~~vDivffa~g~   74 (366)
T TIGR01745         1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFGGTT--GTLQDAFDI----DALKALDIIITCQGG   74 (366)
T ss_pred             CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCCCCc--ceEEcCccc----ccccCCCEEEEcCCH
Confidence            379999999999999999999 44544   334333222  111111111  111233221    235789999999986


Q ss_pred             cChhhHHHHHHHHHHhC
Q 046878           82 PQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        82 ~~~~~~~~l~~~~~~~~   98 (104)
                      .   .+..+...+.++|
T Consensus        75 ~---~s~~~~p~~~~aG   88 (366)
T TIGR01745        75 D---YTNEIYPKLRESG   88 (366)
T ss_pred             H---HHHHHHHHHHhCC
Confidence            5   3456666565554

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.80  E-value=0.00014  Score=47.15  Aligned_cols=33  Identities=12%  Similarity=0.194  Sum_probs=30.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVY   37 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~   37 (104)
                      ...+++.++|.+|.+|+.++..|+++|+.|+++
T Consensus       156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~  188 (284)
T PRK14179        156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT  188 (284)
T ss_pred             CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence            456899999999999999999999999999887

>PRK06545 prephenate dehydrogenase; Validated

Probab=97.80  E-value=5.6e-05  Score=50.45  Aligned_cols=72  Identities=17%  Similarity=0.225  Sum_probs=48.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++|.|+|. |.+|..++..|...|+++.++++++....... ........+.  ..++.++++++|+||-+.++..
T Consensus         1 ~~I~iIG~-GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~-a~~~~~~~~~--~~~~~~~~~~aDlVilavP~~~   72 (359)
T PRK06545          1 RTVLIVGL-GLIGGSLALAIKAAGPDVFIIGYDPSAAQLAR-ALGFGVIDEL--AADLQRAAAEADLIVLAVPVDA   72 (359)
T ss_pred             CeEEEEEe-CHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHH-HhcCCCCccc--ccCHHHHhcCCCEEEEeCCHHH
Confidence            36899995 99999999999999999988888765431111 1111100111  1234566788999999998753

>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=97.80  E-value=0.00022  Score=48.47  Aligned_cols=36  Identities=19%  Similarity=0.224  Sum_probs=31.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +..++++|+|- |.||+.+++.+..-|.+|.+.++.+
T Consensus       149 L~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~  184 (409)
T PRK11790        149 VRGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIED  184 (409)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCc
Confidence            45689999995 9999999999999999999988753

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.79  E-value=8.5e-05  Score=48.27  Aligned_cols=75  Identities=8%  Similarity=0.139  Sum_probs=47.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccc-ccc-------cccccccChHHHHHhhccccEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKL-EIH-------KEFQELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~-~~~-------~~~~d~~~~~~~~~~~~~~d~vv   76 (104)
                      +.++++|+|+ |..+++++..|...|. +++++.|+++..+..... +..       ....++.+.+.+.+.+.++|+||
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI  201 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT  201 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence            4568999997 8889999999998885 799999986421111110 000       00112222223455667899999


Q ss_pred             EcccC
Q 046878           77 STVAY   81 (104)
Q Consensus        77 ~~a~~   81 (104)
                      |+.+.
T Consensus       202 NaTp~  206 (288)
T PRK12749        202 NGTKV  206 (288)
T ss_pred             ECCCC
Confidence            99865

>PRK00257 erythronate-4-phosphate dehydrogenase; Validated

Probab=97.79  E-value=0.00015  Score=48.83  Aligned_cols=35  Identities=20%  Similarity=0.327  Sum_probs=30.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+.++.
T Consensus       114 l~gktvGIIG~-G~IG~~va~~l~a~G~~V~~~Dp~  148 (381)
T PRK00257        114 LAERTYGVVGA-GHVGGRLVRVLRGLGWKVLVCDPP  148 (381)
T ss_pred             cCcCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCc
Confidence            45679999996 999999999999999999888754

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=97.78  E-value=9.5e-05  Score=48.69  Aligned_cols=76  Identities=16%  Similarity=0.141  Sum_probs=52.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      ++.++|.|+|- |.+|+++++.|...|++|.+..|+....   .......    . ...++.++++.+|+|+.+.+..  
T Consensus        14 LkgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~---~~A~~~G----~-~v~sl~Eaak~ADVV~llLPd~--   82 (335)
T PRK13403         14 LQGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSF---EVAKADG----F-EVMSVSEAVRTAQVVQMLLPDE--   82 (335)
T ss_pred             hCcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhh---HHHHHcC----C-EECCHHHHHhcCCEEEEeCCCh--
Confidence            56689999996 9999999999999999998887653221   1111000    1 1125778899999999999853  


Q ss_pred             hhHHHHHH
Q 046878           85 LDQLKIVD   92 (104)
Q Consensus        85 ~~~~~l~~   92 (104)
                       .+..++.
T Consensus        83 -~t~~V~~   89 (335)
T PRK13403         83 -QQAHVYK   89 (335)
T ss_pred             -HHHHHHH
Confidence             2345543

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.77  E-value=5.6e-05  Score=49.68  Aligned_cols=34  Identities=29%  Similarity=0.338  Sum_probs=30.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      |+|.|+|+ |.+|.+++..|.++|++|.+++|+++
T Consensus         1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~   34 (326)
T PRK14620          1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNHT   34 (326)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHH
Confidence            36999997 99999999999999999999999754

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=97.77  E-value=6.9e-05  Score=49.68  Aligned_cols=77  Identities=17%  Similarity=0.311  Sum_probs=48.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----ccccc-c--c-ccccChHHHHHhhccccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK----LEIHK-E--F-QELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~~~~~-~--~-~d~~~~~~~~~~~~~~d~vv   76 (104)
                      ..+++|.|+|+ |.+|..++..|.++| +++++.|+++..+....    ....+ .  + ..+.-..++.+++.++|+||
T Consensus         5 ~~~mkI~IiGa-Ga~G~alA~~La~~g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVi   82 (341)
T PRK12439          5 KREPKVVVLGG-GSWGTTVASICARRG-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVV   82 (341)
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHHCC-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEE
Confidence            34578999997 999999999999988 67777776543311110    01111 0  0 01111233455678899999


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      .+.+...
T Consensus        83 lavps~~   89 (341)
T PRK12439         83 MGVPSHG   89 (341)
T ss_pred             EEeCHHH
Confidence            9988654

>TIGR00465 ilvC ketol-acid reductoisomerase

Probab=97.76  E-value=9.7e-05  Score=48.54  Aligned_cols=69  Identities=16%  Similarity=0.170  Sum_probs=46.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +.++|.|+|+ |.+|.++++.|.+.|+++.+..++.+..  ........ + ...   +..++++++|+|+.+.++.
T Consensus         2 ~~kkIgiIG~-G~mG~AiA~~L~~sG~~Viv~~~~~~~~--~~~a~~~G-v-~~~---s~~ea~~~ADiVvLaVpp~   70 (314)
T TIGR00465         2 KGKTVAIIGY-GSQGHAQALNLRDSGLNVIVGLRKGGAS--WKKATEDG-F-KVG---TVEEAIPQADLIMNLLPDE   70 (314)
T ss_pred             CcCEEEEEeE-cHHHHHHHHHHHHCCCeEEEEECcChhh--HHHHHHCC-C-EEC---CHHHHHhcCCEEEEeCCcH
Confidence            4578999996 9999999999999998876655543221  11111010 1 122   2455678899999999875

This is the second enzyme in the parallel isoleucine-valine biosynthetic pathway

>PRK08818 prephenate dehydrogenase; Provisional

Probab=97.76  E-value=0.00014  Score=48.76  Aligned_cols=60  Identities=13%  Similarity=0.208  Sum_probs=44.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ..++|+|+|.+|.+|..+++.|.+. +++|+++++.++.               ..+   ..+.+.++|+||-|++...
T Consensus         3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~---------------~~~---~~~~v~~aDlVilavPv~~   63 (370)
T PRK08818          3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG---------------SLD---PATLLQRADVLIFSAPIRH   63 (370)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc---------------cCC---HHHHhcCCCEEEEeCCHHH
Confidence            3469999998899999999999864 7788887764210               112   2345678999999998764

>PRK08300 acetaldehyde dehydrogenase; Validated

Probab=97.76  E-value=0.00019  Score=46.87  Aligned_cols=89  Identities=11%  Similarity=0.209  Sum_probs=52.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-CCeEE-EEEcCCCCcccccccccccccccccChHHHHHh--hccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTF-VYARPVTENSRTSKLEIHKEFQELDEHEKIISI--LKEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vv~~a~   80 (104)
                      |++.++.|+| +|.+|+.++..+.+. +.++. +++++++.. .............+.+.+.+.+.  +.++|+||.+++
T Consensus         2 m~klrVAIIG-tG~IGt~hm~~l~~~~~velvAVvdid~es~-gla~A~~~Gi~~~~~~ie~LL~~~~~~dIDiVf~AT~   79 (302)
T PRK08300          2 MSKLKVAIIG-SGNIGTDLMIKILRSEHLEPGAMVGIDPESD-GLARARRLGVATSAEGIDGLLAMPEFDDIDIVFDATS   79 (302)
T ss_pred             CCCCeEEEEc-CcHHHHHHHHHHhcCCCcEEEEEEeCChhhH-HHHHHHHcCCCcccCCHHHHHhCcCCCCCCEEEECCC
Confidence            4567899999 699999988888764 34655 445554322 10111111100123445555443  467999999998


Q ss_pred             CcChhhHHHHHHHHHHhC
Q 046878           81 YPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~   98 (104)
                      ..   .+......+.++|
T Consensus        80 a~---~H~e~a~~a~eaG   94 (302)
T PRK08300         80 AG---AHVRHAAKLREAG   94 (302)
T ss_pred             HH---HHHHHHHHHHHcC
Confidence            64   3455566666665

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.75  E-value=0.0001  Score=48.39  Aligned_cols=74  Identities=14%  Similarity=0.116  Sum_probs=46.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----ccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      .||.|+|+ |.+|+.++..|+..+.  ++.+++.+.+....    ............+....+++ .++++|+||.++|.
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~~adivvitaG~   81 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTANSKVVIVTAGA   81 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhCCCCEEEECCCC
Confidence            58999997 9999999999987763  68888887644311    00000000000111111223 37999999999997


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      +.
T Consensus        82 ~~   83 (312)
T cd05293          82 RQ   83 (312)
T ss_pred             CC
Confidence            54

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=97.75  E-value=0.00012  Score=47.51  Aligned_cols=75  Identities=17%  Similarity=0.153  Sum_probs=45.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--ccccc---cc-ccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--LEIHK---EF-QELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--~~~~~---~~-~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++|+|+|+ |.+|..++..|.+.|++|++++| .+..+....  .....   .. ....-..+..+...++|+||.+...
T Consensus         1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilavk~   78 (305)
T PRK12921          1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEELTGPFDLVILAVKA   78 (305)
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHccCCCCEEEEEecc
Confidence            47999997 99999999999999999999998 433211110  00000   00 0000011223334778999988887


Q ss_pred             cCh
Q 046878           82 PQL   84 (104)
Q Consensus        82 ~~~   84 (104)
                      ...
T Consensus        79 ~~~   81 (305)
T PRK12921         79 YQL   81 (305)
T ss_pred             cCH
Confidence            654

>TIGR00036 dapB dihydrodipicolinate reductase

Probab=97.75  E-value=0.00031  Score=45.17  Aligned_cols=32  Identities=22%  Similarity=0.439  Sum_probs=25.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r   39 (104)
                      ++|+|+|++|.+|+.+++.+.+. +.++.++..
T Consensus         2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d   34 (266)
T TIGR00036         2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE   34 (266)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence            58999998899999999999864 567665443

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.74  E-value=0.00019  Score=47.86  Aligned_cols=77  Identities=22%  Similarity=0.291  Sum_probs=50.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc----cccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK----EVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vv~~a~~   81 (104)
                      +.+.++|.||+|.+|+..++.+...+...++..++.+..+...... .....||.+++-.+...+    ++|+|+.|.|.
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lG-Ad~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~  235 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLG-ADEVVDYKDENVVELIKKYTGKGVDVVLDCVGG  235 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcC-CcEeecCCCHHHHHHHHhhcCCCccEEEECCCC
Confidence            3468999999999999999888877744444455554442222222 112237877554444443    58999999998


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      ..
T Consensus       236 ~~  237 (347)
T KOG1198|consen  236 ST  237 (347)
T ss_pred             Cc
Confidence            53

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=97.73  E-value=0.00017  Score=49.23  Aligned_cols=70  Identities=10%  Similarity=0.084  Sum_probs=48.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+|. |.+|+.++..|...|.+|+++++++.+...... .  . + +..   .+.++++++|+||.++|...
T Consensus       210 l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-~--G-~-~v~---~l~eal~~aDVVI~aTG~~~  279 (425)
T PRK05476        210 IAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-D--G-F-RVM---TMEEAAELGDIFVTATGNKD  279 (425)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-c--C-C-Eec---CHHHHHhCCCEEEECCCCHH
Confidence            35679999997 999999999999999999999888754311100 0  0 0 111   23455678899998887643

>PRK06444 prephenate dehydrogenase; Provisional

Probab=97.72  E-value=8.9e-05  Score=45.67  Aligned_cols=28  Identities=21%  Similarity=0.394  Sum_probs=25.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTF   35 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~   35 (104)
                      +++.|+|++|.+|+.+++.|.+.|+.|+
T Consensus         1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~   28 (197)
T PRK06444          1 MMEIIIGKNGRLGRVLCSILDDNGLGVY   28 (197)
T ss_pred             CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence            4799999999999999999999999875

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.72  E-value=0.00018  Score=43.57  Aligned_cols=78  Identities=14%  Similarity=0.231  Sum_probs=54.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccccccccc--ccccChHHHHHhh-------ccccEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEF--QELDEHEKIISIL-------KEVGVV   75 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~--~d~~~~~~~~~~~-------~~~d~v   75 (104)
                      +....+|+|+...+|.+.++.|..+|..+.+++-..++.... ......-.+  .|++.++++..++       .+.|+.
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            344678999999999999999999999999988776554211 111110011  2777777666654       468999


Q ss_pred             EEcccCcC
Q 046878           76 ISTVAYPQ   83 (104)
Q Consensus        76 v~~a~~~~   83 (104)
                      +||+|...
T Consensus        88 vncagia~   95 (260)
T KOG1199|consen   88 VNCAGIAY   95 (260)
T ss_pred             eeccceee
Confidence            99999854

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.72  E-value=0.00049  Score=44.53  Aligned_cols=76  Identities=16%  Similarity=0.220  Sum_probs=49.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCc--ccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTEN--SRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~--~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ..|+.|.||.|.||+.|.-.| +..+.   ..+.+......  .+..+.........+.-++.++++++++|+|+.-||.
T Consensus        28 ~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDlSHI~T~s~V~g~~g~~~L~~al~~advVvIPAGV  106 (345)
T KOG1494|consen   28 GLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADLSHINTNSSVVGFTGADGLENALKGADVVVIPAGV  106 (345)
T ss_pred             cceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccccccccCCCCceeccCChhHHHHHhcCCCEEEecCCC
Confidence            458999999999999986544 44433   33333332211  1122222222233677788999999999999999998


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      +.
T Consensus       107 PR  108 (345)
T KOG1494|consen  107 PR  108 (345)
T ss_pred             CC
Confidence            76

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=97.72  E-value=0.00023  Score=42.31  Aligned_cols=33  Identities=18%  Similarity=0.240  Sum_probs=29.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~   38 (104)
                      ++.++++|+|| |.+|...++.|++.|++|++++
T Consensus        11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            46689999997 9999999999999999999884

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.71  E-value=0.00065  Score=43.19  Aligned_cols=91  Identities=12%  Similarity=0.111  Sum_probs=56.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-------------cc-------cc-cccc-----c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-------------KL-------EI-HKEF-----Q   57 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-------------~~-------~~-~~~~-----~   57 (104)
                      ++..+|+|+|+ |.+|..+++.|...|. ++++++.+.-......             +.       .. .+..     .
T Consensus        30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~  108 (245)
T PRK05690         30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETIN  108 (245)
T ss_pred             hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence            34578999997 9999999999999995 7777776532211000             00       00 0000     0


Q ss_pred             cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      ...+++.+.+.++++|+||.+....  .....+-+.|.+.+
T Consensus       109 ~~i~~~~~~~~~~~~DiVi~~~D~~--~~r~~ln~~~~~~~  147 (245)
T PRK05690        109 ARLDDDELAALIAGHDLVLDCTDNV--ATRNQLNRACFAAK  147 (245)
T ss_pred             ccCCHHHHHHHHhcCCEEEecCCCH--HHHHHHHHHHHHhC
Confidence            1223455667788999999998654  23344556666654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.71  E-value=0.00031  Score=44.96  Aligned_cols=74  Identities=15%  Similarity=0.160  Sum_probs=48.8

Q ss_pred             EEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCCCccccc-cccccc-c--cccccChHHHHHhhccccEEEEcccC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTENSRTS-KLEIHK-E--FQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~~~~~~~-~~~~~~-~--~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      |.|+|++|.+|..++..|+..+    .++.+++++++...... ...... .  ...+.-.+++.+.++++|+||.+++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~d~~~~~~~aDiVv~t~~~   80 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITDDPYEAFKDADVVIITAGV   80 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECCchHHHhCCCCEEEECCCC
Confidence            5799988999999999999888    68999998775542100 000000 0  01122223456778999999999987


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      +.
T Consensus        81 ~~   82 (263)
T cd00650          81 GR   82 (263)
T ss_pred             CC
Confidence            54

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=97.71  E-value=0.00015  Score=48.08  Aligned_cols=32  Identities=19%  Similarity=0.298  Sum_probs=26.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r   39 (104)
                      ++|+|+|++|++|+++++.|..++ .++..+..
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~   33 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA   33 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence            379999999999999999888876 47766643

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>PRK13303 L-aspartate dehydrogenase; Provisional

Probab=97.71  E-value=0.00026  Score=45.50  Aligned_cols=70  Identities=9%  Similarity=0.109  Sum_probs=39.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++.|+|+ |.+|+.+++.+.+. +.++..+..++......... ......-+.+.+.+   -.++|+|+-|++..
T Consensus         2 ~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~-~~~~~~~~~d~~~l---~~~~DvVve~t~~~   72 (265)
T PRK13303          2 MKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRA-LGEAVRVVSSVDAL---PQRPDLVVECAGHA   72 (265)
T ss_pred             cEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhh-hccCCeeeCCHHHh---ccCCCEEEECCCHH
Confidence            58999998 99999999999875 35655554332221110000 00001113333433   24688888888764

>PLN02256 arogenate dehydrogenase

Probab=97.71  E-value=0.00017  Score=47.24  Aligned_cols=70  Identities=20%  Similarity=0.257  Sum_probs=46.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-ccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-KEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vv~~a~~~~   83 (104)
                      +.+++|.|+|. |.+|..++..|.+.|++|++++++.... ....   .. +....+.   .+.+ .++|+||.++++..
T Consensus        34 ~~~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~~~~-~a~~---~g-v~~~~~~---~e~~~~~aDvVilavp~~~  104 (304)
T PLN02256         34 SRKLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSDYSD-IAAE---LG-VSFFRDP---DDFCEEHPDVVLLCTSILS  104 (304)
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECccHHH-HHHH---cC-CeeeCCH---HHHhhCCCCEEEEecCHHH
Confidence            45578999995 9999999999999899999988875211 1111   11 1122232   2333 36899999888653

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=97.71  E-value=7.8e-05  Score=51.56  Aligned_cols=72  Identities=13%  Similarity=0.210  Sum_probs=47.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|+ |.+|++++..|...|+++.+.+|+..+.+...  ....  ....+.+++. .+.++|+||+|.+..
T Consensus       330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la--~~~~--~~~~~~~~~~-~l~~~DiVInatP~g  401 (477)
T PRK09310        330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALA--SRCQ--GKAFPLESLP-ELHRIDIIINCLPPS  401 (477)
T ss_pred             cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH--HHhc--cceechhHhc-ccCCCCEEEEcCCCC
Confidence            44578999996 99999999999999999988888754431110  1000  0011112221 246799999998764

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=97.71  E-value=0.00024  Score=49.00  Aligned_cols=70  Identities=11%  Similarity=0.189  Sum_probs=48.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+|. |.+|+.+++.|...|.+|+++.+++...... ...  . + ..   ..+.++++.+|+|+.++|...
T Consensus       252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~~--G-~-~~---~~leell~~ADIVI~atGt~~  321 (476)
T PTZ00075        252 IAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQA-AME--G-Y-QV---VTLEDVVETADIFVTATGNKD  321 (476)
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-Hhc--C-c-ee---ccHHHHHhcCCEEEECCCccc
Confidence            45689999997 9999999999999999998888776433110 000  0 0 11   124556778999988877543

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.70  E-value=0.00021  Score=47.30  Aligned_cols=87  Identities=17%  Similarity=0.267  Sum_probs=58.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChhh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLLD   86 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~~   86 (104)
                      ..+++|+|+ |.+|...++.+...|.+|++++|++++.+...++.... ..+..+++.++..-+.+|+++.+++ ..  +
T Consensus       167 G~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~-~i~~~~~~~~~~~~~~~d~ii~tv~-~~--~  241 (339)
T COG1064         167 GKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADH-VINSSDSDALEAVKEIADAIIDTVG-PA--T  241 (339)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcE-EEEcCCchhhHHhHhhCcEEEECCC-hh--h
Confidence            468999998 79999999888889999999999998764333322111 1133344544444445999999999 32  3


Q ss_pred             HHHHHHHHHHhC
Q 046878           87 QLKIVDAIKVAG   98 (104)
Q Consensus        87 ~~~l~~~~~~~~   98 (104)
                      ....++.++..+
T Consensus       242 ~~~~l~~l~~~G  253 (339)
T COG1064         242 LEPSLKALRRGG  253 (339)
T ss_pred             HHHHHHHHhcCC
Confidence            345555555443

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=97.70  E-value=0.00017  Score=46.74  Aligned_cols=74  Identities=19%  Similarity=0.188  Sum_probs=48.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++|+|+| .|.+|..+++.|.+.|+.+.+++++....... .........++ ..+........+|+||.+.+...
T Consensus         3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~-~a~~lgv~d~~-~~~~~~~~~~~aD~VivavPi~~   76 (279)
T COG0287           3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLK-AALELGVIDEL-TVAGLAEAAAEADLVIVAVPIEA   76 (279)
T ss_pred             CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHH-HHhhcCccccc-ccchhhhhcccCCEEEEeccHHH
Confidence            46889989 59999999999999999988888876443111 11111100111 11222556678999999998754

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.70  E-value=0.00039  Score=40.62  Aligned_cols=38  Identities=16%  Similarity=0.252  Sum_probs=33.0

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .++.+++.|+|.+.-+|+.++..|.++|..|..+.++.
T Consensus        25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            35678999999999999999999999999988887554

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=97.70  E-value=0.00074  Score=45.43  Aligned_cols=71  Identities=10%  Similarity=0.253  Sum_probs=50.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~   80 (104)
                      +++|+|+|+ |..|..++..+.+.|+++.+++.++..... ...+. ....|..|.+.+.+.++  ++|.|+....
T Consensus        12 ~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-~~ad~-~~~~~~~d~~~l~~~~~~~~id~vi~~~e   84 (395)
T PRK09288         12 ATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAM-QVAHR-SHVIDMLDGDALRAVIEREKPDYIVPEIE   84 (395)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchH-Hhhhh-eEECCCCCHHHHHHHHHHhCCCEEEEeeC
Confidence            468999996 899999999999999999999887644311 11111 11225677888888776  7898876543

>PLN02948 phosphoribosylaminoimidazole carboxylase

Probab=97.69  E-value=0.00035  Score=49.45  Aligned_cols=71  Identities=17%  Similarity=0.262  Sum_probs=51.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      +.+++|+|+|+ |.+|+.++..+.+.|+++.+++.++...  ..+.-......++.|.+.+.+..+++|+|...
T Consensus        20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~ap--a~~~AD~~~v~~~~D~~~l~~~a~~~dvIt~e   90 (577)
T PLN02948         20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCP--ASSVAARHVVGSFDDRAAVREFAKRCDVLTVE   90 (577)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCc--hhhhCceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence            45679999997 9999999999999999999998765432  11111111123678888888888888987544

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=97.68  E-value=0.00015  Score=48.63  Aligned_cols=86  Identities=16%  Similarity=0.291  Sum_probs=60.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccc-ccccccccc-ccccChH-HHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRT-SKLEIHKEF-QELDEHE-KIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~~~~~~-~d~~~~~-~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++|++.|+ |++.+..+..|.++. .+|++.+|...+.+.. .... ...+ -|..+++ .+.+..+..|.++...++.
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~~~-~~av~ldv~~~~~~L~~~v~~~D~viSLlP~t   79 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKGIN-IKAVSLDVADEELALRKEVKPLDLVISLLPYT   79 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcCCC-ccceEEEccchHHHHHhhhcccceeeeeccch
Confidence            468999996 999999999999765 6899988876554221 1122 2212 2787777 8999999999999999986


Q ss_pred             ChhhHHHHHHHHHHh
Q 046878           83 QLLDQLKIVDAIKVA   97 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~   97 (104)
                      .   ...+++.|+..
T Consensus        80 ~---h~lVaK~~i~~   91 (445)
T KOG0172|consen   80 F---HPLVAKGCIIT   91 (445)
T ss_pred             h---hHHHHHHHHHh
Confidence            5   23444455443

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.68  E-value=0.00016  Score=47.56  Aligned_cols=73  Identities=19%  Similarity=0.238  Sum_probs=48.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----ccccc-cccccccccChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLE-IHKEFQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      .+||.|+|+ |.+|+.++..|...+.  ++.+++++.+....    ..... .... ..+.. +. .+.++++|+||.++
T Consensus         6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~-~~i~~-~~-~~~~~~adivIita   81 (315)
T PRK00066          6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSP-TKIYA-GD-YSDCKDADLVVITA   81 (315)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCC-eEEEe-CC-HHHhCCCCEEEEec
Confidence            369999998 9999999999998885  79999987654311    00000 0000 01111 12 34578999999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      |.+.
T Consensus        82 g~~~   85 (315)
T PRK00066         82 GAPQ   85 (315)
T ss_pred             CCCC
Confidence            9854

>PRK14851 hypothetical protein; Provisional

Probab=97.67  E-value=0.00075  Score=48.65  Aligned_cols=93  Identities=18%  Similarity=0.178  Sum_probs=58.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-------------ccc-------cc-c-----ccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-------------KLE-------IH-K-----EFQ   57 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-------------~~~-------~~-~-----~~~   57 (104)
                      +...+|+|+|+ |.+|..++..|...|. ++++++.+.-......             +.+       .+ +     .+.
T Consensus        41 L~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~~  119 (679)
T PRK14851         41 LAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPFP  119 (679)
T ss_pred             HhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEEe
Confidence            34578999997 9999999999999995 6777775421110000             000       00 0     001


Q ss_pred             cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      +..+.+++.+.++++|+||.+.-.........+.+.|.+.+
T Consensus       120 ~~i~~~n~~~~l~~~DvVid~~D~~~~~~r~~l~~~c~~~~  160 (679)
T PRK14851        120 AGINADNMDAFLDGVDVVLDGLDFFQFEIRRTLFNMAREKG  160 (679)
T ss_pred             cCCChHHHHHHHhCCCEEEECCCCCcHHHHHHHHHHHHHCC
Confidence            22345677788899999998886544444456667777665

>PLN02602 lactate dehydrogenase

Probab=97.67  E-value=0.00057  Score=45.63  Aligned_cols=73  Identities=10%  Similarity=0.095  Sum_probs=46.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----ccccc-cccccccccChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLE-IHKEFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      +||.|+|+ |.+|+.++..|+..+.  ++.+++.+.+....    ..... .... ..+....+ .+.++++|+||.++|
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~-~~i~~~~d-y~~~~daDiVVitAG  114 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPR-TKILASTD-YAVTAGSDLCIVTAG  114 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCC-CEEEeCCC-HHHhCCCCEEEECCC
Confidence            59999996 9999999999987773  68888887654311    00000 0000 11211111 234889999999999


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      .+.
T Consensus       115 ~~~  117 (350)
T PLN02602        115 ARQ  117 (350)
T ss_pred             CCC
Confidence            864

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=97.66  E-value=0.00018  Score=39.73  Aligned_cols=81  Identities=15%  Similarity=0.256  Sum_probs=51.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      ++.++++|+|+ |.+|..-++.|++.|.+|++++...+..  .....+..  ..+      .+.+.+.+.||.+.+... 
T Consensus         5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~~~~--~~~i~~~~--~~~------~~~l~~~~lV~~at~d~~-   72 (103)
T PF13241_consen    5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEIEFS--EGLIQLIR--REF------EEDLDGADLVFAATDDPE-   72 (103)
T ss_dssp             -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSEHHH--HTSCEEEE--SS-------GGGCTTESEEEE-SS-HH-
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCchhhh--hhHHHHHh--hhH------HHHHhhheEEEecCCCHH-
Confidence            46789999997 9999999999999999999998875111  11111111  122      233678898886666543 


Q ss_pred             hhHHHHHHHHHHhC
Q 046878           85 LDQLKIVDAIKVAG   98 (104)
Q Consensus        85 ~~~~~l~~~~~~~~   98 (104)
                       ....+.+.+++.+
T Consensus        73 -~n~~i~~~a~~~~   85 (103)
T PF13241_consen   73 -LNEAIYADARARG   85 (103)
T ss_dssp             -HHHHHHHHHHHTT
T ss_pred             -HHHHHHHHHhhCC
Confidence             3456666776554

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.66  E-value=0.00022  Score=46.73  Aligned_cols=73  Identities=19%  Similarity=0.212  Sum_probs=47.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc-cccccccccc---ccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR-TSKLEIHKEF---QELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~-~~~~~~~~~~---~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++|.|+|+ |.+|..++..|...|  .++.+++++...... .........+   ..+.. .. .+.++++|+||.+++.
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~-~d-~~~l~~aDiViita~~   77 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA-GD-YADCKGADVVVITAGA   77 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee-CC-HHHhCCCCEEEEccCC
Confidence            37999997 999999999999988  579999988654321 0000000000   00110 11 2347899999999997


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      +.
T Consensus        78 ~~   79 (308)
T cd05292          78 NQ   79 (308)
T ss_pred             CC
Confidence            54

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.66  E-value=0.00087  Score=44.84  Aligned_cols=91  Identities=12%  Similarity=0.079  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc--------------------cccc-ccc-----c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK--------------------LEIH-KEF-----Q   57 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~--------------------~~~~-~~~-----~   57 (104)
                      ++..+|+|+|+ |.+|.++++.|...|. ++.+++.+.-.......                    .... +..     .
T Consensus        26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~  104 (355)
T PRK05597         26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV  104 (355)
T ss_pred             HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence            34578999997 9999999999999995 78888776322110000                    0000 000     0


Q ss_pred             cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      ...+.++..+.++++|+|+.+....  .....+-++|.+.+
T Consensus       105 ~~i~~~~~~~~~~~~DvVvd~~d~~--~~r~~~n~~c~~~~  143 (355)
T PRK05597        105 RRLTWSNALDELRDADVILDGSDNF--DTRHLASWAAARLG  143 (355)
T ss_pred             eecCHHHHHHHHhCCCEEEECCCCH--HHHHHHHHHHHHcC
Confidence            1223455667788999999998753  22334456676665

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=97.65  E-value=0.00013  Score=48.48  Aligned_cols=75  Identities=9%  Similarity=0.178  Sum_probs=49.0

Q ss_pred             eEEEEccCChhhHHHHHHHHhCC--------CeEEEEEcCCC-----Cccc----ccccccccccc---cccChHHHHHh
Q 046878            9 KILIFGGTGYLGKYMVKASVSSG--------HNTFVYARPVT-----ENSR----TSKLEIHKEFQ---ELDEHEKIISI   68 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~--------~~v~~~~r~~~-----~~~~----~~~~~~~~~~~---d~~~~~~~~~~   68 (104)
                      +|.|+|+ |.+|.+++..|..++        ++|.++.|+..     ..+.    ..+....+.+.   ++.-..++.++
T Consensus         1 kI~VIGa-G~wGtALA~~la~ng~~~~~~~~~~V~lw~~~~~~~~~~~~~~in~~~~n~~ylpgi~Lp~~i~at~dl~ea   79 (342)
T TIGR03376         1 RVAVVGS-GNWGTAIAKIVAENARALPELFEESVRMWVFEEEIEGRNLTEIINTTHENVKYLPGIKLPANLVAVPDLVEA   79 (342)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCcccccCCceEEEEEeccccCCHHHHHHHHhcCCCccccCCCcCCCCeEEECCHHHH
Confidence            5889996 999999999999988        99999998431     1100    01111111111   22223456778


Q ss_pred             hccccEEEEcccCcCh
Q 046878           69 LKEVGVVISTVAYPQL   84 (104)
Q Consensus        69 ~~~~d~vv~~a~~~~~   84 (104)
                      ++++|+||.+.+...+
T Consensus        80 l~~ADiIIlAVPs~~i   95 (342)
T TIGR03376        80 AKGADILVFVIPHQFL   95 (342)
T ss_pred             HhcCCEEEEECChHHH
Confidence            8999999988886554

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PRK08328 hypothetical protein; Provisional

Probab=97.65  E-value=0.001  Score=41.99  Aligned_cols=90  Identities=21%  Similarity=0.246  Sum_probs=55.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc--------cc-------------cc-ccccc-----
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS--------KL-------------EI-HKEFQ-----   57 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~--------~~-------------~~-~~~~~-----   57 (104)
                      ...+|+|+|+ |.+|.++++.|...|. ++++++.+.-......        ..             .. .+.+.     
T Consensus        26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~  104 (231)
T PRK08328         26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV  104 (231)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence            4568999997 9999999999999995 6888876532211000        00             00 00000     


Q ss_pred             cccChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           58 ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        58 d~~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      ...+.+++.+.++++|+||.+....  .....+-+.|.+.+
T Consensus       105 ~~~~~~~~~~~l~~~D~Vid~~d~~--~~r~~l~~~~~~~~  143 (231)
T PRK08328        105 GRLSEENIDEVLKGVDVIVDCLDNF--ETRYLLDDYAHKKG  143 (231)
T ss_pred             ccCCHHHHHHHHhcCCEEEECCCCH--HHHHHHHHHHHHcC
Confidence            1123455667788999999998763  23334445666654

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=97.64  E-value=0.00022  Score=49.35  Aligned_cols=76  Identities=18%  Similarity=0.147  Sum_probs=49.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccccc-ccc--cccc---------ccChHHHHHhhccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLE-IHK--EFQE---------LDEHEKIISILKEV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~-~~~--~~~d---------~~~~~~~~~~~~~~   72 (104)
                      +|+|.|+|+ |++|..++..|.+.|  ++|++++.++++.+....-. ...  ...+         +.-..++.+.++++
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a   79 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA   79 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence            368999996 999999999999875  78999998876653211100 000  0001         11122345567889


Q ss_pred             cEEEEcccCcC
Q 046878           73 GVVISTVAYPQ   83 (104)
Q Consensus        73 d~vv~~a~~~~   83 (104)
                      |++|.|.+.+.
T Consensus        80 dvi~I~V~TP~   90 (473)
T PLN02353         80 DIVFVSVNTPT   90 (473)
T ss_pred             CEEEEEeCCCC
Confidence            99999998653

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=97.63  E-value=0.00025  Score=37.21  Aligned_cols=34  Identities=21%  Similarity=0.491  Sum_probs=30.8

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      +++|+|+ |++|-.++..|...|.+|+++.+++.-
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            5889997 999999999999999999999998743

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=97.63  E-value=0.00016  Score=47.08  Aligned_cols=32  Identities=25%  Similarity=0.285  Sum_probs=29.3

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +|.++|. |.+|..+++.|++.|+++.+.+|++
T Consensus         2 ~Ig~IGl-G~MG~~ma~~L~~~G~~v~v~~~~~   33 (292)
T PRK15059          2 KLGFIGL-GIMGTPMAINLARAGHQLHVTTIGP   33 (292)
T ss_pred             eEEEEcc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            6999995 9999999999999999999888875

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=97.63  E-value=0.00028  Score=39.96  Aligned_cols=73  Identities=23%  Similarity=0.250  Sum_probs=42.6

Q ss_pred             eEEEEccCChhhHHHHHHHHhC-CCeEEEE-EcCCCCccccc-cccccccc--ccccChHHHHHhhccccEEEEcccCcC
Q 046878            9 KILIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPVTENSRTS-KLEIHKEF--QELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~-~r~~~~~~~~~-~~~~~~~~--~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++.|+|++|.+|..+++.|... ++++..+ +++....+... ........  .++ +.+.+.  ..++|+||.+.+...
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~~~~   77 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLEL-EPEDFE--ELAVDIVFLALPHGV   77 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCccccccccccc-ccCChh--hcCCCEEEEcCCcHH
Confidence            5889999999999999999985 6777766 43322221111 11111100  112 112222  257899999999865


Q ss_pred             h
Q 046878           84 L   84 (104)
Q Consensus        84 ~   84 (104)
                      .
T Consensus        78 ~   78 (122)
T smart00859       78 S   78 (122)
T ss_pred             H
Confidence            3

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]

Probab=97.62  E-value=0.00045  Score=47.42  Aligned_cols=87  Identities=18%  Similarity=0.208  Sum_probs=55.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc-cccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE-IHKEFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      .+++|+|+|- |..|.++++.|.+.|++|++.+.++... ...... ....+. +...........++|+||-+.|.+..
T Consensus         6 ~~~kv~V~GL-G~sG~a~a~~L~~~G~~v~v~D~~~~~~-~~~~~~~~~~~i~-~~~g~~~~~~~~~~d~vV~SPGi~~~   82 (448)
T COG0771           6 QGKKVLVLGL-GKSGLAAARFLLKLGAEVTVSDDRPAPE-GLAAQPLLLEGIE-VELGSHDDEDLAEFDLVVKSPGIPPT   82 (448)
T ss_pred             cCCEEEEEec-ccccHHHHHHHHHCCCeEEEEcCCCCcc-chhhhhhhccCce-eecCccchhccccCCEEEECCCCCCC
Confidence            3689999995 9999999999999999999999776542 111111 011111 11111111445689999999998752


Q ss_pred             hhHHHHHHHHHHhC
Q 046878           85 LDQLKIVDAIKVAG   98 (104)
Q Consensus        85 ~~~~~l~~~~~~~~   98 (104)
                         .++++.+...+
T Consensus        83 ---~p~v~~A~~~g   93 (448)
T COG0771          83 ---HPLVEAAKAAG   93 (448)
T ss_pred             ---CHHHHHHHHcC
Confidence               34555665554

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.62  E-value=0.00054  Score=47.38  Aligned_cols=74  Identities=14%  Similarity=0.290  Sum_probs=49.6

Q ss_pred             CCCCeEEEEc----------------cCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh
Q 046878            5 NTKPKILIFG----------------GTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI   68 (104)
Q Consensus         5 ~~~~~i~i~G----------------a~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~   68 (104)
                      ++.++|+||+                +||.+|.+|++.+..+|.+|+++.-.. ....+......    .+...+++.++
T Consensus       254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~-~~~~p~~v~~i----~V~ta~eM~~a  328 (475)
T PRK13982        254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV-DLADPQGVKVI----HVESARQMLAA  328 (475)
T ss_pred             cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc-CCCCCCCceEE----EecCHHHHHHH
Confidence            5667888885                468999999999999999999887332 22122222211    34455555554


Q ss_pred             hc---cccEEEEcccCcC
Q 046878           69 LK---EVGVVISTVAYPQ   83 (104)
Q Consensus        69 ~~---~~d~vv~~a~~~~   83 (104)
                      +.   +.|++|++|+..+
T Consensus       329 v~~~~~~Di~I~aAAVaD  346 (475)
T PRK13982        329 VEAALPADIAIFAAAVAD  346 (475)
T ss_pred             HHhhCCCCEEEEeccccc
Confidence            42   3799999999866

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.62  E-value=0.00015  Score=46.99  Aligned_cols=76  Identities=12%  Similarity=0.089  Sum_probs=47.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccc-cccc-cccccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLE-IHKE-FQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~-~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +.++++|+|+ |..|++++..|...|. +++++.|+.++.+... ... .... .....+...+...+..+|+|||+.+.
T Consensus       126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~~~divINaTp~  204 (283)
T PRK14027        126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPM  204 (283)
T ss_pred             CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecCHhHHHHHHhhcCEEEEcCCC
Confidence            3468999997 9999999999999885 7889999865542211 000 0000 00111222233345678999999875


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus       205 G  205 (283)
T PRK14027        205 G  205 (283)
T ss_pred             C
Confidence            3

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.61  E-value=0.0002  Score=46.15  Aligned_cols=70  Identities=11%  Similarity=0.113  Sum_probs=45.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC----eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH----NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~----~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++|.++|+ |.+|.++++.|.+.|+    ++++.+|++++.+....  ... ..-..+   ..+.+.++|+||-+..+..
T Consensus         3 ~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~--~~g-~~~~~~---~~e~~~~aDiIiLavkP~~   75 (272)
T PRK12491          3 KQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASD--KYG-ITITTN---NNEVANSADILILSIKPDL   75 (272)
T ss_pred             CeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHH--hcC-cEEeCC---cHHHHhhCCEEEEEeChHH
Confidence            47999996 9999999999998774    58887776644321111  011 111112   2344668899998888754


Q ss_pred             h
Q 046878           84 L   84 (104)
Q Consensus        84 ~   84 (104)
                      +
T Consensus        76 ~   76 (272)
T PRK12491         76 Y   76 (272)
T ss_pred             H
Confidence            3

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	104
2qw8_A	314	Structure Of Eugenol Synthase From Ocimum Basilicum		9e-27
2r2g_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		1e-26
2qx7_A	318	Structure Of Eugenol Synthase From Ocimum Basilicum		1e-26
3c1o_A	321	The Multiple Phenylpropene Synthases In Both Clarki		2e-26
3c3x_A	318	The Multiple Phenylpropene Synthases In Both Clarki		8e-26
1qyd_A	313	Crystal Structures Of Pinoresinol-Lariciresinol And		2e-16
1qyc_A	308	Crystal Structures Of Pinoresinol-Lariciresinol And		4e-14
2gas_A	307	Crystal Structure Of Isoflavone Reductase Length =		2e-11
3i52_A	346	Ternary Complex Structure Of Leucoanthocyanidin Red		1e-10

>pdb|2QW8|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 314

Iteration: 1
 Score =  115 bits (287), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 14/113 (12%)
Query: 1   MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--- 57
           ME    K KILIFGGTGY+G +MVK S+  GH T+V+ RP      +SK  +  EFQ   
Sbjct: 1   MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP-----NSSKTTLLDEFQSLG 55
Query: 58  ------ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
                 ELDEHEK++ ++K+V VVIS +A+PQ+LDQ KI++AIKVAGNIK F+
Sbjct: 56  AIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFL 108

>pdb|2R2G|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Complexed With Emdf Length = 318

Iteration: 1
 Score =  114 bits (286), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 14/113 (12%)
Query: 1   MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--- 57
           ME    K KILIFGGTGY+G +MVK S+  GH T+V+ RP      +SK  +  EFQ   
Sbjct: 5   MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP-----NSSKTTLLDEFQSLG 59
Query: 58  ------ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
                 ELDEHEK++ ++K+V VVIS +A+PQ+LDQ KI++AIKVAGNIK F+
Sbjct: 60  AIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFL 112

>pdb|2QX7|A Chain A, Structure Of Eugenol Synthase From Ocimum Basilicum Length = 318

Iteration: 1
 Score =  114 bits (286), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 60/113 (53%), Positives = 78/113 (69%), Gaps = 14/113 (12%)
Query: 1   MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--- 57
           ME    K KILIFGGTGY+G +MVK S+  GH T+V+ RP      +SK  +  EFQ   
Sbjct: 5   MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP-----NSSKTTLLDEFQSLG 59
Query: 58  ------ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
                 ELDEHEK++ ++K+V VVIS +A+PQ+LDQ KI++AIKVAGNIK F+
Sbjct: 60  AIIVKGELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFL 112

>pdb|3C1O|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 321

Iteration: 1
 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 51/105 (48%), Positives = 79/105 (75%), Gaps = 9/105 (8%)
Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ---------EL 59
           KI+I+GGTGY+GK+MV+AS+S  H TF+YARP+T +S  S +++ +EF+         E+
Sbjct: 6   KIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEM 65
Query: 60  DEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
           +EHEK++S+LK+V +VIS + +P +  Q+ I++AIK AGNIK F+
Sbjct: 66  EEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFL 110

>pdb|3C3X|A Chain A, The Multiple Phenylpropene Synthases In Both Clarkia Breweri And Petunia Hybrida Represent Two Distinct Lineages Length = 318

Iteration: 1
 Score =  111 bits (278), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 60/113 (53%), Positives = 76/113 (67%), Gaps = 14/113 (12%)
Query: 1   MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ--- 57
           ME    K KILIFGGTGY+G +MVK S+  GH T+V+ RP      +SK  +  EFQ   
Sbjct: 5   MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP-----NSSKTTLLDEFQSLG 59
Query: 58  ------ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
                 ELDEHEK++ ++K+V VVIS +A PQ LDQ KI++AIKVAGNIK F+
Sbjct: 60  AIIVKGELDEHEKLVELMKKVDVVISALAVPQYLDQFKILEAIKVAGNIKRFL 112

>pdb|1QYD|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 313

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/112 (42%), Positives = 70/112 (62%), Gaps = 12/112 (10%)
Query: 5   NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP--VTENSRTSKLEIHKEF------ 56
           + K ++LI GGTGY+GK +V AS+S GH T+V  RP  V+   +   L   K+       
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61
Query: 57  QELDEHEKIISILKEVGVVISTVA----YPQLLDQLKIVDAIKVAGNIKVFV 104
             LD+H++++  LK+V VVIS +A       +L+QLK+V+AIK AGNIK F+
Sbjct: 62  ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113

>pdb|1QYC|A Chain A, Crystal Structures Of Pinoresinol-Lariciresinol And Phenylcoumaran Benzylic Ether Reductases, And Their Relationship To Isoflavone Reductases Length = 308

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 6   TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ-------- 57
           ++ +IL+ G TGY+G+++ KAS+  GH TF+  R  T +S + K ++ + F+        
Sbjct: 3   SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 62
Query: 58  -ELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
             +D+H  ++  +K V VVISTV   Q+  Q+ I+ AIK  G +K F
Sbjct: 63  GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRF 109

>pdb|2GAS|A Chain A, Crystal Structure Of Isoflavone Reductase Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 10/108 (9%)
Query: 6   TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRTSKLEIHKEFQEL----- 59
           T+ KILI G TG +G+++V AS+ +G+ T+   R  +T  +  +K E+   +Q L     
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60
Query: 60  ----DEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVF 103
               ++HE ++  +K+V +VI       + DQ+KI+ AIK AGN+K F
Sbjct: 61  EGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKF 108

>pdb|3I52|A Chain A, Ternary Complex Structure Of Leucoanthocyanidin Reductase From Vitis Vinifera Length = 346

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 64/111 (57%), Gaps = 13/111 (11%)
Query: 5   NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE------ 58
           + K ++LI G TG++G+++  AS+ +   T++ ARP   +   SK +I K  ++      
Sbjct: 8   SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSP--SKAKIFKALEDKGAIIV 65
Query: 59  ---LDEHEKIISILK--EVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
              ++E E +  ILK  E+ +V+STV    +LDQ+ +V A+K  G IK F+
Sbjct: 66  YGLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFL 116

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	104
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	9e-28
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	4e-27
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	3e-26
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-24
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	1e-22
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	2e-22
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-06
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	1e-05
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	2e-05
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	3e-05
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	6e-05
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	6e-05
1xq6_A	253	Unknown protein; structural genomics, protein stru	2e-04
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-04
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-04
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	5e-04
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	6e-04

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score =  101 bits (254), Expect = 9e-28
 Identities = 50/108 (46%), Positives = 78/108 (72%), Gaps = 9/108 (8%)

Query: 6   TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE------- 58
              KI+I+GGTGY+GK+MV+AS+S  H TF+YARP+T +S  S +++ +EF+        
Sbjct: 3   HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIE 62

Query: 59  --LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
             ++EHEK++S+LK+V +VIS + +P +  Q+ I++AIK AGNIK F+
Sbjct: 63  GEMEEHEKMVSVLKQVDIVISALPFPMISSQIHIINAIKAAGNIKRFL 110

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score =  100 bits (250), Expect = 4e-27
 Identities = 56/108 (51%), Positives = 74/108 (68%), Gaps = 4/108 (3%)

Query: 1   MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----SKLEIHKEF 56
           ME    K KILIFGGTGY+G +MVK S+  GH T+V+ RP +  +        L      
Sbjct: 5   MEENGMKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVK 64

Query: 57  QELDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
            ELDEHEK++ ++K+V VVIS +A+PQ+LDQ KI++AIKVAGNIK F+
Sbjct: 65  GELDEHEKLVELMKKVDVVISALAFPQILDQFKILEAIKVAGNIKRFL 112

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 97.7 bits (243), Expect = 3e-26
 Identities = 38/108 (35%), Positives = 63/108 (58%), Gaps = 9/108 (8%)

Query: 6   TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE------- 58
           ++ +IL+ G TGY+G+++ KAS+  GH TF+  R  T +S + K ++ + F+        
Sbjct: 3   SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 62

Query: 59  --LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
             +D+H  ++  +K V VVISTV   Q+  Q+ I+ AIK  G +K F 
Sbjct: 63  GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVKRFF 110

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 93.0 bits (231), Expect = 2e-24
 Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 10/109 (9%)

Query: 6   TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQE------ 58
           T+ KILI G TG +G+++V AS+ +G+ T+   R     +   +K E+   +Q       
Sbjct: 1   TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILL 60

Query: 59  ---LDEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
              +++HE ++  +K+V +VI       + DQ+KI+ AIK AGN+K F 
Sbjct: 61  EGDINDHETLVKAIKQVDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 88.1 bits (218), Expect = 1e-22
 Identities = 48/113 (42%), Positives = 72/113 (63%), Gaps = 14/113 (12%)

Query: 5   NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE------ 58
           + K ++LI GGTGY+GK +V AS+S GH T+V  RP    S   K+++   F++      
Sbjct: 2   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEV-VSNIDKVQMLLYFKQLGAKLI 60

Query: 59  ---LDEHEKIISILKEVGVVISTVA----YPQLLDQLKIVDAIKVAGNIKVFV 104
              LD+H++++  LK+V VVIS +A       +L+QLK+V+AIK AGNIK F+
Sbjct: 61  EASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 88.2 bits (218), Expect = 2e-22
 Identities = 37/110 (33%), Positives = 61/110 (55%), Gaps = 13/110 (11%)

Query: 6   TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE------- 58
            K ++LI G TG++G+++  AS+ +   T++ ARP       SK +I K  ++       
Sbjct: 9   PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGP--RSPSKAKIFKALEDKGAIIVY 66

Query: 59  --LDEHEKIISILKEVGV--VISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
             ++E E +  ILKE  +  V+STV    +LDQ+ +V A+K  G IK F+
Sbjct: 67  GLINEQEAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFL 116

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 15/105 (14%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK---EFQELDEHEKI 65
           KI I G TG  G  +++ + + GH      R         K+          + D  +  
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVR------NAGKITQTHKDINILQKDIFDLT 55

Query: 66  ISILKEVGVVISTVA-----YPQLLDQLK-IVDAIKVAGNIKVFV 104
           +S L +  VV+           + +  L  ++  +    + ++ V
Sbjct: 56  LSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLV 100

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 40.8 bits (96), Expect = 1e-05
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 13/107 (12%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
           ++L+ G  G + +Y++    + GH      R   E     +     +    +  E     
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVRN-EEQGPELRERGASDIVVANLEEDFSHA 81

Query: 69  LKEVGVVISTV--------AYPQLLD---QLKIVDAIKVAGNIKVFV 104
              +  V+               L+D    +K +   +  G IK F+
Sbjct: 82  FASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFI 127

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 40.0 bits (94), Expect = 2e-05
 Identities = 23/110 (20%), Positives = 37/110 (33%), Gaps = 21/110 (19%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQ------ELDEH 62
           KI IFG TG  G   +  +V +G+   V  R       +S+L             ++ + 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR------DSSRLPSEGPRPAHVVVGDVLQA 58

Query: 63  EKIISILKEVGVVISTVAYPQLLDQLK--------IVDAIKVAGNIKVFV 104
             +   +     VI  +     L            IV A+K  G +   V
Sbjct: 59  ADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHG-VDKVV 107

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 22/110 (20%), Positives = 46/110 (41%), Gaps = 20/110 (18%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQE-----LDEHE 63
           KI++ G +G++G  ++  +++ G       R         K++I  E  +     +   +
Sbjct: 6   KIVLIGASGFVGSALLNEALNRGFEVTAVVR------HPEKIKIENEHLKVKKADVSSLD 59

Query: 64  KIISILKEVGVVISTVAY----PQLLDQ-----LKIVDAIKVAGNIKVFV 104
           ++  + K    VIS        P + D+     L I+D +K AG  +  +
Sbjct: 60  EVCEVCKGADAVISAFNPGWNNPDIYDETIKVYLTIIDGVKKAGVNRFLM 109

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 39.2 bits (92), Expect = 6e-05
 Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 9/103 (8%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
           KI I G TG +GK ++K+  ++ +  +  AR V +  + + ++      +    E++   
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTP-EEMAKQ 60

Query: 69  LKEVGVVISTV----AYPQLLD---QLKIVDAIKVAGNIKVFV 104
           L  +  +I+           +D    +K++ A + A  +K F+
Sbjct: 61  LHGMDAIINVSGSGGKSLLKVDLYGAVKLMQAAEKAE-VKRFI 102

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 39.0 bits (91), Expect = 6e-05
 Identities = 13/98 (13%), Positives = 36/98 (36%), Gaps = 3/98 (3%)

Query: 9   KILIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIIS 67
            +LI G  G + ++++            ++AR   +  +           ++  H  +  
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQ 84

Query: 68  ILKEVGVVISTVAYPQLLDQLK-IVDAIKVAGNIKVFV 104
            ++   +V + +    L  Q   ++ A+K    +K  +
Sbjct: 85  AMQGQDIVYANLTGEDLDIQANSVIAAMKACD-VKRLI 121

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 37.9 bits (88), Expect = 2e-04
 Identities = 10/78 (12%), Positives = 24/78 (30%), Gaps = 3/78 (3%)

Query: 5  NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELD--EH 62
             P +L+ G +G  G+ + K               V       K+    +    D  + 
Sbjct: 2  ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGL-VRSAQGKEKIGGEADVFIGDITDA 60

Query: 63 EKIISILKEVGVVISTVA 80
          + I    + +  ++   +
Sbjct: 61 DSINPAFQGIDALVILTS 78

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 11/76 (14%), Positives = 27/76 (35%), Gaps = 4/76 (5%)

Query: 4  ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE 63
           +T  ++L+ G TG  G++++   +S      V A      +   +L+           E
Sbjct: 2  HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVG----PLAE 57

Query: 64 KIISILKEVGVVISTV 79
           +  +   +      +
Sbjct: 58 LLPQLDGSIDTAFCCL 73

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 36.9 bits (85), Expect = 3e-04
 Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 10/104 (9%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
           KI + G TG  G  +V  +   GH      R         +L         +      + 
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVR--DPQKAADRLGATVATLVKEPLVLTEAD 59

Query: 69  LKEVGVVISTVAYPQLLDQL--------KIVDAIKVAGNIKVFV 104
           L  V  V+  ++ P    +          +V  ++ +  + VF+
Sbjct: 60  LDSVDAVVDALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE 51
          K  + G TG LG +  +A  ++GH+  +  RP   +S+  +L 
Sbjct: 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRP---SSQIQRLA 54

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 36.2 bits (84), Expect = 6e-04
 Identities = 12/112 (10%), Positives = 32/112 (28%), Gaps = 26/112 (23%)

Query: 9   KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
            + I G  G +G+ +     + GH      R         + +  K F   D       +
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVR--------KEPKPGKRF--WDPLNPASDL 198

Query: 69  LKEVGVVIS----------TVAYPQLLDQ------LKIVDAIKVAGNIKVFV 104
           L    V++             ++ + + +        + + +  +      +
Sbjct: 199 LDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMI 250

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	104
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.78
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.77
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.77
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.77
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.76
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.76
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.75
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.75
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.75
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.75
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.74
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.74
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.74
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.74
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.73
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.72
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.72
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.72
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.71
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.71
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.71
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.71
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.7
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.7
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.69
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.69
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.69
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.69
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.69
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.69
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.68
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.68
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.68
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.68
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.67
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.67
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.67
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.67
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.67
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.67
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.66
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.66
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.65
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.65
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.65
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.65
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.65
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.64
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.64
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.64
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.63
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.63
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.63
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.63
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.63
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.63
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.62
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.62
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.62
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.62
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.61
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.61
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.61
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.6
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.59
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.59
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.59
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.59
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.59
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.59
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.59
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.59
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.58
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.58
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.58
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.57
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.57
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.57
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.56
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.56
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.55
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.55
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.54
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.54
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.54
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.54
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.54
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.53
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.53
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.52
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.52
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.52
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.52
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.52
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.51
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.51
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.51
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.48
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.48
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.48
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.48
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.47
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.47
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.46
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.46
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.46
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.45
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.45
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.44
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.44
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.44
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.44
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.44
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.44
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.43
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.43
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.43
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.43
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.42
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.42
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.42
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.42
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.42
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.42
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.42
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.42
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.41
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.41
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.41
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.41
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.41
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.4
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.4
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.4
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.4
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.4
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.4
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.4
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.4
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.39
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.39
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.39
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.39
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.39
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.39
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.39
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.39
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.38
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.38
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.38
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.38
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.38
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.38
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.38
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.38
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.38
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.38
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.38
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.38
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.37
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.37
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.37
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.37
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.37
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.37
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.37
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.37
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.36
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.36
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.36
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.36
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.36
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.36
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.36
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.35
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.35
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.35
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.35
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.35
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.35
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.35
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.35
1spx_A	278	Short-chain reductase family member (5L265); paral	99.35
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.35
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.35
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.35
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.35
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.35
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.35
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.35
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.35
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.34
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.34
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.34
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.34
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.34
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.33
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.33
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.33
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.33
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.33
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.33
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.33
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.32
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.32
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.32
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.32
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.32
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.32
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	99.32
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.32
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.32
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.32
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.32
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.32
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.31
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.31
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.31
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.31
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.31
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.31
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.31
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.31
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.31
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.31
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.31
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.3
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.3
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.3
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.3
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.3
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.3
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.29
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.29
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.29
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.29
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.29
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.29
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.29
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.29
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.29
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.29
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.28
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.28
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.28
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.28
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.27
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.27
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.27
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.27
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.27
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.27
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.26
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.26
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.26
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.26
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.26
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.26
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.26
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.26
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.25
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.25
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.25
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.25
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.25
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.24
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.24
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.24
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.24
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.23
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.23
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	99.23
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	99.22
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.22
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.21
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.21
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.21
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.21
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.21
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.2
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.19
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.19
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.18
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.18
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.18
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.18
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.17
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	99.16
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.16
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.16
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.15
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.15
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.14
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.14
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.13
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	99.13
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.12
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.12
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.1
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.1
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.09
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.09
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.09
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	99.09
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	99.08
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.05
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.04
1id1_A	153	Putative potassium channel protein; RCK domain, E.	99.02
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	99.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	98.96
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.94
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.93
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.92
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	98.92
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.9
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.9
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.9
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	98.89
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	98.87
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	98.79
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.79
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.75
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	98.74
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.73
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	98.69
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.69
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	98.68
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	98.67
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	98.67
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	98.63
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.63
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.63
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.63
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	98.61
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	98.59
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	98.59
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.58
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	98.58
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	98.57
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	98.57
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	98.57
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	98.55
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.54
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	98.54
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	98.54
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	98.52
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	98.51
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	98.51
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	98.5
3pp8_A	315	Glyoxylate/hydroxypyruvate reductase A; structural	98.5
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	98.5
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	98.49
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	98.47
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.46
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.46
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	98.45
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	98.45
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.44
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	98.43
3hg7_A	324	D-isomer specific 2-hydroxyacid dehydrogenase FAM	98.43
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	98.43
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.43
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	98.42
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	98.41
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.41
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	98.41
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	98.41
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	98.4
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	98.39
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	98.39
4g65_A	461	TRK system potassium uptake protein TRKA; structur	98.38
3qha_A	296	Putative oxidoreductase; seattle structural genomi	98.38
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	98.38
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	98.37
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	98.37
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	98.37
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.36
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	98.36
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	98.36
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	98.36
1t4b_A	367	Aspartate-semialdehyde dehydrogenase; asadh, HOSR,	98.34
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	98.34
3uw3_A	377	Aspartate-semialdehyde dehydrogenase; structural g	98.33
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	98.33
3pzr_A	370	Aspartate-semialdehyde dehydrogenase; NADP, oxidor	98.33
3hsk_A	381	Aspartate-semialdehyde dehydrogenase; candida albi	98.32
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.32
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	98.32
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.32
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.32
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	98.32
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	98.31
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.31
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	98.3
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	98.3
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	98.3
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.3
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	98.29
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	98.28
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	98.28
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	98.28
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	98.28
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	98.27
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.27
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	98.27
1lnq_A	336	MTHK channels, potassium channel related protein;	98.26
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	98.26
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	98.25
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.25
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	98.24
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	98.24
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	98.24
3o9z_A	312	Lipopolysaccaride biosynthesis protein WBPB; oxido	98.23
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	98.23
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	98.23
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.23
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	98.22
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	98.21
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	98.21
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	98.21
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	98.21
2cuk_A	311	Glycerate dehydrogenase/glyoxylate reductase; stru	98.21
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	98.2
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	98.2
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	98.2
2duw_A	145	Putative COA-binding protein; ligand binding prote	98.2
4ezb_A	317	Uncharacterized conserved protein; structural geno	98.19
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	98.19
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	98.19
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	98.19
3ba1_A	333	HPPR, hydroxyphenylpyruvate reductase; two domain	98.19
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	98.19
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.19
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	98.19
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.18
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.18
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	98.18
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.18
2yq5_A	343	D-isomer specific 2-hydroxyacid dehydrogenase; oxi	98.17
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	98.17
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	98.16
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	98.16
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	98.16
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	98.16
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.16
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	98.15
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	98.15
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	98.15
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.15
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	98.15
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.15
3oa2_A	318	WBPB; oxidoreductase, sugar biosynthesis, dehydrog	98.15
4gx0_A	565	TRKA domain protein; membrane protein, ION channel	98.14
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	98.14
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	98.14
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	98.14
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	98.13
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	98.12
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.12
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	98.12
1xdw_A	331	NAD+-dependent (R)-2-hydroxyglutarate dehydrogenas	98.12
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.11
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	98.11
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	98.11
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	98.11
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.1
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	98.1
4fgw_A	391	Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxi	98.1
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	98.1
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	98.09
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.09
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	98.09
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.09
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	98.09
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	98.08
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	98.07
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	98.07
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	98.07
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	98.07
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	98.06
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	98.06
2pi1_A	334	D-lactate dehydrogenase; oxidoreductase, D-LDH, NA	98.06
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.06
1qp8_A	303	Formate dehydrogenase; oxidoreductase; HET: NDP; 2	98.06
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.05
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	98.05
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.05
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	98.05
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	98.04
3uuw_A	308	Putative oxidoreductase with NAD(P)-binding rossm	98.03
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	98.03
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	98.03
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	98.02
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	98.02
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	98.0
3k5p_A	416	D-3-phosphoglycerate dehydrogenase; niaid, ssgcid,	97.99
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.99
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	97.99
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.97
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.97

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.78  E-value=8.5e-19  Score=107.56  Aligned_cols=95  Identities=21%  Similarity=0.350  Sum_probs=76.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccc-cccccChHHHHHhhccccEEEEcccCcC--
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKE-FQELDEHEKIISILKEVGVVISTVAYPQ--   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~~--   83 (104)
                      +++|+|+||+|++|+++++.|+++|++|++++|++.+.....  ..... ..|+.|++++.++++++|+|||++|...  
T Consensus         4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~   81 (227)
T 3dhn_A            4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN   81 (227)
T ss_dssp             CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC----
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCC
Confidence            468999999999999999999999999999999876542211  11111 1389999999999999999999999862  


Q ss_pred             -------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                             ...+.++++++.+.+ ++|||
T Consensus        82 ~~~~~~n~~~~~~l~~~~~~~~-~~~~v  108 (227)
T 3dhn_A           82 PDIYDETIKVYLTIIDGVKKAG-VNRFL  108 (227)
T ss_dssp             --CCSHHHHHHHHHHHHHHHTT-CSEEE
T ss_pred             hhHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence                   567889999999887 77764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.77  E-value=1.4e-18  Score=112.51  Aligned_cols=100  Identities=34%  Similarity=0.596  Sum_probs=78.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-cccc---c--ccccc-cccccChHHHHHhhc--cccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-RTSK---L--EIHKE-FQELDEHEKIISILK--EVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-~~~~---~--~~~~~-~~d~~~~~~~~~~~~--~~d~v   75 (104)
                      |++++|+|+||+|++|+++++.|++.|++|++++|++.... ....   .  ..... ..|+.|.+++.++++  ++|+|
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~V   87 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIV   87 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEE
Confidence            55679999999999999999999999999999999873321 0000   0  01111 138999999999999  99999


Q ss_pred             EEcccCcChhhHHHHHHHHHHhCCcccCC
Q 046878           76 ISTVAYPQLLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        76 v~~a~~~~~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ||+++......+.++++++.+.+++++||
T Consensus        88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v  116 (346)
T 3i6i_A           88 VSTVGGESILDQIALVKAMKAVGTIKRFL  116 (346)
T ss_dssp             EECCCGGGGGGHHHHHHHHHHHCCCSEEE
T ss_pred             EECCchhhHHHHHHHHHHHHHcCCceEEe
Confidence            99999988889999999999886578764

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.77  E-value=3e-18  Score=104.85  Aligned_cols=94  Identities=23%  Similarity=0.355  Sum_probs=76.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccC-hHHHHHhhccccEEEEcccCcC---
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDE-HEKIISILKEVGVVISTVAYPQ---   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~vv~~a~~~~---   83 (104)
                      |+|+|+||+|++|+++++.|+++|++|++++|++............  ..|+.| ++++.++++++|+|||++|...   
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~--~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~   78 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAV--HFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL   78 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEE--ECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhcCCceEE--EecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence            3799999999999999999999999999999997655222111111  138999 9999999999999999999763   


Q ss_pred             ----hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ----LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ----~~~~~~l~~~~~~~~~v~~~i  104 (104)
                          +..+.++++++.+.+ +++||
T Consensus        79 ~~~n~~~~~~l~~a~~~~~-~~~iv  102 (219)
T 3dqp_A           79 LKVDLYGAVKLMQAAEKAE-VKRFI  102 (219)
T ss_dssp             CCCCCHHHHHHHHHHHHTT-CCEEE
T ss_pred             EeEeHHHHHHHHHHHHHhC-CCEEE
Confidence                567889999999886 77764

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.77  E-value=7.9e-18  Score=101.58  Aligned_cols=97  Identities=22%  Similarity=0.238  Sum_probs=75.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC---
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ---   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~---   83 (104)
                      .++++|+||+|++|+++++.|+++|++|++++|++................|+.|++++.++++++|+|||+++...   
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   82 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS   82 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence            36899999999999999999999999999999987654221111111112389999999999999999999999754   


Q ss_pred             -----hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -----LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -----~~~~~~l~~~~~~~~~v~~~i  104 (104)
                           ...+.++++++.+.+ +++||
T Consensus        83 ~~~~n~~~~~~~~~~~~~~~-~~~~v  107 (206)
T 1hdo_A           83 PTTVMSEGARNIVAAMKAHG-VDKVV  107 (206)
T ss_dssp             CCCHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             ccchHHHHHHHHHHHHHHhC-CCeEE
Confidence                 346789999998886 77764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.76  E-value=4.8e-18  Score=108.82  Aligned_cols=97  Identities=54%  Similarity=0.843  Sum_probs=76.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccccc--ccccc-ccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRTSK--LEIHK-EFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~~~--~~~~~-~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++|+|+||+|++|+++++.|+++|++|++++|++... .....  ..... ...|+.|++++.++++++|+|||+++...
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~   91 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ   91 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence            5899999999999999999999999999999987522 10000  01111 12389999999999999999999999876


Q ss_pred             hhhHHHHHHHHHHhCCcccCC
Q 046878           84 LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ...+.++++++.+.+++++||
T Consensus        92 ~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           92 ILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             STTHHHHHHHHHHHCCCCEEE
T ss_pred             hHHHHHHHHHHHhcCCCCEEE
Confidence            778899999999885477764

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.76  E-value=4.5e-18  Score=105.26  Aligned_cols=99  Identities=12%  Similarity=0.258  Sum_probs=76.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      |++++++||||+|++|+++++.|+++| ++|++++|++++..............|+.|++++.++++++|+|||+++...
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~  100 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGED  100 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTT
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCc
Confidence            456789999999999999999999999 8999999987655221111111112389999999999999999999999866


Q ss_pred             h-hhHHHHHHHHHHhCCcccCC
Q 046878           84 L-LDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ~-~~~~~l~~~~~~~~~v~~~i  104 (104)
                      . ..+.++++++++.+ +++||
T Consensus       101 ~~~~~~~~~~~~~~~~-~~~iV  121 (236)
T 3qvo_A          101 LDIQANSVIAAMKACD-VKRLI  121 (236)
T ss_dssp             HHHHHHHHHHHHHHTT-CCEEE
T ss_pred             hhHHHHHHHHHHHHcC-CCEEE
Confidence            3 34678889998887 77764

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.75  E-value=1.3e-17  Score=105.47  Aligned_cols=96  Identities=16%  Similarity=0.230  Sum_probs=76.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC---
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ---   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~---   83 (104)
                      |+|+||||+|++|+++++.|.+. |++|++++|++.+..............|+.|++++.++++++|+|||+++...   
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~   80 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF   80 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence            47999999999999999999987 89999999987654221111111112399999999999999999999999754   


Q ss_pred             --hhhHHHHHHHHHHhCCcccCC
Q 046878           84 --LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 --~~~~~~l~~~~~~~~~v~~~i  104 (104)
                        ...+.++++++.+.+ ++|||
T Consensus        81 ~~~~~~~~l~~aa~~~g-v~~iv  102 (289)
T 3e48_A           81 KRIPEVENLVYAAKQSG-VAHII  102 (289)
T ss_dssp             HHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             hhHHHHHHHHHHHHHcC-CCEEE
Confidence              456789999999887 88864

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.75  E-value=7.2e-18  Score=103.25  Aligned_cols=96  Identities=13%  Similarity=0.154  Sum_probs=75.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHH-hCCCeEEEEEcCCC-Ccccc--cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASV-SSGHNTFVYARPVT-ENSRT--SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~-~~~~~v~~~~r~~~-~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++++|+||+|++|+++++.|+ +.|++|++++|+++ +.+..  ..........|+.|++++.++++++|+|||++|..
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            3569999999999999999999 89999999999876 44211  11111111138999999999999999999999987


Q ss_pred             ChhhHHHHHHHHHHhCCcccCC
Q 046878           83 QLLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .+. +.++++++++.+ ++|||
T Consensus        85 n~~-~~~~~~~~~~~~-~~~iv  104 (221)
T 3r6d_A           85 GSD-MASIVKALSRXN-IRRVI  104 (221)
T ss_dssp             HHH-HHHHHHHHHHTT-CCEEE
T ss_pred             Chh-HHHHHHHHHhcC-CCeEE
Confidence            666 889999998886 77764

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.75  E-value=6.9e-18  Score=107.46  Aligned_cols=98  Identities=38%  Similarity=0.605  Sum_probs=77.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc--------cccccc-cccccChHHHHHhhccccEEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK--------LEIHKE-FQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~--------~~~~~~-~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +++|+|+||+|++|+++++.|+++|++|++++|+......+..        ...... ..|+.|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi~   83 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIS   83 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHcCCCEEEE
Confidence            4689999999999999999999999999999998643200000        001111 1389999999999999999999


Q ss_pred             cccCcChhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQLLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +++......+.++++++.++++++|||
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (308)
T 1qyc_A           84 TVGSLQIESQVNIIKAIKEVGTVKRFF  110 (308)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred             CCcchhhhhHHHHHHHHHhcCCCceEe
Confidence            999877778899999999885477764

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.75  E-value=1.2e-17  Score=108.06  Aligned_cols=99  Identities=16%  Similarity=0.189  Sum_probs=76.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---------ccccc-cccccChHHHHHhhcccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---------EIHKE-FQELDEHEKIISILKEVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---------~~~~~-~~d~~~~~~~~~~~~~~d   73 (104)
                      |++++|+||||+|++|+++++.|+++|++|++++|+....... ...         ..... ..|+.|++.+.++++++|
T Consensus        23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  102 (351)
T 3ruf_A           23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD  102 (351)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence            3567999999999999999999999999999999986543110 000         11111 138999999999999999


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|||+++...               +..+.++++++.+.+ +++||
T Consensus       103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v  147 (351)
T 3ruf_A          103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFT  147 (351)
T ss_dssp             EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEE
T ss_pred             EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            9999999743               345678999999887 77764

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.74  E-value=2.8e-17  Score=105.87  Aligned_cols=96  Identities=24%  Similarity=0.305  Sum_probs=71.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      |+|+||||+|++|+++++.|+++|++|++++|++...+............|+.|++++.++++++|+|||+++...    
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~   93 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPR   93 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHHTTTCSEEEEC---------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCCC
Confidence            5899999999999999999999999999999987654221111111112389999999999999999999998643    


Q ss_pred             ---------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ---------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ---------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                               +..+.++++++.+.+ +++||
T Consensus        94 ~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v  122 (342)
T 2x4g_A           94 RWQEEVASALGQTNPFYAACLQAR-VPRIL  122 (342)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHT-CSCEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence                     345679999999887 77764

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.74  E-value=1.6e-17  Score=108.29  Aligned_cols=98  Identities=21%  Similarity=0.253  Sum_probs=74.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccc-ccccc-ChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKE-FQELD-EHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~-~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      |++++|+||||+|++|+++++.|+++ |++|++++|++.............. ..|+. +.+.+.++++++|+|||+|+.
T Consensus        22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~  101 (372)
T 3slg_A           22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI  101 (372)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence            56689999999999999999999998 8999999998765422211111111 13898 899999999999999999997


Q ss_pred             cC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           82 PQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        82 ~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ..               +..+.++++++.+.+  +|||
T Consensus       102 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v  137 (372)
T 3slg_A          102 ATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLV  137 (372)
T ss_dssp             CCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEE
T ss_pred             ccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEE
Confidence            54               234468899998875  5553

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.74  E-value=2.3e-17  Score=106.60  Aligned_cols=93  Identities=20%  Similarity=0.294  Sum_probs=73.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC-
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ-   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~-   83 (104)
                      .++++|+||||+|++|+++++.|+++|++|++++|++...    .....  ..|+.|.+.+.+++.++|+|||+++... 
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~--~~Dl~d~~~~~~~~~~~d~vih~A~~~~~   90 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSGT----GGEEV--VGSLEDGQALSDAIMGVSAVLHLGAFMSW   90 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCSS----CCSEE--ESCTTCHHHHHHHHTTCSEEEECCCCCCS
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCC----CccEE--ecCcCCHHHHHHHHhCCCEEEECCcccCc
Confidence            3457899999999999999999999999999999987541    11111  2489999999999999999999999754 


Q ss_pred             ------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                  +..+.++++++.+.+ +++||
T Consensus        91 ~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V  122 (347)
T 4id9_A           91 APADRDRMFAVNVEGTRRLLDAASAAG-VRRFV  122 (347)
T ss_dssp             SGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEE
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence                        345678999999886 77764

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.74  E-value=3.1e-17  Score=104.41  Aligned_cols=98  Identities=34%  Similarity=0.522  Sum_probs=76.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc---c-----ccccc-cccccChHHHHHhhccccEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK---L-----EIHKE-FQELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~---~-----~~~~~-~~d~~~~~~~~~~~~~~d~vv   76 (104)
                      +++|+|+||+|++|+++++.|+++|++|++++|++.....+ ..   .     ..... ..|+.|++++.++++++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            46899999999999999999999999999999986211001 00   0     01111 138999999999999999999


Q ss_pred             EcccCcChhhHHHHHHHHHHhCCcccCC
Q 046878           77 STVAYPQLLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        77 ~~a~~~~~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+++......+.++++++.++++++|||
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEe
Confidence            9999887888999999999885477764

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.73  E-value=3.3e-17  Score=104.50  Aligned_cols=98  Identities=47%  Similarity=0.706  Sum_probs=76.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--ccccc-----cccccc-cccccChHHHHHhhccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRTSK-----LEIHKE-FQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~~~-----~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      +++|+|+||+|++|+++++.|+++|++|++++|++...  .....     ...... ..|+.|++++.++++++|+|||+
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~   83 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   83 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEEC
Confidence            46899999999999999999999999999999986431  00000     011111 13899999999999999999999


Q ss_pred             ccCc----ChhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYP----QLLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~----~~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ++..    ....+.++++++.++++++|||
T Consensus        84 a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v  113 (313)
T 1qyd_A           84 LAGGVLSHHILEQLKLVEAIKEAGNIKRFL  113 (313)
T ss_dssp             CCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred             CccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence            9976    4667899999999875477764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.72  E-value=2.1e-17  Score=103.88  Aligned_cols=96  Identities=10%  Similarity=0.132  Sum_probs=76.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC-
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ-   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~-   83 (104)
                      |++++++||||+|++|+++++.|++.|++|++++|++....   .........|+.|++++.++++++|+|||++|... 
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~   77 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAMVAGCDGIVHLGGISVE   77 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSCCSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCc
Confidence            34568999999999999999999999999999999876542   11111112389999999999999999999999754 


Q ss_pred             ----------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                +..+.++++++.+.+ ++++|
T Consensus        78 ~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv  107 (267)
T 3rft_A           78 KPFEQILQGNIIGLYNLYEAARAHG-QPRIV  107 (267)
T ss_dssp             CCHHHHHHHHTHHHHHHHHHHHHTT-CCEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence                      446678999998876 67764

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.72  E-value=5.3e-17  Score=103.71  Aligned_cols=92  Identities=25%  Similarity=0.419  Sum_probs=72.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      ++|+||||+|++|+++++.|+++|++|++++|++.... ......  ...|+. .+++.++++++|+|||+++...    
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~--~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~~   78 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-INDYEY--RVSDYT-LEDLINQLNDVDAVVHLAATRGSQGK   78 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------CCEE--EECCCC-HHHHHHHTTTCSEEEECCCCCCSSSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CCceEE--EEcccc-HHHHHHhhcCCCEEEEccccCCCCCh
Confidence            68999999999999999999999999999999844331 111111  123888 9999999999999999999753    


Q ss_pred             -------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                             +..+.++++++.+.+ ++|||
T Consensus        79 ~~~~~~n~~~~~~ll~a~~~~~-~~r~v  105 (311)
T 3m2p_A           79 ISEFHDNEILTQNLYDACYENN-ISNIV  105 (311)
T ss_dssp             GGGTHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence                   456789999999887 88764

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.72  E-value=9.5e-17  Score=104.45  Aligned_cols=97  Identities=14%  Similarity=0.186  Sum_probs=72.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHh--CCCeEEEEEcCCCCc-------c---ccccc---ccccccccccChHHHHHh
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVS--SGHNTFVYARPVTEN-------S---RTSKL---EIHKEFQELDEHEKIISI   68 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~--~~~~v~~~~r~~~~~-------~---~~~~~---~~~~~~~d~~~~~~~~~~   68 (104)
                      .|++++|+||||+|++|+++++.|++  .|++|++++|+....       +   .....   .......|+.+++.+.++
T Consensus         7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   86 (362)
T 3sxp_A            7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRL   86 (362)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHH
T ss_pred             hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHh
Confidence            45668999999999999999999999  899999999976411       0   00000   001111389999999998


Q ss_pred             -hccccEEEEcccCcC-------------hhhHHHHHHHHHHhCCcc
Q 046878           69 -LKEVGVVISTVAYPQ-------------LLDQLKIVDAIKVAGNIK  101 (104)
Q Consensus        69 -~~~~d~vv~~a~~~~-------------~~~~~~l~~~~~~~~~v~  101 (104)
                       ..++|+|||+|+...             +..+.++++++.+.+ ++
T Consensus        87 ~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~  132 (362)
T 3sxp_A           87 EKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK  132 (362)
T ss_dssp             TTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE
T ss_pred             hccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc
Confidence             889999999999643             356779999998776 55

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.71  E-value=1.6e-17  Score=102.54  Aligned_cols=97  Identities=16%  Similarity=0.320  Sum_probs=73.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccc-ccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEI-HKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++++++||||+|++|+++++.|+++|++|++++|++........... .....|+.  +.+.++++++|+|||++|...
T Consensus        19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLE--EDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCT
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCCC
Confidence            566899999999999999999999999999999998765422111111 11112666  677788899999999999763


Q ss_pred             -----------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                 +..+.++++++.+.+ +++||
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv  127 (236)
T 3e8x_A           97 HTGADKTILIDLWGAIKTIQEAEKRG-IKRFI  127 (236)
T ss_dssp             TSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEE
T ss_pred             CCCccccchhhHHHHHHHHHHHHHcC-CCEEE
Confidence                       456789999998887 77764

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.71  E-value=1.9e-16  Score=103.75  Aligned_cols=98  Identities=18%  Similarity=0.259  Sum_probs=74.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC--
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ--   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~--   83 (104)
                      ++++|+||||+|++|+++++.|+++|++|++++|++................|+.|++++.++++++|+|||+++...  
T Consensus        28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~~~~~  107 (379)
T 2c5a_A           28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM  107 (379)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred             cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHHhCCCCEEEECceecCcc
Confidence            457999999999999999999999999999999987554211111111111389999999999999999999998642  


Q ss_pred             --------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                    +..+.++++++.+.+ +++||
T Consensus       108 ~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V  141 (379)
T 2c5a_A          108 GFIQSNHSVIMYNNTMISFNMIEAARING-IKRFF  141 (379)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEE
T ss_pred             cccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence                          234568899998876 77764

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.71  E-value=2.5e-17  Score=103.95  Aligned_cols=96  Identities=17%  Similarity=0.264  Sum_probs=74.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc---
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP---   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~---   82 (104)
                      ++|+||||+|++|+++++.|+++  |++|++++|++.+..............|+.|++++.++++++|+|||+++..   
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN   80 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence            47999999999999999999998  8999999998754421111111111238999999999999999999999964   


Q ss_pred             --ChhhHHHHHHHHHHhCCcccCC
Q 046878           83 --QLLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        83 --~~~~~~~l~~~~~~~~~v~~~i  104 (104)
                        .+..+.++++++.+.+ +++||
T Consensus        81 ~~n~~~~~~l~~a~~~~~-~~~~v  103 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAG-VKHIA  103 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTT-CSEEE
T ss_pred             hHHHHHHHHHHHHHHHcC-CCEEE
Confidence              2456789999999887 77764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.71  E-value=8.5e-17  Score=103.08  Aligned_cols=98  Identities=48%  Similarity=0.810  Sum_probs=76.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC-CCc--ccccc-----cccccc-cccccChHHHHHhhccccEEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV-TEN--SRTSK-----LEIHKE-FQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~-~~~--~~~~~-----~~~~~~-~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +++|+|+||+|++|+++++.|+++|++|++++|++ ...  .....     ...... ..|+.|++++.++++++|+|||
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            46899999999999999999999999999999986 211  00000     011111 1389999999999999999999


Q ss_pred             cccCcChhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQLLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +++......+.++++++.+.++++|||
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEe
Confidence            999876778899999999885477764

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.70  E-value=6.6e-17  Score=99.96  Aligned_cols=99  Identities=16%  Similarity=0.238  Sum_probs=75.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |++++++||||+|++|+++++.|+++|+  +|++++|++................|+.|++++.++++++|+|||++|..
T Consensus        16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~   95 (242)
T 2bka_A           16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   95 (242)
T ss_dssp             HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHHhcCCCEEEECCCcc
Confidence            4557899999999999999999999999  99999998765422111111111238889999999999999999999975


Q ss_pred             C------------hhhHHHHHHHHHHhCCcccCC
Q 046878           83 Q------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        83 ~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .            +..+.++++++.+.+ +++||
T Consensus        96 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv  128 (242)
T 2bka_A           96 RGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFN  128 (242)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEE
T ss_pred             cccCCcccceeeeHHHHHHHHHHHHHCC-CCEEE
Confidence            3            345678888888776 66653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.70  E-value=5.1e-17  Score=105.51  Aligned_cols=101  Identities=21%  Similarity=0.356  Sum_probs=76.6

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhC-CC-eEEEEEcCCCCccccc-cc--cccc-ccccccChHHHHHhhccccEEE
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSS-GH-NTFVYARPVTENSRTS-KL--EIHK-EFQELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~-~v~~~~r~~~~~~~~~-~~--~~~~-~~~d~~~~~~~~~~~~~~d~vv   76 (104)
                      ..+++++|+||||+|++|+++++.|++. |+ +|++++|++.+..... ..  .... ...|+.|.+++.++++++|+||
T Consensus        17 ~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vi   96 (344)
T 2gn4_A           17 NMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICI   96 (344)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred             HhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEE
Confidence            3456789999999999999999999999 97 9999999864331100 00  0111 1238999999999999999999


Q ss_pred             EcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           77 STVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+||...               +.++.++++++.+.+ +++||
T Consensus        97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V  138 (344)
T 2gn4_A           97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVI  138 (344)
T ss_dssp             ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEE
T ss_pred             ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEE
Confidence            9999754               234578999999887 77764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.69  E-value=3e-16  Score=100.72  Aligned_cols=94  Identities=21%  Similarity=0.329  Sum_probs=72.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc-ccc-ccccccChHHHHHhhc--cccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE-IHK-EFQELDEHEKIISILK--EVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~~~-~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~   83 (104)
                      ++|+||||+|++|+++++.|+++|++|++++|+.....  .... ... ...|+.+++.+.++++  ++|+|||+++...
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~~   79 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE--DAITEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSL   79 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch--hhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEEECCcccC
Confidence            68999999999999999999999999999998764431  1111 111 1138999999999998  8999999999753


Q ss_pred             ---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                     +..+.++++++.+.+ +++||
T Consensus        80 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v  114 (330)
T 2c20_A           80 VGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFI  114 (330)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             ccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEE
Confidence                           245678899998876 77764

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.69  E-value=2.4e-17  Score=104.21  Aligned_cols=94  Identities=18%  Similarity=0.243  Sum_probs=73.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc-ccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE-VGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~d~vv~~a~~~~   83 (104)
                      |++++|+|||+ |++|+++++.|+++|++|++++|+++..  .......  ..|+.|++.+.+++++ +|+|||+++...
T Consensus         1 M~~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~--~~Dl~d~~~~~~~~~~~~d~vih~a~~~~   75 (286)
T 3gpi_A            1 MSLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPM--PAGVQTL--IADVTRPDTLASIVHLRPEILVYCVAASE   75 (286)
T ss_dssp             -CCCCEEEECC-SHHHHHHHHHHHHTTCCEEEEECTTSCC--CTTCCEE--ECCTTCGGGCTTGGGGCCSEEEECHHHHH
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcccc--ccCCceE--EccCCChHHHHHhhcCCCCEEEEeCCCCC
Confidence            45578999995 9999999999999999999999987654  1222211  1388888888888887 999999998642


Q ss_pred             ----------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                +..+.++++++.+.+ +++||
T Consensus        76 ~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v  105 (286)
T 3gpi_A           76 YSDEHYRLSYVEGLRNTLSALEGAP-LQHVF  105 (286)
T ss_dssp             HC-----CCSHHHHHHHHHHTTTSC-CCEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhCC-CCEEE
Confidence                      556889999998776 77764

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.69  E-value=2.8e-16  Score=101.26  Aligned_cols=98  Identities=18%  Similarity=0.335  Sum_probs=74.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----cccc-ccccccChHHHHHhhc--cccEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHK-EFQELDEHEKIISILK--EVGVVI   76 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~-~~~d~~~~~~~~~~~~--~~d~vv   76 (104)
                      ++++++||||+|++|+++++.|+++|++|++++|+........ ..     .... ...|+.|++++.++++  ++|+||
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            4569999999999999999999999999999999876542110 00     0111 1138999999999997  799999


Q ss_pred             EcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           77 STVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+|+...               +..+.++++++.+.+ +++||
T Consensus        84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv  125 (341)
T 3enk_A           84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIV  125 (341)
T ss_dssp             ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEE
Confidence            9999753               345678889888876 67764

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.69  E-value=1.7e-16  Score=102.46  Aligned_cols=98  Identities=17%  Similarity=0.261  Sum_probs=71.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccccc------cccc-cccccChHHHHHhhcc--cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLE------IHKE-FQELDEHEKIISILKE--VG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~------~~~~-~~d~~~~~~~~~~~~~--~d   73 (104)
                      +++++|+||||+|++|+++++.|+++|  +.|++++|...... .....      .... ..|+.|++.+.+++++  +|
T Consensus        22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  100 (346)
T 4egb_A           22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-LNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQ  100 (346)
T ss_dssp             --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-GGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCC
T ss_pred             cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-hhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCC
Confidence            345789999999999999999999999  56777776642221 11111      1111 1389999999999987  99


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|||+|+...               +..+.++++++.+.+ +++||
T Consensus       101 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v  145 (346)
T 4egb_A          101 VIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLV  145 (346)
T ss_dssp             EEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEE
T ss_pred             EEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEE
Confidence            9999999753               345689999999886 77764

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.69  E-value=4.1e-17  Score=99.44  Aligned_cols=92  Identities=16%  Similarity=0.206  Sum_probs=70.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc-ccccChHHHHHhhccccEEEEcccCcC---
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIISILKEVGVVISTVAYPQ---   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~~~---   83 (104)
                      |+|+|+||+|++|+++++.|+++|++|++++|++++.....  .....+ .|+.|++.  +.+.++|+|||++|...   
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~   76 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEA   76 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTT
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhh--hhhcCCCEEEECCcCCcccc
Confidence            47999999999999999999999999999999875542111  111111 37777766  77899999999999863   


Q ss_pred             ---hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ---LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ---~~~~~~l~~~~~~~~~v~~~i  104 (104)
                         ...+.++++++.+.+ ++++|
T Consensus        77 ~~~~~~~~~l~~a~~~~~-~~~~v   99 (221)
T 3ew7_A           77 EKHVTSLDHLISVLNGTV-SPRLL   99 (221)
T ss_dssp             TSHHHHHHHHHHHHCSCC-SSEEE
T ss_pred             chHHHHHHHHHHHHHhcC-CceEE
Confidence               456789999998775 66653

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.69  E-value=4.2e-16  Score=100.49  Aligned_cols=99  Identities=16%  Similarity=0.187  Sum_probs=73.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccccccc-ccccccChHHHHHhhcc--ccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHK-EFQELDEHEKIISILKE--VGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~-~~~d~~~~~~~~~~~~~--~d~vv~~a~   80 (104)
                      +++++|+||||+|++|+++++.|+++|++|++++|+...... ........ ...|+.|++++.+++++  +|+|||+++
T Consensus        19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~   98 (333)
T 2q1w_A           19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA   98 (333)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence            456799999999999999999999999999999997643211 11101111 11389999999999988  999999999


Q ss_pred             CcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           81 YPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        81 ~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ...            +..+.++++++.+.+ +++||
T Consensus        99 ~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV  133 (333)
T 2q1w_A           99 SYKDPDDWYNDTLTNCVGGSNVVQAAKKNN-VGRFV  133 (333)
T ss_dssp             CCSCTTCHHHHHHHHTHHHHHHHHHHHHTT-CSEEE
T ss_pred             ecCCCccCChHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence            753            235678999998876 77764

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.68  E-value=2.9e-16  Score=101.73  Aligned_cols=99  Identities=14%  Similarity=0.163  Sum_probs=74.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-ccccc---------ccccc-cccccChHHHHHhhcccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-RTSKL---------EIHKE-FQELDEHEKIISILKEVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-~~~~~---------~~~~~-~~d~~~~~~~~~~~~~~d   73 (104)
                      |++++|+||||+|++|+++++.|++.|++|++++|++.... .....         ..... ..|+.|++++.++++++|
T Consensus        25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d  104 (352)
T 1sb8_A           25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD  104 (352)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence            45679999999999999999999999999999999764321 00000         11111 138999999999999999


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|||+++...               +..+.++++++.+.+ +++||
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v  149 (352)
T 1sb8_A          105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFT  149 (352)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEE
T ss_pred             EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            9999999753               345678999998876 77764

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.68  E-value=7e-16  Score=99.33  Aligned_cols=99  Identities=18%  Similarity=0.273  Sum_probs=74.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccccccc-ccccccChHHHHHhhc--cccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHK-EFQELDEHEKIISILK--EVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~-~~~d~~~~~~~~~~~~--~~d~vv~~a~   80 (104)
                      ++.++|+||||+|++|+++++.|+++|++|++++|+...... ........ ...|+.|++++.+++.  ++|+|||+||
T Consensus        18 ~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~   97 (330)
T 2pzm_A           18 GSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAA   97 (330)
T ss_dssp             TTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCc
Confidence            455799999999999999999999999999999997544310 01111111 1138999999999998  8999999999


Q ss_pred             CcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           81 YPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        81 ~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ...            +..+.++++++.+.+ +++||
T Consensus        98 ~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~-~~~iV  132 (330)
T 2pzm_A           98 AYKDPDDWAEDAATNVQGSINVAKAASKAG-VKRLL  132 (330)
T ss_dssp             CCSCTTCHHHHHHHHTHHHHHHHHHHHHHT-CSEEE
T ss_pred             cCCCccccChhHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            753            245678999998876 77764

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.68  E-value=2.8e-16  Score=102.85  Aligned_cols=99  Identities=18%  Similarity=0.309  Sum_probs=74.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccc-ccccccccc-cccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSR-TSKLEIHKE-FQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~-~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +++++|+||||+|++|+++++.|++.| ++|++++|++..... ......... ..|+.|++.+.++++++|+|||+++.
T Consensus        30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~  109 (377)
T 2q1s_A           30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATY  109 (377)
T ss_dssp             GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCC
T ss_pred             hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCc
Confidence            456789999999999999999999999 999999997654310 100011111 13899999999999999999999997


Q ss_pred             cC---------------hhhHHHHHHHHHHh-CCcccCC
Q 046878           82 PQ---------------LLDQLKIVDAIKVA-GNIKVFV  104 (104)
Q Consensus        82 ~~---------------~~~~~~l~~~~~~~-~~v~~~i  104 (104)
                      ..               +..+.++++++.+. + +++||
T Consensus       110 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V  147 (377)
T 2q1s_A          110 HGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVV  147 (377)
T ss_dssp             SCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEE
T ss_pred             cCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEE
Confidence            54               23567888888876 5 67764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.68  E-value=1.4e-16  Score=100.47  Aligned_cols=95  Identities=19%  Similarity=0.308  Sum_probs=71.6

Q ss_pred             eEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc---C
Q 046878            9 KILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP---Q   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~---~   83 (104)
                      +|+|+||+|++|+++++.|+++  |++|++++|++.+..............|+.|++++.++++++|+|||+++..   .
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~~   80 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQR   80 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHHTTTCSEEEECC-------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchHH
Confidence            5899999999999999999998  8999999998755421111111111238999999999999999999999863   2


Q ss_pred             hhhHHHHHHHHHHhCCcccCC
Q 046878           84 LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +..+.++++++.+.+ +++||
T Consensus        81 ~~~~~~l~~a~~~~~-~~~~v  100 (286)
T 2zcu_A           81 APQHRNVINAAKAAG-VKFIA  100 (286)
T ss_dssp             -CHHHHHHHHHHHHT-CCEEE
T ss_pred             HHHHHHHHHHHHHcC-CCEEE
Confidence            567889999999887 77764

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.67  E-value=7.2e-17  Score=103.81  Aligned_cols=101  Identities=15%  Similarity=0.178  Sum_probs=74.3

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc------cccccc--cccccChHHHHHhhccccE
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK------LEIHKE--FQELDEHEKIISILKEVGV   74 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~------~~~~~~--~~d~~~~~~~~~~~~~~d~   74 (104)
                      ..+++++|+||||+|++|+++++.|+++|++|++++|+.........      ......  ..|+.|++.+.++++++|+
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~   86 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAG   86 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSE
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCE
Confidence            34566799999999999999999999999999999997543211000      011111  2488888888888999999


Q ss_pred             EEEcccCcC------------hhhHHHHHHHHHH-hCCcccCC
Q 046878           75 VISTVAYPQ------------LLDQLKIVDAIKV-AGNIKVFV  104 (104)
Q Consensus        75 vv~~a~~~~------------~~~~~~l~~~~~~-~~~v~~~i  104 (104)
                      |||+|+...            +..+.++++++.+ .+ ++|||
T Consensus        87 vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv  128 (342)
T 1y1p_A           87 VAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFV  128 (342)
T ss_dssp             EEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEE
T ss_pred             EEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEE
Confidence            999999753            3456788998874 44 66654

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.67  E-value=2.6e-16  Score=100.30  Aligned_cols=94  Identities=18%  Similarity=0.329  Sum_probs=70.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      |+|+||||+|++|+++++.|+++|++|++++|++................|+.|.+ +.+++++ |+|||+|+...    
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~~~~~~   78 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAGIKG-DVVFHFAANPEVRLS   78 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTTCCC-SEEEECCSSCSSSGG
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhhcCC-CEEEECCCCCCchhh
Confidence            47999999999999999999999999999999875542111111111123888877 7778877 99999999642    


Q ss_pred             -----------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                 +..+.++++++.+.+ +++||
T Consensus        79 ~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv  109 (312)
T 3ko8_A           79 TTEPIVHFNENVVATFNVLEWARQTG-VRTVV  109 (312)
T ss_dssp             GSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence                       345678999998887 77764

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.67  E-value=6.8e-16  Score=100.12  Aligned_cols=100  Identities=16%  Similarity=0.318  Sum_probs=74.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----cccccc-cccccChHHHHHhhcc--ccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK----LEIHKE-FQELDEHEKIISILKE--VGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~~~~~~-~~d~~~~~~~~~~~~~--~d~vv~   77 (104)
                      |++++|+||||+|++|+++++.|++.|++|++++|++........    ...... ..|+.+++++.+++++  +|+|||
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih   86 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH   86 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence            456799999999999999999999999999999998755421110    001111 1389999999999886  899999


Q ss_pred             cccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +++...               +..+.++++++.+.+.+++||
T Consensus        87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v  128 (357)
T 1rkx_A           87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVV  128 (357)
T ss_dssp             CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEE
T ss_pred             CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence            999642               345578888888764356653

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.67  E-value=3.5e-16  Score=100.74  Aligned_cols=98  Identities=18%  Similarity=0.271  Sum_probs=72.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc---cc---cccccc-ccccChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS---KL---EIHKEF-QELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~---~~---~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      +++|+||||+||+|+++++.|+++|++|+++.|++.......   ..   .....+ .|+.|++.+.++++++|+|||+|
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A   88 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA   88 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence            368999999999999999999999999999888765421110   00   011111 38888888889999999999999


Q ss_pred             cCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878           80 AYPQ--------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        80 ~~~~--------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +...              +.++.++++++.+.++++|||
T Consensus        89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V  127 (338)
T 2rh8_A           89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVI  127 (338)
T ss_dssp             SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred             CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEE
Confidence            8532              235678899888763367764

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.67  E-value=2.1e-16  Score=100.69  Aligned_cols=94  Identities=16%  Similarity=0.206  Sum_probs=72.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~   83 (104)
                      ++++||||+|++|+++++.|+++  |++|++++|++...........  ...|+.|++++.++++  ++|+|||+++...
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~   80 (312)
T 2yy7_A            3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVNSGPF--EVVNALDFNQIEHLVEVHKITDIYLMAALLS   80 (312)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHHSSCE--EECCTTCHHHHHHHHHHTTCCEEEECCCCCH
T ss_pred             ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccCCCce--EEecCCCHHHHHHHHhhcCCCEEEECCccCC
Confidence            58999999999999999999998  8999999998654311111111  1238999999999998  8999999999743


Q ss_pred             --------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                    +..+.++++++.+.+ +++||
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v  114 (312)
T 2yy7_A           81 ATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIF  114 (312)
T ss_dssp             HHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEE
T ss_pred             CchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence                          245678899998876 77764

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.67  E-value=5.1e-16  Score=96.12  Aligned_cols=98  Identities=18%  Similarity=0.256  Sum_probs=74.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++++++|+||+|++|+++++.|+++  |++|++++|++.+.+.. .........|+.|++++.++++++|+|||++|..
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~   80 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPAFQGIDALVILTSAV   80 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHHHcCCCEEEEecccc
Confidence            45679999999999999999999999  79999999986443111 0011111138999999999999999999999853


Q ss_pred             C----------------------------hhhHHHHHHHHHHhCCcccCC
Q 046878           83 Q----------------------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        83 ~----------------------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .                            +..+.++++++.+.+ +++||
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv  129 (253)
T 1xq6_A           81 PKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIV  129 (253)
T ss_dssp             CEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEE
T ss_pred             ccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEE
Confidence            1                            235678999998886 67764

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.66  E-value=1.1e-15  Score=98.43  Aligned_cols=99  Identities=22%  Similarity=0.251  Sum_probs=72.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc--cccc---ccccc-cccccChHHHHHhhcc--ccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKL---EIHKE-FQELDEHEKIISILKE--VGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~---~~~~~-~~d~~~~~~~~~~~~~--~d~vv   76 (104)
                      |++++++||||+|++|+++++.|+++|++|++++|++.....  ....   ..... ..|+.|++++.+++++  +|+||
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   80 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVY   80 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEE
Confidence            345789999999999999999999999999999998754311  0000   01111 1389999999999886  59999


Q ss_pred             EcccCcC---------------hhhHHHHHHHHHHhCCc-ccCC
Q 046878           77 STVAYPQ---------------LLDQLKIVDAIKVAGNI-KVFV  104 (104)
Q Consensus        77 ~~a~~~~---------------~~~~~~l~~~~~~~~~v-~~~i  104 (104)
                      |+||...               +..+.++++++.+.+ + ++||
T Consensus        81 h~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv  123 (345)
T 2z1m_A           81 NLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFY  123 (345)
T ss_dssp             ECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEE
T ss_pred             ECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEE
Confidence            9999753               234678889888775 5 5553

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.66  E-value=5.6e-17  Score=99.20  Aligned_cols=89  Identities=19%  Similarity=0.259  Sum_probs=66.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc-----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP-----   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~-----   82 (104)
                      |+|+||||+|++|+++++.|+++|++|++++|++.+..............|+.|++.  +.+.++|+|||++|..     
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   78 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR   78 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence            479999999999999999999999999999998755421111111111137877776  7789999999999984     


Q ss_pred             ---ChhhHHHHHHHHHHhC
Q 046878           83 ---QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ---~~~~~~~l~~~~~~~~   98 (104)
                         ....+.++++++.+.+
T Consensus        79 ~~~n~~~~~~l~~a~~~~~   97 (224)
T 3h2s_A           79 GYLHLDFATHLVSLLRNSD   97 (224)
T ss_dssp             THHHHHHHHHHHHTCTTCC
T ss_pred             hhHHHHHHHHHHHHHHHcC
Confidence               2556778888887665

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.65  E-value=1.2e-15  Score=98.46  Aligned_cols=95  Identities=13%  Similarity=0.271  Sum_probs=71.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCc--cccccc--ccccc-cccccChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTEN--SRTSKL--EIHKE-FQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~--~~~~~~--~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      |++|+||||+|++|+++++.|+++  |++|++++|+....  ......  ..... ..|+.|++.+.++++++|+|||+|
T Consensus         4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A   83 (348)
T 1oc2_A            4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   83 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence            468999999999999999999998  78999999875321  111111  01111 138999999999999999999999


Q ss_pred             cCcC---------------hhhHHHHHHHHHHhCCcccC
Q 046878           80 AYPQ---------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        80 ~~~~---------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                      +...               +..+.++++++.+.+ + +|
T Consensus        84 ~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~  120 (348)
T 1oc2_A           84 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RF  120 (348)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EE
T ss_pred             cccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eE
Confidence            9753               234678889988876 5 54

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.65  E-value=4.5e-16  Score=98.92  Aligned_cols=97  Identities=16%  Similarity=0.207  Sum_probs=74.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccc--ccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSR--TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++|+|+||+|++|+++++.|+++| ++|++++|++.....  ...........|+.|++++.++++++|+|||+++...
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~   84 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYWE   84 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCCc
Confidence            4689999999999999999999988 999999998754310  0000111112389999999999999999999998532


Q ss_pred             -------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                             ...+.++++++.+.+ +++||
T Consensus        85 ~~~~~~~~~~~~~~~~aa~~~g-v~~iv  111 (299)
T 2wm3_A           85 SCSQEQEVKQGKLLADLARRLG-LHYVV  111 (299)
T ss_dssp             HTCHHHHHHHHHHHHHHHHHHT-CSEEE
T ss_pred             cccchHHHHHHHHHHHHHHHcC-CCEEE
Confidence                   345678999998887 77764

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.65  E-value=3.7e-16  Score=100.67  Aligned_cols=99  Identities=15%  Similarity=0.222  Sum_probs=71.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc---ccc----cccc-cccccChHHHHHhhccccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS---KLE----IHKE-FQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~---~~~----~~~~-~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      ++++|+||||+|++|+++++.|+++|++|+++.|++.......   ...    .... ..|+.|++++.++++++|+|||
T Consensus         4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih   83 (337)
T 2c29_D            4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH   83 (337)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence            4568999999999999999999999999999888765321000   000    0111 1388888899999999999999


Q ss_pred             cccCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQ--------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~--------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|+...              +..+.++++++.+.++++|||
T Consensus        84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV  124 (337)
T 2c29_D           84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLV  124 (337)
T ss_dssp             CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence            998632              234578899888765467764

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.65  E-value=2.2e-15  Score=96.89  Aligned_cols=99  Identities=14%  Similarity=0.249  Sum_probs=70.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCC--ccccccc---cccc-ccccccChHHHHHhhccccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTE--NSRTSKL---EIHK-EFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~--~~~~~~~---~~~~-~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      ++|+|+||||+|++|+++++.|+++|  ++|++++|+...  .+.....   .... ...|+.|++.+.+++.++|+|||
T Consensus         2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih   81 (336)
T 2hun_A            2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH   81 (336)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence            34689999999999999999999986  899999986421  1111111   0111 11389999999999999999999


Q ss_pred             cccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           78 TVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        78 ~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|+...               +..+.++++++.+.+..++||
T Consensus        82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv  123 (336)
T 2hun_A           82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFV  123 (336)
T ss_dssp             CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEE
T ss_pred             CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEE
Confidence            999753               245678889888775224553

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.65  E-value=2e-15  Score=97.01  Aligned_cols=98  Identities=16%  Similarity=0.134  Sum_probs=71.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc--cccc---ccccc-cccccChHHHHHhhcc--ccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKL---EIHKE-FQELDEHEKIISILKE--VGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~---~~~~~-~~d~~~~~~~~~~~~~--~d~vv~   77 (104)
                      ++++|+||||+|++|+++++.|+++|++|++++|++.....  ....   ..... ..|+.|++++.+++++  +|+|||
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih   92 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN   92 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence            45799999999999999999999999999999998654210  0000   01111 1389999999999886  599999


Q ss_pred             cccCcC---------------hhhHHHHHHHHHHhCCc-ccCC
Q 046878           78 TVAYPQ---------------LLDQLKIVDAIKVAGNI-KVFV  104 (104)
Q Consensus        78 ~a~~~~---------------~~~~~~l~~~~~~~~~v-~~~i  104 (104)
                      +++...               +..+.++++++.+.+ + ++||
T Consensus        93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v  134 (335)
T 1rpn_A           93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFY  134 (335)
T ss_dssp             CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEE
T ss_pred             CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEE
Confidence            999754               234678899998876 5 6653

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.64  E-value=2.6e-15  Score=96.07  Aligned_cols=95  Identities=14%  Similarity=0.256  Sum_probs=71.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc--ccEEEEcccCcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE--VGVVISTVAYPQ   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vv~~a~~~~   83 (104)
                      ++++++||||+|++|+++++.|+++|++|++++|++... .   ........|+.|++.+.+++.+  +|+|||+|+...
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~-~---l~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~   86 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAK-L---PNVEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSS   86 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCC-C---TTEEEEECCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc-c---ceeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcccc
Confidence            457899999999999999999999999999999986542 1   1111112389999999999876  899999999754


Q ss_pred             ---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                     +..+.++++++.+.+.+++||
T Consensus        87 ~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv  122 (321)
T 2pk3_A           87 VKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRIL  122 (321)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEE
T ss_pred             hhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence                           234678888887652256654

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.64  E-value=4e-16  Score=97.83  Aligned_cols=93  Identities=13%  Similarity=0.164  Sum_probs=73.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      ++++||||+|++|+++++.|++.|++|++++|++.... .....  ....|+.|++++.++++++|+|||+++...    
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~--~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~   79 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-EAHEE--IVACDLADAQAVHDLVKDCDGIIHLGGVSVERPW   79 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-CTTEE--ECCCCTTCHHHHHHHHTTCSEEEECCSCCSCCCH
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-CCCcc--EEEccCCCHHHHHHHHcCCCEEEECCcCCCCCCH
Confidence            58999999999999999999999999999999875431 11111  111389999999999999999999998742    


Q ss_pred             -------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                             +..+.++++++.+.+ +++||
T Consensus        80 ~~~~~~n~~~~~~l~~a~~~~~-~~~iv  106 (267)
T 3ay3_A           80 NDILQANIIGAYNLYEAARNLG-KPRIV  106 (267)
T ss_dssp             HHHHHHTHHHHHHHHHHHHHTT-CCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence                   345678999998876 77764

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.64  E-value=3.3e-15  Score=95.34  Aligned_cols=95  Identities=20%  Similarity=0.313  Sum_probs=70.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccc-cccccChHHHHHhhc--cccEEEEcccCcC-
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKE-FQELDEHEKIISILK--EVGVVISTVAYPQ-   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~--~~d~vv~~a~~~~-   83 (104)
                      |+++||||+|++|+++++.|+++|++|++++|.......... ..... ..|+.|++++.++++  ++|+|||+++... 
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~   79 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQASV   79 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCCH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-cCeEEEECCCCCHHHHHHHHHhcCCCEEEECccccCc
Confidence            379999999999999999999999999999885432211000 11111 138899999999887  7999999998753 


Q ss_pred             --------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                    +..+.++++++.+.+ +++||
T Consensus        80 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv  113 (311)
T 2p5y_A           80 KVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLV  113 (311)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEE
T ss_pred             hhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence                          234678899988776 77764

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.63  E-value=1.3e-15  Score=97.49  Aligned_cols=84  Identities=14%  Similarity=0.232  Sum_probs=69.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~   83 (104)
                      ++++|+||||+|++|+++++.|++.|++|+++.|+..              .|+.|++++.++++  ++|+|||+++...
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~~--------------~D~~d~~~~~~~~~~~~~d~vih~a~~~~   67 (321)
T 1e6u_A            2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAKVG   67 (321)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCcc--------------CCccCHHHHHHHHHhcCCCEEEEcCeecC
Confidence            4468999999999999999999999999888776531              36888899999998  8999999999753


Q ss_pred             ----------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ----------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ----------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                      +..+.++++++.+.+ +++||
T Consensus        68 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v  103 (321)
T 1e6u_A           68 GIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLL  103 (321)
T ss_dssp             CHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             CcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEE
Confidence                            245678899998876 77764

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.63  E-value=9.8e-16  Score=97.97  Aligned_cols=96  Identities=20%  Similarity=0.325  Sum_probs=68.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEc-CCCCccccc---ccc----ccccc-ccccChHHHHHhhccccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRTS---KLE----IHKEF-QELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r-~~~~~~~~~---~~~----~~~~~-~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      ++|+||||+|++|+++++.|+++|++|+++.| ++.......   ...    ....+ .|+.|++++.++++++|+|||+
T Consensus         2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   81 (322)
T 2p4h_X            2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT   81 (322)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred             CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence            58999999999999999999999999999888 542211100   000    01111 3889999999999999999999


Q ss_pred             ccCcC--------------hhhHHHHHHHHHHh-CCcccCC
Q 046878           79 VAYPQ--------------LLDQLKIVDAIKVA-GNIKVFV  104 (104)
Q Consensus        79 a~~~~--------------~~~~~~l~~~~~~~-~~v~~~i  104 (104)
                      |+...              +.++.++++++.+. + ++|||
T Consensus        82 A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV  121 (322)
T 2p4h_X           82 ASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFI  121 (322)
T ss_dssp             CCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEE
T ss_pred             CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEE
Confidence            97531              23466888888766 4 66664

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.63  E-value=1.2e-15  Score=98.99  Aligned_cols=94  Identities=16%  Similarity=0.118  Sum_probs=72.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-----CeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc---ccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-----HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE---VGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-----~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~vv~~a   79 (104)
                      ++|+||||+|++|+++++.|+++|     ++|++++|++.... ...........|+.|++++.+++++   +|+|||++
T Consensus         2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih~a   80 (364)
T 2v6g_A            2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLTDVTHVFYVT   80 (364)
T ss_dssp             EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCTTCCEEEECC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCCCCCEEEECC
Confidence            589999999999999999999999     99999999875542 1111111111389999999999988   99999999


Q ss_pred             cCcC----------hhhHHHHHHHHHHh--CCcccC
Q 046878           80 AYPQ----------LLDQLKIVDAIKVA--GNIKVF  103 (104)
Q Consensus        80 ~~~~----------~~~~~~l~~~~~~~--~~v~~~  103 (104)
                      +...          +..+.++++++.+.  + +++|
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~  115 (364)
T 2v6g_A           81 WANRSTEQENCEANSKMFRNVLDAVIPNCPN-LKHI  115 (364)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEE
T ss_pred             CCCcchHHHHHHHhHHHHHHHHHHHHHhccc-cceE
Confidence            9753          45678999999876  4 6665

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.63  E-value=1.5e-15  Score=97.86  Aligned_cols=96  Identities=15%  Similarity=0.292  Sum_probs=70.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc--cccc---ccccc-cccccChHHHHHhhcc--ccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKL---EIHKE-FQELDEHEKIISILKE--VGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~---~~~~~-~~d~~~~~~~~~~~~~--~d~vv~~a   79 (104)
                      ++|+||||+|++|+++++.|++.|++|++++|+......  ....   ..... ..|+.|++++.+++++  +|+|||+|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A   81 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEECC
Confidence            589999999999999999999999999999885321100  0000   11111 1389999999999988  99999999


Q ss_pred             cCcC---------------hhhHHHHHHHHHHhCCcc-cCC
Q 046878           80 AYPQ---------------LLDQLKIVDAIKVAGNIK-VFV  104 (104)
Q Consensus        80 ~~~~---------------~~~~~~l~~~~~~~~~v~-~~i  104 (104)
                      +...               +..+.++++++.+.+ ++ +||
T Consensus        82 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv  121 (347)
T 1orr_A           82 GQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNII  121 (347)
T ss_dssp             CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred             cccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEE
Confidence            9753               235678999998876 54 553

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.63  E-value=1.9e-15  Score=96.38  Aligned_cols=100  Identities=21%  Similarity=0.218  Sum_probs=64.2

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-cccccccccccccccChHHHHHhhccccEEEEcc
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-RTSKLEIHKEFQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      |...+++++|+||||+|++|+++++.|+++|++|++++|++.... .........   +....+-+..-+.++|+|||++
T Consensus         1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~d~vi~~a   77 (321)
T 3vps_A            1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL---EKPVLELEERDLSDVRLVYHLA   77 (321)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE---CSCGGGCCHHHHTTEEEEEECC
T ss_pred             CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc---cCCCeeEEeCccccCCEEEECC
Confidence            444455689999999999999999999999999999999875210 011111000   0001111111233899999999


Q ss_pred             cCcC--------------hhhHHHHHHHHHHhCCcccCC
Q 046878           80 AYPQ--------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        80 ~~~~--------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +...              +..+.++++++.+.+ +++||
T Consensus        78 ~~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-v~~~v  115 (321)
T 3vps_A           78 SHKSVPRSFKQPLDYLDNVDSGRHLLALCTSVG-VPKVV  115 (321)
T ss_dssp             CCCCHHHHTTSTTTTHHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             ccCChHHHHhCHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence            8754              345678999999887 78764

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.63  E-value=2e-15  Score=98.31  Aligned_cols=100  Identities=15%  Similarity=0.221  Sum_probs=73.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--cccccccccc-ccc-ccChHHHHHhhccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKLEIHKE-FQE-LDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~~~~~~-~~d-~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      |.+++|+||||+|++|+++++.|+++|++|++++|++....  .......... ..| +.|++++.++++++|+|||+++
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~   82 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT   82 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCC
Confidence            33568999999999999999999999999999999875431  0110001111 238 8999999999999999999987


Q ss_pred             CcC---hhhHHHHHHHHHHhCCcccCC
Q 046878           81 YPQ---LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        81 ~~~---~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ...   .....++++++.+.+++++||
T Consensus        83 ~~~~~~~~~~~~l~~aa~~~g~v~~~V  109 (352)
T 1xgk_A           83 SQAGDEIAIGKDLADAAKRAGTIQHYI  109 (352)
T ss_dssp             STTSCHHHHHHHHHHHHHHHSCCSEEE
T ss_pred             CCCcHHHHHHHHHHHHHHHcCCccEEE
Confidence            641   223488999998874366654

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.62  E-value=6.3e-15  Score=94.85  Aligned_cols=96  Identities=14%  Similarity=0.273  Sum_probs=71.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC---C---CeEEEEEcCCCCc--cccccc---cccc-ccccccChHHHHHhhccccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS---G---HNTFVYARPVTEN--SRTSKL---EIHK-EFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~---~---~~v~~~~r~~~~~--~~~~~~---~~~~-~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      |+|+||||+|++|+++++.|+++   |   ++|++++|+....  ......   .... ...|+.|++++.+++.++|+|
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V   80 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence            47999999999999999999996   7   8999999865321  111111   0111 113899999999999999999


Q ss_pred             EEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           76 ISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        76 v~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ||+++...               +..+.++++++.+.+ +++||
T Consensus        81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v  123 (337)
T 1r6d_A           81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVV  123 (337)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEE
T ss_pred             EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            99999753               345679999998886 77764

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.62  E-value=5.7e-15  Score=95.35  Aligned_cols=96  Identities=20%  Similarity=0.324  Sum_probs=71.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC------cc-ccccc-----cccc-ccccccChHHHHHhhc--cc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE------NS-RTSKL-----EIHK-EFQELDEHEKIISILK--EV   72 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~------~~-~~~~~-----~~~~-~~~d~~~~~~~~~~~~--~~   72 (104)
                      ++|+||||+|++|+++++.|++.|++|++++|+...      .. .....     .... ...|+.+++++.++++  ++
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (348)
T 1ek6_A            3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCC
Confidence            589999999999999999999999999999986543      10 00000     0111 1138999999999988  79


Q ss_pred             cEEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           73 GVVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        73 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+|||+|+...               +..+.++++++.+.+ +++||
T Consensus        83 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv  128 (348)
T 1ek6_A           83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLV  128 (348)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             CEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEE
Confidence            99999999753               345678889888876 77764

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.62  E-value=1.7e-15  Score=96.69  Aligned_cols=94  Identities=22%  Similarity=0.342  Sum_probs=65.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      ++|+||||+|++|+++++.|+++| .++++.++.................|+.+ +++.+++.++|+|||+++...    
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~~~~~~   79 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEAARLVKADLAA-DDIKDYLKGAEEVWHIAANPDVRIG   79 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTTEEEECCCTTT-SCCHHHHTTCSEEEECCCCCCCC-C
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCCcEEEECcCCh-HHHHHHhcCCCEEEECCCCCChhhh
Confidence            589999999999999999999999 54455544332211111111111137887 888888999999999998642    


Q ss_pred             -----------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                 +..+.++++++.+.+ +++||
T Consensus        80 ~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv  110 (313)
T 3ehe_A           80 AENPDEIYRNNVLATYRLLEAMRKAG-VSRIV  110 (313)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence                       346678999998886 77764

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.62  E-value=2.1e-15  Score=97.27  Aligned_cols=93  Identities=17%  Similarity=0.200  Sum_probs=68.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-------CeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-cccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-------HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-EVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-------~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vv   76 (104)
                      +++++++||||+|++|+++++.|+++|       ++|++++|+.................|+.|++.+.+++. ++|+||
T Consensus        12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vi   91 (342)
T 2hrz_A           12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDVIF   91 (342)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTHHHHHHHTCCSEEE
T ss_pred             ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHHHHHHHhcCCCEEE
Confidence            456789999999999999999999999       799999998644311001111111138889899988884 899999


Q ss_pred             EcccCcC--------------hhhHHHHHHHHHHh
Q 046878           77 STVAYPQ--------------LLDQLKIVDAIKVA   97 (104)
Q Consensus        77 ~~a~~~~--------------~~~~~~l~~~~~~~   97 (104)
                      |+|+...              +..+.++++++.+.
T Consensus        92 h~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~  126 (342)
T 2hrz_A           92 HLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIA  126 (342)
T ss_dssp             ECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ECCccCcccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            9999653              23466888888765

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.61  E-value=6.6e-15  Score=94.82  Aligned_cols=94  Identities=18%  Similarity=0.182  Sum_probs=68.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccc-cccccC-hHHHHHhhccccEEEEcccCcC-
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKE-FQELDE-HEKIISILKEVGVVISTVAYPQ-   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~-~~~~~~~~~~~d~vv~~a~~~~-   83 (104)
                      |+|+||||+|++|+++++.|+++ |++|++++|++.............. ..|+.+ .+.+.++++++|+|||+|+... 
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~~   80 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhccCCCEEEEcccccCc
Confidence            47999999999999999999998 8999999998754321111111111 137877 4567888899999999998654 


Q ss_pred             --------------hhhHHHHHHHHHHhCCcccC
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                                    +..+.++++++.+.+  ++|
T Consensus        81 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~  112 (345)
T 2bll_A           81 IEYTRNPLRVFELDFEENLRIIRYCVKYR--KRI  112 (345)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEE
T ss_pred             cchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeE
Confidence                          234568888887764  454

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.61  E-value=7.8e-15  Score=95.74  Aligned_cols=96  Identities=23%  Similarity=0.316  Sum_probs=70.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--ccccc---------ccccc-cccccChHHHHHhhcc--cc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKL---------EIHKE-FQELDEHEKIISILKE--VG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~---------~~~~~-~~d~~~~~~~~~~~~~--~d   73 (104)
                      ++++||||+|++|+++++.|+++|++|++++|++....  .....         ..... ..|+.|++++.+++.+  +|
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  104 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT  104 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999865320  01110         01111 1389999999999886  59


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCc---ccCC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNI---KVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v---~~~i  104 (104)
                      +|||+|+...               +..+.++++++.+.+ +   ++||
T Consensus       105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv  152 (375)
T 1t2a_A          105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFY  152 (375)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEE
T ss_pred             EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEE
Confidence            9999999754               234568889888776 5   4553

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.61  E-value=4.9e-15  Score=94.14  Aligned_cols=78  Identities=21%  Similarity=0.264  Sum_probs=58.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ----   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~----   83 (104)
                      |||+|||||||+|+++++.|+++||+|++++|++...    .         +...+...+.+.++|.|+|+++...    
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----~---------~~~~~~~~~~l~~~d~vihla~~~i~~~~   67 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----R---------ITWDELAASGLPSCDAAVNLAGENILNPL   67 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----E---------EEHHHHHHHCCCSCSEEEECCCCCSSCTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----e---------eecchhhHhhccCCCEEEEeccCcccchh
Confidence            5899999999999999999999999999999986432    1         1111222455789999999998532    


Q ss_pred             ---------------hhhHHHHHHHHHHhC
Q 046878           84 ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ---------------~~~~~~l~~~~~~~~   98 (104)
                                     ...+.++++++...+
T Consensus        68 ~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~   97 (298)
T 4b4o_A           68 RRWNETFQKEVLGSRLETTQLLAKAITKAP   97 (298)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             hhhhhhhhhhhhhHHHHHHHHHHHHHHHhC
Confidence                           334567888877665

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.60  E-value=6.7e-15  Score=93.47  Aligned_cols=89  Identities=17%  Similarity=0.197  Sum_probs=67.3

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc--ccEEEEcccC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE--VGVVISTVAY   81 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vv~~a~~   81 (104)
                      .|++++|+||||+|++|+++++.|+++|+      +....   .......  ..|+.|++.+.+++++  +|+|||+|+.
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~---~~~~~~~--~~D~~d~~~~~~~~~~~~~d~Vih~A~~   71 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED---WVFVSSK--DADLTDTAQTRALFEKVQPTHVIHLAAM   71 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE---EEECCTT--TCCTTSHHHHHHHHHHSCCSEEEECCCC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc---ccccCce--ecccCCHHHHHHHHhhcCCCEEEECcee
Confidence            35678999999999999999999999987      11111   1111111  2389999999999987  9999999997


Q ss_pred             cC----------------hhhHHHHHHHHHHhCCcccCC
Q 046878           82 PQ----------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        82 ~~----------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ..                +..+.++++++.+.+ ++|||
T Consensus        72 ~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v  109 (319)
T 4b8w_A           72 VGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVV  109 (319)
T ss_dssp             CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEE
T ss_pred             cccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEE
Confidence            43                345678999999887 88764

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.59  E-value=8.9e-15  Score=94.92  Aligned_cols=96  Identities=19%  Similarity=0.259  Sum_probs=69.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-----cccEEEEcc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-----EVGVVISTV   79 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vv~~a   79 (104)
                      +.++|+||||+|++|+++++.|+++| ++|++++|++.... ...........|+.+++.+..+++     ++|+|||++
T Consensus        45 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A  123 (357)
T 2x6t_A           45 EGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEG  123 (357)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGGTTTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhcccCceEeeecCcHHHHHHHHhhcccCCCCEEEECC
Confidence            34689999999999999999999999 89999998765421 111111111237888888888886     599999999


Q ss_pred             cCcC-------------hhhHHHHHHHHHHhCCcccCC
Q 046878           80 AYPQ-------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        80 ~~~~-------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +...             +..+.++++++.+.+ + +||
T Consensus       124 ~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V  159 (357)
T 2x6t_A          124 ACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFL  159 (357)
T ss_dssp             SCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEE
T ss_pred             cccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEE
Confidence            9753             345678999998876 6 653

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.59  E-value=1.1e-14  Score=101.75  Aligned_cols=99  Identities=18%  Similarity=0.321  Sum_probs=73.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccc-----cccc-ccccccChHHHHHhhc--cccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKL-----EIHK-EFQELDEHEKIISILK--EVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~-----~~~~-~~~d~~~~~~~~~~~~--~~d~v   75 (104)
                      +++++|+||||+|++|+++++.|+++|++|++++|+...... ....     .... ...|+.+++++.++++  ++|+|
T Consensus         9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V   88 (699)
T 1z45_A            9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV   88 (699)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence            456799999999999999999999999999999987643210 0000     0111 1138999999999988  79999


Q ss_pred             EEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           76 ISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        76 v~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ||+|+...               +..+.++++++.+.+ +++||
T Consensus        89 ih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV  131 (699)
T 1z45_A           89 IHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFV  131 (699)
T ss_dssp             EECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             EECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence            99999754               235678889888876 77764

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.59  E-value=2.3e-15  Score=94.99  Aligned_cols=91  Identities=16%  Similarity=0.125  Sum_probs=66.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC--h
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ--L   84 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~--~   84 (104)
                      +++|+|||| |++|+++++.|+++|++|++++|++................|+.|.+     +.++|+|||+++...  .
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~   78 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGD   78 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBC
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc-----cCCCCEEEECCCcccccc
Confidence            469999998 99999999999999999999999875542111111111112666643     789999999999864  2


Q ss_pred             hhHHHHHHHHHH--hCCcccCC
Q 046878           85 LDQLKIVDAIKV--AGNIKVFV  104 (104)
Q Consensus        85 ~~~~~l~~~~~~--~~~v~~~i  104 (104)
                      ..+.++++++.+  .+ +++||
T Consensus        79 ~~~~~l~~a~~~~~~~-~~~~v   99 (286)
T 3ius_A           79 PVLAALGDQIAARAAQ-FRWVG   99 (286)
T ss_dssp             HHHHHHHHHHHHTGGG-CSEEE
T ss_pred             HHHHHHHHHHHhhcCC-ceEEE
Confidence            345789999987  54 77764

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.59  E-value=1.2e-14  Score=95.37  Aligned_cols=96  Identities=15%  Similarity=0.353  Sum_probs=71.5

Q ss_pred             CeEEEEccCChhhHHHHHHHH-hCCCeEEEEEcCCCCc---------ccccc----------ccc---ccc-cccccChH
Q 046878            8 PKILIFGGTGYLGKYMVKASV-SSGHNTFVYARPVTEN---------SRTSK----------LEI---HKE-FQELDEHE   63 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~-~~~~~v~~~~r~~~~~---------~~~~~----------~~~---~~~-~~d~~~~~   63 (104)
                      |+|+||||+|++|+++++.|+ +.|++|++++|+....         .....          ...   ... ..|+.|++
T Consensus         3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   82 (397)
T 1gy8_A            3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (397)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHH
Confidence            589999999999999999999 9999999999875431         00000          001   111 13899999


Q ss_pred             HHHHhhc--c-ccEEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           64 KIISILK--E-VGVVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        64 ~~~~~~~--~-~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .+.++++  + +|+|||+|+...               +..+.++++++.+.+ +++||
T Consensus        83 ~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv  140 (397)
T 1gy8_A           83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKII  140 (397)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEE
Confidence            9988887  5 999999999754               345678899988876 77764

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.59  E-value=6.5e-15  Score=94.04  Aligned_cols=90  Identities=13%  Similarity=0.208  Sum_probs=70.6

Q ss_pred             eEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC-
Q 046878            9 KILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ-   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~-   83 (104)
                      +|+||||+|++|+++++.|+++  |++|++++|+.....   ...  ....|+.|++++.++++  ++|+|||+++... 
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---~~~--~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~   75 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---GIK--FITLDVSNRDEIDRAVEKYSIDAIFHLAGILSA   75 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---TCC--EEECCTTCHHHHHHHHHHTTCCEEEECCCCCHH
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---Cce--EEEecCCCHHHHHHHHhhcCCcEEEECCcccCC
Confidence            5899999999999999999998  789999998765431   111  11238999999999987  8999999998642 


Q ss_pred             -------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                   +..+.++++++.+.+ +++||
T Consensus        76 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v  108 (317)
T 3ajr_A           76 KGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVV  108 (317)
T ss_dssp             HHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             ccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEE
Confidence                         235678999998876 77764

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.59  E-value=1.8e-15  Score=91.91  Aligned_cols=91  Identities=14%  Similarity=0.178  Sum_probs=69.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC-
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ-   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~-   83 (104)
                      +++++|+||+|++|+++++.|+++|+  +|++++|++...  .......  ..|+.+++++.+++  +|+|||++|... 
T Consensus         5 ~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~--~~~~~~~--~~D~~~~~~~~~~~--~d~vi~~a~~~~~   78 (215)
T 2a35_A            5 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--HPRLDNP--VGPLAELLPQLDGS--IDTAFCCLGTTIK   78 (215)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--CTTEECC--BSCHHHHGGGCCSC--CSEEEECCCCCHH
T ss_pred             CceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc--CCCceEE--eccccCHHHHHHhh--hcEEEECeeeccc
Confidence            46899999999999999999999998  999999987541  1111111  13777777777777  999999999753 


Q ss_pred             ------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                  ...+.++++++.+.+ +++||
T Consensus        79 ~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v  110 (215)
T 2a35_A           79 EAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYL  110 (215)
T ss_dssp             HHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEE
T ss_pred             cCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEE
Confidence                        345678889988876 67654

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.59  E-value=6e-15  Score=93.32  Aligned_cols=80  Identities=19%  Similarity=0.200  Sum_probs=67.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC-
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ-   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~-   83 (104)
                      .++|+||||+|++|+++++.|+++|++|++++|+.               .|+.|++++.++++  ++|+|||+++... 
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~   76 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTAV   76 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCH
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhcCCCEEEECCccCCH
Confidence            46899999999999999999999999999998862               36788888988887  7999999999754 


Q ss_pred             --------------hhhHHHHHHHHHHhCCcccC
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                                    +..+.++++++.+.+ + +|
T Consensus        77 ~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~i  108 (292)
T 1vl0_A           77 DKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EI  108 (292)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EE
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eE
Confidence                          234678899988876 5 54

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.59  E-value=1.7e-14  Score=93.49  Aligned_cols=93  Identities=16%  Similarity=0.305  Sum_probs=68.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCC--Cccccccc---cccc-ccccccChHHHHHhhc--cccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVT--ENSRTSKL---EIHK-EFQELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~--~~~~~~~~---~~~~-~~~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      |+++||||+|++|+++++.|++. |++|++++|+..  ..+.....   .... ...|+.|++++.++++  ++|+|||+
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~   80 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence            37999999999999999999998 799999998752  11111111   0111 1138999999999997  89999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHh--CCcc
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVA--GNIK  101 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~--~~v~  101 (104)
                      |+...               +..+.++++++.+.  + ++
T Consensus        81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~  119 (361)
T 1kew_A           81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LG  119 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SC
T ss_pred             CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cc
Confidence            99754               34567888988876  5 55

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.58  E-value=1.2e-14  Score=94.99  Aligned_cols=93  Identities=18%  Similarity=0.273  Sum_probs=69.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--ccccc--------c-cccc-cccccChHHHHHhhcc--cc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKL--------E-IHKE-FQELDEHEKIISILKE--VG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~--------~-~~~~-~~d~~~~~~~~~~~~~--~d   73 (104)
                      ++|+||||+|++|+++++.|++.|++|++++|+.....  .....        . .... ..|+.|++++.+++.+  +|
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d  108 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD  108 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence            58999999999999999999999999999999865420  00110        0 1111 1389999999999886  59


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCcc
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIK  101 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~  101 (104)
                      +|||+|+...               +..+.++++++.+.+ ++
T Consensus       109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~  150 (381)
T 1n7h_A          109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-ID  150 (381)
T ss_dssp             EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HH
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-Cc
Confidence            9999999754               234678888888765 54

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.58  E-value=6.8e-15  Score=92.87  Aligned_cols=76  Identities=14%  Similarity=0.377  Sum_probs=65.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC--
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ--   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~--   83 (104)
                      |+|+||||+|++|+++++.|+++|++|++++|..               .|+.|.+.+.++++  ++|+|||+++...  
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~~~d~vi~~a~~~~~~   70 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEIRPHIIIHCAAYTKVD   70 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhcCCCEEEECCcccChH
Confidence            3899999999999999999999999999999832               36888899999987  5999999999764  


Q ss_pred             -------------hhhHHHHHHHHHHhC
Q 046878           84 -------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~   98 (104)
                                   +..+.++++++.+.+
T Consensus        71 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~   98 (287)
T 3sc6_A           71 QAEKERDLAYVINAIGARNVAVASQLVG   98 (287)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence                         234678999998886

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.58  E-value=2.5e-14  Score=92.12  Aligned_cols=96  Identities=18%  Similarity=0.390  Sum_probs=69.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccc-----cccc-ccccccChHHHHHhhc--cccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKL-----EIHK-EFQELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~-----~~~~-~~~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      |+++||||+|++|+++++.|+++|++|++++|....... ....     .... ...|+.+++++.++++  ++|+|||+
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~   80 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence            379999999999999999999999999998875432210 0000     0011 1138899999988886  48999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ||...               +..+.++++++.+.+ +++||
T Consensus        81 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv  120 (338)
T 1udb_A           81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFI  120 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             CccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEE
Confidence            98643               234568888888776 67754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.57  E-value=8.3e-15  Score=96.22  Aligned_cols=98  Identities=17%  Similarity=0.186  Sum_probs=69.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-----------------cccc-----cccccc-cccccCh
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-----------------RTSK-----LEIHKE-FQELDEH   62 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-----------------~~~~-----~~~~~~-~~d~~~~   62 (104)
                      .+++|+||||+||+|+++++.|+++|++|++++|......                 ....     ...... ..|+.++
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~   89 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF   89 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence            4579999999999999999999999999999987532110                 0000     001111 1389999


Q ss_pred             HHHHHhhcc--ccEEEEcccCcC------------------hhhHHHHHHHHHHhCCc-ccCC
Q 046878           63 EKIISILKE--VGVVISTVAYPQ------------------LLDQLKIVDAIKVAGNI-KVFV  104 (104)
Q Consensus        63 ~~~~~~~~~--~d~vv~~a~~~~------------------~~~~~~l~~~~~~~~~v-~~~i  104 (104)
                      +++.+++.+  +|+|||+||...                  +.++.++++++.+.+ + ++||
T Consensus        90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V  151 (404)
T 1i24_A           90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLV  151 (404)
T ss_dssp             HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEE
T ss_pred             HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEE
Confidence            999999987  999999998643                  234568888888776 5 3653

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.57  E-value=2.6e-14  Score=92.98  Aligned_cols=93  Identities=22%  Similarity=0.347  Sum_probs=66.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--cccccc--------ccccc-cccccChHHHHHhhcc--cc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRTSKL--------EIHKE-FQELDEHEKIISILKE--VG   73 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~~~~--------~~~~~-~~d~~~~~~~~~~~~~--~d   73 (104)
                      |++++||||+|++|+++++.|+++|++|++++|++...  ......        ..... ..|+.|++++.+++++  +|
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d   80 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD   80 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence            36899999999999999999999999999999976431  001110        01111 1389999999999876  69


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCc
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNI  100 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v  100 (104)
                      +|||+++...               +..+.++++++.+.+ +
T Consensus        81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~  121 (372)
T 1db3_A           81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-L  121 (372)
T ss_dssp             EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-C
T ss_pred             EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence            9999998643               235678899888776 5

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.56  E-value=9.1e-15  Score=93.36  Aligned_cols=86  Identities=16%  Similarity=0.209  Sum_probs=56.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc--ccEEEEcccCcC--
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE--VGVVISTVAYPQ--   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vv~~a~~~~--   83 (104)
                      ++|+||||+|++|+++++.|+++|++|++++|+....    .    ....|+.+++++.+++++  +|+|||+++...  
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~----~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~~~~~   74 (315)
T 2ydy_A            3 RRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP----K----FEQVNLLDSNAVHHIIHDFQPHVIVHCAAERRPD   74 (315)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHHCCSEEEECC------
T ss_pred             CeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC----C----eEEecCCCHHHHHHHHHhhCCCEEEECCcccChh
Confidence            6899999999999999999999999999999875431    1    111378888888888875  899999998643  


Q ss_pred             -------------hhhHHHHHHHHHHhCCcccC
Q 046878           84 -------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                                   +..+.++++++.+.+ + +|
T Consensus        75 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~  105 (315)
T 2ydy_A           75 VVENQPDAASQLNVDASGNLAKEAAAVG-A-FL  105 (315)
T ss_dssp             -------------CHHHHHHHHHHHHHT-C-EE
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eE
Confidence                         345678999998876 4 54

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.56  E-value=1.5e-14  Score=91.72  Aligned_cols=79  Identities=18%  Similarity=0.235  Sum_probs=65.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc--ccEEEEcccCcC--
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE--VGVVISTVAYPQ--   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vv~~a~~~~--   83 (104)
                      |+|+|+||+|++|+++++.|+ +|++|++++|++..           ...|+.|++++.+++++  +|+|||+++...  
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-----------~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~~~   68 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSKE-----------FCGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD   68 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCSS-----------SCCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccccc-----------ccccCCCHHHHHHHHHhcCCCEEEECcccCCHh
Confidence            379999999999999999999 89999999987621           12478899999999986  999999999754  


Q ss_pred             -------------hhhHHHHHHHHHHhC
Q 046878           84 -------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~   98 (104)
                                   +..+.++++++.+.+
T Consensus        69 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~   96 (299)
T 1n2s_A           69 KAESEPELAQLLNATSVEAIAKAANETG   96 (299)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHTTTT
T ss_pred             hhhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence                         234678888888765

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.55  E-value=2.6e-14  Score=90.88  Aligned_cols=93  Identities=19%  Similarity=0.262  Sum_probs=69.3

Q ss_pred             eEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc-----ccEEEEcccCc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE-----VGVVISTVAYP   82 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~d~vv~~a~~~   82 (104)
                      +|+||||+|++|+++++.|+++| ++|++++|++.... ...........|+.+.+.+.+++++     +|+|||+++..
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~   79 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHHHTSCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hhhcCcceeccccccHHHHHHHHhccccCCCcEEEECcccc
Confidence            58999999999999999999999 89999998765421 1111111112378888888888874     99999999975


Q ss_pred             C-------------hhhHHHHHHHHHHhCCcccCC
Q 046878           83 Q-------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        83 ~-------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .             +..+.++++++.+.+ + +||
T Consensus        80 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v  112 (310)
T 1eq2_A           80 STTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFL  112 (310)
T ss_dssp             CTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEE
T ss_pred             cCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEE
Confidence            3             235678999998886 6 653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.55  E-value=1.9e-14  Score=79.98  Aligned_cols=92  Identities=17%  Similarity=0.229  Sum_probs=69.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      +++++|+|+ |++|+.+++.|.+.| ++|++++|++++.+............|+.+.+.+.+.+.++|+||+++|..   
T Consensus         5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~---   80 (118)
T 3ic5_A            5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFF---   80 (118)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGG---
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCch---
Confidence            468999999 999999999999999 899999998755422111111111237888899999999999999999754   


Q ss_pred             hHHHHHHHHHHhCCcccC
Q 046878           86 DQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        86 ~~~~l~~~~~~~~~v~~~  103 (104)
                      ...++++.+.+.+ ++++
T Consensus        81 ~~~~~~~~~~~~g-~~~~   97 (118)
T 3ic5_A           81 LTPIIAKAAKAAG-AHYF   97 (118)
T ss_dssp             GHHHHHHHHHHTT-CEEE
T ss_pred             hhHHHHHHHHHhC-CCEE
Confidence            3578888888876 5554

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.54  E-value=2.1e-14  Score=96.72  Aligned_cols=99  Identities=13%  Similarity=0.276  Sum_probs=73.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC---CCeEEEEEcCCCCcccccc--------------------cccccc-ccccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS---GHNTFVYARPVTENSRTSK--------------------LEIHKE-FQELD   60 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~---~~~v~~~~r~~~~~~~~~~--------------------~~~~~~-~~d~~   60 (104)
                      .++++|+||||+|++|++++++|++.   |++|+++.|+.........                    ...... ..|+.
T Consensus        71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~  150 (478)
T 4dqv_A           71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS  150 (478)
T ss_dssp             SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence            35679999999999999999999998   8999999998653210000                    001111 12665


Q ss_pred             ------ChHHHHHhhccccEEEEcccCcC-----------hhhHHHHHHHHHHhCCcccCC
Q 046878           61 ------EHEKIISILKEVGVVISTVAYPQ-----------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        61 ------~~~~~~~~~~~~d~vv~~a~~~~-----------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                            +.+.+.++++++|+|||+++...           +..+.++++++.+.+ +++||
T Consensus       151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V  210 (478)
T 4dqv_A          151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFT  210 (478)
T ss_dssp             SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEE
T ss_pred             CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEE
Confidence                  66788999999999999999743           457789999998876 77764

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.54  E-value=3.4e-14  Score=89.09  Aligned_cols=82  Identities=17%  Similarity=0.207  Sum_probs=61.3

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc-cccc-cccccChHHHHHhhc-------
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE-IHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~-~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++|+++..+.. .... .... ..|+.|++++.++++       
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            66667778999999999999999999999999999999986443111 0000 0111 138889888887775       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        81 ~iD~lv~~Ag~~   92 (260)
T 1nff_A           81 GLHVLVNNAGIL   92 (260)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999964

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.54  E-value=1.6e-14  Score=94.27  Aligned_cols=77  Identities=18%  Similarity=0.283  Sum_probs=64.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC---
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ---   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~---   83 (104)
                      |+|+||||+|++|+++++.|+++|+ +|+.++|+                   .|++++.++++++|+|||+++...   
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------~d~~~l~~~~~~~d~Vih~a~~~~~~~   61 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------TKEEELESALLKADFIVHLAGVNRPEH   61 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------CCHHHHHHHHHHCSEEEECCCSBCTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------CCHHHHHHHhccCCEEEECCcCCCCCC
Confidence            4799999999999999999999998 88777664                   467788888899999999998743   


Q ss_pred             --------hhhHHHHHHHHHHhCCcc-cCC
Q 046878           84 --------LLDQLKIVDAIKVAGNIK-VFV  104 (104)
Q Consensus        84 --------~~~~~~l~~~~~~~~~v~-~~i  104 (104)
                              +..+.++++++.+.+ ++ +||
T Consensus        62 ~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v   90 (369)
T 3st7_A           62 DKEFSLGNVSYLDHVLDILTRNT-KKPAIL   90 (369)
T ss_dssp             STTCSSSCCBHHHHHHHHHTTCS-SCCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhC-CCCeEE
Confidence                    456789999998876 55 553

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.54  E-value=2.1e-14  Score=88.93  Aligned_cols=82  Identities=13%  Similarity=0.174  Sum_probs=61.9

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----c-ccc-ccccccChHHHHHhhc---
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----E-IHK-EFQELDEHEKIISILK---   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~-~~~-~~~d~~~~~~~~~~~~---   70 (104)
                      |+..++.++++||||+|++|+++++.|+++|++|++++|+++..+... ..    . ... ...|+.|++++.++++   
T Consensus         1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (248)
T 2pnf_A            1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY   80 (248)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            676677889999999999999999999999999999999864431110 00    0 111 1138888888887775   


Q ss_pred             ----cccEEEEcccCc
Q 046878           71 ----EVGVVISTVAYP   82 (104)
Q Consensus        71 ----~~d~vv~~a~~~   82 (104)
                          ++|+|||++|..
T Consensus        81 ~~~~~~d~vi~~Ag~~   96 (248)
T 2pnf_A           81 NLVDGIDILVNNAGIT   96 (248)
T ss_dssp             HHSSCCSEEEECCCCC
T ss_pred             HhcCCCCEEEECCCCC
Confidence                789999999964

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.54  E-value=4.3e-14  Score=98.34  Aligned_cols=96  Identities=18%  Similarity=0.221  Sum_probs=69.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccc-cccccChHH-HHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKE-FQELDEHEK-IISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~-~~~~~~~~d~vv~~a~~~   82 (104)
                      ++++|+||||+|++|+++++.|++. |++|++++|+............... ..|+.++++ +.++++++|+|||+|+..
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~~  393 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIA  393 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCHHHHHHHHHHCSEEEECCCCC
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcHHHHHHhhcCCCEEEECceec
Confidence            4578999999999999999999998 8999999998755421111111111 138887665 777888999999999875


Q ss_pred             C---------------hhhHHHHHHHHHHhCCcccC
Q 046878           83 Q---------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        83 ~---------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                      .               +..+.++++++.+.+  +||
T Consensus       394 ~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~  427 (660)
T 1z7e_A          394 TPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRI  427 (660)
T ss_dssp             CTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEE
T ss_pred             CccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEE
Confidence            4               235678888888765  554

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.53  E-value=6.6e-14  Score=87.71  Aligned_cols=82  Identities=13%  Similarity=0.185  Sum_probs=61.3

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----c-ccccc-ccccChHHHHHhhc---
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----E-IHKEF-QELDEHEKIISILK---   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~-~~~~~-~d~~~~~~~~~~~~---   70 (104)
                      |+..++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...    . ....+ .|+.|++++.++++   
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (263)
T 3ai3_A            1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR   80 (263)
T ss_dssp             CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            66667778999999999999999999999999999999986443110 000    0 01111 38888888877765   


Q ss_pred             ----cccEEEEcccCc
Q 046878           71 ----EVGVVISTVAYP   82 (104)
Q Consensus        71 ----~~d~vv~~a~~~   82 (104)
                          ++|++||+||..
T Consensus        81 ~~~g~id~lv~~Ag~~   96 (263)
T 3ai3_A           81 SSFGGADILVNNAGTG   96 (263)
T ss_dssp             HHHSSCSEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                789999999964

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.53  E-value=7.4e-14  Score=86.60  Aligned_cols=83  Identities=12%  Similarity=0.153  Sum_probs=63.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc----cccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK----EVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vv~~a~~~~   83 (104)
                      ++++||||+|++|+++++.|+++|++|++++|+++..+.    .   ...|+.+++++.++++    ++|+|||++|...
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~---~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~   74 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----D---LSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGV   74 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----C---TTSHHHHHHHHHHHHHHHTTCCSEEEECCCCCT
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----c---ccCCcccHHHHHHHHHHcCCCccEEEECCCCCC
Confidence            589999999999999999999999999999998755411    1   1237777788877775    7899999999754


Q ss_pred             ------------hhhHHHHHHHHHHh
Q 046878           84 ------------LLDQLKIVDAIKVA   97 (104)
Q Consensus        84 ------------~~~~~~l~~~~~~~   97 (104)
                                  +..+.++++++.+.
T Consensus        75 ~~~~~~~~~~~N~~~~~~l~~~~~~~  100 (255)
T 2dkn_A           75 TAANSGLVVAVNYFGVSALLDGLAEA  100 (255)
T ss_dssp             TSSCHHHHHHHHTHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHhHHHHHHHHHHHHH
Confidence                        23445666666543

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.52  E-value=3.2e-14  Score=91.89  Aligned_cols=90  Identities=22%  Similarity=0.361  Sum_probs=61.1

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccc---cccccc-ccccChHHHHHhhccccEEEEc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKL---EIHKEF-QELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~---~~~~~~-~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      .+++++|+||||+|++|+++++.|++.|++|++++|+...... ....   .....+ .|+.+.     .+.++|+|||+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~   98 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHL   98 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEEC
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEEC
Confidence            3566899999999999999999999999999999987543211 1100   001101 144432     36789999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      ++...               +..+.++++++.+.+
T Consensus        99 A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~  133 (343)
T 2b69_A           99 ASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG  133 (343)
T ss_dssp             CSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            99753               234678888888776

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.52  E-value=6.5e-14  Score=88.16  Aligned_cols=78  Identities=12%  Similarity=0.177  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      +++++++||||+|+||+++++.|+++|++|++++|+.+..+............|+.|++++.++++       ++|++||
T Consensus        14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            345789999999999999999999999999999998654422111111111138888887777664       6899999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      +||..
T Consensus        94 nAg~~   98 (266)
T 3p19_A           94 NAGMM   98 (266)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            99975

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.52  E-value=7.7e-14  Score=87.18  Aligned_cols=82  Identities=17%  Similarity=0.214  Sum_probs=61.2

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----------cccccc-ccccChHHHHH
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----------EIHKEF-QELDEHEKIIS   67 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----------~~~~~~-~d~~~~~~~~~   67 (104)
                      |...|+.++++||||+|++|+++++.|+++|++|++++|+.+..+.. ...           .....+ .|+.|++++.+
T Consensus         1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            67778888999999999999999999999999999999986443110 000           111111 38888888887


Q ss_pred             hhcc-------c-cEEEEcccCc
Q 046878           68 ILKE-------V-GVVISTVAYP   82 (104)
Q Consensus        68 ~~~~-------~-d~vv~~a~~~   82 (104)
                      +++.       . |+|||+||..
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~  103 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGIT  103 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCC
T ss_pred             HHHHHHHHhCCCCeEEEECCCcC
Confidence            7754       3 9999999964

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.52  E-value=3e-14  Score=96.80  Aligned_cols=88  Identities=13%  Similarity=0.222  Sum_probs=63.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC---
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ---   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~---   83 (104)
                      +|+|+||||+|++|+++++.|+++|++|++++|++.....      ..  .|+.+  .+.+++.++|+|||+++...   
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~------v~--~d~~~--~~~~~l~~~D~Vih~A~~~~~~~  216 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK------RF--WDPLN--PASDLLDGADVLVHLAGEPIFGR  216 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC------EE--CCTTS--CCTTTTTTCSEEEECCCC-----
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc------ee--ecccc--hhHHhcCCCCEEEECCCCccccc
Confidence            5799999999999999999999999999999998765311      10  12322  23556789999999999752   


Q ss_pred             -------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                   +..+.++++++.....+++||
T Consensus       217 ~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V  250 (516)
T 3oh8_A          217 FNDSHKEAIRESRVLPTKFLAELVAESTQCTTMI  250 (516)
T ss_dssp             CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEE
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEE
Confidence                         345778998843333377764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.52  E-value=8.8e-14  Score=86.02  Aligned_cols=82  Identities=18%  Similarity=0.184  Sum_probs=60.7

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccc-cccccChHHHHHhhc---cccEE
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKE-FQELDEHEKIISILK---EVGVV   75 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~-~~d~~~~~~~~~~~~---~~d~v   75 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++|+++..+.... ...... ..|+.+++++.++++   ++|+|
T Consensus         1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 1cyd_A            1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLL   80 (244)
T ss_dssp             --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEE
Confidence            5666778899999999999999999999999999999998644311100 000111 238899998888875   47999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        81 i~~Ag~~   87 (244)
T 1cyd_A           81 VNNAALV   87 (244)
T ss_dssp             EECCCCC
T ss_pred             EECCccc
Confidence            9999954

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.51  E-value=1.5e-13  Score=85.97  Aligned_cols=82  Identities=20%  Similarity=0.200  Sum_probs=65.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc--ccEEEEcccCcC--
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE--VGVVISTVAYPQ--   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vv~~a~~~~--   83 (104)
                      |+++||||+|++|+++++.|++ |++|++++|++...   .  .   ...|+.|++++.+++++  +|+|||++|...  
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---~--~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~~~   71 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---G--G---YKLDLTDFPRLEDFIIKKRPDVIINAAAMTDVD   71 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---T--C---EECCTTSHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---C--C---ceeccCCHHHHHHHHHhcCCCEEEECCcccChh
Confidence            3799999999999999999995 89999999987421   1  1   22489999999999886  999999999754  


Q ss_pred             -------------hhhHHHHHHHHHHhC
Q 046878           84 -------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~   98 (104)
                                   +..+.++++++.+.+
T Consensus        72 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~   99 (273)
T 2ggs_A           72 KCEIEKEKAYKINAEAVRHIVRAGKVID   99 (273)
T ss_dssp             HHHHCHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             hhhhCHHHHHHHhHHHHHHHHHHHHHhC
Confidence                         234678888888765

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.51  E-value=8.6e-15  Score=97.17  Aligned_cols=96  Identities=16%  Similarity=0.309  Sum_probs=66.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-----------------cccccc-cccccChHHHHH
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-----------------LEIHKE-FQELDEHEKIIS   67 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-----------------~~~~~~-~~d~~~~~~~~~   67 (104)
                      .+++|+||||+|++|+++++.|++.|++|+++.|++........                 ...... ..|+.+++.+. 
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  146 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  146 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence            45689999999999999999999999999999998762100000                 001111 12777766666 


Q ss_pred             hhccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           68 ILKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        68 ~~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .+.++|+|||+|+...            +..+.++++++.+ + +++||
T Consensus       147 ~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v  193 (427)
T 4f6c_A          147 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLI  193 (427)
T ss_dssp             CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEE
T ss_pred             CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEE
Confidence            7789999999999753            4466789999887 4 56654

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.51  E-value=8.2e-14  Score=87.21  Aligned_cols=82  Identities=12%  Similarity=0.162  Sum_probs=60.8

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----c-cccc-cccccChHHHHHhhc--
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----E-IHKE-FQELDEHEKIISILK--   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~-~~~~-~~d~~~~~~~~~~~~--   70 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...     . .... ..|+.|++++.++++  
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (260)
T 2z1n_A            1 MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA   80 (260)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence            55456778999999999999999999999999999999986443111 000     0 1111 138899888887775  


Q ss_pred             ----cccEEEEcccCc
Q 046878           71 ----EVGVVISTVAYP   82 (104)
Q Consensus        71 ----~~d~vv~~a~~~   82 (104)
                          ++|++||++|..
T Consensus        81 ~~~~gid~lv~~Ag~~   96 (260)
T 2z1n_A           81 RDLGGADILVYSTGGP   96 (260)
T ss_dssp             HHTTCCSEEEECCCCC
T ss_pred             HHhcCCCEEEECCCCC
Confidence                489999999964

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.48  E-value=3.1e-13  Score=84.14  Aligned_cols=82  Identities=10%  Similarity=0.092  Sum_probs=59.2

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC-CCccc-ccccc-ccc-ccccccChHHHHHhh-------
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV-TENSR-TSKLE-IHK-EFQELDEHEKIISIL-------   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~-~~~~~-~~~~~-~~~-~~~d~~~~~~~~~~~-------   69 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++|++ +..+. ..... ... ...|+.|++++.+++       
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            1 MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            55667778999999999999999999999999999999987 33211 00000 011 113888888777764       


Q ss_pred             ccccEEEEcccCc
Q 046878           70 KEVGVVISTVAYP   82 (104)
Q Consensus        70 ~~~d~vv~~a~~~   82 (104)
                      .++|++||+||..
T Consensus        81 g~id~lv~nAg~~   93 (249)
T 2ew8_A           81 GRCDILVNNAGIY   93 (249)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence            4789999999964

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.48  E-value=2.9e-13  Score=84.53  Aligned_cols=82  Identities=16%  Similarity=0.248  Sum_probs=59.9

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~----   70 (104)
                      |+..+++++++||||+|+||+++++.|+++|++|++++|+.+..+... ..     .......|+.|++++.++++    
T Consensus         1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            666677789999999999999999999999999999999876542110 00     11111138999888887775    


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        ++|++||+||..
T Consensus        81 ~g~id~lv~nAg~~   94 (252)
T 3h7a_A           81 HAPLEVTIFNVGAN   94 (252)
T ss_dssp             HSCEEEEEECCCCC
T ss_pred             hCCceEEEECCCcC
Confidence              679999999974

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.48  E-value=5.7e-13  Score=83.57  Aligned_cols=74  Identities=14%  Similarity=0.251  Sum_probs=58.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~~   78 (104)
                      ++++++||||+|+||+++++.|+++|++|++++|+.......   .......|+.|++++.++++       ++|++||+
T Consensus        27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~n  103 (260)
T 3un1_A           27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADP---DIHTVAGDISKPETADRIVREGIERFGRIDSLVNN  103 (260)
T ss_dssp             TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSST---TEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccC---ceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEEC
Confidence            457899999999999999999999999999999987554211   11111238888888877765       78999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      ||..
T Consensus       104 Ag~~  107 (260)
T 3un1_A          104 AGVF  107 (260)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9974

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.48  E-value=1.8e-13  Score=86.43  Aligned_cols=78  Identities=15%  Similarity=0.254  Sum_probs=58.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-cccccc-ccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-EIHKEF-QELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-~~~~~~-~d~~~~~~~~~~~~-------~~d~   74 (104)
                      +++++++||||+|++|+++++.|+++|++|++++|+.+....... . .....+ .|+.|++++.+++.       ++|+
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~   82 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV   82 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence            345789999999999999999999999999999998765421110 0 111111 28888888877765       6899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus        83 lv~~Ag~~   90 (281)
T 3m1a_A           83 LVNNAGRT   90 (281)
T ss_dssp             EEECCCCE
T ss_pred             EEECCCcC
Confidence            99999964

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.47  E-value=2.5e-13  Score=85.04  Aligned_cols=79  Identities=11%  Similarity=0.191  Sum_probs=59.1

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-ccccc-cccccChHHHHHhhc-------ccc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHKE-FQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~~-~~d~~~~~~~~~~~~-------~~d   73 (104)
                      .++.++++||||+|+||+++++.|+++|++|.+++|+.+...... .. ..... ..|+.|++++.++++       ++|
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   84 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLD   84 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCC
Confidence            456689999999999999999999999999999999865432110 00 00111 138888888877765       789


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||+||..
T Consensus        85 ~lv~~Ag~~   93 (259)
T 4e6p_A           85 ILVNNAALF   93 (259)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCcC
Confidence            999999974

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.47  E-value=4e-13  Score=83.13  Aligned_cols=82  Identities=17%  Similarity=0.177  Sum_probs=61.4

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccc-cccccChHHHHHhhc---cccEE
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKE-FQELDEHEKIISILK---EVGVV   75 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~-~~d~~~~~~~~~~~~---~~d~v   75 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++|++++.+.. ........ ..|+.|++++.++++   ++|+|
T Consensus         1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~v   80 (244)
T 3d3w_A            1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEE
Confidence            55556778999999999999999999999999999999986443111 00000111 238899998888875   58999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        81 i~~Ag~~   87 (244)
T 3d3w_A           81 VNNAAVA   87 (244)
T ss_dssp             EECCCCC
T ss_pred             EECCccC
Confidence            9999964

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.46  E-value=5.5e-13  Score=84.01  Aligned_cols=82  Identities=15%  Similarity=0.219  Sum_probs=60.6

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc--ccccccccccChHHHHHhhc-------
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL--EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~--~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      |...++.++++||||+|+||+++++.|+++|++|++++|+.+...... ..  .......|+.|++++.++++       
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFG   84 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            444566789999999999999999999999999999999876542111 00  11111138888888877765       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        85 ~id~lv~nAg~~   96 (271)
T 3tzq_B           85 RLDIVDNNAAHS   96 (271)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999975

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.46  E-value=3.3e-13  Score=83.85  Aligned_cols=78  Identities=13%  Similarity=0.230  Sum_probs=57.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--cc-ccccccccChHHHHHhh------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--EI-HKEFQELDEHEKIISIL------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~~-~~~~~d~~~~~~~~~~~------~~~d~   74 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|++++.+.. ...  .. .....|+.|++++.+++      .++|+
T Consensus         9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~   88 (254)
T 2wsb_A            9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI   88 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence            4557899999999999999999999999999999986543111 000  11 11113888888887776      46899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        89 li~~Ag~~   96 (254)
T 2wsb_A           89 LVNSAGIA   96 (254)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99999964

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.46  E-value=4.5e-13  Score=83.71  Aligned_cols=82  Identities=10%  Similarity=0.104  Sum_probs=57.9

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cc-cccc-cccccChHHHHHhhc-------
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LE-IHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~-~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      |...++.++++||||+|+||+++++.|+++|++|++++|+.+..+.... .. .... ..|+.|++++.++++       
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFG   80 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4455677899999999999999999999999999999998765422111 10 1111 128888888777764       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        81 ~id~lv~nAg~~   92 (257)
T 3tpc_A           81 HVHGLVNCAGTA   92 (257)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999975

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.45  E-value=3e-13  Score=84.86  Aligned_cols=83  Identities=8%  Similarity=0.168  Sum_probs=60.4

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------cccc-ccccccChHHHHHhhc--
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHK-EFQELDEHEKIISILK--   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~-~~~d~~~~~~~~~~~~--   70 (104)
                      |+.+++.++++||||+|++|+++++.|+++|++|++++|+.+..... ...      .... ...|+.|++++.++++  
T Consensus         1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (267)
T 2gdz_A            1 MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV   80 (267)
T ss_dssp             -CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHH
Confidence            66666778999999999999999999999999999999986432110 000      0011 1138889888877764  


Q ss_pred             -----cccEEEEcccCcC
Q 046878           71 -----EVGVVISTVAYPQ   83 (104)
Q Consensus        71 -----~~d~vv~~a~~~~   83 (104)
                           ++|++||++|...
T Consensus        81 ~~~~g~id~lv~~Ag~~~   98 (267)
T 2gdz_A           81 VDHFGRLDILVNNAGVNN   98 (267)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCCCCC
Confidence                 4799999999753

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.45  E-value=2e-13  Score=84.88  Aligned_cols=81  Identities=15%  Similarity=0.147  Sum_probs=59.8

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC-CCCcccc-ccc----ccccc-cccccChHHHHHhhc---
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP-VTENSRT-SKL----EIHKE-FQELDEHEKIISILK---   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~-~~~~~~~-~~~----~~~~~-~~d~~~~~~~~~~~~---   70 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++|+ ++..+.. ...    ..... ..|+.+++++.++++   
T Consensus         1 m~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            1 MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             -CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            4445667899999999999999999999999999999998 5443111 000    01111 138889888888775   


Q ss_pred             ----cccEEEEcccC
Q 046878           71 ----EVGVVISTVAY   81 (104)
Q Consensus        71 ----~~d~vv~~a~~   81 (104)
                          ++|+|||+||.
T Consensus        81 ~~~g~id~vi~~Ag~   95 (258)
T 3afn_B           81 AKFGGIDVLINNAGG   95 (258)
T ss_dssp             HHHSSCSEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence                78999999996

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.44  E-value=2.6e-12  Score=80.03  Aligned_cols=74  Identities=9%  Similarity=0.205  Sum_probs=57.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+.. .   ........|+.|++++.++++       ++|++||
T Consensus         5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-Q---YPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-C---CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-c---CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4567999999999999999999999999999999986532 1   111111238888888877764       6899999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      ++|..
T Consensus        81 ~Ag~~   85 (250)
T 2fwm_X           81 AAGIL   85 (250)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            99964

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.44  E-value=2.5e-12  Score=80.78  Aligned_cols=73  Identities=8%  Similarity=0.176  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+++..   .....  ...|+.|++++.++++       ++|++||
T Consensus         6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~---~~~~~--~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE---AKYDH--IECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS---CSSEE--EECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC---CceEE--EEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            5668999999999999999999999999999999986541   11111  1138888888777664       6899999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      +||..
T Consensus        81 ~Ag~~   85 (264)
T 2dtx_A           81 NAGIE   85 (264)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            99964

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.44  E-value=5.8e-13  Score=82.51  Aligned_cols=78  Identities=15%  Similarity=0.116  Sum_probs=56.9

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc---------c
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK---------E   71 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------~   71 (104)
                      |..+.++++++||||+|++|+++++.|+++|++|++++|+++....  ..  .....|+.|++++.++++         +
T Consensus         1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~--~~--~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS--AS--VIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS--EE--EECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC--Cc--EEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5444556789999999999999999999999999999998765421  11  111137888877766653         6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        77 iD~lv~~Ag~~   87 (241)
T 1dhr_A           77 VDAILCVAGGW   87 (241)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEEccccc
Confidence            89999999963

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.44  E-value=7.5e-13  Score=82.38  Aligned_cols=82  Identities=15%  Similarity=0.217  Sum_probs=59.4

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~----   70 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++|+.+..+.. ...     .......|+.|++++.++++    
T Consensus         1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   80 (247)
T 2jah_A            1 MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE   80 (247)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            55557778999999999999999999999999999999986443211 000     01111138888888777654    


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|++||++|..
T Consensus        81 ~~g~id~lv~nAg~~   95 (247)
T 2jah_A           81 ALGGLDILVNNAGIM   95 (247)
T ss_dssp             HHSCCSEEEECCCCC
T ss_pred             HcCCCCEEEECCCCC
Confidence               689999999964

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.44  E-value=5.7e-13  Score=83.22  Aligned_cols=79  Identities=15%  Similarity=0.230  Sum_probs=58.6

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--ccccccccccChHHHHHhhc-------ccc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--EIHKEFQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~~~~~~~d~~~~~~~~~~~~-------~~d   73 (104)
                      .++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...  .......|+.+++++.++++       ++|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD   81 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            35667999999999999999999999999999999986443111 000  01111138888888877765       789


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||+||..
T Consensus        82 ~lv~nAg~~   90 (254)
T 1hdc_A           82 GLVNNAGIS   90 (254)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999964

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.44  E-value=6.6e-13  Score=82.88  Aligned_cols=77  Identities=12%  Similarity=0.175  Sum_probs=57.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~~-------~~   72 (104)
                      |+.++++||||+|++|+++++.|+++|++|++++|+++.. .....     .......|+.|++++.++++       ++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   80 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAP-ALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGV   80 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHH-HHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4567999999999999999999999999999999886511 11111     01111138889888887775       78


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        81 d~lv~~Ag~~   90 (255)
T 2q2v_A           81 DILVNNAGIQ   90 (255)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999964

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.43  E-value=3.1e-14  Score=96.40  Aligned_cols=95  Identities=16%  Similarity=0.312  Sum_probs=67.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-----------------cccccc-cccccChHHHHHh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-----------------LEIHKE-FQELDEHEKIISI   68 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-----------------~~~~~~-~~d~~~~~~~~~~   68 (104)
                      +++|+||||+|++|+++++.|.+.|++|+++.|++........                 ...... ..|+.+++.+. +
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~  228 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L  228 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence            4689999999999999999998889999999998762100000                 001111 12777766666 7


Q ss_pred             hccccEEEEcccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           69 LKEVGVVISTVAYPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        69 ~~~~d~vv~~a~~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ..++|+|||+++...            +..+.++++++.+ + +++||
T Consensus       229 ~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v  274 (508)
T 4f6l_B          229 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLI  274 (508)
T ss_dssp             SSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEE
T ss_pred             ccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEE
Confidence            789999999999753            4567899998887 3 46653

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.43  E-value=3.9e-13  Score=85.40  Aligned_cols=78  Identities=12%  Similarity=0.172  Sum_probs=59.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc-cccc-cccccChHHHHHhhc---cccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE-IHKE-FQELDEHEKIISILK---EVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~-~~~~-~~d~~~~~~~~~~~~---~~d~vv~~   78 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+..+.+.. .... .... ..|+.|++++.++++   ++|++||+
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            4567999999999999999999999999999999986543211 0000 1111 128999998888876   67999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      ||..
T Consensus        94 Ag~~   97 (291)
T 3rd5_A           94 AGIM   97 (291)
T ss_dssp             CCCC
T ss_pred             CcCC
Confidence            9964

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.43  E-value=3.6e-13  Score=82.89  Aligned_cols=76  Identities=16%  Similarity=0.154  Sum_probs=55.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccc-cccccChHHHHHhhc-------cccEEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKE-FQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~-~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      +++++||||+|++|+++++.|+++|++|++++|+++..+... ....... ..|+.|++++.+++.       ++|++||
T Consensus         5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (234)
T 2ehd_A            5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN   84 (234)
T ss_dssp             CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            358999999999999999999999999999999764431110 0111111 138888887777654       6799999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      ++|..
T Consensus        85 ~Ag~~   89 (234)
T 2ehd_A           85 NAGVG   89 (234)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            99964

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.43  E-value=7.5e-13  Score=83.72  Aligned_cols=81  Identities=15%  Similarity=0.205  Sum_probs=58.4

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc-------cccc-cccccChHHHHHhhc-
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE-------IHKE-FQELDEHEKIISILK-   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~-------~~~~-~~d~~~~~~~~~~~~-   70 (104)
                      |...++.++++||||+|+||+++++.|+++|++|++++|+++..+.. ....       .... ..|+.|++++.++++ 
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            44456678999999999999999999999999999999986543211 0000       1111 138888888777664 


Q ss_pred             ------cccEEEEcccC
Q 046878           71 ------EVGVVISTVAY   81 (104)
Q Consensus        71 ------~~d~vv~~a~~   81 (104)
                            ++|++||+||.
T Consensus        85 ~~~~~g~id~lv~nAg~  101 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGG  101 (281)
T ss_dssp             HHHHHSCCCEEEECCCC
T ss_pred             HHHHcCCCCEEEECCCc
Confidence                  57999999996

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.42  E-value=1.1e-12  Score=81.91  Aligned_cols=77  Identities=13%  Similarity=0.179  Sum_probs=57.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhc-------cccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILK-------EVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv   76 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++. +.. ..........|+.|++++.++++       ++|++|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhCCEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            556799999999999999999999999999999998754 211 11111111138888887777654       679999


Q ss_pred             EcccCc
Q 046878           77 STVAYP   82 (104)
Q Consensus        77 ~~a~~~   82 (104)
                      |+||..
T Consensus        83 ~~Ag~~   88 (256)
T 2d1y_A           83 NNAAIA   88 (256)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999964

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.42  E-value=5.6e-13  Score=82.39  Aligned_cols=78  Identities=10%  Similarity=0.140  Sum_probs=58.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccccc--ccccc-cccccChHHHHHhhc---------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKL--EIHKE-FQELDEHEKIISILK---------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~--~~~~~-~~d~~~~~~~~~~~~---------   70 (104)
                      |++++++||||+|++|+++++.|+++|  ++|++++|+....+.....  ..... ..|+.+++++.++++         
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   80 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCC
Confidence            345789999999999999999999999  9999999987554211111  01111 138888888877765         


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||++|..
T Consensus        81 ~id~li~~Ag~~   92 (250)
T 1yo6_A           81 GLSLLINNAGVL   92 (250)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCcEEEECCccc
Confidence            799999999864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.42  E-value=1.3e-12  Score=81.22  Aligned_cols=78  Identities=9%  Similarity=0.098  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccc-cccccChHHHHHhh---ccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKE-FQELDEHEKIISIL---KEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~---~~~d~vv~~a~   80 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|++++.+.......... ..|+.|++++.+.+   .++|++||++|
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            566799999999999999999999999999999998654321111111111 13888888777654   57899999999


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        84 ~~   85 (246)
T 2ag5_A           84 FV   85 (246)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.42  E-value=5.8e-13  Score=83.13  Aligned_cols=82  Identities=16%  Similarity=0.195  Sum_probs=59.2

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc-CCCCcccc-ccc----cccc-ccccccChHHHHHhhc---
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRT-SKL----EIHK-EFQELDEHEKIISILK---   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r-~~~~~~~~-~~~----~~~~-~~~d~~~~~~~~~~~~---   70 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++| +.+..+.. ...    .... ...|+.+++++.++++   
T Consensus         1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            445567789999999999999999999999999999998 43322110 000    0011 1138888888777765   


Q ss_pred             ----cccEEEEcccCc
Q 046878           71 ----EVGVVISTVAYP   82 (104)
Q Consensus        71 ----~~d~vv~~a~~~   82 (104)
                          ++|+|||++|..
T Consensus        81 ~~~g~id~li~~Ag~~   96 (261)
T 1gee_A           81 KEFGKLDVMINNAGLE   96 (261)
T ss_dssp             HHHSCCCEEEECCCCC
T ss_pred             HHcCCCCEEEECCCCC
Confidence                789999999964

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.42  E-value=5.6e-13  Score=84.06  Aligned_cols=81  Identities=9%  Similarity=0.149  Sum_probs=59.2

Q ss_pred             CCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-----
Q 046878            2 EGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-----   70 (104)
Q Consensus         2 ~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-----   70 (104)
                      ...++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ..     .......|+.|++++.++++     
T Consensus        23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (270)
T 3ftp_A           23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKE  102 (270)
T ss_dssp             CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            33456678999999999999999999999999999999865432110 00     11111138888887777664     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        ++|++||+||..
T Consensus       103 ~g~iD~lvnnAg~~  116 (270)
T 3ftp_A          103 FGALNVLVNNAGIT  116 (270)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence              689999999964

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.42  E-value=6.5e-13  Score=83.15  Aligned_cols=78  Identities=17%  Similarity=0.206  Sum_probs=56.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh--------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL--------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~--------~   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|++...+.. ...     .......|+.+++++.+++        .
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   91 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG   91 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4567899999999999999999999999999999976443110 000     1111113888888777766        4


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+|||++|..
T Consensus        92 ~id~li~~Ag~~  103 (266)
T 1xq1_A           92 KLDILINNLGAI  103 (266)
T ss_dssp             CCSEEEEECCC-
T ss_pred             CCcEEEECCCCC
Confidence            689999999964

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.42  E-value=1.4e-12  Score=81.69  Aligned_cols=78  Identities=10%  Similarity=0.136  Sum_probs=58.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--ccccccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--EIHKEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~~~~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...  .......|+.|++++.++++       ++|+
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~   89 (263)
T 3ak4_A           10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDL   89 (263)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCE
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4557899999999999999999999999999999986443111 000  11111138888888877765       7899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus        90 lv~~Ag~~   97 (263)
T 3ak4_A           90 LCANAGVS   97 (263)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCcC
Confidence            99999964

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.42  E-value=4.3e-13  Score=83.22  Aligned_cols=79  Identities=13%  Similarity=0.225  Sum_probs=58.4

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---cccccc-ccccChHHHHHhhc-------c
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---EIHKEF-QELDEHEKIISILK-------E   71 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~~~~~~-~d~~~~~~~~~~~~-------~   71 (104)
                      .++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...   .....+ .|+.+++++.++++       +
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46678999999999999999999999999999999986433111 000   111111 38888888877765       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus        83 id~li~~Ag~~   93 (251)
T 1zk4_A           83 VSTLVNNAGIA   93 (251)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.41  E-value=1.1e-12  Score=82.10  Aligned_cols=78  Identities=13%  Similarity=0.240  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh--------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL--------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~--------~   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...     .......|+.|++++.+++        .
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   86 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG   86 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999986543110 000     1111113888888877766        4


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        87 ~id~lv~~Ag~~   98 (260)
T 2ae2_A           87 KLNILVNNAGIV   98 (260)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999964

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.41  E-value=4.1e-12  Score=79.04  Aligned_cols=73  Identities=15%  Similarity=0.200  Sum_probs=57.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+...     ....|+.|++++.++++       ++|++||
T Consensus        13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~   87 (247)
T 1uzm_A           13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQGPVEVLVS   87 (247)
T ss_dssp             CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHHSSCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-----CeeccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            55678999999999999999999999999999999875542111     11238888887777654       5799999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      ++|..
T Consensus        88 ~Ag~~   92 (247)
T 1uzm_A           88 NAGLS   92 (247)
T ss_dssp             ECSCC
T ss_pred             CCCCC
Confidence            99974

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.41  E-value=2e-12  Score=82.35  Aligned_cols=78  Identities=14%  Similarity=0.203  Sum_probs=57.7

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc---------cccccc-cccccChHHHHHhhc--
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK---------LEIHKE-FQELDEHEKIISILK--   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~---------~~~~~~-~~d~~~~~~~~~~~~--   70 (104)
                      .++.++++||||+|++|+++++.|+++|++|++++|+.+..+.. ..         ...... ..|+.+++++.++++  
T Consensus        15 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   94 (303)
T 1yxm_A           15 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   94 (303)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHH
Confidence            35567999999999999999999999999999999986433110 00         001111 138888888877765  


Q ss_pred             -----cccEEEEcccC
Q 046878           71 -----EVGVVISTVAY   81 (104)
Q Consensus        71 -----~~d~vv~~a~~   81 (104)
                           ++|+|||+||.
T Consensus        95 ~~~~g~id~li~~Ag~  110 (303)
T 1yxm_A           95 LDTFGKINFLVNNGGG  110 (303)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence                 48999999995

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.41  E-value=7.7e-13  Score=82.79  Aligned_cols=81  Identities=20%  Similarity=0.200  Sum_probs=56.1

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-----ccc-ccccc-cccccChHHHHHhhc---
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-----SKL-EIHKE-FQELDEHEKIISILK---   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-----~~~-~~~~~-~~d~~~~~~~~~~~~---   70 (104)
                      |.....+++++||||+|++|+++++.|+++|++|.+++|+.......     ... ..... ..|+.|++++.++++   
T Consensus         1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   80 (264)
T 3i4f_A            1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM   80 (264)
T ss_dssp             -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            54444567899999999999999999999999999988875432110     000 01111 128889888877764   


Q ss_pred             ----cccEEEEcccC
Q 046878           71 ----EVGVVISTVAY   81 (104)
Q Consensus        71 ----~~d~vv~~a~~   81 (104)
                          ++|++||+||.
T Consensus        81 ~~~g~id~lv~~Ag~   95 (264)
T 3i4f_A           81 SHFGKIDFLINNAGP   95 (264)
T ss_dssp             HHHSCCCEEECCCCC
T ss_pred             HHhCCCCEEEECCcc
Confidence                68999999993

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.41  E-value=1.3e-12  Score=81.89  Aligned_cols=82  Identities=12%  Similarity=0.206  Sum_probs=59.1

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~----   70 (104)
                      |...++.++++||||+|++|+++++.|+++|++|++++|+.+..+.. ...     .......|+.+++++.+++.    
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            1 MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            55567778999999999999999999999999999999986443111 000     01111138888887776654    


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|++||++|..
T Consensus        81 ~~g~id~lv~nAg~~   95 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQ   95 (262)
T ss_dssp             HHSCCCEEEECCCCC
T ss_pred             HhCCCCEEEECCCCC
Confidence               689999999865

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.40  E-value=1.1e-12  Score=81.20  Aligned_cols=78  Identities=17%  Similarity=0.208  Sum_probs=57.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c--ccccccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L--EIHKEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      |++++++||||+|+||+++++.|+++|++|.+++|+.+..+.... .  .......|+.|++++.++++       .+|+
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   80 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPEL   80 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcE
Confidence            455789999999999999999999999999999998654421100 0  11111138888888777664       5799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus        81 lvnnAg~~   88 (235)
T 3l6e_A           81 VLHCAGTG   88 (235)
T ss_dssp             EEEECCCC
T ss_pred             EEECCCCC
Confidence            99999974

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.40  E-value=9e-13  Score=81.88  Aligned_cols=78  Identities=9%  Similarity=0.118  Sum_probs=58.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----cccc-ccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+.. ...    .... ...|+.|++++.++++       +
T Consensus         9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   88 (255)
T 1fmc_A            9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            5567999999999999999999999999999999986433110 000    0011 1138888888887765       7


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus        89 ~d~vi~~Ag~~   99 (255)
T 1fmc_A           89 VDILVNNAGGG   99 (255)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.40  E-value=4.2e-12  Score=79.38  Aligned_cols=73  Identities=16%  Similarity=0.239  Sum_probs=56.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      +++++++||||+|++|+++++.|+++|++|++++|+++..+   ...  ....|+.|++++.++++       .+|++||
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~--~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~   93 (253)
T 2nm0_A           19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---GFL--AVKCDITDTEQVEQAYKEIEETHGPVEVLIA   93 (253)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---TSE--EEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---cce--EEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            45578999999999999999999999999999999865441   111  11138888888777664       4699999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      ++|..
T Consensus        94 nAg~~   98 (253)
T 2nm0_A           94 NAGVT   98 (253)
T ss_dssp             ECSCC
T ss_pred             CCCCC
Confidence            99964

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.40  E-value=1.2e-12  Score=82.33  Aligned_cols=83  Identities=17%  Similarity=0.279  Sum_probs=60.5

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc-------cccccccccccChHHHHHhhc--
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK-------LEIHKEFQELDEHEKIISILK--   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~-------~~~~~~~~d~~~~~~~~~~~~--   70 (104)
                      |...++.++++||||+|+||+++++.|+++|++|.+++|+.+..+.. ..       ........|+.+++.+.++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY   83 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc
Confidence            44455678999999999999999999999999999999986543210 00       001111138888887777664  


Q ss_pred             -cccEEEEcccCcC
Q 046878           71 -EVGVVISTVAYPQ   83 (104)
Q Consensus        71 -~~d~vv~~a~~~~   83 (104)
                       ++|++||+||...
T Consensus        84 g~id~lv~nAg~~~   97 (267)
T 3t4x_A           84 PKVDILINNLGIFE   97 (267)
T ss_dssp             CCCSEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence             7899999999753

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.40  E-value=3.2e-12  Score=80.81  Aligned_cols=79  Identities=14%  Similarity=0.181  Sum_probs=59.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc----ccc-ccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE----IHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~----~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ...    ... ...|+.|++++.++++       +
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45679999999999999999999999999999999875542110 000    111 1128888888877765       7


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|++||+||...
T Consensus       110 iD~lvnnAg~~~  121 (276)
T 3r1i_A          110 IDIAVCNAGIVS  121 (276)
T ss_dssp             CSEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999999753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.40  E-value=1.2e-12  Score=82.61  Aligned_cols=78  Identities=21%  Similarity=0.261  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc------ccccc-cccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL------EIHKE-FQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~------~~~~~-~~d~~~~~~~~~~~~------   70 (104)
                      ++.++++||||+|++|+++++.|++.|++|++++|+....+... ..      ..... ..|+.+++++.++++      
T Consensus        30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  109 (279)
T 1xg5_A           30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH  109 (279)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence            45578999999999999999999999999999999864431110 00      00111 138888888777664      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|+|||++|..
T Consensus       110 g~iD~vi~~Ag~~  122 (279)
T 1xg5_A          110 SGVDICINNAGLA  122 (279)
T ss_dssp             CCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence             689999999964

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.40  E-value=2e-12  Score=80.37  Aligned_cols=78  Identities=9%  Similarity=0.097  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHhhc-------cccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILK-------EVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv   76 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+... .........|+.|++++.++++       ++|++|
T Consensus         3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv   82 (245)
T 1uls_A            3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (245)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45679999999999999999999999999999999864431110 0111111138888888777664       489999


Q ss_pred             EcccCc
Q 046878           77 STVAYP   82 (104)
Q Consensus        77 ~~a~~~   82 (104)
                      |++|..
T Consensus        83 n~Ag~~   88 (245)
T 1uls_A           83 HYAGIT   88 (245)
T ss_dssp             ECCCCC
T ss_pred             ECCCCC
Confidence            999964

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.40  E-value=1.3e-12  Score=84.44  Aligned_cols=78  Identities=15%  Similarity=0.278  Sum_probs=56.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc--cccc--------cccccc-ccccChHHHHHhhc---
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKL--------EIHKEF-QELDEHEKIISILK---   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~--------~~~~~~-~d~~~~~~~~~~~~---   70 (104)
                      |++++++||||+|+||+++++.|+++|++|++..|+......  .+..        .....+ .|+.|++++.++++   
T Consensus         3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~   82 (324)
T 3u9l_A            3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII   82 (324)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999887432210  0000        001111 28899888887765   


Q ss_pred             ----cccEEEEcccCc
Q 046878           71 ----EVGVVISTVAYP   82 (104)
Q Consensus        71 ----~~d~vv~~a~~~   82 (104)
                          ++|++||+||..
T Consensus        83 ~~~g~iD~lVnnAG~~   98 (324)
T 3u9l_A           83 GEDGRIDVLIHNAGHM   98 (324)
T ss_dssp             HHHSCCSEEEECCCCC
T ss_pred             HHcCCCCEEEECCCcC
Confidence                789999999964

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.39  E-value=1.2e-12  Score=80.79  Aligned_cols=74  Identities=18%  Similarity=0.177  Sum_probs=56.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc---------cccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK---------EVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~---------~~d~v   75 (104)
                      |+.++++||||+|++|+++++.|+++|++|++++|+++....  ...  ....|+.+++++.++++         ++|++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~--~~~--~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD--SNI--LVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS--EEE--ECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcccccc--ccE--EEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            345689999999999999999999999999999998765421  111  11137888777766553         78999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        77 v~~Ag~~   83 (236)
T 1ooe_A           77 FCVAGGW   83 (236)
T ss_dssp             EECCCCC
T ss_pred             EECCccc
Confidence            9999953

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.39  E-value=1.3e-12  Score=82.06  Aligned_cols=82  Identities=18%  Similarity=0.245  Sum_probs=59.3

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~----   70 (104)
                      |...++.++++||||+|+||+++++.|+++|++|++++|+.+..+.. ...     .......|+.|++++.++++    
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            44556778999999999999999999999999999999986543211 000     11111128888888777664    


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|++||+||..
T Consensus        85 ~~g~id~lv~nAg~~   99 (264)
T 3ucx_A           85 AYGRVDVVINNAFRV   99 (264)
T ss_dssp             HTSCCSEEEECCCSC
T ss_pred             HcCCCcEEEECCCCC
Confidence               679999999763

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.39  E-value=6.2e-12  Score=79.19  Aligned_cols=75  Identities=13%  Similarity=0.213  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      .+.++++||||+|+||+++++.|+++|++|++++|+.....  ......  ..|+.|++++.++++       ++|++||
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--~~~~~~--~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~   87 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV--NVSDHF--KIDVTNEEEVKEAVEKTTKKYGRIDILVN   87 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT--TSSEEE--ECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc--CceeEE--EecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            45689999999999999999999999999999999875541  111111  138888887777664       6899999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      +||...
T Consensus        88 nAg~~~   93 (269)
T 3vtz_A           88 NAGIEQ   93 (269)
T ss_dssp             CCCCCC
T ss_pred             CCCcCC
Confidence            999743

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.39  E-value=1.2e-12  Score=82.03  Aligned_cols=78  Identities=14%  Similarity=0.180  Sum_probs=58.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+.. ...     ..... ..|+.|++++.++++       
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG   87 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4567999999999999999999999999999999986543211 000     01111 128888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        88 ~id~lvnnAg~~   99 (262)
T 3pk0_A           88 GIDVVCANAGVF   99 (262)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999964

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.39  E-value=1.7e-12  Score=81.75  Aligned_cols=78  Identities=15%  Similarity=0.144  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----ccccc-cccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|++.|++|++++|+....+.. ...    ..... ..|+.|++++.++++       +
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  108 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD  108 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence            4567899999999999999999999999999999986443110 000    01111 138888887777664       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus       109 iD~li~~Ag~~  119 (272)
T 1yb1_A          109 VSILVNNAGVV  119 (272)
T ss_dssp             CSEEEECCCCC
T ss_pred             CcEEEECCCcC
Confidence            89999999964

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.39  E-value=1.8e-12  Score=81.34  Aligned_cols=78  Identities=12%  Similarity=0.170  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-c-------ccccccccccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-S-------KLEIHKEFQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~-------~~~~~~~~~d~~~~~~~~~~~~------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+.. .       .........|+.|++++.++++      
T Consensus        11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   90 (267)
T 1iy8_A           11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   90 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            5567899999999999999999999999999999986543111 0       0011111138888888877764      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||+||..
T Consensus        91 g~id~lv~nAg~~  103 (267)
T 1iy8_A           91 GRIDGFFNNAGIE  103 (267)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence             679999999864

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.39  E-value=2.2e-12  Score=79.82  Aligned_cols=78  Identities=13%  Similarity=0.162  Sum_probs=54.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEE-cCCCCcccc-ccc----cccc-ccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTENSRT-SKL----EIHK-EFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~-r~~~~~~~~-~~~----~~~~-~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++ |++...+.. ...    .... ...|+.|++++.++++       
T Consensus         3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (247)
T 2hq1_A            3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4567999999999999999999999999999884 444322110 000    0011 1138888888877765       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+|||++|..
T Consensus        83 ~~d~vi~~Ag~~   94 (247)
T 2hq1_A           83 RIDILVNNAGIT   94 (247)
T ss_dssp             CCCEEEECC---
T ss_pred             CCCEEEECCCCC
Confidence            689999999874

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.38  E-value=2.2e-12  Score=77.79  Aligned_cols=63  Identities=17%  Similarity=0.286  Sum_probs=53.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc---ccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE---VGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~d~vv~~a~~~   82 (104)
                      |+++|+||+|++|+++++.|+ +|++|++++|++..           ...|+.+++++.+++++   +|+|||++|..
T Consensus         4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~~-----------~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~~   69 (202)
T 3d7l_A            4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGD-----------VTVDITNIDSIKKMYEQVGKVDAIVSATGSA   69 (202)
T ss_dssp             CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSSS-----------EECCTTCHHHHHHHHHHHCCEEEEEECCCCC
T ss_pred             cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCccc-----------eeeecCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            479999999999999999999 99999999998641           11378888888888765   89999999954

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.38  E-value=1.7e-12  Score=83.63  Aligned_cols=78  Identities=10%  Similarity=0.088  Sum_probs=58.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc---c---ccc-ccccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL---E---IHK-EFQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~---~---~~~-~~~d~~~~~~~~~~~~------   70 (104)
                      +++++++||||+|+||+++++.|+++|+.|++++|+.+..+... ..   .   ... ...|+.+++++.++++      
T Consensus         6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   85 (319)
T 3ioy_A            6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF   85 (319)
T ss_dssp             CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence            45678999999999999999999999999999999875442110 00   0   111 1138889888877764      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||+||..
T Consensus        86 g~id~lv~nAg~~   98 (319)
T 3ioy_A           86 GPVSILCNNAGVN   98 (319)
T ss_dssp             CCEEEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence             579999999964

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.38  E-value=1.6e-12  Score=80.75  Aligned_cols=78  Identities=12%  Similarity=0.216  Sum_probs=56.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc-CCCCcccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r-~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      |+.++++||||+|++|+++++.|+++|++|++++| +++..+.. ...     .......|+.|++++.++++       
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999988 43322110 000     01111138888888877764       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        82 ~id~lv~nAg~~   93 (246)
T 2uvd_A           82 QVDILVNNAGVT   93 (246)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999964

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.38  E-value=1.8e-12  Score=81.05  Aligned_cols=78  Identities=9%  Similarity=0.169  Sum_probs=57.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-c------ccccccccccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-S------KLEIHKEFQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~------~~~~~~~~~d~~~~~~~~~~~~------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++. .+.. .      .........|+.|++++.++++      
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            456789999999999999999999999999999998654 2110 0      0011111138888888777764      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||+||..
T Consensus        82 g~iD~lv~~Ag~~   94 (260)
T 1x1t_A           82 GRIDILVNNAGIQ   94 (260)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence             689999999964

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.38  E-value=1.9e-12  Score=80.92  Aligned_cols=78  Identities=17%  Similarity=0.198  Sum_probs=58.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-ccccc-cccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-EIHKE-FQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-~~~~~-~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+.... . ..... ..|+.+++++.++++       ++|+
T Consensus        10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   89 (265)
T 2o23_A           10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV   89 (265)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence            456789999999999999999999999999999998765421100 0 01111 138888888887765       7899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        90 li~~Ag~~   97 (265)
T 2o23_A           90 AVNCAGIA   97 (265)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99999864

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.38  E-value=2.2e-12  Score=80.94  Aligned_cols=78  Identities=13%  Similarity=0.174  Sum_probs=57.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccChHHHHHhhc-------cccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKIISILK-------EVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv   76 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+.... ...........|+.+++++.++++       ++|++|
T Consensus        25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv  104 (260)
T 3gem_A           25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVV  104 (260)
T ss_dssp             --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            345789999999999999999999999999999998754311 111111111138888888777664       689999


Q ss_pred             EcccCc
Q 046878           77 STVAYP   82 (104)
Q Consensus        77 ~~a~~~   82 (104)
                      |+||..
T Consensus       105 ~nAg~~  110 (260)
T 3gem_A          105 HNASEW  110 (260)
T ss_dssp             ECCCCC
T ss_pred             ECCCcc
Confidence            999964

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.38  E-value=4.6e-12  Score=78.89  Aligned_cols=69  Identities=14%  Similarity=0.093  Sum_probs=55.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc----cccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK----EVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~----~~d~vv~~a~~~~   83 (104)
                      ++++||||+|+||+++++.|+++|++|++++|++++...    .   ...|+.+++++.++++    ++|++||+||...
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----~---~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----D---LSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----C---TTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----c---cccCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            589999999999999999999999999999998755411    1   1237888888877764    4599999999754

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.38  E-value=2.2e-12  Score=82.25  Aligned_cols=78  Identities=19%  Similarity=0.210  Sum_probs=58.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----cccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ..     .....+ .|+.|++++.++++       
T Consensus        39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  118 (293)
T 3rih_A           39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG  118 (293)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999876542110 00     011111 28888887776653       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       119 ~iD~lvnnAg~~  130 (293)
T 3rih_A          119 ALDVVCANAGIF  130 (293)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            679999999974

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.38  E-value=3.1e-12  Score=81.39  Aligned_cols=78  Identities=18%  Similarity=0.144  Sum_probs=57.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc-----cccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK-----LEIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~-----~~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+....... ..     ...... ..|+.+++++.++++       
T Consensus        24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (302)
T 1w6u_A           24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  103 (302)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999986443110 00     000111 138888888877765       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       104 ~id~li~~Ag~~  115 (302)
T 1w6u_A          104 HPNIVINNAAGN  115 (302)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            459999999953

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.38  E-value=2.1e-12  Score=81.34  Aligned_cols=78  Identities=9%  Similarity=0.180  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----ccccc-cccccChHHHHHhhcc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIHKE-FQELDEHEKIISILKE-------   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~~~-~~d~~~~~~~~~~~~~-------   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+.... .    ..... ..|+.+++++.++++.       
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  111 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT  111 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            456789999999999999999999999999999998754321110 0    00111 1388888888777654       


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus       112 id~li~~Ag~~  122 (279)
T 3ctm_A          112 IDVFVANAGVT  122 (279)
T ss_dssp             CSEEEECGGGS
T ss_pred             CCEEEECCccc
Confidence            89999999854

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.38  E-value=8.8e-12  Score=79.06  Aligned_cols=80  Identities=10%  Similarity=0.238  Sum_probs=59.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--------ccc-----ccccccccccChHHHHHhhc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--------SKL-----EIHKEFQELDEHEKIISILK   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--------~~~-----~~~~~~~d~~~~~~~~~~~~   70 (104)
                      .++.++++||||+|.||+++++.|+++|++|++++|+.+..+..        ...     .......|+.|++++.++++
T Consensus         6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   85 (285)
T 3sc4_A            6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA   85 (285)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            35678999999999999999999999999999999987643211        000     00111128888888777664


Q ss_pred             -------cccEEEEcccCcC
Q 046878           71 -------EVGVVISTVAYPQ   83 (104)
Q Consensus        71 -------~~d~vv~~a~~~~   83 (104)
                             ++|++||+||...
T Consensus        86 ~~~~~~g~id~lvnnAg~~~  105 (285)
T 3sc4_A           86 KTVEQFGGIDICVNNASAIN  105 (285)
T ss_dssp             HHHHHHSCCSEEEECCCCCC
T ss_pred             HHHHHcCCCCEEEECCCCCC
Confidence                   7899999999753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.38  E-value=1.6e-12  Score=80.80  Aligned_cols=77  Identities=12%  Similarity=0.226  Sum_probs=55.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +.++++||||+|+||+++++.|+++|++|.+++++.... +.. ...     .......|+.|++++.++++       +
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999888764221 100 000     01111138888888777764       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus        83 id~lv~nAg~~   93 (246)
T 3osu_A           83 LDVLVNNAGIT   93 (246)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999975

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.37  E-value=2.3e-12  Score=80.59  Aligned_cols=79  Identities=15%  Similarity=0.256  Sum_probs=58.9

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc----ccc-ccccccChHHHHHhhc-------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE----IHK-EFQELDEHEKIISILK-------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~----~~~-~~~d~~~~~~~~~~~~-------   70 (104)
                      .|+.++++||||+|+||+++++.|+++|++|++++|+.+..+... ...    ... ...|+.|++++.++++       
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            467789999999999999999999999999999999865432110 000    111 1138888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        83 ~id~lv~nAg~~   94 (257)
T 3imf_A           83 RIDILINNAAGN   94 (257)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999953

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.37  E-value=3.3e-12  Score=80.80  Aligned_cols=78  Identities=12%  Similarity=0.170  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-cccc-ccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-EIHK-EFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-~~~~-~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+....... . .... ...|+.|++++.++++       ++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            456789999999999999999999999999999998654321110 0 0111 1138888888777664       6899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus       105 lv~nAg~~  112 (277)
T 4dqx_A          105 LVNNAGFG  112 (277)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCcC
Confidence            99999964

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.37  E-value=2.9e-12  Score=81.86  Aligned_cols=78  Identities=13%  Similarity=0.164  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ..     .......|+.|++++.++++       +
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            34578999999999999999999999999999999865442110 00     11111138888888877764       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus       109 id~lvnnAg~~  119 (301)
T 3tjr_A          109 VDVVFSNAGIV  119 (301)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCcC
Confidence            89999999974

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.37  E-value=1.9e-12  Score=81.45  Aligned_cols=79  Identities=14%  Similarity=0.169  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-cccc-cccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKE-FQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~-~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|+||+++++.|+++|+.|.+.+|+.+..+... ... .... ..|+.|++++.++++       ++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            45678999999999999999999999999999998865432110 000 1111 138888887777664       6899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||+||...
T Consensus       105 lvnnAg~~~  113 (266)
T 3grp_A          105 LVNNAGITR  113 (266)
T ss_dssp             EEECCCCC-
T ss_pred             EEECCCCCC
Confidence            999999753

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.37  E-value=2.1e-12  Score=81.21  Aligned_cols=78  Identities=21%  Similarity=0.265  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------ccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+.. ...      .......|+.+++++.++++       
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            5567899999999999999999999999999999986443110 000      11111138888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        99 ~iD~lvnnAg~~  110 (267)
T 1vl8_A           99 KLDTVVNAAGIN  110 (267)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            689999999974

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.37  E-value=5.3e-12  Score=78.79  Aligned_cols=78  Identities=15%  Similarity=0.250  Sum_probs=57.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccc-ccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHK-EFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~-~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+....... ...     .... ...|+.|++++.++++       
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   91 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG   91 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4557899999999999999999999999999999976543110 000     0011 1138888888777654       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        92 ~id~li~~Ag~~  103 (265)
T 1h5q_A           92 PISGLIANAGVS  103 (265)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            489999999974

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.37  E-value=2.8e-12  Score=79.87  Aligned_cols=78  Identities=18%  Similarity=0.204  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-ccccc-ccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKEF-QELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~~-~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|+||+++++.|+++|++|.+++|+.+..+... ... ....+ .|+.|++++.++++       ++|+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45678999999999999999999999999999999865432110 000 01111 28888888777764       6899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus        87 lv~nAg~~   94 (248)
T 3op4_A           87 LVNNAGIT   94 (248)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999975

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.36  E-value=4e-12  Score=78.34  Aligned_cols=76  Identities=18%  Similarity=0.206  Sum_probs=57.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccc-cccccChHHHHHhhc-------cc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      +++++||||+|++|+++++.|+++|++|.+++|+.+..+... ..     ..... ..|+.|++++.++++       ++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            468999999999999999999999999999999865432110 00     01111 128999998888765       68


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||+||..
T Consensus        82 d~li~~Ag~~   91 (235)
T 3l77_A           82 DVVVANAGLG   91 (235)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCccc
Confidence            9999999975

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.36  E-value=1.1e-12  Score=82.04  Aligned_cols=79  Identities=14%  Similarity=0.144  Sum_probs=55.6

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc------cccEEEE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK------EVGVVIS   77 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vv~   77 (104)
                      .++.++++||||+|+||+++++.|+++|++|++++|+.+...............|+.|++++.++++      ++|++||
T Consensus         6 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~   85 (257)
T 3tl3_A            6 EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVVN   85 (257)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEE
T ss_pred             eecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEE
Confidence            3566789999999999999999999999999999986543211000011111138888888777764      7899999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      +||..
T Consensus        86 nAg~~   90 (257)
T 3tl3_A           86 CAGTG   90 (257)
T ss_dssp             CGGGS
T ss_pred             CCCCC
Confidence            99964

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.36  E-value=9e-13  Score=82.22  Aligned_cols=82  Identities=16%  Similarity=0.223  Sum_probs=58.4

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-------cccccc-ccccChHHHHHhhc-
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-------EIHKEF-QELDEHEKIISILK-   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-------~~~~~~-~d~~~~~~~~~~~~-   70 (104)
                      |...+++++++||||+|+||+++++.|+++|++|++++|+.+..+... ..       .....+ .|+.|++++.+++. 
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            555667789999999999999999999999999999999865432110 00       111111 28888887777654 


Q ss_pred             ------cccEEEEcccCc
Q 046878           71 ------EVGVVISTVAYP   82 (104)
Q Consensus        71 ------~~d~vv~~a~~~   82 (104)
                            ++|++||+||..
T Consensus        81 ~~~~~g~iD~lvnnAg~~   98 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMF   98 (250)
T ss_dssp             HHHHHCCEEEEEECCCCC
T ss_pred             HHHhcCCCCEEEECCCcC
Confidence                  689999999974

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.36  E-value=2.6e-12  Score=81.14  Aligned_cols=78  Identities=21%  Similarity=0.265  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...     .......|+.|++++.++++       +
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   99 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP   99 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4557899999999999999999999999999999986543110 000     01111138888888777664       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus       100 iD~lv~~Ag~~  110 (277)
T 2rhc_B          100 VDVLVNNAGRP  110 (277)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999864

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.36  E-value=1.9e-12  Score=81.45  Aligned_cols=79  Identities=13%  Similarity=0.238  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ..     .......|+.|++++.++++       +
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35578999999999999999999999999999999865432110 00     11111138888887777654       6


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|++||+||...
T Consensus        82 iD~lVnnAG~~~   93 (264)
T 3tfo_A           82 IDVLVNNAGVMP   93 (264)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999999753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.36  E-value=2.6e-12  Score=79.91  Aligned_cols=77  Identities=10%  Similarity=0.141  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+... ..     .......|+.|++++.++++       +
T Consensus         7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   86 (253)
T 3qiv_A            7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG   86 (253)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45679999999999999999999999999999999865432110 00     00111128888888777764       7


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|++||+||.
T Consensus        87 id~li~~Ag~   96 (253)
T 3qiv_A           87 IDYLVNNAAI   96 (253)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            8999999987

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.36  E-value=6.5e-12  Score=79.04  Aligned_cols=74  Identities=18%  Similarity=0.155  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-------ccccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-------KEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv~   77 (104)
                      ++.++++||||+|+||+++++.|+++|++|.+++|+.......     .....|+.+.+++.+++       .++|++||
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-----LHLPGDLREAAYADGLPGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-----EECCCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-----hccCcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3557899999999999999999999999999999987654211     11123777777665554       36899999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      +||...
T Consensus       101 nAg~~~  106 (266)
T 3uxy_A          101 NAGVIS  106 (266)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            999753

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.35  E-value=3.5e-12  Score=79.72  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=56.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+.. ...     .......|+.|++++.++++       +
T Consensus        12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   91 (260)
T 2zat_A           12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG   91 (260)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4567899999999999999999999999999999986443110 000     01111138888887776654       7


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|++||++|.
T Consensus        92 iD~lv~~Ag~  101 (260)
T 2zat_A           92 VDILVSNAAV  101 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999996

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.35  E-value=4e-12  Score=79.10  Aligned_cols=79  Identities=8%  Similarity=0.207  Sum_probs=58.9

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-cccccc-ccccChHHHHHhhc-------ccc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHKEF-QELDEHEKIISILK-------EVG   73 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~~~-~d~~~~~~~~~~~~-------~~d   73 (104)
                      .++.++++||||+|+||+++++.|+++|++|.+++|+.+..+... .. .....+ .|+.|++++.++++       ++|
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   82 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID   82 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence            356789999999999999999999999999999998865432110 00 011111 38888888777764       689


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||+||..
T Consensus        83 ~lv~nAg~~   91 (247)
T 3rwb_A           83 ILVNNASIV   91 (247)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999974

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.35  E-value=5.6e-12  Score=78.54  Aligned_cols=75  Identities=15%  Similarity=0.225  Sum_probs=53.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccc-cChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQEL-DEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~-~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+...  ..... .|+ .+.+.+.+.+.++|++||+||..
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~--~~~~~-~D~~~~~~~~~~~~~~iD~lv~~Ag~~   92 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSG--HRYVV-CDLRKDLDLLFEKVKEVDILVLNAGGP   92 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTC--SEEEE-CCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhC--CeEEE-eeHHHHHHHHHHHhcCCCEEEECCCCC
Confidence            56689999999999999999999999999999999863221110  11111 345 23444545555899999999864

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.35  E-value=4.8e-12  Score=79.05  Aligned_cols=78  Identities=13%  Similarity=0.203  Sum_probs=58.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c-cccc-ccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L-EIHK-EFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~-~~~~-~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+.... . .... ...|+.+++++.++++       ++|+
T Consensus         7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~   86 (261)
T 3n74_A            7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI   86 (261)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence            556799999999999999999999999999999998755421110 0 0111 1138888887777664       6799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus        87 li~~Ag~~   94 (261)
T 3n74_A           87 LVNNAGIG   94 (261)
T ss_dssp             EEECCCCC
T ss_pred             EEECCccC
Confidence            99999964

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.35  E-value=4.7e-12  Score=80.20  Aligned_cols=78  Identities=9%  Similarity=0.167  Sum_probs=56.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-ccc-----cccc-ccccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKL-----EIHK-EFQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~-----~~~~-~~~d~~~~~~~~~~~~------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+... .+.. ...     .... ...|+.|++++.++++      
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  102 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF  102 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence            556789999999999999999999999999999985422 1100 000     0111 1138888888777664      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||+||..
T Consensus       103 g~iD~lv~nAg~~  115 (281)
T 3v2h_A          103 GGADILVNNAGVQ  115 (281)
T ss_dssp             SSCSEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence             689999999974

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.35  E-value=1.1e-11  Score=77.92  Aligned_cols=83  Identities=12%  Similarity=0.153  Sum_probs=62.5

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhh------
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISIL------   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~------   69 (104)
                      |+..++.++++||||++.||+++++.|.++|..|.+.+|+.+.....+..     .......|+.+++++.+++      
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~   80 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIAT   80 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHH
Confidence            77788899999999999999999999999999999999987654211111     0111112888887776654      


Q ss_pred             -ccccEEEEcccCcC
Q 046878           70 -KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 -~~~d~vv~~a~~~~   83 (104)
                       .+.|++||+||...
T Consensus        81 ~G~iDiLVNnAGi~~   95 (258)
T 4gkb_A           81 FGRLDGLVNNAGVND   95 (258)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             hCCCCEEEECCCCCC
Confidence             46899999999743

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.35  E-value=2.8e-11  Score=76.31  Aligned_cols=79  Identities=10%  Similarity=0.199  Sum_probs=58.9

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc------------ccccccccccChHHHHHhhc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL------------EIHKEFQELDEHEKIISILK   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~------------~~~~~~~d~~~~~~~~~~~~   70 (104)
                      .++.++++||||+|.||+++++.|+++|++|++++|+....+... ..            .......|+.|++++.++++
T Consensus         3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   82 (274)
T 3e03_A            3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA   82 (274)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence            456789999999999999999999999999999999876532110 00            00011128888887777654


Q ss_pred             -------cccEEEEcccCc
Q 046878           71 -------EVGVVISTVAYP   82 (104)
Q Consensus        71 -------~~d~vv~~a~~~   82 (104)
                             ++|++||+||..
T Consensus        83 ~~~~~~g~iD~lvnnAG~~  101 (274)
T 3e03_A           83 ATVDTFGGIDILVNNASAI  101 (274)
T ss_dssp             HHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHcCCCCEEEECCCcc
Confidence                   689999999974

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.35  E-value=1.9e-12  Score=80.02  Aligned_cols=75  Identities=12%  Similarity=0.144  Sum_probs=54.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-cc-----ccccc-ccccccChHHHHHhh-------ccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SK-----LEIHK-EFQELDEHEKIISIL-------KEV   72 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~-----~~~~~-~~~d~~~~~~~~~~~-------~~~   72 (104)
                      ++++||||+|++|+++++.|+++|++|+++ +|+++..+.. ..     ..... ...|+.+++++.+++       .++
T Consensus         2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   81 (245)
T 2ph3_A            2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL   81 (245)
T ss_dssp             CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence            589999999999999999999999999988 6664432110 00     01111 113888888777765       378


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        82 d~li~~Ag~~   91 (245)
T 2ph3_A           82 DTLVNNAGIT   91 (245)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.35  E-value=2e-12  Score=81.53  Aligned_cols=78  Identities=10%  Similarity=0.159  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-------cccc-ccccccChHHHHHhhc-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-------EIHK-EFQELDEHEKIISILK-----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-------~~~~-~~~d~~~~~~~~~~~~-----   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...       .... ...|+.|++++.++++     
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            5567899999999999999999999999999999986443110 000       0011 1138889888877765     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        ++|++||++|..
T Consensus        84 ~g~id~lv~~Ag~~   97 (278)
T 1spx_A           84 FGKLDILVNNAGAA   97 (278)
T ss_dssp             HSCCCEEEECCC--
T ss_pred             cCCCCEEEECCCCC
Confidence              789999999864

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.35  E-value=2.5e-12  Score=80.45  Aligned_cols=78  Identities=18%  Similarity=0.177  Sum_probs=57.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC---CeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~~------   70 (104)
                      +++++++||||+|++|+++++.|++.|   ++|++++|+....+.....    ..... ..|+.+++++.+++.      
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            456789999999999999999999999   9999999987654211111    01111 128888887777665      


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|++||++|..
T Consensus        99 g~~~id~li~~Ag~~  113 (267)
T 1sny_A           99 KDQGLNVLFNNAGIA  113 (267)
T ss_dssp             GGGCCSEEEECCCCC
T ss_pred             CCCCccEEEECCCcC
Confidence               699999999964

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.35  E-value=4.9e-12  Score=79.45  Aligned_cols=78  Identities=10%  Similarity=0.123  Sum_probs=58.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-cccc-ccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-EIHK-EFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-~~~~-~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+.. ... .... ...|+.|++++.++++       ++|+
T Consensus         4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~   83 (263)
T 2a4k_A            4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   83 (263)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcE
Confidence            5667999999999999999999999999999999986543111 001 0111 1138888888777664       4699


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        84 lvnnAg~~   91 (263)
T 2a4k_A           84 VAHFAGVA   91 (263)
T ss_dssp             EEEGGGGT
T ss_pred             EEECCCCC
Confidence            99999964

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.35  E-value=3.3e-12  Score=79.86  Aligned_cols=78  Identities=8%  Similarity=0.115  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----cccc-ccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----EIHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ..    .... ...|+.|++++.++++       +
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            55679999999999999999999999999999999865432110 00    0111 1138888887777664       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus        90 id~lv~nAg~~  100 (256)
T 3gaf_A           90 ITVLVNNAGGG  100 (256)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999974

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.35  E-value=3.9e-12  Score=79.69  Aligned_cols=82  Identities=9%  Similarity=0.065  Sum_probs=59.8

Q ss_pred             CCCCCCCCeEEEEccCCh--hhHHHHHHHHhCCCeEEEEEcCCCCccccccc----c--cccc-cccccChHHHHHhhc-
Q 046878            1 MEGENTKPKILIFGGTGY--LGKYMVKASVSSGHNTFVYARPVTENSRTSKL----E--IHKE-FQELDEHEKIISILK-   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~--iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~--~~~~-~~d~~~~~~~~~~~~-   70 (104)
                      |...++.++++||||+|+  +|+++++.|+++|++|.+++|+....+.....    .  .... ..|+.|++++.++++ 
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            666677889999999987  99999999999999999998875332111110    0  1111 128888887777654 


Q ss_pred             ------cccEEEEcccCc
Q 046878           71 ------EVGVVISTVAYP   82 (104)
Q Consensus        71 ------~~d~vv~~a~~~   82 (104)
                            .+|++||++|..
T Consensus        81 ~~~~~g~id~li~~Ag~~   98 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFA   98 (266)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHhCCeeEEEEccccc
Confidence                  679999999864

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.35  E-value=4.9e-12  Score=77.93  Aligned_cols=69  Identities=17%  Similarity=0.161  Sum_probs=56.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc------cccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK------EVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------~~d~vv~~a~~   81 (104)
                      ++++||||+|++|+++++.|+++|++|++++|++. .   .....  ...|+.+++++.++++      ++|++||++|.
T Consensus         3 k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---~~~~~--~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~   76 (242)
T 1uay_A            3 RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---EDLIY--VEGDVTREEDVRRAVARAQEEAPLFAVVSAAGV   76 (242)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---SSSEE--EECCTTCHHHHHHHHHHHHHHSCEEEEEECCCC
T ss_pred             CEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---cceEE--EeCCCCCHHHHHHHHHHHHhhCCceEEEEcccc
Confidence            68999999999999999999999999999999875 2   11111  1138888888888776      78999999986


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus        77 ~   77 (242)
T 1uay_A           77 G   77 (242)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.35  E-value=4.6e-12  Score=80.25  Aligned_cols=78  Identities=13%  Similarity=0.230  Sum_probs=56.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...     .......|+.|++++.++++       +
T Consensus        42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~  121 (285)
T 2c07_A           42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN  121 (285)
T ss_dssp             CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4557899999999999999999999999999988775433110 000     10111138888888877763       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||+||..
T Consensus       122 id~li~~Ag~~  132 (285)
T 2c07_A          122 VDILVNNAGIT  132 (285)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999964

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.35  E-value=3.7e-11  Score=74.82  Aligned_cols=79  Identities=10%  Similarity=0.245  Sum_probs=60.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh---ccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL---KEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~vv~~a~~   81 (104)
                      .+.++++|||+++.||+++++.|.++|.+|.+.+|+.+...............|+.|++++++++   .+.|++||+||.
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi   88 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI   88 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            36789999999999999999999999999999999877653222211112123888888777765   568999999997


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      ..
T Consensus        89 ~~   90 (242)
T 4b79_A           89 SR   90 (242)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.35  E-value=2.3e-12  Score=80.31  Aligned_cols=78  Identities=12%  Similarity=0.205  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc----ccccc-cccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL----EIHKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~----~~~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+....+.. ...    ..... ..|+.|++++.++++       +
T Consensus        11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   90 (260)
T 3awd_A           11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR   90 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4557899999999999999999999999999999986433110 000    00111 138888888877764       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus        91 id~vi~~Ag~~  101 (260)
T 3awd_A           91 VDILVACAGIC  101 (260)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999853

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.34  E-value=3.6e-12  Score=80.53  Aligned_cols=78  Identities=14%  Similarity=0.276  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---ccccc-cccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---EIHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ...   ..... ..|+.|++++.++++       ++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL  106 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            3557899999999999999999999999999999886443110 000   01111 138888888777664       68


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||+||..
T Consensus       107 D~lvnnAg~~  116 (276)
T 2b4q_A          107 DILVNNAGTS  116 (276)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999964

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.34  E-value=5.1e-12  Score=77.70  Aligned_cols=75  Identities=19%  Similarity=0.289  Sum_probs=56.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-ccccc-cccccChHHHHHhhccc----cEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHKE-FQELDEHEKIISILKEV----GVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~~-~~d~~~~~~~~~~~~~~----d~vv~~a~   80 (104)
                      ++++||||+|++|+++++.|+++|++|++++|+.+..+... .. ..... ..|+.+++++.++++.+    |++||++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag   81 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAG   81 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCC
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCC
Confidence            57999999999999999999999999999999875442111 00 11111 13899999888887654    99999999


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        82 ~~   83 (230)
T 3guy_A           82 SG   83 (230)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.34  E-value=8.9e-12  Score=77.61  Aligned_cols=78  Identities=13%  Similarity=0.119  Sum_probs=55.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCccccccc------ccccc-cccccCh-HHHHHhhc-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRTSKL------EIHKE-FQELDEH-EKIISILK-----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~~~~------~~~~~-~~d~~~~-~~~~~~~~-----   70 (104)
                      ++.++++||||+|++|+++++.|+++|++ |.+++|+.... .....      ..... ..|+.|+ +++.++++     
T Consensus         3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~-~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPT-ALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHH-HHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHH-HHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            56679999999999999999999999996 88888876321 01100      00111 1288887 76666554     


Q ss_pred             --cccEEEEcccCcC
Q 046878           71 --EVGVVISTVAYPQ   83 (104)
Q Consensus        71 --~~d~vv~~a~~~~   83 (104)
                        ++|++||+||...
T Consensus        82 ~g~id~lv~~Ag~~~   96 (254)
T 1sby_A           82 LKTVDILINGAGILD   96 (254)
T ss_dssp             HSCCCEEEECCCCCC
T ss_pred             cCCCCEEEECCccCC
Confidence              6899999999753

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.34  E-value=3.6e-12  Score=79.03  Aligned_cols=78  Identities=12%  Similarity=0.181  Sum_probs=58.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----cccccc-ccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----EIHKEF-QELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----~~~~~~-~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+....+.... .    .....+ .|+.|++++.++++       +
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (247)
T 3lyl_A            3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA   82 (247)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            456799999999999999999999999999999998654321100 0    011111 28888888777664       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus        83 id~li~~Ag~~   93 (247)
T 3lyl_A           83 IDILVNNAGIT   93 (247)
T ss_dssp             CSEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            79999999975

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.34  E-value=4.9e-12  Score=79.26  Aligned_cols=78  Identities=10%  Similarity=0.122  Sum_probs=56.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC-CCCcccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP-VTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~-~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+ +...+.. ...     .......|+.|++++.++++       
T Consensus        19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   98 (274)
T 1ja9_A           19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   98 (274)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            456789999999999999999999999999999984 3222100 000     00111138888888877765       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+|||++|..
T Consensus        99 ~~d~vi~~Ag~~  110 (274)
T 1ja9_A           99 GLDFVMSNSGME  110 (274)
T ss_dssp             CEEEEECCCCCC
T ss_pred             CCCEEEECCCCC
Confidence            789999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.33  E-value=3.5e-11  Score=76.18  Aligned_cols=82  Identities=6%  Similarity=0.094  Sum_probs=58.4

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc-------------cccc----c----ccccc-ccc
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS-------------RTSK----L----EIHKE-FQE   58 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~-------------~~~~----~----~~~~~-~~d   58 (104)
                      |...++.++++||||+|.||+++++.|+++|++|++++|+.+...             ....    .    ..... ..|
T Consensus         5 m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   84 (286)
T 3uve_A            5 MTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD   84 (286)
T ss_dssp             -CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             CCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC
Confidence            444566789999999999999999999999999999998743210             0000    0    00111 128


Q ss_pred             ccChHHHHHhhc-------cccEEEEcccCc
Q 046878           59 LDEHEKIISILK-------EVGVVISTVAYP   82 (104)
Q Consensus        59 ~~~~~~~~~~~~-------~~d~vv~~a~~~   82 (104)
                      +.|++++.++++       ++|++||+||..
T Consensus        85 v~~~~~v~~~~~~~~~~~g~id~lv~nAg~~  115 (286)
T 3uve_A           85 VRDYDALKAAVDSGVEQLGRLDIIVANAGIG  115 (286)
T ss_dssp             TTCHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             CCCHHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence            888888777664       689999999963

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.33  E-value=8.5e-12  Score=78.61  Aligned_cols=78  Identities=13%  Similarity=0.216  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc-----cccccccccccChHHHHHhh--------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK-----LEIHKEFQELDEHEKIISIL--------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~-----~~~~~~~~d~~~~~~~~~~~--------~   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+.. ..     ........|+.|++++.+++        .
T Consensus        19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   98 (273)
T 1ae1_A           19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG   98 (273)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred             CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4557899999999999999999999999999999986443110 00     01111113888888777765        5


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        99 ~id~lv~nAg~~  110 (273)
T 1ae1_A           99 KLNILVNNAGVV  110 (273)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCcEEEECCCCC
Confidence            689999999974

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.33  E-value=4.8e-12  Score=80.04  Aligned_cols=79  Identities=10%  Similarity=0.238  Sum_probs=56.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +++++++||||+|+||+++++.|+++|++|++++|+.+..+.. ...     .......|+.|++++.++++       +
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            3457899999999999999999999999999999986543211 000     11111128888887777654       6


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|++||+||...
T Consensus       102 id~lv~nAg~~~  113 (279)
T 3sju_A          102 IGILVNSAGRNG  113 (279)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CcEEEECCCCCC
Confidence            799999999753

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.33  E-value=4e-12  Score=78.82  Aligned_cols=76  Identities=7%  Similarity=0.104  Sum_probs=56.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----cccc-ccccccChHHHHHhhc-------cc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHK-EFQELDEHEKIISILK-------EV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~-~~~d~~~~~~~~~~~~-------~~   72 (104)
                      +++++||||+|++|+++++.|+++|++|++++|+++..+... ..     .... ...|+.|++++.++++       ++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            368999999999999999999999999999999864431100 00     0011 1138888888877765       78


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |+|||++|..
T Consensus        82 d~li~~Ag~~   91 (250)
T 2cfc_A           82 DVLVNNAGIT   91 (250)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999863

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.33  E-value=2.6e-12  Score=80.76  Aligned_cols=78  Identities=13%  Similarity=0.239  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---cccc-cccccChHHHHHhhc-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHKE-FQELDEHEKIISILK-------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~~-~~d~~~~~~~~~~~~-------~~   72 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+....... ....   .... ..|+.|++++.++++       ++
T Consensus        14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   93 (278)
T 2bgk_A           14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   93 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4567899999999999999999999999999998875432110 0000   1111 138888888877765       68


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        94 d~li~~Ag~~  103 (278)
T 2bgk_A           94 DIMFGNVGVL  103 (278)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCccc
Confidence            9999999864

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.33  E-value=6e-12  Score=79.41  Aligned_cols=83  Identities=10%  Similarity=0.177  Sum_probs=57.7

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc----------ccccc----c-----ccccccccccC
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN----------SRTSK----L-----EIHKEFQELDE   61 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~----------~~~~~----~-----~~~~~~~d~~~   61 (104)
                      |...++.++++||||+|+||+++++.|+++|++|.+++|+....          +....    .     .......|+.|
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            44456678999999999999999999999999999998853211          00000    0     00011128888


Q ss_pred             hHHHHHhhc-------cccEEEEcccCcC
Q 046878           62 HEKIISILK-------EVGVVISTVAYPQ   83 (104)
Q Consensus        62 ~~~~~~~~~-------~~d~vv~~a~~~~   83 (104)
                      ++++.++++       .+|++||+||...
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~  113 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAA  113 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            888777664       5899999999753

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.33  E-value=5.1e-13  Score=80.72  Aligned_cols=73  Identities=16%  Similarity=0.256  Sum_probs=54.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHhhc---cccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILK---EVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~---~~d~vv~~a~~~   82 (104)
                      ++++|+||+|++|+++++.|+++  +|++++|++...+... .........|+.|++++.++++   ++|+|||++|..
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~   77 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGARALPADLADELEAKALLEEAGPLDLLVHAVGKA   77 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTCEECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccCcEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence            47999999999999999999988  8999998764431110 0100111138999999988887   899999999864

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.32  E-value=3.8e-12  Score=80.43  Aligned_cols=78  Identities=10%  Similarity=0.180  Sum_probs=57.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----ccccc-cccccChHHHHHhhc------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----EIHKE-FQELDEHEKIISILK------EV   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~~~~~-~~d~~~~~~~~~~~~------~~   72 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+...... ..    ..... ..|+.+++++.+++.      ++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            45678999999999999999999999999999999876542211 00    00111 127888777766654      68


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||+||..
T Consensus       111 D~lvnnAg~~  120 (275)
T 4imr_A          111 DILVINASAQ  120 (275)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999964

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.32  E-value=4.6e-12  Score=79.35  Aligned_cols=77  Identities=13%  Similarity=0.179  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----cccc-ccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----EIHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+... ..    .... ...|+.+++++.+++.       .
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            45578999999999999999999999999999999865432110 00    0111 1128888888777664       5


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|++||++|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            8999999997

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.32  E-value=2.5e-12  Score=81.12  Aligned_cols=78  Identities=13%  Similarity=0.250  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+.. ...     .......|+.|++++.++++       +
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            4567999999999999999999999999999999876543211 000     11111128888888877765       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus       104 iD~lv~nAg~~  114 (271)
T 4ibo_A          104 VDILVNNAGIQ  114 (271)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999975

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.32  E-value=5.6e-12  Score=79.78  Aligned_cols=79  Identities=9%  Similarity=0.138  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-ccccc-cccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHKE-FQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~~-~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... .. ..... ..|+.|++++.++++       ++|+
T Consensus        27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  106 (277)
T 3gvc_A           27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDK  106 (277)
T ss_dssp             CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45678999999999999999999999999999999865432110 00 01111 128888887776654       6899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||+||...
T Consensus       107 lvnnAg~~~  115 (277)
T 3gvc_A          107 LVANAGVVH  115 (277)
T ss_dssp             EEECCCCCC
T ss_pred             EEECCCCCC
Confidence            999999743

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.32  E-value=4.9e-12  Score=79.85  Aligned_cols=77  Identities=12%  Similarity=0.185  Sum_probs=57.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-ccccc-cccccChHHHHHhhc-------cccEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHKE-FQELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~~-~~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      ++++++||||+|+||+++++.|+++|++|.+++|+.+..+... .. ..... ..|+.|++++.++++       ++|++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  106 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL  106 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4568999999999999999999999999999999865432110 00 01111 128888888877764       78999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||+||..
T Consensus       107 VnnAg~~  113 (272)
T 4dyv_A          107 FNNAGTG  113 (272)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999974

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.32  E-value=4.5e-11  Score=77.85  Aligned_cols=78  Identities=10%  Similarity=0.235  Sum_probs=58.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc--------cc-----ccccccccccChHHHHHhhc-
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS--------KL-----EIHKEFQELDEHEKIISILK-   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~--------~~-----~~~~~~~d~~~~~~~~~~~~-   70 (104)
                      ++.++++||||+|.||.++++.|+++|++|++++|+.+..+...        ..     .......|+.|++++.++++ 
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~  122 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEK  122 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            45678999999999999999999999999999999876532110        00     00111128888888777764 


Q ss_pred             ------cccEEEEcccCc
Q 046878           71 ------EVGVVISTVAYP   82 (104)
Q Consensus        71 ------~~d~vv~~a~~~   82 (104)
                            ++|++||+||..
T Consensus       123 ~~~~~g~iDilVnnAG~~  140 (346)
T 3kvo_A          123 AIKKFGGIDILVNNASAI  140 (346)
T ss_dssp             HHHHHSCCCEEEECCCCC
T ss_pred             HHHHcCCCCEEEECCCCC
Confidence                  789999999964

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=99.32  E-value=5e-12  Score=82.77  Aligned_cols=85  Identities=16%  Similarity=0.278  Sum_probs=65.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc-ccccChHHHHHhhccccEEEEcccCcChh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      +|||+|+|| |++|+.+++.|.+ .++|.+.+++..+.+...  .....+ .|..|.+++.++++++|+|++++|+..  
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~--~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~--   89 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK--EFATPLKVDASNFDKLVEVMKEFELVIGALPGFL--   89 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT--TTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGG--
T ss_pred             ccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh--ccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcc--
Confidence            468999998 9999999998865 578999998765542111  111212 278899999999999999999998752  


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                       ...++++|.+++
T Consensus        90 -~~~v~~~~~~~g  101 (365)
T 3abi_A           90 -GFKSIKAAIKSK  101 (365)
T ss_dssp             -HHHHHHHHHHHT
T ss_pred             -cchHHHHHHhcC
Confidence             468899999887

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.32  E-value=3.8e-12  Score=80.17  Aligned_cols=78  Identities=13%  Similarity=0.233  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccc-cccccChHHHHHhhc-------cccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKE-FQELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~-~~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+... ....... ..|+.|++++.++++       ++|++
T Consensus         7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l   86 (270)
T 1yde_A            7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   86 (270)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            55678999999999999999999999999999999864431110 0111111 138888888877664       68999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||++|..
T Consensus        87 v~nAg~~   93 (270)
T 1yde_A           87 VNNAGHH   93 (270)
T ss_dssp             EECCCCC
T ss_pred             EECCCCC
Confidence            9999863

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.32  E-value=2.9e-11  Score=75.35  Aligned_cols=69  Identities=25%  Similarity=0.272  Sum_probs=54.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-------cccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-------EVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------~~d~vv~~a   79 (104)
                      +++++||||+|++|+++++.|+++|++|++++|+......   .   ....|+.|.+++.++++       ++|++||+|
T Consensus        22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~---~---~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A   95 (251)
T 3orf_A           22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD---H---SFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA   95 (251)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS---E---EEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc---c---ceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            4689999999999999999999999999999998765421   1   11125777777766654       469999999


Q ss_pred             cC
Q 046878           80 AY   81 (104)
Q Consensus        80 ~~   81 (104)
                      |.
T Consensus        96 g~   97 (251)
T 3orf_A           96 GG   97 (251)
T ss_dssp             CC
T ss_pred             cc
Confidence            96

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.32  E-value=5.7e-12  Score=78.24  Aligned_cols=78  Identities=13%  Similarity=0.194  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc--ccccccccccChHHHHHhhc---cccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL--EIHKEFQELDEHEKIISILK---EVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~--~~~~~~~d~~~~~~~~~~~~---~~d~vv~~   78 (104)
                      .+.++++||||+|++|+++++.|+++|++|++++|+.+..+... ..  .......|+.+.+++.++++   ++|++||+
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            35679999999999999999999999999999999865432110 00  11111238888888887775   68999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      ||..
T Consensus        92 Ag~~   95 (249)
T 3f9i_A           92 AGIT   95 (249)
T ss_dssp             CC--
T ss_pred             CCCC
Confidence            9964

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.32  E-value=1.1e-11  Score=78.84  Aligned_cols=78  Identities=17%  Similarity=0.227  Sum_probs=57.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--c---c--cccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--S---K--LEIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--~---~--~~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|.+++|+.......  .   .  ........|+.|++++.++++       
T Consensus        45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  124 (291)
T 3ijr_A           45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG  124 (291)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4567999999999999999999999999999999986432110  0   0  011111128888887777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       125 ~iD~lvnnAg~~  136 (291)
T 3ijr_A          125 SLNILVNNVAQQ  136 (291)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEEEECCCCc
Confidence            689999999864

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.32  E-value=1e-11  Score=77.49  Aligned_cols=75  Identities=11%  Similarity=0.181  Sum_probs=56.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------cccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++++||||+|++|+++++.|+++|++|++++|+++..+.. ...     .......|+.|++++.++++       ++|+
T Consensus         3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~   82 (256)
T 1geg_A            3 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   82 (256)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            5899999999999999999999999999999986443111 000     01111138889888877765       7899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||++|..
T Consensus        83 lv~nAg~~   90 (256)
T 1geg_A           83 IVNNAGVA   90 (256)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999864

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.31  E-value=9.8e-12  Score=78.54  Aligned_cols=79  Identities=8%  Similarity=0.109  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc----------cccc----c-----ccccccccccChHHH
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS----------RTSK----L-----EIHKEFQELDEHEKI   65 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~----------~~~~----~-----~~~~~~~d~~~~~~~   65 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+...          ....    .     .......|+.|++++
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            45678999999999999999999999999999998532110          0000    0     000111288888887


Q ss_pred             HHhhc-------cccEEEEcccCcC
Q 046878           66 ISILK-------EVGVVISTVAYPQ   83 (104)
Q Consensus        66 ~~~~~-------~~d~vv~~a~~~~   83 (104)
                      .++++       ++|++||+||...
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~~~  117 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGVLS  117 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC
Confidence            77764       6899999999753

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.31  E-value=3.3e-11  Score=76.13  Aligned_cols=79  Identities=13%  Similarity=0.188  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc---------cccc----c----ccccc-cccccChHHHH
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS---------RTSK----L----EIHKE-FQELDEHEKII   66 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~---------~~~~----~----~~~~~-~~d~~~~~~~~   66 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|++....         ....    .    ..... ..|+.|++++.
T Consensus         8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   87 (281)
T 3s55_A            8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALE   87 (281)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            45679999999999999999999999999999999743210         0000    0    00111 12888888877


Q ss_pred             Hhhc-------cccEEEEcccCcC
Q 046878           67 SILK-------EVGVVISTVAYPQ   83 (104)
Q Consensus        67 ~~~~-------~~d~vv~~a~~~~   83 (104)
                      ++++       ++|++||+||...
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~  111 (281)
T 3s55_A           88 SFVAEAEDTLGGIDIAITNAGIST  111 (281)
T ss_dssp             HHHHHHHHHHTCCCEEEECCCCCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCC
Confidence            7764       6899999999743

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.31  E-value=7e-12  Score=78.88  Aligned_cols=78  Identities=17%  Similarity=0.221  Sum_probs=56.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--cccc----cccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--SKLE----IHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--~~~~----~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.......  ....    .... ..|+.+++++.++++       
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4557899999999999999999999999999999965432110  0000    0111 128888887777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       107 ~id~li~nAg~~  118 (271)
T 4iin_A          107 GLSYLVNNAGVV  118 (271)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            689999999974

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.31  E-value=1.8e-11  Score=76.80  Aligned_cols=79  Identities=11%  Similarity=0.167  Sum_probs=58.4

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----c--cccccccccChHHHHHhhc-----
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----E--IHKEFQELDEHEKIISILK-----   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~--~~~~~~d~~~~~~~~~~~~-----   70 (104)
                      .++.++++||||+|.||+++++.|+++|++|++++|+.+..+.. ...     .  ......|+.|++++.++++     
T Consensus         5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (265)
T 3lf2_A            5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT   84 (265)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            46678999999999999999999999999999999986543211 000     0  1111138888887776653     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        ++|++||+||..
T Consensus        85 ~g~id~lvnnAg~~   98 (265)
T 3lf2_A           85 LGCASILVNNAGQG   98 (265)
T ss_dssp             HCSCSEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence              679999999974

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.31  E-value=2.3e-12  Score=80.58  Aligned_cols=77  Identities=17%  Similarity=0.244  Sum_probs=57.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHh-CCCeEEEEEcCCCCcccc-ccc----cccc-ccccccChHHHHHhhc-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTENSRT-SKL----EIHK-EFQELDEHEKIISILK-------E   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~~r~~~~~~~~-~~~----~~~~-~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++++++||||+|++|+++++.|++ .|++|++++|+....+.. ...    .... ...|+.+.+++.++++       +
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999 899999999986433110 000    0111 1138888888877765       7


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||+||..
T Consensus        83 id~li~~Ag~~   93 (276)
T 1wma_A           83 LDVLVNNAGIA   93 (276)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCccc
Confidence            89999999865

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.31  E-value=8.1e-12  Score=79.20  Aligned_cols=77  Identities=14%  Similarity=0.220  Sum_probs=56.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------cc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------EV   72 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~~   72 (104)
                      +.++++||||+|+||+++++.|+++|++|.+++|+.+..+.. ...     .......|+.|++++.+++.       ++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (283)
T 3v8b_A           27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL  106 (283)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            456899999999999999999999999999999986543211 000     00111128888887777664       68


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||+||..
T Consensus       107 D~lVnnAg~~  116 (283)
T 3v8b_A          107 DIVVANAGIN  116 (283)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999963

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.31  E-value=8.7e-12  Score=78.46  Aligned_cols=80  Identities=11%  Similarity=0.150  Sum_probs=57.3

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~------   70 (104)
                      .++.++++||||+|+||+++++.|+++|++|.+++++.... +.. ...     .......|+.|++++.++++      
T Consensus        15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   94 (270)
T 3is3_A           15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF   94 (270)
T ss_dssp             CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35668999999999999999999999999999887764332 100 000     01111128888888777664      


Q ss_pred             -cccEEEEcccCcC
Q 046878           71 -EVGVVISTVAYPQ   83 (104)
Q Consensus        71 -~~d~vv~~a~~~~   83 (104)
                       ++|++||+||...
T Consensus        95 g~id~lvnnAg~~~  108 (270)
T 3is3_A           95 GHLDIAVSNSGVVS  108 (270)
T ss_dssp             SCCCEEECCCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence             6799999999753

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.31  E-value=7.4e-12  Score=78.66  Aligned_cols=79  Identities=18%  Similarity=0.242  Sum_probs=57.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+.. ...     .....+ .|+.|++++.++++       
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4557899999999999999999999999999999986543211 000     011111 28888777766653       


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ++|++||+||...
T Consensus        98 ~id~lv~nAg~~~  110 (266)
T 4egf_A           98 GLDVLVNNAGISH  110 (266)
T ss_dssp             SCSEEEEECCCCC
T ss_pred             CCCEEEECCCcCC
Confidence            7899999999753

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.31  E-value=1.4e-11  Score=77.62  Aligned_cols=78  Identities=12%  Similarity=0.141  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc-----ccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|+.|.+++++.... +. ....     .......|+.|++++.++++       
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999887765321 10 0000     01111128888888777764       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       109 ~iD~lvnnAg~~  120 (271)
T 3v2g_A          109 GLDILVNSAGIW  120 (271)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCcEEEECCCCC
Confidence            789999999974

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.31  E-value=3.1e-12  Score=80.84  Aligned_cols=78  Identities=12%  Similarity=0.204  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---c----cccc-cccccChHHHHHhhc-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---E----IHKE-FQELDEHEKIISILK-----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~----~~~~-~~d~~~~~~~~~~~~-----   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.+..+.. ...   .    .... ..|+.|++++.++++     
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   83 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence            5667999999999999999999999999999999986543211 000   0    1111 138888888777664     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        ++|++||+||..
T Consensus        84 ~g~iD~lv~nAg~~   97 (280)
T 1xkq_A           84 FGKIDVLVNNAGAA   97 (280)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence              689999999864

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.31  E-value=8.2e-12  Score=78.64  Aligned_cols=78  Identities=10%  Similarity=0.196  Sum_probs=56.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|.+++|+.... +.. ...     .......|+.|++++.++++       
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999988854322 100 000     11111138888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       106 ~id~lv~nAg~~  117 (269)
T 4dmm_A          106 RLDVLVNNAGIT  117 (269)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            689999999975

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.30  E-value=9.5e-12  Score=77.79  Aligned_cols=79  Identities=14%  Similarity=0.223  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-ccccc-cccccChHHHHHhh-------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHKE-FQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~~-~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ++.++++||||+|+||+++++.|+++|++|.+++|+.+..+... .. ..... ..|+.|++++.+++       .++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            56689999999999999999999999999999999865432111 00 01111 12888888776654       36899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||+||...
T Consensus        86 lv~nAg~~~   94 (255)
T 4eso_A           86 LHINAGVSE   94 (255)
T ss_dssp             EEECCCCCC
T ss_pred             EEECCCCCC
Confidence            999999753

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.30  E-value=1.2e-11  Score=78.82  Aligned_cols=82  Identities=11%  Similarity=0.176  Sum_probs=58.4

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc---------ccc----cc-----ccccccccccCh
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS---------RTS----KL-----EIHKEFQELDEH   62 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~---------~~~----~~-----~~~~~~~d~~~~   62 (104)
                      |...++.++++||||+|.||+++++.|++.|++|++++|++....         ...    ..     .......|+.|+
T Consensus        22 m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~  101 (299)
T 3t7c_A           22 MAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDF  101 (299)
T ss_dssp             CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCH
Confidence            444466789999999999999999999999999999998742110         000    00     000111288888


Q ss_pred             HHHHHhhc-------cccEEEEcccCc
Q 046878           63 EKIISILK-------EVGVVISTVAYP   82 (104)
Q Consensus        63 ~~~~~~~~-------~~d~vv~~a~~~   82 (104)
                      +++.++++       ++|++||+||..
T Consensus       102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~  128 (299)
T 3t7c_A          102 DAMQAAVDDGVTQLGRLDIVLANAALA  128 (299)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence            88777664       689999999964

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.30  E-value=1.7e-11  Score=77.35  Aligned_cols=79  Identities=10%  Similarity=0.217  Sum_probs=55.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhh------cccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISIL------KEVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~------~~~d   73 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+....+.....     .......|+.|++++.++.      .++|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            4567899999999999999999999999999998654221111100     0011112788877766553      3689


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      ++||+||...
T Consensus       109 ~lv~nAg~~~  118 (273)
T 3uf0_A          109 VLVNNAGIIA  118 (273)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCCCCC
Confidence            9999999753

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.30  E-value=5e-11  Score=75.12  Aligned_cols=79  Identities=11%  Similarity=0.111  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc---------cccc----c----ccccc-cccccChHHHH
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS---------RTSK----L----EIHKE-FQELDEHEKII   66 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~---------~~~~----~----~~~~~-~~d~~~~~~~~   66 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.....         ....    .    ..... ..|+.|++++.
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            56689999999999999999999999999999998732110         0000    0    00111 12888988887


Q ss_pred             Hhhc-------cccEEEEcccCcC
Q 046878           67 SILK-------EVGVVISTVAYPQ   83 (104)
Q Consensus        67 ~~~~-------~~d~vv~~a~~~~   83 (104)
                      ++++       ++|++||+||...
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~~~  114 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGIAP  114 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC
Confidence            7764       6899999999753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.30  E-value=6.8e-12  Score=77.56  Aligned_cols=75  Identities=8%  Similarity=0.185  Sum_probs=55.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCccccc-cc----ccccc-cccccChHHHHHhhc----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTENSRTS-KL----EIHKE-FQELDEHEKIISILK----   70 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~~~~~-~~----~~~~~-~~d~~~~~~~~~~~~----   70 (104)
                      ++++||||+|++|+++++.|+++|+       .|.+++|++...+... ..    ..... ..|+.+++++.++++    
T Consensus         3 k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (244)
T 2bd0_A            3 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   82 (244)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999998       8999998764431110 00    00111 138888888877764    


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|+|||++|..
T Consensus        83 ~~g~id~li~~Ag~~   97 (244)
T 2bd0_A           83 RYGHIDCLVNNAGVG   97 (244)
T ss_dssp             HTSCCSEEEECCCCC
T ss_pred             hCCCCCEEEEcCCcC
Confidence               689999999964

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.30  E-value=7.5e-12  Score=79.29  Aligned_cols=78  Identities=8%  Similarity=0.079  Sum_probs=57.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----ccccc-cccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----EIHKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~~~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ..    ..... ..|+.+++++.++++       +
T Consensus         6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (280)
T 3tox_A            6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG   85 (280)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            55678999999999999999999999999999999865432110 00    00111 128888887777664       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus        86 iD~lvnnAg~~   96 (280)
T 3tox_A           86 LDTAFNNAGAL   96 (280)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999964

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.29  E-value=7.7e-12  Score=78.50  Aligned_cols=79  Identities=13%  Similarity=0.146  Sum_probs=54.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-ccc-cccc----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSR-TSKL----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~-~~~~----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|.++.++... .+. ....    ..... ..|+.|++++.+++.       
T Consensus        24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  103 (267)
T 4iiu_A           24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG  103 (267)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            455789999999999999999999999999776654322 110 0000    00111 128888888777664       


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ++|++||+||...
T Consensus       104 ~id~li~nAg~~~  116 (267)
T 4iiu_A          104 AWYGVVSNAGIAR  116 (267)
T ss_dssp             CCSEEEECCCCCC
T ss_pred             CccEEEECCCCCC
Confidence            6899999999753

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.29  E-value=2.1e-11  Score=76.03  Aligned_cols=78  Identities=12%  Similarity=0.150  Sum_probs=56.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-----ccc-ccccc--cChHHHHHhhc-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-----IHK-EFQEL--DEHEKIISILK-----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-----~~~-~~~d~--~~~~~~~~~~~-----   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ...     ... ...|+  .+++++.++++     
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            55679999999999999999999999999999999865432110 000     111 11266  77776666553     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        ++|++||+||..
T Consensus        90 ~g~id~lv~nAg~~  103 (252)
T 3f1l_A           90 YPRLDGVLHNAGLL  103 (252)
T ss_dssp             CSCCSEEEECCCCC
T ss_pred             CCCCCEEEECCccC
Confidence              689999999963

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.29  E-value=5.1e-12  Score=79.99  Aligned_cols=76  Identities=13%  Similarity=0.218  Sum_probs=53.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +.++++||||+|+||+++++.|+++|++|.+++|+... .+.. ...     .......|+.|++++.++++       +
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  107 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR  107 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            45689999999999999999999999999999875432 1100 000     00111128888777766654       7


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|++||+||.
T Consensus       108 iD~lvnnAg~  117 (280)
T 4da9_A          108 IDCLVNNAGI  117 (280)
T ss_dssp             CCEEEEECC-
T ss_pred             CCEEEECCCc
Confidence            8999999997

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.29  E-value=3e-12  Score=79.84  Aligned_cols=79  Identities=13%  Similarity=0.154  Sum_probs=58.0

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-cccc-ccccccChHHHHHhhc-------ccc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHK-EFQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~-~~~d~~~~~~~~~~~~-------~~d   73 (104)
                      .++.++++||||+|++|+++++.|+++|++|++++|+.+..+... .. .... ...|+.|++++.++++       ++|
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   82 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLN   82 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            466789999999999999999999999999999998764431110 00 0011 1138888888777664       469


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        83 ~lv~~Ag~~   91 (253)
T 1hxh_A           83 VLVNNAGIL   91 (253)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999974

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.29  E-value=7.9e-12  Score=78.58  Aligned_cols=82  Identities=13%  Similarity=0.175  Sum_probs=58.7

Q ss_pred             CCCCCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-cccc-cccc-cccccChHHHHHhhc----
Q 046878            1 MEGENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKLE-IHKE-FQELDEHEKIISILK----   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~~-~~~~-~~d~~~~~~~~~~~~----   70 (104)
                      |-..++.++++|||+  +|+||+++++.|+++|++|++++|+.... +.. .... .... ..|+.+++++.++++    
T Consensus         1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHH
Confidence            334466789999998  89999999999999999999999886431 110 0110 1111 138888887777664    


Q ss_pred             ------cccEEEEcccCc
Q 046878           71 ------EVGVVISTVAYP   82 (104)
Q Consensus        71 ------~~d~vv~~a~~~   82 (104)
                            ++|++||+||..
T Consensus        81 ~~g~~~~iD~lv~nAg~~   98 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGFM   98 (269)
T ss_dssp             HHCTTCCEEEEEECCCCC
T ss_pred             HhCCCCCceEEEECCccC
Confidence                  789999999864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.29  E-value=1.5e-11  Score=77.78  Aligned_cols=78  Identities=15%  Similarity=0.160  Sum_probs=56.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+.... +.. ...     .......|+.+.+++.++++       
T Consensus        27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  106 (283)
T 1g0o_A           27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG  106 (283)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4557899999999999999999999999999999886431 000 000     00111138888777766553       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||++|..
T Consensus       107 ~iD~lv~~Ag~~  118 (283)
T 1g0o_A          107 KLDIVCSNSGVV  118 (283)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            689999999974

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.29  E-value=2.4e-11  Score=76.75  Aligned_cols=78  Identities=14%  Similarity=0.215  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..... ...     .....+ .|+.+++++.++++       
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999999999999999999999999999986543110 000     011111 28888887777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       105 ~id~lv~nAg~~  116 (277)
T 4fc7_A          105 RIDILINCAAGN  116 (277)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCcCC
Confidence            689999999953

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.29  E-value=1.4e-11  Score=78.02  Aligned_cols=83  Identities=13%  Similarity=0.117  Sum_probs=59.3

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--ccccccccccChHHHHHhh-------c
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--EIHKEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~~~~~~~d~~~~~~~~~~~-------~   70 (104)
                      |...++.+.++||||++.||+++++.|++.|.+|.+.+|+.+..+.. ...  .......|+.|++++.+++       .
T Consensus        23 Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           23 MTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            33445667899999999999999999999999999999987554211 001  1111112888877776654       3


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ++|++||+||...
T Consensus       103 ~iDiLVNNAG~~~  115 (273)
T 4fgs_A          103 RIDVLFVNAGGGS  115 (273)
T ss_dssp             CEEEEEECCCCCC
T ss_pred             CCCEEEECCCCCC
Confidence            6899999999754

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.29  E-value=8.2e-12  Score=78.17  Aligned_cols=77  Identities=17%  Similarity=0.216  Sum_probs=54.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +.++++||||+|+||+++++.|+++|++|+++ .|+.+..+.. ...     .......|+.|++++.++++       +
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999886 5654332110 000     11111138888888777764       5


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus        83 id~lv~nAg~~   93 (258)
T 3oid_A           83 LDVFVNNAASG   93 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            69999999864

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.29  E-value=1.9e-11  Score=76.39  Aligned_cols=76  Identities=13%  Similarity=0.197  Sum_probs=56.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC--cccc-ccc----ccccc-cccccChHHHHHhhc-------c
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE--NSRT-SKL----EIHKE-FQELDEHEKIISILK-------E   71 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~--~~~~-~~~----~~~~~-~~d~~~~~~~~~~~~-------~   71 (104)
                      .++++||||+|++|+++++.|+++|++|++++|+.+.  .+.. ...    ..... ..|+.+++++.++++       +
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999999998654  2110 000    00111 128888888777664       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        82 iD~lv~nAg~~   92 (258)
T 3a28_C           82 FDVLVNNAGIA   92 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            89999999964

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.28  E-value=4.1e-12  Score=79.54  Aligned_cols=79  Identities=14%  Similarity=0.186  Sum_probs=57.6

Q ss_pred             CCCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhhc------
Q 046878            4 ENTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISILK------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~~------   70 (104)
                      .++.++++||||+  |++|+++++.|+++|++|++++|+++..+.....    ..... ..|+.|++++.++++      
T Consensus         5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (261)
T 2wyu_A            5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF   84 (261)
T ss_dssp             CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4566799999998  9999999999999999999999986411001110    11111 138888888777664      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||+||..
T Consensus        85 g~iD~lv~~Ag~~   97 (261)
T 2wyu_A           85 GGLDYLVHAIAFA   97 (261)
T ss_dssp             SSEEEEEECCCCC
T ss_pred             CCCCEEEECCCCC
Confidence             689999999964

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.28  E-value=2.2e-11  Score=75.51  Aligned_cols=73  Identities=15%  Similarity=0.233  Sum_probs=55.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHh-CCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-----cccEEEEcc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-----EVGVVISTV   79 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vv~~a   79 (104)
                      ++++++||||+|+||+++++.|++ .|+.|.+.+|+....  ......  ...|+.|++++.++++     ++|++||+|
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--~~~~~~--~~~Dv~~~~~v~~~~~~~~~~~id~lv~nA   78 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--AENLKF--IKADLTKQQDITNVLDIIKNVSFDGIFLNA   78 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--CTTEEE--EECCTTCHHHHHHHHHHTTTCCEEEEEECC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--cccceE--EecCcCCHHHHHHHHHHHHhCCCCEEEECC
Confidence            456899999999999999999998 778888888876522  111111  1138888888887765     689999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      |..
T Consensus        79 g~~   81 (244)
T 4e4y_A           79 GIL   81 (244)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            974

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.28  E-value=4.7e-12  Score=80.80  Aligned_cols=78  Identities=10%  Similarity=0.176  Sum_probs=57.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---c----ccc-ccccccChHHHHHhhc-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---E----IHK-EFQELDEHEKIISILK-----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~----~~~-~~~d~~~~~~~~~~~~-----   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+.. ...   .    ... ...|+.|++++.++++     
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  103 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK  103 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence            3457899999999999999999999999999999986543111 000   0    111 1138888888777764     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        ++|++||+||..
T Consensus       104 ~g~iD~lvnnAG~~  117 (297)
T 1xhl_A          104 FGKIDILVNNAGAN  117 (297)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCCCEEEECCCcC
Confidence              689999999863

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.28  E-value=1.6e-11  Score=75.98  Aligned_cols=72  Identities=21%  Similarity=0.289  Sum_probs=50.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-------hccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-------LKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------~~~~d~vv~~a~   80 (104)
                      ++++||||+|++|+++++.|+++|++|++++|+++..  ...........|+.+ +++.++       +.++|++||++|
T Consensus         3 k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag   79 (239)
T 2ekp_A            3 RKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--AQSLGAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAA   79 (239)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHHTCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHhhCcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCC
Confidence            6899999999999999999999999999999986542  111111111125555 433333       347899999998


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        80 ~~   81 (239)
T 2ekp_A           80 VN   81 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.27  E-value=1.6e-11  Score=77.25  Aligned_cols=77  Identities=12%  Similarity=0.204  Sum_probs=53.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC-CCCcccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP-VTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~-~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      ++++++||||+|++|+++++.|+++|++|.++.++ .+..+.. ...     .......|+.|++++.++++       +
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            45689999999999999999999999999877444 3222110 000     11111128888887777664       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus       105 id~li~nAg~~  115 (272)
T 4e3z_A          105 LDGLVNNAGIV  115 (272)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            79999999964

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.27  E-value=5.5e-12  Score=79.39  Aligned_cols=78  Identities=15%  Similarity=0.145  Sum_probs=55.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc-CCCCcccc-c------ccccccccccccCh----HHHHHhhc--
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRT-S------KLEIHKEFQELDEH----EKIISILK--   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r-~~~~~~~~-~------~~~~~~~~~d~~~~----~~~~~~~~--   70 (104)
                      |+.++++||||+|+||+++++.|+++|++|++++| +.+..+.. .      .........|+.++    +++.+++.  
T Consensus         9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   88 (276)
T 1mxh_A            9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS   88 (276)
T ss_dssp             --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence            55678999999999999999999999999999999 54332110 0      00011111278887    77766654  


Q ss_pred             -----cccEEEEcccCc
Q 046878           71 -----EVGVVISTVAYP   82 (104)
Q Consensus        71 -----~~d~vv~~a~~~   82 (104)
                           ++|++||+||..
T Consensus        89 ~~~~g~id~lv~nAg~~  105 (276)
T 1mxh_A           89 FRAFGRCDVLVNNASAY  105 (276)
T ss_dssp             HHHHSCCCEEEECCCCC
T ss_pred             HHhcCCCCEEEECCCCC
Confidence                 689999999964

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.27  E-value=4.3e-12  Score=82.00  Aligned_cols=90  Identities=12%  Similarity=0.070  Sum_probs=62.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCC--Cccc-cccccc--ccccccccChHHHHHhhccccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVT--ENSR-TSKLEI--HKEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~--~~~~-~~~~~~--~~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      +||+||||+|++|++++..|+..|+       +|.++++.+.  .... ......  .....|+.+.+.+.++++++|+|
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~~di~~~~~~~~a~~~~D~V   84 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADYA   84 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccccCCeEeccChHHHhCCCCEE
Confidence            4899999999999999999999885       7888887641  1100 000000  01112455555677888999999


Q ss_pred             EEcccCcC-------------hhhHHHHHHHHHHh
Q 046878           76 ISTVAYPQ-------------LLDQLKIVDAIKVA   97 (104)
Q Consensus        76 v~~a~~~~-------------~~~~~~l~~~~~~~   97 (104)
                      ||+||.+.             ...+.++++++.+.
T Consensus        85 ih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~  119 (327)
T 1y7t_A           85 LLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEV  119 (327)
T ss_dssp             EECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            99999754             34567888888876

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.27  E-value=1.1e-11  Score=78.55  Aligned_cols=78  Identities=10%  Similarity=0.252  Sum_probs=56.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----cccccc-ccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEF-QELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~-~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|.+++|+.+..+... ..     .....+ .|+.|++++.++++       
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  110 (281)
T 4dry_A           31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFA  110 (281)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35578999999999999999999999999999999865432110 00     000111 38888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||+||..
T Consensus       111 ~iD~lvnnAG~~  122 (281)
T 4dry_A          111 RLDLLVNNAGSN  122 (281)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            579999999964

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.27  E-value=1.6e-11  Score=78.25  Aligned_cols=78  Identities=14%  Similarity=0.159  Sum_probs=55.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--ccc-cc---c-ccccc-cccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRT-SK---L-EIHKE-FQELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~-~~---~-~~~~~-~~d~~~~~~~~~~~~------   70 (104)
                      ++.++++||||+|+||+++++.|+++|++|.+.+|+....  +.. ..   . ..... ..|+.|++++.++++      
T Consensus        47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  126 (294)
T 3r3s_A           47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL  126 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            4567899999999999999999999999999988874321  000 00   0 00111 128888887766653      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||++|..
T Consensus       127 g~iD~lv~nAg~~  139 (294)
T 3r3s_A          127 GGLDILALVAGKQ  139 (294)
T ss_dssp             TCCCEEEECCCCC
T ss_pred             CCCCEEEECCCCc
Confidence             689999999963

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.27  E-value=3.1e-11  Score=75.41  Aligned_cols=76  Identities=9%  Similarity=0.181  Sum_probs=56.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc--ccccccccccChHHHHHhh-------ccccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL--EIHKEFQELDEHEKIISIL-------KEVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~-------~~~d~vv~~   78 (104)
                      ++++||||++.||+++++.|+++|++|.+.+|+.+........  .......|+.|++++.+++       .++|++||+
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNN   82 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNN   82 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            6899999999999999999999999999999986544211111  1111113888888776664       468999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      ||...
T Consensus        83 AG~~~   87 (247)
T 3ged_A           83 ACRGS   87 (247)
T ss_dssp             CCCCC
T ss_pred             CCCCC
Confidence            98754

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.26  E-value=1.5e-11  Score=76.55  Aligned_cols=77  Identities=10%  Similarity=0.217  Sum_probs=54.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC-Ccccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT-ENSRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~-~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +.++++||||+|++|+++++.|+++|++|++++++.. ..... ...     .......|+.|.+++.++++       +
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   91 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE   91 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence            4578999999999999999999999999988884433 22110 000     11111128888887777664       6


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus        92 id~lv~~Ag~~  102 (256)
T 3ezl_A           92 IDVLVNNAGIT  102 (256)
T ss_dssp             EEEEEECCCCC
T ss_pred             CCEEEECCCCC
Confidence            79999999975

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.26  E-value=1.8e-11  Score=77.51  Aligned_cols=77  Identities=12%  Similarity=0.142  Sum_probs=56.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|++|+++++.|+++|++|++++|+++..+... ..     ..... ..|+.|++++.++++       
T Consensus        26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g  105 (286)
T 1xu9_A           26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG  105 (286)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            45678999999999999999999999999999999865432110 00     01111 138888887776654       


Q ss_pred             cccEEEEc-ccC
Q 046878           71 EVGVVIST-VAY   81 (104)
Q Consensus        71 ~~d~vv~~-a~~   81 (104)
                      ++|++||+ +|.
T Consensus       106 ~iD~li~naag~  117 (286)
T 1xu9_A          106 GLDMLILNHITN  117 (286)
T ss_dssp             SCSEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            68999999 564

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.26  E-value=1.7e-11  Score=75.70  Aligned_cols=75  Identities=15%  Similarity=0.294  Sum_probs=54.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------ccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------EVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~~d   73 (104)
                      ++++||||+|++|+++++.|+++|++|+++ .|+++..+.. ...     .......|+.+++++.++++       ++|
T Consensus         2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id   81 (244)
T 1edo_A            2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            589999999999999999999999999885 5664332110 000     01111138888888887765       689


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      ++||++|..
T Consensus        82 ~li~~Ag~~   90 (244)
T 1edo_A           82 VVVNNAGIT   90 (244)
T ss_dssp             EEEECCCCC
T ss_pred             EEEECCCCC
Confidence            999999864

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.26  E-value=4.3e-11  Score=75.61  Aligned_cols=78  Identities=10%  Similarity=0.145  Sum_probs=56.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc---------ccc----c----ccccc-cccccChHHHH
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR---------TSK----L----EIHKE-FQELDEHEKII   66 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~---------~~~----~----~~~~~-~~d~~~~~~~~   66 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+......         ...    .    ..... ..|+.|++++.
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            456789999999999999999999999999999987322100         000    0    00011 12888888877


Q ss_pred             Hhhc-------cccEEEEcccCc
Q 046878           67 SILK-------EVGVVISTVAYP   82 (104)
Q Consensus        67 ~~~~-------~~d~vv~~a~~~   82 (104)
                      ++++       ++|++||+||..
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~  110 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGIC  110 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCcC
Confidence            7664       689999999974

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.26  E-value=3.5e-11  Score=74.53  Aligned_cols=78  Identities=10%  Similarity=0.112  Sum_probs=55.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccc-ccccc--cChHHHHHhh------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHK-EFQEL--DEHEKIISIL------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~-~~~d~--~~~~~~~~~~------   69 (104)
                      ++.++++||||+|++|+++++.|+++|++|.+++|+....+.. ...     .... ...|+  .+.+++.+++      
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999999986543211 000     0000 01133  6776666554      


Q ss_pred             -ccccEEEEcccCc
Q 046878           70 -KEVGVVISTVAYP   82 (104)
Q Consensus        70 -~~~d~vv~~a~~~   82 (104)
                       .++|++||++|..
T Consensus        92 ~g~id~lv~nAg~~  105 (247)
T 3i1j_A           92 FGRLDGLLHNASII  105 (247)
T ss_dssp             HSCCSEEEECCCCC
T ss_pred             CCCCCEEEECCccC
Confidence             3689999999963

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.26  E-value=3.1e-11  Score=75.73  Aligned_cols=78  Identities=21%  Similarity=0.285  Sum_probs=56.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----c-----ccccccccccChHHHHHhhc-----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK----L-----EIHKEFQELDEHEKIISILK-----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~-----~~~~~~~d~~~~~~~~~~~~-----   70 (104)
                      ++.++++||||+|.||+++++.|+++|++|.+++|.....+....    .     .......|+.|++++.++++     
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999998876432211110    0     01111128889888877764     


Q ss_pred             --cccEEEEcccCc
Q 046878           71 --EVGVVISTVAYP   82 (104)
Q Consensus        71 --~~d~vv~~a~~~   82 (104)
                        ++|++||+||..
T Consensus        89 ~g~iD~lvnnAg~~  102 (262)
T 3ksu_A           89 FGKVDIAINTVGKV  102 (262)
T ss_dssp             HCSEEEEEECCCCC
T ss_pred             cCCCCEEEECCCCC
Confidence              689999999964

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.26  E-value=1.7e-11  Score=77.01  Aligned_cols=78  Identities=18%  Similarity=0.194  Sum_probs=55.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      +++++++||||+|++|+++++.|+++|+.|.+++++.... ... ...    ..... ..|+.|++++.++++       
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4457899999999999999999999999999988554322 000 000    01111 128888887777654       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       103 ~id~li~nAg~~  114 (269)
T 3gk3_A          103 KVDVLINNAGIT  114 (269)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            689999999975

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.26  E-value=6.3e-12  Score=79.33  Aligned_cols=77  Identities=10%  Similarity=0.153  Sum_probs=56.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc---ccccc-cccccChHHHHHhhcc-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL---EIHKE-FQELDEHEKIISILKE-------V   72 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~---~~~~~-~~d~~~~~~~~~~~~~-------~   72 (104)
                      |+ ++++||||+|+||+++++.|+++|++|++++|+++..+.. ...   ..... ..|+.|++++.++++.       +
T Consensus        20 ~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   98 (272)
T 2nwq_A           20 MS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATL   98 (272)
T ss_dssp             -C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred             cC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            45 7899999999999999999999999999999986543211 000   01111 1389998888887653       5


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |++||++|..
T Consensus        99 D~lvnnAG~~  108 (272)
T 2nwq_A           99 RGLINNAGLA  108 (272)
T ss_dssp             CEEEECCCCC
T ss_pred             CEEEECCCCC
Confidence            9999999864

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.25  E-value=2.7e-11  Score=77.99  Aligned_cols=79  Identities=11%  Similarity=0.225  Sum_probs=56.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC----------CCccc-cccc-----ccccccccccChHHHHHh
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV----------TENSR-TSKL-----EIHKEFQELDEHEKIISI   68 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~----------~~~~~-~~~~-----~~~~~~~d~~~~~~~~~~   68 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.          ...+. ....     .......|+.|++++.++
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            4557899999999999999999999999999998862          11100 0000     001111288888887776


Q ss_pred             hc-------cccEEEEcccCcC
Q 046878           69 LK-------EVGVVISTVAYPQ   83 (104)
Q Consensus        69 ~~-------~~d~vv~~a~~~~   83 (104)
                      ++       ++|++||+||...
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~~~  126 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGIVR  126 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC
Confidence            64       6899999999753

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.25  E-value=1.1e-11  Score=75.92  Aligned_cols=64  Identities=17%  Similarity=0.235  Sum_probs=53.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh---ccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL---KEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~vv~~a~~   81 (104)
                      ++.++++||||+|+||+++++.|+++|+.|.+++|+..              .|+.|++++.+++   .++|++||++|.
T Consensus         4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~   69 (223)
T 3uce_A            4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGS   69 (223)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCC
Confidence            45578999999999999999999999999999988763              3677777776665   478999999996


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus        70 ~   70 (223)
T 3uce_A           70 Y   70 (223)
T ss_dssp             C
T ss_pred             C
Confidence            5

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.25  E-value=2.1e-11  Score=76.84  Aligned_cols=78  Identities=13%  Similarity=0.138  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+  |+||+++++.|+++|++|++++|+....+.....    ..... ..|+.+++++.++++       
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   83 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            566799999998  9999999999999999999999987411011110    11111 138888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        84 ~id~lv~nAg~~   95 (275)
T 2pd4_A           84 SLDFIVHSVAFA   95 (275)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            679999999864

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.25  E-value=1.5e-10  Score=72.77  Aligned_cols=74  Identities=20%  Similarity=0.143  Sum_probs=56.4

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-------ccccEEE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-------KEVGVVI   76 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv   76 (104)
                      .++.++++||||++.||+++++.|+++|++|.+.+|+..+.  ..  +......|+.+++++.+++       .++|++|
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV   83 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LP--EELFVEADLTTKEGCAIVAEATRQRLGGVDVIV   83 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SC--TTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CC--cEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            45678999999999999999999999999999999976433  11  1111123788877666654       4689999


Q ss_pred             EcccC
Q 046878           77 STVAY   81 (104)
Q Consensus        77 ~~a~~   81 (104)
                      |++|.
T Consensus        84 nnAG~   88 (261)
T 4h15_A           84 HMLGG   88 (261)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99985

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.25  E-value=2.7e-11  Score=75.85  Aligned_cols=78  Identities=10%  Similarity=0.195  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCC-hhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccccc-ccccChHHHHHhhc------
Q 046878            5 NTKPKILIFGGTG-YLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEF-QELDEHEKIISILK------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G-~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~-~d~~~~~~~~~~~~------   70 (104)
                      ++.++++||||+| .+|+++++.|+++|++|++++|+.+..... ...     .....+ .|+.|++++.++++      
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            4567899999987 599999999999999999999986543211 000     011111 28888888777664      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||+||..
T Consensus       100 g~id~li~~Ag~~  112 (266)
T 3o38_A          100 GRLDVLVNNAGLG  112 (266)
T ss_dssp             SCCCEEEECCCCC
T ss_pred             CCCcEEEECCCcC
Confidence             579999999974

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.24  E-value=1.1e-11  Score=78.39  Aligned_cols=78  Identities=15%  Similarity=0.144  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c--ccccccccccChHHHHHhhc-------cccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L--EIHKEFQELDEHEKIISILK-------EVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~--~~~~~~~d~~~~~~~~~~~~-------~~d~   74 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+.... .  .......|+.+++++.++++       ++|+
T Consensus         3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   82 (281)
T 3zv4_A            3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT   82 (281)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            566899999999999999999999999999999998654321110 0  11111128888887766654       5799


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus        83 lvnnAg~~   90 (281)
T 3zv4_A           83 LIPNAGIW   90 (281)
T ss_dssp             EECCCCCC
T ss_pred             EEECCCcC
Confidence            99999963

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.24  E-value=3.7e-11  Score=75.59  Aligned_cols=78  Identities=10%  Similarity=0.187  Sum_probs=54.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK-------E   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------~   71 (104)
                      +.++++||||+|+||+++++.|+++|++|++..++.... +.. ...     .......|+.+++++.++++       +
T Consensus        26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  105 (267)
T 3u5t_A           26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG  105 (267)
T ss_dssp             -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999998876654322 100 000     01111128888888777664       6


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|++||+||...
T Consensus       106 iD~lvnnAG~~~  117 (267)
T 3u5t_A          106 VDVLVNNAGIMP  117 (267)
T ss_dssp             EEEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999999753

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.24  E-value=8.8e-12  Score=77.65  Aligned_cols=75  Identities=13%  Similarity=0.271  Sum_probs=56.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-cccc-ccccccChHHHHHhhc-------cccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHK-EFQELDEHEKIISILK-------EVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~-~~~d~~~~~~~~~~~~-------~~d~vv~   77 (104)
                      ++++||||+|+||+++++.|+++|++|++++|+.+..+... .. .... ...|+.|++++.++++       ++|++||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn   80 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN   80 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence            47999999999999999999999999999999864431110 00 0111 1138899888887764       6899999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      +||..
T Consensus        81 nAg~~   85 (248)
T 3asu_A           81 NAGLA   85 (248)
T ss_dssp             CCCCC
T ss_pred             CCCcC
Confidence            99964

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.24  E-value=3.2e-11  Score=75.58  Aligned_cols=78  Identities=10%  Similarity=0.106  Sum_probs=56.7

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+  |++|+++++.|+++|++|++++|++...+.....    ..... ..|+.+++++.++++       
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   86 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            445789999999  9999999999999999999999986211111100    01111 138888888877764       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        87 ~iD~lv~~Ag~~   98 (265)
T 1qsg_A           87 KFDGFVHSIGFA   98 (265)
T ss_dssp             SEEEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            679999999964

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.23  E-value=2.4e-11  Score=76.02  Aligned_cols=79  Identities=11%  Similarity=0.144  Sum_probs=56.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-ccc-----ccccccccccChHHHHHhhc------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SKL-----EIHKEFQELDEHEKIISILK------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~~-----~~~~~~~d~~~~~~~~~~~~------   70 (104)
                      .++.++++||||+|+||+++++.|+++|++|.++.++.... ... ...     .......|+.|++++.++++      
T Consensus         5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (259)
T 3edm_A            5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF   84 (259)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999885554332 100 000     01111138888888777764      


Q ss_pred             -cccEEEEcccCc
Q 046878           71 -EVGVVISTVAYP   82 (104)
Q Consensus        71 -~~d~vv~~a~~~   82 (104)
                       ++|++||+||..
T Consensus        85 g~id~lv~nAg~~   97 (259)
T 3edm_A           85 GEIHGLVHVAGGL   97 (259)
T ss_dssp             CSEEEEEECCCCC
T ss_pred             CCCCEEEECCCcc
Confidence             689999999864

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.23  E-value=1.4e-10  Score=74.50  Aligned_cols=78  Identities=10%  Similarity=0.149  Sum_probs=55.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc------cccc------------ccccccccccChHHHH
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR------TSKL------------EIHKEFQELDEHEKII   66 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~------~~~~------------~~~~~~~d~~~~~~~~   66 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+......      .+..            .......|+.|++++.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            455789999999999999999999999999999876322100      0000            0001112888888877


Q ss_pred             Hhhc-------cccEEEEcccCc
Q 046878           67 SILK-------EVGVVISTVAYP   82 (104)
Q Consensus        67 ~~~~-------~~d~vv~~a~~~   82 (104)
                      ++++       ++|++||+||..
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~~  146 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGIS  146 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCC
Confidence            7664       689999999975

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=99.23  E-value=6e-11  Score=67.67  Aligned_cols=95  Identities=15%  Similarity=0.178  Sum_probs=63.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~   83 (104)
                      +++++++|+|+ |.+|+.+++.|...|++|++++++++..+............|..+++.+.++ +.++|+||++++...
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~   82 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANI   82 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCH
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCch
Confidence            34568999998 9999999999999999999999876543211111111112366777777776 789999999998641


Q ss_pred             hhhHHHHHHHHHHhCCccc
Q 046878           84 LLDQLKIVDAIKVAGNIKV  102 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~~v~~  102 (104)
                       .....+...+++.+ +.+
T Consensus        83 -~~~~~~~~~~~~~~-~~~   99 (144)
T 2hmt_A           83 -QASTLTTLLLKELD-IPN   99 (144)
T ss_dssp             -HHHHHHHHHHHHTT-CSE
T ss_pred             -HHHHHHHHHHHHcC-CCe
Confidence             22234555666655 444

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=99.22  E-value=4.9e-11  Score=68.28  Aligned_cols=90  Identities=14%  Similarity=0.175  Sum_probs=62.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcCh
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQL   84 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~   84 (104)
                      ++++++|+|+ |.+|+.+++.|.+.|++|++++++++..+............|..+++.+.++ +.++|+||.+.+..  
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~--   81 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD--   81 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH--
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH--
Confidence            3468999997 9999999999999999999999987654222111111112388888888776 57899999998832  


Q ss_pred             hhHHHHHHHHHHhC
Q 046878           85 LDQLKIVDAIKVAG   98 (104)
Q Consensus        85 ~~~~~l~~~~~~~~   98 (104)
                      .....+...+++.+
T Consensus        82 ~~n~~~~~~a~~~~   95 (141)
T 3llv_A           82 EFNLKILKALRSVS   95 (141)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhC
Confidence            33344555555554

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.22  E-value=2.8e-11  Score=75.93  Aligned_cols=80  Identities=14%  Similarity=0.155  Sum_probs=59.4

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc-----cccccccccccChHHHHHhh-------c
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK-----LEIHKEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~-----~~~~~~~~d~~~~~~~~~~~-------~   70 (104)
                      .++.++++||||++.||+++++.|+++|.+|.+.+|+.+..+.. +.     .+......|+.|++++.+++       .
T Consensus         6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   85 (255)
T 4g81_D            6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI   85 (255)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence            46788999999999999999999999999999999986543211 00     01111112888888777665       3


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ++|++||+||...
T Consensus        86 ~iDiLVNNAG~~~   98 (255)
T 4g81_D           86 HVDILINNAGIQY   98 (255)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CCcEEEECCCCCC
Confidence            6799999999754

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.21  E-value=5.6e-11  Score=76.77  Aligned_cols=76  Identities=11%  Similarity=0.170  Sum_probs=56.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-c----------ccccc-cccccChHHHHHhhcc---
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-L----------EIHKE-FQELDEHEKIISILKE---   71 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~----------~~~~~-~~d~~~~~~~~~~~~~---   71 (104)
                      .++++||||+|+||+++++.|+++|++|+++.|+....+.... .          ..... ..|+.+++++.++++.   
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   81 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence            3579999999999999999999999998888776544321110 0          01111 1389999998888764   


Q ss_pred             --ccEEEEcccCc
Q 046878           72 --VGVVISTVAYP   82 (104)
Q Consensus        72 --~d~vv~~a~~~   82 (104)
                        +|++||+||..
T Consensus        82 g~iD~lVnnAG~~   94 (327)
T 1jtv_A           82 GRVDVLVCNAGLG   94 (327)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCCcC
Confidence              89999999864

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.21  E-value=1.2e-11  Score=78.68  Aligned_cols=77  Identities=17%  Similarity=0.237  Sum_probs=55.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----cccccc-ccccCh-HHHHHhh-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEF-QELDEH-EKIISIL-------K   70 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~-~d~~~~-~~~~~~~-------~   70 (104)
                      +.++++||||+|+||+++++.|+++|+.|++++|+..+.... ...     .....+ .|+.++ +++..++       .
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g   90 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG   90 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence            457899999999999999999999999999999986543110 000     011111 278886 6555544       3


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        91 ~iD~lv~nAg~~  102 (311)
T 3o26_A           91 KLDILVNNAGVA  102 (311)
T ss_dssp             SCCEEEECCCCC
T ss_pred             CCCEEEECCccc
Confidence            789999999975

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.21  E-value=1.6e-11  Score=76.76  Aligned_cols=77  Identities=8%  Similarity=0.167  Sum_probs=55.4

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhhc-------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISILK-------   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~-------   70 (104)
                      .|+.++++||||+|+||+++++.|+++|++|++++|+.+..+.. ...     .......|+.|++++.++++       
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35667999999999999999999999999999999886443111 000     01111138888887766543       


Q ss_pred             -cccEEEEccc
Q 046878           71 -EVGVVISTVA   80 (104)
Q Consensus        71 -~~d~vv~~a~   80 (104)
                       ++|++||+||
T Consensus        82 g~id~lvnnAg   92 (260)
T 2qq5_A           82 GRLDVLVNNAY   92 (260)
T ss_dssp             TCCCEEEECCC
T ss_pred             CCceEEEECCc
Confidence             4699999994

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.21  E-value=3.5e-11  Score=76.18  Aligned_cols=78  Identities=14%  Similarity=0.149  Sum_probs=56.4

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+  |+||+++++.|+++|++|++++|++...+.....    ..... ..|+.+++++.++++       
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG   98 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            445789999998  9999999999999999999999986311000100    01111 138888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        99 ~iD~lv~~Ag~~  110 (285)
T 2p91_A           99 SLDIIVHSIAYA  110 (285)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCCCC
Confidence            679999999864

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.21  E-value=4.5e-11  Score=76.16  Aligned_cols=78  Identities=19%  Similarity=0.213  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|  ++|+++++.|+++|++|.+++|+....+.....    ..... ..|+.|++++.++++       
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4567899999987  999999999999999999999986432111110    11111 138888888877764       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       108 ~iD~lVnnAG~~  119 (296)
T 3k31_A          108 SLDFVVHAVAFS  119 (296)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCCcC
Confidence            579999999975

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.20  E-value=5.9e-11  Score=74.42  Aligned_cols=79  Identities=8%  Similarity=0.119  Sum_probs=59.0

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------c
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~   70 (104)
                      +++.|+++||||++.||+++++.|.++|..|.+++|+.+..+.. +..     +......|+.+++++.+++       .
T Consensus         4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   83 (254)
T 4fn4_A            4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS   83 (254)
T ss_dssp             GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46788999999999999999999999999999999986554211 111     1111112888888777665       4


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      +.|++||+||..
T Consensus        84 ~iDiLVNNAGi~   95 (254)
T 4fn4_A           84 RIDVLCNNAGIM   95 (254)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CCCEEEECCccc
Confidence            689999999953

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.19  E-value=5.7e-11  Score=75.07  Aligned_cols=78  Identities=13%  Similarity=0.137  Sum_probs=55.9

Q ss_pred             CCCCeEEEEccCCh--hhHHHHHHHHhCCCeEEEEEcCCCC--cccc-ccccccccc-ccccChHHHHHhhc-------c
Q 046878            5 NTKPKILIFGGTGY--LGKYMVKASVSSGHNTFVYARPVTE--NSRT-SKLEIHKEF-QELDEHEKIISILK-------E   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~--iG~~l~~~l~~~~~~v~~~~r~~~~--~~~~-~~~~~~~~~-~d~~~~~~~~~~~~-------~   71 (104)
                      ++.++++||||+|+  +|+++++.|+++|++|.+++|+...  .+.. ........+ .|+.+++++.++++       .
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            45579999999966  9999999999999999999998711  1000 001111111 38888888777764       4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||+||..
T Consensus       104 id~li~nAg~~  114 (280)
T 3nrc_A          104 LDAIVHSIAFA  114 (280)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCEEEECCccC
Confidence            69999999974

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.19  E-value=1.6e-10  Score=72.36  Aligned_cols=78  Identities=12%  Similarity=0.143  Sum_probs=57.0

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-cccc-----ccccc-cccccChHHHHHhhc----
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSKL-----EIHKE-FQELDEHEKIISILK----   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~~-----~~~~~-~~d~~~~~~~~~~~~----   70 (104)
                      ++.++++||||+  |++|.++++.|++.|+.|.+++|+.... .. ....     ..... ..|+.+++++.++++    
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA   97 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence            456789999999  8999999999999999999998876543 10 0000     01111 128888888777664    


Q ss_pred             ---cccEEEEcccCc
Q 046878           71 ---EVGVVISTVAYP   82 (104)
Q Consensus        71 ---~~d~vv~~a~~~   82 (104)
                         ++|++||+||..
T Consensus        98 ~~g~id~li~nAg~~  112 (267)
T 3gdg_A           98 DFGQIDAFIANAGAT  112 (267)
T ss_dssp             HTSCCSEEEECCCCC
T ss_pred             HcCCCCEEEECCCcC
Confidence               569999999975

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.18  E-value=4.6e-11  Score=75.71  Aligned_cols=78  Identities=10%  Similarity=0.144  Sum_probs=56.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC-CCcccc-ccc-----ccccc-cccccC----hHHHHHhhc--
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV-TENSRT-SKL-----EIHKE-FQELDE----HEKIISILK--   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~-~~~~~~-~~~-----~~~~~-~~d~~~----~~~~~~~~~--   70 (104)
                      |+.++++||||+|+||+++++.|+++|++|++++|+. +..+.. ...     ..... ..|+.+    ++++.++++  
T Consensus        21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~  100 (288)
T 2x9g_A           21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC  100 (288)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence            5567899999999999999999999999999999986 332110 000     00111 138888    777766654  


Q ss_pred             -----cccEEEEcccCc
Q 046878           71 -----EVGVVISTVAYP   82 (104)
Q Consensus        71 -----~~d~vv~~a~~~   82 (104)
                           ++|++||+||..
T Consensus       101 ~~~~g~iD~lvnnAG~~  117 (288)
T 2x9g_A          101 FRAFGRCDVLVNNASAF  117 (288)
T ss_dssp             HHHHSCCCEEEECCCCC
T ss_pred             HHhcCCCCEEEECCCCC
Confidence                 689999999964

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.18  E-value=1e-10  Score=79.21  Aligned_cols=76  Identities=18%  Similarity=0.292  Sum_probs=55.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCccccc----ccc----ccc-ccccccChHHHHHhhcc-----
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRTS----KLE----IHK-EFQELDEHEKIISILKE-----   71 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~~----~~~----~~~-~~~d~~~~~~~~~~~~~-----   71 (104)
                      .++++|||++|++|.++++.|.++|+. |++++|+....+...    ...    ... ...|+.|++++.++++.     
T Consensus       226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g  305 (486)
T 2fr1_A          226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV  305 (486)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence            468999999999999999999999985 888899864321100    000    011 11389999999888865     


Q ss_pred             -ccEEEEcccCc
Q 046878           72 -VGVVISTVAYP   82 (104)
Q Consensus        72 -~d~vv~~a~~~   82 (104)
                       +|+|||++|..
T Consensus       306 ~ld~VIh~AG~~  317 (486)
T 2fr1_A          306 PLSAVFHAAATL  317 (486)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCcEEEECCccC
Confidence             49999999974

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.18  E-value=3.2e-11  Score=76.82  Aligned_cols=78  Identities=12%  Similarity=0.170  Sum_probs=56.5

Q ss_pred             CCCCeEEEEccCCh--hhHHHHHHHHhCCCeEEEEEcCCCCcccccc----cccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGTGY--LGKYMVKASVSSGHNTFVYARPVTENSRTSK----LEIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~--iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      ++.++++||||+|+  ||+++++.|+++|++|.+++|+....+....    ...... ..|+.|++++.++++       
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            45678999999987  9999999999999999999988432211100    011111 128888888777664       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus       109 ~iD~lVnnAG~~  120 (293)
T 3grk_A          109 KLDFLVHAIGFS  120 (293)
T ss_dssp             CCSEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            689999999975

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.18  E-value=5.1e-11  Score=74.58  Aligned_cols=78  Identities=10%  Similarity=0.101  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccc-cccccChHHHHHhhc-------
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKE-FQELDEHEKIISILK-------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~-~~d~~~~~~~~~~~~-------   70 (104)
                      .+.++++||||+  |+||+++++.|+++|++|.+++|+....+.....    ..... ..|+.+++++.++++       
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            456899999998  9999999999999999999999884322111110    11111 128889888877764       


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|++||+||..
T Consensus        92 ~id~lv~nAg~~  103 (271)
T 3ek2_A           92 SLDGLVHSIGFA  103 (271)
T ss_dssp             CEEEEEECCCCC
T ss_pred             CCCEEEECCccC
Confidence            579999999964

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.17  E-value=1.1e-10  Score=72.50  Aligned_cols=79  Identities=11%  Similarity=0.119  Sum_probs=53.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-ccc-----ccccccccccChHHHHHhhcc-----
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKL-----EIHKEFQELDEHEKIISILKE-----   71 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~-----~~~~~~~d~~~~~~~~~~~~~-----   71 (104)
                      +++.++++||||+|++|+++++.|+++|+.|.++.++... .... ...     .......|+.+.+++...++.     
T Consensus         4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (255)
T 3icc_A            4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL   83 (255)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence            3566899999999999999999999999999886554332 2110 000     000111277777766665432     


Q ss_pred             --------ccEEEEcccCc
Q 046878           72 --------VGVVISTVAYP   82 (104)
Q Consensus        72 --------~d~vv~~a~~~   82 (104)
                              +|++||+||..
T Consensus        84 ~~~~~~~~id~lv~nAg~~  102 (255)
T 3icc_A           84 QNRTGSTKFDILINNAGIG  102 (255)
T ss_dssp             HHHHSSSCEEEEEECCCCC
T ss_pred             cccccCCcccEEEECCCCC
Confidence                    89999999974

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=99.16  E-value=6.5e-10  Score=64.66  Aligned_cols=89  Identities=19%  Similarity=0.254  Sum_probs=61.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      ...++++|+|+ |.+|+.+++.|...|++|++++++++..+... .........|..+++.+.++ +.++|+||.+.+..
T Consensus        17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~   95 (155)
T 2g1u_A           17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDD   95 (155)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCH
T ss_pred             cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCc
Confidence            45578999996 99999999999999999999999876653222 11111111356666777665 78899999999864


Q ss_pred             ChhhHHHHHHHHHH
Q 046878           83 QLLDQLKIVDAIKV   96 (104)
Q Consensus        83 ~~~~~~~l~~~~~~   96 (104)
                      .  ....+...+..
T Consensus        96 ~--~~~~~~~~~~~  107 (155)
T 2g1u_A           96 S--TNFFISMNARY  107 (155)
T ss_dssp             H--HHHHHHHHHHH
T ss_pred             H--HHHHHHHHHHH
Confidence            3  23344445554

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.16  E-value=4.1e-11  Score=75.64  Aligned_cols=75  Identities=11%  Similarity=0.213  Sum_probs=54.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc-ccccc-ccccChHHHHHhhc------cccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE-IHKEF-QELDEHEKIISILK------EVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~-~~~~~-~d~~~~~~~~~~~~------~~d~v   75 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++|+.+..+... ... ....+ .|+.+.+++.++++      +.|++
T Consensus        28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l  107 (281)
T 3ppi_A           28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA  107 (281)
T ss_dssp             GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence            34568999999999999999999999999999999865432110 000 11111 28888888877764      67999


Q ss_pred             EEcc
Q 046878           76 ISTV   79 (104)
Q Consensus        76 v~~a   79 (104)
                      ||++
T Consensus       108 v~~a  111 (281)
T 3ppi_A          108 VVAH  111 (281)
T ss_dssp             EECC
T ss_pred             EEcc
Confidence            9994

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.16  E-value=1.5e-10  Score=78.87  Aligned_cols=77  Identities=17%  Similarity=0.293  Sum_probs=57.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc----ccc----cccc-cccccChHHHHHhhcc--ccE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS----KLE----IHKE-FQELDEHEKIISILKE--VGV   74 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~----~~~----~~~~-~~d~~~~~~~~~~~~~--~d~   74 (104)
                      .++++|||++|+||.+++++|.++|+ .|++++|+....+...    ...    .... ..|+.|.+++.+++..  +|+
T Consensus       259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~  338 (511)
T 2z5l_A          259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNA  338 (511)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcE
Confidence            46899999999999999999999998 5888888764321100    000    0111 1389999999999876  999


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      |||++|...
T Consensus       339 VVh~AGv~~  347 (511)
T 2z5l_A          339 VFHTAGILD  347 (511)
T ss_dssp             EEECCCCCC
T ss_pred             EEECCcccC
Confidence            999999753

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.15  E-value=7.3e-11  Score=75.02  Aligned_cols=78  Identities=15%  Similarity=0.297  Sum_probs=56.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCccccc--------ccccccccccccChHHHHHhhc---
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTS--------KLEIHKEFQELDEHEKIISILK---   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~---   70 (104)
                      ++.++++||||+|+||+++++.|+++|+   .|.+++|+.+..+...        .........|+.|++++.++++   
T Consensus        31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  110 (287)
T 3rku_A           31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP  110 (287)
T ss_dssp             HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred             cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            3567899999999999999999999887   8999998865432110        0011111128888888777664   


Q ss_pred             ----cccEEEEcccCc
Q 046878           71 ----EVGVVISTVAYP   82 (104)
Q Consensus        71 ----~~d~vv~~a~~~   82 (104)
                          ++|++||+||..
T Consensus       111 ~~~g~iD~lVnnAG~~  126 (287)
T 3rku_A          111 QEFKDIDILVNNAGKA  126 (287)
T ss_dssp             GGGCSCCEEEECCCCC
T ss_pred             HhcCCCCEEEECCCcC
Confidence                589999999963

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.15  E-value=4.6e-11  Score=74.50  Aligned_cols=75  Identities=11%  Similarity=0.150  Sum_probs=50.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccc-ccccc--cccChHHHHH----hhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEI-HKEFQ--ELDEHEKIIS----ILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~~--d~~~~~~~~~----~~~~~d~vv~~a~   80 (104)
                      ++++||||+|++|+++++.|+++|++|++++|+.+..+....... -....  |..+.+.+.+    .+.++|++||+||
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            579999999999999999999999999999998755421110100 00001  3333333222    2347899999999


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus        82 ~~   83 (254)
T 1zmt_A           82 FA   83 (254)
T ss_dssp             CC
T ss_pred             cC
Confidence            75

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.14  E-value=5.3e-11  Score=74.33  Aligned_cols=79  Identities=14%  Similarity=0.175  Sum_probs=56.9

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHh---CCCeEEEEEcCCCCcccc-ccc-------ccccccccccChHHHHHhhc-
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVS---SGHNTFVYARPVTENSRT-SKL-------EIHKEFQELDEHEKIISILK-   70 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~---~~~~v~~~~r~~~~~~~~-~~~-------~~~~~~~d~~~~~~~~~~~~-   70 (104)
                      +.++.++++||||+|+||+++++.|++   .|++|++++|+.+..+.. ...       .......|+.+++++.++++ 
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            346677899999999999999999998   899999999986443211 000       01111138888887776653 


Q ss_pred             --------ccc--EEEEcccC
Q 046878           71 --------EVG--VVISTVAY   81 (104)
Q Consensus        71 --------~~d--~vv~~a~~   81 (104)
                              +.|  ++||+||.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCC
T ss_pred             HHhccccccCCccEEEECCcc
Confidence                    357  99999986

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.14  E-value=5.4e-11  Score=75.61  Aligned_cols=78  Identities=15%  Similarity=0.235  Sum_probs=54.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEE-cCCCCcccc-ccc-----cccccc-ccccChH-------------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTENSRT-SKL-----EIHKEF-QELDEHE-------------   63 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~-r~~~~~~~~-~~~-----~~~~~~-~d~~~~~-------------   63 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++ |+.+..+.. ...     .....+ .|+.+++             
T Consensus         7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   86 (291)
T 1e7w_A            7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV   86 (291)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence            4567899999999999999999999999999999 775433110 000     001111 2777766             


Q ss_pred             ----HHHHhhc-------cccEEEEcccCc
Q 046878           64 ----KIISILK-------EVGVVISTVAYP   82 (104)
Q Consensus        64 ----~~~~~~~-------~~d~vv~~a~~~   82 (104)
                          ++.+++.       ++|++||+||..
T Consensus        87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~  116 (291)
T 1e7w_A           87 TLFTRCAELVAACYTHWGRCDVLVNNASSF  116 (291)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             chHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence                6666553       689999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.13  E-value=2.2e-10  Score=71.67  Aligned_cols=78  Identities=17%  Similarity=0.173  Sum_probs=57.2

Q ss_pred             CCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCcccccc----c---ccccccccccChHHHHHhh------
Q 046878            5 NTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSK----L---EIHKEFQELDEHEKIISIL------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~----~---~~~~~~~d~~~~~~~~~~~------   69 (104)
                      ++.|+++||||+|  .||+++++.|.++|++|.+.+|+.+..+....    .   .......|+.+++++.+++      
T Consensus         4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (256)
T 4fs3_A            4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKD   83 (256)
T ss_dssp             CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5778999999876  79999999999999999999998655421111    0   1111112888888776654      


Q ss_pred             -ccccEEEEcccCc
Q 046878           70 -KEVGVVISTVAYP   82 (104)
Q Consensus        70 -~~~d~vv~~a~~~   82 (104)
                       .++|++||++|..
T Consensus        84 ~G~iD~lvnnAg~~   97 (256)
T 4fs3_A           84 VGNIDGVYHSIAFA   97 (256)
T ss_dssp             HCCCSEEEECCCCC
T ss_pred             hCCCCEEEeccccc
Confidence             4689999999864

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=99.13  E-value=2.5e-10  Score=76.67  Aligned_cols=77  Identities=16%  Similarity=0.309  Sum_probs=55.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccc-cccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKE-FQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |++++++|+| +|++|+++++.|.+.|++|.+++|+.++.+... ....... ..|+.+.+++.+++.++|+|||+++..
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~   79 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT   79 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccc
Confidence            3457899999 599999999999999999999999865432111 1111111 127888888888899999999999874

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.12  E-value=1.9e-10  Score=74.46  Aligned_cols=93  Identities=12%  Similarity=0.144  Sum_probs=62.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc--ccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR--TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~--~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +++||+|+||+|++|+.++..|...+  .++.++++++.....  .........+..+.+.+++.++++++|+||+++|.
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~~~~t~d~~~al~gaDvVi~~ag~   86 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGV   86 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEEEESHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccccceEEEEeCCCCHHHHcCCCCEEEEcCCc
Confidence            34689999988999999999999888  688888876541100  00000000111122356778889999999999986


Q ss_pred             cC-------------hhhHHHHHHHHHHhC
Q 046878           82 PQ-------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        82 ~~-------------~~~~~~l~~~~~~~~   98 (104)
                      +.             ......+++.+.+.+
T Consensus        87 ~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~  116 (326)
T 1smk_A           87 PRKPGMTRDDLFKINAGIVKTLCEGIAKCC  116 (326)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Confidence            54             244567777777765

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.12  E-value=7.2e-11  Score=76.29  Aligned_cols=78  Identities=15%  Similarity=0.224  Sum_probs=54.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEE-cCCCCcccc-ccc-----ccccc-cccccChH-------------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTENSRT-SKL-----EIHKE-FQELDEHE-------------   63 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~-r~~~~~~~~-~~~-----~~~~~-~~d~~~~~-------------   63 (104)
                      ++.++++||||+|+||+++++.|+++|++|++++ |+.+..+.. ...     ..... ..|+.+++             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            3457899999999999999999999999999999 775433110 000     00111 12777766             


Q ss_pred             ----HHHHhhc-------cccEEEEcccCc
Q 046878           64 ----KIISILK-------EVGVVISTVAYP   82 (104)
Q Consensus        64 ----~~~~~~~-------~~d~vv~~a~~~   82 (104)
                          ++.+++.       ++|++||+||..
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~  153 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSF  153 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence                6666554       689999999964

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.10  E-value=2.1e-10  Score=71.59  Aligned_cols=82  Identities=11%  Similarity=0.169  Sum_probs=58.6

Q ss_pred             CCC--CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhh--cc
Q 046878            1 MEG--ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISIL--KE   71 (104)
Q Consensus         1 m~~--~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~--~~   71 (104)
                      |++  .++.++++||||++.||+++++.|.++|.+|.+.+|+..+. ..+..     .......|+.|++.+.+.+  .+
T Consensus         1 M~n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~-~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~   79 (247)
T 4hp8_A            1 MKNPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDE-TLDIIAKDGGNASALLIDFADPLAAKDSFTDAG   79 (247)
T ss_dssp             --CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHH-HHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTC
T ss_pred             CcCCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHH-HHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCC
Confidence            554  46788999999999999999999999999999999875421 11111     1111112888877776665  46


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      .|++||+||...
T Consensus        80 iDiLVNNAGi~~   91 (247)
T 4hp8_A           80 FDILVNNAGIIR   91 (247)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            899999999754

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.10  E-value=2.8e-10  Score=76.49  Aligned_cols=79  Identities=8%  Similarity=0.090  Sum_probs=55.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc---ccccccccccccChHHHHHhhc-------c-cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS---KLEIHKEFQELDEHEKIISILK-------E-VG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~-------~-~d   73 (104)
                      ++.++++|||++|.||.++++.|.++|++|++++|+........   .........|+.|.+++.+++.       + +|
T Consensus       211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id  290 (454)
T 3u0b_A          211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVD  290 (454)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCS
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCce
Confidence            45678999999999999999999999999999988643221000   0110111127888777766653       3 89


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      +|||+||...
T Consensus       291 ~lV~nAGv~~  300 (454)
T 3u0b_A          291 ILVNNAGITR  300 (454)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEECCcccC
Confidence            9999999753

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.09  E-value=3e-10  Score=70.86  Aligned_cols=75  Identities=13%  Similarity=0.181  Sum_probs=54.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccc-c-ccccc-cccccChHHHHHhhc-------cccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSK-L-EIHKE-FQELDEHEKIISILK-------EVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~-~-~~~~~-~~d~~~~~~~~~~~~-------~~d~v   75 (104)
                      ++++||||+|+||+++++.|+++|  +.|.+.+|+.+..+.... . ..... ..|+.|++++.++++       ++|++
T Consensus         3 k~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   82 (254)
T 3kzv_A            3 KVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDSL   82 (254)
T ss_dssp             CEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccEE
Confidence            689999999999999999999875  678888887644321110 0 01111 128888888777764       68999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||+||..
T Consensus        83 vnnAg~~   89 (254)
T 3kzv_A           83 VANAGVL   89 (254)
T ss_dssp             EEECCCC
T ss_pred             EECCccc
Confidence            9999973

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.09  E-value=2e-10  Score=72.95  Aligned_cols=78  Identities=14%  Similarity=0.174  Sum_probs=58.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc---ccc-ccccccChHHHHHhhccccEEEEcc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE---IHK-EFQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~---~~~-~~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      ++.++++|+|++|.+|+++++.|.+.|++|++++|+.++.+.. ....   ... ...|+.+++++.+.++++|+|||++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            4567899999999999999999999999999999986443111 0000   011 1127888889999999999999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      |..
T Consensus       197 g~g  199 (287)
T 1lu9_A          197 AIG  199 (287)
T ss_dssp             CTT
T ss_pred             Ccc
Confidence            854

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.09  E-value=7.6e-11  Score=73.07  Aligned_cols=78  Identities=17%  Similarity=0.200  Sum_probs=46.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc-ccccChHH---HH---HhhccccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF-QELDEHEK---II---SILKEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~---~~---~~~~~~d~vv~   77 (104)
                      +++++++||||+|++|+++++.|.+ |+.|++++|+++.............+ .|+.+.+.   +.   +.+.++|++||
T Consensus         3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~   81 (245)
T 3e9n_A            3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH   81 (245)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred             CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence            4567899999999999999999987 88999999886543211111111111 14444322   11   12347899999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      +||...
T Consensus        82 ~Ag~~~   87 (245)
T 3e9n_A           82 AAAVAR   87 (245)
T ss_dssp             CC----
T ss_pred             CCCcCC
Confidence            999753

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=99.09  E-value=2.5e-10  Score=75.71  Aligned_cols=87  Identities=17%  Similarity=0.272  Sum_probs=65.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC---CeEEEEEcCCCCcccc-cccc-----cccc-cccccChHHHHHhhcc--ccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTENSRT-SKLE-----IHKE-FQELDEHEKIISILKE--VGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~r~~~~~~~~-~~~~-----~~~~-~~d~~~~~~~~~~~~~--~d~v   75 (104)
                      ++++|+|| |++|+.+++.|.+.+   ..|.+++|+.++.+.. ....     .... ..|+.+.+++.+++++  +|+|
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV   80 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV   80 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence            58999998 999999999999987   3899999987554211 1111     1111 1388889999999987  8999


Q ss_pred             EEcccCcChhhHHHHHHHHHHhC
Q 046878           76 ISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        76 v~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      ||++|+..   ...++++|.+.+
T Consensus        81 in~ag~~~---~~~v~~a~l~~g  100 (405)
T 4ina_A           81 LNIALPYQ---DLTIMEACLRTG  100 (405)
T ss_dssp             EECSCGGG---HHHHHHHHHHHT
T ss_pred             EECCCccc---ChHHHHHHHHhC
Confidence            99998753   467788888776

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=99.08  E-value=5.2e-10  Score=63.49  Aligned_cols=92  Identities=15%  Similarity=0.142  Sum_probs=60.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHh-hccccEEEEcccCcCh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQL   84 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~   84 (104)
                      .++++|+|+ |.+|+.+++.|.+.|++|++++++++..+.... ........|..+++.+.+. +.++|+||++++... 
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~-   81 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE-   81 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH-
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch-
Confidence            368999997 999999999999999999999987654321111 1111111366677776655 678999999987642 


Q ss_pred             hhHHHHHHHHHHhCCccc
Q 046878           85 LDQLKIVDAIKVAGNIKV  102 (104)
Q Consensus        85 ~~~~~l~~~~~~~~~v~~  102 (104)
                       ....+...+...+ ..+
T Consensus        82 -~~~~~~~~~~~~~-~~~   97 (140)
T 1lss_A           82 -VNLMSSLLAKSYG-INK   97 (140)
T ss_dssp             -HHHHHHHHHHHTT-CCC
T ss_pred             -HHHHHHHHHHHcC-CCE
Confidence             2234445555554 344

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.05  E-value=1e-09  Score=70.71  Aligned_cols=78  Identities=17%  Similarity=0.174  Sum_probs=51.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC---------CCccc-cccccc--ccccccccChHHHHHh----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV---------TENSR-TSKLEI--HKEFQELDEHEKIISI----   68 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~---------~~~~~-~~~~~~--~~~~~d~~~~~~~~~~----   68 (104)
                      ++.++++||||+|+||+++++.|+++|++|++.++..         ...+. ......  .....|+.+.+++.++    
T Consensus         7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~   86 (319)
T 1gz6_A            7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   86 (319)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHH
Confidence            4567999999999999999999999999999876532         11100 000000  0011366665544443    


Q ss_pred             ---hccccEEEEcccCc
Q 046878           69 ---LKEVGVVISTVAYP   82 (104)
Q Consensus        69 ---~~~~d~vv~~a~~~   82 (104)
                         +.++|++||+||..
T Consensus        87 ~~~~g~iD~lVnnAG~~  103 (319)
T 1gz6_A           87 LDTFGRIDVVVNNAGIL  103 (319)
T ss_dssp             HHHTSCCCEEEECCCCC
T ss_pred             HHHcCCCCEEEECCCCC
Confidence               34689999999964

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.04  E-value=7.7e-10  Score=75.12  Aligned_cols=75  Identities=16%  Similarity=0.310  Sum_probs=55.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc----c-----ccccccccccChHHHHHhhc------c
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK----L-----EIHKEFQELDEHEKIISILK------E   71 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~----~-----~~~~~~~d~~~~~~~~~~~~------~   71 (104)
                      ++++|||++|.||.++++.|.++|+ .+.+++|+....+....    .     .......|+.|.+++.++++      .
T Consensus       240 ~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~  319 (496)
T 3mje_A          240 GSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAP  319 (496)
T ss_dssp             SEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSC
T ss_pred             CEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999998 78888887433211110    0     01111128999999888875      4


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|+|||++|..
T Consensus       320 ld~vVh~AGv~  330 (496)
T 3mje_A          320 LTAVFHSAGVA  330 (496)
T ss_dssp             EEEEEECCCCC
T ss_pred             CeEEEECCccc
Confidence            79999999975

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=99.02  E-value=2.5e-09  Score=61.98  Aligned_cols=90  Identities=11%  Similarity=0.120  Sum_probs=61.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-ccccc-cc--ccccccccccChHHHHHh-hccccEEEEcc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRTS-KL--EIHKEFQELDEHEKIISI-LKEVGVVISTV   79 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~~-~~--~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a   79 (104)
                      |..++++|+|+ |.+|+.+++.|.+.|++|++++++++. .+... ..  .......|..+++.+.++ +.++|+|+.+.
T Consensus         1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~   79 (153)
T 1id1_A            1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALS   79 (153)
T ss_dssp             CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence            34568999996 999999999999999999999997521 10011 00  111112388888888887 89999999998


Q ss_pred             cCcChhhHHHHHHHHHHh
Q 046878           80 AYPQLLDQLKIVDAIKVA   97 (104)
Q Consensus        80 ~~~~~~~~~~l~~~~~~~   97 (104)
                      +...  ....+...+++.
T Consensus        80 ~~d~--~n~~~~~~a~~~   95 (153)
T 1id1_A           80 DNDA--DNAFVVLSAKDM   95 (153)
T ss_dssp             SCHH--HHHHHHHHHHHH
T ss_pred             CChH--HHHHHHHHHHHH
Confidence            8642  233444455554

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=99.00  E-value=9e-10  Score=74.31  Aligned_cols=77  Identities=18%  Similarity=0.336  Sum_probs=56.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccc-cccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKE-FQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++++++|+|+ |++|+++++.|.+. +++|++++|+.++.+.......... ..|+.+.+++.+++.++|+|||+++..
T Consensus        21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~   99 (467)
T 2axq_A           21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYT   99 (467)
T ss_dssp             --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGG
T ss_pred             CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchh
Confidence            45578999997 99999999999988 6789999998654321111111111 127778888888899999999999975

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=98.96  E-value=1.3e-10  Score=72.10  Aligned_cols=74  Identities=16%  Similarity=0.141  Sum_probs=48.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEE-E--cCCCCcccc-cccccccccccccChHHHHH----hhccccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVY-A--RPVTENSRT-SKLEIHKEFQELDEHEKIIS----ILKEVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~--r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~----~~~~~d~vv~~a   79 (104)
                      ++++||||+|++|+++++.|+++|++|+++ +  |+++..+.. ... .-..+.|..+.+.+.+    .+.++|++||+|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~g~iD~lv~~A   80 (244)
T 1zmo_A            2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-PGTIALAEQKPERLVDATLQHGEAIDTIVSND   80 (244)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-TTEEECCCCCGGGHHHHHGGGSSCEEEEEECC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-CCCcccCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            589999999999999999999999999998 5  775443111 001 0011113333333322    234789999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      |..
T Consensus        81 g~~   83 (244)
T 1zmo_A           81 YIP   83 (244)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            853

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.94  E-value=7e-09  Score=64.14  Aligned_cols=74  Identities=22%  Similarity=0.364  Sum_probs=52.8

Q ss_pred             CCCeEEEEcc----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccChHHH---
Q 046878            6 TKPKILIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKI---   65 (104)
Q Consensus         6 ~~~~i~i~Ga----------------~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~---   65 (104)
                      +.++++||||                +|.+|.++++.++.+|++|++++|+...... +...    ...++...+++   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~~~~~----~~~~v~s~~em~~~   77 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEPHPNL----SIREITNTKDLLIE   77 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCCCTTE----EEEECCSHHHHHHH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccCCCCe----EEEEHhHHHHHHHH
Confidence            3578999999                8999999999999999999999987543211 1111    11244444433   


Q ss_pred             -HHhhccccEEEEcccCcC
Q 046878           66 -ISILKEVGVVISTVAYPQ   83 (104)
Q Consensus        66 -~~~~~~~d~vv~~a~~~~   83 (104)
                       .+.+.++|++|++|+...
T Consensus        78 v~~~~~~~Dili~aAAvsD   96 (232)
T 2gk4_A           78 MQERVQDYQVLIHSMAVSD   96 (232)
T ss_dssp             HHHHGGGCSEEEECSBCCS
T ss_pred             HHHhcCCCCEEEEcCcccc
Confidence             344578999999999765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.93  E-value=4.1e-09  Score=62.69  Aligned_cols=90  Identities=11%  Similarity=0.094  Sum_probs=61.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccccccccChHHHHHh--hccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI--LKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vv~~a~~~   82 (104)
                      ..++++|+|+ |.+|+.+++.|.+. |++|++++++++..+............|..+++.+.++  +.++|+||.+.+..
T Consensus        38 ~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~  116 (183)
T 3c85_A           38 GHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH  116 (183)
T ss_dssp             TTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence            3468999996 99999999999998 99999999987554221111111112367777878776  78899999988753


Q ss_pred             ChhhHHHHHHHHHHhC
Q 046878           83 QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~   98 (104)
                      .  ....++..++..+
T Consensus       117 ~--~~~~~~~~~~~~~  130 (183)
T 3c85_A          117 Q--GNQTALEQLQRRN  130 (183)
T ss_dssp             H--HHHHHHHHHHHTT
T ss_pred             H--HHHHHHHHHHHHC
Confidence            2  2334445555443

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.92  E-value=1.1e-09  Score=70.83  Aligned_cols=91  Identities=11%  Similarity=0.088  Sum_probs=60.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcC----CCCccc-cccccc--ccccccccChHHHHHhhccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARP----VTENSR-TSKLEI--HKEFQELDEHEKIISILKEV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~----~~~~~~-~~~~~~--~~~~~d~~~~~~~~~~~~~~   72 (104)
                      ++||+|+||+|++|++++..|+..+.       ++.+++++    .++.+. ......  .....++...+++.++++++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~~~i~~~~~~~~al~~a   84 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLLAGMTAHADPMTAFKDA   84 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTEEEEEEESSHHHHTTTC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccccCcEEEecCcHHHhCCC
Confidence            46899999999999999999998774       68888776    221110 000000  01112344445667889999


Q ss_pred             cEEEEcccCcC-------------hhhHHHHHHHHHHh
Q 046878           73 GVVISTVAYPQ-------------LLDQLKIVDAIKVA   97 (104)
Q Consensus        73 d~vv~~a~~~~-------------~~~~~~l~~~~~~~   97 (104)
                      |+|||++|.+.             .....++++.+.+.
T Consensus        85 D~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~  122 (329)
T 1b8p_A           85 DVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV  122 (329)
T ss_dssp             SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999764             12345677777766

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=98.92  E-value=3.9e-09  Score=67.09  Aligned_cols=40  Identities=15%  Similarity=0.103  Sum_probs=34.8

Q ss_pred             CCCCCCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            1 MEGENTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      |...++.++++||||+  |+||+++++.|+++|++|++++|+
T Consensus         2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~   43 (297)
T 1d7o_A            2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWV   43 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEH
T ss_pred             CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeecc
Confidence            4455677899999998  999999999999999999998754

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.90  E-value=1.2e-08  Score=62.95  Aligned_cols=75  Identities=16%  Similarity=0.246  Sum_probs=53.9

Q ss_pred             CCCCCeEEEEcc----------------CChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHH
Q 046878            4 ENTKPKILIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIIS   67 (104)
Q Consensus         4 ~~~~~~i~i~Ga----------------~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~   67 (104)
                      .++.++++||||                +|.+|.++++.|..+|++|++++++.. ...+...    ...|+.+.+++.+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~~~g~----~~~dv~~~~~~~~   79 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPTPPFV----KRVDVMTALEMEA   79 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCCCTTE----EEEECCSHHHHHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cccCCCC----eEEccCcHHHHHH
Confidence            356789999999                699999999999999999999887652 2111111    1235555554443


Q ss_pred             ----hhccccEEEEcccCcC
Q 046878           68 ----ILKEVGVVISTVAYPQ   83 (104)
Q Consensus        68 ----~~~~~d~vv~~a~~~~   83 (104)
                          .+.++|++|++||...
T Consensus        80 ~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           80 AVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHHHHGGGCSEEEECCBCCS
T ss_pred             HHHHhcCCCCEEEECCcccC
Confidence                3567999999999764

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.90  E-value=8.8e-09  Score=58.94  Aligned_cols=74  Identities=15%  Similarity=0.126  Sum_probs=56.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      .+++|+|+ |.+|+.+++.|.+.|++|++++++++..+............|..+++.+.++ +.++|+||.+.+..
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~   82 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNG   82 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence            58999997 9999999999999999999999998655322221211122378888888776 67899999998864

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=98.89  E-value=2.8e-09  Score=74.00  Aligned_cols=78  Identities=8%  Similarity=0.071  Sum_probs=48.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC---------CCCcccc-cccc--cccccccccChHHHHHhh---
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP---------VTENSRT-SKLE--IHKEFQELDEHEKIISIL---   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~---------~~~~~~~-~~~~--~~~~~~d~~~~~~~~~~~---   69 (104)
                      ++.++++||||+|.||+++++.|+++|+.|++++|+         ....+.. ....  ......|+.+.+++.+++   
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~   96 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA   96 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence            566899999999999999999999999999998872         2211000 0000  001112666666555554   


Q ss_pred             ----ccccEEEEcccCc
Q 046878           70 ----KEVGVVISTVAYP   82 (104)
Q Consensus        70 ----~~~d~vv~~a~~~   82 (104)
                          ..+|++||+||..
T Consensus        97 ~~~~g~iDiLVnnAGi~  113 (613)
T 3oml_A           97 IKAFGRVDILVNNAGIL  113 (613)
T ss_dssp             --------CEECCCCCC
T ss_pred             HHHCCCCcEEEECCCCC
Confidence                3689999999975

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=98.87  E-value=7.5e-09  Score=70.73  Aligned_cols=77  Identities=12%  Similarity=0.129  Sum_probs=53.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCe-EEEE-EcCCCC----------cccccc-cc-------ccc-ccccccChHHH
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHN-TFVY-ARPVTE----------NSRTSK-LE-------IHK-EFQELDEHEKI   65 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~-~r~~~~----------~~~~~~-~~-------~~~-~~~d~~~~~~~   65 (104)
                      .++++||||+|.||.++++.|.++|.. +.++ +|+...          .+.... ..       ... ...|+.|.+++
T Consensus       251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v  330 (525)
T 3qp9_A          251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAA  330 (525)
T ss_dssp             TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHH
Confidence            468999999999999999999999987 6666 777432          100000 00       011 11289999998


Q ss_pred             HHhhc------cccEEEEcccCcC
Q 046878           66 ISILK------EVGVVISTVAYPQ   83 (104)
Q Consensus        66 ~~~~~------~~d~vv~~a~~~~   83 (104)
                      .+++.      .+|+|||+||...
T Consensus       331 ~~~~~~i~~~g~id~vVh~AGv~~  354 (525)
T 3qp9_A          331 ARLLAGVSDAHPLSAVLHLPPTVD  354 (525)
T ss_dssp             HHHHHTSCTTSCEEEEEECCCCCC
T ss_pred             HHHHHHHHhcCCCcEEEECCcCCC
Confidence            88875      4699999999753

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=98.79  E-value=8.6e-09  Score=66.10  Aligned_cols=37  Identities=16%  Similarity=0.138  Sum_probs=32.9

Q ss_pred             CCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            4 ENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         4 ~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      .++.++++||||  +|+||+++++.|+++|++|++++|+
T Consensus         6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (315)
T 2o2s_A            6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWP   44 (315)
T ss_dssp             CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECH
T ss_pred             cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecc
Confidence            356678999999  8999999999999999999998864

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.79  E-value=1.6e-08  Score=61.74  Aligned_cols=74  Identities=15%  Similarity=0.176  Sum_probs=56.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      |+++|+|+ |.+|+.+++.|.+.|++|++++++++..+.... ........|..+++.+.++ +.++|+|+.+.+..
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   76 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRD   76 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCc
Confidence            47999997 999999999999999999999998765422111 1111122388888888876 78999999888764

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.75  E-value=1.1e-08  Score=65.82  Aligned_cols=91  Identities=16%  Similarity=0.145  Sum_probs=57.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEc--CCCCccc----cccc-ccccccccccC-hHHHHHhhccccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYAR--PVTENSR----TSKL-EIHKEFQELDE-HEKIISILKEVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r--~~~~~~~----~~~~-~~~~~~~d~~~-~~~~~~~~~~~d~vv~   77 (104)
                      +||+|+||+|++|++++..|+..+.  ++.++++  +.+..+.    .... .....-.++.+ .+++.++++++|+|||
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~l~~al~gaD~Vi~   80 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCCcchHHHhCCCCEEEE
Confidence            4899999999999999999998774  5777777  3321100    0000 00100002222 2236777999999999


Q ss_pred             cccCcC-------------hhhHHHHHHHHHHhC
Q 046878           78 TVAYPQ-------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        78 ~a~~~~-------------~~~~~~l~~~~~~~~   98 (104)
                      ++|.+.             ...+.++++++.+.+
T Consensus        81 ~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~  114 (313)
T 1hye_A           81 TSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC  114 (313)
T ss_dssp             CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999754             234557777777664

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=98.74  E-value=3.3e-08  Score=63.42  Aligned_cols=37  Identities=16%  Similarity=0.171  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            4 ENTKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         4 ~~~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      .++.++++|||+  +++||+++++.|+++|++|++++|+
T Consensus         6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~   44 (319)
T 2ptg_A            6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWP   44 (319)
T ss_dssp             CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECH
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEecc
Confidence            356678999998  8999999999999999999998764

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.73  E-value=8.4e-09  Score=66.12  Aligned_cols=88  Identities=10%  Similarity=0.094  Sum_probs=54.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEc--CCCCcccccccccccc--c-c--cccChHHHHHhhccccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYAR--PVTENSRTSKLEIHKE--F-Q--ELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r--~~~~~~~~~~~~~~~~--~-~--d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      +||+|+||+|++|++++..|+..+.  ++.++++  ++++.+. ...+....  . .  .+.. +. .++++++|+|||+
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~-~~~dl~~~~~~~~~~~v~~-~~-~~a~~~aDvVi~~   77 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVG-QAADTNHGIAYDSNTRVRQ-GG-YEDTAGSDVVVIT   77 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHH-HHHHHHHHHTTTCCCEEEE-CC-GGGGTTCSEEEEC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHH-HHHHHHHHHhhCCCcEEEe-CC-HHHhCCCCEEEEc
Confidence            4899999889999999999988775  5777777  3321100 00000000  0 0  0100 11 4568899999999


Q ss_pred             ccCcC-------------hhhHHHHHHHHHHhC
Q 046878           79 VAYPQ-------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        79 a~~~~-------------~~~~~~l~~~~~~~~   98 (104)
                      +|.+.             .....++++++.+.+
T Consensus        78 ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~  110 (303)
T 1o6z_A           78 AGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN  110 (303)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence            99764             134567777777665

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=98.69  E-value=1e-07  Score=63.21  Aligned_cols=77  Identities=14%  Similarity=0.065  Sum_probs=55.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHh-CCCeEEEEEcCCCCcccc------------c-ccc-----cccccccccChHHHH
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTENSRT------------S-KLE-----IHKEFQELDEHEKII   66 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~~r~~~~~~~~------------~-~~~-----~~~~~~d~~~~~~~~   66 (104)
                      ..++++||||++.||.++++.|++ .|..|.+++|+.+.....            . ...     ......|+.+++++.
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~  125 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ  125 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            357899999999999999999999 999999988876543110            0 000     011112888887776


Q ss_pred             Hhh-------ccccEEEEcccCc
Q 046878           67 SIL-------KEVGVVISTVAYP   82 (104)
Q Consensus        67 ~~~-------~~~d~vv~~a~~~   82 (104)
                      +++       ..+|++||++|..
T Consensus       126 ~~v~~i~~~~G~IDiLVNNAG~~  148 (405)
T 3zu3_A          126 LTIDAIKQDLGQVDQVIYSLASP  148 (405)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCS
T ss_pred             HHHHHHHHHcCCCCEEEEcCccc
Confidence            654       3689999999863

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.69  E-value=1e-07  Score=61.38  Aligned_cols=75  Identities=19%  Similarity=0.250  Sum_probs=50.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccccccccccccccC---hHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLEIHKEFQELDE---HEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +||.|+|++|++|+.++..|+..+  .++.++++++... ............++..   .+++.++++++|+||+++|.+
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~-~a~dL~~~~~~~~l~~~~~t~d~~~a~~~aDvVvi~ag~~   79 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPG-VAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVP   79 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHH-HHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHH-HHHHHhccCcCceEEEecCCCCHHHHhCCCCEEEECCCcC
Confidence            489999988999999999999887  6899999876111 0000000000001222   245777899999999999876


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        80 ~   80 (314)
T 1mld_A           80 R   80 (314)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=98.68  E-value=9.7e-08  Score=63.65  Aligned_cols=76  Identities=12%  Similarity=0.083  Sum_probs=54.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHh-CCCeEEEEEcCCCCcccc-------------cccc-----cccccccccChHHHH
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTENSRT-------------SKLE-----IHKEFQELDEHEKII   66 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~~r~~~~~~~~-------------~~~~-----~~~~~~d~~~~~~~~   66 (104)
                      ..++++||||++.||.++++.|.. .|..|.+++|+.+.....             ....     ......|+.+++++.
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            357899999999999999999999 999999999876543210             0000     011112888877665


Q ss_pred             Hh-------h-ccccEEEEcccC
Q 046878           67 SI-------L-KEVGVVISTVAY   81 (104)
Q Consensus        67 ~~-------~-~~~d~vv~~a~~   81 (104)
                      ++       + ..+|++||+||.
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCC
T ss_pred             HHHHHHHHHcCCCCCEEEEcCcc
Confidence            54       3 568999999986

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=98.67  E-value=4.6e-08  Score=73.18  Aligned_cols=78  Identities=13%  Similarity=0.207  Sum_probs=53.7

Q ss_pred             CCCCeEEEEccCCh-hhHHHHHHHHhCCCeEEEEE-cCCCCcccc-ccc---------ccccccccccChHHHHHhhc--
Q 046878            5 NTKPKILIFGGTGY-LGKYMVKASVSSGHNTFVYA-RPVTENSRT-SKL---------EIHKEFQELDEHEKIISILK--   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~-iG~~l~~~l~~~~~~v~~~~-r~~~~~~~~-~~~---------~~~~~~~d~~~~~~~~~~~~--   70 (104)
                      ++.++++||||+|. ||.++++.|++.|+.|++++ |+....... ...         .......|+.|.+++.+++.  
T Consensus       474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I  553 (1688)
T 2pff_A          474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  553 (1688)
T ss_dssp             CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred             cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence            45678999999998 99999999999999998884 544333110 000         00111127888777766542  


Q ss_pred             -----------cccEEEEcccCc
Q 046878           71 -----------EVGVVISTVAYP   82 (104)
Q Consensus        71 -----------~~d~vv~~a~~~   82 (104)
                                 ++|++||+||..
T Consensus       554 ~e~~~~~GfG~~IDILVNNAGI~  576 (1688)
T 2pff_A          554 YDTEKNGGLGWDLDAIIPFAAIP  576 (1688)
T ss_dssp             HSCTTSSSCCCCCCEEECCCCCC
T ss_pred             HHhccccccCCCCeEEEECCCcC
Confidence                       589999999964

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=98.67  E-value=4.2e-08  Score=64.12  Aligned_cols=88  Identities=9%  Similarity=0.154  Sum_probs=51.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-----C-eEEEEEcCCCC-cccccccccccccc--cccChHHHHHhhccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-----H-NTFVYARPVTE-NSRTSKLEIHKEFQ--ELDEHEKIISILKEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-----~-~v~~~~r~~~~-~~~~~~~~~~~~~~--d~~~~~~~~~~~~~~d~v   75 (104)
                      |++++|+|+||+|++|+.+++.|.+++     . +++.+.++... .........+....  ++.+.+  .+.+.++|+|
T Consensus         7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~~~~~--~~~~~~~DvV   84 (352)
T 2nqt_A            7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVVEPTE--AAVLGGHDAV   84 (352)
T ss_dssp             CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBCEECC--HHHHTTCSEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeeeccCC--HHHhcCCCEE
Confidence            555699999999999999999999877     3 56666543221 10111111111000  111111  1235689999


Q ss_pred             EEcccCcChhhHHHHHHHHHHhC
Q 046878           76 ISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        76 v~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      |.|+|...   ...++..+ +++
T Consensus        85 f~alg~~~---s~~~~~~~-~~G  103 (352)
T 2nqt_A           85 FLALPHGH---SAVLAQQL-SPE  103 (352)
T ss_dssp             EECCTTSC---CHHHHHHS-CTT
T ss_pred             EECCCCcc---hHHHHHHH-hCC
Confidence            99998754   24556555 555

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=98.63  E-value=1.4e-07  Score=59.71  Aligned_cols=91  Identities=15%  Similarity=0.135  Sum_probs=51.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-CCeEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |+|+||+|+||+|.+|+.+++.+.+. +.++..+ +++.+.....+..+....-..+.-.+++.+++.++|+||.++.+.
T Consensus         5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~DVVIDfT~p~   84 (272)
T 4f3y_A            5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEADYLIDFTLPE   84 (272)
T ss_dssp             -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCSEEEECSCHH
T ss_pred             ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCCEEEEcCCHH
Confidence            66679999999999999999999875 4566654 554322100000000000001111233455566789999887543


Q ss_pred             ChhhHHHHHHHHHHhC
Q 046878           83 QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~   98 (104)
                         .....++.|.+++
T Consensus        85 ---a~~~~~~~al~~G   97 (272)
T 4f3y_A           85 ---GTLVHLDAALRHD   97 (272)
T ss_dssp             ---HHHHHHHHHHHHT
T ss_pred             ---HHHHHHHHHHHcC
Confidence               3345555566665

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.63  E-value=1.3e-07  Score=65.63  Aligned_cols=38  Identities=24%  Similarity=0.257  Sum_probs=32.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .++.+.++||||++.||+++++.|+++|++|++.+|+.
T Consensus         5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~   42 (604)
T 2et6_A            5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGG   42 (604)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc
Confidence            45667899999999999999999999999999887754

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.63  E-value=5.3e-08  Score=59.94  Aligned_cols=87  Identities=7%  Similarity=0.001  Sum_probs=60.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLL   85 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~   85 (104)
                      .++++|+|+ |.+|+.+++.|.+.|+ |++++++++..+... ........|..+++.+.++ +.++|.||.+.+...  
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~--   83 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS--   83 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH--
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH--
Confidence            358999997 9999999999999999 999988876542221 1111112388888988877 889999999887542  


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                      ....+...+++.+
T Consensus        84 ~n~~~~~~a~~~~   96 (234)
T 2aef_A           84 ETIHCILGIRKID   96 (234)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHC
Confidence            2234445555554

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.63  E-value=1.5e-08  Score=61.39  Aligned_cols=75  Identities=17%  Similarity=0.241  Sum_probs=50.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++|+|+||+|.+|+.+++.|.+.|++|++++|++++.+.... ........++. .+++.++++++|+||++++...
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~Vi~~~~~~~   76 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASIT-GMKNEDAAEACDIAVLTIPWEH   76 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEE-EEEHHHHHHHCSEEEECSCHHH
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCCCC-hhhHHHHHhcCCEEEEeCChhh
Confidence            379999977999999999999999999999988654321110 00000001122 2345666788999999998643

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=98.61  E-value=1e-07  Score=60.95  Aligned_cols=40  Identities=23%  Similarity=0.381  Sum_probs=28.9

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS   45 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~   45 (104)
                      .|+ +||.++|- |.+|..+++.|+++||+|++++|++++.+
T Consensus         3 ~Ms-~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~   42 (297)
T 4gbj_A            3 AMS-EKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKAE   42 (297)
T ss_dssp             -CC-CEEEEECC-STTHHHHHHHHHHTTCEEEEC-------C
T ss_pred             CCC-CcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence            344 48999995 99999999999999999999999887653

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=98.59  E-value=2.4e-07  Score=61.80  Aligned_cols=77  Identities=14%  Similarity=0.164  Sum_probs=54.5

Q ss_pred             CCCeEEEEccCChhhHH--HHHHHHhCCCeEEEEEcCCCCcccc---------cccc---------cccccccccChHHH
Q 046878            6 TKPKILIFGGTGYLGKY--MVKASVSSGHNTFVYARPVTENSRT---------SKLE---------IHKEFQELDEHEKI   65 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~--l~~~l~~~~~~v~~~~r~~~~~~~~---------~~~~---------~~~~~~d~~~~~~~   65 (104)
                      ..++++||||++.||.+  ++..+.+.|+.|++++|+.......         ....         ......|+.+++++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v  138 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK  138 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence            45789999999999999  9999999999999999875442100         0000         00111288888777


Q ss_pred             HHhh-------ccccEEEEcccCc
Q 046878           66 ISIL-------KEVGVVISTVAYP   82 (104)
Q Consensus        66 ~~~~-------~~~d~vv~~a~~~   82 (104)
                      .+++       ..+|++||++|..
T Consensus       139 ~~~v~~i~~~~G~IDiLVnNAG~~  162 (418)
T 4eue_A          139 DKVIKYIKDEFGKIDLFVYSLAAP  162 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHHHcCCCCEEEECCccc
Confidence            6654       3589999999874

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=98.59  E-value=3.4e-08  Score=63.25  Aligned_cols=40  Identities=18%  Similarity=0.351  Sum_probs=34.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+.+++|.|+|. |.+|..+++.|.+.|++|++++|++++.
T Consensus         6 ~~~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~   45 (306)
T 3l6d_A            6 ESFEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKA   45 (306)
T ss_dssp             CCCSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             ccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            345578999996 9999999999999999999999987544

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.58  E-value=8e-08  Score=63.05  Aligned_cols=76  Identities=14%  Similarity=0.244  Sum_probs=54.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|+ |.+|+.+++.+...|.+|++++|++.+.+.... .. .....+..+.+++.+.+.++|+||++++..
T Consensus       164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g-~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~  240 (369)
T 2eez_A          164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG-GRVITLTATEANIKKSVQHADLLIGAVLVP  240 (369)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-TSEEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC-ceEEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence            44579999998 999999999999999999999998754321111 10 000124456677888889999999999864

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=98.58  E-value=2.1e-07  Score=60.98  Aligned_cols=73  Identities=22%  Similarity=0.202  Sum_probs=46.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |++++|.|+|. |.+|..++..|.+.|++|.+++|++++.+......    .....+.+++.+..+.+|+||.+.+..
T Consensus        20 m~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g----~~~~~s~~e~~~~a~~~DvVi~~vp~~   92 (358)
T 4e21_A           20 FQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALEREG----IAGARSIEEFCAKLVKPRVVWLMVPAA   92 (358)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT----CBCCSSHHHHHHHSCSSCEEEECSCGG
T ss_pred             hcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC----CEEeCCHHHHHhcCCCCCEEEEeCCHH
Confidence            34579999995 99999999999999999999999875442111110    111223333322222337777777654

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=98.57  E-value=7.7e-08  Score=61.61  Aligned_cols=37  Identities=19%  Similarity=0.190  Sum_probs=33.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |++|.++|- |.+|..+++.|+++||+|++++|++++.
T Consensus         3 M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~~   39 (300)
T 3obb_A            3 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAV   39 (300)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             cCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence            458999995 9999999999999999999999987654

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=98.57  E-value=2.5e-07  Score=61.66  Aligned_cols=89  Identities=17%  Similarity=0.226  Sum_probs=65.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChh
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLL   85 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~   85 (104)
                      .++|+|+|+ |.+|+.+++.|.+.|++|+++++++...+............|.++++.+.++ +.++|+||.+.+..  .
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~--~   80 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDP--Q   80 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSH--H
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCCh--H
Confidence            357999997 9999999999999999999999998665322222222223488999999887 88999999988753  3


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                      ....++..+++.+
T Consensus        81 ~n~~i~~~ar~~~   93 (413)
T 3l9w_A           81 TNLQLTEMVKEHF   93 (413)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            3445555666554

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=98.57  E-value=1e-07  Score=72.48  Aligned_cols=78  Identities=12%  Similarity=0.190  Sum_probs=54.5

Q ss_pred             CCCCeEEEEccCCh-hhHHHHHHHHhCCCeEEEEEcCC-CCccc-cc----c-----cccccccccccChHHHHHhhc--
Q 046878            5 NTKPKILIFGGTGY-LGKYMVKASVSSGHNTFVYARPV-TENSR-TS----K-----LEIHKEFQELDEHEKIISILK--   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~-iG~~l~~~l~~~~~~v~~~~r~~-~~~~~-~~----~-----~~~~~~~~d~~~~~~~~~~~~--   70 (104)
                      ++.++++||||+|. ||.++++.|++.|+.|++++++. ..... ..    .     ........|+.|.+++.+++.  
T Consensus       650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i  729 (1878)
T 2uv9_A          650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYI  729 (1878)
T ss_dssp             CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHH
Confidence            45678999999998 99999999999999998886443 22210 00    0     011111138888887777652  


Q ss_pred             ---------cccEEEEcccCc
Q 046878           71 ---------EVGVVISTVAYP   82 (104)
Q Consensus        71 ---------~~d~vv~~a~~~   82 (104)
                               .+|++||+||..
T Consensus       730 ~~~~~~~G~~IDiLVnNAGi~  750 (1878)
T 2uv9_A          730 YDTKNGLGWDLDYVVPFAAIP  750 (1878)
T ss_dssp             HCSSSSCCCCCSEEEECCCCC
T ss_pred             HHhhcccCCCCcEEEeCcccc
Confidence                     589999999964

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=98.55  E-value=2.8e-07  Score=63.98  Aligned_cols=77  Identities=17%  Similarity=0.212  Sum_probs=50.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccc-cChHHHHH----hhccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQEL-DEHEKIIS----ILKEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~-~~~~~~~~----~~~~~d~   74 (104)
                      ++.+.++||||++.||+++++.|.++|++|++.+++.... .....     .......|+ .+.+.+.+    .+.++|+
T Consensus       320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~-~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDi  398 (604)
T 2et6_A          320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATK-TVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDI  398 (604)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHH-HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHH-HHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCE
Confidence            4557899999999999999999999999998887643211 00000     011111255 44343322    2457899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus       399 LVnNAGi~  406 (604)
T 2et6_A          399 LVNNAGIL  406 (604)
T ss_dssp             EEECCCCC
T ss_pred             EEECCCCC
Confidence            99999974

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.54  E-value=2.7e-07  Score=59.52  Aligned_cols=76  Identities=14%  Similarity=0.196  Sum_probs=54.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccc-ccc-------cccccccChHHHHHhhccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKL-EIH-------KEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~-~~~-------~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      ++.++++|+|+ |.+|++++..|.+.|. +|++++|+++..+..... ..+       ....++.+.+++.+.+.++|+|
T Consensus       152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI  230 (315)
T 3tnl_A          152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF  230 (315)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence            45679999997 9999999999999997 899999984322111110 000       0112566667788888899999


Q ss_pred             EEcccC
Q 046878           76 ISTVAY   81 (104)
Q Consensus        76 v~~a~~   81 (104)
                      |++.+.
T Consensus       231 INaTp~  236 (315)
T 3tnl_A          231 TNATGV  236 (315)
T ss_dssp             EECSST
T ss_pred             EECccC
Confidence            999864

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=98.54  E-value=1.8e-07  Score=71.23  Aligned_cols=78  Identities=13%  Similarity=0.207  Sum_probs=54.1

Q ss_pred             CCCCeEEEEccCCh-hhHHHHHHHHhCCCeEEEEE-cCCCCcccc-ccc---------ccccccccccChHHHHHhhc--
Q 046878            5 NTKPKILIFGGTGY-LGKYMVKASVSSGHNTFVYA-RPVTENSRT-SKL---------EIHKEFQELDEHEKIISILK--   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~-iG~~l~~~l~~~~~~v~~~~-r~~~~~~~~-~~~---------~~~~~~~d~~~~~~~~~~~~--   70 (104)
                      ++.++++||||++. ||.++++.|++.|+.|++++ |+....... ...         .......|+.|.+++..++.  
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i  752 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI  752 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence            45678999999998 99999999999999999885 443322110 000         00111128888887776542  


Q ss_pred             -----------cccEEEEcccCc
Q 046878           71 -----------EVGVVISTVAYP   82 (104)
Q Consensus        71 -----------~~d~vv~~a~~~   82 (104)
                                 ++|++||+||..
T Consensus       753 ~~~~~~~G~G~~LDiLVNNAGi~  775 (1887)
T 2uv8_A          753 YDTEKNGGLGWDLDAIIPFAAIP  775 (1887)
T ss_dssp             HSCTTTTSCCCCCSEEEECCCCC
T ss_pred             HHhccccccCCCCeEEEECCCcC
Confidence                       589999999964

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=98.54  E-value=9.1e-08  Score=60.57  Aligned_cols=90  Identities=13%  Similarity=0.199  Sum_probs=50.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHh-CCCeEEEE-EcCCCCcccccccccc--cccccccChHHHHHhhccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVS-SGHNTFVY-ARPVTENSRTSKLEIH--KEFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~-~r~~~~~~~~~~~~~~--~~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      |++++|+|+|++|.+|+.+++.+.+ .++++.++ ++++......+.....  .. .++...+++.+++.++|+|+.++.
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~-~~v~~~~dl~~~l~~~DvVIDft~   81 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGK-TGVTVQSSLDAVKDDFDVFIDFTR   81 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSC-CSCCEESCSTTTTTSCSEEEECSC
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCc-CCceecCCHHHHhcCCCEEEEcCC
Confidence            4556999999999999999998875 45777644 4443221000000000  00 011111223344567899987775


Q ss_pred             CcChhhHHHHHHHHHHhC
Q 046878           81 YPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~   98 (104)
                      +.   .....+..|.+++
T Consensus        82 p~---~~~~~~~~a~~~G   96 (273)
T 1dih_A           82 PE---GTLNHLAFCRQHG   96 (273)
T ss_dssp             HH---HHHHHHHHHHHTT
T ss_pred             hH---HHHHHHHHHHhCC
Confidence            43   3456666666665

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=98.52  E-value=5.2e-07  Score=58.84  Aligned_cols=86  Identities=12%  Similarity=0.089  Sum_probs=52.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcc-cccccccccccc--cccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENS-RTSKLEIHKEFQ--ELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~-~~~~~~~~~~~~--d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++++|+|+||+|++|+.+++.|.+++. +++.+.++..... .......+....  .+.+.+   + +.++|+||.|+|.
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~~~~g~~~~~~~~~~---~-~~~vDvV~~a~g~   78 (345)
T 2ozp_A            3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHPNLRGRTNLKFVPPE---K-LEPADILVLALPH   78 (345)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCGGGTTTCCCBCBCGG---G-CCCCSEEEECCCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCchhcCcccccccchh---H-hcCCCEEEEcCCc
Confidence            346899999999999999999987764 6666655432221 111111111101  122332   2 4789999999987


Q ss_pred             cChhhHHHHHHHHHHhC
Q 046878           82 PQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        82 ~~~~~~~~l~~~~~~~~   98 (104)
                      ..   ...++..+.++|
T Consensus        79 ~~---s~~~a~~~~~aG   92 (345)
T 2ozp_A           79 GV---FAREFDRYSALA   92 (345)
T ss_dssp             TH---HHHTHHHHHTTC
T ss_pred             HH---HHHHHHHHHHCC
Confidence            53   355666666665

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=98.51  E-value=2e-07  Score=61.12  Aligned_cols=88  Identities=14%  Similarity=0.185  Sum_probs=51.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccc-cccccccccc--ccccChHHHHHhhccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSR-TSKLEIHKEF--QELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~-~~~~~~~~~~--~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      |++.+|+|+||+|++|+.+++.|.+++. ++..+.++...... .....+....  .|+...+  .+.+.++|+||.|+|
T Consensus        14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~~~~v~~dl~~~~--~~~~~~vDvVf~atp   91 (359)
T 1xyg_A           14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLVSVK--DADFSTVDAVFCCLP   91 (359)
T ss_dssp             -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGGTTSCCCCCBCGG--GCCGGGCSEEEECCC
T ss_pred             ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchhcCcccccceecc--hhHhcCCCEEEEcCC
Confidence            4556899999999999999999998763 67666554322111 1111111110  1222222  334578999999998


Q ss_pred             CcChhhHHHHHHHHHHhC
Q 046878           81 YPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~   98 (104)
                      ...   +...+..+ +++
T Consensus        92 ~~~---s~~~a~~~-~aG  105 (359)
T 1xyg_A           92 HGT---TQEIIKEL-PTA  105 (359)
T ss_dssp             TTT---HHHHHHTS-CTT
T ss_pred             chh---HHHHHHHH-hCC
Confidence            654   24444444 444

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=98.51  E-value=1.7e-07  Score=60.07  Aligned_cols=39  Identities=21%  Similarity=0.346  Sum_probs=34.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ..+++|.|+|+ |.+|..++..|.+.|++|++++|++++.
T Consensus        19 ~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~   57 (310)
T 3doj_A           19 SHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKC   57 (310)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred             ccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            34579999996 9999999999999999999999987654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=98.50  E-value=9.5e-08  Score=61.63  Aligned_cols=35  Identities=14%  Similarity=-0.008  Sum_probs=30.1

Q ss_pred             CCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            7 KPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .++++|||+++  .||.++++.|+++|++|++.++++
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~   38 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence            46899999864  899999999999999999777554

>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A

Probab=98.50  E-value=1.8e-06  Score=55.66  Aligned_cols=68  Identities=18%  Similarity=0.253  Sum_probs=49.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+.+|++...+.   ..      .....+++.++++++|+|+.+.+..
T Consensus       137 l~g~tvGIiG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~---~~------~~~~~~~l~ell~~aDiV~l~~Plt  204 (315)
T 3pp8_A          137 REEFSVGIMGA-GVLGAKVAESLQAWGFPLRCWSRSRKSWPG---VE------SYVGREELRAFLNQTRVLINLLPNT  204 (315)
T ss_dssp             STTCCEEEECC-SHHHHHHHHHHHTTTCCEEEEESSCCCCTT---CE------EEESHHHHHHHHHTCSEEEECCCCC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEcCCchhhhh---hh------hhcccCCHHHHHhhCCEEEEecCCc
Confidence            45679999996 999999999999999999999988754311   11      1112356677777888887777643

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=98.50  E-value=4.4e-08  Score=62.57  Aligned_cols=43  Identities=19%  Similarity=0.150  Sum_probs=33.1

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |....++++|.|+|+ |.+|..++..|.+.|++|++++|++++.
T Consensus         1 M~~~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~   43 (303)
T 3g0o_A            1 MSLTGTDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQAC   43 (303)
T ss_dssp             ------CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCCCCCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            443334578999996 9999999999999999999999987543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=98.49  E-value=3.3e-07  Score=65.39  Aligned_cols=77  Identities=22%  Similarity=0.359  Sum_probs=55.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHH-hCCC-eEEEEEcCCCCcccccc----c-----ccccccccccChHHHHHhhc-----
Q 046878            7 KPKILIFGGTGYLGKYMVKASV-SSGH-NTFVYARPVTENSRTSK----L-----EIHKEFQELDEHEKIISILK-----   70 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~-~~~~-~v~~~~r~~~~~~~~~~----~-----~~~~~~~d~~~~~~~~~~~~-----   70 (104)
                      .++++|+|++|.+|+++++.|. ++|. .+++++|+....+....    .     .......|+.|.+++.++++     
T Consensus       530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~  609 (795)
T 3slk_A          530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDE  609 (795)
T ss_dssp             TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Confidence            4689999999999999999999 7897 58888988433211110    0     01111128999998888774     


Q ss_pred             -cccEEEEcccCcC
Q 046878           71 -EVGVVISTVAYPQ   83 (104)
Q Consensus        71 -~~d~vv~~a~~~~   83 (104)
                       .+|++||+||...
T Consensus       610 ~~id~lVnnAGv~~  623 (795)
T 3slk_A          610 HPLTAVVHAAGVLD  623 (795)
T ss_dssp             SCEEEEEECCCCCC
T ss_pred             CCCEEEEECCCcCC
Confidence             4699999999754

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=98.47  E-value=1.7e-07  Score=58.23  Aligned_cols=78  Identities=15%  Similarity=0.139  Sum_probs=50.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC--ccccc-------ccccccccccccChHHHHHhhccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE--NSRTS-------KLEIHKEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~--~~~~~-------~~~~~~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      +..++|.|+|+ |.+|.+++..|.+.|++|++++|+++.  .....       ......... .....+..++++++|+|
T Consensus        17 ~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e~~~~aDvV   94 (245)
T 3dtt_A           17 FQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHP-HVHLAAFADVAAGAELV   94 (245)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGST-TCEEEEHHHHHHHCSEE
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcC-ceeccCHHHHHhcCCEE
Confidence            45679999995 999999999999999999999998754  10000       000000000 01122345567789999


Q ss_pred             EEcccCcCh
Q 046878           76 ISTVAYPQL   84 (104)
Q Consensus        76 v~~a~~~~~   84 (104)
                      |.+.+....
T Consensus        95 ilavp~~~~  103 (245)
T 3dtt_A           95 VNATEGASS  103 (245)
T ss_dssp             EECSCGGGH
T ss_pred             EEccCcHHH
Confidence            999987653

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.46  E-value=2.4e-07  Score=60.38  Aligned_cols=77  Identities=18%  Similarity=0.233  Sum_probs=50.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc----ccccccccccccccChHHHHHhhccccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR----TSKLEIHKEFQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      |.++||.|+|++|++|+.++..++..|  .++.+++++.++.+.    ..... ... .++.-...+.++++++|+||.+
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~-~~~-~~i~~t~d~~~al~dADvVvit   83 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG-FEG-LNLTFTSDIKEALTDAKYIVSS   83 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC-CTT-CCCEEESCHHHHHTTEEEEEEC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc-CCC-CceEEcCCHHHHhCCCCEEEEc
Confidence            556799999988999999999998887  479998886543211    01100 000 1121123456778999999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      +|.+.
T Consensus        84 aG~p~   88 (343)
T 3fi9_A           84 GGAPR   88 (343)
T ss_dssp             CC---
T ss_pred             cCCCC
Confidence            98764

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.46  E-value=9.4e-08  Score=62.06  Aligned_cols=92  Identities=11%  Similarity=0.050  Sum_probs=57.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC--e-----EEEEEcCCC--Cccc-ccccccc--cccccccChHHHHHhhccccE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH--N-----TFVYARPVT--ENSR-TSKLEIH--KEFQELDEHEKIISILKEVGV   74 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~-----v~~~~r~~~--~~~~-~~~~~~~--~~~~d~~~~~~~~~~~~~~d~   74 (104)
                      ++||.|+||+|++|++++..|...+.  +     +.++++.+.  ..+. .....+.  +...++...+...+.++++|+
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~~~~~~~~~~daDv   82 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLDV   82 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCSE
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEEcCCcHHHhCCCCE
Confidence            45899999999999999999987664  4     778877542  1100 0000000  001122223345777999999


Q ss_pred             EEEcccCcC-------------hhhHHHHHHHHHHhC
Q 046878           75 VISTVAYPQ-------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        75 vv~~a~~~~-------------~~~~~~l~~~~~~~~   98 (104)
                      ||+++|.+.             ......+++.+.+.+
T Consensus        83 VvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~  119 (333)
T 5mdh_A           83 AILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA  119 (333)
T ss_dssp             EEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999998753             223456666776665

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=98.45  E-value=1.6e-07  Score=57.54  Aligned_cols=39  Identities=13%  Similarity=0.217  Sum_probs=33.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEE-EEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFV-YARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~-~~r~~~~~   44 (104)
                      |++++|.|+|+ |.+|.++++.|.+.|++|.+ ++|++++.
T Consensus        21 m~mmkI~IIG~-G~mG~~la~~l~~~g~~V~~v~~r~~~~~   60 (220)
T 4huj_A           21 QSMTTYAIIGA-GAIGSALAERFTAAQIPAIIANSRGPASL   60 (220)
T ss_dssp             GGSCCEEEEEC-HHHHHHHHHHHHHTTCCEEEECTTCGGGG
T ss_pred             hcCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCCHHHH
Confidence            45679999995 99999999999999999988 77776544

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=98.45  E-value=3.8e-07  Score=58.33  Aligned_cols=75  Identities=16%  Similarity=0.144  Sum_probs=52.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|+ |.+|++++..|.+.|. +|++++|+.++.+... ......  .+..+.+++.+.+.++|+||++++..
T Consensus       139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHhhhccCCEEEECCCCC
Confidence            45678999997 8999999999999997 8999999865431111 100000  01223356777788999999999753

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.44  E-value=1.4e-07  Score=59.79  Aligned_cols=77  Identities=16%  Similarity=0.217  Sum_probs=50.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-c-----------cccc--c----ccccChHHHH
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-E-----------IHKE--F----QELDEHEKII   66 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~-----------~~~~--~----~d~~~~~~~~   66 (104)
                      |++++|.|+|+ |.+|..++..|...|++|++++++++..+..... .           ....  .    ..+.-..++.
T Consensus         2 m~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~   80 (283)
T 4e12_A            2 TGITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLA   80 (283)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHH
Confidence            34579999997 9999999999999999999999987554211100 0           0000  0    0011123445


Q ss_pred             HhhccccEEEEcccCc
Q 046878           67 SILKEVGVVISTVAYP   82 (104)
Q Consensus        67 ~~~~~~d~vv~~a~~~   82 (104)
                      ++++++|+||.+.+..
T Consensus        81 ~~~~~aDlVi~av~~~   96 (283)
T 4e12_A           81 QAVKDADLVIEAVPES   96 (283)
T ss_dssp             HHTTTCSEEEECCCSC
T ss_pred             HHhccCCEEEEeccCc
Confidence            6678899999988864

>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}

Probab=98.43  E-value=3e-06  Score=54.83  Aligned_cols=68  Identities=16%  Similarity=0.280  Sum_probs=50.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+.+|++......   .      ......++.++++++|+|+.+.+..
T Consensus       138 l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~---~------~~~~~~~l~ell~~aDvV~l~lPlt  205 (324)
T 3hg7_A          138 LKGRTLLILGT-GSIGQHIAHTGKHFGMKVLGVSRSGRERAGF---D------QVYQLPALNKMLAQADVIVSVLPAT  205 (324)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCTTC---S------EEECGGGHHHHHHTCSEEEECCCCC
T ss_pred             cccceEEEEEE-CHHHHHHHHHHHhCCCEEEEEcCChHHhhhh---h------cccccCCHHHHHhhCCEEEEeCCCC
Confidence            45689999996 9999999999999999999999886433111   0      1112345677788888888887643

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=98.43  E-value=2e-07  Score=59.01  Aligned_cols=36  Identities=22%  Similarity=0.307  Sum_probs=32.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ++|.|+|+ |.+|..++..|.+.|++|++++|++++.
T Consensus         2 ~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~   37 (287)
T 3pdu_A            2 TTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKC   37 (287)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGG
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            58999995 9999999999999999999999987654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.43  E-value=4.2e-08  Score=56.26  Aligned_cols=72  Identities=21%  Similarity=0.184  Sum_probs=49.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      .++++|+|+ |.+|+.+++.|...|++|.+++|++++.+...  ....  .+....+++.+.+.++|+||.+++...
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a--~~~~--~~~~~~~~~~~~~~~~Divi~at~~~~   92 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFA--EKYE--YEYVLINDIDSLIKNNDVIITATSSKT   92 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHH--HHHT--CEEEECSCHHHHHHTCSEEEECSCCSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHH--HHhC--CceEeecCHHHHhcCCCEEEEeCCCCC
Confidence            468999996 99999999999998988888888865442111  0010  011122344566788999999998754

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=98.42  E-value=9.4e-07  Score=56.04  Aligned_cols=69  Identities=20%  Similarity=0.117  Sum_probs=50.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +.++++|+|+ |.+|++++..|.+.|. +|++++|+.++.+....  ..    .....+++.+.+.++|+||++.+.
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--~~----~~~~~~~~~~~~~~aDiVInaTp~  185 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--NI----NKINLSHAESHLDEFDIIINTTPA  185 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--CC----EEECHHHHHHTGGGCSEEEECCC-
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--hc----ccccHhhHHHHhcCCCEEEECccC
Confidence            4578999997 9999999999999998 89999998765422111  11    112345566778899999999764

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=98.41  E-value=8.3e-07  Score=56.22  Aligned_cols=71  Identities=17%  Similarity=0.185  Sum_probs=48.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++++|.|+|+ |.+|.+++..|.+.|+   +|.+++|+++..+.....  .. +.-.   .+..++++++|+||-+..+.
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~--~g-i~~~---~~~~~~~~~aDvVilav~p~   74 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK--CG-VHTT---QDNRQGALNADVVVLAVKPH   74 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT--TC-CEEE---SCHHHHHSSCSEEEECSCGG
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH--cC-CEEe---CChHHHHhcCCeEEEEeCHH
Confidence            4578999997 9999999999999998   899999987654221110  00 0111   12345567888888888654


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        75 ~   75 (280)
T 3tri_A           75 Q   75 (280)
T ss_dssp             G
T ss_pred             H
Confidence            3

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.41  E-value=3.3e-07  Score=54.95  Aligned_cols=75  Identities=20%  Similarity=0.283  Sum_probs=49.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccCh---HHHHHhhc--cccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEH---EKIISILK--EVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~--~~d~vv~~a~   80 (104)
                      ..++++|+||+|.+|..+++.+...|.+|+++++++++.+....... ....|+.+.   +.+.+...  ++|++|+++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~-~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  116 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV-EYVGDSRSVDFADEILELTDGYGVDVVLNSLA  116 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC-SEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC-CEEeeCCcHHHHHHHHHHhCCCCCeEEEECCc
Confidence            34689999999999999999999889999999887654321111111 111234333   23333332  5899999998


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       117 ~  117 (198)
T 1pqw_A          117 G  117 (198)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=98.41  E-value=2.1e-06  Score=54.79  Aligned_cols=64  Identities=14%  Similarity=0.244  Sum_probs=45.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..+++.|+|. |.+|+.+++.|...|++|.+++|++...+.      ..      ..+++.++++++|+|+.+.+.
T Consensus       120 l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~------~~~~l~ell~~aDiV~l~~P~  183 (290)
T 3gvx_A          120 LYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV------ISESPADLFRQSDFVLIAIPL  183 (290)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE------ECSSHHHHHHHCSEEEECCCC
T ss_pred             eecchheeecc-CchhHHHHHHHHhhCcEEEEEecccccccc------cc------ccCChHHHhhccCeEEEEeec
Confidence            45679999996 999999999999999999999988654311      00      112344555666666666654

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=98.41  E-value=4.1e-07  Score=57.63  Aligned_cols=36  Identities=25%  Similarity=0.388  Sum_probs=32.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ++|.|+|+ |.+|..++..|.+.|++|++++|++++.
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~   37 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKA   37 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGG
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            58999996 9999999999999999999999987654

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}

Probab=98.40  E-value=2.6e-06  Score=55.10  Aligned_cols=67  Identities=12%  Similarity=0.210  Sum_probs=47.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+++|++...+....         ....+++.++++++|+|+.+.+.
T Consensus       135 l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~---------~~~~~~l~ell~~aDvV~l~lPl  201 (324)
T 3evt_A          135 LTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGHPADHFHE---------TVAFTATADALATANFIVNALPL  201 (324)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCCCCTTCSE---------EEEGGGCHHHHHHCSEEEECCCC
T ss_pred             ccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcchhHhHhh---------ccccCCHHHHHhhCCEEEEcCCC
Confidence            45689999996 999999999999999999999988654311110         01123345556677777776654

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=98.39  E-value=2.7e-06  Score=55.34  Aligned_cols=85  Identities=14%  Similarity=0.181  Sum_probs=50.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC---eEEEEE-cCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH---NTFVYA-RPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++|+|+||+|++|+.+++.|.++++   ++..+. ++.... ... .... .+ .+.+.+ . ..+.++|+||.|+|..
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~-~~~-~~g~-~i-~~~~~~-~-~~~~~~DvV~~a~g~~   79 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQ-RMG-FAES-SL-RVGDVD-S-FDFSSVGLAFFAAAAE   79 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTC-EEE-ETTE-EE-ECEEGG-G-CCGGGCSEEEECSCHH
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCC-ccc-cCCc-ce-EEecCC-H-HHhcCCCEEEEcCCcH
Confidence            36899999999999999999986654   455544 322111 000 1000 00 111111 0 1256899999999854


Q ss_pred             ChhhHHHHHHHHHHhCCcc
Q 046878           83 QLLDQLKIVDAIKVAGNIK  101 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~~v~  101 (104)
                         ....++..+.+++ ++
T Consensus        80 ---~s~~~a~~~~~aG-~k   94 (340)
T 2hjs_A           80 ---VSRAHAERARAAG-CS   94 (340)
T ss_dssp             ---HHHHHHHHHHHTT-CE
T ss_pred             ---HHHHHHHHHHHCC-CE
Confidence               2456666776766 44

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=98.39  E-value=1e-06  Score=54.90  Aligned_cols=65  Identities=12%  Similarity=0.218  Sum_probs=46.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      |++++|.|+|+ |.+|..++..|.+.|    ++|.+++|+++..    .   .   ....+   ..+.+.++|+||.+.+
T Consensus         2 m~~m~i~iiG~-G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~~~----g---~---~~~~~---~~~~~~~~D~vi~~v~   67 (262)
T 2rcy_A            2 MENIKLGFMGL-GQMGSALAHGIANANIIKKENLFYYGPSKKNT----T---L---NYMSS---NEELARHCDIIVCAVK   67 (262)
T ss_dssp             CSSSCEEEECC-SHHHHHHHHHHHHHTSSCGGGEEEECSSCCSS----S---S---EECSC---HHHHHHHCSEEEECSC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCCCCCeEEEEeCCcccC----c---e---EEeCC---HHHHHhcCCEEEEEeC
Confidence            34568999997 999999999999988    6899998887541    0   0   11112   2344567888888887


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      +..
T Consensus        68 ~~~   70 (262)
T 2rcy_A           68 PDI   70 (262)
T ss_dssp             TTT
T ss_pred             HHH
Confidence            543

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=98.38  E-value=1.9e-07  Score=62.96  Aligned_cols=73  Identities=11%  Similarity=0.208  Sum_probs=57.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHh-hccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~   81 (104)
                      |+|+|.|+ |.+|+.+++.|...|++|++++++++..+.. +..+......|.++++.|.++ +.++|+++.+.+.
T Consensus         4 M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~   78 (461)
T 4g65_A            4 MKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNT   78 (461)
T ss_dssp             EEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCC
Confidence            58999997 9999999999999999999999987665322 122222223489999999888 7899998877664

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=98.38  E-value=5.1e-07  Score=57.52  Aligned_cols=37  Identities=19%  Similarity=0.159  Sum_probs=33.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +++|.|+|. |.+|..++..|.+.|++|++++|++++.
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~   51 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAM   51 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence            358999996 9999999999999999999999988765

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=98.37  E-value=3.6e-07  Score=58.86  Aligned_cols=37  Identities=24%  Similarity=0.351  Sum_probs=33.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +++|.|+|+ |.+|..++..|.+.|++|++++|++++.
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~   67 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARA   67 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence            468999996 9999999999999999999999987544

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=98.37  E-value=5.9e-07  Score=58.87  Aligned_cols=85  Identities=13%  Similarity=0.172  Sum_probs=48.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCC-ccccccccc-----cc----c--cccccChHHHHHhhccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTE-NSRTSKLEI-----HK----E--FQELDEHEKIISILKEV   72 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~-~~~~~~~~~-----~~----~--~~d~~~~~~~~~~~~~~   72 (104)
                      ++.++.|+||||++|+.+++.|.++.+ ++..+..+... ........+     ++    +  +.++ +++    .+.++
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~-~~~----~~~~v   80 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT-DPK----LMDDV   80 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC-CGG----GCTTC
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC-CHH----HhcCC
Confidence            345899999999999999998877653 55554433222 111111010     00    0  1111 222    24689


Q ss_pred             cEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           73 GVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        73 d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      |+||.|+|...   ...++..+.+++
T Consensus        81 Dvvf~a~p~~~---s~~~a~~~~~~G  103 (359)
T 4dpk_A           81 DIIFSPLPQGA---AGPVEEQFAKEG  103 (359)
T ss_dssp             CEEEECCCTTT---HHHHHHHHHHTT
T ss_pred             CEEEECCChHH---HHHHHHHHHHCC
Confidence            99999998754   245555555555

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=98.37  E-value=5.9e-07  Score=58.87  Aligned_cols=85  Identities=13%  Similarity=0.172  Sum_probs=48.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCC-ccccccccc-----cc----c--cccccChHHHHHhhccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTE-NSRTSKLEI-----HK----E--FQELDEHEKIISILKEV   72 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~-~~~~~~~~~-----~~----~--~~d~~~~~~~~~~~~~~   72 (104)
                      ++.++.|+||||++|+.+++.|.++.+ ++..+..+... ........+     ++    +  +.++ +++    .+.++
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~-~~~----~~~~v   80 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT-DPK----LMDDV   80 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC-CGG----GCTTC
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC-CHH----HhcCC
Confidence            345899999999999999998877653 55554433222 111111010     00    0  1111 222    24689


Q ss_pred             cEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           73 GVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        73 d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      |+||.|+|...   ...++..+.+++
T Consensus        81 Dvvf~a~p~~~---s~~~a~~~~~~G  103 (359)
T 4dpl_A           81 DIIFSPLPQGA---AGPVEEQFAKEG  103 (359)
T ss_dssp             CEEEECCCTTT---HHHHHHHHHHTT
T ss_pred             CEEEECCChHH---HHHHHHHHHHCC
Confidence            99999998754   245555555555

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.36  E-value=3.1e-07  Score=57.94  Aligned_cols=74  Identities=12%  Similarity=0.167  Sum_probs=48.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++.++++|+|+ |.+|++++..|.+.|.+|++++|+.++.+.. ......... +..+.+++.+  .++|+||+++|..
T Consensus       117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~-~~~~~~~~~~--~~~DivVn~t~~~  191 (271)
T 1nyt_A          117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSI-QALSMDELEG--HEFDLIINATSSG  191 (271)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSE-EECCSGGGTT--CCCSEEEECCSCG
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCe-eEecHHHhcc--CCCCEEEECCCCC
Confidence            45678999998 8999999999999999999999886543111 111100000 1122222222  5899999999854

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=98.36  E-value=7.2e-07  Score=60.53  Aligned_cols=77  Identities=17%  Similarity=0.210  Sum_probs=49.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccc-ccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK-EFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |.+++|.|+|. |.+|.+++..|.+.|++|.+.+|++++.+......... .+.-..+++++.+.++++|+|+.+.+..
T Consensus         2 ~~~~kIgiIGl-G~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVil~Vp~~   79 (484)
T 4gwg_A            2 NAQADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVVGAQSLKEMVSKLKKPRRIILLVKAG   79 (484)
T ss_dssp             -CCBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred             CCCCEEEEECh-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcccCCCceeccCCHHHHHhhccCCCEEEEecCCh
Confidence            34568999996 99999999999999999999999876542211110000 0111234444444455677777777664

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=98.36  E-value=5.4e-07  Score=54.97  Aligned_cols=68  Identities=21%  Similarity=0.238  Sum_probs=47.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++|+|+| +|.+|+.+++.|...|++|.+++|+++..+...... .   . ..   ++.+++.++|+||.+.+...
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g-~---~-~~---~~~~~~~~~DvVi~av~~~~   95 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPSA-A---Q-VT---FQEEAVSSPEVIFVAVFREH   95 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBTT-S---E-EE---EHHHHTTSCSEEEECSCGGG
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-C---c-ee---cHHHHHhCCCEEEECCChHH
Confidence            46899999 499999999999999999999998865431111100 0   1 11   34556778899998888643

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=98.36  E-value=2e-07  Score=59.05  Aligned_cols=68  Identities=16%  Similarity=0.209  Sum_probs=48.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++|.|+|++|.+|..++..|...|++|++++|+++..+......    + +..+   ..+.+.++|+||.+.+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~g----~-~~~~---~~~~~~~aDvVi~av~~~~   79 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGMG----I-PLTD---GDGWIDEADVVVLALPDNI   79 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHTT----C-CCCC---SSGGGGTCSEEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhcC----C-CcCC---HHHHhcCCCEEEEcCCchH
Confidence            58999998799999999999999999999988765432111111    1 1111   2345678999999988653

>1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A*

Probab=98.34  E-value=1.1e-05  Score=53.08  Aligned_cols=83  Identities=11%  Similarity=0.209  Sum_probs=48.5

Q ss_pred             CeEEEEccCChhhHHHHHH-HHhCCC---eEEEEEcCCCCcccccccc-cccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKA-SVSSGH---NTFVYARPVTENSRTSKLE-IHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~-l~~~~~---~v~~~~r~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++|.|+||+|++|+.+++. |.++++   .++.+..+.... ...... ....+.+..+++.    ++++|+||.|+|..
T Consensus         2 ~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G~-~v~~~~g~~i~~~~~~~~~~----~~~~DvVf~a~g~~   76 (367)
T 1t4b_A            2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQ-AAPSFGGTTGTLQDAFDLEA----LKALDIIVTCQGGD   76 (367)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTS-BCCGGGTCCCBCEETTCHHH----HHTCSEEEECSCHH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCCC-CccccCCCceEEEecCChHH----hcCCCEEEECCCch
Confidence            5899999999999999995 444443   345554442111 111011 1111123334433    35899999999853


Q ss_pred             ChhhHHHHHHHHHHhC
Q 046878           83 QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~   98 (104)
                         .....+..+.++|
T Consensus        77 ---~s~~~a~~~~~~G   89 (367)
T 1t4b_A           77 ---YTNEIYPKLRESG   89 (367)
T ss_dssp             ---HHHHHHHHHHHTT
T ss_pred             ---hHHHHHHHHHHCC
Confidence               3456666666666

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=98.34  E-value=3.5e-07  Score=59.29  Aligned_cols=78  Identities=12%  Similarity=0.062  Sum_probs=49.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-cc-cccc-----ccc-cChHHHHHhhccccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EI-HKEF-----QEL-DEHEKIISILKEVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~-~~~~-----~d~-~~~~~~~~~~~~~d~vv   76 (104)
                      |++++|+|+|+ |.+|..++..|...|++|++++|+++..+..... .. ....     ..+ ...+++.+++.++|+||
T Consensus         2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi   80 (359)
T 1bg6_A            2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVIL   80 (359)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEE
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEE
Confidence            44579999997 9999999999999999999999876543211110 00 0000     001 01123445567889999


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      .+.+...
T Consensus        81 ~~v~~~~   87 (359)
T 1bg6_A           81 IVVPAIH   87 (359)
T ss_dssp             ECSCGGG
T ss_pred             EeCCchH
Confidence            8888654

>3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis}

Probab=98.33  E-value=8.3e-06  Score=53.78  Aligned_cols=85  Identities=12%  Similarity=0.218  Sum_probs=48.8

Q ss_pred             CCeEEEEccCChhhHHHHH-HHHhCCC---eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVK-ASVSSGH---NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~-~l~~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++++.|+||||++|+.+++ .|.++.+   ++..++.+.......+.......+.+..+++.    +.++|+||.|+|..
T Consensus         4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~v~~~~~~~~----~~~vDvvf~a~~~~   79 (377)
T 3uw3_A            4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAGGKAPSFAKNETTLKDATSIDD----LKKCDVIITCQGGD   79 (377)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTTSBCCTTCCSCCBCEETTCHHH----HHTCSEEEECSCHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcCCCHHHcCCCceEEEeCCChhH----hcCCCEEEECCChH
Confidence            4689999999999999999 6666653   45554433211111110000011123333332    46899999998854


Q ss_pred             ChhhHHHHHHHHHHhC
Q 046878           83 QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~   98 (104)
                      .   ....+..+.+++
T Consensus        80 ~---s~~~~~~~~~~G   92 (377)
T 3uw3_A           80 Y---TNDVFPKLRAAG   92 (377)
T ss_dssp             H---HHHHHHHHHHTT
T ss_pred             H---HHHHHHHHHHCC
Confidence            3   345555555565

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=98.33  E-value=2.1e-07  Score=59.26  Aligned_cols=75  Identities=17%  Similarity=0.097  Sum_probs=47.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc--ccc--c----cccccChHHHHHhhccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE--IHK--E----FQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~--~~~--~----~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      +++|.|+|+ |.+|..++..|.+.|++|++++|+++..+......  ...  .    ..+..+.+++.+.++++|+||.+
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~   81 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIAL   81 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEEC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEEE
Confidence            368999997 99999999999999999999999765432111100  000  0    00111222233334578999988


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      .+..
T Consensus        82 v~~~   85 (316)
T 2ew2_A           82 TKAQ   85 (316)
T ss_dssp             SCHH
T ss_pred             eccc
Confidence            8754

>3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A

Probab=98.33  E-value=4.3e-06  Score=54.99  Aligned_cols=84  Identities=14%  Similarity=0.177  Sum_probs=48.0

Q ss_pred             CeEEEEccCChhhHHHHH-HHHhCCC---eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVK-ASVSSGH---NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~-~l~~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++.|+||||++|+.+++ .|.++.+   ++..++.+.......+.......+.+..+++.    +.++|+||.|+|...
T Consensus         1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG~~~~~~~~~~~~~~~~~~~~~----~~~~Dvvf~a~~~~~   76 (370)
T 3pzr_A            1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFDIES----LKQLDAVITCQGGSY   76 (370)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCCSSSCCCBCEETTCHHH----HTTCSEEEECSCHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccCcCHHHhCCCceEEEecCChhH----hccCCEEEECCChHH
Confidence            479999999999999999 6666653   45544433222111110000111123333332    578999999988642


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                         ....+..+.+++
T Consensus        77 ---s~~~~~~~~~~G   88 (370)
T 3pzr_A           77 ---TEKVYPALRQAG   88 (370)
T ss_dssp             ---HHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHCC
Confidence               345555555555

>3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans}

Probab=98.32  E-value=4.9e-07  Score=59.65  Aligned_cols=88  Identities=16%  Similarity=0.129  Sum_probs=49.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEE--cCCCCcccccccccc---------c--ccccccChHHHHHhh
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYA--RPVTENSRTSKLEIH---------K--EFQELDEHEKIISIL   69 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~--r~~~~~~~~~~~~~~---------~--~~~d~~~~~~~~~~~   69 (104)
                      .|++.+|.|+||||++|+.+++.|.++.+ ++..+.  ++.......+...+.         .  .+.+....    +.+
T Consensus        16 ~M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~~~----~~~   91 (381)
T 3hsk_A           16 HMSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECKPE----GNF   91 (381)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESSSC----TTG
T ss_pred             cCCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCchh----hhc
Confidence            36667899999999999999998887653 564442  322111111111111         0  01122211    135


Q ss_pred             ccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           70 KEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        70 ~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      .++|+||.|+|...   ...++..+.+++
T Consensus        92 ~~~Dvvf~alp~~~---s~~~~~~~~~~G  117 (381)
T 3hsk_A           92 LECDVVFSGLDADV---AGDIEKSFVEAG  117 (381)
T ss_dssp             GGCSEEEECCCHHH---HHHHHHHHHHTT
T ss_pred             ccCCEEEECCChhH---HHHHHHHHHhCC
Confidence            78999999988543   345555555555

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.32  E-value=1e-06  Score=57.71  Aligned_cols=75  Identities=23%  Similarity=0.320  Sum_probs=53.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc-ccccChHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +.++++|+|+ |.+|+.+++.+...|.+|++++|++++.+...... ...+ ....+.+.+.+.+.++|+||++++.+
T Consensus       166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~  241 (361)
T 1pjc_A          166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLF-GSRVELLYSNSAEIETAVAEADLLIGAVLVP  241 (361)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-GGGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhh-CceeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence            4579999998 99999999999999999999999875542211110 0000 01124456777788999999999764

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=98.32  E-value=5.3e-07  Score=61.09  Aligned_cols=77  Identities=13%  Similarity=0.145  Sum_probs=47.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |++++|.|+|+ |.+|++++..|.++|++|.+++|++++.+.......-..+....+++++.+.++++|+||.+.+..
T Consensus        13 ~~~~~IgvIGl-G~MG~~lA~~La~~G~~V~v~~r~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVil~Vp~~   89 (480)
T 2zyd_A           13 MSKQQIGVVGM-AVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAG   89 (480)
T ss_dssp             --CBSEEEECC-SHHHHHHHHHHHTTTCCEEEECSSHHHHHHHHHHSTTSCEEECSSHHHHHHTBCSSCEEEECSCSS
T ss_pred             cCCCeEEEEcc-HHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHhhCCCCCeEEeCCHHHHHhCCCCCCEEEEECCCH
Confidence            66779999996 999999999999999999999998755421111000001111223333333333477777777664

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.32  E-value=1e-06  Score=57.14  Aligned_cols=75  Identities=15%  Similarity=0.140  Sum_probs=50.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-----cccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-----EVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vv~~a~   80 (104)
                      ..++++|+|++|.+|..+++.+...|.+|+++++++++.+....... ....|+.+.+++.+.+.     ++|+||+++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~-~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g  247 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG-EVFIDFTKEKDIVGAVLKATDGGAHGVINVSV  247 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC-CEEEETTTCSCHHHHHHHHHTSCEEEEEECSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC-ceEEecCccHhHHHHHHHHhCCCCCEEEECCC
Confidence            34689999999999999999999999999999988765422211111 11124443233333322     5899999998


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       248 ~  248 (347)
T 2hcy_A          248 S  248 (347)
T ss_dssp             C
T ss_pred             c
Confidence            5

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.32  E-value=9.8e-07  Score=58.10  Aligned_cols=76  Identities=13%  Similarity=0.202  Sum_probs=53.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|+ |.+|+.+++.+...|.+|+++++++...+.... .. .....+..+.+++.+.+.++|+||.+++.+
T Consensus       166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g-~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p  242 (377)
T 2vhw_A          166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC-GRIHTRYSSAYELEGAVKRADLVIGAVLVP  242 (377)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-TSSEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC-CeeEeccCCHHHHHHHHcCCCEEEECCCcC
Confidence            45679999997 999999999999999999999988754311111 00 000012234556777888999999988754

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=98.32  E-value=3.9e-07  Score=59.63  Aligned_cols=75  Identities=15%  Similarity=0.170  Sum_probs=50.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc----ccccccc---cccChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL----EIHKEFQ---ELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~----~~~~~~~---d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      +++|.|+|+ |.+|.+++..|.++|++|.+++|+++..+.....    ...+.+.   .+.-..++.++++++|+||.+.
T Consensus        29 ~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVilaV  107 (356)
T 3k96_A           29 KHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDILIVV  107 (356)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEECC
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEEEECC
Confidence            468999997 9999999999999999999999986543211110    0011000   1111234566778899999988


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      +..
T Consensus       108 p~~  110 (356)
T 3k96_A          108 PSF  110 (356)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            764

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=98.31  E-value=2.1e-06  Score=54.78  Aligned_cols=35  Identities=31%  Similarity=0.377  Sum_probs=31.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ++|.|+|+.|.+|..++..|.+.|++|.+++|++.
T Consensus        22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~   56 (298)
T 2pv7_A           22 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDW   56 (298)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence            58999995599999999999999999999988753

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.31  E-value=5.6e-06  Score=54.76  Aligned_cols=77  Identities=10%  Similarity=0.075  Sum_probs=53.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHH-hCCCeEEEEEcCCCCcccc-cc------------c-----ccccccccccChHHHH
Q 046878            6 TKPKILIFGGTGYLGKYMVKASV-SSGHNTFVYARPVTENSRT-SK------------L-----EIHKEFQELDEHEKII   66 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~-~~~~~v~~~~r~~~~~~~~-~~------------~-----~~~~~~~d~~~~~~~~   66 (104)
                      .+++++|+|++..+|.+.+..|. ..|..+.++++..+..+.. ..            .     .......|+.+++.+.
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~  128 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKA  128 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHH
Confidence            46899999999999999999887 6788888888765443211 00            0     0001112888877666


Q ss_pred             Hhh-------ccccEEEEcccCc
Q 046878           67 SIL-------KEVGVVISTVAYP   82 (104)
Q Consensus        67 ~~~-------~~~d~vv~~a~~~   82 (104)
                      +.+       .++|++||+++.+
T Consensus       129 ~vi~~i~~~~G~IDiLVhS~A~~  151 (401)
T 4ggo_A          129 QVIEEAKKKGIKFDLIVYSLASP  151 (401)
T ss_dssp             HHHHHHHHTTCCEEEEEECCCCS
T ss_pred             HHHHHHHHhcCCCCEEEEecccc
Confidence            654       4689999999965

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=98.30  E-value=1.4e-06  Score=49.84  Aligned_cols=37  Identities=19%  Similarity=0.286  Sum_probs=29.6

Q ss_pred             CCCCeEEEEccC---ChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            5 NTKPKILIFGGT---GYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         5 ~~~~~i~i~Ga~---G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ...++|.|+|++   |.+|..+++.|.+.|++|+.++.+.
T Consensus        12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~   51 (138)
T 1y81_A           12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY   51 (138)
T ss_dssp             --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC
Confidence            345789999986   8999999999999999877666553

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=98.30  E-value=3.2e-06  Score=57.16  Aligned_cols=87  Identities=16%  Similarity=0.149  Sum_probs=55.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-C---eEEEEEcCCCCccccccccccccccc--ccChHH-HHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-H---NTFVYARPVTENSRTSKLEIHKEFQE--LDEHEK-IISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~---~v~~~~r~~~~~~~~~~~~~~~~~~d--~~~~~~-~~~~~~~~d~vv~~a~   80 (104)
                      ++|+|+|+ |.+|+.++..|.++. .   .|++++......+............+  -.+.++ +..++++.|+|+|++.
T Consensus        14 ~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aLl~~~DvVIN~s~   92 (480)
T 2ph5_A           14 NRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGSTLEENDFLIDVSI   92 (480)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGGCCTTCEEEECCS
T ss_pred             CCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHHhcCCCEEEECCc
Confidence            58999996 999999999998764 4   58887765543311111111011112  333333 4556776799999775


Q ss_pred             CcChhhHHHHHHHHHHhC
Q 046878           81 YPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        81 ~~~~~~~~~l~~~~~~~~   98 (104)
                      +.   ....++++|.++|
T Consensus        93 ~~---~~l~Im~acleaG  107 (480)
T 2ph5_A           93 GI---SSLALIILCNQKG  107 (480)
T ss_dssp             SS---CHHHHHHHHHHHT
T ss_pred             cc---cCHHHHHHHHHcC
Confidence            54   3478899999887

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=98.30  E-value=2.2e-07  Score=58.16  Aligned_cols=75  Identities=16%  Similarity=0.225  Sum_probs=46.9

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcc
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      |...+.+++|.|+|+ |.+|..++..|...|++ |.+++|+++..+.....  .. +.-..+   +.+++.++|+||.+.
T Consensus         4 m~~~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~--~g-~~~~~~---~~~~~~~~Dvvi~av   76 (266)
T 3d1l_A            4 MKRSIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQK--VE-AEYTTD---LAEVNPYAKLYIVSL   76 (266)
T ss_dssp             ---CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH--TT-CEEESC---GGGSCSCCSEEEECC
T ss_pred             hhcCCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH--cC-CceeCC---HHHHhcCCCEEEEec
Confidence            333344568999997 99999999999999988 78888876543111110  00 001112   233456788888888


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      +..
T Consensus        77 ~~~   79 (266)
T 3d1l_A           77 KDS   79 (266)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            765

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.30  E-value=6.5e-07  Score=57.68  Aligned_cols=75  Identities=9%  Similarity=0.065  Sum_probs=49.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-----ccccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-----KEVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vv~~a~   80 (104)
                      ..++++|+|++|.+|..+++.+...|.+|+++++++++.+....... ....|+.+.+++.+.+     .++|++|+++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~-~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g  223 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF-DAAFNYKTVNSLEEALKKASPDGYDCYFDNVG  223 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-SEEEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC-cEEEecCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence            34689999999999999999999999999999887654422211111 1112444322222222     25899999998


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       224 ~  224 (333)
T 1v3u_A          224 G  224 (333)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=98.29  E-value=8.1e-06  Score=53.62  Aligned_cols=70  Identities=19%  Similarity=0.217  Sum_probs=51.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +.+++|+|+|+ |.+|+.+++.+.+.|+++.+++.++...  ..+.-......++.|.+.+.++.+.+|+|..
T Consensus        10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p--~~~~ad~~~~~~~~d~~~l~~~~~~~dvi~~   79 (377)
T 3orq_A           10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCP--CRYVAHEFIQAKYDDEKALNQLGQKCDVITY   79 (377)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCT--TGGGSSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCCh--hhhhCCEEEECCCCCHHHHHHHHHhCCccee
Confidence            34578999996 9999999999999999999998765432  1111111112378888999998888998744

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=98.28  E-value=6.9e-07  Score=60.11  Aligned_cols=74  Identities=16%  Similarity=0.161  Sum_probs=50.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccc--ccc----------ccccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIH--KEF----------QELDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~--~~~----------~d~~~~~~~~~~~~~~d~   74 (104)
                      ++|.|+|+ |++|..++..|.+.|++|+++++++++.+.... ....  +..          ..+.-..++.++++++|+
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aDv   81 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEADI   81 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCCE
Confidence            58999996 999999999999999999999998755422111 0000  000          011112244566788999


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      ||.+.+.+
T Consensus        82 ViiaVptp   89 (450)
T 3gg2_A           82 IFIAVGTP   89 (450)
T ss_dssp             EEECCCCC
T ss_pred             EEEEcCCC
Confidence            99999876

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=98.28  E-value=5.7e-07  Score=57.10  Aligned_cols=67  Identities=13%  Similarity=0.173  Sum_probs=44.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +++|.|+|+ |.+|..++..|...|++|++++|+++..+......    +....+   +.+++.++|+||.+.+.
T Consensus         4 ~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g----~~~~~~---~~~~~~~~D~vi~~vp~   70 (301)
T 3cky_A            4 SIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQG----AQACEN---NQKVAAASDIIFTSLPN   70 (301)
T ss_dssp             CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTTT----CEECSS---HHHHHHHCSEEEECCSS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCC----CeecCC---HHHHHhCCCEEEEECCC
Confidence            368999996 99999999999999999999888765432111100    111112   33445567777777754

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=98.28  E-value=3.5e-06  Score=66.16  Aligned_cols=76  Identities=14%  Similarity=0.159  Sum_probs=53.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCcccc----cc-----cccccccccccChHHHHHhh------c
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRT----SK-----LEIHKEFQELDEHEKIISIL------K   70 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~----~~-----~~~~~~~~d~~~~~~~~~~~------~   70 (104)
                      .++++||||+|.+|.++++.|+++|.. |.+++|+..+.+..    ..     ........|+.|.+++.+++      .
T Consensus      1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g 1963 (2512)
T 2vz8_A         1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLG 1963 (2512)
T ss_dssp             TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcC
Confidence            468999999999999999999999986 77778876543110    00     00111112888888777665      3


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||+||..
T Consensus      1964 ~id~lVnnAgv~ 1975 (2512)
T 2vz8_A         1964 PVGGVFNLAMVL 1975 (2512)
T ss_dssp             CEEEEEECCCC-
T ss_pred             CCcEEEECCCcC
Confidence            589999999964

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=98.28  E-value=3.5e-06  Score=56.14  Aligned_cols=70  Identities=16%  Similarity=0.152  Sum_probs=51.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +.+++|+|+|+ |.+|+.+++.+.+.|+++.+++.++...  ..+........++.|.+.+.++..++|+|+.
T Consensus        33 ~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p--~~~~ad~~~~~~~~d~~~l~~~a~~~D~V~~  102 (419)
T 4e4t_A           33 LPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASP--AGAVADRHLRAAYDDEAALAELAGLCEAVST  102 (419)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCH--HHHHSSEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCc--hhhhCCEEEECCcCCHHHHHHHHhcCCEEEE
Confidence            45679999996 9999999999999999998887654332  1111111112378888999888889999884

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=98.27  E-value=3.8e-07  Score=59.52  Aligned_cols=77  Identities=10%  Similarity=0.146  Sum_probs=49.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc----cccc--cc-cccChHHHHHhhccccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE----IHKE--FQ-ELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~----~~~~--~~-d~~~~~~~~~~~~~~d~vv~   77 (104)
                      |+|++|.|+|+ |.+|..++..|.+.|++|++++|+++..+......    ..+.  +. .+.-..++.+++.++|+||.
T Consensus        13 m~M~kI~iIG~-G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVil   91 (366)
T 1evy_A           13 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILF   91 (366)
T ss_dssp             CCEEEEEEECC-SHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEE
T ss_pred             hccCeEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEE
Confidence            33348999997 99999999999999999999998864432111100    0000  00 01111234456778999999


Q ss_pred             cccCc
Q 046878           78 TVAYP   82 (104)
Q Consensus        78 ~a~~~   82 (104)
                      +.+..
T Consensus        92 av~~~   96 (366)
T 1evy_A           92 VIPTQ   96 (366)
T ss_dssp             CCCHH
T ss_pred             CCChH
Confidence            98864

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.27  E-value=1.3e-06  Score=56.61  Aligned_cols=75  Identities=15%  Similarity=0.129  Sum_probs=50.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc-ccccc----ccccccccChHHHHHhhccccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT-SKLEI----HKEFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~-~~~~~----~~~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      ++||.|+|+ |.+|..++..|...|+ +|.+++++++..+.. .....    ......+.-..++.++++++|+||.++|
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a~g   87 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG   87 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEccC
Confidence            358999998 9999999999999887 899999887554220 00000    0000112111345557899999999996


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      .+
T Consensus        88 ~p   89 (331)
T 1pzg_A           88 LT   89 (331)
T ss_dssp             CS
T ss_pred             CC
Confidence            54

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=98.27  E-value=6.6e-07  Score=57.46  Aligned_cols=70  Identities=16%  Similarity=0.193  Sum_probs=45.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC--CCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV--TENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+++|.|+|. |.+|..++..|.+.|+ +|++++|++  ...+......       ....+++.++++++|+||.+.+..
T Consensus        23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g-------~~~~~~~~e~~~~aDvVi~~vp~~   94 (312)
T 3qsg_A           23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELG-------VSCKASVAEVAGECDVIFSLVTAQ   94 (312)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTT-------CEECSCHHHHHHHCSEEEECSCTT
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCC-------CEEeCCHHHHHhcCCEEEEecCch
Confidence            3578999996 9999999999999999 999999973  2221111000       111122344556777777777765


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        95 ~   95 (312)
T 3qsg_A           95 A   95 (312)
T ss_dssp             T
T ss_pred             h
Confidence            4

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=98.26  E-value=1.2e-06  Score=56.58  Aligned_cols=86  Identities=7%  Similarity=0.007  Sum_probs=60.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChhh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLLD   86 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~~   86 (104)
                      ++++|+|+ |.+|+.+++.|.+.|+ +++++++++..+ ...........|..+++.+.++ ++++|.++.+.+..  ..
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~d--~~  190 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLESD--SE  190 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCSSH--HH
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCCcc--HH
Confidence            47999997 9999999999999999 999988876553 2111111112388999999888 88999999988753  22


Q ss_pred             HHHHHHHHHHhC
Q 046878           87 QLKIVDAIKVAG   98 (104)
Q Consensus        87 ~~~l~~~~~~~~   98 (104)
                      .......+++.+
T Consensus       191 n~~~~~~ar~~~  202 (336)
T 1lnq_A          191 TIHCILGIRKID  202 (336)
T ss_dssp             HHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHC
Confidence            333444455443

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=98.26  E-value=1.8e-06  Score=55.52  Aligned_cols=75  Identities=17%  Similarity=0.181  Sum_probs=50.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEc--CCCCccccccccc-cc-cc--c--cccChHHHHHhhccccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYAR--PVTENSRTSKLEI-HK-EF--Q--ELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r--~~~~~~~~~~~~~-~~-~~--~--d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      ++|.|+|+ |.+|..++..|.+.|++|++++|  +++..+....... .. ..  .  ...+++++.+.+.++|+||.+.
T Consensus         1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v   79 (335)
T 1txg_A            1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (335)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence            37999997 99999999999999999999998  6543321111000 00 00  0  1222224556678899999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      +...
T Consensus        80 ~~~~   83 (335)
T 1txg_A           80 STDG   83 (335)
T ss_dssp             CGGG
T ss_pred             ChHH
Confidence            8764

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=98.25  E-value=4.2e-06  Score=54.67  Aligned_cols=85  Identities=20%  Similarity=0.197  Sum_probs=50.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEE--cCCCCcccccccccc---------c--ccccccChHHHHHhhcc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYA--RPVTENSRTSKLEIH---------K--EFQELDEHEKIISILKE   71 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~--r~~~~~~~~~~~~~~---------~--~~~d~~~~~~~~~~~~~   71 (104)
                      ++.+++|+||+|++|+.+++.|.++. .++..+.  ++.......+...+.         .  .+.++ +++.    +.+
T Consensus         3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~----~~~   77 (350)
T 2ep5_A            3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPIVST-NYED----HKD   77 (350)
T ss_dssp             CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBEECS-SGGG----GTT
T ss_pred             CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEEeeC-CHHH----hcC
Confidence            44689999999999999999988765 3676665  222111011000110         0  01122 2222    368


Q ss_pred             ccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           72 VGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        72 ~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      +|+||.|+|..   .+..++..+.+++
T Consensus        78 vDvVf~atp~~---~s~~~a~~~~~aG  101 (350)
T 2ep5_A           78 VDVVLSALPNE---LAESIELELVKNG  101 (350)
T ss_dssp             CSEEEECCCHH---HHHHHHHHHHHTT
T ss_pred             CCEEEECCChH---HHHHHHHHHHHCC
Confidence            99999988754   3456777777776

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.25  E-value=6.7e-07  Score=56.86  Aligned_cols=76  Identities=12%  Similarity=0.087  Sum_probs=51.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc-cccccc-cccc-cccChHHHHHhhccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT-SKLEIH-KEFQ-ELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~-~~~~~~-~~~~-d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      .+.++++|+|+ |.+|++++..|.+.|. +|++++|+.++.+.. ...... .... ...+.+++.+.+.++|+||++.+
T Consensus       125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp  203 (283)
T 3jyo_A          125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATP  203 (283)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSS
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCC
Confidence            45678999997 9999999999999997 699999987554211 111100 0000 11223456677889999999997


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       204 ~  204 (283)
T 3jyo_A          204 M  204 (283)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=98.24  E-value=5.5e-06  Score=54.16  Aligned_cols=69  Identities=16%  Similarity=0.176  Sum_probs=47.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..+++.|+|. |.+|+.+++.|...|.+|.+.+|++...+......       ..-.+++.++++++|+|+.+.+.
T Consensus       162 l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~~~~l~ell~~aDvV~l~~Pl  230 (351)
T 3jtm_A          162 LEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKETG-------AKFVEDLNEMLPKCDVIVINMPL  230 (351)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHHC-------CEECSCHHHHGGGCSEEEECSCC
T ss_pred             ccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhCC-------CeEcCCHHHHHhcCCEEEECCCC
Confidence            55689999996 99999999999999999999888753321111000       11112355667777877777764

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=98.24  E-value=2.1e-06  Score=68.13  Aligned_cols=77  Identities=5%  Similarity=0.057  Sum_probs=55.6

Q ss_pred             CCCCeEEEEccCCh-hhHHHHHHHHhCCCeEEEEEcCCCC-----cccc-ccc-----ccccccccccChHHHHHhh---
Q 046878            5 NTKPKILIFGGTGY-LGKYMVKASVSSGHNTFVYARPVTE-----NSRT-SKL-----EIHKEFQELDEHEKIISIL---   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~-iG~~l~~~l~~~~~~v~~~~r~~~~-----~~~~-~~~-----~~~~~~~d~~~~~~~~~~~---   69 (104)
                      ++.++++||||++. ||.++++.|++.|..|++.+|+...     .+.. ...     .......|+.+++++.+++   
T Consensus      2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D         2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp             CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            56688999999999 9999999999999999999988654     1100 000     0111113888877776653   


Q ss_pred             --------ccccEEEEcccC
Q 046878           70 --------KEVGVVISTVAY   81 (104)
Q Consensus        70 --------~~~d~vv~~a~~   81 (104)
                              ...|++||+||.
T Consensus      2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D         2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp             TSCCEEEESSSEEEECCCCC
T ss_pred             HhhhhhhcCCCCEEEECCCc
Confidence                    247999999997

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=98.24  E-value=1.3e-06  Score=59.08  Aligned_cols=77  Identities=16%  Similarity=0.182  Sum_probs=48.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |++++|.|+|+ |.+|+.++..|.+.|++|.+++|++++.+..........+.-..+.+++.+.++++|+||.+.+..
T Consensus         3 m~~~~IgvIG~-G~mG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~gi~~~~s~~e~v~~l~~aDvVilavp~~   79 (474)
T 2iz1_A            3 MAQANFGVVGM-AVMGKNLALNVESRGYTVAIYNRTTSKTEEVFKEHQDKNLVFTKTLEEFVGSLEKPRRIMLMVQAG   79 (474)
T ss_dssp             CTTBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSCEEECSSHHHHHHTBCSSCEEEECCCTT
T ss_pred             CCCCcEEEEee-HHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHhCcCCCeEEeCCHHHHHhhccCCCEEEEEccCc
Confidence            44468999996 999999999999999999999988654421111000001111233333333334578888887764

>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*

Probab=98.23  E-value=2.2e-05  Score=50.43  Aligned_cols=74  Identities=14%  Similarity=0.045  Sum_probs=46.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEE-cCCCCcccccccccccccccccChHHHHHh-------hccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTENSRTSKLEIHKEFQELDEHEKIISI-------LKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-------~~~~d~vv~~   78 (104)
                      |.++.|+|++|++|...++.+...+.+++++. ++++.. .  .........-+.+.+++.+.       -.++|+|+.+
T Consensus         3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~--~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~vD~V~I~   79 (312)
T 3o9z_A            3 MTRFALTGLAGYIAPRHLKAIKEVGGVLVASLDPATNVG-L--VDSFFPEAEFFTEPEAFEAYLEDLRDRGEGVDYLSIA   79 (312)
T ss_dssp             CCEEEEECTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-G--GGGTCTTCEEESCHHHHHHHHHHHHHTTCCCSEEEEC
T ss_pred             ceEEEEECCChHHHHHHHHHHHhCCCEEEEEEcCCHHHH-H--HHhhCCCCceeCCHHHHHHHhhhhcccCCCCcEEEEC
Confidence            46999999878999999999988777766554 444322 1  11111111234455555432       2578999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      .+...
T Consensus        80 tP~~~   84 (312)
T 3o9z_A           80 SPNHL   84 (312)
T ss_dssp             SCGGG
T ss_pred             CCchh
Confidence            98743

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=98.23  E-value=1.5e-06  Score=56.60  Aligned_cols=77  Identities=16%  Similarity=0.272  Sum_probs=49.6

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChH-HHHHhhccccEEEEcc
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE-KIISILKEVGVVISTV   79 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~d~vv~~a   79 (104)
                      |......++|.|+|. |.+|..++..|.+.|++|++++|+++..+.......    ....+.+ .+.++..++|+||.+.
T Consensus         2 m~~~~~~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~~~~~a~~~G~----~~~~~~~e~~~~a~~~aDlVilav   76 (341)
T 3ktd_A            2 MTTKDISRPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRSGAKSAVDEGF----DVSADLEATLQRAAAEDALIVLAV   76 (341)
T ss_dssp             ----CCSSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTC----CEESCHHHHHHHHHHTTCEEEECS
T ss_pred             CCccCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC----eeeCCHHHHHHhcccCCCEEEEeC
Confidence            444334568999995 999999999999999999999988754421111111    1122332 2333455689999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      +..
T Consensus        77 P~~   79 (341)
T 3ktd_A           77 PMT   79 (341)
T ss_dssp             CHH
T ss_pred             CHH
Confidence            864

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=98.23  E-value=2.3e-06  Score=55.95  Aligned_cols=87  Identities=14%  Similarity=0.124  Sum_probs=49.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCC-Cccccc-ccccc------ccccc--ccChHHHHHhhc-cccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVT-ENSRTS-KLEIH------KEFQE--LDEHEKIISILK-EVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~-~~~~~~-~~~~~------~~~~d--~~~~~~~~~~~~-~~d~v   75 (104)
                      ++|+|+||+|++|+.+++.|.+++ .++..+.+++. ..+... ...+.      ....+  +.+. +..++++ ++|+|
T Consensus         9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~DvV   87 (354)
T 1ys4_A            9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT-DPKHEEFEDVDIV   87 (354)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES-CTTSGGGTTCCEE
T ss_pred             ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC-CHHHHhcCCCCEE
Confidence            589999999999999999998765 46777764322 111110 00110      00011  1110 1122345 89999


Q ss_pred             EEcccCcChhhHHHHHHHHHHhC
Q 046878           76 ISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        76 v~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      |.|+|...   ...++..+.+++
T Consensus        88 ~~atp~~~---~~~~a~~~~~aG  107 (354)
T 1ys4_A           88 FSALPSDL---AKKFEPEFAKEG  107 (354)
T ss_dssp             EECCCHHH---HHHHHHHHHHTT
T ss_pred             EECCCchH---HHHHHHHHHHCC
Confidence            99988642   345566666665

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.23  E-value=5.1e-06  Score=53.53  Aligned_cols=77  Identities=8%  Similarity=0.118  Sum_probs=51.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccc-ccc-------cccccccChHHHHHhhccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKL-EIH-------KEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~-~~~-------~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      .+.++++|+|+ |..|++++..|.+.|. +|+++.|+++..+..... ..+       ....++.+.+.+.+.+.++|+|
T Consensus       146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI  224 (312)
T 3t4e_A          146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL  224 (312)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence            35679999997 9999999999999997 799999984432111110 000       0011344444446667889999


Q ss_pred             EEcccCc
Q 046878           76 ISTVAYP   82 (104)
Q Consensus        76 v~~a~~~   82 (104)
                      ||+.+..
T Consensus       225 INaTp~G  231 (312)
T 3t4e_A          225 TNGTKVG  231 (312)
T ss_dssp             EECSSTT
T ss_pred             EECCcCC
Confidence            9998753

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=98.22  E-value=3.2e-06  Score=52.93  Aligned_cols=68  Identities=13%  Similarity=0.239  Sum_probs=48.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +. +++|+|+ |.+|++++..|.+.|. +|++++|++++.+...  ....    ....+++.+.+.++|+||++.+.
T Consensus       108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la--~~~~----~~~~~~~~~~~~~aDiVInatp~  176 (253)
T 3u62_A          108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD--FPVK----IFSLDQLDEVVKKAKSLFNTTSV  176 (253)
T ss_dssp             CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC--SSCE----EEEGGGHHHHHHTCSEEEECSST
T ss_pred             CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH--HHcc----cCCHHHHHhhhcCCCEEEECCCC
Confidence            45 8999997 9999999999999997 8999999875432111  1111    01223456667889999998864

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=98.21  E-value=2.1e-06  Score=54.95  Aligned_cols=37  Identities=27%  Similarity=0.419  Sum_probs=32.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +++|.|+|+ |.+|..++..|...|++|.+++|+++..
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~   66 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKC   66 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGG
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHH
Confidence            368999996 9999999999999999999999887554

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=98.21  E-value=1.1e-05  Score=53.07  Aligned_cols=83  Identities=16%  Similarity=0.146  Sum_probs=47.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCe---EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHN---TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~---v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      .+|+|+||||++|+.+++.|.+++++   +..+..+....+..........+.+.. +    +.+.++|+||.|+|..  
T Consensus         3 ~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~~~~~~~~~~~-~----~~~~~~Dvvf~a~~~~--   75 (366)
T 3pwk_A            3 YTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETT-E----TAFEGVDIALFSAGSS--   75 (366)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEETTEEEEEEECC-T----TTTTTCSEEEECSCHH--
T ss_pred             cEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceecCCCceEeeCC-H----HHhcCCCEEEECCChH--
Confidence            58999999999999999988887653   344433222111111000000111222 1    2257899999999753  


Q ss_pred             hhHHHHHHHHHHhC
Q 046878           85 LDQLKIVDAIKVAG   98 (104)
Q Consensus        85 ~~~~~l~~~~~~~~   98 (104)
                       .....+..+.+++
T Consensus        76 -~s~~~a~~~~~~G   88 (366)
T 3pwk_A           76 -TSAKYAPYAVKAG   88 (366)
T ss_dssp             -HHHHHHHHHHHTT
T ss_pred             -hHHHHHHHHHHCC
Confidence             2355555555565

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=98.21  E-value=7.3e-06  Score=53.28  Aligned_cols=84  Identities=19%  Similarity=0.189  Sum_probs=49.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC---CeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++++|.||+|++|+.+++.|.+++   .+++.+..+...............+.+. ++    ..+.++|+||.|+|...
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~~~~i~~~~~-~~----~~~~~vDvVf~a~g~~~   77 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNV-EE----FDWSQVHIALFSAGGEL   77 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEETTEEEEEEEG-GG----CCGGGCSEEEECSCHHH
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeecCceeEEecC-Ch----HHhcCCCEEEECCCchH
Confidence            4689999999999999999999874   3566555322111000000000001121 11    13468999999998642


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                         ....+..+.+++
T Consensus        78 ---s~~~a~~~~~~G   89 (336)
T 2r00_A           78 ---SAKWAPIAAEAG   89 (336)
T ss_dssp             ---HHHHHHHHHHTT
T ss_pred             ---HHHHHHHHHHcC
Confidence               456666666665

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=98.21  E-value=4.5e-05  Score=50.16  Aligned_cols=70  Identities=21%  Similarity=0.217  Sum_probs=51.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +.+++|+|+|+ |.+|+.+++.+.+.|+++.+++.++...  ...........++.|.+.+.+.++.+|+|..
T Consensus        12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~--~~~~ad~~~~~~~~d~~~l~~~~~~~dvI~~   81 (389)
T 3q2o_A           12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSP--CAQVADIEIVASYDDLKAIQHLAEISDVVTY   81 (389)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCT--TTTTCSEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCc--hHHhCCceEecCcCCHHHHHHHHHhCCEeee
Confidence            34579999996 9999999999999999999998765332  1111111112378888888888888998744

>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}

Probab=98.21  E-value=6.1e-06  Score=53.10  Aligned_cols=63  Identities=19%  Similarity=0.190  Sum_probs=45.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+.+|++....       .    .+   .++.++++++|+|+.+.+..
T Consensus       142 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-------~----~~---~~l~ell~~aDvV~l~~p~~  204 (311)
T 2cuk_A          142 LQGLTLGLVGM-GRIGQAVAKRALAFGMRVVYHARTPKPLP-------Y----PF---LSLEELLKEADVVSLHTPLT  204 (311)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSS-------S----CB---CCHHHHHHHCSEEEECCCCC
T ss_pred             CCCCEEEEEEE-CHHHHHHHHHHHHCCCEEEEECCCCcccc-------c----cc---CCHHHHHhhCCEEEEeCCCC
Confidence            45679999996 99999999999999999999988765431       0    11   12344566677776666543

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=98.20  E-value=5.6e-06  Score=53.90  Aligned_cols=64  Identities=16%  Similarity=0.249  Sum_probs=45.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+.+|++.....            .....++.++++++|+|+.+.+.
T Consensus       169 l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------------~~~~~sl~ell~~aDvVil~vP~  232 (340)
T 4dgs_A          169 PKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLSGVD------------WIAHQSPVDLARDSDVLAVCVAA  232 (340)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCTTSC------------CEECSSHHHHHHTCSEEEECC--
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcccccC------------ceecCCHHHHHhcCCEEEEeCCC
Confidence            45689999996 999999999999999999999887643210            00112345566677777777664

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=98.20  E-value=2.2e-06  Score=54.25  Aligned_cols=65  Identities=17%  Similarity=0.146  Sum_probs=42.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++|.|+|+ |.+|+.++..|...|++|++++ +++..+......    ....   +++.+++.++|+||.+.+.
T Consensus         4 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~g----~~~~---~~~~~~~~~~D~vi~~vp~   68 (295)
T 1yb4_A            4 MKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IGPVADELLSLG----AVNV---ETARQVTEFADIIFIMVPD   68 (295)
T ss_dssp             CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTTT----CBCC---SSHHHHHHTCSEEEECCSS
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHcC----Cccc---CCHHHHHhcCCEEEEECCC
Confidence            58999996 9999999999999999998887 654432111110    1111   1233445567777776654

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=98.20  E-value=2e-06  Score=55.37  Aligned_cols=71  Identities=21%  Similarity=0.239  Sum_probs=48.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHH-hhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIIS-ILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~-~~~~~d~vv~~a~~~~   83 (104)
                      .++|.|+|+ |.+|..++..|.+.|+  +|++++|+++..+..........  -..   ++.+ ++.++|+||.+.+...
T Consensus        33 ~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~--~~~---~~~~~~~~~aDvVilavp~~~  106 (314)
T 3ggo_A           33 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDE--GTT---SIAKVEDFSPDFVMLSSPVRT  106 (314)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSE--EES---CTTGGGGGCCSEEEECSCGGG
T ss_pred             CCEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcch--hcC---CHHHHhhccCCEEEEeCCHHH
Confidence            368999995 9999999999999998  89999988754421111111000  011   1234 5678899998888754

>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}

Probab=98.20  E-value=2.1e-06  Score=49.43  Aligned_cols=35  Identities=14%  Similarity=0.168  Sum_probs=29.4

Q ss_pred             CCeEEEEccC---ChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            7 KPKILIFGGT---GYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~---G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +++|+|+|++   |.+|..+++.|.+.|++|+.++.+.
T Consensus        13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~   50 (145)
T 2duw_A           13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKV   50 (145)
T ss_dssp             CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcc
Confidence            5689999987   7899999999999999876665544

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=98.19  E-value=1.3e-06  Score=56.24  Aligned_cols=34  Identities=12%  Similarity=0.056  Sum_probs=31.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~   41 (104)
                      +++|.|+|+ |.+|..++..|.+.| ++|++++|++
T Consensus        24 ~m~IgvIG~-G~mG~~lA~~L~~~G~~~V~~~dr~~   58 (317)
T 4ezb_A           24 MTTIAFIGF-GEAAQSIAGGLGGRNAARLAAYDLRF   58 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred             CCeEEEECc-cHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            368999996 999999999999999 9999999986

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=98.19  E-value=1.8e-06  Score=55.59  Aligned_cols=70  Identities=14%  Similarity=0.132  Sum_probs=44.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC----CeEEEEEcCCC--CcccccccccccccccccChHHHHHhhccccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG----HNTFVYARPVT--ENSRTSKLEIHKEFQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~----~~v~~~~r~~~--~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      |++++|.|+|+ |.+|..++..|.+.|    ++|++++|+++  ..+......    +.-..+   ..+.+.++|+||.+
T Consensus        20 ~~~mkI~iIG~-G~mG~ala~~L~~~G~~~~~~V~v~~r~~~~~~~~~l~~~G----~~~~~~---~~e~~~~aDvVila   91 (322)
T 2izz_A           20 FQSMSVGFIGA-GQLAFALAKGFTAAGVLAAHKIMASSPDMDLATVSALRKMG----VKLTPH---NKETVQHSDVLFLA   91 (322)
T ss_dssp             --CCCEEEESC-SHHHHHHHHHHHHTTSSCGGGEEEECSCTTSHHHHHHHHHT----CEEESC---HHHHHHHCSEEEEC
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCCCcceEEEECCCccHHHHHHHHHcC----CEEeCC---hHHHhccCCEEEEE
Confidence            44568999996 999999999999998    78999988874  221111100    010111   23445667877777


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      ..+.
T Consensus        92 v~~~   95 (322)
T 2izz_A           92 VKPH   95 (322)
T ss_dssp             SCGG
T ss_pred             eCHH
Confidence            7643

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=98.19  E-value=1.5e-06  Score=54.17  Aligned_cols=69  Identities=14%  Similarity=0.184  Sum_probs=46.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++|.|+|+ |.+|..++..|.+.|++|.+++|+++..+.....  .. +....+   +.+++.++|+||.+.++.
T Consensus         3 ~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~--~g-~~~~~~---~~~~~~~~D~Vi~~v~~~   71 (259)
T 2ahr_A            3 AMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ--LA-LPYAMS---HQDLIDQVDLVILGIKPQ   71 (259)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH--HT-CCBCSS---HHHHHHTCSEEEECSCGG
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHH--cC-CEeeCC---HHHHHhcCCEEEEEeCcH
Confidence            358999995 9999999999999999999888876543211100  00 111222   344566899999998853

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=98.19  E-value=4.9e-06  Score=50.53  Aligned_cols=36  Identities=25%  Similarity=0.369  Sum_probs=31.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      .+++|.|+|+ |.+|..++..|.+.|++|++++|+++
T Consensus        18 ~~~~I~iiG~-G~mG~~la~~l~~~g~~V~~~~~~~~   53 (209)
T 2raf_A           18 QGMEITIFGK-GNMGQAIGHNFEIAGHEVTYYGSKDQ   53 (209)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence            4578999995 99999999999999999999988765

>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*

Probab=98.19  E-value=5.1e-06  Score=53.93  Aligned_cols=38  Identities=13%  Similarity=0.156  Sum_probs=33.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      +..+++.|+|. |.+|+.+++.|...|++|.+.+|++..
T Consensus       162 l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~dr~~~~  199 (333)
T 3ba1_A          162 FSGKRVGIIGL-GRIGLAVAERAEAFDCPISYFSRSKKP  199 (333)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHTTTCCEEEECSSCCT
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCchh
Confidence            45678999996 999999999999999999999887654

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=98.19  E-value=6.6e-06  Score=53.53  Aligned_cols=89  Identities=21%  Similarity=0.164  Sum_probs=49.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCC---CCccccc-ccccccccccc--cChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPV---TENSRTS-KLEIHKEFQEL--DEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~---~~~~~~~-~~~~~~~~~d~--~~~~~~~~~~~~~d~vv~~a   79 (104)
                      |++|+|+|++|++|+.+++.|.++. +++..+.++.   ...+... ...+.....++  .+..+..+.+.++|+||.|+
T Consensus         4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~~~~~~~~~~~Dvvf~a~   83 (337)
T 3dr3_A            4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLAT   83 (337)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEESSGGGTCTTCSEEEECS
T ss_pred             ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEeccCCHHHHhcCCCEEEECC
Confidence            3689999999999999999998854 4666664443   2111110 00111111011  11001122337899999998


Q ss_pred             cCcChhhHHHHHHHHHHhC
Q 046878           80 AYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        80 ~~~~~~~~~~l~~~~~~~~   98 (104)
                      |...   ...++..+.+++
T Consensus        84 p~~~---s~~~~~~~~~~g   99 (337)
T 3dr3_A           84 AHEV---SHDLAPQFLEAG   99 (337)
T ss_dssp             CHHH---HHHHHHHHHHTT
T ss_pred             ChHH---HHHHHHHHHHCC
Confidence            8542   345555555555

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.19  E-value=1.5e-06  Score=56.27  Aligned_cols=78  Identities=13%  Similarity=0.191  Sum_probs=50.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc-ccccccc----ccccccChHHHHHhhccccEEEE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT-SKLEIHK----EFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~-~~~~~~~----~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      .|+++||.|+|+ |.+|..++..|...++ ++.++++++++.+.. .......    ....+.-.... ++++++|+||.
T Consensus         4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIi   81 (324)
T 3gvi_A            4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIV   81 (324)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEE
T ss_pred             CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEE
Confidence            466789999998 9999999999999888 899999987654200 0000000    00011100112 57899999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|.+.
T Consensus        82 aag~p~   87 (324)
T 3gvi_A           82 TAGVPR   87 (324)
T ss_dssp             CCSCCC
T ss_pred             ccCcCC
Confidence            998764

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=98.19  E-value=8.4e-06  Score=52.64  Aligned_cols=77  Identities=12%  Similarity=0.093  Sum_probs=54.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccc-cccc-----cChHHHHHhhccccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKE-FQEL-----DEHEKIISILKEVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~~d~-----~~~~~~~~~~~~~d~vv~~   78 (104)
                      ...++++|+|++..+|+.+++.|+..|..|++++|+......  ....... ....     .+++++.+.+.++|+||.+
T Consensus       175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~--ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIsA  252 (320)
T 1edz_A          175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT--RGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG  252 (320)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE--SCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh--HHHHHhhhcccccccccccHhHHHHHhccCCEEEEC
Confidence            456899999985567999999999999999999887433211  1110100 0111     3347889999999999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      +|.+.
T Consensus       253 tg~p~  257 (320)
T 1edz_A          253 VPSEN  257 (320)
T ss_dssp             CCCTT
T ss_pred             CCCCc
Confidence            99764

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.18  E-value=9.4e-07  Score=57.14  Aligned_cols=75  Identities=9%  Similarity=0.116  Sum_probs=49.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccCh----HHHHHhh-ccccEEEEcc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEH----EKIISIL-KEVGVVISTV   79 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~-~~~d~vv~~a   79 (104)
                      ..++++|+|++|.+|..+++.+...|.+|+++++++.+.+... .... ....|+.+.    +.+.+.. .++|++|+++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~-~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~  233 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF-DDAFNYKEESDLTAALKRCFPNGIDIYFENV  233 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC-SEEEETTSCSCSHHHHHHHCTTCEEEEEESS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-ceEEecCCHHHHHHHHHHHhCCCCcEEEECC
Confidence            3468999999999999999999999999999998765442221 1111 111133332    2222222 3589999999


Q ss_pred             cC
Q 046878           80 AY   81 (104)
Q Consensus        80 ~~   81 (104)
                      |.
T Consensus       234 g~  235 (345)
T 2j3h_A          234 GG  235 (345)
T ss_dssp             CH
T ss_pred             CH
Confidence            85

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.18  E-value=3e-06  Score=53.97  Aligned_cols=72  Identities=21%  Similarity=0.205  Sum_probs=50.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|+ |.+|+.+++.|...|.+|++++|++.+.+...... .    ...+.+++.++++++|+|+.+++..
T Consensus       153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-~----~~~~~~~l~~~l~~aDvVi~~~p~~  224 (293)
T 3d4o_A          153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIAEMG-M----EPFHISKAAQELRDVDVCINTIPAL  224 (293)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-S----EEEEGGGHHHHTTTCSEEEECCSSC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHCC-C----eecChhhHHHHhcCCCEEEECCChH
Confidence            45689999996 99999999999999999999998864321111000 0    1112345667788899999888764

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=98.18  E-value=1.5e-06  Score=53.97  Aligned_cols=68  Identities=12%  Similarity=0.151  Sum_probs=45.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC----eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH----NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~----~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++|.|+|+ |.+|..+++.|.+.|+    +|++++|++++.+.....  .. ..-..+   ..+++.++|+||.+..+.
T Consensus         3 ~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~--~g-~~~~~~---~~e~~~~aDvVilav~~~   74 (247)
T 3gt0_A            3 KQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK--YG-LTTTTD---NNEVAKNADILILSIKPD   74 (247)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH--HC-CEECSC---HHHHHHHCSEEEECSCTT
T ss_pred             CeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH--hC-CEEeCC---hHHHHHhCCEEEEEeCHH
Confidence            58999996 9999999999999998    899999987544211100  00 011112   244556788888887543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.18  E-value=2.8e-06  Score=54.79  Aligned_cols=74  Identities=14%  Similarity=0.187  Sum_probs=46.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc-ccccccc----cccccccChHHHHHhhccccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR-TSKLEIH----KEFQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~-~~~~~~~----~~~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      +++||.|+|+ |++|..++..|...+.  ++.+++.++++.+. .......    ... .+.. +. .++++++|+||.+
T Consensus         6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~-~i~~-~~-~~a~~~aDvVii~   81 (318)
T 1y6j_A            6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQM-SLYA-GD-YSDVKDCDVIVVT   81 (318)
T ss_dssp             -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCE-EEC---C-GGGGTTCSEEEEC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCe-EEEE-CC-HHHhCCCCEEEEc
Confidence            3468999998 9999999999998886  89999988655421 0000000    000 1111 11 4568999999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      +|.+.
T Consensus        82 ~g~p~   86 (318)
T 1y6j_A           82 AGANR   86 (318)
T ss_dssp             CCC--
T ss_pred             CCCCC
Confidence            99765

>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*

Probab=98.17  E-value=1.3e-05  Score=52.19  Aligned_cols=65  Identities=14%  Similarity=0.178  Sum_probs=47.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.||+.+++.|...|.+|.+.+|++...  ..  . .   ..+.   ++.++++++|+|+.+.+.
T Consensus       146 l~gktvgIiGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~~--~~--~-~---~~~~---~l~ell~~aDvV~l~~Pl  210 (343)
T 2yq5_A          146 IYNLTVGLIGV-GHIGSAVAEIFSAMGAKVIAYDVAYNPE--FE--P-F---LTYT---DFDTVLKEADIVSLHTPL  210 (343)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCGG--GT--T-T---CEEC---CHHHHHHHCSEEEECCCC
T ss_pred             cCCCeEEEEec-CHHHHHHHHHHhhCCCEEEEECCChhhh--hh--c-c---cccc---CHHHHHhcCCEEEEcCCC
Confidence            34679999995 9999999999999999999999886431  00  0 0   0111   455667778887777774

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=98.17  E-value=1.7e-06  Score=54.76  Aligned_cols=36  Identities=19%  Similarity=0.217  Sum_probs=31.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ++|.|+|+ |.+|..++..|.+.|++|++++|+++..
T Consensus         1 m~i~iiG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~   36 (296)
T 2gf2_A            1 MPVGFIGL-GNMGNPMAKNLMKHGYPLIIYDVFPDAC   36 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred             CeEEEEec-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            37999996 9999999999999999999999886543

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=98.16  E-value=1.9e-06  Score=57.67  Aligned_cols=75  Identities=19%  Similarity=0.195  Sum_probs=49.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc-cc--cc----------cccccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE-IH--KE----------FQELDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~~--~~----------~~d~~~~~~~~~~~~~~d~   74 (104)
                      |+|.|+|+ |++|..++..|.+.|++|+++++++++.+...... ..  +.          ...+....++.++++++|+
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv   79 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence            47999995 99999999999999999999998865542111100 00  00          0011112234456778999


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      ||.+.+.+.
T Consensus        80 viiaVptp~   88 (436)
T 1mv8_A           80 SFICVGTPS   88 (436)
T ss_dssp             EEECCCCCB
T ss_pred             EEEEcCCCc
Confidence            999997654

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=98.16  E-value=4.2e-06  Score=53.43  Aligned_cols=72  Identities=17%  Similarity=0.224  Sum_probs=51.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|+ |.+|+.+++.|...|.+|++.+|++.+......   .. . ...+.+++.++++++|+|+.+++..
T Consensus       155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~---~g-~-~~~~~~~l~~~l~~aDvVi~~~p~~  226 (300)
T 2rir_A          155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITE---MG-L-VPFHTDELKEHVKDIDICINTIPSM  226 (300)
T ss_dssp             STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TT-C-EEEEGGGHHHHSTTCSEEEECCSSC
T ss_pred             CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---CC-C-eEEchhhHHHHhhCCCEEEECCChh
Confidence            45679999996 999999999999999999999988643311100   00 0 1112245667788899999988864

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=98.16  E-value=1.9e-06  Score=57.71  Aligned_cols=76  Identities=16%  Similarity=0.085  Sum_probs=49.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc-cc--ccc--------ccccChHHHHHhhcccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE-IH--KEF--------QELDEHEKIISILKEVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~~--~~~--------~d~~~~~~~~~~~~~~d   73 (104)
                      +.+++|.|+|+ |++|..++..|.+ |++|+++++++++.+....-. ..  +.+        ..+.-..++.++++++|
T Consensus        34 ~~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD  111 (432)
T 3pid_A           34 SEFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD  111 (432)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred             cCCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence            34579999996 9999999998887 999999999876542211100 00  000        01111223456678899


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      +||.+.+..
T Consensus       112 vViiaVPt~  120 (432)
T 3pid_A          112 YVIIATPTD  120 (432)
T ss_dssp             EEEECCCCE
T ss_pred             EEEEeCCCc
Confidence            999998875

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=98.16  E-value=1.4e-05  Score=50.87  Aligned_cols=89  Identities=8%  Similarity=0.079  Sum_probs=47.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhC-CCeEEEE-EcCCCCccccccccccc-ccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPVTENSRTSKLEIHK-EFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~-~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +.||+|.||+|.+|+.+++.+.+. +.++.++ +++++.....+..+... ....+.-.+++.+++.++|+||.++.+. 
T Consensus        21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aDVvIDFT~p~-   99 (288)
T 3ijp_A           21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTEGILDFSQPQ-   99 (288)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCSEEEECSCHH-
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCCEEEEcCCHH-
Confidence            458999999999999999998865 4566555 44432210000000000 0001111223445566788888776542 


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                        .....+..|.+++
T Consensus       100 --a~~~~~~~~l~~G  112 (288)
T 3ijp_A          100 --ASVLYANYAAQKS  112 (288)
T ss_dssp             --HHHHHHHHHHHHT
T ss_pred             --HHHHHHHHHHHcC
Confidence              2344444555554

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.16  E-value=3.1e-06  Score=55.04  Aligned_cols=74  Identities=16%  Similarity=0.185  Sum_probs=50.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccCh---HHHHHhhc--cccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEH---EKIISILK--EVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~--~~d~vv~~a~~   81 (104)
                      ..+++|+|++|.+|..+++.+...|.+|+++++++++.+...... .....|+.+.   +.+.+...  ++|++|+++|.
T Consensus       171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-a~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~  249 (351)
T 1yb5_A          171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNG-AHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLAN  249 (351)
T ss_dssp             TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT-CSEEEETTSTTHHHHHHHHHCTTCEEEEEESCHH
T ss_pred             cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcC-CCEEEeCCCchHHHHHHHHcCCCCcEEEEECCCh
Confidence            468999999999999999999999999999998865542211111 0111234332   23333333  68999999985

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=98.15  E-value=3.6e-06  Score=57.07  Aligned_cols=74  Identities=18%  Similarity=0.205  Sum_probs=48.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccc-cccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIH-KEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++|.|+|+ |.+|+.++..|.+.|++|.+++|++++.+........ ..+.-..+.+++.+.++++|+||.+.+..
T Consensus         3 m~IgvIG~-G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~~~~~~e~v~~l~~aDvVilaVp~~   77 (482)
T 2pgd_A            3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAG   77 (482)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTT
T ss_pred             CeEEEECh-HHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhccccCCCeEEeCCHHHHHhhccCCCEEEEeCCCh
Confidence            47999996 9999999999999999999999987554221110000 00111234444444445788888887764

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=98.15  E-value=1.6e-05  Score=52.62  Aligned_cols=69  Identities=19%  Similarity=0.277  Sum_probs=51.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccc--ccccccccChHHHHHhhccccEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEI--HKEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      |++++|+|+|+ |.+|+.+++.+.+.|+++.+++ ++...  ..+...  .....++.|.+.+.++.+.+|+|+.
T Consensus        22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p--~~~~ad~~~~~~~~~~d~~~l~~~a~~~d~i~~   92 (403)
T 3k5i_A           22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSP--AKQISAHDGHVTGSFKEREAVRQLAKTCDVVTA   92 (403)
T ss_dssp             CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCT--TGGGCCSSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCc--HHHhccccceeecCCCCHHHHHHHHHhCCEEEE
Confidence            45679999997 9999999999999999999998 54322  111111  1122478899999999999998764

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=98.15  E-value=3.1e-06  Score=52.72  Aligned_cols=76  Identities=13%  Similarity=0.216  Sum_probs=42.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEE-EEcCCCCcc------cccccccccccccccChHHHHHhh---ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFV-YARPVTENS------RTSKLEIHKEFQELDEHEKIISIL---KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~-~~r~~~~~~------~~~~~~~~~~~~d~~~~~~~~~~~---~~~d~   74 (104)
                      |+|+||+|+|+ |.+|+.+++.+.+.+.++.. +++++....      ..+.......+.|++.++...+.+   .+.++
T Consensus         1 M~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~~~DVvIDft~p~a~~~~~~l~~g~~v   79 (243)
T 3qy9_A            1 MASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVKGADVAIDFSNPNLLFPLLDEDFHLPL   79 (243)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCTTCSEEEECSCHHHHHHHHTSCCCCCE
T ss_pred             CCceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHhCCCEEEEeCChHHHHHHHHHhcCCce
Confidence            34579999999 99999999999987666554 445432110      001111011112566666544433   24567


Q ss_pred             EEEcccC
Q 046878           75 VISTVAY   81 (104)
Q Consensus        75 vv~~a~~   81 (104)
                      |+...|.
T Consensus        80 VigTTG~   86 (243)
T 3qy9_A           80 VVATTGE   86 (243)
T ss_dssp             EECCCSS
T ss_pred             EeCCCCC
Confidence            7766664

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.15  E-value=2.2e-06  Score=55.24  Aligned_cols=75  Identities=13%  Similarity=0.131  Sum_probs=50.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChH---HHHHhh-ccccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHE---KIISIL-KEVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~---~~~~~~-~~~d~vv~~a~   80 (104)
                      ..++++|+|++|.+|..+++.+...|.+|+++++++++.+.. ..... ....|+.+.+   .+.+.. .++|++|+++|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g  227 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF-DGAIDYKNEDLAAGLKRECPKGIDVFFDNVG  227 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC-SEEEETTTSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC-CEEEECCCHHHHHHHHHhcCCCceEEEECCC
Confidence            346899999999999999999999999999999887554222 11111 1112333322   222222 35899999998


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       228 ~  228 (336)
T 4b7c_A          228 G  228 (336)
T ss_dssp             H
T ss_pred             c
Confidence            5

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=98.15  E-value=6.2e-06  Score=53.42  Aligned_cols=69  Identities=12%  Similarity=0.231  Sum_probs=46.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+++++....+....   .. .. ..   ++.++++++|+|+.+.+..
T Consensus       153 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~---~g-~~-~~---~l~e~l~~aDvVi~~vp~~  221 (330)
T 2gcg_A          153 LTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE---FQ-AE-FV---STPELAAQSDFIVVACSLT  221 (330)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT---TT-CE-EC---CHHHHHHHCSEEEECCCCC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh---cC-ce-eC---CHHHHHhhCCEEEEeCCCC
Confidence            45679999996 999999999999999999999987653311110   00 00 11   2344566677777766653

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.15  E-value=7.1e-07  Score=56.69  Aligned_cols=73  Identities=15%  Similarity=0.214  Sum_probs=47.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccc---c-c-cccccChHHHHHhhccccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIH---K-E-FQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~---~-~-~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      ++.++++|+|+ |.+|++++..|.+.| +|++++|+.++.+... .....   . . ..|+.+   +.+.+.++|++|++
T Consensus       126 l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~  200 (287)
T 1nvt_A          126 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINA  200 (287)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEEC
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEEC
Confidence            45678999998 699999999999999 9999988764431110 00000   0 0 012222   13446788999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      +|..
T Consensus       201 ag~~  204 (287)
T 1nvt_A          201 TPIG  204 (287)
T ss_dssp             SCTT
T ss_pred             CCCC
Confidence            8864

>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}

Probab=98.15  E-value=3.9e-05  Score=49.35  Aligned_cols=74  Identities=12%  Similarity=0.066  Sum_probs=46.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEE-cCCCCcccccccccccccccccChHHHHHh--------hccccEEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTENSRTSKLEIHKEFQELDEHEKIISI--------LKEVGVVIS   77 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--------~~~~d~vv~   77 (104)
                      |.++.|+|++|++|...++.+...+.++.++. ++++.. .  .........-+.+.+++.+.        -.++|+|+.
T Consensus         3 mirvgiIG~gG~i~~~h~~~l~~~~~~lvav~d~~~~~~-~--~~~~~~~~~~~~~~~~ll~~~~~l~~~~~~~vD~V~I   79 (318)
T 3oa2_A            3 MKNFALIGAAGYIAPRHMRAIKDTGNCLVSAYDINDSVG-I--IDSISPQSEFFTEFEFFLDHASNLKRDSATALDYVSI   79 (318)
T ss_dssp             CCEEEEETTTSSSHHHHHHHHHHTTCEEEEEECSSCCCG-G--GGGTCTTCEEESSHHHHHHHHHHHTTSTTTSCCEEEE
T ss_pred             ceEEEEECCCcHHHHHHHHHHHhCCCEEEEEEcCCHHHH-H--HHhhCCCCcEECCHHHHHHhhhhhhhccCCCCcEEEE
Confidence            46999999878999999999988777766554 443321 1  11111111234455555431        257899999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      +.+...
T Consensus        80 ~tP~~~   85 (318)
T 3oa2_A           80 CSPNYL   85 (318)
T ss_dssp             CSCGGG
T ss_pred             CCCcHH
Confidence            988743

>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*

Probab=98.14  E-value=2.7e-05  Score=53.53  Aligned_cols=84  Identities=11%  Similarity=0.048  Sum_probs=62.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcChhh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQLLD   86 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~~~~   86 (104)
                      ++++|+|+ |.+|+.+++.|.+.|+++.+++.+++..+...    .....|.++++.+.++ +.++|.++.+.+..  ..
T Consensus       349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~~~~~d--~~  421 (565)
T 4gx0_A          349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIVTTNDD--ST  421 (565)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEECCSCH--HH
T ss_pred             CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEEECCCc--hH
Confidence            67999997 99999999999999999999999987763321    1122388898988887 78999999998864  22


Q ss_pred             HHHHHHHHHHhC
Q 046878           87 QLKIVDAIKVAG   98 (104)
Q Consensus        87 ~~~l~~~~~~~~   98 (104)
                      ...+...+++.+
T Consensus       422 ni~~~~~ak~l~  433 (565)
T 4gx0_A          422 NIFLTLACRHLH  433 (565)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHC
Confidence            233334455554

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=98.14  E-value=1.6e-06  Score=55.00  Aligned_cols=66  Identities=20%  Similarity=0.213  Sum_probs=44.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++|.|+|+ |.+|..++..|...|++|.+++|+++..+......    .....+   +.+++.++|+||.+.+.
T Consensus         6 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g----~~~~~~---~~~~~~~~D~vi~~v~~   71 (299)
T 1vpd_A            6 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG----AETAST---AKAIAEQCDVIITMLPN   71 (299)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----CEECSS---HHHHHHHCSEEEECCSS
T ss_pred             ceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC----CeecCC---HHHHHhCCCEEEEECCC
Confidence            58999995 99999999999999999999888765432111100    111122   23445567777777764

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=98.14  E-value=6.4e-06  Score=51.80  Aligned_cols=71  Identities=21%  Similarity=0.295  Sum_probs=48.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccc-c-c--cccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKE-F-Q--ELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~-~-~--d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      |+|.|+|+ |.+|..++..|.+.|++|++++|++...+.......... + .  ...+    .+.+.++|+||.+.+...
T Consensus         1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~d~vi~~v~~~~   75 (291)
T 1ks9_A            1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAND----PDFLATSDLLLVTLKAWQ   75 (291)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESC----HHHHHTCSEEEECSCGGG
T ss_pred             CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecC----ccccCCCCEEEEEecHHh
Confidence            47999997 999999999999999999999998765422111100000 0 0  1112    234578999999999865

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=98.14  E-value=4.7e-06  Score=56.50  Aligned_cols=75  Identities=17%  Similarity=0.181  Sum_probs=49.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc--c-cccc----------ccccChHHHHHhhcccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE--I-HKEF----------QELDEHEKIISILKEVG   73 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~--~-~~~~----------~d~~~~~~~~~~~~~~d   73 (104)
                      .++|.|+|+ |++|..++..|.+.|++|+++++++++.+......  . .+..          ..+.-..++.+++.++|
T Consensus         8 ~~~I~VIG~-G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD   86 (478)
T 2y0c_A            8 SMNLTIIGS-GSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD   86 (478)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred             CceEEEECc-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence            368999996 99999999999999999999999865542211100  0 0000          00111112345567899


Q ss_pred             EEEEcccCc
Q 046878           74 VVISTVAYP   82 (104)
Q Consensus        74 ~vv~~a~~~   82 (104)
                      +||.+.+.+
T Consensus        87 vviiaVptp   95 (478)
T 2y0c_A           87 VQFIAVGTP   95 (478)
T ss_dssp             EEEECCCCC
T ss_pred             EEEEEeCCC
Confidence            999998874

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=98.13  E-value=1.5e-05  Score=52.07  Aligned_cols=67  Identities=16%  Similarity=0.202  Sum_probs=45.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.||+.+++.|...|.+|.+.+|++........   ..    +  .+++.++++++|+|+.+.+.
T Consensus       171 l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~g---~~----~--~~~l~ell~~sDvV~l~~Pl  237 (345)
T 4g2n_A          171 LTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSHALEEG---AI----Y--HDTLDSLLGASDIFLIAAPG  237 (345)
T ss_dssp             CTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHTT---CE----E--CSSHHHHHHTCSEEEECSCC
T ss_pred             cCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcchhhhcC---Ce----E--eCCHHHHHhhCCEEEEecCC
Confidence            45679999995 999999999999999999999887643211110   00    1  12345556677777666664

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=98.12  E-value=1.8e-06  Score=54.53  Aligned_cols=71  Identities=18%  Similarity=0.342  Sum_probs=47.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ..++++|+|+ |.+|++++..|.+.|.+|++++|++++.+....  ... . +..+  ++.+.+.++|+||++.+...
T Consensus       128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~--~~g-~-~~~~--~~~~~~~~aDiVi~atp~~~  198 (275)
T 2hk9_A          128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQ--KFP-L-EVVN--SPEEVIDKVQVIVNTTSVGL  198 (275)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTT--TSC-E-EECS--CGGGTGGGCSEEEECSSTTS
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHH--HcC-C-eeeh--hHHhhhcCCCEEEEeCCCCC
Confidence            4578999996 999999999999999999999888644311110  000 0 1111  23445678898888887653

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.12  E-value=3.3e-06  Score=54.44  Aligned_cols=75  Identities=20%  Similarity=0.215  Sum_probs=50.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccCh---HHHHHhh--ccccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEH---EKIISIL--KEVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~--~~~d~vv~~a~   80 (104)
                      ...+++|+|++|.+|..+++.+...|.+|+++++++++.+...... .....|+.+.   +.+.+..  .++|++|+++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g-~~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g  223 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG-CHHTINYSTQDFAEVVREITGGKGVDVVYDSIG  223 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT-CSEEEETTTSCHHHHHHHHHTTCCEEEEEECSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC-CCEEEECCCHHHHHHHHHHhCCCCCeEEEECCc
Confidence            3468999999999999999999999999999998865442221111 0111133332   2333333  25899999999


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       224 ~  224 (333)
T 1wly_A          224 K  224 (333)
T ss_dssp             T
T ss_pred             H
Confidence            7

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=98.12  E-value=1.4e-05  Score=52.48  Aligned_cols=70  Identities=14%  Similarity=0.226  Sum_probs=47.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|.+ |.+.+|++...+...... .   ...   +++.++++++|+|+.+.+..
T Consensus       162 l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~~~g-~---~~~---~~l~ell~~aDvV~l~~P~t  232 (364)
T 2j6i_A          162 IEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEEKVG-A---RRV---ENIEELVAQADIVTVNAPLH  232 (364)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHHHTT-E---EEC---SSHHHHHHTCSEEEECCCCS
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHHhcC-c---Eec---CCHHHHHhcCCEEEECCCCC
Confidence            56689999996 99999999999999997 999888764331111000 0   011   23455666777777777654

>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}

Probab=98.12  E-value=2.3e-05  Score=50.83  Aligned_cols=65  Identities=9%  Similarity=0.095  Sum_probs=45.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+++|++...  ..  ..    ..+.   ++.++++++|+|+.+.+.
T Consensus       144 l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~~--~~----~~~~---~l~ell~~aDvV~~~~p~  208 (331)
T 1xdw_A          144 VRNCTVGVVGL-GRIGRVAAQIFHGMGATVIGEDVFEIKG--IE--DY----CTQV---SLDEVLEKSDIITIHAPY  208 (331)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCS--CT--TT----CEEC---CHHHHHHHCSEEEECCCC
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCccHH--HH--hc----cccC---CHHHHHhhCCEEEEecCC
Confidence            45579999996 9999999999999999999998876433  11  00    0111   345556677777776654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.11  E-value=2.7e-06  Score=55.32  Aligned_cols=73  Identities=12%  Similarity=0.083  Sum_probs=48.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc-cccccccccccCh---HHHHHhhc-cccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK-LEIHKEFQELDEH---EKIISILK-EVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~-~~~~~~~~d~~~~---~~~~~~~~-~~d~vv~~a~~   81 (104)
                      .+++|+|++|.+|..+++.+...|. +|+++++++++.+.... ... ....|+.+.   +.+.+... ++|++|+++|.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~-~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~G~  240 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF-DAAINYKKDNVAEQLRESCPAGVDVYFDNVGG  240 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC-SEEEETTTSCHHHHHHHHCTTCEEEEEESCCH
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC-ceEEecCchHHHHHHHHhcCCCCCEEEECCCH
Confidence            6899999999999999999999998 99999887644322111 111 111234332   22333222 58999999994

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=98.11  E-value=1.7e-05  Score=49.49  Aligned_cols=89  Identities=18%  Similarity=0.168  Sum_probs=57.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc-------------cc-------ccc------ccccccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT-------------SK-------LEI------HKEFQEL   59 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~-------------~~-------~~~------~~~~~d~   59 (104)
                      ..+|+|+|+ |.+|.++++.|...|. ++++++++.-.....             .+       ...      .......
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~  109 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL  109 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc
Confidence            468999997 9999999999999996 888888875211000             00       000      0000111


Q ss_pred             cChHHHHHhhccccEEEEcccCcChhhHHHHHHHHHHhC
Q 046878           60 DEHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        60 ~~~~~~~~~~~~~d~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      .+.+.+.+.++++|+||.+...  ......+.+.+.+.+
T Consensus       110 ~~~~~~~~~~~~~DvVi~~~d~--~~~~~~l~~~~~~~~  146 (249)
T 1jw9_B          110 LDDAELAALIAEHDLVLDCTDN--VAVRNQLNAGCFAAK  146 (249)
T ss_dssp             CCHHHHHHHHHTSSEEEECCSS--HHHHHHHHHHHHHHT
T ss_pred             CCHhHHHHHHhCCCEEEEeCCC--HHHHHHHHHHHHHcC
Confidence            2345667778899999999864  334455666676665

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=98.11  E-value=6.3e-06  Score=52.06  Aligned_cols=37  Identities=22%  Similarity=0.175  Sum_probs=33.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .++++|+|+ |..|++++..|.+.|.+|++++|+.++.
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka  154 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGL  154 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            468999997 9999999999999998999999998665

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=98.11  E-value=4.8e-06  Score=56.45  Aligned_cols=37  Identities=19%  Similarity=0.245  Sum_probs=33.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-CC-eEEEEEcCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-GH-NTFVYARPVT   42 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~-~v~~~~r~~~   42 (104)
                      +++++|.|+|+ |++|..++..|... |+ +|++++++++
T Consensus        16 ~~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~   54 (478)
T 3g79_A           16 GPIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK   54 (478)
T ss_dssp             CSCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred             CCCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence            34579999996 99999999999999 99 9999999987

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.10  E-value=9.3e-06  Score=52.49  Aligned_cols=78  Identities=15%  Similarity=0.180  Sum_probs=50.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc-cccccccc----cccccChHHHHHhhccccEEEE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT-SKLEIHKE----FQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~-~~~~~~~~----~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      .|+++||.|+|+ |.+|..++..|...+. ++.+++++++..+.. ........    ...+...+. .++++++|+||.
T Consensus         2 ~m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~d-~~a~~~aDvVIi   79 (321)
T 3p7m_A            2 AMARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTND-YKDLENSDVVIV   79 (321)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcCC-HHHHCCCCEEEE
Confidence            366689999996 9999999999998887 899999887553210 00010000    001110011 357889999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|.+.
T Consensus        80 ~ag~p~   85 (321)
T 3p7m_A           80 TAGVPR   85 (321)
T ss_dssp             CCSCCC
T ss_pred             cCCcCC
Confidence            998764

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=98.10  E-value=8.6e-06  Score=51.80  Aligned_cols=73  Identities=18%  Similarity=0.161  Sum_probs=50.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ..+++|+|++|.+|...++.+...|.+|+++++++++.+...... .....|+.+.+++.+.+.++|+||. +|.
T Consensus       126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-a~~~~~~~~~~~~~~~~~~~d~vid-~g~  198 (302)
T 1iz0_A          126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALG-AEEAATYAEVPERAKAWGGLDLVLE-VRG  198 (302)
T ss_dssp             TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTT-CSEEEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC-CCEEEECCcchhHHHHhcCceEEEE-CCH
Confidence            468999999999999999999889999999998876553222111 1111244331344445578999999 876

>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}

Probab=98.10  E-value=4.5e-06  Score=55.27  Aligned_cols=78  Identities=14%  Similarity=0.226  Sum_probs=52.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC--------eEEEEEcCCCCccc---------ccccccccccc---cccChHHH
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH--------NTFVYARPVTENSR---------TSKLEIHKEFQ---ELDEHEKI   65 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~--------~v~~~~r~~~~~~~---------~~~~~~~~~~~---d~~~~~~~   65 (104)
                      ++.||.|+|+ |.+|++++..|.++|+        +|.++.|+++....         ..+...++.+.   ++.-..++
T Consensus        33 ~p~KI~ViGa-GsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl  111 (391)
T 4fgw_A           33 KPFKVTVIGS-GNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDL  111 (391)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCH
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCH
Confidence            3458999997 9999999999998764        48999887653210         01111122111   22223467


Q ss_pred             HHhhccccEEEEcccCcCh
Q 046878           66 ISILKEVGVVISTVAYPQL   84 (104)
Q Consensus        66 ~~~~~~~d~vv~~a~~~~~   84 (104)
                      .++++++|+||.+.+...+
T Consensus       112 ~~al~~ad~ii~avPs~~~  130 (391)
T 4fgw_A          112 IDSVKDVDIIVFNIPHQFL  130 (391)
T ss_dssp             HHHHTTCSEEEECSCGGGH
T ss_pred             HHHHhcCCEEEEECChhhh
Confidence            8889999999999887653

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=98.10  E-value=1.9e-05  Score=49.23  Aligned_cols=88  Identities=11%  Similarity=0.141  Sum_probs=52.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-----ccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-----KEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vv~~a~~   81 (104)
                      ++|+|+|++|.+|+.+++.+.+. ++++..+..+....+.... .....+.|++.++...+.+     .+.++|+-+.|.
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~   79 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-GNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF   79 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-TTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-cCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence            37999999999999999998865 7888766554332211100 0111223677666554433     367888887775


Q ss_pred             cChhhHHHHHHHHHHh
Q 046878           82 PQLLDQLKIVDAIKVA   97 (104)
Q Consensus        82 ~~~~~~~~l~~~~~~~   97 (104)
                      .. +....+.+++++.
T Consensus        80 ~~-e~~~~l~~aa~~~   94 (245)
T 1p9l_A           80 TA-ERFQQVESWLVAK   94 (245)
T ss_dssp             CH-HHHHHHHHHHHTS
T ss_pred             CH-HHHHHHHHHHHhC
Confidence            43 2223444455433

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=98.09  E-value=1.5e-06  Score=55.45  Aligned_cols=38  Identities=16%  Similarity=0.387  Sum_probs=33.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+++|.|+|+ |.+|..++..|...|++|++++++++..
T Consensus        14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~   51 (302)
T 1f0y_A           14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDIL   51 (302)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            3468999997 9999999999999999999999986544

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.09  E-value=3.2e-06  Score=54.30  Aligned_cols=75  Identities=15%  Similarity=0.161  Sum_probs=49.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChH---HHHHhhc--cccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE---KIISILK--EVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~~--~~d~vv~~a~   80 (104)
                      ..++++|+||+|.+|..+++.+...|.+|+++++++++.+...... .....|+.+.+   .+.+...  ++|++|+++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g  218 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAG-AWQVINYREEDLVERLKEITGGKKVRVVYDSVG  218 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT-CSEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC-CCEEEECCCccHHHHHHHHhCCCCceEEEECCc
Confidence            3468999999999999999999999999999988765442221111 01112333322   3333332  5899999999


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       219 ~  219 (327)
T 1qor_A          219 R  219 (327)
T ss_dssp             G
T ss_pred             h
Confidence            3

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=98.09  E-value=3.3e-06  Score=57.24  Aligned_cols=77  Identities=14%  Similarity=0.147  Sum_probs=49.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCcccccccc-cc--ccc---------ccccChHHHHHhhc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTENSRTSKLE-IH--KEF---------QELDEHEKIISILK   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~~~~~~~~-~~--~~~---------~d~~~~~~~~~~~~   70 (104)
                      +++++|.|+|+ |++|..++..|.+.  |++|+++++++++.+...... ..  ..+         ..+.-..++.+++.
T Consensus         7 ~~~mkI~VIG~-G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~~   85 (481)
T 2o3j_A            7 GKVSKVVCVGA-GYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAIA   85 (481)
T ss_dssp             CCCCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHhh
Confidence            34569999996 99999999999988  689999998865542211100 00  000         00111112345567


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      ++|+||.+.+.+
T Consensus        86 ~aDvvii~Vptp   97 (481)
T 2o3j_A           86 EADLIFISVNTP   97 (481)
T ss_dssp             HCSEEEECCCCC
T ss_pred             cCCEEEEecCCc
Confidence            899999998764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.09  E-value=4.6e-06  Score=54.27  Aligned_cols=75  Identities=16%  Similarity=0.186  Sum_probs=50.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccCh---HHHHHhhc--cccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEH---EKIISILK--EVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~--~~d~vv~~a~~   81 (104)
                      ..+++|+||+|.+|..+++.+...|.+|+++++++++.+...... .....|+.+.   +.+.+...  ++|++|+++|.
T Consensus       163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLG-AAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGG  241 (354)
T ss_dssp             TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-CSEEEETTTSCHHHHHHHHTTTSCEEEEEESSCG
T ss_pred             CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC-CcEEEecCChHHHHHHHHHhcCCCceEEEECCCc
Confidence            468999999999999999999999999999998765542221111 0111133332   23333332  58999999997


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus       242 ~  242 (354)
T 2j8z_A          242 S  242 (354)
T ss_dssp             G
T ss_pred             h
Confidence            4

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=98.09  E-value=2.9e-06  Score=57.24  Aligned_cols=75  Identities=19%  Similarity=0.137  Sum_probs=48.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCcccccccc-cc--ccc---------ccccChHHHHHhhccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTENSRTSKLE-IH--KEF---------QELDEHEKIISILKEV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~~~~~~~~-~~--~~~---------~d~~~~~~~~~~~~~~   72 (104)
                      +++|.|+|+ |++|..++..|.+.  |++|++++|++++.+....-. ..  +..         ..+.-..++.++++++
T Consensus         5 ~mkI~VIG~-G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~a   83 (467)
T 2q3e_A            5 IKKICCIGA-GYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSPTLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKEA   83 (467)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHHC
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhcC
Confidence            468999996 99999999999998  799999999865442211000 00  000         0011112334567789


Q ss_pred             cEEEEcccCc
Q 046878           73 GVVISTVAYP   82 (104)
Q Consensus        73 d~vv~~a~~~   82 (104)
                      |+||.+.+.+
T Consensus        84 DvViiaVptp   93 (467)
T 2q3e_A           84 DLVFISVNTP   93 (467)
T ss_dssp             SEEEECCCCC
T ss_pred             CEEEEEcCCc
Confidence            9999998754

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=98.08  E-value=1.2e-05  Score=52.14  Aligned_cols=68  Identities=9%  Similarity=0.088  Sum_probs=45.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+.+|++.......... .    ...   ++.++++.+|+|+.+.+.
T Consensus       143 l~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~g-~----~~~---~l~ell~~aDvV~l~~P~  210 (330)
T 4e5n_A          143 LDNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQRLG-L----RQV---ACSELFASSDFILLALPL  210 (330)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHHHHT-E----EEC---CHHHHHHHCSEEEECCCC
T ss_pred             cCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHHhcC-c----eeC---CHHHHHhhCCEEEEcCCC
Confidence            45689999995 99999999999999999999988763321110000 0    111   345556667777666653

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=98.07  E-value=7.5e-06  Score=55.09  Aligned_cols=74  Identities=16%  Similarity=0.201  Sum_probs=51.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc-c--cccc----------ccccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE-I--HKEF----------QELDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~--~~~~----------~d~~~~~~~~~~~~~~d~   74 (104)
                      .+|.++|. |++|..++..|.+.|++|+++++++++.+....-. .  .+.+          ..+.-..++.++++++|+
T Consensus         9 ~~~~vIGl-G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv   87 (446)
T 4a7p_A            9 VRIAMIGT-GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA   87 (446)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence            58999996 99999999999999999999999987753222110 0  0000          011112345567788999


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      ||.+.+.+
T Consensus        88 vii~Vptp   95 (446)
T 4a7p_A           88 VFIAVGTP   95 (446)
T ss_dssp             EEECCCCC
T ss_pred             EEEEcCCC
Confidence            99997765

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=98.07  E-value=1.4e-05  Score=45.93  Aligned_cols=32  Identities=16%  Similarity=0.223  Sum_probs=27.2

Q ss_pred             CCeEEEEccC---ChhhHHHHHHHHhCCCeEEEEE
Q 046878            7 KPKILIFGGT---GYLGKYMVKASVSSGHNTFVYA   38 (104)
Q Consensus         7 ~~~i~i~Ga~---G~iG~~l~~~l~~~~~~v~~~~   38 (104)
                      +++|+|+|++   |.+|..+++.|.+.|++|+.++
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vn   56 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN   56 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEEC
Confidence            5789999997   7899999999999999855543

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=98.07  E-value=3.2e-06  Score=54.85  Aligned_cols=78  Identities=10%  Similarity=0.117  Sum_probs=49.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCC-------CeEEEEEcCCC-----Cccccccc----ccccc--cc-cccChHHH
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSG-------HNTFVYARPVT-----ENSRTSKL----EIHKE--FQ-ELDEHEKI   65 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~-------~~v~~~~r~~~-----~~~~~~~~----~~~~~--~~-d~~~~~~~   65 (104)
                      |.+++|.|+|+ |.+|..++..|.+.|       ++|++++|++.     ..+.....    ...+.  +. .+.-..++
T Consensus         6 m~~mkI~iIG~-G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   84 (354)
T 1x0v_A            6 MASKKVCIVGS-GNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAVPDV   84 (354)
T ss_dssp             -CCEEEEEECC-SHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEESSH
T ss_pred             cCCCeEEEECC-CHHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEEcCH
Confidence            44468999996 999999999999988       89999999875     22111000    00000  00 01111234


Q ss_pred             HHhhccccEEEEcccCcC
Q 046878           66 ISILKEVGVVISTVAYPQ   83 (104)
Q Consensus        66 ~~~~~~~d~vv~~a~~~~   83 (104)
                      .+++.++|+||.+.+...
T Consensus        85 ~~~~~~aD~Vilav~~~~  102 (354)
T 1x0v_A           85 VQAAEDADILIFVVPHQF  102 (354)
T ss_dssp             HHHHTTCSEEEECCCGGG
T ss_pred             HHHHcCCCEEEEeCCHHH
Confidence            456778999999988643

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=98.07  E-value=7.8e-06  Score=55.69  Aligned_cols=36  Identities=14%  Similarity=0.325  Sum_probs=32.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+|.|+|+ |.+|..++..|.++|++|.+.+|++++.
T Consensus        11 ~~IgvIGl-G~MG~~lA~~La~~G~~V~v~dr~~~~~   46 (497)
T 2p4q_A           11 ADFGLIGL-AVMGQNLILNAADHGFTVCAYNRTQSKV   46 (497)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSHHH
T ss_pred             CCEEEEee-HHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            58999996 9999999999999999999999987654

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=98.06  E-value=2.8e-06  Score=53.73  Aligned_cols=39  Identities=18%  Similarity=0.186  Sum_probs=32.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~~~   44 (104)
                      |++++|.|+|+ |.+|..++..|...  +++|.+++|+++..
T Consensus         4 M~~~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~   44 (290)
T 3b1f_A            4 MEEKTIYIAGL-GLIGASLALGIKRDHPHYKIVGYNRSDRSR   44 (290)
T ss_dssp             GCCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSSHHHH
T ss_pred             cccceEEEEee-CHHHHHHHHHHHhCCCCcEEEEEcCCHHHH
Confidence            55679999995 99999999999987  57888888876443

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=98.06  E-value=2.5e-06  Score=53.75  Aligned_cols=35  Identities=23%  Similarity=0.317  Sum_probs=30.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ++|.|+|+ |.+|..++..|.. |++|.+++|++++.
T Consensus         2 ~~i~iiG~-G~~G~~~a~~l~~-g~~V~~~~~~~~~~   36 (289)
T 2cvz_A            2 EKVAFIGL-GAMGYPMAGHLAR-RFPTLVWNRTFEKA   36 (289)
T ss_dssp             CCEEEECC-STTHHHHHHHHHT-TSCEEEECSSTHHH
T ss_pred             CeEEEEcc-cHHHHHHHHHHhC-CCeEEEEeCCHHHH
Confidence            57999996 9999999999999 99999998886543

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.06  E-value=5.1e-06  Score=55.16  Aligned_cols=73  Identities=25%  Similarity=0.365  Sum_probs=51.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcc-cccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENS-RTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~-~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ...++++|+|+ |.+|+.+++.|...|. +|++++|++.+.. ......  .   +..+.+++.+.+.++|+||.++|.+
T Consensus       165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g--~---~~~~~~~l~~~l~~aDvVi~at~~~  238 (404)
T 1gpj_A          165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG--G---EAVRFDELVDHLARSDVVVSATAAP  238 (404)
T ss_dssp             CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT--C---EECCGGGHHHHHHTCSEEEECCSSS
T ss_pred             ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC--C---ceecHHhHHHHhcCCCEEEEccCCC
Confidence            45679999997 9999999999999997 8999998864431 111111  0   1112234566678999999999866


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus       239 ~  239 (404)
T 1gpj_A          239 H  239 (404)
T ss_dssp             S
T ss_pred             C
Confidence            5

>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1

Probab=98.06  E-value=1.7e-05  Score=50.81  Aligned_cols=37  Identities=19%  Similarity=0.241  Sum_probs=32.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +..+++.|+|. |.+|+.+++.|...|++|.+.+|++.
T Consensus       122 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~dr~~~  158 (303)
T 1qp8_A          122 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK  158 (303)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcc
Confidence            45679999996 99999999999999999999988764

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.05  E-value=1.2e-06  Score=55.24  Aligned_cols=75  Identities=13%  Similarity=0.193  Sum_probs=47.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      .+.++++|+|+ |.+|++++..|.+.|.+|++++|+.++.+... ........ +..+.+++.+  .++|+||++++...
T Consensus       117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~-~~~~~~~~~~--~~~DivIn~t~~~~  192 (272)
T 1p77_A          117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNI-QAVSMDSIPL--QTYDLVINATSAGL  192 (272)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCE-EEEEGGGCCC--SCCSEEEECCCC--
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCe-EEeeHHHhcc--CCCCEEEECCCCCC
Confidence            34578999997 89999999999999999999999875432111 10100000 1111111110  37999999998654

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=98.05  E-value=9.2e-06  Score=52.70  Aligned_cols=68  Identities=22%  Similarity=0.307  Sum_probs=45.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+++|++.. +...... .    ...   ++.++++++|+|+.+.+..
T Consensus       148 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~~~g-~----~~~---~l~~~l~~aDvVil~vp~~  215 (334)
T 2dbq_A          148 VYGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVERELN-A----EFK---PLEDLLRESDFVVLAVPLT  215 (334)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHC-C----EEC---CHHHHHHHCSEEEECCCCC
T ss_pred             CCCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHhhcC-c----ccC---CHHHHHhhCCEEEECCCCC
Confidence            45679999996 999999999999999999999987653 1110000 0    111   2344556677776666554

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.05  E-value=1.5e-05  Score=52.15  Aligned_cols=75  Identities=20%  Similarity=0.217  Sum_probs=53.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ...+++|+|+ |.+|...++.+...|.+|+++++++.+.+... ... .....|+.+.+.+.+...++|+||.++|..
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG-a~~v~~~~~~~~~~~~~~~~D~vid~~g~~  262 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG-ADSFLVSRDQEQMQAAAGTLDGIIDTVSAV  262 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC-CSEEEETTCHHHHHHTTTCEEEEEECCSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC-CceEEeccCHHHHHHhhCCCCEEEECCCcH
Confidence            4468999996 99999999999889999999888775542211 111 111225556666666667899999999864

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=98.05  E-value=4.4e-05  Score=49.69  Aligned_cols=72  Identities=19%  Similarity=0.224  Sum_probs=49.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      |++|+|+|+ |..|..++..+.+.|+++++++.++..... ...+.........+.+.+....+++|+|+...+
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~-~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~   72 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIR-NYADEFYCFDVIKEPEKLLELSKRVDAVLPVNE   72 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTT-TTSSEEEECCTTTCHHHHHHHHTSSSEEEECCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhH-hhCCEEEECCCCcCHHHHHHHhcCCCEEEECCC
Confidence            479999996 999999999999999999999877644311 111111111234466677777788998876554

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=98.04  E-value=5.3e-06  Score=56.23  Aligned_cols=74  Identities=15%  Similarity=0.199  Sum_probs=48.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-cc---ccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EI---HKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~---~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |+|.|+|+ |.+|..++..|.++|++|.+++|++++.+..... ..   ...+....+.+++.+.++++|+||.+.+..
T Consensus         2 MkIgVIG~-G~mG~~lA~~La~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~~~~~~e~v~~l~~aDvVilaVp~~   79 (478)
T 1pgj_A            2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAG   79 (478)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCS
T ss_pred             CEEEEECh-HHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEEECCHHHHHhcccCCCEEEEecCCh
Confidence            37999996 9999999999999999999999886543211110 00   000112334444444444688888888774

>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}

Probab=98.03  E-value=1.1e-05  Score=51.47  Aligned_cols=73  Identities=11%  Similarity=0.126  Sum_probs=43.9

Q ss_pred             CCCCCeEEEEccCChhhHH-HHHHHHhC-CCeEE-EEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEccc
Q 046878            4 ENTKPKILIFGGTGYLGKY-MVKASVSS-GHNTF-VYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~-l~~~l~~~-~~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      .|++.+++|+|+ |.+|.. .++.|... +.++. +++++++..+...  .... ...+.+.+   +++.++|+|+.+.+
T Consensus         3 ~M~~~~igiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a--~~~~-~~~~~~~~---~ll~~~D~V~i~tp   75 (308)
T 3uuw_A            3 AMKNIKMGMIGL-GSIAQKAYLPILTKSERFEFVGAFTPNKVKREKIC--SDYR-IMPFDSIE---SLAKKCDCIFLHSS   75 (308)
T ss_dssp             --CCCEEEEECC-SHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHH--HHHT-CCBCSCHH---HHHTTCSEEEECCC
T ss_pred             ccccCcEEEEec-CHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHH--HHcC-CCCcCCHH---HHHhcCCEEEEeCC
Confidence            466789999997 999995 88888764 56776 4555543321111  1011 11244444   44458999999888


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      ...
T Consensus        76 ~~~   78 (308)
T 3uuw_A           76 TET   78 (308)
T ss_dssp             GGG
T ss_pred             cHh
Confidence            753

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=98.03  E-value=9e-06  Score=51.69  Aligned_cols=68  Identities=13%  Similarity=0.151  Sum_probs=47.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ...++++|+|+ |..|++++..|.+.|. +|+++.|+.++.+...  ....    ....+++.+ + ++|+||++.+.
T Consensus       120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La--~~~~----~~~~~~l~~-l-~~DivInaTp~  188 (282)
T 3fbt_A          120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIY--GEFK----VISYDELSN-L-KGDVIINCTPK  188 (282)
T ss_dssp             CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHC--TTSE----EEEHHHHTT-C-CCSEEEECSST
T ss_pred             ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH--HhcC----cccHHHHHh-c-cCCEEEECCcc
Confidence            34578999997 8999999999999997 8999999875431111  1111    112233334 4 89999999865

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=98.03  E-value=2.5e-05  Score=50.97  Aligned_cols=37  Identities=19%  Similarity=0.267  Sum_probs=32.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +..++++|+|. |.+|+.+++.|...|++|.+.+++..
T Consensus       166 l~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  202 (347)
T 1mx3_A          166 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS  202 (347)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             CCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcc
Confidence            55689999996 99999999999999999999887754

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=98.02  E-value=4.2e-05  Score=47.13  Aligned_cols=59  Identities=17%  Similarity=0.275  Sum_probs=39.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEE-EEEcCCCCcccccccccccccccccChHHHHHhh-ccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTF-VYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-KEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~-~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vv~~a~~~   82 (104)
                      ++|.++|+ |.+|+.+++.|...|+++. ++++++ +.   ..        .+.+.+   +++ .++|+|+.+++..
T Consensus         1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~-~~---~~--------~~~~~~---~l~~~~~DvVv~~~~~~   61 (236)
T 2dc1_A            1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRG-EH---EK--------MVRGID---EFLQREMDVAVEAASQQ   61 (236)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC-CC---TT--------EESSHH---HHTTSCCSEEEECSCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCc-ch---hh--------hcCCHH---HHhcCCCCEEEECCCHH
Confidence            37999997 9999999999998888874 555553 22   11        122332   333 5677777777653

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=98.02  E-value=8.9e-06  Score=53.07  Aligned_cols=78  Identities=14%  Similarity=0.131  Sum_probs=48.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCcccccc----ccccc--ccccccChHHHHHhhcc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTENSRTSK----LEIHK--EFQELDEHEKIISILKE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~~~~~~----~~~~~--~~~d~~~~~~~~~~~~~   71 (104)
                      |+..||.|+||+|.+|+.++..|.....       ++.+++..+... ..+.    +.+..  -.....-.....+++++
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~-~~~Gva~DL~~~~~~~~~~~~~~~~~~~a~~~  100 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALK-ALAGVEAELEDCAFPLLDKVVVTADPRVAFDG  100 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHHTTCTTEEEEEEESCHHHHTTT
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccc-cchhhhhhhhhcCccCCCcEEEcCChHHHhCC
Confidence            5556999999999999999988876432       577777654221 0000    01110  00011111234677999


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|+||.++|.+.
T Consensus       101 advVvi~aG~pr  112 (345)
T 4h7p_A          101 VAIAIMCGAFPR  112 (345)
T ss_dssp             CSEEEECCCCCC
T ss_pred             CCEEEECCCCCC
Confidence            999999999765

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=98.00  E-value=4.6e-06  Score=53.87  Aligned_cols=74  Identities=18%  Similarity=0.214  Sum_probs=48.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc-cccccc----cccccccChHHHHHhhccccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT-SKLEIH----KEFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~-~~~~~~----~~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      ++||.|+|+ |.+|..++..|...|+ +|.+++++++..+.. ......    .....+....++ ++++++|+||.++|
T Consensus         4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g   81 (322)
T 1t2d_A            4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG   81 (322)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence            468999998 9999999999999887 888888876544210 000000    000011111223 56899999999996


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      .+
T Consensus        82 ~p   83 (322)
T 1t2d_A           82 FT   83 (322)
T ss_dssp             CS
T ss_pred             CC
Confidence            65

>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}

Probab=97.99  E-value=4.3e-05  Score=51.03  Aligned_cols=37  Identities=19%  Similarity=0.161  Sum_probs=32.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +..++++|+|. |.+|+.+++.+...|++|.+.++++.
T Consensus       154 l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~yd~~~~  190 (416)
T 3k5p_A          154 VRGKTLGIVGY-GNIGSQVGNLAESLGMTVRYYDTSDK  190 (416)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred             CCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCcch
Confidence            45679999995 99999999999999999999998753

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.99  E-value=1e-05  Score=52.41  Aligned_cols=74  Identities=14%  Similarity=0.132  Sum_probs=48.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----cccc-ccc-cccccccChHHHHHhhccccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKL-EIH-KEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~-~~~-~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      ..+||.|+|+ |.+|+.++..|+..+.  ++.++++++++.+.    .... ... ....-..+.   .+.++++|+||.
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~a~~~aDvVvi   79 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YEDCKDADIVCI   79 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GGGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HHHhCCCCEEEE
Confidence            3468999996 9999999999998886  89999887543311    1110 110 000001111   346889999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|.+.
T Consensus        80 ~ag~p~   85 (326)
T 3pqe_A           80 CAGANQ   85 (326)
T ss_dssp             CCSCCC
T ss_pred             ecccCC
Confidence            998764

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=97.99  E-value=3.9e-06  Score=52.86  Aligned_cols=70  Identities=21%  Similarity=0.301  Sum_probs=45.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHHhhc-cccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-EVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vv~~a~~~~   83 (104)
                      ++|.|+|+ |.+|..++..|...|+  +|++++|+++..+..........  -..+   +.+.+. ++|+||.+.+...
T Consensus         2 ~~I~iIG~-G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~--~~~~---~~~~~~~~aDvVilavp~~~   74 (281)
T 2g5c_A            2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDE--GTTS---IAKVEDFSPDFVMLSSPVRT   74 (281)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSE--EESC---GGGGGGTCCSEEEECSCHHH
T ss_pred             cEEEEEec-CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCccc--ccCC---HHHHhcCCCCEEEEcCCHHH
Confidence            58999996 9999999999999998  89888887644321111110000  0111   233566 7888888877653

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.97  E-value=1.7e-05  Score=51.25  Aligned_cols=76  Identities=11%  Similarity=0.149  Sum_probs=50.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccC---hHHHHHhhc--cccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDE---HEKIISILK--EVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~--~~d~vv~~a~   80 (104)
                      ...+++|+|++|.+|...++.+...|.+|+++++++++.+....... ....|+.+   .+.+.+...  ++|+||.++|
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga-~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g  222 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA-AYVIDTSTAPLYETVMELTNGIGADAAIDSIG  222 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC-SEEEETTTSCHHHHHHHHTTTSCEEEEEESSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC-cEEEeCCcccHHHHHHHHhCCCCCcEEEECCC
Confidence            34689999998899999999888889999999988776532222111 11113333   223333332  6899999998


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus       223 ~~  224 (340)
T 3gms_A          223 GP  224 (340)
T ss_dssp             HH
T ss_pred             Ch
Confidence            64

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.97  E-value=5.4e-05  Score=48.46  Aligned_cols=60  Identities=12%  Similarity=0.289  Sum_probs=45.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+|++|.+|+.++..|...|..|+++.|+....                  + +.+.+.++|+||+++|.+.
T Consensus       163 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l------------------~-l~~~~~~ADIVI~Avg~p~  222 (300)
T 4a26_A          163 MAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTE------------------D-MIDYLRTADIVIAAMGQPG  222 (300)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHH------------------H-HHHHHHTCSEEEECSCCTT
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCc------------------h-hhhhhccCCEEEECCCCCC
Confidence            4668999999978899999999999999999887743211                  0 1256677888888887653

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	104
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	4e-10
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	5e-08
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	9e-08
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-07
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	4e-07
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	3e-06
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	1e-05
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	1e-05
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	2e-05
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-05
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	4e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	5e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	1e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-04
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	3e-04
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	3e-04
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	4e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	6e-04
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	7e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	8e-04
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	8e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	9e-04
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	0.001
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	0.002
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.003
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.004
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.004

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 52.9 bits (125), Expect = 4e-10
 Identities = 19/55 (34%), Positives = 35/55 (63%)

Query: 6  TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELD 60
          ++ +IL+ G TGY+G+++ KAS+  GH TF+  R  T +S + K ++ + F+   
Sbjct: 2  SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASG 56

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.2 bits (108), Expect = 5e-08
 Identities = 16/79 (20%), Positives = 27/79 (34%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
          KI IFG TG  G   +  +V +G+   V  R  +          H    ++ +   +   
Sbjct: 5  KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT 64

Query: 69 LKEVGVVISTVAYPQLLDQ 87
          +     VI  +     L  
Sbjct: 65 VAGQDAVIVLLGTRNDLSP 83

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 45.9 bits (107), Expect = 9e-08
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)

Query: 7  KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELD 60
          K ++LI GGTGY+GK +V AS+S GH T+V  RP    S   K+++   F++L 
Sbjct: 3  KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRP-EVVSNIDKVQMLLYFKQLG 55

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 45.0 bits (105), Expect = 2e-07
 Identities = 15/107 (14%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 5   NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRTSKLEIHKEFQELD--- 60
             K  I + G TG  G  +++ + + GH+            +   +   +    +     
Sbjct: 1   QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLN 60

Query: 61  ---EHEKIISILKEVGVVISTVAYPQLLDQLKIVDAIKVAGNIKVFV 104
                + +        +  ++ A  ++     + DA K AG I+ ++
Sbjct: 61  NVPLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYI 107

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 4e-07
 Identities = 19/70 (27%), Positives = 31/70 (44%)

Query: 7  KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKII 66
          + +ILI GG G++G ++    +  GH   V     T   R  +  I  E  EL  H+ + 
Sbjct: 1  RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVE 60

Query: 67 SILKEVGVVI 76
           +  EV  + 
Sbjct: 61 PLYIEVDQIY 70

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 41.7 bits (96), Expect = 3e-06
 Identities = 9/34 (26%), Positives = 17/34 (50%)

Query: 6  TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR 39
          T  ++L+ G TG  G++++   +S      V A 
Sbjct: 1  TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAP 34

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 39.8 bits (91), Expect = 1e-05
 Identities = 10/58 (17%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKII 66
           +L+ G  G++  ++V+  +  G+     AR     S+ + L+   + +     E  +
Sbjct: 13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARS---ASKLANLQKRWDAKYPGRFETAV 67

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.8 bits (91), Expect = 1e-05
 Identities = 6/31 (19%), Positives = 11/31 (35%)

Query: 8  PKILIFGGTGYLGKYMVKASVSSGHNTFVYA 38
          P +L+ G +G  G+ + K             
Sbjct: 4  PTVLVTGASGRTGQIVYKKLKEGSDKFVAKG 34

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 39.5 bits (91), Expect = 2e-05
 Identities = 12/67 (17%), Positives = 22/67 (32%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
          KI I G  G++  ++ +     GH          E+             +L   E  + +
Sbjct: 17 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV 76

Query: 69 LKEVGVV 75
           + V  V
Sbjct: 77 TEGVDHV 83

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 3e-05
 Identities = 7/33 (21%), Positives = 14/33 (42%)

Query: 6  TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA 38
              + I G +G  G+ ++K  +  G  + V  
Sbjct: 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTL 45

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 38.7 bits (88), Expect = 4e-05
 Identities = 9/31 (29%), Positives = 11/31 (35%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYAR 39
          KILI G  G LG+ + K              
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDV 33

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 38.3 bits (87), Expect = 5e-05
 Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 1/50 (2%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYAR-PVTENSRTSKLEIHKEFQ 57
          ++ + G TG+ G ++     + G     Y+    T  S      +    Q
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQ 59

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 37.2 bits (84), Expect = 1e-04
 Identities = 8/31 (25%), Positives = 15/31 (48%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYAR 39
           IL+FG TG +G  + ++    G+   +   
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVH 32

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 36.2 bits (82), Expect = 3e-04
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 4/57 (7%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKI 65
          K+LI GG G+LG  +   ++S G +  V+       SR    +       L   E +
Sbjct: 2  KLLITGGCGFLGSNLASFALSQGIDLIVFDN----LSRKGATDNLHWLSSLGNFEFV 54

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 36.1 bits (81), Expect = 3e-04
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELD--EHEKII 66
          ++LI G  G++G ++ +  +   H         ++         H  F E D   H + I
Sbjct: 2  RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWI 61

Query: 67 SILKE 71
              +
Sbjct: 62 EYHVK 66

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 36.0 bits (82), Expect = 3e-04
 Identities = 7/31 (22%), Positives = 12/31 (38%)

Query: 7  KPKILIFGGTGYLGKYMVKASVSSGHNTFVY 37
          K ++ I G  G +G  + +     G    V 
Sbjct: 2  KQRVFIAGHRGMVGSAIRRQLEQRGDVELVL 32

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 35.8 bits (81), Expect = 4e-04
 Identities = 11/59 (18%), Positives = 20/59 (33%), Gaps = 1/59 (1%)

Query: 7  KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKI 65
          +   LI G TG  G Y+ +  +  G+      R  + N  T ++              +
Sbjct: 1  RKIALITGITGQDGSYLTEFLLGKGYEVHGLIR-RSSNFNTQRINHIYIDPHNVNKALM 58

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 35.1 bits (80), Expect = 5e-04
 Identities = 16/64 (25%), Positives = 26/64 (40%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
          KILI GG G++G  +V+  + +  +T V    +T       L    E    +     I  
Sbjct: 2  KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 69 LKEV 72
            E+
Sbjct: 62 SAEI 65

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.4 bits (80), Expect = 6e-04
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKLEIHKEFQ 57
            L+ G TG  G Y+ K  +  G+         + ++  R  +L I  + Q
Sbjct: 2  SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQ 52

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (79), Expect = 7e-04
 Identities = 11/60 (18%), Positives = 20/60 (33%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
          K+L+ GG GY+G + V   + +G+   V             L       +      +   
Sbjct: 4  KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFE 63

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.9 bits (78), Expect = 8e-04
 Identities = 5/29 (17%), Positives = 11/29 (37%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVY 37
          ++++ GG GY G           +   + 
Sbjct: 3  RVMVIGGDGYCGWATALHLSKKNYEVCIV 31

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score = 34.8 bits (79), Expect = 8e-04
 Identities = 9/60 (15%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
          ++L+ GG G++G + V+  ++  +        +  +S T           +D   ++  +
Sbjct: 2  RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGN-RANLAPVDADPRLRFV 60

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 34.6 bits (78), Expect = 9e-04
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYAR 39
           I++ GG G++G   V    ++  +  V   
Sbjct: 4  NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVL 34

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 34.6 bits (78), Expect = 0.001
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 5/52 (9%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELD 60
          ++L+ GG+GY+G +     + +GH+  +      +N   SK  +    + L 
Sbjct: 2  RVLVTGGSGYIGSHTCVQLLQNGHDVIIL-----DNLCNSKRSVLPVIERLG 48

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 33.8 bits (75), Expect = 0.002
 Identities = 13/61 (21%), Positives = 28/61 (45%)

Query: 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL 69
          I++ GG G++G  +VKA    G    +    + + ++   L        +D+ + +I I+
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIM 61

Query: 70 K 70
           
Sbjct: 62 A 62

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 33.2 bits (75), Expect = 0.003
 Identities = 10/58 (17%), Positives = 21/58 (36%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKII 66
            LI G TG  G Y+ +  +  G+      R  +  +      I+++    +    + 
Sbjct: 3  VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLH 60

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 33.0 bits (74), Expect = 0.004
 Identities = 9/60 (15%), Positives = 19/60 (31%)

Query: 9  KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI 68
            LI G  G++G  +++  +             T + R          ++   + K I  
Sbjct: 18 VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQG 77

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.7 bits (73), Expect = 0.004
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 5/54 (9%)

Query: 10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE 63
          +L+ GG GY+G + V   + +G++  V      +N   S  +     + L +H 
Sbjct: 4  VLVTGGAGYIGSHTVVELIENGYDCVVA-----DNLSNSTYDSVARLEVLTKHH 52

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	104
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.87
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.78
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.75
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.75
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.68
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.67
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.66
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.65
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.65
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.64
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.63
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.62
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.6
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.6
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.6
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.59
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.59
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.57
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.57
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.56
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.56
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.56
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.55
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.55
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.54
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.54
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.53
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.53
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.46
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.45
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.44
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.39
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.36
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.35
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.33
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.32
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.32
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.31
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.31
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.29
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.28
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.28
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.27
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.27
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.27
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.27
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.26
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.26
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.26
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.26
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.24
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.22
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.22
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.22
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.22
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.21
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.21
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.21
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.21
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.21
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.2
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.19
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.19
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.19
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.19
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.19
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.18
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.17
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.17
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.17
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.16
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.15
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.14
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.13
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.12
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.11
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.11
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.06
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.03
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.02
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.02
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	98.98
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.95
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.95
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	98.95
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	98.92
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.92
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	98.91
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	98.91
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	98.91
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.9
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	98.88
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	98.84
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	98.84
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	98.81
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	98.81
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.79
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	98.77
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	98.77
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	98.76
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	98.76
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	98.76
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	98.74
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	98.73
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	98.72
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	98.7
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	98.7
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	98.69
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.66
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	98.65
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.64
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	98.61
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	98.61
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	98.58
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.55
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	98.54
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	98.51
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	98.49
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	98.46
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.46
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	98.44
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	98.43
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	98.41
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.4
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	98.39
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	98.38
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	98.38
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.38
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	98.38
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	98.34
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	98.33
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	98.32
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.3
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.3
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	98.27
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	98.27
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.26
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	98.25
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.23
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.22
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	98.22
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	98.21
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	98.19
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	98.18
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	98.18
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	98.16
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.16
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.15
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.13
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	98.12
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	98.12
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.12
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	98.11
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.09
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	98.08
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	98.08
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	98.08
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	98.07
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	98.06
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	98.06
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.03
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.02
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	98.02
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.0
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.0
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.96
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	97.96
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.96
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.94
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.94
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.93
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	97.92
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	97.89
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.88
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.86
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.85
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	97.83
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	97.83
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.82
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	97.81
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	97.81
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.8
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	97.8
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	97.79
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	97.78
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	97.77
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	97.77
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	97.76
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.76
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	97.76
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	97.76
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	97.74
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	97.73
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.72
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	97.72
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	97.72
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	97.7
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	97.67
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	97.66
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	97.66
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	97.66
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.65
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.65
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	97.64
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	97.64
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	97.63
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	97.63
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	97.62
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	97.61
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.61
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	97.6
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	97.6
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	97.57
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	97.55
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	97.55
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	97.52
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	97.51
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	97.49
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	97.48
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	97.47
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	97.46
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.43
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	97.43
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.43
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	97.42
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	97.42
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	97.4
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.4
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	97.38
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.38
d1lc0a1	172	Biliverdin reductase {Rat (Rattus norvegicus) [Tax	97.38
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	97.37
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	97.36
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	97.34
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	97.33
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	97.33
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	97.32
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	97.31
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	97.28
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	97.26
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.26
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	97.25
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	97.2
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	97.19
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.17
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	97.17
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	97.16
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.14
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	97.13
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	97.11
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	97.11
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	97.1
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	97.07
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	97.07
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	97.06
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	97.04
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	97.03
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	97.03
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.98
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	96.98
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	96.96
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	96.95
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.94
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	96.93
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	96.93
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	96.93
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	96.92
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	96.92
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	96.91
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.9
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	96.87
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	96.86
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.82
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	96.79
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	96.71
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	96.65
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	96.65
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	96.64
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.64
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	96.6
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.57
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.56
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	96.54
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	96.53
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.51
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.45
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	96.37
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	96.35
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	96.33
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	96.31
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	96.26
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	96.26
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	96.23
d1ofua1	198	Cell-division protein FtsZ {Pseudomonas aeruginosa	96.19
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	96.18
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	96.04
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	96.03
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	95.96
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	95.82
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	95.66
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	95.56
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	95.53
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	95.48
d1ebfa1	168	Homoserine dehydrogenase {Baker's yeast (Saccharom	95.48
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	95.46
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.42
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	95.39
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	95.32
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	95.3
d1rq2a1	198	Cell-division protein FtsZ {Mycobacterium tubercul	95.24
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	95.17
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	95.11
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	95.08
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	95.08
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	95.04
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	95.0
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	95.0
d1vl6a1	222	Malate oxidoreductase (malic enzyme) {Thermotoga m	94.95
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.75
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	94.71
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	94.65
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	94.64
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	94.62
d1qmga2	226	Class II ketol-acid reductoisomerase (KARI) {Spina	94.5
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	94.47
d2py6a1	395	Methyltransferase FkbM {Methylobacillus flagellatu	94.45
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	94.43
d1trba2	126	Thioredoxin reductase {Escherichia coli [TaxId: 56	94.41
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	94.35
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	94.22
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	94.2
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	94.19
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	94.08
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	93.92
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.87
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	93.65
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.6
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	93.48
d1neka2	330	Succinate dehydogenase {Escherichia coli [TaxId: 5	93.46
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	93.46
d3bswa1	193	Acetyltransferase PglD {Campylobacter jejuni [TaxI	93.44
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.42
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	93.39
d2h1qa1	251	Hypothetical protein Dhaf_3308 {Desulfitobacterium	93.33
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	93.33
d1fl2a2	126	Alkyl hydroperoxide reductase subunit F (AhpF), C-	93.3
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.14
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	93.08
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.03
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	92.91
d1ihua1	296	Arsenite-translocating ATPase ArsA {Escherichia co	92.8
d1vdca2	130	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	92.72
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	92.7
d1lqta1	216	Ferredoxin:NADP reductase FprA {Mycobacterium tube	92.54
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	92.45
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	92.4
d2afhe1	289	Nitrogenase iron protein {Azotobacter vinelandii [	92.39
d1pj3a1	294	Mitochondrial NAD(P)-dependent malic enzyme {Human	92.36
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	92.31
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	92.27
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	92.2
d1pg5a2	153	Aspartate carbamoyltransferase catalytic subunit {	91.97
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	91.94
d1mo9a1	261	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	91.93
d1hdgo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.86
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.86
d1gpea1	391	Glucose oxidase {Penicillium amagasakiense [TaxId:	91.83
d1cjca1	225	Adrenodoxin reductase of mitochondrial p450 system	91.8
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	91.73
d1vlva2	161	Ornithine transcarbamoylase {Thermotoga maritima [	91.7
d3cmco1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.66
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	91.57
d2gjca1	311	Thiazole biosynthetic enzyme Thi4 {Baker's yeast (	91.49
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	91.41
d2fzva1	233	Putative arsenical resistance protein {Shigella fl	91.39
d1rm4a1	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.36
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	91.2
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	90.85
d1cf3a1	385	Glucose oxidase {Aspergillus niger [TaxId: 5061]}	90.79
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	90.56
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.52
d1euca1	130	Succinyl-CoA synthetase, alpha-chain, N-terminal (	90.44
d1nni1_	171	Azobenzene reductase {Bacillus subtilis [TaxId: 14	90.3
d2j9ga2	114	Biotin carboxylase (BC), N-terminal domain {Escher	90.26
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	90.22
d1iira_	401	UDP-glucosyltransferase GtfB {Amycolatopsis orient	90.1
d1ydga_	201	Trp repressor binding protein WrbA {Deinococcus ra	89.54
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	89.15
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	88.54
d1ml4a2	157	Aspartate carbamoyltransferase catalytic subunit {	88.45
d1gq2a1	298	Mitochondrial NAD(P)-dependent malic enzyme {Domes	88.45
d1ulza2	114	Biotin carboxylase (BC), N-terminal domain {Aquife	88.29
d1ju2a1	351	Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxI	88.14
d1iowa1	96	D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge	87.61
d1ekxa2	160	Aspartate carbamoyltransferase catalytic subunit {	87.42
d1rtta_	174	Hypothetical protein PA1204 {Pseudomonas aeruginos	87.3
d2nu7a1	119	Succinyl-CoA synthetase, alpha-chain, N-terminal (	87.27
d1t0ia_	185	Hypothetical protein Ylr011wp {Baker's yeast (Sacc	87.0
d1dxha2	185	Ornithine transcarbamoylase {Pseudomonas aeruginos	86.5
d1sqsa_	232	Hypothetical protein SP1951 {(Streptococcus pneumo	86.45
d1o0sa1	308	Mitochondrial NAD(P)-dependent malic enzyme {Pig r	86.16
d1rrva_	401	TDP-vancosaminyltransferase GftD {Amycolatopsis or	86.07
d2at2a2	151	Aspartate carbamoyltransferase catalytic subunit {	85.58
d1jnra2	356	Adenylylsulfate reductase A subunit {Archaeon Arch	85.52
d2qwxa1	230	Quinone reductase type 2 (menadione reductase) {Hu	85.27
d1otha2	170	Ornithine transcarbamoylase {Human (Homo sapiens)	85.19
d1chua2	305	L-aspartate oxidase {Escherichia coli [TaxId: 562]	85.1
d1q7ea_	417	Hypothetical protein YfdW {Escherichia coli [TaxId	84.9
d1p3y1_	183	MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}	84.83
d2cula1	230	GidA-related protein TTHA1897 {Thermus thermophilu	84.46
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	83.01
d1xjca_	165	Molybdopterin-guanine dinucleotide biosynthesis pr	82.57
d1oi7a1	121	Succinyl-CoA synthetase, alpha-chain, N-terminal (	82.49
d1jeoa_	177	Probable 3-hexulose-6-phosphate isomerase MJ1247 {	81.93
d1kf6a2	311	Fumarate reductase {Escherichia coli [TaxId: 562]}	81.41
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	80.98
d1mv8a3	136	GDP-mannose 6-dehydrogenase, GDP-binding domain {P	80.74

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=1.4e-21  Score=117.52  Aligned_cols=99  Identities=21%  Similarity=0.228  Sum_probs=79.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC-
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ-   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~-   83 (104)
                      |.++||+|+||||++|++++++|+++|++|+++.|++++.+............|+.|++++.++++++|+|||++|... 
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~   80 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND   80 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccccccccccccchhhHHHHhcCCCEEEEEeccCCc
Confidence            5678999999999999999999999999999999988765322111111112399999999999999999999998753 


Q ss_pred             -------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                             ...+.++++++++++ ++|||
T Consensus        81 ~~~~~~~~~~~~~l~~aa~~~~-v~r~i  107 (205)
T d1hdoa_          81 LSPTTVMSEGARNIVAAMKAHG-VDKVV  107 (205)
T ss_dssp             CSCCCHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             hhhhhhhHHHHHHHHHHHHhcC-CCeEE
Confidence                   456779999999997 88874

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=3.8e-19  Score=108.54  Aligned_cols=99  Identities=16%  Similarity=0.217  Sum_probs=77.0

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccccccccccc-ccccccChHHHHHhhccccEEEEccc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHK-EFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      .|++++|+|+||||++|++++++|+++|.  +|++++|++...... ...... ...|+.+.+++.++++++|++||++|
T Consensus        11 ~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~   89 (232)
T d2bkaa1          11 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLG   89 (232)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeeccccccccccccccccccccccc
Confidence            36678999999999999999999999884  799999987654221 222222 22388888899999999999999998


Q ss_pred             CcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           81 YPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        81 ~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ...            +..+.+++++|.+.+ +++||
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi  124 (232)
T d2bkaa1          90 TTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFN  124 (232)
T ss_dssp             CCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEE
T ss_pred             ccccccchhhhhhhcccccceeeecccccC-ccccc
Confidence            753            345678999998887 88864

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=8.7e-18  Score=107.74  Aligned_cols=98  Identities=18%  Similarity=0.259  Sum_probs=74.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC--
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ--   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~--   83 (104)
                      +.|||+||||+||+|++++++|+++|++|+++++..............-...|+.+.+.+.+.++++|.|+|+++...  
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~~~~~   93 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGM   93 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHHHTTCSEEEECCCCCCCH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccCcEEEeechhHHHHHHHhhcCCeEeecccccccc
Confidence            457899999999999999999999999999998765443111111111112388888889888999999999997654  


Q ss_pred             --------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                    ...+.++++++.+.+ ++|||
T Consensus        94 ~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i  127 (363)
T d2c5aa1          94 GFIQSNHSVIMYNNTMISFNMIEAARING-IKRFF  127 (363)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEE
T ss_pred             cccccccccccccccchhhHHHHhHHhhC-ccccc
Confidence                          345678999999887 88864

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=4.3e-18  Score=108.48  Aligned_cols=96  Identities=19%  Similarity=0.416  Sum_probs=73.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cc---cc--cccccc-ccccChHHHHHhhc--cccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TS---KL--EIHKEF-QELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~---~~--~~~~~~-~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      |||+||||+||+|+++++.|+++|++|++++|....... ..   +.  .....+ .|+.|.+.+.++++  ++|+|||+
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl   80 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF   80 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence            579999999999999999999999999999874332211 01   10  111111 38999999999987  68999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+...               +.++.+++++|++.+ ++++|
T Consensus        81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i  120 (338)
T d1udca_          81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFI  120 (338)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEE
Confidence            98754               456779999999987 88864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.68  E-value=7.9e-17  Score=101.76  Aligned_cols=94  Identities=15%  Similarity=0.281  Sum_probs=69.3

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--cccccc---ccccc-cccccChHHHHHhhccc--cEEEEccc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRTSKL---EIHKE-FQELDEHEKIISILKEV--GVVISTVA   80 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~~~~---~~~~~-~~d~~~~~~~~~~~~~~--d~vv~~a~   80 (104)
                      ||+||||+||+|++++++|+++|++|+++++-....  ......   ..... ..|+.+.+.+.++++++  |+|||+|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa   81 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence            799999999999999999999999999987532221  000111   11111 13899999999998765  99999998


Q ss_pred             CcC---------------hhhHHHHHHHHHHhCCcccC
Q 046878           81 YPQ---------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        81 ~~~---------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                      ...               +.++.++++++.+.+ ++++
T Consensus        82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~  118 (338)
T d1orra_          82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCN  118 (338)
T ss_dssp             CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCE
T ss_pred             cccccccccChHHHHHHHHHHHHHHHHhhhccc-cccc
Confidence            764               456779999999887 5553

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=6.2e-17  Score=102.23  Aligned_cols=90  Identities=22%  Similarity=0.332  Sum_probs=64.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccc-cccc-ccccChHHHHHhhccccEEEEcccCcC-
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEI-HKEF-QELDEHEKIISILKEVGVVISTVAYPQ-   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~-~~~~-~d~~~~~~~~~~~~~~d~vv~~a~~~~-   83 (104)
                      ++||+||||+||+|+++++.|+++|++|+++++......  ..... .... .|+.+.+.+..++.++|+|||+|+... 
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~   78 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRK--RNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASP   78 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG--GGTGGGTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCH--HHHHHhcCCCceEEEehHHHHHHHcCCCEEEECcccCCc
Confidence            368999999999999999999999999999987443321  11111 1111 145555555666778999999998754 


Q ss_pred             --------------hhhHHHHHHHHHHhC
Q 046878           84 --------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~   98 (104)
                                    +..+.++++++.+.+
T Consensus        79 ~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~  107 (312)
T d2b69a1          79 PNYMYNPIKTLKTNTIGTLNMLGLAKRVG  107 (312)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhHHhCHHHHHHHHHHHHHHHHHHHHHcC
Confidence                          335679999999886

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.66  E-value=2e-16  Score=100.90  Aligned_cols=96  Identities=17%  Similarity=0.275  Sum_probs=71.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc----ccc--ccccc-ccccccChHHHHHhhc--cccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR----TSK--LEIHK-EFQELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~----~~~--~~~~~-~~~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      |.|+||||+||+|+++++.|+++|++|+++++.......    ...  ..... ...|+.|.+.+.+++.  ++|+|||+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            469999999999999999999999999998764322110    000  01111 1138999999999876  68999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      |+...               +..+.++++++++.+ +++||
T Consensus        82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i  121 (347)
T d1z45a2          82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFV  121 (347)
T ss_dssp             CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEE
T ss_pred             cccccccccccCcccccccchhhhHHHHHHHHhcc-cceEE
Confidence            99754               345678999999887 88764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=4.6e-16  Score=98.89  Aligned_cols=94  Identities=17%  Similarity=0.244  Sum_probs=66.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccccccccccccc-ccccChHHHHH-hhccccEEEEcccCcC-
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIIS-ILKEVGVVISTVAYPQ-   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~-~~~~~d~vv~~a~~~~-   83 (104)
                      |||+||||+||+|++++++|+++| ++|+++++................+ .|+.+.+++.+ .++++|+|||+|+... 
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~~   80 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAIATP   80 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCCCCH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCccccccccccc
Confidence            489999999999999999999998 5899998765433111111111111 27766655544 6778999999999865 


Q ss_pred             --------------hhhHHHHHHHHHHhCCccc
Q 046878           84 --------------LLDQLKIVDAIKVAGNIKV  102 (104)
Q Consensus        84 --------------~~~~~~l~~~~~~~~~v~~  102 (104)
                                    ..++.++++++.+.+ ++.
T Consensus        81 ~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~~~  112 (342)
T d2blla1          81 IEYTRNPLRVFELDFEENLRIIRYCVKYR-KRI  112 (342)
T ss_dssp             HHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEE
T ss_pred             cccccCCcccccccccccccccccccccc-ccc
Confidence                          345778999988776 443

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.65  E-value=4e-16  Score=100.08  Aligned_cols=91  Identities=23%  Similarity=0.365  Sum_probs=65.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--ccccc--------ccccc-cccccChHHHHHhhccc--cE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKL--------EIHKE-FQELDEHEKIISILKEV--GV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~--------~~~~~-~~d~~~~~~~~~~~~~~--d~   74 (104)
                      ++++||||+||+|++++++|+++|++|++++|.+....  .....        ..... ..|+.|.+++.+.++++  |+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            57889999999999999999999999999998653220  00000        00111 12889999999999865  99


Q ss_pred             EEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878           75 VISTVAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        75 vv~~a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      |+|+|+...               +.++.++++++++.+
T Consensus        82 v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~  120 (357)
T d1db3a_          82 VYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG  120 (357)
T ss_dssp             EEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             EEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhC
Confidence            999998753               345789999998865

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.64  E-value=3.6e-16  Score=97.01  Aligned_cols=96  Identities=36%  Similarity=0.573  Sum_probs=75.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc--------cccc-cccccChHHHHHhhccccEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE--------IHKE-FQELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~--------~~~~-~~d~~~~~~~~~~~~~~d~vv   76 (104)
                      +++||+||||||++|+++++.|+++|++|++++|++..........        .... ..|+.+.+.+.+.+.+++.++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi   81 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI   81 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence            3579999999999999999999999999999999866542221111        0111 128888899999999999999


Q ss_pred             EcccCcChhhHHHHHHHHHHhCCccc
Q 046878           77 STVAYPQLLDQLKIVDAIKVAGNIKV  102 (104)
Q Consensus        77 ~~a~~~~~~~~~~l~~~~~~~~~v~~  102 (104)
                      |+++......+.++++++...+ +++
T Consensus        82 ~~~~~~~~~~~~~~~~a~~~~~-~~~  106 (307)
T d1qyca_          82 STVGSLQIESQVNIIKAIKEVG-TVK  106 (307)
T ss_dssp             ECCCGGGSGGGHHHHHHHHHHC-CCS
T ss_pred             ecccccccchhhHHHHHHHHhc-ccc
Confidence            9999888888889999988876 444

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.63  E-value=1.2e-16  Score=102.00  Aligned_cols=98  Identities=15%  Similarity=0.193  Sum_probs=73.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc------cccc--cccccccChHHHHHhhccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK------LEIH--KEFQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~------~~~~--~~~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      .++|+||||+||+|++++++|+++|++|.++.|+..+......      ....  ....|+.+.+++.+++.++|.|+|+
T Consensus        11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~   90 (342)
T d1y1pa1          11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHI   90 (342)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEEC
T ss_pred             cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhh
Confidence            4799999999999999999999999999999987543311100      0000  1123888888999999999999999


Q ss_pred             ccCcC------------hhhHHHHHHHHHHhCCcccCC
Q 046878           79 VAYPQ------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        79 a~~~~------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ++...            +.++.+++++|.+.+.+++||
T Consensus        91 a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i  128 (342)
T d1y1pa1          91 ASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFV  128 (342)
T ss_dssp             CCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEE
T ss_pred             cccccccccccccccchhhhHHHHHHhhhccccccccc
Confidence            98754            346789999888764477764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.62  E-value=2.8e-15  Score=95.48  Aligned_cols=93  Identities=15%  Similarity=0.330  Sum_probs=70.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc---ccccc-ccccccChHHHHHhhc--cccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK---LEIHK-EFQELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~---~~~~~-~~~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      +.+||+||||+||+|+++++.|+++|++|.+++|+....... ..   .+... ...|+.|++.+.++++  .+|+|+|+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            458999999999999999999999999999999987654211 00   11111 1238999999999876  46999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHhC
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      ++...               +.++.++++++.+.+
T Consensus        87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~  121 (356)
T d1rkxa_          87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVG  121 (356)
T ss_dssp             CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred             hccccccccccCCccccccccccchhhhhhhhccc
Confidence            99764               334678888888775

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.4e-15  Score=94.49  Aligned_cols=96  Identities=19%  Similarity=0.304  Sum_probs=69.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc----cc---cccc-----cccc-ccccChHHHHHhhcc--c
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR----TS---KLEI-----HKEF-QELDEHEKIISILKE--V   72 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~----~~---~~~~-----~~~~-~d~~~~~~~~~~~~~--~   72 (104)
                      +||+||||+||+|++|+++|+++|++|+++++.......    ..   ....     ...+ .|+.|.+.+.+.+.+  .
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~   82 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSF   82 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccccc
Confidence            589999999999999999999999999999763222110    00   0000     1111 288999999998765  5


Q ss_pred             cEEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           73 GVVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        73 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      ++++|+|+...               +.++.++++++.+.+ +++|+
T Consensus        83 ~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i  128 (346)
T d1ek6a_          83 MAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLV  128 (346)
T ss_dssp             EEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             ccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-ccccc
Confidence            68999999765               345678999998887 88764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.60  E-value=2e-15  Score=97.56  Aligned_cols=91  Identities=14%  Similarity=0.217  Sum_probs=65.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC----------CCCcc----ccccc--------ccccc-cccccChHH
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARP----------VTENS----RTSKL--------EIHKE-FQELDEHEK   64 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~----------~~~~~----~~~~~--------~~~~~-~~d~~~~~~   64 (104)
                      |||+||||+||+|++++++|++.|++|++++.-          .....    .....        ....- ..|+.|.+.
T Consensus         2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~   81 (393)
T d1i24a_           2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF   81 (393)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence            689999999999999999999999999998621          00000    00000        00111 138999999


Q ss_pred             HHHhhcc--ccEEEEcccCcC------------------hhhHHHHHHHHHHhC
Q 046878           65 IISILKE--VGVVISTVAYPQ------------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        65 ~~~~~~~--~d~vv~~a~~~~------------------~~~~~~l~~~~~~~~   98 (104)
                      +.+++.+  +|+|||+|+...                  +.++.++++++.+.+
T Consensus        82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~  135 (393)
T d1i24a_          82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG  135 (393)
T ss_dssp             HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhc
Confidence            9999975  599999998643                  345778999998876

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.60  E-value=2.4e-15  Score=93.79  Aligned_cols=96  Identities=48%  Similarity=0.691  Sum_probs=72.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--ccc-----ccccc-cccccChHHHHHhhccccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--SKL-----EIHKE-FQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--~~~-----~~~~~-~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +++||+|+||||++|++++++|+++|++|++++|++......  ...     ..... ..|+.+.+.+.+.+.+.+.+++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~   81 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS   81 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence            456899999999999999999999999999999976543211  000     00111 1288999999999999999999


Q ss_pred             cccCcC----hhhHHHHHHHHHHhCCcc
Q 046878           78 TVAYPQ----LLDQLKIVDAIKVAGNIK  101 (104)
Q Consensus        78 ~a~~~~----~~~~~~l~~~~~~~~~v~  101 (104)
                      +++...    ...+.++++++.+.+..+
T Consensus        82 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~  109 (312)
T d1qyda_          82 ALAGGVLSHHILEQLKLVEAIKEAGNIK  109 (312)
T ss_dssp             CCCCSSSSTTTTTHHHHHHHHHHSCCCS
T ss_pred             hhhhcccccchhhhhHHHHHHHHhcCCc
Confidence            998654    456678888888776333

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.59  E-value=3.8e-15  Score=95.68  Aligned_cols=90  Identities=18%  Similarity=0.334  Sum_probs=62.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEE-EEEcCCCCcc--cccccc---ccc-ccccccChHHHHHhhc--cccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTF-VYARPVTENS--RTSKLE---IHK-EFQELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~-~~~r~~~~~~--~~~~~~---~~~-~~~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      |||+||||+||+|++|+++|++.|++++ ++++......  ......   ... ...|+.|.+.+.+++.  ++|+|||+
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   80 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL   80 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence            4899999999999999999999998754 4444322210  000110   011 0128999999998886  47999999


Q ss_pred             ccCcC---------------hhhHHHHHHHHHHh
Q 046878           79 VAYPQ---------------LLDQLKIVDAIKVA   97 (104)
Q Consensus        79 a~~~~---------------~~~~~~l~~~~~~~   97 (104)
                      |+...               +.++.+++++|.+.
T Consensus        81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~  114 (361)
T d1kewa_          81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKY  114 (361)
T ss_dssp             CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHH
T ss_pred             ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHh
Confidence            99755               23466888888765

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.59  E-value=5.1e-15  Score=94.28  Aligned_cols=92  Identities=13%  Similarity=0.244  Sum_probs=67.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccc-----cccc-cccccChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLE-----IHKE-FQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~-----~~~~-~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      ||+|+|||||||+|++++++|+++|++|.++.++...... .....     .... ..|+.|.+.+.+++..++.|+|+|
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~a   81 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA   81 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhhh
Confidence            5799999999999999999999999887666654322100 01100     1111 138899999999999999999999


Q ss_pred             cCcC---------------hhhHHHHHHHHHHhC
Q 046878           80 AYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        80 ~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      +...               +..+.++++++...+
T Consensus        82 ~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~  115 (346)
T d1oc2a_          82 AESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD  115 (346)
T ss_dssp             SCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT
T ss_pred             hcccccchhhCcccceeeehHhHHhhhhhhcccc
Confidence            8754               345778888888776

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=5.6e-15  Score=92.80  Aligned_cols=83  Identities=14%  Similarity=0.233  Sum_probs=65.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC-
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ-   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~-   83 (104)
                      ++||+||||+||+|++|+++|+++|+.+.+++++.+              .|+.+.+.+.+.+.  .+|.|+|+++... 
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~--------------~~~~~~~~~~~~~~~~~~d~v~~~a~~~~~   67 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE--------------LNLLDSRAVHDFFASERIDQVYLAAAKVGG   67 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT--------------CCTTCHHHHHHHHHHHCCSEEEECCCCCCC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh--------------ccccCHHHHHHHHhhcCCCEEEEcchhccc
Confidence            468999999999999999999999998876654431              25677777777765  4799999996643 


Q ss_pred             ---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 ---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                     +..+.++++++.+.+ ++|||
T Consensus        68 ~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i  102 (315)
T d1e6ua_          68 IVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLL  102 (315)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEE
T ss_pred             cccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEE
Confidence                           456779999999887 88874

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.57  E-value=1.2e-14  Score=92.69  Aligned_cols=97  Identities=14%  Similarity=0.155  Sum_probs=71.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc--ccccccc-cccccChH-HHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS--KLEIHKE-FQELDEHE-KIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~--~~~~~~~-~~d~~~~~-~~~~~~~~~d~vv~~a~~   81 (104)
                      ++++|+||||||++|+++++.|+++|++|+++.|++.......  ....... ..|+.|.. .+..++.++|.++.....
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~   81 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   81 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence            5679999999999999999999999999999999876542111  1111111 12777744 567788999998887765


Q ss_pred             cC---hhhHHHHHHHHHHhCCcccC
Q 046878           82 PQ---LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        82 ~~---~~~~~~l~~~~~~~~~v~~~  103 (104)
                      ..   ...+.++++++.+++ ++++
T Consensus        82 ~~~~~~~~~~~~~~aa~~ag-v~~~  105 (350)
T d1xgka_          82 QAGDEIAIGKDLADAAKRAG-TIQH  105 (350)
T ss_dssp             TTSCHHHHHHHHHHHHHHHS-CCSE
T ss_pred             ccchhhhhhhHHHHHHHHhC-CCce
Confidence            43   456789999999987 5553

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.56  E-value=2.7e-14  Score=91.96  Aligned_cols=95  Identities=15%  Similarity=0.346  Sum_probs=66.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHh-CCCeEEEEEcC---CCCccccc------------------cccccc--ccccccChH
Q 046878            8 PKILIFGGTGYLGKYMVKASVS-SGHNTFVYARP---VTENSRTS------------------KLEIHK--EFQELDEHE   63 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~~r~---~~~~~~~~------------------~~~~~~--~~~d~~~~~   63 (104)
                      |||+||||+||+|++|+++|++ .|++|+++++-   ........                  ......  ...|+.|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            5899999999999999999986 68999998741   11110000                  000000  112889988


Q ss_pred             HHHHhhc---cccEEEEcccCcC---------------hhhHHHHHHHHHHhCCcccC
Q 046878           64 KIISILK---EVGVVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        64 ~~~~~~~---~~d~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~  103 (104)
                      .+.++++   ++|+|||+|+...               ...+.++++++.+.+ ++++
T Consensus        83 ~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~  139 (383)
T d1gy8a_          83 FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKI  139 (383)
T ss_dssp             HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEE
T ss_pred             HhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Cccc
Confidence            8888875   5799999999754               345678888888876 5554

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.56  E-value=2.8e-14  Score=90.23  Aligned_cols=77  Identities=17%  Similarity=0.218  Sum_probs=56.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc--cccccc-------cc---cccccccChHHHHHhhc--cc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS--RTSKLE-------IH---KEFQELDEHEKIISILK--EV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~--~~~~~~-------~~---~~~~d~~~~~~~~~~~~--~~   72 (104)
                      +++++|||||||+|++|++.|+++|++|++++|......  ......       ..   -...|+.+.+.+.+.+.  ++
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~   80 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP   80 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence            368999999999999999999999999999999654221  001100       00   00128888888888875  56


Q ss_pred             cEEEEcccCcC
Q 046878           73 GVVISTVAYPQ   83 (104)
Q Consensus        73 d~vv~~a~~~~   83 (104)
                      |+|+|+|+...
T Consensus        81 D~Vih~Aa~~~   91 (339)
T d1n7ha_          81 DEVYNLAAQSH   91 (339)
T ss_dssp             SEEEECCSCCC
T ss_pred             chhhhcccccc
Confidence            99999999754

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.56  E-value=1.1e-14  Score=92.49  Aligned_cols=99  Identities=15%  Similarity=0.170  Sum_probs=73.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cc---------ccccccc-cccccChHHHHHhhcccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TS---------KLEIHKE-FQELDEHEKIISILKEVG   73 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~---------~~~~~~~-~~d~~~~~~~~~~~~~~d   73 (104)
                      +++++++||||+|++|++++++|.+.|++|.+++|....... ..         ....... ..|..|...+.......+
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~   93 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD   93 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence            345799999999999999999999999999999874432100 00         0000111 127778888888888999


Q ss_pred             EEEEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           74 VVISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        74 ~vv~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      .++|+++...               +.++.+++++|.+.+ +++||
T Consensus        94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i  138 (341)
T d1sb8a_          94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFT  138 (341)
T ss_dssp             EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEE
T ss_pred             ccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEE
Confidence            9999998654               456789999999887 77764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=3.5e-14  Score=90.07  Aligned_cols=91  Identities=21%  Similarity=0.296  Sum_probs=66.7

Q ss_pred             CeE-EEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc--ccc----c-----ccccc-cccccChHHHHHhhcc--c
Q 046878            8 PKI-LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR--TSK----L-----EIHKE-FQELDEHEKIISILKE--V   72 (104)
Q Consensus         8 ~~i-~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~----~-----~~~~~-~~d~~~~~~~~~~~~~--~   72 (104)
                      +|| +||||+||+|++++++|+++|++|++++|.+.....  ...    .     ..... ..|+.|.+.+.+++.+  +
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~   80 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP   80 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence            478 999999999999999999999999999997643210  000    0     00011 1288999999999864  5


Q ss_pred             cEEEEcccCcC---------------hhhHHHHHHHHHHhC
Q 046878           73 GVVISTVAYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        73 d~vv~~a~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      ++++|+++...               +.++.++++++.+.+
T Consensus        81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~  121 (347)
T d1t2aa_          81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG  121 (347)
T ss_dssp             SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT
T ss_pred             ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcC
Confidence            78999988754               235678899998876

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.55  E-value=5e-15  Score=91.87  Aligned_cols=79  Identities=18%  Similarity=0.257  Sum_probs=59.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhcc--ccEEEEcccCcC--
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKE--VGVVISTVAYPQ--   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~d~vv~~a~~~~--   83 (104)
                      |||+||||+|++|+++++.|.+.|+.+ .++++....           ..|+.|.+.+.+.+++  +|+|||+||...  
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~~-----------~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~~~   68 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKEF-----------CGDFSNPKGVAETVRKLRPDVIVNAAAHTAVD   68 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSSS-----------CCCTTCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCccc-----------cCcCCCHHHHHHHHHHcCCCEEEEeccccccc
Confidence            579999999999999999999887644 445443221           1378888889898875  599999998754  


Q ss_pred             -------------hhhHHHHHHHHHHhC
Q 046878           84 -------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~   98 (104)
                                   ...+.++++++.+.+
T Consensus        69 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~   96 (298)
T d1n2sa_          69 KAESEPELAQLLNATSVEAIAKAANETG   96 (298)
T ss_dssp             HHTTCHHHHHHHHTHHHHHHHHHHTTTT
T ss_pred             ccccCccccccccccccccchhhhhccc
Confidence                         334567777777665

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=1.3e-14  Score=86.95  Aligned_cols=90  Identities=12%  Similarity=0.212  Sum_probs=62.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~~   83 (104)
                      ++||+|+||||++|++++++|+++|+  .|..+.|++...  ..+..     .+..|..++.+. ...+|+||+++|...
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--~~~~~-----~~~~d~~~~~~~~~~~~d~vi~~~g~~~   74 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--HPRLD-----NPVGPLAELLPQLDGSIDTAFCCLGTTI   74 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--CTTEE-----CCBSCHHHHGGGCCSCCSEEEECCCCCH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--ccccc-----ccccchhhhhhccccchheeeeeeeeec
Confidence            57999999999999999999999997  466656654322  11111     123343444333 356899999998753


Q ss_pred             -------------hhhHHHHHHHHHHhCCcccCC
Q 046878           84 -------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        84 -------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                                   ...+.++++++++.+ +++|+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i  107 (212)
T d2a35a1          75 KEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYL  107 (212)
T ss_dssp             HHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEE
T ss_pred             cccccccccccchhhhhhhccccccccc-ccccc
Confidence                         345678999999886 88764

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.54  E-value=2.1e-14  Score=86.37  Aligned_cols=74  Identities=11%  Similarity=0.192  Sum_probs=55.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCe--EEEEEcCCCCcccccccccccc-cccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHN--TFVYARPVTENSRTSKLEIHKE-FQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~--v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +++|+|+||+|++|+++++.|+++|++  |+.+.|++.+....  ...... ..|+.+.+.+.++++++|+|||+++..
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~~   79 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSAV   79 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCCC
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--cCCcEEEEeeeccccccccccccceeeEEEEeec
Confidence            469999999999999999999999976  55556665433111  111111 138899999999999999999999864

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.53  E-value=4.4e-14  Score=88.79  Aligned_cols=91  Identities=18%  Similarity=0.189  Sum_probs=67.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc--ccccccccc----cccccChHHHHHhhcc--ccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR--TSKLEIHKE----FQELDEHEKIISILKE--VGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~~~~~~----~~d~~~~~~~~~~~~~--~d~vv~~a   79 (104)
                      ++++||||+||+|+++++.|+++|++|++++|.......  .........    ..|+.|.+.+.+.+..  .++++|++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a   80 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA   80 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence            589999999999999999999999999999987654311  011111111    1288899988888754  57888888


Q ss_pred             cCcC---------------hhhHHHHHHHHHHhC
Q 046878           80 AYPQ---------------LLDQLKIVDAIKVAG   98 (104)
Q Consensus        80 ~~~~---------------~~~~~~l~~~~~~~~   98 (104)
                      +...               ..++.++++++.+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~  114 (321)
T d1rpna_          81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS  114 (321)
T ss_dssp             SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC
T ss_pred             ccccccccccchHHHHhhhhhchHHHHHHHHHhC
Confidence            7654               345678899998887

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.53  E-value=1.3e-14  Score=91.65  Aligned_cols=96  Identities=14%  Similarity=0.263  Sum_probs=66.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeE------EEEEcCCCCcc--cccccc---ccccc-ccccChHHHHHhhccccEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNT------FVYARPVTENS--RTSKLE---IHKEF-QELDEHEKIISILKEVGVV   75 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v------~~~~r~~~~~~--~~~~~~---~~~~~-~d~~~~~~~~~~~~~~d~v   75 (104)
                      |||+||||+|++|+++++.|+++|++|      ..+++......  ......   ....+ .|..+..........+|.|
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v   80 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI   80 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence            589999999999999999999998754      33333211110  011111   11111 2777888888888999999


Q ss_pred             EEcccCcC---------------hhhHHHHHHHHHHhCCcccCC
Q 046878           76 ISTVAYPQ---------------LLDQLKIVDAIKVAGNIKVFV  104 (104)
Q Consensus        76 v~~a~~~~---------------~~~~~~l~~~~~~~~~v~~~i  104 (104)
                      +|+|+...               ...+.++++++.+.+ +++||
T Consensus        81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I  123 (322)
T d1r6da_          81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVV  123 (322)
T ss_dssp             EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEE
T ss_pred             EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEE
Confidence            99998754               346679999999887 77764

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.46  E-value=4.6e-14  Score=83.68  Aligned_cols=81  Identities=15%  Similarity=0.217  Sum_probs=63.5

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----ccccccccccChHHHHHhhccccEEEE
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----EIHKEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~~~~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      ..++.++++||||+|.+|+++++.|.++|.+|.+++|+.++.+... ..    .......|+.+.+++.++++++|++||
T Consensus        19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin   98 (191)
T d1luaa1          19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT   98 (191)
T ss_dssp             SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred             CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence            3567899999999999999999999999999999999976652111 11    111111278899999999999999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|...
T Consensus        99 ~Ag~g~  104 (191)
T d1luaa1          99 AGAIGL  104 (191)
T ss_dssp             CCCTTC
T ss_pred             cCcccc
Confidence            998753

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.45  E-value=1.7e-13  Score=84.42  Aligned_cols=61  Identities=21%  Similarity=0.224  Sum_probs=52.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv~~a~~~~   83 (104)
                      |||+||||+|++|++++++|.++|++|++++|+.               .|+.|.+.+.+.+.  ++|+|||+++...
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------~D~~d~~~~~~~l~~~~~d~vih~a~~~~   64 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEKKPNVVINCAAHTA   64 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------ccCCCHHHHHHHHHHcCCCEEEeeccccc
Confidence            5799999999999999999999999999988764               25778888888886  4699999999865

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.44  E-value=3.6e-13  Score=82.49  Aligned_cols=83  Identities=17%  Similarity=0.168  Sum_probs=63.8

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccc-cccccChHHHHHhh---ccccEE
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKE-FQELDEHEKIISIL---KEVGVV   75 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~-~~d~~~~~~~~~~~---~~~d~v   75 (104)
                      |+..++.++++||||++.||+++++.|+++|++|.+.+|+.++.+.. ........ ..|+.|++++++.+   .++|++
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDil   80 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLL   80 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEE
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEE
Confidence            77778899999999999999999999999999999999987554211 01111111 12888888887775   468999


Q ss_pred             EEcccCcC
Q 046878           76 ISTVAYPQ   83 (104)
Q Consensus        76 v~~a~~~~   83 (104)
                      ||+||...
T Consensus        81 VnnAg~~~   88 (244)
T d1pr9a_          81 VNNAAVAL   88 (244)
T ss_dssp             EECCCCCC
T ss_pred             Eecccccc
Confidence            99999754

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.39  E-value=1.1e-12  Score=80.17  Aligned_cols=79  Identities=9%  Similarity=0.095  Sum_probs=59.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhh-------ccccEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISIL-------KEVGVVI   76 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv   76 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.+..+.. +.........|+.+++++.+++       .++|++|
T Consensus         3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV   82 (242)
T d1ulsa_           3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV   82 (242)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            5778999999999999999999999999999999987554221 1111111123888888777665       3689999


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      |+||...
T Consensus        83 nnAG~~~   89 (242)
T d1ulsa_          83 HYAGITR   89 (242)
T ss_dssp             ECCCCCC
T ss_pred             ECCcccc
Confidence            9999754

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.36  E-value=5.1e-12  Score=77.02  Aligned_cols=75  Identities=16%  Similarity=0.222  Sum_probs=58.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-------ccccEEE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-------KEVGVVI   76 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv   76 (104)
                      +++.++++||||++.||+++++.|+++|++|.+.+|+.+..+.   .  .....|+.|++++.+++       ...|++|
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~---~--~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLV   78 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---L--FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLV   78 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---S--EEEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcC---c--eEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence            3567899999999999999999999999999999998765521   1  11123788877766654       3689999


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      |+||...
T Consensus        79 nnAG~~~   85 (237)
T d1uzma1          79 SNAGLSA   85 (237)
T ss_dssp             EECSCCC
T ss_pred             eeecccc
Confidence            9999754

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.35  E-value=4.2e-12  Score=77.88  Aligned_cols=80  Identities=13%  Similarity=0.147  Sum_probs=59.3

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-------ccccEEE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-------KEVGVVI   76 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-------~~~d~vv   76 (104)
                      .++.++++||||++.||+++++.|+++|++|.+.+|+++..+..+.........|+.+++++.+++       .++|++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            356789999999999999999999999999999999875442211111111113888877766654       3689999


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      |+||...
T Consensus        82 nnAG~~~   88 (248)
T d2d1ya1          82 NNAAIAA   88 (248)
T ss_dssp             ECCCCCC
T ss_pred             EeCcCCC
Confidence            9999754

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.33  E-value=2e-12  Score=79.83  Aligned_cols=83  Identities=16%  Similarity=0.183  Sum_probs=61.6

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-ccc-----cccccccccccChHHHHHhh----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSK-----LEIHKEFQELDEHEKIISIL----   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~-----~~~~~~~~d~~~~~~~~~~~----   69 (104)
                      |...++.++++||||++.||+++++.|+++|++|.+.+|+.+.. +. .+.     .+......|+.+++++.+++    
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            66678889999999999999999999999999999999986432 10 000     01111112888888777665    


Q ss_pred             ---ccccEEEEcccCcC
Q 046878           70 ---KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ---~~~d~vv~~a~~~~   83 (104)
                         .++|++||++|...
T Consensus        81 ~~~G~iDiLVnnAG~~~   97 (261)
T d1geea_          81 KEFGKLDVMINNAGLEN   97 (261)
T ss_dssp             HHHSCCCEEEECCCCCC
T ss_pred             HHhCCCCEeeccceecC
Confidence               36899999999754

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.32  E-value=6.6e-12  Score=76.91  Aligned_cols=80  Identities=8%  Similarity=0.120  Sum_probs=59.2

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc--ccc--ccccccccccChHHHHHhh-------ccc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT--SKL--EIHKEFQELDEHEKIISIL-------KEV   72 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~--~~~--~~~~~~~d~~~~~~~~~~~-------~~~   72 (104)
                      .++.++++||||++.||+++++.|+++|++|.+.+|++.+....  ...  .......|+.|++++.+++       ..+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~i   81 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRC   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            46788999999999999999999999999999999986432110  000  1111112888888777664       368


Q ss_pred             cEEEEcccCcC
Q 046878           73 GVVISTVAYPQ   83 (104)
Q Consensus        73 d~vv~~a~~~~   83 (104)
                      |++||+||...
T Consensus        82 DilVnnAG~~~   92 (247)
T d2ew8a1          82 DILVNNAGIYP   92 (247)
T ss_dssp             CEEEECCCCCC
T ss_pred             CEEEECCCCCC
Confidence            99999999854

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.32  E-value=4.9e-12  Score=77.43  Aligned_cols=81  Identities=16%  Similarity=0.199  Sum_probs=60.5

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-cccccc-ccccChHHHHHhh-------ccc
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIHKEF-QELDEHEKIISIL-------KEV   72 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~~~~-~d~~~~~~~~~~~-------~~~   72 (104)
                      +.++.++++||||++.||+++++.|+++|++|.+.+|++++.+... .. .....+ .|+.|++++.+++       ..+
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4567889999999999999999999999999999999875542111 01 111111 2888888777665       358


Q ss_pred             cEEEEcccCcC
Q 046878           73 GVVISTVAYPQ   83 (104)
Q Consensus        73 d~vv~~a~~~~   83 (104)
                      |++||+||...
T Consensus        82 dilinnAG~~~   92 (244)
T d1nffa_          82 HVLVNNAGILN   92 (244)
T ss_dssp             CEEEECCCCCC
T ss_pred             eEEEECCcccC
Confidence            99999999754

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.31  E-value=2.5e-12  Score=79.24  Aligned_cols=83  Identities=13%  Similarity=0.215  Sum_probs=61.5

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc------ccccccccccChHHHHHhh----
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL------EIHKEFQELDEHEKIISIL----   69 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~------~~~~~~~d~~~~~~~~~~~----   69 (104)
                      |..+.+.|+++||||++.||+++++.|+++|++|.+.+|+.++.... +..      +......|+.+++++.+++    
T Consensus         3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   82 (260)
T d1h5qa_           3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   82 (260)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence            34456778999999999999999999999999999999988665211 000      1111112888888777665    


Q ss_pred             ---ccccEEEEcccCcC
Q 046878           70 ---KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ---~~~d~vv~~a~~~~   83 (104)
                         ..+|++||++|...
T Consensus        83 ~~~g~iDilVnnAg~~~   99 (260)
T d1h5qa_          83 ADLGPISGLIANAGVSV   99 (260)
T ss_dssp             HHSCSEEEEEECCCCCC
T ss_pred             HHhCCCcEecccccccc
Confidence               36899999998753

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=7.2e-12  Score=76.53  Aligned_cols=79  Identities=16%  Similarity=0.167  Sum_probs=59.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccc-cccccChHHHHHhhc---cccEEEEcc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKE-FQELDEHEKIISILK---EVGVVISTV   79 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~-~~d~~~~~~~~~~~~---~~d~vv~~a   79 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.++..... ....... ..|+.|+++++++++   ++|++||+|
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnA   82 (242)
T d1cyda_           3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNA   82 (242)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECC
Confidence            46789999999999999999999999999999999865542111 1111111 128888888887764   689999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      |...
T Consensus        83 g~~~   86 (242)
T d1cyda_          83 ALVI   86 (242)
T ss_dssp             CCCC
T ss_pred             cccc
Confidence            9754

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.29  E-value=7.8e-12  Score=76.90  Aligned_cols=80  Identities=15%  Similarity=0.235  Sum_probs=59.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-ccc-cccccccChHHHHHhh-------cccc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-EIH-KEFQELDEHEKIISIL-------KEVG   73 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-~~~-~~~~d~~~~~~~~~~~-------~~~d   73 (104)
                      .++.++++||||++.||+++++.|+++|++|.+.+|+.++.+... .. ... ....|+.+++++.+++       ..+|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD   81 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCcc
Confidence            467789999999999999999999999999999999875542111 11 011 1112888888777665       3689


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      ++||+||...
T Consensus        82 ilVnnAg~~~   91 (254)
T d1hdca_          82 GLVNNAGIST   91 (254)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEecCcccc
Confidence            9999999754

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.28  E-value=6.8e-12  Score=77.01  Aligned_cols=80  Identities=19%  Similarity=0.261  Sum_probs=59.7

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-c------cccccccccccChHHHHHhh-------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-K------LEIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~------~~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      .++.++++||||++.||+++++.|+++|++|.+.+|+.++..... .      .+......|+.+++++.+++       
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            467889999999999999999999999999999999875542110 0      01111113888888776665       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      .++|++||+||...
T Consensus        82 g~iDiLVnnAG~~~   95 (251)
T d1vl8a_          82 GKLDTVVNAAGINR   95 (251)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEECCCCCC
Confidence            36899999999754

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.28  E-value=1.4e-11  Score=74.89  Aligned_cols=76  Identities=14%  Similarity=0.229  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccC-hHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDE-HEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.+..+... ..  ....|+.+ .+.+.+.+.++|++||+||...
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~-~~--~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~   78 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSG-HR--YVVCDLRKDLDLLFEKVKEVDILVLNAGGPK   78 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTC-SE--EEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcC-Cc--EEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence            56789999999999999999999999999999999865442111 11  11125543 4566777789999999998754

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.3e-11  Score=75.70  Aligned_cols=79  Identities=13%  Similarity=0.221  Sum_probs=58.7

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-ccc-ccccccccChHHHHHhh-------ccccE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEI-HKEFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~-~~~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      .++.++++||||++.||+++++.|+++|++|.+.+|+.+..+.... ... .....|+.|++++.+++       ..+|+
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC   82 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence            4577899999999999999999999999999999998655421111 111 11113888888777665       35899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus        83 lVnnAG~~   90 (250)
T d1ydea1          83 VVNNAGHH   90 (250)
T ss_dssp             EEECCCCC
T ss_pred             EEeccccc
Confidence            99999954

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.27  E-value=7.3e-12  Score=77.03  Aligned_cols=79  Identities=13%  Similarity=0.172  Sum_probs=59.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc--ccccccccccChHHHHHhh-------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL--EIHKEFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~--~~~~~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.+..+.. ...  .......|+.+++++.+++       ..+|+
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi   82 (256)
T d1k2wa_           3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI   82 (256)
T ss_dssp             TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            5678999999999999999999999999999999986554211 111  1111123888988877765       36899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||++|...
T Consensus        83 lVnnAg~~~   91 (256)
T d1k2wa_          83 LVNNAALFD   91 (256)
T ss_dssp             EEECCCCCC
T ss_pred             EEeeccccc
Confidence            999999754

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=7.9e-12  Score=76.95  Aligned_cols=79  Identities=20%  Similarity=0.269  Sum_probs=58.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc------cc-cccccccChHHHHHhh-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE------IH-KEFQELDEHEKIISIL-------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~------~~-~~~~d~~~~~~~~~~~-------   69 (104)
                      ++.++++||||++.||.++++.|+++|++|++.+|+.++.+.. +...      .. ....|+.+++++.+++       
T Consensus         8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~   87 (257)
T d1xg5a_           8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH   87 (257)
T ss_dssp             GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            4568999999999999999999999999999999987554221 0010      11 1112888888777665       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      .++|++||+||...
T Consensus        88 g~iD~lVnnAg~~~  101 (257)
T d1xg5a_          88 SGVDICINNAGLAR  101 (257)
T ss_dssp             CCCSEEEECCCCCC
T ss_pred             CCCCEEEecccccC
Confidence            36899999999754

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.27  E-value=8e-12  Score=76.37  Aligned_cols=79  Identities=15%  Similarity=0.190  Sum_probs=58.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc--ccccccccccChHHHHHhh-------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL--EIHKEFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~--~~~~~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+++..+... ..  .......|+.+++++.+++       ..+|+
T Consensus         2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (243)
T d1q7ba_           2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDI   81 (243)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcce
Confidence            46789999999999999999999999999999999875542111 11  1111113888888776665       36899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||+||...
T Consensus        82 lVnnAg~~~   90 (243)
T d1q7ba_          82 LVNNAGITR   90 (243)
T ss_dssp             EEECCCCCC
T ss_pred             ehhhhhhcc
Confidence            999998754

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.26  E-value=9.3e-12  Score=76.19  Aligned_cols=78  Identities=10%  Similarity=0.172  Sum_probs=55.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccc--ccccc-ccccChHHHHHhhc---------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLE--IHKEF-QELDEHEKIISILK---------   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~--~~~~~-~d~~~~~~~~~~~~---------   70 (104)
                      |++++|+||||++.||.+++++|+++|+  .|++.+|+.++.+......  ....+ .|+.+++++.++++         
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   80 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSD   80 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCC
Confidence            5668999999999999999999999985  5777788876552211111  11111 28888777666542         


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      +.|++||+||..
T Consensus        81 ~idilinnAG~~   92 (250)
T d1yo6a1          81 GLSLLINNAGVL   92 (250)
T ss_dssp             CCCEEEECCCCC
T ss_pred             CeEEEEEcCccc
Confidence            379999999964

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.26  E-value=6.3e-12  Score=77.43  Aligned_cols=79  Identities=9%  Similarity=0.181  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-ccc-cc------cccccccccccChHHHHHhh-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SRT-SK------LEIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~~-~~------~~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|++... +.. ..      ........|+.|++++.+++       
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            5678999999999999999999999999999999975332 110 00      01111113888888777765       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      .+.|++||+||...
T Consensus        82 G~iDiLVnnAG~~~   95 (260)
T d1x1ta1          82 GRIDILVNNAGIQH   95 (260)
T ss_dssp             SCCSEEEECCCCCC
T ss_pred             CCCcEEEeeccccc
Confidence            35899999999754

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.5e-11  Score=75.27  Aligned_cols=81  Identities=15%  Similarity=0.152  Sum_probs=60.9

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhh-------
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      .....+.++||||++.||+++++.|+++|++|.+++|+.++.+... ..     .......|+.|++++.+++       
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            3467789999999999999999999999999999999876542110 00     1111123888888777655       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      .++|++||++|...
T Consensus        83 g~idilinnag~~~   96 (244)
T d1yb1a_          83 GDVSILVNNAGVVY   96 (244)
T ss_dssp             CCCSEEEECCCCCC
T ss_pred             CCCceeEeeccccc
Confidence            36899999999864

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.26  E-value=1.2e-11  Score=75.83  Aligned_cols=81  Identities=12%  Similarity=0.196  Sum_probs=59.8

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----cccccccc-ccccChHHHHHhh-------c
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLEIHKEF-QELDEHEKIISIL-------K   70 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~~~~~~-~d~~~~~~~~~~~-------~   70 (104)
                      +.++.++++||||++.||+++++.|+++|++|.+.+|+.+..+...    .......+ .|+.|++++.+++       .
T Consensus         2 nrL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            3467889999999999999999999999999999999865442110    00111111 2888888776665       3


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      .+|++||+||...
T Consensus        82 ~iDiLVnnAg~~~   94 (251)
T d1zk4a1          82 PVSTLVNNAGIAV   94 (251)
T ss_dssp             SCCEEEECCCCCC
T ss_pred             CceEEEecccccc
Confidence            6899999999854

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.24  E-value=1.5e-11  Score=75.40  Aligned_cols=81  Identities=14%  Similarity=0.209  Sum_probs=59.8

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      +.++.+.++||||++.||+++++.|+++|++|.+.+|+.+..+.. ...     +......|+.+++++.+++       
T Consensus         6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   85 (251)
T d2c07a1           6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH   85 (251)
T ss_dssp             CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            346778999999999999999999999999999999986544211 001     1111112888888777665       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      ...|++||++|...
T Consensus        86 g~iDilvnnag~~~   99 (251)
T d2c07a1          86 KNVDILVNNAGITR   99 (251)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCceeeeecccccc
Confidence            36899999998754

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.22  E-value=2.8e-11  Score=74.53  Aligned_cols=80  Identities=13%  Similarity=0.237  Sum_probs=58.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------c
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~   70 (104)
                      +++.++++||||++.||+++++.|+++|++|.+.+|+.++.+.. ...     .......|+.+++++.+++       .
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH   84 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            46788999999999999999999999999999999986554211 000     1111113888877766654       2


Q ss_pred             -cccEEEEcccCcC
Q 046878           71 -EVGVVISTVAYPQ   83 (104)
Q Consensus        71 -~~d~vv~~a~~~~   83 (104)
                       ..|++||++|...
T Consensus        85 ~~idilvnnAG~~~   98 (259)
T d2ae2a_          85 GKLNILVNNAGIVI   98 (259)
T ss_dssp             TCCCEEEECCCCCC
T ss_pred             CCceEEEECCceec
Confidence             4799999999754

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.22  E-value=2.4e-11  Score=74.76  Aligned_cols=78  Identities=12%  Similarity=0.157  Sum_probs=58.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-c-------cccccccccccChHHHHHhh-------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-K-------LEIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~-------~~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.+..+... .       ........|+.|++++.+++       
T Consensus         2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   81 (258)
T d1iy8a_           2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF   81 (258)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999875542110 0       01111112888888777665       


Q ss_pred             ccccEEEEcccCc
Q 046878           70 KEVGVVISTVAYP   82 (104)
Q Consensus        70 ~~~d~vv~~a~~~   82 (104)
                      ..+|++||+||..
T Consensus        82 G~iDiLVnnAG~~   94 (258)
T d1iy8a_          82 GRIDGFFNNAGIE   94 (258)
T ss_dssp             SCCSEEEECCCCC
T ss_pred             CCCCEEEECCccc
Confidence            4689999999864

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.22  E-value=1.4e-11  Score=75.19  Aligned_cols=80  Identities=11%  Similarity=0.148  Sum_probs=59.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccc--cccccccccChHHHHHhh-------cccc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLE--IHKEFQELDEHEKIISIL-------KEVG   73 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~--~~~~~~d~~~~~~~~~~~-------~~~d   73 (104)
                      .++.++++||||++.||+++++.|+++|++|++.+|+.++.... ....  ......|+.+++++.+.+       .+.|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iD   81 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLH   81 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            35778999999999999999999999999999999987554211 1111  111112888888776654       4689


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      ++||+++...
T Consensus        82 iLinnAg~~~   91 (241)
T d2a4ka1          82 GVAHFAGVAH   91 (241)
T ss_dssp             EEEEGGGGTT
T ss_pred             Eecccccccc
Confidence            9999998754

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=1.8e-11  Score=75.16  Aligned_cols=78  Identities=6%  Similarity=0.132  Sum_probs=58.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-c-------cccccccccccChHHHHHhh-------c
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-K-------LEIHKEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~-------~~~~~~~~d~~~~~~~~~~~-------~   70 (104)
                      ..++++||||++.||+++++.|+++|++|.+++|+.++.+... .       ........|+.+++++++++       .
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            4578999999999999999999999999999999865432110 0       01111112888888777765       3


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ++|++||+||...
T Consensus        82 ~iDilVnnAg~~~   94 (254)
T d2gdza1          82 RLDILVNNAGVNN   94 (254)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CcCeecccccccc
Confidence            6899999999876

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.21  E-value=3.4e-11  Score=74.13  Aligned_cols=78  Identities=12%  Similarity=0.186  Sum_probs=58.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc-----ccccccccccChHHHHHhh-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL-----EIHKEFQELDEHEKIISIL-------KE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~-----~~~~~~~d~~~~~~~~~~~-------~~   71 (104)
                      ++.++++||||++.||+++++.|+++|+.|.+++|+.+..+... ..     +......|+.+++++.+++       ..
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (260)
T d1zema1           3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK   82 (260)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            56789999999999999999999999999999999865542110 00     1111123888888777665       36


Q ss_pred             ccEEEEcccCc
Q 046878           72 VGVVISTVAYP   82 (104)
Q Consensus        72 ~d~vv~~a~~~   82 (104)
                      +|++||++|..
T Consensus        83 iDilVnnaG~~   93 (260)
T d1zema1          83 IDFLFNNAGYQ   93 (260)
T ss_dssp             CCEEEECCCCC
T ss_pred             CCeehhhhccc
Confidence            89999999864

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.21  E-value=3.6e-11  Score=74.00  Aligned_cols=81  Identities=11%  Similarity=0.117  Sum_probs=59.3

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-cc----ccc-cccccccChHHHHHhhc------
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KL----EIH-KEFQELDEHEKIISILK------   70 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~----~~~-~~~~d~~~~~~~~~~~~------   70 (104)
                      ++++.|+++||||++.||+++++.|+++|++|.+.+|++++.+... ..    ... ....|+.+++++.+++.      
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            3567899999999999999999999999999999999875542110 00    011 11138888887666542      


Q ss_pred             --cccEEEEcccCcC
Q 046878           71 --EVGVVISTVAYPQ   83 (104)
Q Consensus        71 --~~d~vv~~a~~~~   83 (104)
                        ..|+++|++|...
T Consensus        82 ~g~idilinnag~~~   96 (258)
T d1ae1a_          82 DGKLNILVNNAGVVI   96 (258)
T ss_dssp             TSCCCEEEECCCCCC
T ss_pred             CCCcEEEeccccccc
Confidence              3799999999754

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.21  E-value=2.5e-11  Score=74.55  Aligned_cols=81  Identities=11%  Similarity=0.115  Sum_probs=58.9

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccc--cccccccccChHHHHHhh-------ccc
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLE--IHKEFQELDEHEKIISIL-------KEV   72 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~--~~~~~~d~~~~~~~~~~~-------~~~   72 (104)
                      +.++.++++||||++.||+++++.|+++|++|.+.+|+.+..+... ...  ......|+.+++++.+++       ...
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            3567889999999999999999999999999999999865442111 110  111112777777666654       468


Q ss_pred             cEEEEcccCcC
Q 046878           73 GVVISTVAYPQ   83 (104)
Q Consensus        73 d~vv~~a~~~~   83 (104)
                      |++||++|...
T Consensus        82 DilVnnAG~~~   92 (253)
T d1hxha_          82 NVLVNNAGILL   92 (253)
T ss_dssp             CEEEECCCCCC
T ss_pred             CeEEecccccC
Confidence            99999999754

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.21  E-value=1.6e-11  Score=75.88  Aligned_cols=80  Identities=13%  Similarity=0.219  Sum_probs=59.4

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc----ccccccccc-ccccChHHHHHhh-------c
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----SKLEIHKEF-QELDEHEKIISIL-------K   70 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~----~~~~~~~~~-~d~~~~~~~~~~~-------~   70 (104)
                      ..++.++++||||++.||+++++.|+++|++|.+++|+.+..+..    ........+ .|+.+++++.+++       .
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHG   81 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            356788999999999999999999999999999999986554211    011111111 2888888777765       3


Q ss_pred             cccEEEEcccCc
Q 046878           71 EVGVVISTVAYP   82 (104)
Q Consensus        71 ~~d~vv~~a~~~   82 (104)
                      .+|++||++|..
T Consensus        82 ~iD~lVnnAG~~   93 (268)
T d2bgka1          82 KLDIMFGNVGVL   93 (268)
T ss_dssp             CCCEEEECCCCC
T ss_pred             Ccceeccccccc
Confidence            689999999863

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.21  E-value=1.9e-11  Score=75.28  Aligned_cols=81  Identities=15%  Similarity=0.182  Sum_probs=58.2

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-c-----cccccccccccChHHHHHhh-------
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-K-----LEIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~-----~~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      ++++.++++||||++.||+++++.|+++|++|.+++|+.++.+... .     ........|+.+++++.+++       
T Consensus         4 F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d1xq1a_           4 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   83 (259)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHh
Confidence            3578899999999999999999999999999999999875542110 0     01111112888877665554       


Q ss_pred             -ccccEEEEcccCcC
Q 046878           70 -KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 -~~~d~vv~~a~~~~   83 (104)
                       ...|++||++|...
T Consensus        84 ~g~idilvnnAG~~~   98 (259)
T d1xq1a_          84 GGKLDILINNLGAIR   98 (259)
T ss_dssp             TTCCSEEEEECCC--
T ss_pred             CCCcccccccccccC
Confidence             24799999999754

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.20  E-value=4.6e-11  Score=73.38  Aligned_cols=79  Identities=16%  Similarity=0.216  Sum_probs=55.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-------cccccccccc-ChHHHHHh-------h
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-------EIHKEFQELD-EHEKIISI-------L   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-------~~~~~~~d~~-~~~~~~~~-------~   69 (104)
                      ++.++++||||++.||.+++++|+++|.+|+++.|+.++.......       .......|+. +.++++++       +
T Consensus         3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~   82 (254)
T d1sbya1           3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL   82 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence            5778999999999999999999999999999988887654211110       0111111554 43444443       3


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      .++|++||+||...
T Consensus        83 g~iDilvnnAG~~~   96 (254)
T d1sbya1          83 KTVDILINGAGILD   96 (254)
T ss_dssp             SCCCEEEECCCCCC
T ss_pred             CCCCEEEeCCCCCC
Confidence            57899999999876

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.19  E-value=1.5e-11  Score=76.34  Aligned_cols=78  Identities=15%  Similarity=0.176  Sum_probs=58.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc---cccccccccccChHHHHHhh-------ccccE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK---LEIHKEFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ++.++++||||++.||+++++.|+++|++|.+++|++++.+....   ........|+.+++++.+++       ..+|+
T Consensus         3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idi   82 (276)
T d1bdba_           3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDT   82 (276)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCccc
Confidence            577899999999999999999999999999999998755421111   11111123888877776654       36899


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +||+||..
T Consensus        83 lvnnAG~~   90 (276)
T d1bdba_          83 LIPNAGIW   90 (276)
T ss_dssp             EECCCCCC
T ss_pred             cccccccc
Confidence            99999863

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.19  E-value=2.7e-11  Score=74.43  Aligned_cols=79  Identities=9%  Similarity=0.136  Sum_probs=58.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------cc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~   71 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.++.+.. +..     .......|+.+++++.+++       ..
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999999999986544211 001     1111113888888776654       46


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|++||++|...
T Consensus        89 iDilvnnAG~~~  100 (255)
T d1fmca_          89 VDILVNNAGGGG  100 (255)
T ss_dssp             CCEEEECCCCCC
T ss_pred             CCEeeeCCcCCC
Confidence            899999999754

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=1e-10  Score=71.38  Aligned_cols=79  Identities=10%  Similarity=0.161  Sum_probs=57.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc-cccccccccChHHHHHh---hccccEEEEccc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE-IHKEFQELDEHEKIISI---LKEVGVVISTVA   80 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~---~~~~d~vv~~a~   80 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|++++.+...+.. ......|+.+.+.++..   +...|++||++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            67789999999999999999999999999999999876553222111 11112266555544443   457899999999


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      ...
T Consensus        84 ~~~   86 (245)
T d2ag5a1          84 FVH   86 (245)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            765

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.19  E-value=1.5e-11  Score=75.42  Aligned_cols=81  Identities=14%  Similarity=0.177  Sum_probs=57.2

Q ss_pred             CCCCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhh-----
Q 046878            2 EGENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISIL-----   69 (104)
Q Consensus         2 ~~~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~-----   69 (104)
                      ...++.++++||||+|  .||+++++.|+++|++|.+.+|++...+.....     .......|+.+++++.+++     
T Consensus         3 ~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (256)
T d1ulua_           3 TVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (256)
T ss_dssp             EECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHH
Confidence            3457888999999987  699999999999999998888875432111110     0111112788877776654     


Q ss_pred             --ccccEEEEcccCc
Q 046878           70 --KEVGVVISTVAYP   82 (104)
Q Consensus        70 --~~~d~vv~~a~~~   82 (104)
                        .+.|++||++|..
T Consensus        83 ~~g~iDilVnnag~~   97 (256)
T d1ulua_          83 AFGGLDYLVHAIAFA   97 (256)
T ss_dssp             HHSSEEEEEECCCCC
T ss_pred             hcCCceEEEeccccc
Confidence              3689999999864

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.19  E-value=4.2e-11  Score=73.53  Aligned_cols=76  Identities=11%  Similarity=0.168  Sum_probs=55.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------ccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      |.++||||++.||+++++.|+++|++|.+.+|++++.+.. +..     +......|+.+++++.+++       .++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            3469999999999999999999999999999987554211 000     1111113888888777665       36899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||+||...
T Consensus        82 lVnnAG~~~   90 (255)
T d1gega_          82 IVNNAGVAP   90 (255)
T ss_dssp             EEECCCCCC
T ss_pred             EEecccccc
Confidence            999999754

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.18  E-value=8.2e-11  Score=73.72  Aligned_cols=80  Identities=13%  Similarity=0.191  Sum_probs=59.3

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc----------cccccccccccChHHHHHhh---
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK----------LEIHKEFQELDEHEKIISIL---   69 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~----------~~~~~~~~d~~~~~~~~~~~---   69 (104)
                      .++.++++||||++.||+++++.|+++|++|.+.+|+.++.+.. +.          ........|+.+++++.+++   
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            36778999999999999999999999999999999986544211 00          01111113888888777665   


Q ss_pred             ----ccccEEEEcccCcC
Q 046878           70 ----KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ----~~~d~vv~~a~~~~   83 (104)
                          ...|++||++|...
T Consensus        89 ~~~~G~iDiLVnnAg~~~  106 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQF  106 (297)
T ss_dssp             HHHHSCCCEEEECCCCCC
T ss_pred             HHHhCCeEEEEeeccccc
Confidence                36899999998754

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.17  E-value=2.4e-11  Score=75.13  Aligned_cols=90  Identities=16%  Similarity=0.244  Sum_probs=56.0

Q ss_pred             EEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHH------hhccccEEEEcccCc
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIIS------ILKEVGVVISTVAYP   82 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~------~~~~~d~vv~~a~~~   82 (104)
                      |+||||+||+|++++++|+++|+ +|+++++-..........+ . ...++.+.+.+.+      .+..+++|+|+++..
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~   79 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD-L-NIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACS   79 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT-S-CCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc-c-chhhhccchHHHHHHhhhhcccchhhhhhhcccc
Confidence            89999999999999999999995 7888864332221111111 1 1123333332222      235689999999764


Q ss_pred             C-------------hhhHHHHHHHHHHhCCccc
Q 046878           83 Q-------------LLDQLKIVDAIKVAGNIKV  102 (104)
Q Consensus        83 ~-------------~~~~~~l~~~~~~~~~v~~  102 (104)
                      .             ...+.++++++...+ ++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~~  111 (307)
T d1eq2a_          80 STTEWDGKYMMDNNYQYSKELLHYCLERE-IPF  111 (307)
T ss_dssp             CTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CCE
T ss_pred             ccccccccccccccccccccccccccccc-ccc
Confidence            3             345567777777775 543

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.17  E-value=4.3e-11  Score=73.53  Aligned_cols=76  Identities=21%  Similarity=0.261  Sum_probs=56.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------ccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      |..+||||++.||+++++.|+++|++|.+.+|+.+..+.. +..     +......|+.+++++.+++       .++|+
T Consensus         3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi   82 (257)
T d2rhca1           3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV   82 (257)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence            5679999999999999999999999999999986554211 000     1111112888888777765       35899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||+||...
T Consensus        83 lVnnAG~~~   91 (257)
T d2rhca1          83 LVNNAGRPG   91 (257)
T ss_dssp             EEECCCCCC
T ss_pred             EEecccccC
Confidence            999999754

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.17  E-value=1.9e-11  Score=75.72  Aligned_cols=78  Identities=13%  Similarity=0.222  Sum_probs=58.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc----ccc-----ccccccccccChHHHHHhh------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----SKL-----EIHKEFQELDEHEKIISIL------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~----~~~-----~~~~~~~d~~~~~~~~~~~------   69 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.++.+..    ...     .......|+.+++++.+++      
T Consensus         3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~   82 (272)
T d1xkqa_           3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ   82 (272)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999987554211    010     0111122888888777665      


Q ss_pred             -ccccEEEEcccCc
Q 046878           70 -KEVGVVISTVAYP   82 (104)
Q Consensus        70 -~~~d~vv~~a~~~   82 (104)
                       .++|++||++|..
T Consensus        83 ~g~iDilvnnAG~~   96 (272)
T d1xkqa_          83 FGKIDVLVNNAGAA   96 (272)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             hCCceEEEeCCccc
Confidence             3689999999874

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.16  E-value=2.6e-11  Score=75.64  Aligned_cols=80  Identities=19%  Similarity=0.172  Sum_probs=58.7

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cc------cccccccccccChHHHHHhh-------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SK------LEIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~------~~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      ..+.++++||||+|.||+++++.|+++|++|++++|+.++.+.. ..      ........|+.+++++.+.+       
T Consensus        22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~  101 (294)
T d1w6ua_          22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA  101 (294)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhc
Confidence            34568999999999999999999999999999999987554211 00      01111113888888776654       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      .++|+++|++|...
T Consensus       102 g~iDilvnnAg~~~  115 (294)
T d1w6ua_         102 GHPNIVINNAAGNF  115 (294)
T ss_dssp             CSCSEEEECCCCCC
T ss_pred             cccchhhhhhhhcc
Confidence            46899999999754

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.15  E-value=6.7e-11  Score=73.31  Aligned_cols=78  Identities=13%  Similarity=0.202  Sum_probs=57.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----cc-----ccccccccccChHHHHHhh------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KL-----EIHKEFQELDEHEKIISIL------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~-----~~~~~~~d~~~~~~~~~~~------   69 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.++.+...    ..     .......|+.+++++.+++      
T Consensus         2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (274)
T d1xhla_           2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK   81 (274)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999865542110    00     0111123888888777665      


Q ss_pred             -ccccEEEEcccCc
Q 046878           70 -KEVGVVISTVAYP   82 (104)
Q Consensus        70 -~~~d~vv~~a~~~   82 (104)
                       ..+|++||++|..
T Consensus        82 ~G~iDilVnnAG~~   95 (274)
T d1xhla_          82 FGKIDILVNNAGAN   95 (274)
T ss_dssp             HSCCCEEEECCCCC
T ss_pred             cCCceEEEeecccc
Confidence             3579999999864

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.14  E-value=5e-11  Score=72.82  Aligned_cols=76  Identities=18%  Similarity=0.224  Sum_probs=53.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHh---CCCeEEEEEcCCCCccccccc----cccccc-ccccChHHHHHhh---------
Q 046878            7 KPKILIFGGTGYLGKYMVKASVS---SGHNTFVYARPVTENSRTSKL----EIHKEF-QELDEHEKIISIL---------   69 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~---~~~~v~~~~r~~~~~~~~~~~----~~~~~~-~d~~~~~~~~~~~---------   69 (104)
                      |++|+||||++.||+++++.|++   .|+.|++.+|+.++.+.....    .....+ .|+.|++++.+++         
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            56899999999999999999974   688999999998765321110    111111 2777777665543         


Q ss_pred             ccccEEEEcccCc
Q 046878           70 KEVGVVISTVAYP   82 (104)
Q Consensus        70 ~~~d~vv~~a~~~   82 (104)
                      ..+|++||+||..
T Consensus        82 ~~iDiLvnNAg~~   94 (248)
T d1snya_          82 QGLNVLFNNAGIA   94 (248)
T ss_dssp             GCCSEEEECCCCC
T ss_pred             CCcceEEeecccc
Confidence            2479999999864

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.13  E-value=1.6e-10  Score=72.53  Aligned_cols=79  Identities=18%  Similarity=0.121  Sum_probs=53.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc---cccc---------cccccccccChHHHHHh----
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT---SKLE---------IHKEFQELDEHEKIISI----   68 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~---~~~~---------~~~~~~d~~~~~~~~~~----   68 (104)
                      ++.++++||||++.||+++++.|+++|+.|.+.+++.......   ...+         ......|+.+.++.++.    
T Consensus         5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~   84 (302)
T d1gz6a_           5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA   84 (302)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence            4678999999999999999999999999999998875432110   0000         00111144444433332    


Q ss_pred             ---hccccEEEEcccCcC
Q 046878           69 ---LKEVGVVISTVAYPQ   83 (104)
Q Consensus        69 ---~~~~d~vv~~a~~~~   83 (104)
                         +.++|++||+||...
T Consensus        85 ~~~~G~iDiLVnNAGi~~  102 (302)
T d1gz6a_          85 LDTFGRIDVVVNNAGILR  102 (302)
T ss_dssp             HHHTSCCCEEEECCCCCC
T ss_pred             HHHcCCCCEEEECCccCC
Confidence               347899999999754

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.12  E-value=6.5e-11  Score=72.97  Aligned_cols=78  Identities=10%  Similarity=0.168  Sum_probs=56.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-c---c-----ccccccccccChHHHHHhh------
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-K---L-----EIHKEFQELDEHEKIISIL------   69 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~---~-----~~~~~~~d~~~~~~~~~~~------   69 (104)
                      ++.|.++||||++.||+++++.|+++|++|.+.+|+.+..+... .   .     .......|+.+++++.+++      
T Consensus         3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (264)
T d1spxa_           3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   82 (264)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999999999865542110 0   0     0111112888888777665      


Q ss_pred             -ccccEEEEcccCc
Q 046878           70 -KEVGVVISTVAYP   82 (104)
Q Consensus        70 -~~~d~vv~~a~~~   82 (104)
                       .++|++||++|..
T Consensus        83 ~g~iDilvnnAG~~   96 (264)
T d1spxa_          83 FGKLDILVNNAGAA   96 (264)
T ss_dssp             HSCCCEEEECCC--
T ss_pred             hCCCCEeecccccc
Confidence             3689999999864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.11  E-value=1.2e-10  Score=71.60  Aligned_cols=80  Identities=9%  Similarity=0.094  Sum_probs=57.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-ccc-----cccccccccccChHHHHHhh-------
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSK-----LEIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~-----~~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      ++..++++||||++.||.++++.|+++|++|++..++..+. +. ...     ........|+.+++++.+.+       
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            35678999999999999999999999999998877665432 11 000     01111113888888777765       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      ...|++||++|...
T Consensus        83 g~idilinnag~~~   96 (259)
T d1ja9a_          83 GGLDFVMSNSGMEV   96 (259)
T ss_dssp             SCEEEEECCCCCCC
T ss_pred             CCCcEEEecccccc
Confidence            36899999999764

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.11  E-value=1.6e-10  Score=71.43  Aligned_cols=79  Identities=15%  Similarity=0.129  Sum_probs=57.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc-cc-ccc-----cccccccccccChHHHHHhh-------c
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN-SR-TSK-----LEIHKEFQELDEHEKIISIL-------K   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~-~~-~~~-----~~~~~~~~d~~~~~~~~~~~-------~   70 (104)
                      ++.++++||||++.||+++++.|+++|++|.+.+|+.++. +. ...     ........|+.+++++.+.+       .
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            6678999999999999999999999999999998875432 10 000     11111112888887776665       3


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ..|+++|+++...
T Consensus        96 ~idilV~nag~~~  108 (272)
T d1g0oa_          96 KLDIVCSNSGVVS  108 (272)
T ss_dssp             CCCEEEECCCCCC
T ss_pred             CCCccccccccch
Confidence            5799999998764

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.06  E-value=2e-10  Score=69.91  Aligned_cols=76  Identities=8%  Similarity=0.149  Sum_probs=54.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCe-------EEEEEcCCCCcccccc------cccccccccccChHHHHHhh-----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHN-------TFVYARPVTENSRTSK------LEIHKEFQELDEHEKIISIL-----   69 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~-------v~~~~r~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~-----   69 (104)
                      +.++||||++.||+++++.|+++|++       |.+.+|+.+..+....      ........|+.|++++.+++     
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35799999999999999999999986       7888887655421100      01111112888888776665     


Q ss_pred             --ccccEEEEcccCcC
Q 046878           70 --KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 --~~~d~vv~~a~~~~   83 (104)
                        .++|++||++|...
T Consensus        82 ~~g~iDilvnnAg~~~   97 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGR   97 (240)
T ss_dssp             HTSCCSEEEECCCCCC
T ss_pred             HcCCcceeeccccccc
Confidence              36899999999754

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.03  E-value=3.5e-10  Score=68.97  Aligned_cols=76  Identities=11%  Similarity=0.232  Sum_probs=53.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC-cccc-ccc-----ccccccccccChHHHHHhh-------cccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE-NSRT-SKL-----EIHKEFQELDEHEKIISIL-------KEVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~-~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~~d   73 (104)
                      +.++||||++.||+++++.|+++|++|.+.+++.+. .+.. +..     +......|+.+++++.+++       .+.|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            368999999999999999999999999887655432 2110 000     1111112888888776665       3689


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      ++||+||...
T Consensus        82 iLVnnAg~~~   91 (244)
T d1edoa_          82 VVVNNAGITR   91 (244)
T ss_dssp             EEEECCCCCC
T ss_pred             cccccccccc
Confidence            9999999754

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.02  E-value=3.8e-10  Score=68.29  Aligned_cols=73  Identities=16%  Similarity=0.273  Sum_probs=47.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccC----hHHHHHhh--ccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDE----HEKIISIL--KEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~--~~~d~vv~~a~~   81 (104)
                      .||+||||++.||+++++.|.++|++|++++|+........ ........+..+    .+.+...+  ...|++||+||.
T Consensus         3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~   81 (235)
T d1ooea_           3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSN-ILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGG   81 (235)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEE-EECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccccc-ceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcc
Confidence            37999999999999999999999999999999875441111 111111111111    11222222  458999999986

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.02  E-value=6.1e-10  Score=67.49  Aligned_cols=74  Identities=16%  Similarity=0.210  Sum_probs=48.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHH----HHhhc--cccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKI----ISILK--EVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~----~~~~~--~~d~vv~~a~   80 (104)
                      .|+++||||+|.||+++++.|.++|++|.+++++.............. ..+..+.+.+    .+.+.  ++|++||+||
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG   80 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMT-DSFTEQADQVTAEVGKLLGDQKVDAILCVAG   80 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEEECCCC-SCHHHHHHHHHHHHHHHHTTCCEEEEEECCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccceeecc-cCcHHHHHHHHHHHHHHhCCCCceEEEECCc
Confidence            579999999999999999999999999999988765431111111111 0111112222    22222  4899999998


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus        81 ~   81 (236)
T d1dhra_          81 G   81 (236)
T ss_dssp             C
T ss_pred             c
Confidence            5

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.00  E-value=7e-10  Score=68.27  Aligned_cols=80  Identities=13%  Similarity=0.103  Sum_probs=55.5

Q ss_pred             CCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-----ccccccccccChHHHHHhh-------
Q 046878            4 ENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-----EIHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~~~-------   69 (104)
                      .++.++++||||+|  .||.++++.|+++|++|.+++|++...+.....     .......|+.+++++.+++       
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   81 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL   81 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence            46788999999877  699999999999999999999985432111100     0011112666666555544       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      ..+|++++++|...
T Consensus        82 g~id~lV~nag~~~   95 (274)
T d2pd4a1          82 GSLDFIVHSVAFAP   95 (274)
T ss_dssp             SCEEEEEECCCCCC
T ss_pred             CCCCeEEeeccccc
Confidence            46899999999754

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.98  E-value=8.6e-10  Score=67.46  Aligned_cols=76  Identities=16%  Similarity=0.279  Sum_probs=54.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc-ccc-------cc-ccccccChHHHHHhhc------c
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK-LEI-------HK-EFQELDEHEKIISILK------E   71 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~-~~~-------~~-~~~d~~~~~~~~~~~~------~   71 (104)
                      .+++||||+|.||+++++.|.++|+ .|.+++|+....+.... ...       .. ...|+.|++++.+++.      +
T Consensus        10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~   89 (259)
T d2fr1a1          10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP   89 (259)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence            4899999999999999999999998 58888887433321111 010       11 1128889888877764      4


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      .|.|||++|...
T Consensus        90 i~~vv~~ag~~~  101 (259)
T d2fr1a1          90 LSAVFHAAATLD  101 (259)
T ss_dssp             EEEEEECCCCCC
T ss_pred             cccccccccccc
Confidence            789999999764

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.95  E-value=1.5e-09  Score=60.26  Aligned_cols=74  Identities=16%  Similarity=0.275  Sum_probs=57.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      ++++|+|+ |.+|+.+++.|.+.|++|++++.+++..+............|..+++.+.++ +.++|.++.+.+..
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~   75 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   75 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCCcceeeecccchhhhccCCccccEEEEEcCch
Confidence            47899997 9999999999999999999999987665332222222223488888988887 88999988888754

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.95  E-value=1.8e-09  Score=60.03  Aligned_cols=74  Identities=14%  Similarity=0.174  Sum_probs=56.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccccccChHHHHHh-hccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      |+|+|+|+ |.+|+.+++.|.+.|++|.+++.+++..+... .........|..+++.+.++ +.++|.++.+....
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d   76 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE   76 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcH
Confidence            58999997 99999999999999999999999886553221 11111122388899999888 68899888876653

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.95  E-value=4.4e-10  Score=68.77  Aligned_cols=74  Identities=9%  Similarity=0.060  Sum_probs=49.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHH-------HHhhccccEEEEcccC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKI-------ISILKEVGVVISTVAY   81 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~-------~~~~~~~d~vv~~a~~   81 (104)
                      +.+||||++.+|+++++.|.++|++|.+.+|+.+..+............|+.+++++       .+.+.+.|++||++|.
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~   81 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIF   81 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcC
Confidence            689999999999999999999999999999887654322111100001133333322       2334578999999985


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus        82 ~   82 (252)
T d1zmta1          82 A   82 (252)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=98.92  E-value=5.2e-09  Score=63.62  Aligned_cols=66  Identities=17%  Similarity=0.079  Sum_probs=47.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHH--------hhccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIIS--------ILKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~--------~~~~~d~vv~~   78 (104)
                      |+.++||||++.||+++++.|+++|++|.+++|+..+..           .|+.+.+....        .....|+++++
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~-----------~d~~~~~~~~~~~~~~~~~~~~~id~lv~~   69 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------ADLSTAEGRKQAIADVLAKCSKGMDGLVLC   69 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------CCTTSHHHHHHHHHHHHTTCTTCCSEEEEC
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHH-----------HHhcCHHHHHHHHHHHHHHhCCCCcEEEEc
Confidence            467899999999999999999999999999998764330           12222222111        12358999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      ++...
T Consensus        70 Ag~~~   74 (257)
T d1fjha_          70 AGLGP   74 (257)
T ss_dssp             CCCCT
T ss_pred             CCCCC
Confidence            98654

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.92  E-value=5.3e-09  Score=59.14  Aligned_cols=71  Identities=11%  Similarity=0.168  Sum_probs=41.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-C---eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-H---NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      |++|.|+||||++|+.+++.|+++. +   +++.+.++.................+..+.    ..++++|++|.+++.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~----~~~~~~DivF~a~~~   75 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDL----EALKALDIIVTCQGG   75 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCH----HHHHTCSEEEECSCH
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccch----hhhhcCcEEEEecCc
Confidence            3589999999999999999888763 2   456555554333111111111111122222    235678888888864

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=98.91  E-value=1.6e-09  Score=61.91  Aligned_cols=76  Identities=18%  Similarity=0.190  Sum_probs=50.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      |||+|+|+ |.+|..++..|.+.|++|.++.|++...................-.....+.+.++|+||.+......
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iii~vka~~~   76 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFLATSDLLLVTLKAWQV   76 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHHHTCSEEEECSCGGGH
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccchhhhhcccceEEEeecccch
Confidence            58999997 99999999999999999999999886653221111100000000001113445689999999987654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=7e-10  Score=68.39  Aligned_cols=79  Identities=13%  Similarity=0.128  Sum_probs=55.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-------cccccccccccChHHHHHh-------hc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-------LEIHKEFQELDEHEKIISI-------LK   70 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~-------~~   70 (104)
                      ++.++++||||++.||+++++.|+++|++|.+++|+.+..+....       ........|..+.+.....       ..
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            577899999999999999999999999999999998765422110       0001111255554444333       34


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ..|++++++|...
T Consensus        92 ~~~~li~nag~~~  104 (269)
T d1xu9a_          92 GLDMLILNHITNT  104 (269)
T ss_dssp             SCSEEEECCCCCC
T ss_pred             Ccccccccccccc
Confidence            6799999998754

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=5.4e-10  Score=69.06  Aligned_cols=75  Identities=17%  Similarity=0.245  Sum_probs=53.8

Q ss_pred             eEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccc-ccc-----ccccccccccChHHHHHhh-------ccccE
Q 046878            9 KILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRT-SKL-----EIHKEFQELDEHEKIISIL-------KEVGV   74 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~-~~~-----~~~~~~~d~~~~~~~~~~~-------~~~d~   74 (104)
                      ..+||||++.||.++++.|+++ |..|++.+|+.++.+.. +..     .......|+.+.+++.+++       ..+|+
T Consensus         5 VAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDi   84 (275)
T d1wmaa1           5 VALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDV   84 (275)
T ss_dssp             EEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             EEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEE
Confidence            4489999999999999999975 88999999987654211 111     1111112888888776654       36899


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      +||+||...
T Consensus        85 LVnNAGi~~   93 (275)
T d1wmaa1          85 LVNNAGIAF   93 (275)
T ss_dssp             EEECCCCCC
T ss_pred             EEEcCCcCC
Confidence            999999754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.90  E-value=4.8e-09  Score=60.37  Aligned_cols=75  Identities=15%  Similarity=0.314  Sum_probs=54.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccc-cccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKE-FQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .++|+|+|| |.+|+.+++.|.++|++|++++|+.++.... ........ ..+..+.......+...|.++.+.+..
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~   78 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYT   78 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccch
Confidence            368999997 9999999999999999999999998665321 11111111 124455666677788889888877653

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=98.88  E-value=2.5e-09  Score=65.43  Aligned_cols=80  Identities=13%  Similarity=0.151  Sum_probs=53.4

Q ss_pred             CCCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccc--ccccc--cccccccccChHHHHHhh-------
Q 046878            3 GENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSR--TSKLE--IHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~--~~~~~--~~~~~~d~~~~~~~~~~~-------   69 (104)
                      ..|+.++++||||+|  .||.++++.|.++|++|.+.+|+..+...  .+...  ......|+.++++..+++       
T Consensus         2 ~~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           2 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             CTTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcc
Confidence            457789999999755  49999999999999999999887654311  01111  011112666655444332       


Q ss_pred             ---ccccEEEEcccCc
Q 046878           70 ---KEVGVVISTVAYP   82 (104)
Q Consensus        70 ---~~~d~vv~~a~~~   82 (104)
                         ...|+++|++|..
T Consensus        82 ~~~~~ld~~i~~ag~~   97 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFM   97 (268)
T ss_dssp             CTTCCEEEEEECCCCC
T ss_pred             ccCCCcceeeeccccc
Confidence               2469999999864

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=98.84  E-value=3.8e-10  Score=66.50  Aligned_cols=79  Identities=10%  Similarity=0.114  Sum_probs=54.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc----cccccccc---ccccChHHHHHhhccccEEE
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS----KLEIHKEF---QELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~----~~~~~~~~---~d~~~~~~~~~~~~~~d~vv   76 (104)
                      .|.|+||.|+|+ |.+|++++..|.++|++|.++.|+++..+...    +....+.+   .++.-..++.++++++|+||
T Consensus         4 ~~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~ii   82 (189)
T d1n1ea2           4 LLYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIIL   82 (189)
T ss_dssp             CCCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEE
T ss_pred             cceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEE
Confidence            456678999997 99999999999999999999998764432111    01111111   12333345788899999999


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      .+.+...
T Consensus        83 iavPs~~   89 (189)
T d1n1ea2          83 FVIPTQF   89 (189)
T ss_dssp             ECSCHHH
T ss_pred             EcCcHHH
Confidence            9887654

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=98.84  E-value=1.9e-08  Score=56.82  Aligned_cols=84  Identities=15%  Similarity=0.197  Sum_probs=48.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-C---eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-H---NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      |||.|+||||++|+.+++.|+++. +   ++..++.+....+.+..........+..+    .+.+.++|+||.|++...
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~~~~~~~~~~~~~~~----~~~~~~~DvvF~alp~~~   76 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDAGMLHDAFD----IESLKQLDAVITCQGGSY   76 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCCCSSSCCCBCEETTC----HHHHTTCSEEEECSCHHH
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccccccCCcceeeecccc----hhhhccccEEEEecCchH
Confidence            579999999999999999888653 3   35544444332211111111111112222    233578999999987543


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                         ...+...+.+.+
T Consensus        77 ---s~~~~~~l~~~g   88 (147)
T d1mb4a1          77 ---TEKVYPALRQAG   88 (147)
T ss_dssp             ---HHHHHHHHHHTT
T ss_pred             ---HHHHhHHHHHcC
Confidence               345555555554

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=98.81  E-value=7.5e-09  Score=63.06  Aligned_cols=80  Identities=10%  Similarity=0.087  Sum_probs=53.7

Q ss_pred             CCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-c----cccccccccChHHHHHhh-------
Q 046878            4 ENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-E----IHKEFQELDEHEKIISIL-------   69 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~----~~~~~~d~~~~~~~~~~~-------   69 (104)
                      .++.++++||||+|  .+|+++++.|+++|++|.+.+|+++........ .    ......+..+..+..+.+       
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW   81 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcc
Confidence            36778999999988  689999999999999999999986543211110 0    011112555544444433       


Q ss_pred             ccccEEEEcccCcC
Q 046878           70 KEVGVVISTVAYPQ   83 (104)
Q Consensus        70 ~~~d~vv~~a~~~~   83 (104)
                      ...|+++|+++...
T Consensus        82 ~~~d~~v~~a~~~~   95 (258)
T d1qsga_          82 PKFDGFVHSIGFAP   95 (258)
T ss_dssp             SSEEEEEECCCCCC
T ss_pred             cccceEEEeecccc
Confidence            35799999997753

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=98.81  E-value=5.9e-09  Score=59.73  Aligned_cols=75  Identities=23%  Similarity=0.331  Sum_probs=55.1

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .++.++++|+|+ |.+|+.+++.|...|. +++++.|+.++......  ...  ....+.+++.+.+.++|+||++.+.+
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~--~~~--~~~~~~~~~~~~l~~~Divi~atss~   95 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR--DLG--GEAVRFDELVDHLARSDVVVSATAAP   95 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH--HHT--CEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHH--hhh--cccccchhHHHHhccCCEEEEecCCC
Confidence            356789999997 9999999999999997 68888888654311111  111  12334567788899999999999876


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        96 ~   96 (159)
T d1gpja2          96 H   96 (159)
T ss_dssp             S
T ss_pred             C
Confidence            5

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.79  E-value=2.3e-08  Score=56.38  Aligned_cols=75  Identities=20%  Similarity=0.262  Sum_probs=50.3

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccc--cccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRT--SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ||.|+||+|.+|++++..|...+.  ++.+++.++.+....  .+..............+..+.++++|+|+.++|.+.
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~   80 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPR   80 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCC
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCC
Confidence            799999989999999999988774  688888754322111  111111111123345666788999999999999754

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.2e-08  Score=63.41  Aligned_cols=76  Identities=13%  Similarity=0.181  Sum_probs=50.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEE---cCCCCcccccc--------c-ccccccccccChHHHHHhhc-----
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYA---RPVTENSRTSK--------L-EIHKEFQELDEHEKIISILK-----   70 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~---r~~~~~~~~~~--------~-~~~~~~~d~~~~~~~~~~~~-----   70 (104)
                      +.++||||++.||+++++.|++.|.+++.+.   |+.........        . .......|+.|++++.+++.     
T Consensus         3 kVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g   82 (285)
T d1jtva_           3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG   82 (285)
T ss_dssp             EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred             CEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcccc
Confidence            3568899999999999999999998755443   33222211000        0 00111128889888877753     


Q ss_pred             cccEEEEcccCcC
Q 046878           71 EVGVVISTVAYPQ   83 (104)
Q Consensus        71 ~~d~vv~~a~~~~   83 (104)
                      ..|+++|++|...
T Consensus        83 ~idilvnnag~~~   95 (285)
T d1jtva_          83 RVDVLVCNAGLGL   95 (285)
T ss_dssp             CCSEEEECCCCCC
T ss_pred             chhhhhhcccccc
Confidence            5799999998754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=98.77  E-value=3e-09  Score=61.01  Aligned_cols=68  Identities=16%  Similarity=0.257  Sum_probs=45.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |||.|+|+ |.+|+.+++.|.+.|++|++++|+++..+.........   ...+.   .++++++|+||-+.+..
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~---~~~~~---~~~~~~~DiIilavp~~   68 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVD---EAGQD---LSLLQTAKIIFLCTPIQ   68 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCS---EEESC---GGGGTTCSEEEECSCHH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccc---eeeee---cccccccccccccCcHh
Confidence            57999996 99999999999999999999998865432211111111   01111   23567888888777643

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=98.76  E-value=1.1e-07  Score=49.66  Aligned_cols=86  Identities=17%  Similarity=0.132  Sum_probs=57.5

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      .++++|+|+|. |..|.++++.|.+.|++|++.+.+...... ......... .+...+  ...+.++|.||.+.|.+. 
T Consensus         3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~-~~~~~~~~~-~~~~~~--~~~~~~~d~vi~SPGi~~-   76 (93)
T d2jfga1           3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL-DKLPEAVER-HTGSLN--DEWLMAADLIVASPGIAL-   76 (93)
T ss_dssp             CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG-GGSCTTSCE-EESBCC--HHHHHHCSEEEECTTSCT-
T ss_pred             cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH-HHHhhccce-eecccc--hhhhccCCEEEECCCCCC-
Confidence            46789999997 999999999999999999999987643311 111111100 111111  233568899999998764 


Q ss_pred             hhHHHHHHHHHHhC
Q 046878           85 LDQLKIVDAIKVAG   98 (104)
Q Consensus        85 ~~~~~l~~~~~~~~   98 (104)
                        ..+++..+.+.+
T Consensus        77 --~~~~~~~a~~~g   88 (93)
T d2jfga1          77 --AHPSLSAAADAG   88 (93)
T ss_dssp             --TSHHHHHHHHTT
T ss_pred             --CCHHHHHHHHcC
Confidence              356777777776

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=98.76  E-value=1.2e-08  Score=62.21  Aligned_cols=36  Identities=22%  Similarity=0.310  Sum_probs=33.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      ...+||||++.||.++++.|+++|++|++.+|+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~   37 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG   37 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence            467999999999999999999999999999998654

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.76  E-value=5.2e-09  Score=64.03  Aligned_cols=79  Identities=14%  Similarity=0.155  Sum_probs=56.1

Q ss_pred             CCCCCCeEEEEccCChhhHHHHHHHHh---CCCeEEEEEcCCCCcccccc--------cccccccccccChHHHHHhhc-
Q 046878            3 GENTKPKILIFGGTGYLGKYMVKASVS---SGHNTFVYARPVTENSRTSK--------LEIHKEFQELDEHEKIISILK-   70 (104)
Q Consensus         3 ~~~~~~~i~i~Ga~G~iG~~l~~~l~~---~~~~v~~~~r~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~-   70 (104)
                      ..++.+.++||||++.||+++++.|.+   +|+.|++++|+.+..+....        ........|+.+++++.++++ 
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            346777889999999999999999975   68999999998765422110        011111128888887776642 


Q ss_pred             ----------cccEEEEcccC
Q 046878           71 ----------EVGVVISTVAY   81 (104)
Q Consensus        71 ----------~~d~vv~~a~~   81 (104)
                                ..|+++|++|.
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~  102 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCC
T ss_pred             HHHhhhhccCceEEEEecccc
Confidence                      35789999885

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=98.74  E-value=3.3e-08  Score=60.80  Aligned_cols=75  Identities=9%  Similarity=0.138  Sum_probs=51.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc----------ccc---------------ccccccccccCh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----------SKL---------------EIHKEFQELDEH   62 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~----------~~~---------------~~~~~~~d~~~~   62 (104)
                      ...+||||++.||+++++.|+++|++|.+.+++.......          ...               .......|+.+.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            4678999999999999999999999999888765332000          000               000001156677


Q ss_pred             HHHHHhh-------ccccEEEEcccCc
Q 046878           63 EKIISIL-------KEVGVVISTVAYP   82 (104)
Q Consensus        63 ~~~~~~~-------~~~d~vv~~a~~~   82 (104)
                      +++.+++       ..+|++||++|..
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~  109 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSF  109 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCcc
Confidence            7666654       4689999999975

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=98.73  E-value=1e-08  Score=63.58  Aligned_cols=41  Identities=15%  Similarity=0.084  Sum_probs=35.8

Q ss_pred             CCCCCCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            1 MEGENTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      |-..++.++++||||+|  .||+++++.|+++|.+|.+.+|++
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~   44 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVP   44 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCch
Confidence            45567889999999876  799999999999999999888753

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3.2e-08  Score=60.01  Aligned_cols=41  Identities=20%  Similarity=0.225  Sum_probs=37.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +++.+.++||||++.||.++++.|+++|++|++++|+.+..
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~   42 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGG   42 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHH
Confidence            36778999999999999999999999999999999988665

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=98.70  E-value=8.6e-09  Score=59.68  Aligned_cols=75  Identities=11%  Similarity=0.026  Sum_probs=50.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc-------ccccc-ccccChHHHHHhhccccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE-------IHKEF-QELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~-------~~~~~-~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      +||.|+|+ |.+|..++..|.++|++|.+++|+++..+......       ..... .......++.+.++++|+||.+.
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            68999997 99999999999999999999999865432111100       00000 01111234567788999999988


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      +...
T Consensus        81 ~~~~   84 (184)
T d1bg6a2          81 PAIH   84 (184)
T ss_dssp             CGGG
T ss_pred             chhH
Confidence            7654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.70  E-value=9.9e-09  Score=58.72  Aligned_cols=36  Identities=28%  Similarity=0.285  Sum_probs=32.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |||.++|. |.+|+.+++.|+++|++|++.+|++++.
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~   36 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAI   36 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchh
Confidence            57999995 9999999999999999999999987554

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.69  E-value=1.4e-08  Score=58.11  Aligned_cols=37  Identities=19%  Similarity=0.190  Sum_probs=32.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |++|.++|. |.+|.++++.|.++|++|.+++|++++.
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~   37 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAV   37 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhh
Confidence            358999995 9999999999999999999999986553

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.66  E-value=5.5e-08  Score=54.73  Aligned_cols=84  Identities=15%  Similarity=0.201  Sum_probs=47.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +++|.|+||||++|+.+++.|.+++|   ++..+..+....+......  ... ...+.+  ...+.++|++|.+++...
T Consensus         2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~~--~~~-~~~~~~--~~~~~~~d~vf~a~p~~~   76 (144)
T d2hjsa1           2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAE--SSL-RVGDVD--SFDFSSVGLAFFAAAAEV   76 (144)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEETT--EEE-ECEEGG--GCCGGGCSEEEECSCHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeecc--ccc-hhccch--hhhhccceEEEecCCcch
Confidence            46899999999999999999976554   4665554433221111000  000 111111  122567899998887532


Q ss_pred             hhhHHHHHHHHHHhC
Q 046878           84 LLDQLKIVDAIKVAG   98 (104)
Q Consensus        84 ~~~~~~l~~~~~~~~   98 (104)
                         .......+.+.+
T Consensus        77 ---s~~~~~~~~~~g   88 (144)
T d2hjsa1          77 ---SRAHAERARAAG   88 (144)
T ss_dssp             ---HHHHHHHHHHTT
T ss_pred             ---hhhhccccccCC
Confidence               344444444443

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.65  E-value=2.2e-08  Score=58.31  Aligned_cols=75  Identities=19%  Similarity=0.232  Sum_probs=51.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc--cccccccccccc------ccccChHHHHHhhccccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN--SRTSKLEIHKEF------QELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~--~~~~~~~~~~~~------~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      |+|.|+|+ |.+|.+++..|.++|++|.++.|+....  .........+..      ..+.-.+++.++++++|+|+.+.
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av   79 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV   79 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence            58999997 9999999999999999999998854321  000000000000      12333567788899999999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      +...
T Consensus        80 ps~~   83 (180)
T d1txga2          80 STDG   83 (180)
T ss_dssp             CGGG
T ss_pred             chhh
Confidence            8654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.64  E-value=1.2e-08  Score=59.14  Aligned_cols=37  Identities=30%  Similarity=0.465  Sum_probs=33.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |||.|+||+|.+|+++++.|.++|++|.+++|++++.
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~   37 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA   37 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            5799998789999999999999999999999987654

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=98.61  E-value=3.5e-08  Score=57.64  Aligned_cols=77  Identities=13%  Similarity=0.100  Sum_probs=43.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++.||.|+||||++|+.+++.|..+.+ ++..+..+....... ....+.....+..........+.++|++|.+++..
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvvf~alp~~   82 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVAVKDADFSNVDAVFCCLPHG   82 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBCGGGCCGGGCSEEEECCSSS
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchhhhhhhhcccceeeeccccc
Confidence            456899999999999999999998764 555554332222111 11111111111111111123356889999888754

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=98.61  E-value=7.1e-08  Score=55.99  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=42.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccc-ccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTS-KLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |.+|.|+||||++|+.+++.|.++.+ ++..+..+....+... ...+.....++.. .+..+...++|++|.+++..
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p~~~~~~~~~~-~~~~~~~~~~dvvf~a~p~~   77 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFPSTLENSILSE-FDPEKVSKNCDVLFTALPAG   77 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCGGGCCCCBCBC-CCHHHHHHHCSEEEECCSTT
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCchhhccccccc-cCHhHhccccceEEEccccH
Confidence            45899999999999999999988753 5555543332221111 0111110011111 11233345799999888764

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=98.58  E-value=1.4e-07  Score=54.55  Aligned_cols=36  Identities=17%  Similarity=0.333  Sum_probs=32.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+|.++|. |.+|..+++.|+++|++|++++|++++.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~   38 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKV   38 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHH
Confidence            47999996 9999999999999999999999988655

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.55  E-value=2.1e-07  Score=54.12  Aligned_cols=76  Identities=8%  Similarity=0.120  Sum_probs=56.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccc--------cccccccccccChHHHHHhhccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSK--------LEIHKEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      .+.++++|+|+ |..|++++..|...|. .++++.|+++..+....        ........++.+.+.+.+.+.++|+|
T Consensus        16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii   94 (182)
T d1vi2a1          16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL   94 (182)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence            35579999997 9999999999999885 78899998765522111        11111223777888888889999999


Q ss_pred             EEcccC
Q 046878           76 ISTVAY   81 (104)
Q Consensus        76 v~~a~~   81 (104)
                      ||+.+.
T Consensus        95 IN~Tp~  100 (182)
T d1vi2a1          95 TNGTKV  100 (182)
T ss_dssp             EECSST
T ss_pred             ccccCC
Confidence            999875

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.54  E-value=1.2e-07  Score=56.83  Aligned_cols=37  Identities=22%  Similarity=0.220  Sum_probs=34.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |+++||||++.||+++++.|+++|++|.+.+|+.+..
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~   38 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE   38 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc
Confidence            6899999999999999999999999999999987544

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.51  E-value=6.3e-08  Score=56.27  Aligned_cols=32  Identities=22%  Similarity=0.271  Sum_probs=26.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYA   38 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~   38 (104)
                      |++|.|+||||++|+.+++.|..+. .++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            4689999999999999999999975 3555443

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=98.49  E-value=6.6e-07  Score=52.02  Aligned_cols=63  Identities=16%  Similarity=0.219  Sum_probs=44.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.+|+.+++.+..-|.+|.+.++++......             -.+++.++++.+|+|+.+.+.
T Consensus        40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~~~-------------~~~~l~ell~~sDiv~~~~pl  102 (181)
T d1qp8a1          40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGPWR-------------FTNSLEEALREARAAVCALPL  102 (181)
T ss_dssp             CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSSSC-------------CBSCSHHHHTTCSEEEECCCC
T ss_pred             ccCceEEEecc-ccccccceeeeecccccccccccccccccee-------------eeechhhhhhccchhhccccc
Confidence            45689999996 9999999999999999999998876433100             011244556666666666554

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=98.46  E-value=7.6e-08  Score=54.52  Aligned_cols=68  Identities=16%  Similarity=0.198  Sum_probs=47.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |||.++|+ |.+|+++++.|.+.++++++..|++++.+...  .... ..-..   +..++++++|+||-+..+.
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~--~~~g-~~~~~---~~~~~~~~~dvIilavkp~   68 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIA--EQLA-LPYAM---SHQDLIDQVDLVILGIKPQ   68 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHH--HHHT-CCBCS---SHHHHHHTCSEEEECSCGG
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhc--cccc-eeeec---hhhhhhhccceeeeecchH
Confidence            57999996 99999999999999999999988865442111  1111 11112   2355567889998888654

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.46  E-value=2.4e-07  Score=52.19  Aligned_cols=73  Identities=18%  Similarity=0.191  Sum_probs=46.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc----cccccc-c-cccccccChHHHHHhhccccEEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR----TSKLEI-H-KEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~----~~~~~~-~-~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      +.+||.|+|+ |++|..++..|+..+  .++.++++++...+.    ..+... . .......|.    +.++++|+|+.
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~----~~~~~adivvi   78 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY----SDCKDADLVVI   78 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG----GGGTTCSEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH----HHhccccEEEE
Confidence            4569999996 999999999999877  479999987643210    000000 0 000011121    34689999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|.+.
T Consensus        79 tag~~~   84 (146)
T d1ez4a1          79 TAGAPQ   84 (146)
T ss_dssp             CCCC--
T ss_pred             eccccc
Confidence            999865

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.44  E-value=9.2e-08  Score=56.47  Aligned_cols=74  Identities=19%  Similarity=0.211  Sum_probs=49.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccc-ccc--ccc----------ccccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKL-EIH--KEF----------QELDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~-~~~--~~~----------~d~~~~~~~~~~~~~~d~   74 (104)
                      |||.|+|. |++|..++..|++.|++|++++.+....+...+- ...  +..          ..+.-..++.+++.++|+
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            57999996 9999999999999999999999875443111000 000  000          012223345666788999


Q ss_pred             EEEcccCc
Q 046878           75 VISTVAYP   82 (104)
Q Consensus        75 vv~~a~~~   82 (104)
                      +|.|.+.+
T Consensus        80 i~i~VpTP   87 (202)
T d1mv8a2          80 SFICVGTP   87 (202)
T ss_dssp             EEECCCCC
T ss_pred             EEEecCcc
Confidence            99999875

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=98.43  E-value=5.1e-08  Score=55.14  Aligned_cols=68  Identities=15%  Similarity=0.057  Sum_probs=47.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      |||.++|. |.+|+.+++.|.++|+++++.++++....... ....    .+  .++..++++++|+||.+.+...
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-~~~~----~~--~~~~~e~~~~~diIi~~v~~~~   68 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER-ARTV----GV--TETSEEDVYSCPVVISAVTPGV   68 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH-HHHH----TC--EECCHHHHHTSSEEEECSCGGG
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh-hhcc----cc--cccHHHHHhhcCeEEEEecCch
Confidence            58999995 99999999999999999988877664431110 0000    11  1123456788999999988654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=98.41  E-value=9.9e-08  Score=53.94  Aligned_cols=36  Identities=17%  Similarity=0.378  Sum_probs=31.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~   44 (104)
                      |+|+++|+ |.+|+++++.|++.+ +++++.+|++++.
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~   37 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKR   37 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHH
Confidence            58999997 999999999998877 8999999987654

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.40  E-value=3.5e-07  Score=51.41  Aligned_cols=75  Identities=12%  Similarity=0.183  Sum_probs=44.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHh-CC--CeEEEEEcCCCCccc---ccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVS-SG--HNTFVYARPVTENSR---TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~-~~--~~v~~~~r~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +||.|+|++|.+|++++..|.. .+  .++.+++..+.....   ..+.........+...+. .+.++++|+||.++|.
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~~~~~~~~~~~~~-~~~~~~aDvvvitaG~   79 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGFSGEDA-TPALEGADVVLISAGV   79 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCSSCEEEEECSSCC-HHHHTTCSEEEECCSC
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCccccCCcEEEcCCC-ccccCCCCEEEECCCc
Confidence            5899999889999999988754 33  578888865422100   001000000011111112 3468899999999997


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      +.
T Consensus        80 ~~   81 (145)
T d2cmda1          80 RR   81 (145)
T ss_dssp             CC
T ss_pred             cC
Confidence            64

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=98.39  E-value=1.4e-06  Score=46.78  Aligned_cols=66  Identities=11%  Similarity=0.248  Sum_probs=49.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc--cccEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK--EVGVVI   76 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~--~~d~vv   76 (104)
                      .||+|+|+ |.+|+-++....+.|+++.+++.++...  ..+........++.|.+.+.+...  .+|+|-
T Consensus        12 ~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~P--A~~va~~~i~~~~~d~~~l~~~~~~~~~DviT   79 (111)
T d1kjqa2          12 TRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAP--AMHVAHRSHVINMLDGDALRRVVELEKPHYIV   79 (111)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCG--GGGGSSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred             CEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCc--hhhcCCeEEECCCCCHHHHHHHHHhhCCceEE
Confidence            58999996 9999999999999999999998876544  222211122248889998888764  468774

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.38  E-value=4.4e-07  Score=52.33  Aligned_cols=36  Identities=17%  Similarity=0.325  Sum_probs=32.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |||.++|. |.+|.++++.|+++|++|++++|++++.
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~   37 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKS   37 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHH
Confidence            47999995 9999999999999999999999986554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=98.38  E-value=2.9e-07  Score=52.68  Aligned_cols=37  Identities=24%  Similarity=0.397  Sum_probs=30.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~   44 (104)
                      |++|+|+|+ |.+|..+++.|.+.|+  +|++++++++..
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~   39 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESI   39 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHH
Confidence            357999996 9999999999999886  577777776443

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.38  E-value=1.8e-07  Score=52.66  Aligned_cols=76  Identities=20%  Similarity=0.240  Sum_probs=47.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcc------ccccccccccc-cccc-ChHHHHHhhccccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENS------RTSKLEIHKEF-QELD-EHEKIISILKEVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~------~~~~~~~~~~~-~d~~-~~~~~~~~~~~~d~vv~   77 (104)
                      |||.|+||+|.+|+.++..|...+  .++.++++++....      +.......... .+.. ...+-.+.++++|+|+.
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~~l~~aDvVVi   80 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLRIIDESDVVII   80 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGGGGTTCSEEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHHHhccceEEEE
Confidence            579999999999999999999887  48888888753210      00000000000 0000 00111346789999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|.+.
T Consensus        81 tAG~~~   86 (145)
T d1hyea1          81 TSGVPR   86 (145)
T ss_dssp             CCSCCC
T ss_pred             eccccc
Confidence            999765

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=98.38  E-value=3.7e-07  Score=51.39  Aligned_cols=39  Identities=28%  Similarity=0.302  Sum_probs=34.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+++|+|+|+.|.+|+.+++.|.++||+|.+++|+....
T Consensus         8 ~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~   46 (152)
T d2pv7a2           8 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV   46 (152)
T ss_dssp             TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred             CCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence            456999999779999999999999999999999986544

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=98.34  E-value=2e-06  Score=51.48  Aligned_cols=65  Identities=14%  Similarity=0.194  Sum_probs=44.7

Q ss_pred             ccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChH----HHHHhhccccEEEEcccCcC
Q 046878           14 GGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE----KIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus        14 Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~----~~~~~~~~~d~vv~~a~~~~   83 (104)
                      .+||.+|.+|++++..+|++|+++.-..... .+......    .+...+    .+.+.++++|++|++|+...
T Consensus        29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-~p~~~~~~----~~~t~~~m~~~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          29 HSSGKMGFAIAAAAARRGANVTLVSGPVSLP-TPPFVKRV----DVMTALEMEAAVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             CCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-CCTTEEEE----ECCSHHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred             CCcHHHHHHHHHHHHHcCCchhhhhcccccC-cccccccc----eehhhHHHHHHHHhhhccceeEeeeechhh
Confidence            3579999999999999999999887654332 22222222    233333    33445678999999999865

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=98.33  E-value=2.2e-06  Score=49.13  Aligned_cols=68  Identities=18%  Similarity=0.196  Sum_probs=41.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC-CCeEEEE-EcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      |++.|++|+|+ |++|+..++.+.+. +.+++.+ +++++...   ... .   ...   +++.....++|+|+.+++..
T Consensus         1 M~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---~~~-~---~~~---~~~~~~~~~~D~Vvi~tp~~   69 (170)
T d1f06a1           1 MTNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---KTP-V---FDV---ADVDKHADDVDVLFLCMGSA   69 (170)
T ss_dssp             CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---SSC-E---EEG---GGGGGTTTTCSEEEECSCTT
T ss_pred             CCcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccccc---ccc-c---ccc---hhhhhhccccceEEEeCCCc
Confidence            55678999996 99999999999875 3565544 44433221   111 0   011   12233345788888887765


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        70 ~   70 (170)
T d1f06a1          70 T   70 (170)
T ss_dssp             T
T ss_pred             c
Confidence            3

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=98.32  E-value=1.8e-06  Score=50.63  Aligned_cols=68  Identities=15%  Similarity=0.185  Sum_probs=44.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.||+.+++.|..-|.+|...++...... ...       ..+...+++.++++.+|+|+.+.+.
T Consensus        47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~-~~~-------~~~~~~~~l~~ll~~sD~i~~~~pl  114 (193)
T d1mx3a1          47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGV-ERA-------LGLQRVSTLQDLLFHSDCVTLHCGL  114 (193)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTH-HHH-------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             eeCceEEEecc-ccccccceeeeeccccceeeccCcccccc-hhh-------hccccccchhhccccCCEEEEeecc
Confidence            45679999996 99999999999999999999887654320 000       0111223345556666666555554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.30  E-value=3.7e-07  Score=51.83  Aligned_cols=75  Identities=15%  Similarity=0.190  Sum_probs=48.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccccc--cccc---c-cccChHHHHHhhccccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEI--HKEF---Q-ELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~--~~~~---~-d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      +++||.|+|+ |.+|+.++..|...+. ++.+++.++..... ...+.  ....   . ........+++++++|+|+.+
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g-~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvit   83 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEG-KALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVT   83 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHH-HHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEEC
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchh-HHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEe
Confidence            4579999997 9999999988887774 78888877654311 00110  0000   0 111122345678899999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      +|.+
T Consensus        84 ag~~   87 (154)
T d1pzga1          84 AGLT   87 (154)
T ss_dssp             CSCS
T ss_pred             cccc
Confidence            9864

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.30  E-value=1.4e-06  Score=48.71  Aligned_cols=74  Identities=15%  Similarity=0.195  Sum_probs=44.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcccccccccc--cccc-cccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSRTSKLEIH--KEFQ-ELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~~~~~~~~--~~~~-d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +||.|+|+ |.+|+.++..|+..+.  ++.+++++++.... ...+..  ..+. .......-.+.++++|+|+.++|.+
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g-~a~Dl~~~~~~~~~~~~~~~~~~~~~~adivvitag~~   79 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIG-EAMDINHGLPFMGQMSLYAGDYSDVKDCDVIVVTAGAN   79 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCH-HHHHHTTSCCCTTCEEEC--CGGGGTTCSEEEECCCC-
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccce-eeeeeccCcccCCCeeEeeCcHHHhCCCceEEEecccc
Confidence            58999997 9999999999998874  79999988765421 011100  0000 0000111134578999999999976


Q ss_pred             C
Q 046878           83 Q   83 (104)
Q Consensus        83 ~   83 (104)
                      .
T Consensus        80 ~   80 (142)
T d1y6ja1          80 R   80 (142)
T ss_dssp             -
T ss_pred             c
Confidence            5

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=98.27  E-value=1.4e-06  Score=49.97  Aligned_cols=75  Identities=16%  Similarity=0.147  Sum_probs=51.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..+++|.|++|.+|+..++.+...|.+|+++.+++++.+....... ....|+.+.........++|+||.+.|.
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa-~~~i~~~~~~~~~~~~~g~D~v~d~~G~  101 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA-EEAATYAEVPERAKAWGGLDLVLEVRGK  101 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC-SEEEEGGGHHHHHHHTTSEEEEEECSCT
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccccccc-ceeeehhhhhhhhhccccccccccccch
Confidence            44689999999999999999988999999988888765533222211 1112444433333345679999999884

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=98.27  E-value=2.7e-07  Score=53.02  Aligned_cols=72  Identities=17%  Similarity=0.200  Sum_probs=47.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccc-ccccccccc--cccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTS-KLEIHKEFQ--ELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~-~~~~~~~~~--d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      .+.++++|+|+ |..+++++..|.+.|.+++++.|+.++.+... .........  ++.+.     ...++|+|||+.+.
T Consensus        16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~~-----~~~~~dliIN~Tp~   89 (170)
T d1nyta1          16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDEL-----EGHEFDLIINATSS   89 (170)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGG-----TTCCCSEEEECCSC
T ss_pred             CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcccccccccccc-----cccccceeeccccc
Confidence            45679999997 99999999999999989999999875542111 011011111  12111     13568999999865


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus        90 G   90 (170)
T d1nyta1          90 G   90 (170)
T ss_dssp             G
T ss_pred             C
Confidence            3

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.26  E-value=8.5e-07  Score=50.82  Aligned_cols=76  Identities=22%  Similarity=0.285  Sum_probs=56.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+.+++|+|+ |..|..-++.....|..|++++.+.+..+..+..-.......+.+.+.+.+.++++|+||.++-.+
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalip  106 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVP  106 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecC
Confidence            3568999997 999999999999999999999998766532211110010113556788999999999999998654

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=98.25  E-value=5.5e-07  Score=51.62  Aligned_cols=38  Identities=32%  Similarity=0.496  Sum_probs=32.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTEN   44 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~   44 (104)
                      +.++++|+|+ |..+++++..|...|. ++.++.|+.++.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka   54 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTG   54 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHH
Confidence            4568999997 9999999999999995 799999987544

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.23  E-value=5.9e-07  Score=50.61  Aligned_cols=72  Identities=11%  Similarity=0.195  Sum_probs=46.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----cccccc-cc-ccc-cccChHHHHHhhccccEEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLEI-HK-EFQ-ELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~~-~~-~~~-d~~~~~~~~~~~~~~d~vv~   77 (104)
                      ..||.|+|+ |.+|+.++..|...+.  ++.+++++++....    ..+... .. ... -..+    .+.+.++|+|+.
T Consensus         6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d----~~~l~daDvvvi   80 (148)
T d1ldna1           6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD----YDDCRDADLVVI   80 (148)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC----GGGTTTCSEEEE
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC----HHHhccceeEEE
Confidence            468999997 9999999999998774  78888887644210    000000 00 000 0111    245789999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|.+.
T Consensus        81 tag~~~   86 (148)
T d1ldna1          81 CAGANQ   86 (148)
T ss_dssp             CCSCCC
T ss_pred             eccccc
Confidence            999865

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.22  E-value=5.7e-06  Score=47.07  Aligned_cols=74  Identities=12%  Similarity=0.058  Sum_probs=48.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----ccccc---cccccccccChHHHHHhhccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLE---IHKEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~---~~~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      .+.+||.|+|+ |.+|+.++..|...+.  ++.+++++++....    ..+..   .........+    .+.++++|+|
T Consensus        18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d----~~~~~~adiV   92 (160)
T d1i0za1          18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD----YSVTANSKIV   92 (160)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS----GGGGTTCSEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc----hhhcccccEE
Confidence            45579999997 9999999999999885  78888886543310    01100   0000001111    2347899999


Q ss_pred             EEcccCcC
Q 046878           76 ISTVAYPQ   83 (104)
Q Consensus        76 v~~a~~~~   83 (104)
                      +.++|.+.
T Consensus        93 VitAg~~~  100 (160)
T d1i0za1          93 VVTAGVRQ  100 (160)
T ss_dssp             EECCSCCC
T ss_pred             EEecCCcc
Confidence            99999865

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=98.22  E-value=2.4e-06  Score=48.32  Aligned_cols=24  Identities=29%  Similarity=0.429  Sum_probs=21.8

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH   32 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~   32 (104)
                      +|.|+||||++|+.+++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999998888754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=98.21  E-value=3.4e-06  Score=49.59  Aligned_cols=66  Identities=12%  Similarity=0.120  Sum_probs=44.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +..++++|+|. |.||+.+++.|..-|.+|.+.++.....  .. .       +....+++.+.++.+|+|+.+.+.
T Consensus        41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~--~~-~-------~~~~~~~l~~~l~~sDii~~~~pl  106 (197)
T d1j4aa1          41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPE--LE-K-------KGYYVDSLDDLYKQADVISLHVPD  106 (197)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHH--HH-H-------TTCBCSCHHHHHHHCSEEEECSCC
T ss_pred             ccCCeEEEecc-cccchhHHHhHhhhcccccccCcccccc--cc-c-------ceeeeccccccccccccccccCCc
Confidence            45689999996 9999999999999999998887654321  00 0       011123455566677776666654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=98.19  E-value=4.3e-06  Score=48.71  Aligned_cols=69  Identities=13%  Similarity=0.064  Sum_probs=45.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ...+++.|+|. |.+|+.+++.|..-|.+|...++...........       .+....++.+.++++|+|+.+.+.
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~-------~~~~~~~l~~~l~~sD~v~~~~pl  110 (188)
T d2naca1          42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKEL-------NLTWHATREDMYPVCDVVTLNCPL  110 (188)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHHH-------TCEECSSHHHHGGGCSEEEECSCC
T ss_pred             ccccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccccc-------cccccCCHHHHHHhccchhhcccc
Confidence            45679999996 9999999999999999999988865332111000       122223345556667766655554

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=98.18  E-value=2.3e-06  Score=48.12  Aligned_cols=74  Identities=7%  Similarity=0.102  Sum_probs=54.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-cccc--cccc-ccccccChHHHHHh-hccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKL--EIHK-EFQELDEHEKIISI-LKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~--~~~~-~~~d~~~~~~~~~~-~~~~d~vv~~a~~~   82 (104)
                      ..++|+|. |.+|+.+++.|.+.|++++++..+++.... ....  .... ...|..+++.+.++ +.++|.++.+.+..
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d   82 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND   82 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccH
Confidence            46899997 999999999999999999999887643210 1110  1111 12488999998877 78899999888753

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=98.18  E-value=4.9e-06  Score=48.65  Aligned_cols=68  Identities=13%  Similarity=0.147  Sum_probs=44.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ..++++|+|. |.+|+.+++.+..-|.++...++..........       ......+++.++++.+|+|+.+.+.
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~-------~~~~~~~~l~~ll~~sD~v~l~~pl  113 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS-------YQATFHDSLDSLLSVSQFFSLNAPS  113 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH-------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhc-------ccccccCCHHHHHhhCCeEEecCCC
Confidence            4589999996 999999999999999999888776543211000       0111223455566667766655554

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=98.16  E-value=6.3e-06  Score=48.44  Aligned_cols=38  Identities=16%  Similarity=0.246  Sum_probs=32.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      +..++++|+|. |.||+.+++.|..-|.+|.+.++....
T Consensus        43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   80 (199)
T d1dxya1          43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMK   80 (199)
T ss_dssp             GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             ccceeeeeeec-ccccccccccccccceeeeccCCccch
Confidence            44579999996 999999999999999999998876543

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.16  E-value=9.5e-06  Score=45.14  Aligned_cols=73  Identities=14%  Similarity=0.101  Sum_probs=46.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccccc--cccc----cccccChHHHHHhhccccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLE--IHKE----FQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~--~~~~----~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      +||.|+|+ |.+|+.++..|...+  .++.+++.++..... ...+  +...    ...+... .-.+.++++|+|+.++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~-~~~d~~~~~~~~~~~~~i~~~-~~~~~~~dadvvvita   77 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQG-KALDMYESGPVGLFDTKVTGS-NDYADTANSDIVIITA   77 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHH-HHHHHHTTHHHHTCCCEEEEE-SCGGGGTTCSEEEECC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchh-hhhhhhcccchhcccceEEec-CCHHHhcCCeEEEEEE
Confidence            58999997 999999999999887  478899888755421 0001  0000    0011100 1134578999999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      |.+.
T Consensus        78 g~~~   81 (142)
T d1guza1          78 GLPR   81 (142)
T ss_dssp             SCCC
T ss_pred             ecCC
Confidence            9764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.15  E-value=1.8e-06  Score=48.38  Aligned_cols=74  Identities=15%  Similarity=0.179  Sum_probs=46.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCccc----ccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENSR----TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      .||.|+|+ |.+|++++..|..++.  ++.++++++...+.    ..+.............+. .+.++++|+|+.++|.
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~-~~~~~daDvVVitaG~   79 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD-PEICRDADMVVITAGP   79 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC-GGGGTTCSEEEECCCC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCC-HHHhhCCcEEEEeccc
Confidence            58999997 9999999999998874  78888877644310    011000000011111111 2347889999999998


Q ss_pred             cC
Q 046878           82 PQ   83 (104)
Q Consensus        82 ~~   83 (104)
                      +.
T Consensus        80 ~~   81 (143)
T d1llda1          80 RQ   81 (143)
T ss_dssp             CC
T ss_pred             cc
Confidence            65

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.13  E-value=2.7e-06  Score=49.13  Aligned_cols=75  Identities=12%  Similarity=0.104  Sum_probs=45.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-----C--eEEEEEcCCCCccccccc----cccc--ccccccChHHHHHhhccccE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-----H--NTFVYARPVTENSRTSKL----EIHK--EFQELDEHEKIISILKEVGV   74 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-----~--~v~~~~r~~~~~~~~~~~----~~~~--~~~d~~~~~~~~~~~~~~d~   74 (104)
                      .||.|+||+|.+|++++..|....     .  .+.+++.+.... .....    ....  ......-..+..+.++++|+
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~-~l~g~~mdl~d~a~~~~~~~~~~~~~~~~~~~aDv  103 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQ-ALEGVAMELEDSLYPLLREVSIGIDPYEVFEDVDW  103 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccc-hhcchhhhhcccccccccCccccccchhhccCCce
Confidence            479999999999999999998643     1  344444443221 00100    0000  00111223345778899999


Q ss_pred             EEEcccCcC
Q 046878           75 VISTVAYPQ   83 (104)
Q Consensus        75 vv~~a~~~~   83 (104)
                      ||.++|.+.
T Consensus       104 Vvi~ag~~r  112 (175)
T d7mdha1         104 ALLIGAKPR  112 (175)
T ss_dssp             EEECCCCCC
T ss_pred             EEEeeccCC
Confidence            999999875

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=98.12  E-value=1.6e-05  Score=45.20  Aligned_cols=76  Identities=20%  Similarity=0.310  Sum_probs=53.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      ...+++|.|+ |.+|...++.+...|.+++++++++++.+....... ..+.|+.+.+......+++|++|.++|...
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGa-d~~i~~~~~~~~~~~~~~~D~vid~~g~~~  105 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA-DEVVNSRNADEMAAHLKSFDFILNTVAAPH  105 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC-SEEEETTCHHHHHTTTTCEEEEEECCSSCC
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCC-cEEEECchhhHHHHhcCCCceeeeeeecch
Confidence            3468999996 999999998888889888888887765422222111 112256666666666678999999998653

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.12  E-value=1.2e-05  Score=46.79  Aligned_cols=66  Identities=18%  Similarity=0.154  Sum_probs=44.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ...++++|+|. |.+|+.+++.+..-|.+|...++....... .          ....+++.++++.+|+|+.+++..
T Consensus        42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-~----------~~~~~~l~ell~~sDii~i~~plt  107 (188)
T d1sc6a1          42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLG-N----------ATQVQHLSDLLNMSDVVSLHVPEN  107 (188)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCT-T----------CEECSCHHHHHHHCSEEEECCCSS
T ss_pred             ccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhh-h----------hhhhhhHHHHHhhccceeecccCC
Confidence            35579999996 999999999999999999998876432210 0          011123455566666666665543

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.12  E-value=1.1e-06  Score=49.80  Aligned_cols=76  Identities=12%  Similarity=0.148  Sum_probs=43.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC----e-E--EEEEcCCCCccccccc----cccc--ccccccChHHHHHhhcccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH----N-T--FVYARPVTENSRTSKL----EIHK--EFQELDEHEKIISILKEVG   73 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~----~-v--~~~~r~~~~~~~~~~~----~~~~--~~~d~~~~~~~~~~~~~~d   73 (104)
                      ++||.|+||+|.+|++++..|...+.    . +  .++.... ..+.....    ....  ............+.++++|
T Consensus         4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad   82 (154)
T d1y7ta1           4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ-AMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDAD   82 (154)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG-GHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcccc-chhhHcCchhhhhccccccccccccCCchhhhccccc
Confidence            45899999999999999999987652    1 1  1211111 11000000    0000  0012222334467889999


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      +|+.++|.+.
T Consensus        83 vViitaG~~~   92 (154)
T d1y7ta1          83 YALLVGAAPR   92 (154)
T ss_dssp             EEEECCCCCC
T ss_pred             EEEeecCcCC
Confidence            9999999765

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=98.11  E-value=3.9e-07  Score=52.49  Aligned_cols=74  Identities=15%  Similarity=0.220  Sum_probs=46.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+.++++|+|+ |..+++++..|.+.+.+++++.|+.++.+.. ........+..+.. +  ...+.++|++||+++..
T Consensus        16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~-~--~~~~~~~diiIN~tp~g   90 (171)
T d1p77a1          16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM-D--SIPLQTYDLVINATSAG   90 (171)
T ss_dssp             CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG-G--GCCCSCCSEEEECCCC-
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhh-c--cccccccceeeeccccc
Confidence            45678999996 9999999999998778899999987554211 11110100111110 0  11246789999998764

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.09  E-value=3.5e-06  Score=48.63  Aligned_cols=75  Identities=9%  Similarity=0.059  Sum_probs=50.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccC---hHHHHHhh--ccccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDE---HEKIISIL--KEVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~--~~~d~vv~~a~   80 (104)
                      +..+++|+||+|.+|...++.....|.+|+++.+++++.+......... ..+..+   .+.+.+..  .++|+||.+.|
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga~~-vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG  107 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGFDA-AFNYKTVNSLEEALKKASPDGYDCYFDNVG  107 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCSE-EEETTSCSCHHHHHHHHCTTCEEEEEESSC
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhhhh-hcccccccHHHHHHHHhhcCCCceeEEecC
Confidence            3578999999999999999999999999999998876543222221111 112222   23333332  46999999998


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       108 ~  108 (182)
T d1v3va2         108 G  108 (182)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.08  E-value=2.1e-06  Score=48.84  Aligned_cols=74  Identities=12%  Similarity=0.045  Sum_probs=47.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCcc----cccccc-cc--cccccccChHHHHHhhccccEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTENS----RTSKLE-IH--KEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~~----~~~~~~-~~--~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      |+..||.|+|+ |.+|..++..|...+.  ++.+++++++...    +..+.. ..  .......+    .+.++++|+|
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d----~~~~~~adiv   91 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD----YNVSANSKLV   91 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS----GGGGTTEEEE
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc----hhhhccccEE
Confidence            55578999996 9999999999998874  7888887754321    011000 00  00000111    2346899999


Q ss_pred             EEcccCcC
Q 046878           76 ISTVAYPQ   83 (104)
Q Consensus        76 v~~a~~~~   83 (104)
                      +.++|.+.
T Consensus        92 vitag~~~   99 (159)
T d2ldxa1          92 IITAGARM   99 (159)
T ss_dssp             EECCSCCC
T ss_pred             EEeccccc
Confidence            99999865

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=98.08  E-value=1.1e-06  Score=50.21  Aligned_cols=31  Identities=19%  Similarity=0.368  Sum_probs=25.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhC-CCeEEEE
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSS-GHNTFVY   37 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~   37 (104)
                      ..||+|.|++|.+|+.+++.+.+. +.++...
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~   35 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAA   35 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            458999999999999999998875 4565543

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.08  E-value=4.8e-06  Score=47.47  Aligned_cols=75  Identities=16%  Similarity=0.170  Sum_probs=49.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccC-hHHHHHhhccccEEEEcccCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDE-HEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +..+++|+|+ |.+|...++.+...|.+|+++++++++.+....... ....+..+ .+.........|.++.+.+..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa-~~~i~~~~~~~~~~~~~~~~d~vi~~~~~~  102 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA-DHYIATLEEGDWGEKYFDTFDLIVVCASSL  102 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC-SEEEEGGGTSCHHHHSCSCEEEEEECCSCS
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCC-cEEeeccchHHHHHhhhcccceEEEEecCC
Confidence            3468999997 999999998888889999999998876633222211 11112322 233344456789999987754

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.07  E-value=1.9e-05  Score=43.22  Aligned_cols=70  Identities=20%  Similarity=0.241  Sum_probs=45.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEE-EcCCCCcccccccccccccccccChHHHHHhhc-----cccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISILK-----EVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~~d~vv~~a~~   81 (104)
                      +||+|.|++|.+|+.+.+.+.+.++++... +++...  .....   ..+.|++.|+.+.+.++     +.-+|+-..|.
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~--~~~~~---DVvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG~   75 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE--ELDSP---DVVIDFSSPEALPKTVDLCKKYRAGLVLGTTAL   75 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE--ECSCC---SEEEECSCGGGHHHHHHHHHHHTCEEEECCCSC
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH--HhccC---CEEEEecCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence            479999999999999999888888876644 332211  11121   22237777776655542     45677777775


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus        76 ~   76 (128)
T d1vm6a3          76 K   76 (128)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=2.9e-06  Score=49.59  Aligned_cols=39  Identities=15%  Similarity=0.353  Sum_probs=34.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |..++|.|+|+ |.+|+.++..++.+|++|.+++++++..
T Consensus         2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l   40 (192)
T d1f0ya2           2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDIL   40 (192)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHH
Confidence            45579999997 9999999999999999999999987543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=98.06  E-value=1.9e-05  Score=42.14  Aligned_cols=86  Identities=16%  Similarity=0.174  Sum_probs=54.0

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccc-cccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQ-ELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~-d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++.++++|+|+ |.+|...++.|++.|..|++++........ ........... .+.+     ..+.+++.|+.+.+..
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~~~~i~~~~~~~~~-----~dl~~~~lv~~at~d~   83 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDE-----TLLDSCWLAIAATDDD   83 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCG-----GGGTTCSEEEECCSCH
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHhcCCceeeccCCCH-----HHhCCCcEEeecCCCH
Confidence            56789999997 999999999999999999888765433210 00111111111 2221     2256788888776654


Q ss_pred             ChhhHHHHHHHHHHhC
Q 046878           83 QLLDQLKIVDAIKVAG   98 (104)
Q Consensus        83 ~~~~~~~l~~~~~~~~   98 (104)
                      .  ....+.+.+++.+
T Consensus        84 ~--~n~~i~~~a~~~~   97 (113)
T d1pjqa1          84 T--VNQRVSDAAESRR   97 (113)
T ss_dssp             H--HHHHHHHHHHHTT
T ss_pred             H--HHHHHHHHHHHcC
Confidence            3  3356667776654

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.03  E-value=1.8e-06  Score=48.11  Aligned_cols=72  Identities=24%  Similarity=0.260  Sum_probs=45.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccccccccccc--cc---ccccChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLEIHK--EF---QELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~--~~---~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      +||.|+|+ |.+|+.++..|..++  .++.+++++++.... ...+...  .+   ..... +. .+.++++|+|+.++|
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g-~~~Dl~~~~~~~~~~~~~~-~~-~~~~~~adivvitag   76 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEG-DALDLIHGTPFTRRANIYA-GD-YADLKGSDVVIVAAG   76 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHH-HHHHHHHHGGGSCCCEEEE-CC-GGGGTTCSEEEECCC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccc-hhccccccccccccccccC-Cc-HHHhcCCCEEEEecc
Confidence            58999997 999999999888776  478888877544311 0001000  00   00000 01 334789999999998


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      .+.
T Consensus        77 ~~~   79 (140)
T d1a5za1          77 VPQ   79 (140)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            865

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.02  E-value=4.5e-06  Score=48.18  Aligned_cols=76  Identities=16%  Similarity=0.173  Sum_probs=49.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccCh-HHHHHhh--ccccEEEEcccCcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEH-EKIISIL--KEVGVVISTVAYPQ   83 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~--~~~d~vv~~a~~~~   83 (104)
                      ..+++|.||+|.+|...++.+...|.+|++.++++++.+......-.. ..|+.+. ++..+..  +++|+||.+.|...
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa~~-vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~  110 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGAKE-VLAREDVMAERIRPLDKQRWAAAVDPVGGRT  110 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTCSE-EEECC---------CCSCCEEEEEECSTTTT
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhcccce-eeecchhHHHHHHHhhccCcCEEEEcCCchh
Confidence            468999999999999999998899999999999887763322221111 1123221 1112222  36899999998755

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.02  E-value=9.5e-06  Score=47.07  Aligned_cols=68  Identities=12%  Similarity=0.083  Sum_probs=45.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ...++++|+|. |.+|+.+++.+..-|.+|.+.++.......  ...       .....++.++++.+|+|+.+.+..
T Consensus        42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~--~~~-------~~~~~~l~ell~~sDiv~~~~Plt  109 (184)
T d1ygya1          42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARA--AQL-------GIELLSLDDLLARADFISVHLPKT  109 (184)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHH--HHH-------TCEECCHHHHHHHCSEEEECCCCS
T ss_pred             ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHH--hhc-------CceeccHHHHHhhCCEEEEcCCCC
Confidence            44579999996 999999999999989999888876532200  000       001123456677777777666653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.00  E-value=2.4e-06  Score=48.32  Aligned_cols=77  Identities=10%  Similarity=0.085  Sum_probs=45.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCCCCcccccccc----cc--cccccccChHHHHHhhccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPVTENSRTSKLE----IH--KEFQELDEHEKIISILKEV   72 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~~~~~~~~~~~----~~--~~~~d~~~~~~~~~~~~~~   72 (104)
                      +++||.|+||+|.+|++++..|...+.       ++...+.+.... ......    ..  .......-.....+.++++
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMG-VLDGVLMELQDCALPLLKDVIATDKEEIAFKDL   80 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHH-HHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTC
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchh-hhhhhhhhhcccccccccccccCcccccccCCc
Confidence            456999999999999999999876431       244444332211 001110    00  0001111122346778999


Q ss_pred             cEEEEcccCcC
Q 046878           73 GVVISTVAYPQ   83 (104)
Q Consensus        73 d~vv~~a~~~~   83 (104)
                      |+|+.++|.+.
T Consensus        81 dvVVitag~~~   91 (154)
T d5mdha1          81 DVAILVGSMPR   91 (154)
T ss_dssp             SEEEECCSCCC
T ss_pred             eEEEEecccCC
Confidence            99999999765

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=5.8e-06  Score=47.30  Aligned_cols=75  Identities=17%  Similarity=0.197  Sum_probs=49.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChH---HHHHhh--ccccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE---KIISIL--KEVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~--~~~d~vv~~a~   80 (104)
                      +..+|+|+||+|.+|...++.+...|.+|+++.+++++.+....... ..+.|+.+.+   .+.+..  .++|+|+.+.|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga-~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g  106 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA-HEVFNHREVNYIDKIKKYVGEKGIDIIIEMLA  106 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC-SEEEETTSTTHHHHHHHHHCTTCEEEEEESCH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccccccCc-ccccccccccHHHHhhhhhccCCceEEeeccc
Confidence            45689999999999999999998999999988887654422221111 1122444433   333333  24899999988


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus       107 ~  107 (174)
T d1yb5a2         107 N  107 (174)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.96  E-value=7e-06  Score=46.00  Aligned_cols=70  Identities=19%  Similarity=0.198  Sum_probs=44.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc----cccc-cccc-c-cccccChHHHHHhhccccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR----TSKL-EIHK-E-FQELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~----~~~~-~~~~-~-~~d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      +||.|+|+ |++|..++..|+.++  .++.++++++...+.    ..+. .... . .....+    .+.++++|+|+.+
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d----~~~l~~adiVVit   76 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND----WAALADADVVIST   76 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC----GGGGTTCSEEEEC
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC----HHHhccccEEEEe
Confidence            68999996 999999999998877  378888877544310    0000 0000 0 001112    2347899999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      +|.+
T Consensus        77 aG~~   80 (146)
T d1hyha1          77 LGNI   80 (146)
T ss_dssp             CSCG
T ss_pred             cccc
Confidence            9964

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.96  E-value=6.9e-06  Score=45.83  Aligned_cols=71  Identities=11%  Similarity=0.105  Sum_probs=45.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCccc----ccc----cccccccccccChHHHHHhhccccEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSR----TSK----LEIHKEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~----~~~----~~~~~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      |||.|+|+ |.+|.+++..|..++  .++.+++++++....    ..+    ......+..-.|    .+.++++|+|+.
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d----~~~~~~adiVvi   75 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGAD----YSLLKGSEIIVV   75 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESC----GGGGTTCSEEEE
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCC----HHHhccccEEEE
Confidence            58999997 999999999998777  368888877644310    000    000010111111    246789999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      .+|.+.
T Consensus        76 tag~~~   81 (142)
T d1ojua1          76 TAGLAR   81 (142)
T ss_dssp             CCCCCC
T ss_pred             eccccC
Confidence            999755

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.96  E-value=9.3e-06  Score=45.30  Aligned_cols=70  Identities=16%  Similarity=0.173  Sum_probs=43.7

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCCCCc--c----cccc---cccccccccccChHHHHHhhccccEEEE
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH--NTFVYARPVTEN--S----RTSK---LEIHKEFQELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~~~~--~----~~~~---~~~~~~~~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      ||.|+|++|.+|+.++..|..++.  ++.+++......  .    +..+   ......+. ..+.    +.++++|+|+.
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~-~~~~----~~~~~aDiVvi   76 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVR-QGGY----EDTAGSDVVVI   76 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEE-ECCG----GGGTTCSEEEE
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEe-eCCH----HHhhhcCEEEE
Confidence            799999889999999999998874  688877542211  0    0000   00000011 1121    23679999999


Q ss_pred             cccCcC
Q 046878           78 TVAYPQ   83 (104)
Q Consensus        78 ~a~~~~   83 (104)
                      ++|.+.
T Consensus        77 taG~~~   82 (142)
T d1o6za1          77 TAGIPR   82 (142)
T ss_dssp             CCCCCC
T ss_pred             eccccc
Confidence            999765

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.94  E-value=4.2e-05  Score=41.84  Aligned_cols=40  Identities=15%  Similarity=0.062  Sum_probs=31.4

Q ss_pred             CCCCCeEEEEccC---ChhhHHHHHHHHhCC-CeEEEEEcCCCC
Q 046878            4 ENTKPKILIFGGT---GYLGKYMVKASVSSG-HNTFVYARPVTE   43 (104)
Q Consensus         4 ~~~~~~i~i~Ga~---G~iG~~l~~~l~~~~-~~v~~~~r~~~~   43 (104)
                      -+.+++|.|+|++   +..|..+.+.|.+.+ ++|+.+.-+...
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~   48 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEE   48 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSE
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccc
Confidence            3567899999998   889999999998766 588887655433

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.94  E-value=2.8e-05  Score=43.22  Aligned_cols=73  Identities=14%  Similarity=0.201  Sum_probs=44.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccccccccc--cccc----ccccChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLEI--HKEF----QELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~~--~~~~----~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      +||.|+|+ |.+|.+++..|...+ .++.+++.+++.... ...+.  ...+    ..+...+. .+.+.++|+||.++|
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~-~~~Dl~~~~~~~~~~~~i~~~~d-~~~~~~advvvitag   78 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQG-KALDLYEASPIEGFDVRVTGTNN-YADTANSDVIVVTSG   78 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHH-HHHHHHTTHHHHTCCCCEEEESC-GGGGTTCSEEEECCS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchh-HHHHhhccccccCCCCEEEecCc-HHHhcCCCEEEEeee
Confidence            58999997 999999999888776 478888876644311 00010  0000    00110011 234678999999999


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      .+.
T Consensus        79 ~~~   81 (142)
T d1uxja1          79 APR   81 (142)
T ss_dssp             CC-
T ss_pred             ccC
Confidence            764

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.93  E-value=6.2e-06  Score=47.38  Aligned_cols=74  Identities=20%  Similarity=0.274  Sum_probs=49.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccCh---HHHHHhh--ccccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEH---EKIISIL--KEVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~--~~~d~vv~~a~~   81 (104)
                      ..+++|.||+|.+|...++.+...|.++.++.+++++.+....... ..+.++.++   +.+.+..  .++|++|.+.|.
T Consensus        26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga-~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~  104 (183)
T d1pqwa_          26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV-EYVGDSRSVDFADEILELTDGYGVDVVLNSLAG  104 (183)
T ss_dssp             TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC-SEEEETTCSTHHHHHHHHTTTCCEEEEEECCCT
T ss_pred             CCEEEEECCCCCcccccchhhccccccceeeecccccccccccccc-cccccCCccCHHHHHHHHhCCCCEEEEEecccc
Confidence            4689999999999999999888889999988887655432222111 111233332   3333333  358999999985

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.92  E-value=1.4e-05  Score=42.82  Aligned_cols=36  Identities=19%  Similarity=0.365  Sum_probs=32.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      +++++|+|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence            478999997 999999999999999999999988743

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=97.89  E-value=3.7e-05  Score=43.48  Aligned_cols=74  Identities=14%  Similarity=0.205  Sum_probs=40.0

Q ss_pred             CCeEEEEccCChhhHHHH-HHHHhCC-CeEEEE-EcCCCCcccccccccccccccccChHHHHHh--hccccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMV-KASVSSG-HNTFVY-ARPVTENSRTSKLEIHKEFQELDEHEKIISI--LKEVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~-~~l~~~~-~~v~~~-~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~--~~~~d~vv~~a~~   81 (104)
                      +.++.|+| +|.+|+.+. +.|.... .++..+ +|++.... ....+...........+.+.+.  +.++|+||.+.+.
T Consensus         4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~-~~~a~~~~i~~~~~~~d~l~~~~~~~~iDiVf~ATpa   81 (157)
T d1nvmb1           4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDG-LARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSA   81 (157)
T ss_dssp             CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHH-HHHHHHTTCCEESSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred             CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccc-hhhhhhcCCcccccceeeeeecccccccCEEEEcCCc
Confidence            45899999 699998654 5554443 356555 45543220 0111111100123334555443  4579999998775


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus        82 g   82 (157)
T d1nvmb1          82 S   82 (157)
T ss_dssp             H
T ss_pred             h
Confidence            4

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.88  E-value=5.6e-06  Score=47.44  Aligned_cols=76  Identities=16%  Similarity=0.175  Sum_probs=51.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChH---HHHHhh--ccccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHE---KIISIL--KEVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~--~~~d~vv~~a~   80 (104)
                      +..+|+|+||+|.+|...++.+...|.+|+++++++++.+....... ....|+.+++   .+.++-  .++|+|+.+.+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa-~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g  106 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA-WQVINYREEDLVERLKEITGGKKVRVVYDSVG  106 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCC-eEEEECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence            34689999999999999999988889999999999876533222221 1112444432   333332  24799999998


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus       107 ~~  108 (179)
T d1qora2         107 RD  108 (179)
T ss_dssp             GG
T ss_pred             HH
Confidence            64

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.86  E-value=6e-06  Score=46.49  Aligned_cols=75  Identities=19%  Similarity=0.266  Sum_probs=45.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccc--cccccc--cccC-hHHHHHhhccccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLE--IHKEFQ--ELDE-HEKIISILKEVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~--~~~~~~--d~~~-~~~~~~~~~~~d~vv~~a~   80 (104)
                      +.||.|+|+ |.+|+.++..|...+ .++.+++++++.... ...+  +...+.  +... .....+.++++|+|+.++|
T Consensus         3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g-~a~Dl~~~~~~~~~~~~v~~~~~~~~~~~advvvitag   80 (150)
T d1t2da1           3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHG-KALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTAG   80 (150)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHH-HHHHHHTHHHHHTCCCCEEEECCGGGGTTCSEEEECCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCccee-eecchhhhccccCCCcEEEecccccccCCCcEEEEecc
Confidence            358999996 999999998777766 478888887654311 0000  000000  0000 0111345789999999999


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      .+.
T Consensus        81 ~~~   83 (150)
T d1t2da1          81 FTK   83 (150)
T ss_dssp             CSS
T ss_pred             ccc
Confidence            653

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.85  E-value=2.3e-05  Score=44.48  Aligned_cols=75  Identities=19%  Similarity=0.196  Sum_probs=49.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccccc---ccccChHHHHHhh-----ccccEEEEc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEF---QELDEHEKIISIL-----KEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~---~d~~~~~~~~~~~-----~~~d~vv~~   78 (104)
                      ..+++|+|+ |.+|...+..+...|.+|+++++++.+.+..........+   ....+.+.+.+.+     .++|+||.+
T Consensus        27 g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~  105 (170)
T d1e3ja2          27 GTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDC  105 (170)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTCSEEEECCTTTSCHHHHHHHHHHHSSSCCSEEEEC
T ss_pred             CCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHHHcCCcEEEeccccccccchhhhhhhcccccCCceeeec
Confidence            468999985 9999999998888899999999887665322222111101   1222333333333     358999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      +|..
T Consensus       106 ~g~~  109 (170)
T d1e3ja2         106 SGNE  109 (170)
T ss_dssp             SCCH
T ss_pred             CCCh
Confidence            9875

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=97.83  E-value=6.9e-05  Score=40.23  Aligned_cols=33  Identities=21%  Similarity=0.358  Sum_probs=28.1

Q ss_pred             CeEEEEccC---ChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            8 PKILIFGGT---GYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         8 ~~i~i~Ga~---G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      ++|.|+|++   +..|..+.+.|++.|++|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            589999986   678999999999999998877544

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.83  E-value=3.1e-05  Score=41.91  Aligned_cols=37  Identities=22%  Similarity=0.249  Sum_probs=33.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +++++|+|+ |++|..++..|.+.|.+|+++.+++.-.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~l   59 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQIG   59 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccccc
Confidence            479999997 9999999999999999999999877433

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=1.6e-05  Score=39.81  Aligned_cols=39  Identities=15%  Similarity=0.204  Sum_probs=34.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +..+++|.|++|.+|...++.+...|.+|+++++++++.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~   69 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            346899999999999999998888999999999987655

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.81  E-value=7.6e-05  Score=41.31  Aligned_cols=35  Identities=14%  Similarity=0.179  Sum_probs=29.9

Q ss_pred             CCeEEEEccC---ChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            7 KPKILIFGGT---GYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~---G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .++|+|+|++   +..|..+++.|.+.|++|+.+.-+.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~   56 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY   56 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcc
Confidence            4789999987   6799999999999999988876543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.81  E-value=3.3e-05  Score=41.77  Aligned_cols=35  Identities=20%  Similarity=0.273  Sum_probs=31.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .+++++|+|| |++|.+++..|.+.|.+|+++.|++
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            3468999997 9999999999999999999998753

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=1.9e-05  Score=44.94  Aligned_cols=70  Identities=16%  Similarity=0.101  Sum_probs=50.1

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+| .|++|+.+++.+...|.+|.+...+|-..     .+..   -|-.....+.+++...|+++.+.|...
T Consensus        22 l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a-----l~A~---~dG~~v~~~~~a~~~adivvtaTGn~~   91 (163)
T d1li4a1          22 IAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA-----LQAA---MEGYEVTTMDEACQEGNIFVTTTGCID   91 (163)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH-----HHHH---HTTCEECCHHHHTTTCSEEEECSSCSC
T ss_pred             ecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchh-----HHhh---cCceEeeehhhhhhhccEEEecCCCcc
Confidence            4568999999 59999999999999999999998876322     1100   011222235667778888888888654

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=97.80  E-value=3.1e-05  Score=41.83  Aligned_cols=36  Identities=19%  Similarity=0.391  Sum_probs=32.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      .++++|+|+ |++|.+++..|.+.|.+|+++.+.+.-
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            478999997 999999999999999999999988743

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.79  E-value=3.5e-05  Score=38.54  Aligned_cols=36  Identities=17%  Similarity=0.332  Sum_probs=31.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ++|.|+|+ |.+|+-++..-...|+++.+++-++...
T Consensus         2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            58999996 9999999999999999999998765444

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=97.78  E-value=4.9e-05  Score=40.86  Aligned_cols=37  Identities=16%  Similarity=0.120  Sum_probs=32.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      .+++++|+|+ |++|-.++..|...|.+|+++.+++.-
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            3478999997 999999999999999999999988643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.77  E-value=1.5e-06  Score=50.11  Aligned_cols=38  Identities=18%  Similarity=0.302  Sum_probs=31.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+.++++|+|+ |..+++++..|...+ +++++.|+.++.
T Consensus        16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka   53 (177)
T d1nvta1          16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKA   53 (177)
T ss_dssp             CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHH
Confidence            56789999996 999999999997665 899999986554

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=97.77  E-value=8.7e-05  Score=42.25  Aligned_cols=37  Identities=19%  Similarity=0.231  Sum_probs=31.9

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ...+++.|+|.+..+|+.++..|.++|..|+.+.+..
T Consensus        35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t   71 (166)
T d1b0aa1          35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT   71 (166)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred             cccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence            4568999999999999999999999999988776554

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=97.76  E-value=3.2e-05  Score=45.82  Aligned_cols=34  Identities=18%  Similarity=0.410  Sum_probs=31.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .++|+|+|| |..|...+..|.++|++|.++.|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            468999997 9999999999999999999999864

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.76  E-value=1.8e-05  Score=43.13  Aligned_cols=70  Identities=11%  Similarity=0.100  Sum_probs=49.8

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHh-hccccEEEEcccC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISI-LKEVGVVISTVAY   81 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vv~~a~~   81 (104)
                      .++|+|. |.+|+.+++.|.  ++++.++..++...+........-...|..+++.|.++ +.+++.++.+...
T Consensus         2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~   72 (129)
T d2fy8a1           2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVNLES   72 (129)
T ss_dssp             CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSS
T ss_pred             EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCccccccccCCHHHHHHhhhhcCcEEEEeccc
Confidence            5788996 999999999984  46778888776654222211111122489999999887 7889999987764

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.76  E-value=3.1e-05  Score=48.45  Aligned_cols=34  Identities=18%  Similarity=0.018  Sum_probs=28.8

Q ss_pred             CeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIFGG--TGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +..+|||+  +..||.++++.|.++|.+|.+..++.
T Consensus         3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~   38 (329)
T d1uh5a_           3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP   38 (329)
T ss_dssp             CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGG
T ss_pred             cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCch
Confidence            56799994  45899999999999999999887653

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=2.8e-05  Score=41.63  Aligned_cols=36  Identities=17%  Similarity=0.313  Sum_probs=32.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      +++++|+|+ |++|..++..|.+.|.+|+++.|.+.-
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence            468999997 999999999999999999999998644

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=97.74  E-value=2.9e-05  Score=41.74  Aligned_cols=35  Identities=26%  Similarity=0.498  Sum_probs=31.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +++++|+|| |++|.+++..|...|.+|+++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            468999997 99999999999999999999998764

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.73  E-value=0.00011  Score=42.03  Aligned_cols=79  Identities=11%  Similarity=0.145  Sum_probs=52.7

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccc---cccccc--cChHHHHHhhccccEEEEc
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIH---KEFQEL--DEHEKIISILKEVGVVIST   78 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~---~~~~d~--~~~~~~~~~~~~~d~vv~~   78 (104)
                      ....+++.|+|.+.-+|+.++..|.++|..|+.+.+..... ........   ....++  ...+.+.+....+|+|+..
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsa  104 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQK-FTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITG  104 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEE-EESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccc-cccccceeeeeeccccccccchhHHhhccccCCEEEEc
Confidence            45678999999988999999999999998888776543221 00000000   001122  2345677778899999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      +|.+.
T Consensus       105 vG~p~  109 (171)
T d1edza1         105 VPSEN  109 (171)
T ss_dssp             CCCTT
T ss_pred             cCCCc
Confidence            98754

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.72  E-value=5.6e-05  Score=43.34  Aligned_cols=76  Identities=18%  Similarity=0.232  Sum_probs=48.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccccccccccccc--ChHH----HHHhh--ccccEEE
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELD--EHEK----IISIL--KEVGVVI   76 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~--~~~~----~~~~~--~~~d~vv   76 (104)
                      +..+++|+|+ |.+|...+..+...|. +|+++++++++.+......... ..+..  +..+    +.+..  .++|+||
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~-vi~~~~~~~~~~~~~i~~~~~~~g~Dvvi  105 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADL-TLNRRETSVEERRKAIMDITHGRGADFIL  105 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSE-EEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred             CCCEEEEECC-CccchhheecccccccccccccccccccccccccccceE-EEeccccchHHHHHHHHHhhCCCCceEEe
Confidence            3468999997 9999999999988896 7899998876653222221111 11222  2222    22222  2589999


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      .++|...
T Consensus       106 d~vG~~~  112 (182)
T d1vj0a2         106 EATGDSR  112 (182)
T ss_dssp             ECSSCTT
T ss_pred             ecCCchh
Confidence            9998754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.72  E-value=4.6e-05  Score=40.65  Aligned_cols=36  Identities=22%  Similarity=0.311  Sum_probs=32.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      +++++|+|| |++|..++..|.+.|.+|+++.+.+.-
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeeccc
Confidence            478999997 999999999999999999999887643

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=97.72  E-value=0.00011  Score=38.14  Aligned_cols=82  Identities=15%  Similarity=0.018  Sum_probs=49.6

Q ss_pred             CCeEEEEccCChhh-HHHHHHHHhCCCeEEEEEcCCCCccccccccccc-ccccccChHHHHHhhccccEEEEcccCcCh
Q 046878            7 KPKILIFGGTGYLG-KYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK-EFQELDEHEKIISILKEVGVVISTVAYPQL   84 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG-~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~   84 (104)
                      .+++.++|- |.+| +++|+.|.++|++|.+.++.....  ...+.... .+..-.+++    .+.+.|.||...+.+.-
T Consensus         8 ~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~--~~~L~~~Gi~v~~g~~~~----~i~~~d~vV~S~AI~~~   80 (96)
T d1p3da1           8 VQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVV--TQRLAQAGAKIYIGHAEE----HIEGASVVVVSSAIKDD   80 (96)
T ss_dssp             CCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHH--HHHHHHTTCEEEESCCGG----GGTTCSEEEECTTSCTT
T ss_pred             CCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChh--hhHHHHCCCeEEECCccc----cCCCCCEEEECCCcCCC
Confidence            468999997 6777 567899999999999998875332  11111111 011111222    24678999998887641


Q ss_pred             hhHHHHHHHHHHhC
Q 046878           85 LDQLKIVDAIKVAG   98 (104)
Q Consensus        85 ~~~~~l~~~~~~~~   98 (104)
                         ..-+.++++.+
T Consensus        81 ---npel~~A~~~g   91 (96)
T d1p3da1          81 ---NPELVTSKQKR   91 (96)
T ss_dssp             ---CHHHHHHHHTT
T ss_pred             ---CHHHHHHHHcC
Confidence               23344566665

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=97.70  E-value=5e-05  Score=41.05  Aligned_cols=35  Identities=20%  Similarity=0.336  Sum_probs=31.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      .++++|+|+ |++|..++..|.+.|.+|+++.+.+.
T Consensus        30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            468999997 99999999999999999999988764

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.67  E-value=5.8e-05  Score=43.50  Aligned_cols=88  Identities=11%  Similarity=0.098  Sum_probs=49.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCcccccccc---cc----c---ccc--cccChHHHHHhhcccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSRTSKLE---IH----K---EFQ--ELDEHEKIISILKEVG   73 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~~~~~~---~~----~---~~~--d~~~~~~~~~~~~~~d   73 (104)
                      |.||.|.|- |.||+.+++.+.+++ .+++.+....+.........   ..    .   .+.  .+.....+...+.++|
T Consensus         1 MIKVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD   79 (178)
T d1b7go1           1 MVNVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD   79 (178)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred             CeEEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence            348999994 999999999999865 57776654433221000000   00    0   000  1111223455567899


Q ss_pred             EEEEcccCcChhhHHHHHHHHHHhC
Q 046878           74 VVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        74 ~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      +|+-|.|...  . ..-++...+++
T Consensus        80 iViecTG~f~--~-~e~a~~hl~~G  101 (178)
T d1b7go1          80 IVVDTTPNGV--G-AQYKPIYLQLQ  101 (178)
T ss_dssp             EEEECCSTTH--H-HHHHHHHHHTT
T ss_pred             EEEECCCCcC--C-HHHHHHHHHcC
Confidence            9999999742  2 23344444555

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=97.66  E-value=4.3e-05  Score=40.32  Aligned_cols=39  Identities=10%  Similarity=0.118  Sum_probs=31.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+.++|+|+|+ |..|.-++..|...+..++...|++...
T Consensus        30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~~~   68 (107)
T d2gv8a2          30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGGGD   68 (107)
T ss_dssp             GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTCCS
T ss_pred             cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCccc
Confidence            35689999996 9999999999998776766667765544

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.66  E-value=1.8e-05  Score=45.96  Aligned_cols=35  Identities=20%  Similarity=0.187  Sum_probs=28.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |||.|+|. |++|..++..+ +.|++|++++.++...
T Consensus         1 MkI~ViGl-G~vGl~~a~~~-a~g~~V~g~Din~~~v   35 (196)
T d1dlja2           1 MKIAVAGS-GYVGLSLGVLL-SLQNEVTIVDILPSKV   35 (196)
T ss_dssp             CEEEEECC-SHHHHHHHHHH-TTTSEEEEECSCHHHH
T ss_pred             CEEEEECC-ChhHHHHHHHH-HCCCcEEEEECCHHHH
Confidence            58999995 99999998645 6799999999876543

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=97.66  E-value=1.7e-05  Score=45.98  Aligned_cols=37  Identities=16%  Similarity=0.195  Sum_probs=33.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .++|.|+|+ |.+|+.++..++.+|++|++++++++..
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l   40 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGI   40 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence            358999997 9999999999999999999999987544

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.65  E-value=8.9e-06  Score=46.51  Aligned_cols=39  Identities=21%  Similarity=0.240  Sum_probs=34.2

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENS   45 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~   45 (104)
                      ..+|+|.||+|.+|...++.....|.+|+.+.+++++.+
T Consensus        24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~   62 (167)
T d1tt7a2          24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAAD   62 (167)
T ss_dssp             GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHH
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHH
Confidence            347999999999999999988888999999999887653

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.65  E-value=4.1e-05  Score=43.83  Aligned_cols=76  Identities=9%  Similarity=0.115  Sum_probs=49.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccC---hHHHHHhhc--cccEEEEcc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDE---HEKIISILK--EVGVVISTV   79 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~--~~d~vv~~a   79 (104)
                      +..+++|+|+ |.+|...++.+...|. +|+++++++++.+...+.... ...++.+   .+.+.+...  ++|+||.++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~-~~i~~~~~~~~~~v~~~t~g~G~D~vid~~  104 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGAT-DILNYKNGHIEDQVMKLTNGKGVDRVIMAG  104 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCS-EEECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCcc-ccccccchhHHHHHHHHhhccCcceEEEcc
Confidence            3468999997 9999999998888886 688888887655332222211 1113332   233444432  489999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      |...
T Consensus       105 g~~~  108 (174)
T d1jqba2         105 GGSE  108 (174)
T ss_dssp             SCTT
T ss_pred             CCHH
Confidence            9764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=0.00021  Score=40.77  Aligned_cols=40  Identities=8%  Similarity=0.032  Sum_probs=34.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      ...+++.|+|.+..+|+.++..|.++|..|+.+.+.....
T Consensus        37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             cccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            4568999999999999999999999999999887765443

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=97.64  E-value=4.8e-05  Score=47.29  Aligned_cols=35  Identities=26%  Similarity=0.470  Sum_probs=31.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +++|+|+|| |..|...|..|.+.|++|.++.+++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            579999997 99999999999999999999988763

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=97.63  E-value=3e-05  Score=44.38  Aligned_cols=77  Identities=16%  Similarity=0.109  Sum_probs=45.8

Q ss_pred             CCeEEEEccCChhhHHH--HHHHHhC----CCeEEEEEcCCCCcccc----cc-cccccccccccChHHHHHhhccccEE
Q 046878            7 KPKILIFGGTGYLGKYM--VKASVSS----GHNTFVYARPVTENSRT----SK-LEIHKEFQELDEHEKIISILKEVGVV   75 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l--~~~l~~~----~~~v~~~~r~~~~~~~~----~~-~~~~~~~~d~~~~~~~~~~~~~~d~v   75 (104)
                      .+||.|+|| |.+|..+  ...|+..    +.++.+++.++++.+..    .+ .........+....+..++++++|+|
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V   80 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV   80 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence            369999997 9998753  3344432    35899999986554210    00 00000001222233457788999999


Q ss_pred             EEcccCcCh
Q 046878           76 ISTVAYPQL   84 (104)
Q Consensus        76 v~~a~~~~~   84 (104)
                      +++++....
T Consensus        81 v~~~~~g~~   89 (171)
T d1obba1          81 INTAMVGGH   89 (171)
T ss_dssp             EECCCTTHH
T ss_pred             eeecccccc
Confidence            999887653

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=97.63  E-value=4.8e-05  Score=41.02  Aligned_cols=34  Identities=21%  Similarity=0.414  Sum_probs=31.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ++++|+|| |++|-.++..|...|.+|+++.+.+.
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            57999997 99999999999999999999988764

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.62  E-value=0.00012  Score=40.29  Aligned_cols=73  Identities=14%  Similarity=0.184  Sum_probs=42.1

Q ss_pred             eEEEEccCChhhHHHHHHHHhC-CCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-----ccccEEEEcccCc
Q 046878            9 KILIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-----KEVGVVISTVAYP   82 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~d~vv~~a~~~   82 (104)
                      ||.|.|++|.+|+.+++.+.+. ++++............. .......+.|++.|+...+.+     .+.-+|+-..|..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~-~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~   79 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLL-TDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFT   79 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHH-HTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhh-ccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccc
Confidence            6899999999999999988764 46655433222111000 001111223677766554443     3567777666654

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=9.9e-05  Score=39.93  Aligned_cols=36  Identities=22%  Similarity=0.279  Sum_probs=32.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      +++++|+|+ |++|..++..|...|.+|+++.|++.-
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecccc
Confidence            468999997 999999999999999999999998643

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=9.2e-05  Score=41.97  Aligned_cols=75  Identities=16%  Similarity=0.193  Sum_probs=48.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccccccccc-ccccChHHHHHhh-----ccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEF-QELDEHEKIISIL-----KEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~-~d~~~~~~~~~~~-----~~~d~vv~~a   79 (104)
                      ..+++|+|+ |.+|...+..+...|. +|+++++++.+.+...+....... .+-.++....+.+     .++|+||.++
T Consensus        27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~  105 (171)
T d1pl8a2          27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT  105 (171)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred             CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccccccccccccccccccCCCCceEEEecc
Confidence            468999997 9999999999988887 788888887665322222111100 1222333333333     2579999999


Q ss_pred             cCc
Q 046878           80 AYP   82 (104)
Q Consensus        80 ~~~   82 (104)
                      |..
T Consensus       106 G~~  108 (171)
T d1pl8a2         106 GAE  108 (171)
T ss_dssp             CCH
T ss_pred             CCc
Confidence            974

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=97.60  E-value=8.2e-05  Score=42.67  Aligned_cols=72  Identities=15%  Similarity=0.068  Sum_probs=39.2

Q ss_pred             CCCCeEEEEccCChhhHH-HHHHHHhCC--CeEEEEE-cCCCCcccccccccccccccccChHHHHHhh--ccccEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKY-MVKASVSSG--HNTFVYA-RPVTENSRTSKLEIHKEFQELDEHEKIISIL--KEVGVVIST   78 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~-l~~~l~~~~--~~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vv~~   78 (104)
                      |++.+++|+|+ |.+|+. .+..+.+.+  .++.++. ++++..+..  ........-+.+.   .+.+  .++|+|+.+
T Consensus         1 MkkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~--~~~~~~~~~~~~~---~ell~~~~id~v~I~   74 (181)
T d1zh8a1           1 LRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEF--AKMVGNPAVFDSY---EELLESGLVDAVDLT   74 (181)
T ss_dssp             CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHH--HHHHSSCEEESCH---HHHHHSSCCSEEEEC
T ss_pred             CCCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhh--hccccccceeeee---eccccccccceeecc
Confidence            55568999996 999986 466666543  3566544 433222110  0111100123343   3444  368999988


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      .+..
T Consensus        75 tp~~   78 (181)
T d1zh8a1          75 LPVE   78 (181)
T ss_dssp             CCGG
T ss_pred             cccc
Confidence            8764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=97.60  E-value=7e-05  Score=41.03  Aligned_cols=37  Identities=14%  Similarity=0.441  Sum_probs=33.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      ..++++|+|+ |++|..++..|...|.+|+++.+.+.-
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            3578999997 999999999999999999999987653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=97.57  E-value=7.3e-05  Score=40.39  Aligned_cols=37  Identities=22%  Similarity=0.253  Sum_probs=33.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +++++|+|+ |++|..++..|.+.|.+|+++.|++.-.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l   61 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIV   61 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccC
Confidence            468999997 9999999999999999999999987544

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=97.55  E-value=0.0001  Score=39.96  Aligned_cols=37  Identities=27%  Similarity=0.221  Sum_probs=32.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +++++|+|+ |++|..++..+...|.+|+++.+.+.-.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~il   62 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGLM   62 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecccc
Confidence            468999997 9999999999999999999999876443

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=97.55  E-value=0.00012  Score=42.22  Aligned_cols=76  Identities=17%  Similarity=0.304  Sum_probs=52.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccc--ccc-------cc-----------ccc--cChH
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLE--IHK-------EF-----------QEL--DEHE   63 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~--~~~-------~~-----------~d~--~~~~   63 (104)
                      .+-+++|+|+ |-.|..-++.....|..|++++.++...+..+...  .+.       ..           .++  ...+
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            3468999997 99999999999999999999999887653221110  000       00           011  2245


Q ss_pred             HHHHhhccccEEEEcccCc
Q 046878           64 KIISILKEVGVVISTVAYP   82 (104)
Q Consensus        64 ~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+.+.+.++|+||.++-.+
T Consensus       107 ~l~~~l~~aDlVI~talip  125 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIP  125 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCT
T ss_pred             HHHHHHHhhhhheeeeecC
Confidence            6777788999999988654

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.52  E-value=1.5e-05  Score=45.25  Aligned_cols=75  Identities=9%  Similarity=0.017  Sum_probs=43.1

Q ss_pred             CeEEEEccCChhhHHHHHHHH-h--C---CCeEEEEEcCCCCccccccc-cccccc-ccccChHHHHHhhccccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASV-S--S---GHNTFVYARPVTENSRTSKL-EIHKEF-QELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~-~--~---~~~v~~~~r~~~~~~~~~~~-~~~~~~-~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      +||.|+|| |.+|...+...+ .  .   ..++.+.+.++++....... ...... ....-.....+.++++|+||.++
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita   79 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF   79 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEec
Confidence            48999998 888877765432 2  1   24788888876544210000 000000 01111123467789999999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      +.+.
T Consensus        80 ~~~~   83 (162)
T d1up7a1          80 RPGG   83 (162)
T ss_dssp             CTTH
T ss_pred             ccCC
Confidence            9764

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=97.51  E-value=8e-05  Score=42.22  Aligned_cols=70  Identities=13%  Similarity=0.080  Sum_probs=51.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +..++++|+|- |++|+-+++.+...|..|+++..+|-..  .+  -..    |=..--.+.++++..|++|.+.|...
T Consensus        21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a--lq--A~m----dGf~v~~~~~a~~~aDi~vTaTGn~~   90 (163)
T d1v8ba1          21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA--IQ--AVM----EGFNVVTLDEIVDKGDFFITCTGNVD   90 (163)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH--HH--HHT----TTCEECCHHHHTTTCSEEEECCSSSS
T ss_pred             ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh--HH--HHh----cCCccCchhHccccCcEEEEcCCCCc
Confidence            45689999997 9999999999999999999998887332  10  011    11122345677888999999998765

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=97.49  E-value=0.00012  Score=39.81  Aligned_cols=85  Identities=16%  Similarity=0.115  Sum_probs=49.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHh-CCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhc-cccEEEEcccCcChh
Q 046878            8 PKILIFGGTGYLGKYMVKASVS-SGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILK-EVGVVISTVAYPQLL   85 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vv~~a~~~~~~   85 (104)
                      .+++|.|| |..|+++++.+.. .++++.++..+.+... -....-.+    +..++.+.+... ..++++.+.+.   .
T Consensus         4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~-G~~I~Gi~----V~~~~~l~~~~~~~i~iai~~i~~---~   74 (126)
T d2dt5a2           4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKV-GRPVRGGV----IEHVDLLPQRVPGRIEIALLTVPR---E   74 (126)
T ss_dssp             EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTT-TCEETTEE----EEEGGGHHHHSTTTCCEEEECSCH---H
T ss_pred             ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhc-CCEECCEE----EecHHHHHHHHhhcccEEEEeCCH---H
Confidence            47999997 9999999998753 4567665544433320 11111111    223344555443 45666666554   3


Q ss_pred             hHHHHHHHHHHhCCccc
Q 046878           86 DQLKIVDAIKVAGNIKV  102 (104)
Q Consensus        86 ~~~~l~~~~~~~~~v~~  102 (104)
                      ..+.+++.|.+.+ ++.
T Consensus        75 ~~~~I~d~l~~~g-Ik~   90 (126)
T d2dt5a2          75 AAQKAADLLVAAG-IKG   90 (126)
T ss_dssp             HHHHHHHHHHHHT-CCE
T ss_pred             HHHHHHHHHHHcC-CCE
Confidence            4467888888776 653

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=97.48  E-value=8.4e-05  Score=42.02  Aligned_cols=69  Identities=12%  Similarity=0.114  Sum_probs=37.8

Q ss_pred             CeEEEEccCChhhHH-HHHHHHhCC-CeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKY-MVKASVSSG-HNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~-l~~~l~~~~-~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      +|++|+|+ |.+|+. ....|...+ .++.++++++...... +......   -+.+.+++.+  .++|+|+.+.+..
T Consensus         2 irvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~---~~~~~~~ll~--~~iD~V~I~tp~~   73 (167)
T d1xeaa1           2 LKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSA---TCTDYRDVLQ--YGVDAVMIHAATD   73 (167)
T ss_dssp             EEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCC---CCSSTTGGGG--GCCSEEEECSCGG
T ss_pred             eEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhccccc---ccccHHHhcc--cccceeccccccc
Confidence            48999996 999976 456665553 4666666554333111 1111111   1233333222  3689999887764

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.47  E-value=3.9e-05  Score=43.09  Aligned_cols=33  Identities=21%  Similarity=0.245  Sum_probs=27.0

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      ||.++|- |.+|..++++|++.|+.+ +.+|++++
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~   34 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEK   34 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHH
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHH
Confidence            6999995 999999999999988755 56666544

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.46  E-value=0.00011  Score=42.02  Aligned_cols=36  Identities=14%  Similarity=0.173  Sum_probs=31.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~   43 (104)
                      ++||+|+|| |..|...+..|.+.|+ +|+++.+++.-
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            479999997 9999999999999998 59999887543

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.43  E-value=0.00017  Score=40.61  Aligned_cols=38  Identities=18%  Similarity=0.086  Sum_probs=32.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +..+++|.|+ |.+|...+..+...|.+|+++++++.+.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~   64 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL   64 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH
Confidence            3468999996 9999999988888899999999887655

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=97.43  E-value=0.00018  Score=41.11  Aligned_cols=76  Identities=13%  Similarity=0.144  Sum_probs=48.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccccccccccccc----ChHHHHHhh--ccccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELD----EHEKIISIL--KEVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~--~~~d~vv~~   78 (104)
                      ...+++|+|+ |.+|...+..+...|. .|++.++++++.+..........+ +..    ......+..  .++|++|.+
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i-~~~~~~~~~~~~~~~~~~~G~d~vie~  105 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL-NPRELDKPVQDVITELTAGGVDYSLDC  105 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE-CGGGCSSCHHHHHHHHHTSCBSEEEES
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCccc-CCccchhhhhhhHhhhhcCCCcEEEEe
Confidence            3468999996 9999999999999896 677778877665332222211111 111    122222222  468999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      +|...
T Consensus       106 ~G~~~  110 (174)
T d1e3ia2         106 AGTAQ  110 (174)
T ss_dssp             SCCHH
T ss_pred             cccch
Confidence            99753

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.43  E-value=0.00013  Score=41.29  Aligned_cols=75  Identities=16%  Similarity=0.127  Sum_probs=47.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccCh---HHHHHhh--ccccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEH---EKIISIL--KEVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~--~~~d~vv~~a~   80 (104)
                      ..+++|+|++|.+|...+..+...|. .|+++++++.+.+...+.... ...+..+.   +.+.+..  +.+|++|.++|
T Consensus        28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~-~~i~~~~~~~~~~~~~~~~~~~~d~vid~~g  106 (170)
T d1jvba2          28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD-YVINASMQDPLAEIRRITESKGVDAVIDLNN  106 (170)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCS-EEEETTTSCHHHHHHHHTTTSCEEEEEESCC
T ss_pred             CCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCc-eeeccCCcCHHHHHHHHhhcccchhhhcccc
Confidence            45899999989999999998888884 788888887655332222110 11123222   2222222  35899999998


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus       107 ~~  108 (170)
T d1jvba2         107 SE  108 (170)
T ss_dssp             CH
T ss_pred             cc
Confidence            63

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=97.42  E-value=0.00018  Score=38.42  Aligned_cols=36  Identities=14%  Similarity=0.139  Sum_probs=32.1

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      .++++|+|+ |++|..++..|...|.+++++.+++.-
T Consensus        22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchh
Confidence            468999997 999999999999999999999987643

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.40  E-value=0.00027  Score=40.35  Aligned_cols=91  Identities=14%  Similarity=0.218  Sum_probs=50.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccc--ccc--cccc----c---ccc--cccChHHHHHhhcccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSR--TSK--LEIH----K---EFQ--ELDEHEKIISILKEVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~--~~~--~~~~----~---~~~--d~~~~~~~~~~~~~~d   73 (104)
                      .||+|-|- |.||+.+++.+..+. .+++.+....+....  ...  ....    .   .+.  .+.....+.....++|
T Consensus         3 irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD   81 (172)
T d2czca2           3 VKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVD   81 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCS
T ss_pred             EEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhccCC
Confidence            58999995 999999999998754 466655432221100  000  0000    0   000  1111224455567899


Q ss_pred             EEEEcccCcChhhHHHHHHHHHHhCCcccC
Q 046878           74 VVISTVAYPQLLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        74 ~vv~~a~~~~~~~~~~l~~~~~~~~~v~~~  103 (104)
                      +|+=|+|...  . ..-++.-.+++ ++++
T Consensus        82 vViEcTG~f~--~-~~~~~~hl~~G-~k~V  107 (172)
T d2czca2          82 IIVDATPGGI--G-AKNKPLYEKAG-VKAI  107 (172)
T ss_dssp             EEEECCSTTH--H-HHHHHHHHHHT-CEEE
T ss_pred             EEEECCCCCC--C-HHHHHHHHHcC-CCEE
Confidence            9999999753  2 23333444566 6654

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.40  E-value=6.1e-05  Score=43.47  Aligned_cols=74  Identities=11%  Similarity=0.019  Sum_probs=43.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCcccccccccccccccccC---hHHHHHhh-ccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRTSKLEIHKEFQELDE---HEKIISIL-KEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~-~~~d~vv~~a~~   81 (104)
                      .+|+|.||+|.+|+..++.+...|.. |.++++++++.......--...+.|+.+   .+.+.+.. .++|+||.+.|.
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg  110 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGG  110 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEEEETTSSCHHHHHHHHCTTCEEEEEESSCH
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEEeeccchhHHHHHHHHhccCceEEEecCCc
Confidence            57999999999999999988888875 4444555433311110000111123433   22233322 358999999984

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=97.38  E-value=0.00013  Score=43.71  Aligned_cols=33  Identities=18%  Similarity=0.228  Sum_probs=30.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      |||+|+|| |.-|...+..|.++|++|.++.+++
T Consensus         2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            68999997 9999999999999999999998765

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.38  E-value=0.00022  Score=40.47  Aligned_cols=75  Identities=8%  Similarity=0.148  Sum_probs=47.5

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccC----hHHHHHhh--ccccEEEEcc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDE----HEKIISIL--KEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~--~~~d~vv~~a   79 (104)
                      ..+++|.|+ |.+|...+..+...|. .|+++++++++.+......... ..+..+    .+...+..  .++|++|.+.
T Consensus        29 GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~-~i~~~~~~~~~~~~~~~~~~~G~D~vid~~  106 (176)
T d2jhfa2          29 GSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATE-CVNPQDYKKPIQEVLTEMSNGGVDFSFEVI  106 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSE-EECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred             CCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCee-EEecCCchhHHHHHHHHHhcCCCCEEEecC
Confidence            468999998 7799999999888874 7888888877663222221111 112211    22222222  4689999999


Q ss_pred             cCcC
Q 046878           80 AYPQ   83 (104)
Q Consensus        80 ~~~~   83 (104)
                      |...
T Consensus       107 G~~~  110 (176)
T d2jhfa2         107 GRLD  110 (176)
T ss_dssp             CCHH
T ss_pred             Cchh
Confidence            9753

>d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Biliverdin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.38  E-value=0.00089  Score=37.81  Aligned_cols=73  Identities=12%  Similarity=0.076  Sum_probs=40.3

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCCCcccccccccccccccccChHHHHHhh--ccccEEE
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL--KEVGVVI   76 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~d~vv   76 (104)
                      |-.+..+.+|+|+|+ |++|+..++.|.+..  ..+.+++......  ........    ..+   +.+++  .++|+|+
T Consensus         1 ~~~~~~k~kv~iIG~-G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~~---~~e~l~~~~iD~V~   70 (172)
T d1lc0a1           1 MITNSGKFGVVVVGV-GRAGSVRLRDLKDPRSAAFLNLIGFVSRRE--LGSLDEVR----QIS---LEDALRSQEIDVAY   70 (172)
T ss_dssp             CCCCCCSEEEEEECC-SHHHHHHHHHHTSHHHHTTEEEEEEECSSC--CCEETTEE----BCC---HHHHHHCSSEEEEE
T ss_pred             CCCCCCCcEEEEEcC-CHHHHHHHHHHHhCCCCcEEEEEeccchHH--HHHhhccC----cCC---HHHHHhCCCcchhh
Confidence            444455679999996 999999888776532  2244443332211  01111111    112   33444  3689998


Q ss_pred             EcccCcC
Q 046878           77 STVAYPQ   83 (104)
Q Consensus        77 ~~a~~~~   83 (104)
                      .+.+...
T Consensus        71 I~tp~~~   77 (172)
T d1lc0a1          71 ICSESSS   77 (172)
T ss_dssp             ECSCGGG
T ss_pred             hcccccc
Confidence            8887643

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=97.37  E-value=0.00017  Score=42.87  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=31.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      .+||+|+|| |..|..++..|.++|++|+++.+++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            468999997 99999999999999999999998764

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=97.36  E-value=0.00025  Score=40.80  Aligned_cols=37  Identities=16%  Similarity=0.303  Sum_probs=33.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      ++++|+|+|| |-.|...+..|..+|++|+++.+.+.-
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            4579999997 999999999999999999999987643

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.34  E-value=0.00018  Score=39.93  Aligned_cols=34  Identities=21%  Similarity=0.349  Sum_probs=30.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      ++.++++|+|| |.+|..-++.|++.|.+|++++-
T Consensus        11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence            56789999997 99999999999999999998864

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=97.33  E-value=0.00016  Score=43.46  Aligned_cols=32  Identities=19%  Similarity=0.412  Sum_probs=29.5

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      -|+|+|| |.+|..++.+|.++|.+|.++.+..
T Consensus         6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            3999997 9999999999999999999999864

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=97.33  E-value=0.00014  Score=43.52  Aligned_cols=33  Identities=18%  Similarity=0.340  Sum_probs=30.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      |+|+|+|| |..|...+..|.++|++|+++.+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            47999997 9999999999999999999998865

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=97.32  E-value=0.0027  Score=37.76  Aligned_cols=34  Identities=26%  Similarity=0.263  Sum_probs=29.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~   40 (104)
                      +..+|+|+|+ |.+|.+++..|...|. ++++++.+
T Consensus        29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            3468999997 9999999999999996 78888765

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=97.31  E-value=0.00016  Score=44.03  Aligned_cols=35  Identities=20%  Similarity=0.317  Sum_probs=31.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .+++|+|+|| |..|...+..|.++|++|.++.+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999997 9999999999999999999998765

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=97.28  E-value=3.8e-06  Score=47.05  Aligned_cols=34  Identities=12%  Similarity=0.330  Sum_probs=23.1

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      |.++|+ |.+|+++++.|.+.++...+.+|++++.
T Consensus         2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~   35 (153)
T d2i76a2           2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRA   35 (153)
T ss_dssp             CEEESC-CHHHHHHHHTTC----CCCEECSSHHHH
T ss_pred             EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhh
Confidence            578995 9999999987765434445777876554

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=97.26  E-value=0.00042  Score=38.90  Aligned_cols=68  Identities=10%  Similarity=0.005  Sum_probs=38.0

Q ss_pred             CeEEEEccCChhhHH-HHHHHHhC-CCeEEEEE-cCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKY-MVKASVSS-GHNTFVYA-RPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~-l~~~l~~~-~~~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      ++++|+|+ |.+|+. .+..+... +.++.++. +++.......  .... ..-+++.   .++.+++|+|+.+.+..
T Consensus         2 iri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~--~~~~-~~~~~~~---~~l~~~~D~V~I~tp~~   72 (164)
T d1tlta1           2 LRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPIC--ESWR-IPYADSL---SSLAASCDAVFVHSSTA   72 (164)
T ss_dssp             EEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHH--HHHT-CCBCSSH---HHHHTTCSEEEECSCTT
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhh--hccc-ccccccc---hhhhhhcccccccccch
Confidence            58999996 999975 46666554 45665444 4443321110  0000 1112233   33457899999888764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.26  E-value=0.00025  Score=40.13  Aligned_cols=76  Identities=9%  Similarity=0.107  Sum_probs=45.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccccccccccccc----ChHHHHHhh--ccccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELD----EHEKIISIL--KEVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~--~~~d~vv~~   78 (104)
                      +..+++|.|+ |.+|...+..+...|. .|+++++++++.+......-.. ..++.    +.....+..  .++|+||.+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~-~i~~~~~~~~~~~~~~~~~~~g~D~vid~  105 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATE-CINPQDFSKPIQEVLIEMTDGGVDYSFEC  105 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSE-EECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcE-EEeCCchhhHHHHHHHHHcCCCCcEeeec
Confidence            3468999997 7899999998888885 5666666665542222211111 11221    222222222  468999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      .|...
T Consensus       106 ~G~~~  110 (176)
T d2fzwa2         106 IGNVK  110 (176)
T ss_dssp             SCCHH
T ss_pred             CCCHH
Confidence            98643

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=97.25  E-value=0.0034  Score=33.61  Aligned_cols=87  Identities=22%  Similarity=0.201  Sum_probs=55.2

Q ss_pred             CCeEEEEccCC----------hhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccChHHHHHhh--cccc
Q 046878            7 KPKILIFGGTG----------YLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKIISIL--KEVG   73 (104)
Q Consensus         7 ~~~i~i~Ga~G----------~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~--~~~d   73 (104)
                      .++++|+|+..          +.+.+.++.|.+.|+++.++..+|+.... ....+. .. .+....+.+.+.+  .++|
T Consensus         4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD~-lY-feplt~e~v~~Ii~~E~p~   81 (121)
T d1a9xa4           4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDR-LY-FEPVTLEDVLEIVRIEKPK   81 (121)
T ss_dssp             SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSSE-EE-CCCCSHHHHHHHHHHHCCS
T ss_pred             CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcCc-eE-EccCCHHHHHHHHHHhCCC
Confidence            46899999732          55778999999999999999998877621 111110 00 1334456666654  4678


Q ss_pred             EEEEcccCcChhhHHHHHHHHHHhC
Q 046878           74 VVISTVAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        74 ~vv~~a~~~~~~~~~~l~~~~~~~~   98 (104)
                      .|+-..|..   ...++...+.+.+
T Consensus        82 ~ii~~~GGQ---talnla~~L~~~g  103 (121)
T d1a9xa4          82 GVIVQYGGQ---TPLKLARALEAAG  103 (121)
T ss_dssp             EEECSSSTH---HHHTTHHHHHHTT
T ss_pred             EEEeehhhh---hHHHHHHHHHHcC
Confidence            777776642   2355666666665

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.0003  Score=42.59  Aligned_cols=34  Identities=21%  Similarity=0.254  Sum_probs=30.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ..||+|+|| |.-|...+..|.++|++|.++-.++
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            458999997 9999999999999999999997654

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.17  E-value=0.00042  Score=39.32  Aligned_cols=75  Identities=13%  Similarity=0.189  Sum_probs=45.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCe-EEEEEcCCCCcccccccccccccccccChH---HHHHhh-ccccEEEEccc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTENSRTSKLEIHKEFQELDEHE---KIISIL-KEVGVVISTVA   80 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~-v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~---~~~~~~-~~~d~vv~~a~   80 (104)
                      ...+++|+|+ |.+|...+..+...|.. +.++++++.+.+...+... ..+.|..+++   .+.+.. .++|+||.++|
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga-~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G  105 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-THVINSKTQDPVAAIKEITDGGVNFALESTG  105 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-SEEEETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC-eEEEeCCCcCHHHHHHHHcCCCCcEEEEcCC
Confidence            3468999997 99999999888888865 5566666654422222211 1112333322   222222 24899999998


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      ..
T Consensus       106 ~~  107 (174)
T d1f8fa2         106 SP  107 (174)
T ss_dssp             CH
T ss_pred             cH
Confidence            64

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.17  E-value=0.0011  Score=37.79  Aligned_cols=73  Identities=8%  Similarity=0.067  Sum_probs=40.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-CCeEEEE-EcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-GHNTFVY-ARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~~~v~~~-~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .|++|+|+ |.+|+..++.+... +.+++++ +++++..... ..........-+.+.+++.+. .++|+|+.+.+..
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-~~iD~v~I~tp~~   77 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHGSYESLLED-PEIDALYVPLPTS   77 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESSHHHHHHC-TTCCEEEECCCGG
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecCcHHHhhhc-cccceeeecccch
Confidence            48999996 99999999888765 4566654 4443222111 111110101123344443321 4689999887764

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.16  E-value=0.00045  Score=38.68  Aligned_cols=38  Identities=21%  Similarity=0.181  Sum_probs=31.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +..+++|.|+ |.+|...+..+...|.+|+++++++.+.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~   64 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL   64 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHh
Confidence            3468999986 9999999888888899999988877655

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.14  E-value=0.00046  Score=39.36  Aligned_cols=76  Identities=12%  Similarity=0.197  Sum_probs=50.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCccccccccccccc--ccccC-hHHHHHhh--ccccEEEEccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEF--QELDE-HEKIISIL--KEVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~--~d~~~-~~~~~~~~--~~~d~vv~~a~   80 (104)
                      ..+++|+|+ |.+|...+..+...|. +|+++++++++.+......-...+  .+-++ .+.+.+..  .++|+++.+.|
T Consensus        30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~~g  108 (176)
T d1d1ta2          30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIG  108 (176)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECGGGCSSCHHHHHHHHHTSCCCEEEECSC
T ss_pred             CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECccccchHHHHHHHHhccccceEEEEeCC
Confidence            458999997 9999999999999884 799999998776433222211111  12221 23333333  46899999999


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      ...
T Consensus       109 ~~~  111 (176)
T d1d1ta2         109 HLE  111 (176)
T ss_dssp             CHH
T ss_pred             chH
Confidence            753

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=97.13  E-value=0.00033  Score=39.14  Aligned_cols=34  Identities=18%  Similarity=0.198  Sum_probs=29.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH--NTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~~   41 (104)
                      .+||+|+|| |+.|..++..|.+.+.  +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            479999997 9999999999998875  678887665

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=97.11  E-value=0.00027  Score=43.44  Aligned_cols=34  Identities=15%  Similarity=0.240  Sum_probs=30.4

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ..++|+|| |..|..+|+.|.+.|++|.++.+++.
T Consensus         2 ~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~   35 (298)
T d1i8ta1           2 YDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH   35 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred             ccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence            36999997 99999999999999999999988753

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.11  E-value=0.0014  Score=33.25  Aligned_cols=81  Identities=19%  Similarity=0.099  Sum_probs=49.9

Q ss_pred             CeEEEEccCChhhH-HHHHHHHhCCCeEEEEEcCCCCccccccccccc-ccccccChHHHHHhhccccEEEEcccCcChh
Q 046878            8 PKILIFGGTGYLGK-YMVKASVSSGHNTFVYARPVTENSRTSKLEIHK-EFQELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~-~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      ++|-++|- |.+|. +|++.|.++|+.|.+.++.+...  ...++... .+.--.+++    .+.+.|.||...+.+.- 
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~--t~~L~~~Gi~i~~gh~~~----~i~~~d~vV~SsAI~~~-   73 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETER--TAYLRKLGIPIFVPHSAD----NWYDPDLVIKTPAVRDD-   73 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHH--HHHHHHTTCCEESSCCTT----SCCCCSEEEECTTCCTT-
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChh--HHHHHHCCCeEEeeeccc----ccCCCCEEEEecCcCCC-
Confidence            57888897 66665 78889999999999999875332  11111111 011001111    13578999999987642 


Q ss_pred             hHHHHHHHHHHhC
Q 046878           86 DQLKIVDAIKVAG   98 (104)
Q Consensus        86 ~~~~l~~~~~~~~   98 (104)
                        .+.+.++++.+
T Consensus        74 --npel~~A~~~g   84 (89)
T d1j6ua1          74 --NPEIVRARMER   84 (89)
T ss_dssp             --CHHHHHHHHTT
T ss_pred             --CHHHHHHHHcC
Confidence              34456666665

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=97.10  E-value=0.0007  Score=38.57  Aligned_cols=92  Identities=16%  Similarity=0.194  Sum_probs=50.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcCCCCccc-c-cc--cccccccc---------cccChHHHHHhhccc
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTENSR-T-SK--LEIHKEFQ---------ELDEHEKIISILKEV   72 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~~~~~~-~-~~--~~~~~~~~---------d~~~~~~~~~~~~~~   72 (104)
                      |++|.|-|- |.||+.+++.+..++ .++..+....+.... . ..  ........         .+.-..++..++.++
T Consensus         1 M~~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~v   79 (171)
T d1cf2o1           1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEA   79 (171)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTC
T ss_pred             CeEEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhhcCC
Confidence            458999995 999999999988765 466655543222110 0 00  00000000         111112344556789


Q ss_pred             cEEEEcccCcChhhHHHHHHHHHHhCCcccC
Q 046878           73 GVVISTVAYPQLLDQLKIVDAIKVAGNIKVF  103 (104)
Q Consensus        73 d~vv~~a~~~~~~~~~~l~~~~~~~~~v~~~  103 (104)
                      |+|+=|.|...  .... ++.-.+++ +|++
T Consensus        80 DvViEcTG~f~--~~~~-~~~hl~~G-~K~v  106 (171)
T d1cf2o1          80 DIVIDCTPEGI--GAKN-LKMYKEKG-IKAI  106 (171)
T ss_dssp             SEEEECCSTTH--HHHH-HHHHHHTT-CEEE
T ss_pred             CEEEEccCCCC--CHHH-HHHHHHcC-CCEE
Confidence            99999999853  2233 33334555 5543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=97.07  E-value=0.00033  Score=39.16  Aligned_cols=34  Identities=12%  Similarity=0.228  Sum_probs=27.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSS--GHNTFVYARP   40 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~   40 (104)
                      +++|.|+|+||.||+...+.+.+.  .++|.+++-.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~   37 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTAN   37 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEES
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeC
Confidence            578999999999999999988765  3677766554

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=97.07  E-value=0.00027  Score=40.17  Aligned_cols=77  Identities=14%  Similarity=0.155  Sum_probs=43.8

Q ss_pred             CeEEEEccCChhhHHHH-HHHHhC-C----CeEEEEEcCCCCcccc-ccccccc-c--cc-cccChHHHHHhhccccEEE
Q 046878            8 PKILIFGGTGYLGKYMV-KASVSS-G----HNTFVYARPVTENSRT-SKLEIHK-E--FQ-ELDEHEKIISILKEVGVVI   76 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~-~~l~~~-~----~~v~~~~r~~~~~~~~-~~~~~~~-~--~~-d~~~~~~~~~~~~~~d~vv   76 (104)
                      .||.|+|| |.+|...+ ..++.. .    .++.+.+.++++.+.. ...+... .  .. ...-..+..++++++|+||
T Consensus         4 ~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vv   82 (167)
T d1u8xx1           4 FSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM   82 (167)
T ss_dssp             EEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred             ceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEE
Confidence            48999998 77776533 344432 1    3688888876554210 0000000 0  00 1112234577889999999


Q ss_pred             EcccCcChh
Q 046878           77 STVAYPQLL   85 (104)
Q Consensus        77 ~~a~~~~~~   85 (104)
                      ++++.+...
T Consensus        83 itag~~~~~   91 (167)
T d1u8xx1          83 AHIRVGKYA   91 (167)
T ss_dssp             ECCCTTHHH
T ss_pred             ECCCcCCCC
Confidence            999986533

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=97.06  E-value=0.00088  Score=39.51  Aligned_cols=36  Identities=22%  Similarity=0.313  Sum_probs=32.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ..++|+|+|| |..|...+..|.+.|++|+++.+++.
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence            4579999997 99999999999999999999987653

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.04  E-value=0.00017  Score=41.10  Aligned_cols=74  Identities=12%  Similarity=0.057  Sum_probs=40.6

Q ss_pred             CeEEEEccCChhh--HHHHHHHHhCC----CeEEEEEcCCCCcccccccccc-----cc--c-ccccChHHHHHhhcccc
Q 046878            8 PKILIFGGTGYLG--KYMVKASVSSG----HNTFVYARPVTENSRTSKLEIH-----KE--F-QELDEHEKIISILKEVG   73 (104)
Q Consensus         8 ~~i~i~Ga~G~iG--~~l~~~l~~~~----~~v~~~~r~~~~~~~~~~~~~~-----~~--~-~d~~~~~~~~~~~~~~d   73 (104)
                      +||.|+|| |.+|  ..++..+....    .++.+++.++... ..+..+..     ..  . .......+..++++++|
T Consensus         2 ~KI~iIGa-Gs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~-~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaD   79 (169)
T d1s6ya1           2 LKIATIGG-GSSYTPELVEGLIKRYHELPVGELWLVDIPEGKE-KLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGAD   79 (169)
T ss_dssp             EEEEEETT-TCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHH-HHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCS
T ss_pred             cEEEEECC-ChhhHHHHHHHHHHhccccCCCEEEEEcCCccHH-HHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCC
Confidence            58999997 7655  44444444321    3678888765432 11111110     00  0 01112223466789999


Q ss_pred             EEEEcccCcC
Q 046878           74 VVISTVAYPQ   83 (104)
Q Consensus        74 ~vv~~a~~~~   83 (104)
                      +||++++...
T Consensus        80 vVv~ta~~~~   89 (169)
T d1s6ya1          80 FVTTQFRVGG   89 (169)
T ss_dssp             EEEECCCTTH
T ss_pred             EEEEccccCC
Confidence            9999999765

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.00042  Score=38.75  Aligned_cols=34  Identities=15%  Similarity=0.218  Sum_probs=27.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARP   40 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~   40 (104)
                      |++|.|+|+||.||+..+..+.+..  ++|.+++-.
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~   36 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAG   36 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEES
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEec
Confidence            4589999999999999999888763  567766543

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=97.03  E-value=0.00071  Score=38.42  Aligned_cols=75  Identities=11%  Similarity=0.086  Sum_probs=48.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccCh----HHHHHhh--ccccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDEH----EKIISIL--KEVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~--~~~d~vv~~   78 (104)
                      +..+++|+|+ |.+|...+..+...|. +|+++++++++.+...+..-.. ..|+.+.    +......  .+.|++|-+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~-~i~~~~~d~~~~~~~~~~~~~G~d~vid~  104 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATE-CLNPKDYDKPIYEVICEKTNGGVDYAVEC  104 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSE-EECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcE-EEcCCCchhHHHHHHHHhcCCCCcEEEEc
Confidence            3468999997 9999999999988885 6888888877663332222111 1122221    2222222  368999999


Q ss_pred             ccCc
Q 046878           79 VAYP   82 (104)
Q Consensus        79 a~~~   82 (104)
                      +|..
T Consensus       105 ~g~~  108 (174)
T d1p0fa2         105 AGRI  108 (174)
T ss_dssp             SCCH
T ss_pred             CCCc
Confidence            9875

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.00051  Score=39.31  Aligned_cols=37  Identities=16%  Similarity=0.211  Sum_probs=33.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+++|.||+|.+|...++.....|.+|+++++++++.
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~   69 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH
Confidence            4799999999999999999999999999999988765

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=96.98  E-value=0.0073  Score=32.57  Aligned_cols=75  Identities=19%  Similarity=0.177  Sum_probs=49.6

Q ss_pred             CCCCeEEEEccCC----------hhhHHHHHHHHhCCCeEEEEEcCCCCccc-ccccccccccccccChHHHHHhh--cc
Q 046878            5 NTKPKILIFGGTG----------YLGKYMVKASVSSGHNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKIISIL--KE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~G----------~iG~~l~~~l~~~~~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~--~~   71 (104)
                      ...++++|+|+..          +.+.+.++.|.+.|+++.++..+|+.... .+..+..  ..+....+.+.+.+  .+
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD~l--YfePlt~e~v~~Ii~~E~   82 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMADAT--YIEPIHWEVVRKIIEKER   82 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSSEE--ECSCCCHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhccee--eeecCCHHHHHHHHHHhC
Confidence            3457999999733          34668899999999999999998877521 1111111  11344567777765  46


Q ss_pred             ccEEEEcccC
Q 046878           72 VGVVISTVAY   81 (104)
Q Consensus        72 ~d~vv~~a~~   81 (104)
                      +|.|+-..|.
T Consensus        83 pd~il~~~GG   92 (127)
T d1a9xa3          83 PDAVLPTMGG   92 (127)
T ss_dssp             CSEEECSSSH
T ss_pred             cCCeEEEeee
Confidence            8888876664

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=96.96  E-value=0.0016  Score=35.58  Aligned_cols=36  Identities=11%  Similarity=0.163  Sum_probs=29.6

Q ss_pred             CCCeEEEEccC---ChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            6 TKPKILIFGGT---GYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         6 ~~~~i~i~Ga~---G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ..++|.|+|+|   +..|..+.+.|.+.|++++.+.-++
T Consensus        12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~   50 (136)
T d1iuka_          12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRF   50 (136)
T ss_dssp             HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGG
T ss_pred             CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecc
Confidence            35789999996   5689999999999999988776543

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=96.95  E-value=0.00059  Score=41.48  Aligned_cols=32  Identities=28%  Similarity=0.497  Sum_probs=29.0

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~   41 (104)
                      +|+|+|| |.+|..++.+|.++|. +|+++.+++
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999997 9999999999999995 699998875

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.94  E-value=0.00083  Score=37.79  Aligned_cols=35  Identities=17%  Similarity=0.172  Sum_probs=28.9

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .+++|+|+|+ |.+|-.++..|...|.++.++.+.+
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            3468999997 9999999999999998876665544

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.93  E-value=0.00052  Score=41.43  Aligned_cols=34  Identities=18%  Similarity=0.328  Sum_probs=31.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      .+|+|+|| |-.|..++..|.+.|++|.++.++++
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47999997 99999999999999999999998763

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=96.93  E-value=0.00063  Score=40.88  Aligned_cols=31  Identities=16%  Similarity=0.235  Sum_probs=28.9

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|| |..|..++.+|.++|++|.++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            799997 9999999999999999999999864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.93  E-value=0.00063  Score=39.36  Aligned_cols=31  Identities=10%  Similarity=0.209  Sum_probs=29.0

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|| |..|...|..|.++|++|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            799996 9999999999999999999999875

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=96.92  E-value=0.0011  Score=36.78  Aligned_cols=33  Identities=9%  Similarity=0.282  Sum_probs=28.3

Q ss_pred             CeEEEE--ccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIF--GGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~--Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +.++|+  |+ |++|..++..|.+.|.+|+++.+.+
T Consensus        40 ~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          40 KRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             SEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCC
Confidence            355565  65 9999999999999999999999875

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=96.92  E-value=0.00094  Score=41.32  Aligned_cols=35  Identities=26%  Similarity=0.313  Sum_probs=29.9

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~~   42 (104)
                      +++|+|+|| |..|...+..|++.+  ++|+++.++..
T Consensus         4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            468999997 999999999998776  58999988753

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=96.91  E-value=0.00067  Score=39.49  Aligned_cols=32  Identities=16%  Similarity=0.345  Sum_probs=28.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~   41 (104)
                      +|+|+|| |..|...+..|.++|+ +|+++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            7999997 9999999999999996 799998865

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.90  E-value=0.00095  Score=37.65  Aligned_cols=74  Identities=14%  Similarity=0.154  Sum_probs=44.8

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccC--hHHHHHhh--ccccEEEEcccC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDE--HEKIISIL--KEVGVVISTVAY   81 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~--~~~~~~~~--~~~d~vv~~a~~   81 (104)
                      ..+++|.|+ |.+|...+..+...|. .|+++++++.+.+......-.. ..+..+  .+...+..  .++|+||.++|.
T Consensus        33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~-~i~~~~~~~~~~~~~~~~~g~d~vid~~g~  110 (172)
T d1h2ba2          33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADH-VVDARRDPVKQVMELTRGRGVNVAMDFVGS  110 (172)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSE-EEETTSCHHHHHHHHTTTCCEEEEEESSCC
T ss_pred             CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccce-eecCcccHHHHHHHhhCCCCceEEEEecCc
Confidence            468999996 9999999988877775 6677777765442222221111 112222  22233322  358999999986


Q ss_pred             c
Q 046878           82 P   82 (104)
Q Consensus        82 ~   82 (104)
                      .
T Consensus       111 ~  111 (172)
T d1h2ba2         111 Q  111 (172)
T ss_dssp             H
T ss_pred             c
Confidence            4

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=96.87  E-value=0.0019  Score=34.10  Aligned_cols=36  Identities=19%  Similarity=0.197  Sum_probs=29.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHh---CCCeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVS---SGHNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~---~~~~v~~~~r~~~~   43 (104)
                      +++++|+|+ |++|-.++..|.+   .|.+|+++.|.+.-
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence            468999997 9999999987654   47799999987643

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.86  E-value=0.0012  Score=39.12  Aligned_cols=35  Identities=23%  Similarity=0.161  Sum_probs=30.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTE   43 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~   43 (104)
                      .+|+|+|| |..|..++..|.+.|. +|.++.+++..
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~~   37 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSEI   37 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence            58999997 9999999999999995 88899887643

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.82  E-value=0.001  Score=38.12  Aligned_cols=33  Identities=15%  Similarity=0.161  Sum_probs=27.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC--CeEEEEEcCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG--HNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~--~~v~~~~r~~   41 (104)
                      |||+|+|| |++|..++..|.+.+  .+|+++.|++
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            58999997 999999999998764  5788887754

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.79  E-value=0.0027  Score=41.03  Aligned_cols=34  Identities=29%  Similarity=0.377  Sum_probs=29.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~   41 (104)
                      ..||+|+|+ |.+|.++++.|...|. ++.+++.+.
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~   71 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT   71 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            468999997 8999999999999996 788887753

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.65  E-value=0.00013  Score=42.80  Aligned_cols=25  Identities=16%  Similarity=0.325  Sum_probs=22.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCe
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHN   33 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~   33 (104)
                      |||+|+|| |-+|...+.+|.++|++
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~   25 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHS   25 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTT
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCC
Confidence            57999997 99999999999999875

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=96.65  E-value=0.0026  Score=33.59  Aligned_cols=35  Identities=14%  Similarity=0.234  Sum_probs=28.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHh---CCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVS---SGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~---~~~~v~~~~r~~~   42 (104)
                      +++++|+|+ |++|-.++..|.+   .+.+|+++.+.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            468999997 9999999976654   3467999988764

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.64  E-value=0.0015  Score=36.25  Aligned_cols=31  Identities=23%  Similarity=0.218  Sum_probs=26.7

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ||+|+|+ |++|..++..|.+ +.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~~-~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLSQ-TYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHHc-CCCEEEEeccc
Confidence            7999997 9999999998865 67999988754

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.64  E-value=0.0057  Score=37.50  Aligned_cols=34  Identities=18%  Similarity=0.170  Sum_probs=27.8

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +++==-+||.+|.++++.++.+|+.|+++.+...
T Consensus        38 R~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~~s   71 (290)
T d1p9oa_          38 RFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS   71 (290)
T ss_dssp             EEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred             eEeCCCCchHHHHHHHHHHHHcCCEEEEEecCCc
Confidence            4444456899999999999999999999977643

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=96.60  E-value=0.00097  Score=37.71  Aligned_cols=30  Identities=13%  Similarity=0.314  Sum_probs=24.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~   38 (104)
                      .+|+|+|+ |++|-.++..|.+.|.++.++.
T Consensus         4 a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~   33 (183)
T d1d7ya1           4 APVVVLGA-GLASVSFVAELRQAGYQGLITV   33 (183)
T ss_dssp             SSEEEECC-SHHHHHHHHHHHHHTCCSCEEE
T ss_pred             CCEEEECc-cHHHHHHHHHHHhcCCceEEEE
Confidence            47999997 9999999999999887654443

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.57  E-value=0.0069  Score=33.91  Aligned_cols=76  Identities=14%  Similarity=0.187  Sum_probs=46.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccC----hHHHHHhh--ccccEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDE----HEKIISIL--KEVGVVIST   78 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~--~~~d~vv~~   78 (104)
                      +..+++|+|+ |.+|...+..+...+. .|+++++++++.+......-.. ..++.+    .+...+..  .++|+++-+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~-~in~~~~~~~~~~~~~~~~~~G~d~vid~  105 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATD-FVNPNDHSEPISQVLSKMTNGGVDFSLEC  105 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCE-EECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcE-EEcCCCcchhHHHHHHhhccCCcceeeee
Confidence            3468999997 7788887877777664 6888888876663322222111 112222    22333332  368999999


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      +|...
T Consensus       106 ~G~~~  110 (175)
T d1cdoa2         106 VGNVG  110 (175)
T ss_dssp             SCCHH
T ss_pred             cCCHH
Confidence            99753

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.56  E-value=0.0028  Score=36.55  Aligned_cols=74  Identities=16%  Similarity=0.194  Sum_probs=46.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCCCcccccccccccccccccC---hHHHHHhhc--cccEEEEcc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTENSRTSKLEIHKEFQELDE---HEKIISILK--EVGVVISTV   79 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~--~~d~vv~~a   79 (104)
                      ...+++|+|+ |.+|...+..+...|. .|+++++++.+.+...+..... ..+..+   .+.+.+...  ++|++|.+.
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~-~~~~~~~~~~~~i~~~t~g~g~D~vid~v  102 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEI-ADLSLDTPLHEQIAALLGEPEVDCAVDAV  102 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEE-EETTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccE-EEeCCCcCHHHHHHHHhCCCCcEEEEECc
Confidence            3468999997 9999888887777665 7888888876553322221111 112222   223333332  589999999


Q ss_pred             cC
Q 046878           80 AY   81 (104)
Q Consensus        80 ~~   81 (104)
                      |.
T Consensus       103 G~  104 (195)
T d1kola2         103 GF  104 (195)
T ss_dssp             CT
T ss_pred             cc
Confidence            84

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=96.54  E-value=0.002  Score=39.60  Aligned_cols=33  Identities=21%  Similarity=0.384  Sum_probs=29.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ..|+|+|| |..|..++..|.+.|.++.++.+.+
T Consensus         8 ~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           8 VDVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            46999998 9999999999999999999998764

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=0.0019  Score=39.30  Aligned_cols=31  Identities=29%  Similarity=0.385  Sum_probs=28.6

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      |+|+|| |..|...+..|.++|++|+++.+++
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789997 9999999999999999999998765

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.51  E-value=0.0011  Score=38.02  Aligned_cols=37  Identities=24%  Similarity=0.290  Sum_probs=30.1

Q ss_pred             CeEEEE-ccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            8 PKILIF-GGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         8 ~~i~i~-Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      .+++|. ||+|.+|...++.....|.+|+++.|+++..
T Consensus        30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~   67 (189)
T d1gu7a2          30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL   67 (189)
T ss_dssp             TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred             CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc
Confidence            567775 7889999999998888899998888776543

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.45  E-value=0.0037  Score=36.39  Aligned_cols=38  Identities=16%  Similarity=0.220  Sum_probs=32.5

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +++.+++.|-|. |.+|+++++.|.+.|..|++.+.+..
T Consensus        24 ~L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~   61 (201)
T d1c1da1          24 SLDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTE   61 (201)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHH
Confidence            356789999995 99999999999999999988776543

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=96.37  E-value=0.0029  Score=37.60  Aligned_cols=37  Identities=16%  Similarity=0.097  Sum_probs=32.0

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +++.++++|-|- |.+|+++++.|.+.|..+++.+.+.
T Consensus        36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccH
Confidence            356789999995 9999999999999999998876654

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=96.35  E-value=0.0081  Score=34.81  Aligned_cols=31  Identities=16%  Similarity=0.162  Sum_probs=26.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      ||++++|. +.+|..+++.|.++|+++.++..
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt   31 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFT   31 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEc
Confidence            57899985 78999999999999999865543

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.33  E-value=0.0069  Score=35.45  Aligned_cols=91  Identities=20%  Similarity=0.220  Sum_probs=55.4

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCcccc---cccccc----cccc-----------cccChHHH
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRT---SKLEIH----KEFQ-----------ELDEHEKI   65 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~---~~~~~~----~~~~-----------d~~~~~~~   65 (104)
                      +.+|.|+|. |.-|..++..|.+.+.   +.++++.+.......   .+...-    ....           ...+.+.+
T Consensus        15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~e~~~~I   93 (209)
T d2vapa1          15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAKESAEEI   93 (209)
T ss_dssp             CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHHHTHHHH
T ss_pred             CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHHHHHHHH
Confidence            358999997 9999999999998774   345555543222111   000000    0000           22345677


Q ss_pred             HHhhccccEEEEcccCcC---hhhHHHHHHHHHHhC
Q 046878           66 ISILKEVGVVISTVAYPQ---LLDQLKIVDAIKVAG   98 (104)
Q Consensus        66 ~~~~~~~d~vv~~a~~~~---~~~~~~l~~~~~~~~   98 (104)
                      .+.++++|.||.++|...   .-...-+++.+++.+
T Consensus        94 ~~~l~~~d~vfi~AGlGGGTGsgaapvia~~ake~g  129 (209)
T d2vapa1          94 KAAIQDSDMVFITCGLGGGTGTGSAPVVAEISKKIG  129 (209)
T ss_dssp             HHHHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred             HHhccCCCEEEEEEeCCCCccccHHHHHHHHHHHcC
Confidence            888899999999998865   223345556666654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.31  E-value=0.0061  Score=37.47  Aligned_cols=37  Identities=11%  Similarity=0.031  Sum_probs=31.7

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .++.++++|-|- |.+|+++++.|.+.|..|+.++-+.
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~~   69 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGESD   69 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEccc
Confidence            456789999995 9999999999999999988877654

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.0036  Score=33.97  Aligned_cols=35  Identities=26%  Similarity=0.332  Sum_probs=28.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHH----hCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASV----SSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~----~~~~~v~~~~r~~~   42 (104)
                      .++++|+|+ |++|..++..|.    ..|.+|+++.+.+.
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~   75 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG   75 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence            368999997 999999998885    35789999888654

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.26  E-value=0.0021  Score=36.75  Aligned_cols=69  Identities=19%  Similarity=0.112  Sum_probs=48.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      ++.++|.|+|- |.-|.+=+..|.+.|.+|.+--|..+..  +.+.+     .+=.+.-++.++.+.+|+|..+.+-
T Consensus        14 ik~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s--~~~A~-----~~Gf~v~~~~eA~~~aDiim~L~PD   82 (182)
T d1np3a2          14 IQGKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSAT--VAKAE-----AHGLKVADVKTAVAAADVVMILTPD   82 (182)
T ss_dssp             HHTSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHH--HHHHH-----HTTCEEECHHHHHHTCSEEEECSCH
T ss_pred             HCCCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCcc--HHHHh-----hhccccccHHHHhhhcCeeeeecch
Confidence            35689999997 9999999999999999998877765322  11111     1122234457778888988888874

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0084  Score=34.77  Aligned_cols=32  Identities=19%  Similarity=0.201  Sum_probs=27.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      |||+++|. +..|..+++.|.+++++|.++...
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t~   32 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFTV   32 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEcC
Confidence            58999995 899999999999999998765543

>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.19  E-value=0.023  Score=32.85  Aligned_cols=89  Identities=17%  Similarity=0.165  Sum_probs=55.5

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCccccc---ccccccc----cc-----------cccChHHHHH
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRTS---KLEIHKE----FQ-----------ELDEHEKIIS   67 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~~---~~~~~~~----~~-----------d~~~~~~~~~   67 (104)
                      +|-|+|- |.-|..++..|.+.+.   +.+.++.+........   +...-..    ..           -..+.+.+.+
T Consensus         3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~~   81 (198)
T d1ofua1           3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISE   81 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            5789996 9999999999998874   4566666554432111   1110000    00           2234667788


Q ss_pred             hhccccEEEEcccCcC---hhhHHHHHHHHHHhC
Q 046878           68 ILKEVGVVISTVAYPQ---LLDQLKIVDAIKVAG   98 (104)
Q Consensus        68 ~~~~~d~vv~~a~~~~---~~~~~~l~~~~~~~~   98 (104)
                      .++++|.||.+||...   .-...-+++.+++.+
T Consensus        82 ~l~~~d~vfi~AGlGGGTGtgaapviA~~ake~g  115 (198)
T d1ofua1          82 VLEGADMVFITTGMGGGTGTGAAPIIAEVAKEMG  115 (198)
T ss_dssp             HHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCeEEEEecCCCCccccHHHHHHHHHHHcC
Confidence            8899999999999865   222344666666654

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=96.18  E-value=0.015  Score=33.56  Aligned_cols=90  Identities=20%  Similarity=0.252  Sum_probs=54.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCcccc---cccccccc----cc-----------cccChHHHH
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSRT---SKLEIHKE----FQ-----------ELDEHEKII   66 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~~---~~~~~~~~----~~-----------d~~~~~~~~   66 (104)
                      +||.|+|- |.-|..++..|.+.+.   +..+++.+.......   .+...-..    ..           -..+.+.+.
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I~   79 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKIR   79 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHHHH
Confidence            37899996 9999999999988764   345555543322110   01100000    00           223466778


Q ss_pred             HhhccccEEEEcccCcC---hhhHHHHHHHHHHhC
Q 046878           67 SILKEVGVVISTVAYPQ---LLDQLKIVDAIKVAG   98 (104)
Q Consensus        67 ~~~~~~d~vv~~a~~~~---~~~~~~l~~~~~~~~   98 (104)
                      +.++++|.||.++|...   .-....+++.+++.+
T Consensus        80 ~~l~~~d~vfi~AGlGGgTGtgaapviA~~ake~g  114 (194)
T d1w5fa1          80 EVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMG  114 (194)
T ss_dssp             HHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTT
T ss_pred             HHhcCCCeEEEEEecCCCcccchHHHHHHHHHHcC
Confidence            88899999999998765   223345666666654

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=96.04  E-value=0.0052  Score=36.02  Aligned_cols=33  Identities=18%  Similarity=0.414  Sum_probs=29.7

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      -|+|+|| |-.|...+..|.++|++|.++.+.+.
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4899997 99999999999999999999988753

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=96.03  E-value=0.0036  Score=36.73  Aligned_cols=72  Identities=7%  Similarity=0.051  Sum_probs=38.0

Q ss_pred             CeEEEEccCChhhH-HHHHHHHhC-CCeEEEE-EcCCCCccc-ccccccc-cccccccChHHHHHhh--ccccEEEEccc
Q 046878            8 PKILIFGGTGYLGK-YMVKASVSS-GHNTFVY-ARPVTENSR-TSKLEIH-KEFQELDEHEKIISIL--KEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~-~l~~~l~~~-~~~v~~~-~r~~~~~~~-~~~~~~~-~~~~d~~~~~~~~~~~--~~~d~vv~~a~   80 (104)
                      -+|.|+|+ |.+|+ +.+..+... +.++..+ +++++.... ......- .....+.|.   .+++  .++|+|+.+++
T Consensus        34 iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~---~ell~~~~iD~V~I~tp  109 (221)
T d1h6da1          34 FGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNF---DKIAKDPKIDAVYIILP  109 (221)
T ss_dssp             EEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSG---GGGGGCTTCCEEEECSC
T ss_pred             EEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCch---hhhcccccceeeeeccc
Confidence            48999996 99997 456665554 4566644 554433211 1111100 001123333   3334  36899998887


Q ss_pred             CcC
Q 046878           81 YPQ   83 (104)
Q Consensus        81 ~~~   83 (104)
                      ...
T Consensus       110 ~~~  112 (221)
T d1h6da1         110 NSL  112 (221)
T ss_dssp             GGG
T ss_pred             hhh
Confidence            643

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.96  E-value=0.0054  Score=35.67  Aligned_cols=34  Identities=21%  Similarity=0.443  Sum_probs=29.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~   42 (104)
                      .||+|+|| |-.|...+..|.++  +++|+++.+.+.
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            48999997 99999999999865  679999988753

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=95.82  E-value=0.014  Score=34.83  Aligned_cols=37  Identities=14%  Similarity=0.116  Sum_probs=31.6

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .++.++++|-|- |.+|+++++.|.+.|..|+.++...
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~~   64 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDIN   64 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeeccc
Confidence            356689999995 9999999999999999988777654

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=95.66  E-value=0.0081  Score=37.21  Aligned_cols=31  Identities=16%  Similarity=0.206  Sum_probs=28.3

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      -++|+|+ |+-|..++..|.++|++|.++-+.
T Consensus         4 ~VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           4 PAVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             eEEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            3789996 999999999999999999999884

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=95.56  E-value=0.059  Score=30.95  Aligned_cols=34  Identities=24%  Similarity=0.239  Sum_probs=27.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      .+|||+++|. +.++..+.+.|.+.++++..+...
T Consensus         2 ~~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~   35 (206)
T d1fmta2           2 ESLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQ   35 (206)
T ss_dssp             CCCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeC
Confidence            3568999994 889999999999999987655443

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=95.53  E-value=0.015  Score=32.18  Aligned_cols=35  Identities=14%  Similarity=0.278  Sum_probs=29.0

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~~~   42 (104)
                      .++++|+|+ |.+|...+..+.+.|. .|+++.|++.
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            358999997 9999999999999885 5778877653

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=95.48  E-value=0.012  Score=34.77  Aligned_cols=34  Identities=18%  Similarity=0.318  Sum_probs=30.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ..|+|+|| |-.|...+..|.++|.+|.++.+.+.
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            35999997 99999999999999999999998754

>d1ebfa1 c.2.1.3 (A:2-150,A:341-359) Homoserine dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Homoserine dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.48  E-value=0.067  Score=29.83  Aligned_cols=25  Identities=12%  Similarity=0.326  Sum_probs=21.0

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSG   31 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~   31 (104)
                      ++.+|+++|. |.+|+.+++.|.++.
T Consensus         3 k~i~I~l~G~-G~VG~~l~~~l~~~~   27 (168)
T d1ebfa1           3 KVVNVAVIGA-GVVGSAFLDQLLAMK   27 (168)
T ss_dssp             SEEEEEEECC-SHHHHHHHHHHHHCC
T ss_pred             CEEEEEEEeC-CHHHHHHHHHHHHhH
Confidence            4457999996 999999999998754

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=95.46  E-value=0.011  Score=35.81  Aligned_cols=32  Identities=16%  Similarity=0.311  Sum_probs=29.2

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      -|+|+|+ |..|...+..|.++|.+|.++.+.+
T Consensus        18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            4899997 9999999999999999999998765

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=95.42  E-value=0.021  Score=32.16  Aligned_cols=31  Identities=23%  Similarity=0.240  Sum_probs=26.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      +||+|=|- |.||+.+.+.|.+.+.++..+.-
T Consensus         1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd   31 (168)
T d2g82a1           1 MKVGINGF-GRIGRQVFRILHSRGVEVALIND   31 (168)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEEC
T ss_pred             CEEEEECC-cHHHHHHHHHHhcCCCEEEEECC
Confidence            47899995 99999999999988888877664

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=95.39  E-value=0.014  Score=34.90  Aligned_cols=32  Identities=13%  Similarity=0.224  Sum_probs=28.6

Q ss_pred             eEEEEccCChhhHHHHHHHHh-CCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVS-SGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~~r~~   41 (104)
                      -|+|+|| |..|...+..|.+ .|.+|.++.+.+
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            4899997 9999999999987 499999999875

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=95.32  E-value=0.065  Score=31.78  Aligned_cols=36  Identities=22%  Similarity=0.220  Sum_probs=29.3

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHh-CCCeEEEEEcCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVS-SGHNTFVYARPV   41 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~-~~~~v~~~~r~~   41 (104)
                      ++.++++|-|- |.+|+++++.|.+ .|..|+.++...
T Consensus        30 l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~~   66 (239)
T d1gtma1          30 LKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDSK   66 (239)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             cCCCEEEEECC-CHHHHHHHHHHHHhcCcceeeccccc
Confidence            56789999996 9999999999975 588887776554

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=95.30  E-value=0.012  Score=35.85  Aligned_cols=35  Identities=17%  Similarity=0.242  Sum_probs=29.3

Q ss_pred             eEEEEccCChhhHHHHHHHH-----hCCCeEEEEEcCCCCc
Q 046878            9 KILIFGGTGYLGKYMVKASV-----SSGHNTFVYARPVTEN   44 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~-----~~~~~v~~~~r~~~~~   44 (104)
                      -|+|+|| |-.|..++..|.     ..|++|+++.+++...
T Consensus         9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~~   48 (360)
T d1pn0a1           9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV   48 (360)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC
T ss_pred             CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCCC
Confidence            3899997 999999999996     4689999999876443

>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.24  E-value=0.042  Score=31.74  Aligned_cols=89  Identities=16%  Similarity=0.165  Sum_probs=54.1

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCC---eEEEEEcCCCCccc---ccccccccc----cc-----------cccChHHHHH
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTENSR---TSKLEIHKE----FQ-----------ELDEHEKIIS   67 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~---~v~~~~r~~~~~~~---~~~~~~~~~----~~-----------d~~~~~~~~~   67 (104)
                      +|-|+|- |.-|-.++.+|.+.+.   +.++++.+......   ..+...-..    ..           -..+.+++.+
T Consensus         3 ~IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~~~I~~   81 (198)
T d1rq2a1           3 VIKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQALLMSDADVKLDVGRDSTRGLGAGADPEVGRKAAEDAKDEIEE   81 (198)
T ss_dssp             CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHHCCCSEEEECCTTTC-----CCCHHHHHHHHHHTHHHHHH
T ss_pred             eEEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHHHHhcCCcchhhccccccccCCCcCcChhhhHhhHHHHHHHHHH
Confidence            5778896 8899999999998874   34555544222210   011100000    00           2345678888


Q ss_pred             hhccccEEEEcccCcC---hhhHHHHHHHHHHhC
Q 046878           68 ILKEVGVVISTVAYPQ---LLDQLKIVDAIKVAG   98 (104)
Q Consensus        68 ~~~~~d~vv~~a~~~~---~~~~~~l~~~~~~~~   98 (104)
                      .+++.|.||-+||...   .-...-+++.+++.+
T Consensus        82 ~l~~~d~vfi~AGlGGgTGtGaaPviA~iake~g  115 (198)
T d1rq2a1          82 LLRGADMVFVTAGEGGGTGTGGAPVVASIARKLG  115 (198)
T ss_dssp             HHTTCSEEEEEEETTSSHHHHHHHHHHHHHHHHT
T ss_pred             HhcCCCEEEEEEecCCCCCcchHHHHHHHHHHcC
Confidence            8999999999999865   223345666776665

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=95.17  E-value=0.02  Score=34.41  Aligned_cols=36  Identities=14%  Similarity=0.117  Sum_probs=30.8

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      .++.+++.|-|- |.+|+++++.|.+.|..|+.++-.
T Consensus        33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence            356689999995 999999999999999998877654

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=95.11  E-value=0.02  Score=32.81  Aligned_cols=31  Identities=16%  Similarity=0.235  Sum_probs=28.1

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|| |..|...+..+.+.|.+|.++.+..
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789997 9999999999999999999998753

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.08  E-value=0.036  Score=32.78  Aligned_cols=36  Identities=14%  Similarity=0.265  Sum_probs=28.9

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHH-hCCCeEEEEEcC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASV-SSGHNTFVYARP   40 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~-~~~~~v~~~~r~   40 (104)
                      .++.+++.|-|- |.+|+++++.|. +.|..++.++.+
T Consensus        28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          28 DPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeecC
Confidence            356679999995 999999999996 568888777644

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.08  E-value=0.01  Score=34.31  Aligned_cols=33  Identities=12%  Similarity=0.056  Sum_probs=28.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC-------eEEEEEcCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH-------NTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~-------~v~~~~r~~   41 (104)
                      .+|+|+|+ |-.|...+..|.++|+       +|+++.+.+
T Consensus         3 ~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           3 YYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             cEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            58999997 9999999999998874       688988865

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=95.04  E-value=0.024  Score=32.57  Aligned_cols=38  Identities=16%  Similarity=0.224  Sum_probs=32.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      .+.++|+|+|+ |..|..++..+...+..++.+.|+...
T Consensus        30 ~~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~~~   67 (235)
T d1w4xa2          30 FSGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTPHF   67 (235)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred             CCCCEEEEECC-CccHHHHHHHHHhhhccccccccccce
Confidence            46689999996 999999999999988888888777544

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=95.00  E-value=0.016  Score=35.61  Aligned_cols=31  Identities=19%  Similarity=0.382  Sum_probs=28.1

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      -++|+|+ |.-|..++..|.++|++|.++-+.
T Consensus         6 DviIVGs-G~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           6 DVVIVGS-GPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             cEEEECc-CHHHHHHHHHHhhCCCeEEEEecC
Confidence            3899996 999999999999999999999874

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=95.00  E-value=0.015  Score=36.02  Aligned_cols=31  Identities=23%  Similarity=0.290  Sum_probs=28.0

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      -++|+|+ |.-|..++..|.++|.+|.++-+.
T Consensus         9 dvIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1           9 PALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            3789996 999999999999999999999874

>d1vl6a1 c.2.1.7 (A:155-376) Malate oxidoreductase (malic enzyme) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Malate oxidoreductase (malic enzyme)
species: Thermotoga maritima [TaxId: 2336]

Probab=94.95  E-value=0.05  Score=31.98  Aligned_cols=36  Identities=25%  Similarity=0.307  Sum_probs=30.6

Q ss_pred             CCCCCeEEEEccCChhhHHHHHHHHhCC-CeEEEEEcC
Q 046878            4 ENTKPKILIFGGTGYLGKYMVKASVSSG-HNTFVYARP   40 (104)
Q Consensus         4 ~~~~~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~   40 (104)
                      .++..++++.|| |.-|..+++.|.+.+ .++++++|.
T Consensus        23 ~l~d~riv~~GA-GsAg~gia~~l~~~~~~~i~~~D~~   59 (222)
T d1vl6a1          23 KIEEVKVVVNGI-GAAGYNIVKFLLDLGVKNVVAVDRK   59 (222)
T ss_dssp             CTTTCEEEEECC-SHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred             ChhhcEEEEECh-HHHHHHHHHHHHHhcccceEeecce
Confidence            356679999997 999999999999887 478888885

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=94.75  E-value=0.02  Score=32.33  Aligned_cols=31  Identities=29%  Similarity=0.483  Sum_probs=26.0

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      ||.|-|= |.||+.+.+.+++.+.++..+...
T Consensus         2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~   32 (169)
T d1dssg1           2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDP   32 (169)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCCEEEEECT
T ss_pred             eEEEECC-cHHHHHHHHHHHhCCCcEEEECCC
Confidence            6899994 999999999999888887776643

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=94.71  E-value=0.022  Score=34.65  Aligned_cols=33  Identities=15%  Similarity=0.303  Sum_probs=29.5

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      -|+|+|+ |..|...+..|.++|.+|.++.+.+.
T Consensus        25 DVvVIG~-G~aGl~aA~~la~~G~~V~llEk~~~   57 (322)
T d1d4ca2          25 DVVIIGS-GGAGLAAAVSARDAGAKVILLEKEPI   57 (322)
T ss_dssp             SEEEECS-SHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             eEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            4899996 99999999999999999999988653

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.65  E-value=0.026  Score=32.60  Aligned_cols=32  Identities=13%  Similarity=0.236  Sum_probs=26.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCC--eEEEEEcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGH--NTFVYARP   40 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~--~v~~~~r~   40 (104)
                      .+++|+|+ |+.|..++..|.+.++  +|+++++.
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e   38 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSED   38 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCC
Confidence            36789997 9999999999998775  58887764

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=94.64  E-value=0.016  Score=32.67  Aligned_cols=34  Identities=18%  Similarity=0.220  Sum_probs=29.6

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .++++|+|+ |..|..-+..+.+.|.+++++.+.+
T Consensus         5 ~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           5 HSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            357999997 9999999999999999999997654

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=94.62  E-value=0.022  Score=33.87  Aligned_cols=35  Identities=20%  Similarity=0.350  Sum_probs=28.4

Q ss_pred             CCeEEEEccCChhhH-----HHHHHHHhCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGK-----YMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~-----~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      |++|.|.| -|.+|+     +++..|.+.|++|.+++-++.
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            45789998 688887     566688888999999999864

>d1qmga2 c.2.1.6 (A:82-307) Class II ketol-acid reductoisomerase (KARI) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class II ketol-acid reductoisomerase (KARI)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=94.50  E-value=0.076  Score=31.16  Aligned_cols=71  Identities=8%  Similarity=-0.045  Sum_probs=44.3

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC------CeEEEEEcCCCCcccccccccccc-cccccChHHHHHhhccccEEEEccc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG------HNTFVYARPVTENSRTSKLEIHKE-FQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~------~~v~~~~r~~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      ++|.|+|- |.-|.+=+..|.+.|      ..|.+--|..+..  +.+.....- ..+. ..-++.++.+.+|+|..+++
T Consensus        45 KkIaViGY-GsQG~AhAlNLrDSG~~~~sgv~V~VGLr~gs~S--~~kA~~dGf~v~~~-~v~~v~EAv~~ADiVmiLlP  120 (226)
T d1qmga2          45 KQIGVIGW-GSQAPAQAQNLKDSLTEAKSDVVVKIGLRKGSNS--FAEARAAGFSEENG-TLGDMWETISGSDLVLLLIS  120 (226)
T ss_dssp             SEEEEECC-SSHHHHHHHHHHHHHHHTTCCCEEEEEECTTCSC--HHHHHHTTCCGGGT-CEEEHHHHHHTCSEEEECSC
T ss_pred             CEEEEEEe-ccHHHHHHHhChhhcccccCCceEEEEeCCCChh--HHHHHHcCCccCCC-cccCHHHHHhhCCEEEEecc
Confidence            68999997 999999999999854      4566666655433  111111100 0011 11245677888999998887


Q ss_pred             Cc
Q 046878           81 YP   82 (104)
Q Consensus        81 ~~   82 (104)
                      -.
T Consensus       121 De  122 (226)
T d1qmga2         121 DS  122 (226)
T ss_dssp             HH
T ss_pred             hH
Confidence            53

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=94.47  E-value=0.033  Score=33.69  Aligned_cols=34  Identities=15%  Similarity=0.307  Sum_probs=24.2

Q ss_pred             CeEEEEcc-C-Chh--hHHHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIFGG-T-GYL--GKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga-~-G~i--G~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +||+|++| | |.+  +.+++++|.++|++|..++...
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~   38 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD   38 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence            47888775 2 333  4468899999999998877543

>d2py6a1 c.66.1.56 (A:14-408) Methyltransferase FkbM {Methylobacillus flagellatus [TaxId: 405]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: FkbM-like
domain: Methyltransferase FkbM
species: Methylobacillus flagellatus [TaxId: 405]

Probab=94.45  E-value=0.072  Score=33.88  Aligned_cols=84  Identities=6%  Similarity=0.015  Sum_probs=48.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhh-ccccEEEEcccCcChhh
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISIL-KEVGVVISTVAYPQLLD   86 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vv~~a~~~~~~~   86 (104)
                      .++++.|+ |..|+.+++.|.++|.+|.+..-+.... ..+...-.+    +..++++.++. .+.++++...+.+ ...
T Consensus        39 ~~~~l~g~-~~~~~~~~~~~~~~~~~v~~~~d~~~~~-~~~~~~g~p----v~s~~~~~~~~~~~~~~~~v~~~~~-~~~  111 (395)
T d2py6a1          39 TRLVILGT-KGFGAHLMNVRHERPCEVIAAVDDFRYH-SGELYYGLP----IISTDRFTELATHDRDLVALNTCRY-DGP  111 (395)
T ss_dssp             CEEEEECS-SSTHHHHHSCSSSCSSEEEEEECTTTTT-SCCEETTEE----EECHHHHHHHHHTCTTEEEEECCCS-HHH
T ss_pred             ceEEEEcC-chhHHHHHHHHHHCCceEEEEecCchhh-cCceecceE----eecHHHhhhhhhccCcEEEEEeccc-cch
Confidence            46899997 9999999999999999888766554322 011111122    44556665554 3456555555532 222


Q ss_pred             HHHHHHHHHHhC
Q 046878           87 QLKIVDAIKVAG   98 (104)
Q Consensus        87 ~~~l~~~~~~~~   98 (104)
                      ...+...+.+++
T Consensus       112 ~~~~~~~~~~~~  123 (395)
T d2py6a1         112 KRFFDQICRTHG  123 (395)
T ss_dssp             HHHHHHHHHHTT
T ss_pred             hhHHHHHHHhcC
Confidence            233334455454

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=94.43  E-value=0.02  Score=32.57  Aligned_cols=30  Identities=27%  Similarity=0.438  Sum_probs=24.4

Q ss_pred             CeEEEEccCC-hhhH-----HHHHHHHhCCCeEEEEE
Q 046878            8 PKILIFGGTG-YLGK-----YMVKASVSSGHNTFVYA   38 (104)
Q Consensus         8 ~~i~i~Ga~G-~iG~-----~l~~~l~~~~~~v~~~~   38 (104)
                      ++++|+| || .+|+     .|+..|.++|++|.+++
T Consensus         2 ~~~~i~g-t~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTG-TDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEE-SSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEE-CCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            5789999 56 7887     67778889999988876

>d1trba2 c.3.1.5 (A:119-244) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=94.41  E-value=0.046  Score=29.05  Aligned_cols=36  Identities=14%  Similarity=0.130  Sum_probs=31.7

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +.++++|+|+ |..+-..+..|..-..+|+++.|+++
T Consensus        26 ~~k~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   61 (126)
T d1trba2          26 RNQKVAVIGG-GNTAVEEALYLSNIASEVHLIHRRDG   61 (126)
T ss_dssp             TTSEEEEECS-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHhhcCCcEEEEeeccc
Confidence            4579999997 99999999999987789999999864

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.35  E-value=0.016  Score=32.85  Aligned_cols=34  Identities=9%  Similarity=0.172  Sum_probs=29.3

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ..+++|+|| |-.|...+..|.+.|.++.++.+..
T Consensus         5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            358999997 9999999999999999988887654

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=94.22  E-value=0.03  Score=34.10  Aligned_cols=31  Identities=29%  Similarity=0.378  Sum_probs=28.2

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      |+|+|+ |..|...+..+.++|.+|.++...+
T Consensus         8 VvVIG~-G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGG-GLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEecCC
Confidence            899996 9999999999999999999998754

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=94.20  E-value=0.029  Score=34.16  Aligned_cols=32  Identities=22%  Similarity=0.373  Sum_probs=29.0

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      -|+|+|+ |..|...+..+.++|.+|.++.+.+
T Consensus        21 DVvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          21 QVLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899997 9999999999999999999998765

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=94.19  E-value=0.041  Score=31.38  Aligned_cols=31  Identities=23%  Similarity=0.294  Sum_probs=28.3

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|+ |-.|...+..+.+.|.+|.++.+.+
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            789997 9999999999999999999998764

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=93.92  E-value=0.048  Score=30.17  Aligned_cols=31  Identities=26%  Similarity=0.276  Sum_probs=27.6

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|| |..|...+..+.+.|.++.++.++.
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~~   34 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGERF   34 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSST
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEec
Confidence            789997 9999999999999999999998754

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.87  E-value=0.064  Score=30.68  Aligned_cols=33  Identities=24%  Similarity=0.340  Sum_probs=29.1

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      -++|+|+ |-.|...+..+.+.|.+|.++.+++.
T Consensus         7 DviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           7 DVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            3799997 99999999999999999999987643

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=93.65  E-value=0.082  Score=32.76  Aligned_cols=31  Identities=19%  Similarity=0.274  Sum_probs=27.9

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|+ |.-|.-++..|.++|.+|.++-+..
T Consensus         5 ~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG~   35 (360)
T d1kdga1           5 YIIVGA-GPGGIIAADRLSEAGKKVLLLERGG   35 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEEccC
Confidence            689996 9999999999999999999998764

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=93.60  E-value=0.11  Score=29.30  Aligned_cols=23  Identities=26%  Similarity=0.527  Sum_probs=19.5

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG   31 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~   31 (104)
                      +||+|=|= |.||+.+.+.+++.+
T Consensus         2 ikigINGf-GRIGR~v~R~~~~~~   24 (173)
T d1obfo1           2 IRVAINGY-GRIGRNILRAHYEGG   24 (173)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHTT
T ss_pred             eEEEEECC-cHHHHHHHHHHHhCC
Confidence            47999995 999999999998643

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=93.48  E-value=0.028  Score=35.13  Aligned_cols=72  Identities=14%  Similarity=0.248  Sum_probs=45.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHh-CC-CeEEEEEcCCCCccc-ccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTGYLGKYMVKASVS-SG-HNTFVYARPVTENSR-TSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~-~~-~~v~~~~r~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      +++.|+|+ |..+..-++.+.. .+ .+|.+.+|+++.... .........+ ++.--+++++++.++|+|+.+.+.
T Consensus       129 ~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~-~v~~~~s~~eav~~ADIi~t~Tas  203 (340)
T d1x7da_         129 RKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGL-TIRRASSVAEAVKGVDIITTVTAD  203 (340)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTC-EEEECSSHHHHHTTCSEEEECCCC
T ss_pred             ceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCC-CceecCCHHHHHhcCCceeecccc
Confidence            68999996 9999987777654 34 478999998755421 1111111100 222334567889999999987754

>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Succinate dehydogenase
species: Escherichia coli [TaxId: 562]

Probab=93.46  E-value=0.028  Score=34.48  Aligned_cols=40  Identities=15%  Similarity=0.162  Sum_probs=31.7

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      |+.+++.--|+|+|+ |.-|...+-.+.++|.+|.++++.+
T Consensus         1 ~~~~~~~~DVlVVG~-G~AGl~AAl~aa~~G~~V~lleK~~   40 (330)
T d1neka2           1 MKLPVREFDAVVIGA-GGAGMRAALQISQSGQTCALLSKVF   40 (330)
T ss_dssp             CCCCEEEESCEEECC-SHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred             CCCCcccCCEEEECc-CHHHHHHHHHHHHcCCeEEEEeCCC
Confidence            443333334899996 9999999999999999999998754

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=93.46  E-value=0.13  Score=30.10  Aligned_cols=74  Identities=14%  Similarity=0.121  Sum_probs=35.2

Q ss_pred             CCeEEEEccC---ChhhHHHHHHHHhC--CCeEEEEE-cCCCCcccccccccccccccccChHHHHHhhccccEEEEccc
Q 046878            7 KPKILIFGGT---GYLGKYMVKASVSS--GHNTFVYA-RPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVA   80 (104)
Q Consensus         7 ~~~i~i~Ga~---G~iG~~l~~~l~~~--~~~v~~~~-r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~   80 (104)
                      +.+++|+|++   |++++.-+..+...  +.+++++. ++++..+.....-.......+.+.+++.+. .++|+|+.+.+
T Consensus        16 ~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~iD~V~i~tp   94 (237)
T d2nvwa1          16 PIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQY-KDIDMIVVSVK   94 (237)
T ss_dssp             CEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHHC-TTCSEEEECSC
T ss_pred             CeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhcccc-cccceeeccCC
Confidence            3589999973   23555545555543  35666544 433222110000001111123444433211 36889988876


Q ss_pred             C
Q 046878           81 Y   81 (104)
Q Consensus        81 ~   81 (104)
                      .
T Consensus        95 ~   95 (237)
T d2nvwa1          95 V   95 (237)
T ss_dssp             H
T ss_pred             C
Confidence            5

>d3bswa1 b.81.1.8 (A:3-195) Acetyltransferase PglD {Campylobacter jejuni [TaxId: 197]}

class: All beta proteins
fold: Single-stranded left-handed beta-helix
superfamily: Trimeric LpxA-like enzymes
family: PglD-like
domain: Acetyltransferase PglD
species: Campylobacter jejuni [TaxId: 197]

Probab=93.44  E-value=0.19  Score=28.43  Aligned_cols=33  Identities=18%  Similarity=0.283  Sum_probs=24.7

Q ss_pred             CCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            7 KPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      .++++|+|| |..|+.+...+...++++.....+
T Consensus         2 ~kkl~i~Ga-gg~~~~v~di~~~~~~~~~~f~dd   34 (193)
T d3bswa1           2 TEKIYIYGA-SGHGLVCEDVAKNMGYKECIFLDD   34 (193)
T ss_dssp             CSEEEEEC---CHHHHHHHHHHHHTCCEEEECCC
T ss_pred             CCEEEEEcC-CHhHHHHHHHHHhCCCcEEEEEcC
Confidence            468999997 888999999888888877665433

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=93.42  E-value=0.15  Score=28.47  Aligned_cols=31  Identities=19%  Similarity=0.233  Sum_probs=24.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r   39 (104)
                      +||+|=|= |.||+.+.+.++++. .++..+.-
T Consensus         2 ikigINGF-GRIGR~v~R~~~~~~~i~ivaINd   33 (166)
T d1gado1           2 IKVGINGF-GRIGRIVFRAAQKRSDIEIVAIND   33 (166)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             eEEEEECC-cHHHHHHHHHHhhCCCeEEEEEeC
Confidence            37899995 999999999998864 45665553

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=93.39  E-value=0.093  Score=32.56  Aligned_cols=32  Identities=31%  Similarity=0.480  Sum_probs=24.1

Q ss_pred             CeEEEEcc------CChhh---HHHHHHHHhCCCeEEEEEc
Q 046878            8 PKILIFGG------TGYLG---KYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga------~G~iG---~~l~~~l~~~~~~v~~~~r   39 (104)
                      |||++++.      +|.+|   ..|++.|.+.||+|++++.
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            47877663      35555   5678899999999998874

>d2h1qa1 c.67.3.1 (A:1-251) Hypothetical protein Dhaf_3308 {Desulfitobacterium hafniense [TaxId: 49338]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: Dhaf3308-like
family: Dhaf3308-like
domain: Hypothetical protein Dhaf 3308
species: Desulfitobacterium hafniense [TaxId: 49338]

Probab=93.33  E-value=0.08  Score=31.58  Aligned_cols=72  Identities=13%  Similarity=0.031  Sum_probs=46.5

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcChh
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQLL   85 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~~~   85 (104)
                      ..++|.++|-   +  ..++.+.+.+.+++++.|++...             |+-+ +.....+..+|+||.+...-.-.
T Consensus       121 ~g~kV~vIG~---~--P~v~~l~~~~~~~~VlE~~p~~g-------------d~p~-~~~~~lLp~aD~viiTGsTlvN~  181 (251)
T d2h1qa1         121 KGKKVGVVGH---F--PHLESLLEPICDLSILEWSPEEG-------------DYPL-PASEFILPECDYVYITCASVVDK  181 (251)
T ss_dssp             TTSEEEEESC---C--TTHHHHHTTTSEEEEEESSCCTT-------------CEEG-GGHHHHGGGCSEEEEETHHHHHT
T ss_pred             CCCEEEEEec---c--hhHHHHHhcCCcEEEEeCCCCCC-------------CCCc-hHHHHhhhcCCEEEEEechhhcC
Confidence            3468999874   4  67788888889999999986432             1111 22356678888888777654323


Q ss_pred             hHHHHHHHHHH
Q 046878           86 DQLKIVDAIKV   96 (104)
Q Consensus        86 ~~~~l~~~~~~   96 (104)
                      ....+++.++.
T Consensus       182 Tl~~LL~~~~~  192 (251)
T d2h1qa1         182 TLPRLLELSRN  192 (251)
T ss_dssp             CHHHHHHHTTT
T ss_pred             CHHHHHHhCCc
Confidence            33556655543

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=93.33  E-value=0.068  Score=29.62  Aligned_cols=34  Identities=15%  Similarity=0.203  Sum_probs=27.6

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEE
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYA   38 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~   38 (104)
                      +++.+|+++|-...+...++..|..-|.++++++
T Consensus         2 l~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~   35 (163)
T d1pvva2           2 IKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVAT   35 (163)
T ss_dssp             CTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEec
Confidence            4678999999877788888888888888877654

>d1fl2a2 c.3.1.5 (A:326-451) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=93.30  E-value=0.1  Score=27.62  Aligned_cols=36  Identities=11%  Similarity=0.116  Sum_probs=30.8

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +.++++|+|+ |..+..-+..|.+-..+|+++.|+++
T Consensus        29 ~gk~V~VvGg-G~sA~~~A~~L~~~a~~V~li~r~~~   64 (126)
T d1fl2a2          29 KGKRVAVIGG-GNSGVEAAIDLAGIVEHVTLLEFAPE   64 (126)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred             CCceEEEEeC-CHHHHHHHHhhhccCCceEEEecccc
Confidence            4579999997 99999989899887779999998764

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.14  E-value=0.061  Score=30.76  Aligned_cols=32  Identities=25%  Similarity=0.271  Sum_probs=28.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      ..++|+|+ |-.|...+..+.+.|.+|.++.+.
T Consensus         6 ~DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           6 TTLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             cCEEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence            36899997 999999999999999999998765

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.08  E-value=0.088  Score=30.16  Aligned_cols=37  Identities=24%  Similarity=0.278  Sum_probs=28.4

Q ss_pred             CCeEEEEccCChhhH-----HHHHHHHhCCCeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGK-----YMVKASVSSGHNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~-----~l~~~l~~~~~~v~~~~r~~~~   43 (104)
                      |+.|.|+++-|.+|+     +++..|.+.|.+|.+++-++..
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~~~   42 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADITM   42 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCCSS
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence            356889988888877     6677788889999999876543

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.03  E-value=0.15  Score=28.46  Aligned_cols=30  Identities=20%  Similarity=0.285  Sum_probs=23.3

Q ss_pred             eEEEEccCChhhHHHHHHHHhCC-CeEEEEEc
Q 046878            9 KILIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r   39 (104)
                      ||.|=|= |.||+.+.+.++++. .++..+..
T Consensus         2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd   32 (166)
T d2b4ro1           2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAIND   32 (166)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred             eEEEECC-CHHHHHHHHHHhhCCCcEEEEECC
Confidence            6888885 999999999998764 45655543

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.91  E-value=0.1  Score=29.58  Aligned_cols=31  Identities=23%  Similarity=0.292  Sum_probs=27.7

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|+ |..|...+..+.+.|.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789997 9999999999999999999997653

>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=92.80  E-value=0.1  Score=30.97  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=25.4

Q ss_pred             CCeEEEEccCChhhH-----HHHHHHHhCCCeEEEEEcCC
Q 046878            7 KPKILIFGGTGYLGK-----YMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~-----~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +.+++++-+-|.+|+     +++..|.++|.+|.+++-++
T Consensus         7 ~p~~i~~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp   46 (296)
T d1ihua1           7 IPPYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDP   46 (296)
T ss_dssp             CCSEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CCeEEEEECCCcChHHHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            345544444688887     56777888999999999875

>d1vdca2 c.3.1.5 (A:118-243) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.72  E-value=0.13  Score=27.41  Aligned_cols=36  Identities=14%  Similarity=0.229  Sum_probs=31.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      +.++++|+|+ |..+-.-+..|..-..+|+++.|++.
T Consensus        33 rgk~V~VvGg-GdsA~e~A~~L~~~a~~V~li~r~~~   68 (130)
T d1vdca2          33 RNKPLAVIGG-GDSAMEEANFLTKYGSKVYIIHRRDA   68 (130)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred             CCCEEEEEcC-chHHHHHHHHHhCCCCcEEEEEeccc
Confidence            4678999997 99999999999987789999998864

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.70  E-value=0.029  Score=34.67  Aligned_cols=70  Identities=11%  Similarity=0.039  Sum_probs=42.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC-C-CeEEEEEcCCCCcccc-cccccccccccccChHHHHHhhccccEEEEcccCc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS-G-HNTFVYARPVTENSRT-SKLEIHKEFQELDEHEKIISILKEVGVVISTVAYP   82 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~-~-~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~   82 (104)
                      .+++|+|+ |..+..-++.|... . .+|.+.+|+++..+.. ....... +. .  ..+..+++.++|+|+.+.+..
T Consensus       126 ~~l~iiGa-G~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~-~~-~--~~~~~~a~~~aDiV~taT~s~  198 (320)
T d1omoa_         126 SVFGFIGC-GTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRG-IS-A--SVQPAEEASRCDVLVTTTPSR  198 (320)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTT-CC-E--EECCHHHHTSSSEEEECCCCS
T ss_pred             cEEEEecC-cccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcC-Cc-c--ccchhhhhccccEEEEeccCc
Confidence            57999995 99999988887753 3 3788998886554211 1111110 01 1  111245567899998887653

>d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=92.54  E-value=0.14  Score=29.48  Aligned_cols=37  Identities=11%  Similarity=0.278  Sum_probs=29.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHH--------------------hCC-CeEEEEEcCCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASV--------------------SSG-HNTFVYARPVTE   43 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~--------------------~~~-~~v~~~~r~~~~   43 (104)
                      ..++++|+|+ |.++.-+++.|+                    ..+ .+|+++.|+...
T Consensus        38 ~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~~   95 (216)
T d1lqta1          38 SGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL   95 (216)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred             cCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECChH
Confidence            4579999996 999999998876                    445 469999987543

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.45  E-value=0.04  Score=30.14  Aligned_cols=27  Identities=22%  Similarity=0.247  Sum_probs=23.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCe
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHN   33 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~   33 (104)
                      ..++++|+|+ |++|..++..+...|..
T Consensus        28 ~gkrVvVIGg-G~~g~d~a~~~~r~G~~   54 (162)
T d1ps9a2          28 VGNKVAIIGC-GGIGFDTAMYLSQPGES   54 (162)
T ss_dssp             CCSEEEEECC-HHHHHHHHHHHTCCSSC
T ss_pred             cCCceEEEcC-chhHHHHHHHHHHcCCc
Confidence            3478999997 99999999999988854

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=92.40  E-value=0.12  Score=29.00  Aligned_cols=31  Identities=23%  Similarity=0.372  Sum_probs=24.8

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC-CeEEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG-HNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r   39 (104)
                      .||+|=|= |.||+.+.+.+++.+ .++..+.-
T Consensus         2 ikIgINGF-GRIGR~v~R~~~~~~~~~ivaINd   33 (169)
T d1u8fo1           2 VKVGVNGF-GRIGRLVTRAAFNSGKVDIVAIND   33 (169)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred             cEEEEECC-cHHHHHHHHHHHHCCCcEEEEecC
Confidence            48999995 999999999988764 67766654

>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.39  E-value=0.098  Score=31.28  Aligned_cols=35  Identities=23%  Similarity=0.373  Sum_probs=27.6

Q ss_pred             CCeEEEEccCChhhH-----HHHHHHHhCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGK-----YMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~-----~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      |++|.|.| -|.+|+     +++..|.+.|++|.+++-++.
T Consensus         2 Mr~Iaisg-KGGVGKTT~a~NLA~~LA~~G~rVLlID~DpQ   41 (289)
T d2afhe1           2 MRQCAIYG-KGGIGKSTTTQNLVAALAEMGKKVMIVGCDPK   41 (289)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHHTTCCEEEEEECSS
T ss_pred             ccEEEEEC-CCCCCHHHHHHHHHHHHHHCCCCEEEEecCCC
Confidence            45788887 577777     567788889999999998764

>d1pj3a1 c.2.1.7 (A:280-573) Mitochondrial NAD(P)-dependent malic enzyme {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.37  Score=29.32  Aligned_cols=91  Identities=14%  Similarity=0.156  Sum_probs=49.4

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC----CC-------eEEEEEcCC----CCcccc-cccccccccccccChHHHHHh
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS----GH-------NTFVYARPV----TENSRT-SKLEIHKEFQELDEHEKIISI   68 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~----~~-------~v~~~~r~~----~~~~~~-~~~~~~~~~~d~~~~~~~~~~   68 (104)
                      ++..+|++.|| |.-|..+++.|...    |.       +++++++.-    ...... .+..............++.++
T Consensus        23 l~d~kiv~~GA-GsAg~gia~ll~~~~~~~g~~~~~a~~~i~lvD~~Glv~~~r~~~~~~~k~~~a~~~~~~~~~~L~e~  101 (294)
T d1pj3a1          23 ISEHKILFLGA-GEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYGLLVKGRKAKIDSYQEPFTHSAPESIPDTFEDA  101 (294)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTEECBTTCSSCCCTTTGGGCBCCCSSCCSSHHHH
T ss_pred             HHHcEEEEECc-cHHHHHHHHHHHHHHHhcCCchhhccccEEEEeCCCCccCCCCcccHHHHHHhhccccccchhHHHHH
Confidence            44578999997 99998888876543    32       488888741    111000 111111100111112356666


Q ss_pred             hc--cccEEEEcccCcChhhHHHHHHHHHHh
Q 046878           69 LK--EVGVVISTVAYPQLLDQLKIVDAIKVA   97 (104)
Q Consensus        69 ~~--~~d~vv~~a~~~~~~~~~~l~~~~~~~   97 (104)
                      ++  +.|+++-+.+.+.. .++.+++.....
T Consensus       102 i~~~kptvliG~S~~~g~-ft~evi~~Ma~~  131 (294)
T d1pj3a1         102 VNILKPSTIIGVAGAGRL-FTPDVIRAMASI  131 (294)
T ss_dssp             HHHHCCSEEEECCCSSCC-SCHHHHHHHHHH
T ss_pred             HHhcCCceEEEecCCCCc-CCHHHHHHHHhc
Confidence            54  67888888877642 235555554433

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=92.31  E-value=0.14  Score=28.94  Aligned_cols=32  Identities=16%  Similarity=0.217  Sum_probs=28.4

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      -++|+|+ |-.|...+..+.+.|.+|.++.+..
T Consensus         5 DviVIG~-GpaGl~aA~~aar~G~kV~vIEk~~   36 (223)
T d1ebda1           5 ETLVVGA-GPGGYVAAIRAAQLGQKVTIVEKGN   36 (223)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCEEEEEecCC
Confidence            4789997 9999999999999999999998754

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=92.27  E-value=0.18  Score=25.26  Aligned_cols=31  Identities=19%  Similarity=0.230  Sum_probs=25.1

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      |||+|+|. |.=-.+++..|.+...+++++.-
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~~v~~~pG   31 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYPG   31 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCeEEEecC
Confidence            58999995 77788999999888788877643

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=92.20  E-value=0.16  Score=30.01  Aligned_cols=36  Identities=14%  Similarity=0.267  Sum_probs=28.6

Q ss_pred             CCeEEEEccCChhhH-----HHHHHHHhCCCeEEEEEcCCC
Q 046878            7 KPKILIFGGTGYLGK-----YMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~-----~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ..+|+|+.|-|.+|+     +|+..|.+.|++|.+++-++.
T Consensus        19 ~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          19 EHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             SCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            357778866888888     456778889999999999864

>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Sulfolobus acidocaldarius [TaxId: 2285]

Probab=91.97  E-value=0.12  Score=28.18  Aligned_cols=34  Identities=3%  Similarity=-0.065  Sum_probs=25.4

Q ss_pred             CCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEEc
Q 046878            6 TKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         6 ~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      .+.+|+++|-..  .+...++..+..-|..+..+.-
T Consensus         2 ~gl~i~~vGD~~~sRv~~Sl~~~l~~~g~~~~~~~p   37 (153)
T d1pg5a2           2 DGLVFALLGDLKYARTVNSLLRILTRFRPKLVYLIS   37 (153)
T ss_dssp             TTCEEEEEECCSSCHHHHHHHHHGGGSCCSEEEEEC
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHHHcCCeeEEEec
Confidence            457899999633  3899999988888887655443

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=91.94  E-value=0.16  Score=29.81  Aligned_cols=31  Identities=13%  Similarity=0.307  Sum_probs=28.0

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|+ |-.|...+..+.+.|.+|.++.+..
T Consensus         4 viVIG~-G~aG~~aA~~aa~~G~~V~liE~~~   34 (259)
T d1onfa1           4 LIVIGG-GSGGMAAARRAARHNAKVALVEKSR   34 (259)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEecCC
Confidence            689997 9999999999999999999998753

>d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=91.93  E-value=0.16  Score=29.85  Aligned_cols=32  Identities=19%  Similarity=0.323  Sum_probs=28.6

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      -++|+|+ |..|...+..+.+.|.++.++.+.+
T Consensus        44 DvvVIGg-G~aG~~aA~~~a~~G~kv~vve~~~   75 (261)
T d1mo9a1          44 DAIFIGG-GAAGRFGSAYLRAMGGRQLIVDRWP   75 (261)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            3899997 9999999999999999999998765

>d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermotoga maritima [TaxId: 2336]

Probab=91.86  E-value=0.29  Score=27.37  Aligned_cols=29  Identities=14%  Similarity=0.233  Sum_probs=22.6

Q ss_pred             eEEEEccCChhhHHHHHHHHhCC---CeEEEEE
Q 046878            9 KILIFGGTGYLGKYMVKASVSSG---HNTFVYA   38 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~   38 (104)
                      ||+|=|- |.||+.+.+.++++.   .+++.+.
T Consensus         2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaIN   33 (169)
T d1hdgo1           2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAIN   33 (169)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEE
T ss_pred             EEEEECC-ChHHHHHHHHHHhccCCCEEEEEec
Confidence            7899995 999999999998643   4565554

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.86  E-value=0.18  Score=28.88  Aligned_cols=31  Identities=23%  Similarity=0.328  Sum_probs=28.2

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|+ |-.|...+..+.+.|.+|.++.+.+
T Consensus         9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence            789997 9999999999999999999998765

>d1gpea1 c.3.1.2 (A:1-328,A:525-587) Glucose oxidase {Penicillium amagasakiense [TaxId: 63559]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glucose oxidase
species: Penicillium amagasakiense [TaxId: 63559]

Probab=91.83  E-value=0.14  Score=32.06  Aligned_cols=31  Identities=19%  Similarity=0.299  Sum_probs=27.4

Q ss_pred             EEEEccCChhhHHHHHHHHhCC-CeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~   41 (104)
                      ++|+|+ |.-|..++..|.+++ +.|.++-+.+
T Consensus        27 ~IIVGs-G~aG~vlA~rLae~~~~~VLlLEaG~   58 (391)
T d1gpea1          27 YIIAGG-GLTGLTVAAKLTENPKIKVLVIEKGF   58 (391)
T ss_dssp             EEEECC-SHHHHHHHHHHHTSTTCCEEEEESSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            789996 999999999999988 6899998764

>d1cjca1 c.3.1.1 (A:107-331) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=91.80  E-value=0.18  Score=29.20  Aligned_cols=37  Identities=14%  Similarity=0.221  Sum_probs=30.1

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHh--------------------CC-CeEEEEEcCCCC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVS--------------------SG-HNTFVYARPVTE   43 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~--------------------~~-~~v~~~~r~~~~   43 (104)
                      +.++++|+|+ |.++.=+++.|+.                    .| .+|++++|+...
T Consensus        38 ~gk~VvVIGg-GNVAlD~aR~l~r~~~~l~~tdi~~~~l~~l~~~g~~~V~iv~RRg~~   95 (225)
T d1cjca1          38 SCDTAVILGQ-GNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPL   95 (225)
T ss_dssp             TSSEEEEESC-SHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGG
T ss_pred             cCceEEEECC-chhHHHHHHHHhcCHHhhcCCCCcHHHHHHHhccCCCeEEEEEEcChH
Confidence            4578999996 9999999998887                    35 479999988643

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.73  E-value=0.099  Score=34.44  Aligned_cols=34  Identities=12%  Similarity=0.144  Sum_probs=28.6

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCC-eEEEEEcC
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGH-NTFVYARP   40 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~-~v~~~~r~   40 (104)
                      ...+|+|+|+ |.+|.++++.|...|. .+++++.+
T Consensus        24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            3468999997 8999999999999995 68887654

>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.70  E-value=0.11  Score=28.66  Aligned_cols=73  Identities=16%  Similarity=0.170  Sum_probs=42.0

Q ss_pred             CCCeEEEEc-cCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccc---c-cc-cccccChHHHHHhhccccEEEEcc
Q 046878            6 TKPKILIFG-GTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEI---H-KE-FQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         6 ~~~~i~i~G-a~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~---~-~~-~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      ++.+|+++| +...+-..++..+..-|.++++++=..-.+ .......   . .. ...+.-.+++.++++++|+|+...
T Consensus         2 ~g~ki~~vGD~~nnV~~Sli~~~~~~g~~i~~~~P~~~~~-~~~~~~~~~~~~~~~~~~i~~~~d~~~ai~~aDviyt~~   80 (161)
T d1vlva2           2 KGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKP-RSDVFKRCQEIVKETDGSVSFTSNLEEALAGADVVYTDV   80 (161)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHTTCEEEEESCGGGCC-CHHHHHHHHHHHHHHCCEEEEESCHHHHHTTCSEEEECC
T ss_pred             CCCEEEEEcCCccHHHHHHHHHHHHcCCEEEEecchhhhh-hhhHHHHHHHHHhhcCCceEEEecHHHhhhhhhheeccc
Confidence            467999999 335788888888888888876654321111 0000000   0 00 012222345677889999888655

>d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]

Probab=91.66  E-value=0.27  Score=27.53  Aligned_cols=29  Identities=21%  Similarity=0.304  Sum_probs=23.1

Q ss_pred             eEEEEccCChhhHHHHHHHHhCC-CeEEEEE
Q 046878            9 KILIFGGTGYLGKYMVKASVSSG-HNTFVYA   38 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~   38 (104)
                      ||.|=|= |.||+.+.+.++++. .++..+.
T Consensus         3 kIgINGf-GRIGR~v~R~~l~~~~~~ivaIN   32 (171)
T d3cmco1           3 KVGINGF-GRIGRNVFRAALKNPDIEVVAVN   32 (171)
T ss_dssp             EEEEESC-SHHHHHHHHHHTTCTTEEEEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHhhCCCcEEEEEc
Confidence            6889995 999999999998764 4565554

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.57  E-value=0.14  Score=32.03  Aligned_cols=33  Identities=12%  Similarity=0.185  Sum_probs=28.7

Q ss_pred             eEEEEccCChhhHHHHHHHHh------CCCeEEEEEcCCC
Q 046878            9 KILIFGGTGYLGKYMVKASVS------SGHNTFVYARPVT   42 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~------~~~~v~~~~r~~~   42 (104)
                      -|+|+|| |=-|...+..|.+      .|.+|.++.+...
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~~   72 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAAH   72 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCCC
Confidence            4899997 9999999999886      7899999998753

>d2gjca1 c.3.1.6 (A:16-326) Thiazole biosynthetic enzyme Thi4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.49  E-value=0.13  Score=31.10  Aligned_cols=34  Identities=15%  Similarity=0.244  Sum_probs=29.0

Q ss_pred             CeEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSS--GHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~~   42 (104)
                      ..|+|+|+ |-.|...+..|.++  |++|.++.+.+.
T Consensus        51 ~~~~~~g~-g~~g~~~a~~~~~~~~~~~~~~~~~~~~   86 (311)
T d2gjca1          51 SDVIIVGA-GSSGLSAAYVIAKNRPDLKVCIIESSVA   86 (311)
T ss_dssp             ESEEEECC-SHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhCCCCeEEEEEcCCC
Confidence            35999997 99999999999864  899999988753

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.41  E-value=0.16  Score=29.14  Aligned_cols=32  Identities=22%  Similarity=0.302  Sum_probs=28.5

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ++|+|+ |-.|...+..+.+.|.+|.++.+.+.
T Consensus         6 viVIG~-GpaGl~aA~~aa~~G~kV~viE~~~~   37 (235)
T d1h6va1           6 LIIIGG-GSGGLAAAKEAAKFDKKVMVLDFVTP   37 (235)
T ss_dssp             EEEECC-SHHHHHHHHHHGGGCCCEEEECCCCC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            789997 99999999999999999999986553

>d2fzva1 c.23.5.4 (A:1-233) Putative arsenical resistance protein {Shigella flexneri [TaxId: 623]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: NADPH-dependent FMN reductase
domain: Putative arsenical resistance protein
species: Shigella flexneri [TaxId: 623]

Probab=91.39  E-value=0.72  Score=26.95  Aligned_cols=82  Identities=7%  Similarity=-0.014  Sum_probs=46.3

Q ss_pred             CCeEEEEccCCh---hhH----HHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcc
Q 046878            7 KPKILIFGGTGY---LGK----YMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTV   79 (104)
Q Consensus         7 ~~~i~i~Ga~G~---iG~----~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a   79 (104)
                      ..||+++.|+-.   ...    .+.+.+.+.|.++.+++-.........   ..   .+..+...+.+.+..+|.+|..+
T Consensus        34 ~~KIl~I~GS~R~~s~s~~la~~~~~~l~~~G~ev~~idL~dlpl~~~~---~~---~~~~~v~~l~~~l~~AD~vIi~t  107 (233)
T d2fzva1          34 PVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDLPLPDQV---QS---DDHPAVKELRALSEWSEGQVWCS  107 (233)
T ss_dssp             CCEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTCCCTTTS---GG---GCCHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCeEEEEeCCCCCCCHHHHHHHHHHHHhhhcCeEEEEEccCCCCCCCcc---cc---cCCHHHHHHHHHHhhcCeeEEEc
Confidence            357766655422   233    344455677889888775543221110   00   12223446677788999999998


Q ss_pred             cCcC---hhhHHHHHHHH
Q 046878           80 AYPQ---LLDQLKIVDAI   94 (104)
Q Consensus        80 ~~~~---~~~~~~l~~~~   94 (104)
                      +...   ....+++++.+
T Consensus       108 P~Y~~~~~~~lKn~iD~~  125 (233)
T d2fzva1         108 PERHGQITSVMKAQIDHL  125 (233)
T ss_dssp             EEETTEECHHHHHHHHHS
T ss_pred             cccccCcHHHHHhhHHhc
Confidence            8754   22346777765

>d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Spinach (Spinacia oleracea) [TaxId: 3562]

Probab=91.36  E-value=0.41  Score=26.78  Aligned_cols=30  Identities=20%  Similarity=0.266  Sum_probs=22.2

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCC---CeEEEEE
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSG---HNTFVYA   38 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~---~~v~~~~   38 (104)
                      +||+|=|= |.||+.+.+.++++.   .+++.+.
T Consensus         1 ikIgINGf-GRIGR~v~R~~~~~~~~~i~ivaIN   33 (172)
T d1rm4a1           1 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVIN   33 (172)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEEc
Confidence            37899995 999999999888653   2454443

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.20  E-value=0.24  Score=28.23  Aligned_cols=34  Identities=24%  Similarity=0.257  Sum_probs=26.9

Q ss_pred             CeEEEEccCChhhH-----HHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIFGGTGYLGK-----YMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~-----~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +.|.|+|+.|.+|+     +++..|...|.+|.+++-+.
T Consensus         3 ~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             eEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            46889988888887     66677778899999998653

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=90.85  E-value=0.2  Score=28.27  Aligned_cols=31  Identities=19%  Similarity=0.234  Sum_probs=28.0

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|+ |--|...+..+.+.|.+|.++.+..
T Consensus         6 viIIGg-GpAGl~aA~~aar~G~~V~viE~~~   36 (229)
T d3lada1           6 VIVIGA-GPGGYVAAIKSAQLGLKTALIEKYK   36 (229)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECCB
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence            789997 9999999999999999999998764

>d1cf3a1 c.3.1.2 (A:3-324,A:521-583) Glucose oxidase {Aspergillus niger [TaxId: 5061]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glucose oxidase
species: Aspergillus niger [TaxId: 5061]

Probab=90.79  E-value=0.18  Score=31.42  Aligned_cols=31  Identities=19%  Similarity=0.232  Sum_probs=26.9

Q ss_pred             EEEEccCChhhHHHHHHHHhCC-CeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSG-HNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~-~~v~~~~r~~   41 (104)
                      ++|+|+ |.-|..+|..|.+++ +.|.++-+.+
T Consensus        20 ~IIVGs-G~aG~vlA~rLse~~~~~VLvLEaG~   51 (385)
T d1cf3a1          20 YIIAGG-GLTGLTTAARLTENPNISVLVIESGS   51 (385)
T ss_dssp             EEEECC-SHHHHHHHHHHTTSTTCCEEEEESSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCeEEEECCCC
Confidence            689996 999999999999876 7899998764

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=90.56  E-value=0.2  Score=30.35  Aligned_cols=32  Identities=22%  Similarity=0.282  Sum_probs=22.9

Q ss_pred             CeEEEEccCChhh-----HHHHHHHHhCCCeEEEEEcC
Q 046878            8 PKILIFGGTGYLG-----KYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         8 ~~i~i~Ga~G~iG-----~~l~~~l~~~~~~v~~~~r~   40 (104)
                      |||++++. |.-|     .+|++.|.++||+|++++..
T Consensus         1 mril~~~~-gt~Ghi~P~laLA~~L~~rGh~V~~~~~~   37 (391)
T d1pn3a_           1 MRVLITGC-GSRGDTEPLVALAARLRELGADARMCLPP   37 (391)
T ss_dssp             CEEEEEEE-SSHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred             CEEEEEcC-CChhHHHHHHHHHHHHHHCCCEEEEEECh
Confidence            46777553 3323     37899999999999988743

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.52  E-value=0.0041  Score=36.51  Aligned_cols=34  Identities=12%  Similarity=0.110  Sum_probs=29.9

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT   42 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~   42 (104)
                      ++++|+|+ |++|..++..|...|.+|+++.|++.
T Consensus       181 ~~vvViGg-G~~g~e~A~~l~~~g~~Vtli~r~~~  214 (233)
T d1djqa3         181 APRLIADA-TFTGHRVAREIEEANPQIAIPYKRET  214 (233)
T ss_dssp             SCCCHHHH-HHHHHHHHHTTTSSCTTSCCCCCCCC
T ss_pred             CceeEecC-chHHHHHHHHHHhcCCceEEEEeccc
Confidence            57889997 99999999999999999988888764

>d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.44  E-value=0.67  Score=24.70  Aligned_cols=34  Identities=21%  Similarity=0.268  Sum_probs=28.4

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      +..++++-|-||..|+.-++++++-|.++++-..
T Consensus        14 k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVt   47 (130)
T d1euca1          14 KNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTT   47 (130)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeec
Confidence            4468999999999999999999998888765443

>d1nni1_ c.23.5.4 (1:) Azobenzene reductase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: NADPH-dependent FMN reductase
domain: Azobenzene reductase
species: Bacillus subtilis [TaxId: 1423]

Probab=90.30  E-value=0.38  Score=26.34  Aligned_cols=82  Identities=10%  Similarity=-0.029  Sum_probs=41.0

Q ss_pred             eEEEEccC---ChhhHHHHHHHHhCCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccCcC--
Q 046878            9 KILIFGGT---GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAYPQ--   83 (104)
Q Consensus         9 ~i~i~Ga~---G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~~~--   83 (104)
                      ||+++-||   +.....+++.+.+ +.++.+++-.....+....   ...-.+..+.+.+.+.+..+|.+|...+...  
T Consensus         2 KIl~I~GS~r~~s~t~~l~~~~~~-~~~~~~idl~~~~lp~~~~---~~~~~~~~~~~~l~~~i~~aD~vIi~sP~Y~~~   77 (171)
T d1nni1_           2 NMLVINGTPRKHGRTRIAASYIAA-LYHTDLIDLSEFVLPVFNG---EAEQSELLKVQELKQRVTKADAIVLLSPEYHSG   77 (171)
T ss_dssp             CEEEEECCCCTTCHHHHHHHHHHH-HHTCEEEETTTSCCCCCCC---CHHHHTSHHHHHHHHHHHHCSEEEEEEECBTTB
T ss_pred             EEEEEECCCCCcChHHHHHHHHHh-hCCceEEEcccCCCCCccc---cccccccHHHHHHHHHhhccCceEEechHHhcc
Confidence            45555444   3345666666654 3455555543322211110   0000122234456667789999999988754  


Q ss_pred             -hhhHHHHHHHH
Q 046878           84 -LLDQLKIVDAI   94 (104)
Q Consensus        84 -~~~~~~l~~~~   94 (104)
                       .....++++.+
T Consensus        78 ~~~~lKn~iD~~   89 (171)
T d1nni1_          78 MSGALKNALDFL   89 (171)
T ss_dssp             CCHHHHHHHHHC
T ss_pred             cchhHhHHHHHh
Confidence             22334555544

>d2j9ga2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Biotin carboxylase (BC), N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=90.26  E-value=0.64  Score=24.20  Aligned_cols=88  Identities=15%  Similarity=0.177  Sum_probs=56.6

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCccc----ccccccc---cccccccChHHHHHhhc--cccEEEEc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSR----TSKLEIH---KEFQELDEHEKIISILK--EVGVVIST   78 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~----~~~~~~~---~~~~d~~~~~~~~~~~~--~~d~vv~~   78 (104)
                      +|++|.-- |-+...+++.+.+.|.+.+.+.........    .+..-.+   +....|.|.+.+.+..+  ++|.|-  
T Consensus         3 ~kvLIANR-GeiA~Ri~ra~~elgi~tvavys~~D~~~~h~~~ade~v~lg~~~~~~sYl~~~~Ii~~A~~~~~dAiH--   79 (114)
T d2j9ga2           3 DKIVIANR-GEIALRILRACKELGIKTVAVHSSADRDLKHVLLADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIH--   79 (114)
T ss_dssp             SEEEECCC-HHHHHHHHHHHHHHTCEEEEEEEGGGTTCHHHHHSSEEEEEECSSGGGTTTCHHHHHHHHHHHTCSEEE--
T ss_pred             ceeeEecC-CHHHHHHHHHHHHhCCceEEEeccccccccceecCCceeecCCCchhhhhcCHHHHHHHHHHhCCceee--
Confidence            58999885 999999999999999876665544333211    1111111   11226888888877764  567553  


Q ss_pred             ccCcChhhHHHHHHHHHHhC
Q 046878           79 VAYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        79 a~~~~~~~~~~l~~~~~~~~   98 (104)
                      .|+..+-....+++++.+++
T Consensus        80 PGyGFLSEn~~Fa~~~~~ag   99 (114)
T d2j9ga2          80 PGYGFLSENANFAEQVERSG   99 (114)
T ss_dssp             CCSSTTTTCHHHHHHHHHTT
T ss_pred             cchhhhhhhHHHHHHHHHCC
Confidence            45555555568888888876

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=90.22  E-value=0.26  Score=31.30  Aligned_cols=31  Identities=23%  Similarity=0.136  Sum_probs=22.5

Q ss_pred             CeEEEEcc-------CChhh---HHHHHHHHhCCCeEEEEE
Q 046878            8 PKILIFGG-------TGYLG---KYMVKASVSSGHNTFVYA   38 (104)
Q Consensus         8 ~~i~i~Ga-------~G~iG---~~l~~~l~~~~~~v~~~~   38 (104)
                      |||+.+..       +|.+|   .+|+++|.++|++|.+++
T Consensus         1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_           1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            35666543       35555   678899999999999885

>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: UDP-glucosyltransferase GtfB
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=90.10  E-value=0.28  Score=29.67  Aligned_cols=31  Identities=13%  Similarity=0.028  Sum_probs=23.2

Q ss_pred             CeEEEEccCChh-----hHHHHHHHHhCCCeEEEEEc
Q 046878            8 PKILIFGGTGYL-----GKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga~G~i-----G~~l~~~l~~~~~~v~~~~r   39 (104)
                      |||++++. |.-     ..+|++.|.++||+|+.++.
T Consensus         1 mkil~~~~-gt~Gh~~P~lala~~L~~~Gh~V~~~~~   36 (401)
T d1iira_           1 MRVLLATC-GSRGDTEPLVALAVRVRDLGADVRMCAP   36 (401)
T ss_dssp             CEEEEECC-SCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CEEEEECC-CChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence            47877764 432     34789999999999998874

>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: WrbA-like
domain: Trp repressor binding protein WrbA
species: Deinococcus radiodurans [TaxId: 1299]

Probab=89.54  E-value=0.13  Score=29.14  Aligned_cols=77  Identities=12%  Similarity=-0.008  Sum_probs=41.2

Q ss_pred             CCeEEEE-----ccCChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccc--ccc-cccChHHHHHhhccccEEEEc
Q 046878            7 KPKILIF-----GGTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK--EFQ-ELDEHEKIISILKEVGVVIST   78 (104)
Q Consensus         7 ~~~i~i~-----Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~--~~~-d~~~~~~~~~~~~~~d~vv~~   78 (104)
                      ++||+|+     |-|-.+...+++.+.+.|.++.++.-.+........-....  ... .-++.+.+.+.+.++|.||..
T Consensus         2 ~mkilivy~S~~GnT~~la~~ia~g~~~~G~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~aD~ii~g   81 (201)
T d1ydga_           2 PVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADLEWAEAIVFS   81 (201)
T ss_dssp             CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHHHHCSEEEEE
T ss_pred             CcEEEEEEeCCCcHHHHHHHHHHHHHHhcCCEEEEEEccccCccchhhhhhHhhcCCCcccCchhhhhhhHhhCCEeEEe
Confidence            3577666     44445667777778888999888876543331110000000  000 111222234456788988888


Q ss_pred             ccCcC
Q 046878           79 VAYPQ   83 (104)
Q Consensus        79 a~~~~   83 (104)
                      .+...
T Consensus        82 sPvy~   86 (201)
T d1ydga_          82 SPTRF   86 (201)
T ss_dssp             EEEET
T ss_pred             cceee
Confidence            77653

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.15  E-value=0.64  Score=26.65  Aligned_cols=37  Identities=24%  Similarity=0.266  Sum_probs=24.8

Q ss_pred             CCeEEEEccCChhhHH----HHHHHHhCC-----CeEEEEEcCCCC
Q 046878            7 KPKILIFGGTGYLGKY----MVKASVSSG-----HNTFVYARPVTE   43 (104)
Q Consensus         7 ~~~i~i~Ga~G~iG~~----l~~~l~~~~-----~~v~~~~r~~~~   43 (104)
                      ...++|+||||-+.+.    -...|...|     ..|+++.|++-.
T Consensus        20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s   65 (203)
T d1qkia1          20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLT   65 (203)
T ss_dssp             CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCS
T ss_pred             CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCC
Confidence            4579999999998872    223344444     358888887644

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=88.54  E-value=0.18  Score=27.77  Aligned_cols=36  Identities=6%  Similarity=-0.131  Sum_probs=26.2

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTEN   44 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~   44 (104)
                      +..+|+.+||  ..|.. +..|+++|++|++++.++...
T Consensus        20 ~~~rvLd~GC--G~G~~-a~~la~~G~~V~gvD~S~~~i   55 (201)
T d1pjza_          20 PGARVLVPLC--GKSQD-MSWLSGQGYHVVGAELSEAAV   55 (201)
T ss_dssp             TTCEEEETTT--CCSHH-HHHHHHHCCEEEEEEECHHHH
T ss_pred             CCCEEEEecC--cCCHH-HHHHHHcCCceEeecccHHHH
Confidence            4568999998  34543 446777899999999875443

>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Archaeon Pyrococcus abyssi [TaxId: 29292]

Probab=88.45  E-value=0.15  Score=27.79  Aligned_cols=34  Identities=15%  Similarity=0.104  Sum_probs=26.4

Q ss_pred             CCCCeEEEEccC--ChhhHHHHHHHHhCCCeEEEEE
Q 046878            5 NTKPKILIFGGT--GYLGKYMVKASVSSGHNTFVYA   38 (104)
Q Consensus         5 ~~~~~i~i~Ga~--G~iG~~l~~~l~~~~~~v~~~~   38 (104)
                      +.+.+|+++|=-  +.+...++..+..-|.++.+++
T Consensus         2 l~gl~i~~vGD~~~srV~~Sli~~~~~~g~~~~~~~   37 (157)
T d1ml4a2           2 IDGLKIGLLGDLKYGRTVHSLAEALTFYDVELYLIS   37 (157)
T ss_dssp             SSSEEEEEESCTTTCHHHHHHHHHGGGSCEEEEEEC
T ss_pred             cCCCEEEEEcCCccChHHHHHHHHHHhcCCcEEEEc
Confidence            356789999963  6788899988888888777655

>d1gq2a1 c.2.1.7 (A:280-580) Mitochondrial NAD(P)-dependent malic enzyme {Domestic pigeon (Columba livia) [TaxId: 8932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Domestic pigeon (Columba livia) [TaxId: 8932]

Probab=88.45  E-value=1.6  Score=26.46  Aligned_cols=89  Identities=17%  Similarity=0.162  Sum_probs=46.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC----C-------CeEEEEEcCCCCcc-----cccccccccccccccChHHHHHh
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS----G-------HNTFVYARPVTENS-----RTSKLEIHKEFQELDEHEKIISI   68 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~----~-------~~v~~~~r~~~~~~-----~~~~~~~~~~~~d~~~~~~~~~~   68 (104)
                      ++..++++.|| |.-|..+++.|...    |       .+++++++.---.+     .+.+........+..+.+.+.+.
T Consensus        23 l~d~kiV~~GA-GsAg~gia~~l~~~~~~~G~~~~~a~~~i~l~D~kGlv~~~R~~l~~~k~~~a~~~~~~~~l~~~i~~  101 (298)
T d1gq2a1          23 LSDHTVLFQGA-GEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKGLIVKGRASLTPEKEHFAHEHCEMKNLEDIVKD  101 (298)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTEECBTTCSSCCTTGGGGCBSCCCCCCHHHHHHH
T ss_pred             HHHcEEEEECc-cHHHHHHHHHHHHHHHHcCCChhhccceEEEEeCCCcccCCCcccCHHHHHHHHHhhhhhhhHHHhhc
Confidence            45578999997 99999888887532    2       35888887521110     01111111111133333333333


Q ss_pred             hccccEEEEcccCcChhhHHHHHHHHHH
Q 046878           69 LKEVGVVISTVAYPQLLDQLKIVDAIKV   96 (104)
Q Consensus        69 ~~~~d~vv~~a~~~~~~~~~~l~~~~~~   96 (104)
                      ++ .++++-+.+.+.. .++.+++....
T Consensus       102 vk-ptvliG~s~~~g~-ft~evv~~ma~  127 (298)
T d1gq2a1         102 IK-PTVLIGVAAIGGA-FTQQILQDMAA  127 (298)
T ss_dssp             HC-CSEEEECSCCTTC-SCHHHHHHHHH
T ss_pred             cC-hheeEecccccCc-CCHHHHHHHHh
Confidence            33 6678887775442 22444444433

>d1ulza2 c.30.1.1 (A:1-114) Biotin carboxylase (BC), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Biotin carboxylase (BC), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=88.29  E-value=0.71  Score=24.01  Aligned_cols=88  Identities=16%  Similarity=0.228  Sum_probs=55.7

Q ss_pred             CeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCCCcccc----ccccccc--ccccccChHHHHHhhc--cccEEEEcc
Q 046878            8 PKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVTENSRT----SKLEIHK--EFQELDEHEKIISILK--EVGVVISTV   79 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~----~~~~~~~--~~~d~~~~~~~~~~~~--~~d~vv~~a   79 (104)
                      +|++|.-- |=++..+++.+.+.|.+.+++..........    +..-.+.  ....|.|.+.+.+...  ++|.|.  .
T Consensus         3 kkvLIANR-GEiA~Ri~ra~~elgi~tvav~s~~D~~s~~~~~ad~~~~ig~~~~~sYln~~~Ii~~A~~~~~daih--P   79 (114)
T d1ulza2           3 NKVLVANR-GEIAVRIIRACKELGIPTVAIYNEVESTARHVKLADEAYMIGTDPLDTYLNKQRIINLALEVGADAIH--P   79 (114)
T ss_dssp             SSEEECCC-HHHHHHHHHHHHHHTCCEEEEECGGGTTCHHHHHSSEEEECCSSTTHHHHCHHHHHHHHHHTTCCEEE--C
T ss_pred             ceeeEecC-CHHHHHHHHHHHHhcCCeEEEecchhhcCcchhhcceeeecCCChhhhhhcHHHHHHHHHHhCCCeEe--c
Confidence            58999885 9999999999999998766665443322110    0001111  1125777777777654  567664  4


Q ss_pred             cCcChhhHHHHHHHHHHhC
Q 046878           80 AYPQLLDQLKIVDAIKVAG   98 (104)
Q Consensus        80 ~~~~~~~~~~l~~~~~~~~   98 (104)
                      |+..+-....+++++.+++
T Consensus        80 GyGFLSEna~Fa~~~~~~g   98 (114)
T d1ulza2          80 GYGFLAENAEFAKMCEEAG   98 (114)
T ss_dssp             CSSTTTTCHHHHHHHHHTT
T ss_pred             chhhhhhHHHHHHHHHHCC
Confidence            5555545568888888876

>d1ju2a1 c.3.1.2 (A:1-293,A:464-521) Hydroxynitrile lyase {Almond (Prunus dulcis) [TaxId: 3755]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Hydroxynitrile lyase
species: Almond (Prunus dulcis) [TaxId: 3755]

Probab=88.14  E-value=0.27  Score=30.27  Aligned_cols=30  Identities=23%  Similarity=0.314  Sum_probs=25.9

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      ++|+|+ |.-|..+|..|.++ ++|.++-+..
T Consensus        29 ~IIVGs-G~aG~vlA~rLae~-~kVLvLEaG~   58 (351)
T d1ju2a1          29 YVIVGG-GTSGCPLAATLSEK-YKVLVLERGS   58 (351)
T ss_dssp             EEEECC-STTHHHHHHHHTTT-SCEEEECSSB
T ss_pred             EEEECc-cHHHHHHHHHhcCC-CCEEEEecCC
Confidence            789996 99999999999876 8999998764

>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: D-Alanine ligase N-terminal domain
domain: D-Ala-D-Ala ligase, N-domain
species: Escherichia coli, gene ddlB [TaxId: 562]

Probab=87.61  E-value=0.93  Score=22.67  Aligned_cols=33  Identities=18%  Similarity=0.253  Sum_probs=23.9

Q ss_pred             CeEEEEccCChh---------hHHHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIFGGTGYL---------GKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga~G~i---------G~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +||+|+-+ |+.         |+++.+.|.+.++++..++...
T Consensus         3 ~kI~vl~G-G~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~   44 (96)
T d1iowa1           3 DKIAVLLG-GTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE   44 (96)
T ss_dssp             CEEEEECC-CSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred             ceEEEEeC-cCchhhHhHHhhHHHHHHHHHHcCeeEeeecCcc
Confidence            36766654 443         7888899999999988776544

>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Escherichia coli [TaxId: 562]

Probab=87.42  E-value=0.26  Score=26.94  Aligned_cols=34  Identities=12%  Similarity=0.117  Sum_probs=22.6

Q ss_pred             CCCCeEEEEccCC--hhhHHHHHHHHhCCCeEEEEE
Q 046878            5 NTKPKILIFGGTG--YLGKYMVKASVSSGHNTFVYA   38 (104)
Q Consensus         5 ~~~~~i~i~Ga~G--~iG~~l~~~l~~~~~~v~~~~   38 (104)
                      +.+.+|+++|=..  .+...++..+..-|.....+.
T Consensus         2 l~gl~i~~vGD~~nsrv~~Sli~~l~~~~~~~~~~~   37 (160)
T d1ekxa2           2 LDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFI   37 (160)
T ss_dssp             SSSCEEEEESCTTTCHHHHHHHHHHTTSSSCEEEEE
T ss_pred             CCCCEEEEEcCCCccHHHHHHHHHHHHcCCCeEEee
Confidence            3467899999633  378888888777764443333

>d1rtta_ c.23.5.4 (A:) Hypothetical protein PA1204 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: NADPH-dependent FMN reductase
domain: Hypothetical protein PA1204
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.30  E-value=0.74  Score=25.41  Aligned_cols=84  Identities=7%  Similarity=-0.008  Sum_probs=43.4

Q ss_pred             CeEEEEccCC---hhhHHHHHHHHh---CCCeEEEEEcCCCCcccccccccccccccccChHHHHHhhccccEEEEcccC
Q 046878            8 PKILIFGGTG---YLGKYMVKASVS---SGHNTFVYARPVTENSRTSKLEIHKEFQELDEHEKIISILKEVGVVISTVAY   81 (104)
Q Consensus         8 ~~i~i~Ga~G---~iG~~l~~~l~~---~~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~vv~~a~~   81 (104)
                      |||+++.||-   ...+.+++.+.+   .|+++..++-..-..  ... +... .....+.+.+.+.+..+|.+|.+.+.
T Consensus         1 MKIl~i~GS~r~~s~s~~l~~~~~~~~~~~~ev~~idl~dlP~--~~~-d~~~-~~~~~~~~~~~~~i~~aD~iii~sP~   76 (174)
T d1rtta_           1 IKVLGISGSLRSGSYNSAALQEAIGLVPPGMSIELADISGIPL--YNE-DVYA-LGFPPAVERFREQIRAADALLFATPE   76 (174)
T ss_dssp             CEEEEEESCCSTTCHHHHHHHHHHTTCCTTCEEEECCCTTCCC--CCH-HHHT-TCCCHHHHHHHHHHHHCSEEEEECCE
T ss_pred             CEEEEEECCCCCCCHHHHHHHHHHHhcCCCCEEEEEecccCCC--ccc-cccc-cCCCHHHHHHHHHhhcCCeEEEEccc
Confidence            3565554432   234556655543   356676665432111  110 0000 00112345666777889999999987


Q ss_pred             cC---hhhHHHHHHHHH
Q 046878           82 PQ---LLDQLKIVDAIK   95 (104)
Q Consensus        82 ~~---~~~~~~l~~~~~   95 (104)
                      ..   .-..+++++.+.
T Consensus        77 y~~s~~~~lKn~iD~l~   93 (174)
T d1rtta_          77 YNYSMAGVLKNAIDWAS   93 (174)
T ss_dssp             ETTEECHHHHHHHHHHT
T ss_pred             hhccccHHHHHHHHHHh
Confidence            54   223467777764

>d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Escherichia coli [TaxId: 562]

Probab=87.27  E-value=1.2  Score=23.37  Aligned_cols=34  Identities=18%  Similarity=0.261  Sum_probs=28.3

Q ss_pred             CCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878            6 TKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      +..++++-|-||..|+.-++.+++-|.++.+-..
T Consensus         5 k~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVt   38 (119)
T d2nu7a1           5 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVT   38 (119)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             CCCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEc
Confidence            3468999999999999999999998888765443

>d1t0ia_ c.23.5.4 (A:) Hypothetical protein Ylr011wp {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: NADPH-dependent FMN reductase
domain: Hypothetical protein Ylr011wp
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=87.00  E-value=1.5  Score=24.31  Aligned_cols=33  Identities=6%  Similarity=0.104  Sum_probs=21.3

Q ss_pred             hHHHHHhhccccEEEEcccCcC---hhhHHHHHHHH
Q 046878           62 HEKIISILKEVGVVISTVAYPQ---LLDQLKIVDAI   94 (104)
Q Consensus        62 ~~~~~~~~~~~d~vv~~a~~~~---~~~~~~l~~~~   94 (104)
                      .+.+.+.+..+|.+|...+...   .-..+++++.+
T Consensus        75 ~~~~~~~i~~AD~iIi~tP~Y~~~~~~~lK~~iD~~  110 (185)
T d1t0ia_          75 TRSWSRIVNALDIIVFVTPQYNWGYPAALKNAIDRL  110 (185)
T ss_dssp             HHHHHHHHHTCSEEEEEEECBTTBCCHHHHHHHHTC
T ss_pred             HHHHHHHHHhCCCeEEEEeeecCCCcHHHHHHHHHh
Confidence            3456667889999999988765   12234555543

>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.50  E-value=0.36  Score=27.13  Aligned_cols=73  Identities=15%  Similarity=0.110  Sum_probs=43.1

Q ss_pred             CCCCeEEEEc-cCChhhHHHHHHHHhCCCeEEEEEcCCCCcccccc-cccccc----c-ccccChHHHHHhhccccEEEE
Q 046878            5 NTKPKILIFG-GTGYLGKYMVKASVSSGHNTFVYARPVTENSRTSK-LEIHKE----F-QELDEHEKIISILKEVGVVIS   77 (104)
Q Consensus         5 ~~~~~i~i~G-a~G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~-~~~~~~----~-~d~~~~~~~~~~~~~~d~vv~   77 (104)
                      ++..+|+.+| +...+...++..+..-|.++++++=.  ....... ......    . ..+.-.+++.++++++|+|+.
T Consensus         3 l~~lkia~vGD~~nnV~~Sli~~~~~~G~~l~l~~P~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eai~~aDvVyt   80 (185)
T d1dxha2           3 LHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPK--ALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHT   80 (185)
T ss_dssp             GGGCEEEEESCCSSHHHHHHHHHHHHTTCEEEEECCG--GGSCCHHHHHHHHHHHHHHTCEEEEESCHHHHTTTCSEEEE
T ss_pred             CCCCEEEEEcCCcchHHHHHHHHHHHcCCEEEEEccH--HHHhhhHHHHHHHHHhhccCCeEEEEeChhhccccccEEEe
Confidence            4567899999 32478899998888888888776532  2211110 010000    0 012223446788899998876


Q ss_pred             cc
Q 046878           78 TV   79 (104)
Q Consensus        78 ~a   79 (104)
                      ..
T Consensus        81 ~~   82 (185)
T d1dxha2          81 DV   82 (185)
T ss_dssp             CC
T ss_pred             eh
Confidence            55

>d1sqsa_ c.23.5.5 (A:) Hypothetical protein SP1951 {(Streptococcus pneumoniae) [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Hypothetical protein SP1951
domain: Hypothetical protein SP1951
species: (Streptococcus pneumoniae) [TaxId: 1313]

Probab=86.45  E-value=1.8  Score=24.85  Aligned_cols=36  Identities=19%  Similarity=0.215  Sum_probs=24.7

Q ss_pred             cChHHHHHhhccccEEEEcccCcC---hhhHHHHHHHHH
Q 046878           60 DEHEKIISILKEVGVVISTVAYPQ---LLDQLKIVDAIK   95 (104)
Q Consensus        60 ~~~~~~~~~~~~~d~vv~~a~~~~---~~~~~~l~~~~~   95 (104)
                      .+.+.+.+.+.++|.+|..++...   .....++++.+.
T Consensus        68 d~~~~i~~~i~~AD~iI~~sP~y~~~~s~~lK~~iDr~~  106 (232)
T d1sqsa_          68 DDGGVIKKELLESDIIIISSPVYLQNVSVDTKNFIERIG  106 (232)
T ss_dssp             STHHHHHHHHHHCSEEEEEEEECSSSCCHHHHHHHHHTG
T ss_pred             HHHHHHHHHHHhCCEEEEEeccccCcchHHHHHHHHHhH
Confidence            446677888889999999998754   223356666554

>d1o0sa1 c.2.1.7 (A:296-603) Mitochondrial NAD(P)-dependent malic enzyme {Pig roundworm (Ascaris suum) [TaxId: 6253]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Mitochondrial NAD(P)-dependent malic enzyme
species: Pig roundworm (Ascaris suum) [TaxId: 6253]

Probab=86.16  E-value=2.4  Score=25.87  Aligned_cols=88  Identities=14%  Similarity=0.271  Sum_probs=47.2

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhC----C-------CeEEEEEcCCCC----cc-cccccccccccccccChHHHHHh
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSS----G-------HNTFVYARPVTE----NS-RTSKLEIHKEFQELDEHEKIISI   68 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~----~-------~~v~~~~r~~~~----~~-~~~~~~~~~~~~d~~~~~~~~~~   68 (104)
                      ++..+|++.|+ |.-|..+++.|...    |       .+++++++.-.-    .+ .+.+....   .+..+..++.++
T Consensus        23 l~d~kivi~GA-GaAg~gia~~l~~~~~~~G~~~~~a~~~i~~vD~~Glv~~~r~d~~~~k~~~a---~~~~~~~~l~~~   98 (308)
T d1o0sa1          23 VSQEKYLFFGA-GAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDGLVTKNRKEMNPRHVQFA---KDMPETTSILEV   98 (308)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTEECBTTCSSCCGGGTTTC---BSSCCCCCHHHH
T ss_pred             HHHcEEEEECc-CHHHHHHHHHHHHHHHhcCCchhhhhceEEEEeCCCCccCCCcccCHHHHHHH---HhcccCCcHHHH
Confidence            45578999997 99999988877543    3       148888874111    10 11111111   133333344554


Q ss_pred             hc--cccEEEEcccCcChhhHHHHHHHHHHh
Q 046878           69 LK--EVGVVISTVAYPQLLDQLKIVDAIKVA   97 (104)
Q Consensus        69 ~~--~~d~vv~~a~~~~~~~~~~l~~~~~~~   97 (104)
                      ++  ..++++-+.+.... .++.+++...+.
T Consensus        99 i~~~kptvliG~s~~~g~-ft~evv~~Ma~~  128 (308)
T d1o0sa1          99 IRAARPGALIGASTVRGA-FNEEVIRAMAEI  128 (308)
T ss_dssp             HHHHCCSEEEECSSCTTC-SCHHHHHHHHHH
T ss_pred             HhccccccEEecccccCC-CCHHHHHHHHhh
Confidence            44  34678877775442 124555554433

>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-vancosaminyltransferase GftD
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=86.07  E-value=0.6  Score=28.25  Aligned_cols=32  Identities=22%  Similarity=0.190  Sum_probs=22.1

Q ss_pred             CeEEEEcc-C-Chh--hHHHHHHHHhCCCeEEEEEc
Q 046878            8 PKILIFGG-T-GYL--GKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         8 ~~i~i~Ga-~-G~i--G~~l~~~l~~~~~~v~~~~r   39 (104)
                      |||+++.. | |.+  -.++++.|.++||+|++++.
T Consensus         1 mrIl~~~~gt~Ghv~P~l~lA~~L~~rGh~V~~~t~   36 (401)
T d1rrva_           1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAP   36 (401)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             CeEEEECCCChhHHHHHHHHHHHHHHCCCEEEEEEC
Confidence            46766643 2 222  33788999999999998875

>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Aspartate carbamoyltransferase catalytic subunit
species: Bacillus subtilis [TaxId: 1423]

Probab=85.58  E-value=0.52  Score=25.60  Aligned_cols=34  Identities=9%  Similarity=0.105  Sum_probs=26.7

Q ss_pred             CCCeEEEEcc--CChhhHHHHHHHHhCCCeEEEEEc
Q 046878            6 TKPKILIFGG--TGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         6 ~~~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      ++.+|+++|-  .+.+...++..+..-|.++.+++-
T Consensus         2 ~gl~i~~vGD~~~srv~~Sl~~~~~~~g~~~~i~~P   37 (151)
T d2at2a2           2 KGLTVSIHGDIKHSRVARSNAEVLTRLGARVLFSGP   37 (151)
T ss_pred             CCCEEEEEcCCCCCHHHHHHHHHHHHcCCcccccCC
Confidence            4578999997  466999999999888888766543

>d1jnra2 c.3.1.4 (A:2-256,A:402-502) Adenylylsulfate reductase A subunit {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Adenylylsulfate reductase A subunit
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=85.52  E-value=0.67  Score=27.98  Aligned_cols=32  Identities=25%  Similarity=0.418  Sum_probs=25.0

Q ss_pred             eEEEEccCChhhHHHHHHHH----hCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASV----SSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~----~~~~~v~~~~r~~   41 (104)
                      -|+|+|+ |.-|...+-.+.    +.|.+|.++.+.+
T Consensus        23 DVlIIG~-G~AGl~AA~~aa~~~~~~G~~V~vieK~~   58 (356)
T d1jnra2          23 DILIIGG-GFSGCGAAYEAAYWAKLGGLKVTLVEKAA   58 (356)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHTTTTCCEEEECSSC
T ss_pred             CEEEECC-CHHHHHHHHHHHHHHHhCcCEEEEEeCCC
Confidence            3899996 999987776664    3688999998754

>d2qwxa1 c.23.5.3 (A:1-230) Quinone reductase type 2 (menadione reductase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Quinone reductase
domain: Quinone reductase type 2 (menadione reductase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.27  E-value=2.1  Score=24.35  Aligned_cols=76  Identities=14%  Similarity=0.056  Sum_probs=40.5

Q ss_pred             CeEEEE-ccC------ChhhHHHHHHHHhCCCeEEEEEcCCCCccccccccccc-cc----------------c---ccc
Q 046878            8 PKILIF-GGT------GYLGKYMVKASVSSGHNTFVYARPVTENSRTSKLEIHK-EF----------------Q---ELD   60 (104)
Q Consensus         8 ~~i~i~-Ga~------G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~~~~~~~~-~~----------------~---d~~   60 (104)
                      |||+|+ |..      ..+...+++.+.++|++|..++-.....+......... ..                .   -..
T Consensus         3 mKiLiI~ghp~~~S~t~~l~~~~~~~~~~~g~ev~~~dL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (230)
T d2qwxa1           3 KKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLAS   82 (230)
T ss_dssp             CEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTCBCH
T ss_pred             CEEEEEEeCCCCccHHHHHHHHHHHHHHhCCCEEEEEEccccCCcccchHHHhhhccCchhhhcchhhhhhhhhcccccH
Confidence            566555 432      23444566667778899988876544431111100000 00                0   011


Q ss_pred             ChHHHHHhhccccEEEEcccCcC
Q 046878           61 EHEKIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus        61 ~~~~~~~~~~~~d~vv~~a~~~~   83 (104)
                      +...+.+.+..+|.||...+...
T Consensus        83 di~~~~~~l~~AD~iv~~~P~y~  105 (230)
T d2qwxa1          83 DITDEQKKVREADLVIFQFPLYW  105 (230)
T ss_dssp             HHHHHHHHHHHCSEEEEEEECBT
T ss_pred             HHHHHHHHHHhCCEEEEEeCccc
Confidence            23355566788999999888654

>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.19  E-value=0.35  Score=26.67  Aligned_cols=36  Identities=6%  Similarity=-0.022  Sum_probs=22.7

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      +++.+|+++|-...+-..+++.+..-|.++.+++-.
T Consensus         2 l~gl~I~~vGD~~nV~~Sli~~~~~~g~~~~~~~P~   37 (170)
T d1otha2           2 LKGLTLSWIGDGNNILHSIMMSAAKFGMHLQAATPK   37 (170)
T ss_dssp             CTTCEEEEESCSSHHHHHHHTTTGGGTCEEEEECCT
T ss_pred             CCCCEEEEEcCchhHHHHHHHHHHHcCCEEEEEecc
Confidence            466899999974444445554444557777766643

>d1chua2 c.3.1.4 (A:2-237,A:354-422) L-aspartate oxidase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: L-aspartate oxidase
species: Escherichia coli [TaxId: 562]

Probab=85.10  E-value=0.55  Score=27.97  Aligned_cols=31  Identities=19%  Similarity=0.307  Sum_probs=25.2

Q ss_pred             eEEEEccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      -|+|+|+ |.-|...+..+.+.+ +|.++...+
T Consensus         9 DVvVVG~-G~AGl~AA~~a~~~g-~V~llEK~~   39 (305)
T d1chua2           9 DVLIIGS-GAAGLSLALRLADQH-QVIVLSKGP   39 (305)
T ss_dssp             SEEEECC-SHHHHHHHHHHTTTS-CEEEECSSC
T ss_pred             CEEEECc-cHHHHHHHHHhhcCC-CEEEEECCC
Confidence            4899996 999988888877777 888887754

>d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: CoA-transferase family III (CaiB/BaiF)
superfamily: CoA-transferase family III (CaiB/BaiF)
family: CoA-transferase family III (CaiB/BaiF)
domain: Hypothetical protein YfdW
species: Escherichia coli [TaxId: 562]

Probab=84.90  E-value=3  Score=25.90  Aligned_cols=82  Identities=13%  Similarity=0.181  Sum_probs=49.5

Q ss_pred             CCCCCCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEcCCC-Cccc---c---cc----cccc----ccc-ccccChH-
Q 046878            1 MEGENTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYARPVT-ENSR---T---SK----LEIH----KEF-QELDEHE-   63 (104)
Q Consensus         1 m~~~~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~~~-~~~~---~---~~----~~~~----~~~-~d~~~~~-   63 (104)
                      |+..+...+|+=++. ...|-...+.|.+.|.+|+=+-+... ....   +   ..    ....    ..+ -|+.+++ 
T Consensus         1 m~~PL~GirVld~~~-~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~nr~K~si~lDL~~~~g   79 (417)
T d1q7ea_           1 LSTPLQGIKVLDFTG-VQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEG   79 (417)
T ss_dssp             CCCTTTTCEEEECCC-TTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTCTTCEEEECCTTSHHH
T ss_pred             CCCCCCCCEEEEcCC-hhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCCCCccHHHHHhCCCCeEEEEeCcCHHH
Confidence            777788777777663 55566666677788999988775321 1100   0   00    0000    001 1666644 


Q ss_pred             --HHHHhhccccEEEEcccCcC
Q 046878           64 --KIISILKEVGVVISTVAYPQ   83 (104)
Q Consensus        64 --~~~~~~~~~d~vv~~a~~~~   83 (104)
                        .+.++++.+|++|++..+..
T Consensus        80 ~~~~~~Li~~aDv~i~n~~pg~  101 (417)
T d1q7ea_          80 KEVMEKLIREADILVENFHPGA  101 (417)
T ss_dssp             HHHHHHHHHHCSEEEECCCC--
T ss_pred             HHHHHHHHhcCcccEeccCCCc
Confidence              66678899999999988765

>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}

class: Alpha and beta proteins (a/b)
fold: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
superfamily: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
family: Homo-oligomeric flavin-containing Cys decarboxylases, HFCD
domain: MrsD
species: Bacillus sp. hil-y85/54728 [TaxId: 69002]

Probab=84.83  E-value=0.63  Score=26.25  Aligned_cols=34  Identities=18%  Similarity=0.043  Sum_probs=22.6

Q ss_pred             CCCeEEEEccCChhh----HHHHHHHHhCCCeEEEEEcC
Q 046878            6 TKPKILIFGGTGYLG----KYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus         6 ~~~~i~i~Ga~G~iG----~~l~~~l~~~~~~v~~~~r~   40 (104)
                      ++++|+ +|.||.++    ..+++.|.+.|++|.++-..
T Consensus         5 ~~KkIl-lgvTGsiaa~k~~~l~~~L~~~g~eV~vv~T~   42 (183)
T d1p3y1_           5 KDKKLL-IGICGSISSVGISSYLLYFKSFFKEIRVVMTK   42 (183)
T ss_dssp             GGCEEE-EEECSCGGGGGTHHHHHHHTTTSSEEEEEECH
T ss_pred             CCCEEE-EEEeCHHHHHHHHHHHHHHHHCCCeEEEEEEc
Confidence            455655 56677665    36677777888888776544

>d2cula1 c.3.1.7 (A:2-231) GidA-related protein TTHA1897 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GidA-like
domain: GidA-related protein TTHA1897
species: Thermus thermophilus [TaxId: 274]

Probab=84.46  E-value=1  Score=26.32  Aligned_cols=30  Identities=20%  Similarity=0.294  Sum_probs=26.9

Q ss_pred             EEEEccCChhhHHHHHHHHhCCCeEEEEEcC
Q 046878           10 ILIFGGTGYLGKYMVKASVSSGHNTFVYARP   40 (104)
Q Consensus        10 i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r~   40 (104)
                      |+|+|| |.-|...+-...+.|.++.+++.+
T Consensus         5 VIVIGg-G~AG~eAA~~aAR~G~ktllit~~   34 (230)
T d2cula1           5 VLIVGA-GFSGAETAFWLAQKGVRVGLLTQS   34 (230)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEEec
Confidence            789997 999999999999999998888765

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=83.01  E-value=2.1  Score=22.57  Aligned_cols=34  Identities=18%  Similarity=0.187  Sum_probs=23.0

Q ss_pred             CeEEEE-----ccCChhhHHHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIF-----GGTGYLGKYMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~-----Ga~G~iG~~l~~~l~~~~~~v~~~~r~~   41 (104)
                      .|++|+     |-|-.+...+++.|.+.|.++.+..-..
T Consensus         4 ~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~   42 (148)
T d1vmea1           4 GKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSD   42 (148)
T ss_dssp             TEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred             CEEEEEEECCCcHHHHHHHHHHHHHHhCCCeEEEEeccc
Confidence            466665     4444567788888888898887765443

>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Molybdopterin-guanine dinucleotide biosynthesis protein MobB
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.57  E-value=2  Score=22.95  Aligned_cols=33  Identities=21%  Similarity=0.081  Sum_probs=22.8

Q ss_pred             CeEEEEccCChhhH-----HHHHHHHhCCCeEEEEEcCC
Q 046878            8 PKILIFGGTGYLGK-----YMVKASVSSGHNTFVYARPV   41 (104)
Q Consensus         8 ~~i~i~Ga~G~iG~-----~l~~~l~~~~~~v~~~~r~~   41 (104)
                      +-+.|+|.. ..|+     .+++.|..+|+.|.++-...
T Consensus         2 kii~I~G~~-gSGKTTli~~l~~~L~~~g~~v~vik~d~   39 (165)
T d1xjca_           2 NVWQVVGYK-HSGKTTLMEKWVAAAVREGWRVGTVKHHG   39 (165)
T ss_dssp             CEEEEECCT-TSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             cEEEEEeCC-CCCHHHHHHHHHHHHHhCCCeEEEEEecc
Confidence            456788863 4444     66777778899988876554

>d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain
species: Thermus thermophilus [TaxId: 274]

Probab=82.49  E-value=2.1  Score=22.38  Aligned_cols=35  Identities=23%  Similarity=0.376  Sum_probs=28.8

Q ss_pred             CCCCeEEEEccCChhhHHHHHHHHhCCCeEEEEEc
Q 046878            5 NTKPKILIFGGTGYLGKYMVKASVSSGHNTFVYAR   39 (104)
Q Consensus         5 ~~~~~i~i~Ga~G~iG~~l~~~l~~~~~~v~~~~r   39 (104)
                      .+..|+++-|-||..|+.-++.+++-|.++.+-..
T Consensus         5 ~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVt   39 (121)
T d1oi7a1           5 NRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVT   39 (121)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC
T ss_pred             cCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeee
Confidence            34568999999999999999999998888765443

>d1jeoa_ c.80.1.3 (A:) Probable 3-hexulose-6-phosphate isomerase MJ1247 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: SIS domain
superfamily: SIS domain
family: mono-SIS domain
domain: Probable 3-hexulose-6-phosphate isomerase MJ1247
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=81.93  E-value=2.1  Score=23.47  Aligned_cols=29  Identities=31%  Similarity=0.705  Sum_probs=20.5

Q ss_pred             CeEEEEcc--CChhhHHHHHHHHhCCCeEEE
Q 046878            8 PKILIFGG--TGYLGKYMVKASVSSGHNTFV   36 (104)
Q Consensus         8 ~~i~i~Ga--~G~iG~~l~~~l~~~~~~v~~   36 (104)
                      ++|.++|.  ++.++..++..|..-|.++..
T Consensus        38 ~~I~~~G~G~S~~~a~~~~~~l~~lg~~~~~   68 (177)
T d1jeoa_          38 KKIFIFGVGRSGYIGRCFAMRLMHLGFKSYF   68 (177)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CeEEEEEccHHHHHHHHHHHHHHhcCCcccc
Confidence            57888884  455677777778887876544

>d1kf6a2 c.3.1.4 (A:0-225,A:358-442) Fumarate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Escherichia coli [TaxId: 562]

Probab=81.41  E-value=1.2  Score=26.68  Aligned_cols=32  Identities=16%  Similarity=0.201  Sum_probs=25.9

Q ss_pred             eEEEEccCChhhHHHHHHHHhC--CCeEEEEEcCC
Q 046878            9 KILIFGGTGYLGKYMVKASVSS--GHNTFVYARPV   41 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~l~~~l~~~--~~~v~~~~r~~   41 (104)
                      -|+|+|+ |.-|...+-.+.+.  |.+|.++...+
T Consensus         7 DVlVIG~-G~AGl~AA~~a~~~~~g~~V~lleK~~   40 (311)
T d1kf6a2           7 DLAIVGA-GGAGLRAAIAAAQANPNAKIALISKVY   40 (311)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred             CEEEECc-cHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence            4899996 99999988888876  45799888654

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=80.98  E-value=2.9  Score=23.52  Aligned_cols=35  Identities=31%  Similarity=0.340  Sum_probs=22.2

Q ss_pred             eEEEEccCChhhHH----HHHHHHhCC-----CeEEEEEcCCCC
Q 046878            9 KILIFGGTGYLGKY----MVKASVSSG-----HNTFVYARPVTE   43 (104)
Q Consensus         9 ~i~i~Ga~G~iG~~----l~~~l~~~~-----~~v~~~~r~~~~   43 (104)
                      .++|+||||-+.+.    -...|...|     ..++++.|++..
T Consensus         7 ~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~   50 (195)
T d1h9aa1           7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALN   50 (195)
T ss_dssp             EEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCC
T ss_pred             EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCc
Confidence            35578999999873    222333444     358888887644

>d1mv8a3 c.26.3.1 (A:301-436) GDP-mannose 6-dehydrogenase, GDP-binding domain {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
family: UDP-glucose/GDP-mannose dehydrogenase C-terminal domain
domain: GDP-mannose 6-dehydrogenase, GDP-binding domain
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.74  E-value=2.5  Score=22.09  Aligned_cols=79  Identities=9%  Similarity=0.029  Sum_probs=44.4

Q ss_pred             CCCCeEEEEccC---------ChhhHHHHHHHHhCCCeEEEEEcCCCCcccc-cccccc-cccc--cccChHHHHHhhcc
Q 046878            5 NTKPKILIFGGT---------GYLGKYMVKASVSSGHNTFVYARPVTENSRT-SKLEIH-KEFQ--ELDEHEKIISILKE   71 (104)
Q Consensus         5 ~~~~~i~i~Ga~---------G~iG~~l~~~l~~~~~~v~~~~r~~~~~~~~-~~~~~~-~~~~--d~~~~~~~~~~~~~   71 (104)
                      ...++|+|.|.+         +.-...+++.|...|.+|.+.+-.-+..... ...... ....  ...-.+++.+++.+
T Consensus        11 ~~~kkI~ilGlafK~~t~D~R~Sps~~li~~L~~~g~~V~~~DP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~i~~   90 (136)
T d1mv8a3          11 HDTRKVGLLGLSFKAGTDDLRESPLVELAEMLIGKGYELRIFDRNVEYARVHGANKEYIESKIPHVSSLLVSDLDEVVAS   90 (136)
T ss_dssp             SSCCEEEEECCSSSTTCCCCTTCHHHHHHHHHHHTTCEEEEECHHHHHHTTSSSCHHHHHHTSHHHHTTBCSCHHHHHHH
T ss_pred             cCCCEEEEEEEEECCCCcchhcCHHHHHHHHHhhhhccccccCCCCCHHHHhhhhhhhhhhccccccceeehhhhhhhhh
Confidence            345789999974         2235689999999999988765311100000 000000 0000  11122355777889


Q ss_pred             ccEEEEcccCcC
Q 046878           72 VGVVISTVAYPQ   83 (104)
Q Consensus        72 ~d~vv~~a~~~~   83 (104)
                      +|+|+.+..-..
T Consensus        91 ~D~ivi~t~h~~  102 (136)
T d1mv8a3          91 SDVLVLGNGDEL  102 (136)
T ss_dssp             CSEEEECSCCGG
T ss_pred             ceEEEEEeCCHH
Confidence            999998887554