Citrus Sinensis ID: 046940

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220--
Protein Sequence
MALLDIVSYSQQTSATRNNNLSAYSISAGRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKCGTSSKTQKANQSAAESPLKETV
Secondary Structure (PSIPRED)
cccccEEEEEccccccccccccHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHcccccccccEEEEEccccccccccccccccccccEEEEcccccccccccccccccccccccccccccEEEEEEEEEEEccccccccccccEEEEEcccccccccccccccccccccccccEEEEEEEEEcccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccEEEEEEEccccccccccHccccccccEEEEEcHHHHHHHHHcccEEEccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEccccccccccccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MALLDIVSYSQqtsatrnnnlsaysisagrgsnqddeqynlplgyrfsprgnELITHYLIKKisgqqlpanIIREidlyafdphqlpisefkygkpdeayfftrpgkrrrtssgywkptgrdlpilsgkaiVGFKRILIFYkgkaprgiktpwvvhefrvnplYFSAIRRNKLDEDVNAKVESYIACKIRYkrqrqsdkcgtssktqkanqsaaesplketv
Flexible Loop (DISEMBL)
MALLDIVSYSQQtsatrnnnlSAYSISAGRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPisefkygkpdeayfftrpgkrrrtssgywkptgrdlpilsgkaiVGFKRILIFYKGkaprgiktpwvvheFRVNPLYFSAirrnkldedvnakvesyiackirykrqrqsdkcgtssktqkanqsaaesplketv
Low Complexity Region (SEG)
MALLDIVSYSQQTSATRNNNLSAYSISAGRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKCGTSSKTQKANQSAAESPLKETV
Disordered region (IsUnstruct)
**************************************YNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPG*****SSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRY*******************************
Disordered Region (DISOPRED)
*******************************************GYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPL*******************SYIACKIR********************************
Disordered Region (DISEMBL)
MALLDIVSYSQQTSATRNNNLSAYSISAGRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRY*******************************
Disordered Region (DISPRO)
*ALLDIVSYS*****************************NLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNP***************NAKVESYIACKIRYKRQ****************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALLDIVSYSQQTSATRNNNLSAYSISAGRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKCGTSSKTQKANQSAAESPLKETV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	222	2.2.26 [Sep-21-2011]
O49255	268	NAC transcription factor	yes	no	0.666	0.552	0.4	4e-27
Q8GY42	323	NAC transcription factor	no	no	0.662	0.455	0.401	5e-27
Q52QH4	318	NAC domain-containing pro	no	no	0.707	0.493	0.387	5e-27
A0SPJ8	406	NAC transcription factor	N/A	no	0.774	0.423	0.343	6e-27
D2SMN4	406	NAC transcription factor	N/A	no	0.774	0.423	0.343	6e-27
Q8H4S4	425	NAC transcription factor	no	no	0.806	0.421	0.355	1e-26
A2YMR0	425	NAC transcription factor	N/A	no	0.806	0.421	0.341	1e-26
A0SPJ6	396	NAC transcription factor	N/A	no	0.698	0.391	0.381	2e-26
Q9FLJ2	336	NAC domain-containing pro	no	no	0.581	0.383	0.437	3e-26
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.662	0.519	0.391	4e-26

>sp|O49255|NAC29_ARATH NAC transcription factor 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1

 Score =  121 bits (304), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 100/165 (60%), Gaps = 17/165 (10%)

Query: 38  QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
           Q  LP G+RF P   ELI +YL  +   +  P +II E+D+Y FDP QLP  + ++G+ +
Sbjct: 6   QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLP-EKTEFGE-N 63

Query: 98  EAYFFTRPGKR---------RRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRG 148
           E YFF+ P +R         R   SGYWK TG D  I SG + VG K+ L+FYKG+ P+G
Sbjct: 64  EWYFFS-PRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKG 122

Query: 149 IKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           IKT W++HE+R++    ++ +RN      + +++ ++ C+I  KR
Sbjct: 123 IKTDWIMHEYRLHDSRKASTKRNG-----SMRLDEWVLCRIYKKR 162

May function in the transition between active cell division and cell expansion.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  120 bits (302), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/177 (40%), Positives = 98/177 (55%), Gaps = 30/177 (16%)

Query: 40  NLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEA 99
           +LP G+RF P   EL+ HYL KK     LP +II EIDLY FDP +LP S+  +G+  E 
Sbjct: 15  HLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELP-SKASFGE-HEW 72

Query: 100 YFFT----------RPGKRRRTSSGYWKPTGRDLPILSGKAI-VGFKRILIFYKGKAPRG 148
           YFF+          RP   R  +SGYWK TG D PI +  +  VG K+ L+FY GK P+G
Sbjct: 73  YFFSPRDRKYPNGVRP--NRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKG 130

Query: 149 IKTPWVVHEFRVN---------PLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQ 196
           IKT W++HE+R+          P   +  R+N L      +++ ++ C+I  K   Q
Sbjct: 131 IKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSL------RLDDWVLCRIYKKNSSQ 181

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  120 bits (302), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 69/178 (38%), Positives = 97/178 (54%), Gaps = 21/178 (11%)

Query: 28  AGRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLP 87
            G G    + + NLP G+RF P   EL+ HYL +K++ Q LP  II E+DLY  DP  LP
Sbjct: 8   GGSGRRDAEAELNLPPGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLP 67

Query: 88  ISEFKYGKPDEAYFFT----------RPGKRRRTSSGYWKPTGRDLPIL-SGKA-IVGFK 135
                +G+  E YFFT          RP   R    GYWK TG D P+   G A  VG K
Sbjct: 68  EKAL-FGR-KEWYFFTPRDRKYPNGSRP--NRAAGRGYWKATGADKPVAPKGSARTVGIK 123

Query: 136 RILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           + L+FY GKAPRG+KT W++HE+R+     +   R    +  + K++ ++ C++  K+
Sbjct: 124 KALVFYSGKAPRGVKTDWIMHEYRL-----ADADRAPGGKKGSQKLDEWVLCRLYNKK 176

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score =  120 bits (302), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 26/198 (13%)

Query: 41  LPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAY 100
           LP G+RF P   EL+ HYL KK +   LP  II E+DLY FDP +LP  +  +G+  E Y
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELP-EKATFGE-HEWY 92

Query: 101 FFT----------RPGKRRRTSSGYWKPTGRDLPILS-----GKAIVGFKRILIFYKGKA 145
           FF+          RP   R  +SGYWK TG D PIL+     G+  VG K+ L+FY+GK 
Sbjct: 93  FFSPRDRKYANGARP--NRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKP 150

Query: 146 PRGIKTPWVVHEFRVNPLYFSAIRRNKLD-------EDVNAKVESYIACKIRYKRQRQSD 198
           PRG+KT W++HE+R+      +   ++            + +++ ++ C+I  K  + + 
Sbjct: 151 PRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAA 210

Query: 199 KCGTSSKTQKANQSAAES 216
             G   ++ +   S  ++
Sbjct: 211 AVGDEQRSMECEDSVEDA 228

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score =  120 bits (302), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 105/198 (53%), Gaps = 26/198 (13%)

Query: 41  LPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAY 100
           LP G+RF P   EL+ HYL KK +   LP  II E+DLY FDP +LP  +  +G+  E Y
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAAKAPLPVTIIAEVDLYKFDPWELP-EKATFGE-HEWY 92

Query: 101 FFT----------RPGKRRRTSSGYWKPTGRDLPILS-----GKAIVGFKRILIFYKGKA 145
           FF+          RP   R  +SGYWK TG D PIL+     G+  VG K+ L+FY+GK 
Sbjct: 93  FFSPRDRKYPNGARP--NRAATSGYWKATGTDKPILASATGCGREKVGVKKALVFYRGKP 150

Query: 146 PRGIKTPWVVHEFRVNPLYFSAIRRNKLD-------EDVNAKVESYIACKIRYKRQRQSD 198
           PRG+KT W++HE+R+      +   ++            + +++ ++ C+I  K  + + 
Sbjct: 151 PRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKKTSKAAA 210

Query: 199 KCGTSSKTQKANQSAAES 216
             G   ++ +   S  ++
Sbjct: 211 AVGDEQRSMECEDSVEDA 228

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|Q8H4S4|NAC10_ORYSJ NAC transcription factor ONAC010 OS=Oryza sativa subsp. japonica GN=ONAC010 PE=2 SV=1

 Score =  119 bits (299), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 32/211 (15%)

Query: 30  RGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPIS 89
           R   Q      LP G+RF P   EL+ HYL KK +   LP  II E+DLY FDP  LP  
Sbjct: 18  RQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWDLP-E 76

Query: 90  EFKYGKPDEAYFFT----------RPGKRRRTSSGYWKPTGRDLPILSGKAI---VGFKR 136
           +  +G+  E YFF+          RP   R  +SGYWK TG D PI+S  +    VG K+
Sbjct: 77  KANFGE-QEWYFFSPRDRKYPNGARP--NRAATSGYWKATGTDKPIMSSGSTREKVGVKK 133

Query: 137 ILIFYKGKAPRGIKTPWVVHEFRVNPLYFSA-----IRR------NKLDEDVNAKVESYI 185
            L+FY+GK P+G+KT W++HE+R+     SA      RR            V+ +++ ++
Sbjct: 134 ALVFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRRPPPPITGGSKGAVSLRLDDWV 193

Query: 186 ACKIRYKRQRQSDKCGTSSKTQKANQSAAES 216
            C+I YK+   ++K G   ++ +   S  ++
Sbjct: 194 LCRI-YKK---TNKAGAGQRSMECEDSVEDA 220

Transcription factor of the NAC family associated with male fertility. Involved in anther development, but not in senescence. Reduced expression of NAC5 via RNAi leads to male-sterility.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score =  119 bits (299), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 110/211 (52%), Gaps = 32/211 (15%)

Query: 30  RGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPIS 89
           R   Q      LP G+RF P   EL+ HYL KK +   LP  II E+DLY FDP +LP  
Sbjct: 18  RQQQQPGSAPELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLYKFDPWELP-E 76

Query: 90  EFKYGKPDEAYFFT----------RPGKRRRTSSGYWKPTGRDLPILSGKAI---VGFKR 136
           +  +G+  E YFF+          RP   R  +SGYWK TG D PI++  +    VG K+
Sbjct: 77  KANFGE-QEWYFFSPRDRKYPNGARP--NRAATSGYWKATGTDKPIMASGSTREKVGVKK 133

Query: 137 ILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDED-----------VNAKVESYI 185
            L+FY+GK P+G+KT W++HE+R+     SA       +            V+ +++ ++
Sbjct: 134 ALVFYRGKPPKGVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPITGGSRGAVSLRLDDWV 193

Query: 186 ACKIRYKRQRQSDKCGTSSKTQKANQSAAES 216
            C+I YK+   ++K G   ++ +   S  ++
Sbjct: 194 LCRI-YKK---TNKAGAGQRSMECEDSVEDA 220

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  119 bits (298), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 31/186 (16%)

Query: 41  LPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAY 100
           LP G+RF P   EL+ HYL KK +   LP  II E+DLY FDP +LP  +  +G+  E Y
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAAKVPLPVTIITEVDLYKFDPWELP-EKATFGE-QEWY 85

Query: 101 FFT----------RPGKRRRTSSGYWKPTGRDLPILS---GKAIVGFKRILIFYKGKAPR 147
           FF+          RP   R  +SGYWK TG D PIL+   G+  VG K+ L+FY+GK P+
Sbjct: 86  FFSPRDRKYPNGARP--NRAATSGYWKATGTDKPILASGCGREKVGVKKALVFYRGKPPK 143

Query: 148 GIKTPWVVHEFRVNPLYFSAIRR-----NKLDEDVNAKVESYIACKIRYKR--------Q 194
           G+KT W++HE+R+     SA               + +++ ++ C+I YK+        Q
Sbjct: 144 GLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRI-YKKINKAAAGDQ 202

Query: 195 RQSDKC 200
           ++S +C
Sbjct: 203 QRSMEC 208

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|Q9FLJ2|NC100_ARATH NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1

 Score =  118 bits (296), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 60/137 (43%), Positives = 84/137 (61%), Gaps = 8/137 (5%)

Query: 31  GSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISE 90
           G  +++EQ +LP G+RF P   ELITHYL KK+      A  I E+DL   +P +LP   
Sbjct: 6   GFQKEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMA 65

Query: 91  FKYGKPDEAYFFTRPGK-------RRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKG 143
            K G+ +  +F  R  K        R T +GYWK TG+D  I  GK++VG K+ L+FY+G
Sbjct: 66  -KMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRG 124

Query: 144 KAPRGIKTPWVVHEFRV 160
           +AP+G KT WV+HE+R+
Sbjct: 125 RAPKGQKTNWVMHEYRL 141

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score =  118 bits (295), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 97/166 (58%), Gaps = 19/166 (11%)

Query: 38  QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
           + NLP G+RF P   EL+  YL +K + +Q+ A +I EIDLY F+P +LP     YG+  
Sbjct: 4   ELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSL-YGE-K 61

Query: 98  EAYFF----------TRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPR 147
           E YFF          +RP   R   +GYWK TG D PI   K + G K+ L+FY GKAP+
Sbjct: 62  EWYFFSPRDRKYPNGSRP--NRAAGTGYWKATGADKPIGKPKTL-GIKKALVFYAGKAPK 118

Query: 148 GIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           GIKT W++HE+R+     +  R   +++  N +++ ++ C+I  K+
Sbjct: 119 GIKTNWIMHEYRLA----NVDRSASVNKKNNLRLDDWVLCRIYNKK 160

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
255542074	279	transcription factor, putative [Ricinus	0.653	0.519	0.454	8e-31
224081060	307	NAC domain protein, IPR003441 [Populus t	0.657	0.475	0.437	4e-28
57233056	307	NAC domain protein 1 [Capsicum annuum]	0.671	0.485	0.415	4e-28
116782512	324	unknown [Picea sitchensis]	0.833	0.570	0.398	5e-28
116784797	324	unknown [Picea sitchensis]	0.833	0.570	0.398	5e-28
356541898	349	PREDICTED: NAC domain-containing protein	0.774	0.492	0.383	6e-28
414879990	1467	TPA: putative NAC domain and pentatricop	0.819	0.124	0.361	6e-28
350536035	301	NAC domain protein [Solanum lycopersicum	0.684	0.504	0.419	8e-28
187940307	298	NAC domain protein, partial [Glycine max	0.770	0.573	0.393	8e-28
356512866	298	PREDICTED: NAC domain-containing protein	0.770	0.573	0.393	1e-27

>gi|255542074|ref|XP_002512101.1| transcription factor, putative [Ricinus communis] gi|223549281|gb|EEF50770.1| transcription factor, putative [Ricinus communis]

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 70/154 (45%), Positives = 94/154 (61%), Gaps = 9/154 (5%)

Query: 27  SAGRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQL 86
           SAGR  +      N   GYRFSP   ELI +YL +KI G   P +II+E+D+Y  DP QL
Sbjct: 104 SAGRCVDMVG-NLNSVCGYRFSPNDYELIIYYLAQKILGMPRPLDIIQEVDVYKCDPEQL 162

Query: 87  PISEFKYGKPDEAYFFTR--------PGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRIL 138
           PI EFK+  P EAYFFTR           RR   +GYWK T ++  +   K  VG+K+ +
Sbjct: 163 PIDEFKHALPGEAYFFTRKVRKHSNKSSSRRTIGTGYWKATDKETIVTRRKKCVGYKKTM 222

Query: 139 IFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNK 172
           +FY+GKAP+G +T W++ E+RVN   F  I+RN+
Sbjct: 223 VFYRGKAPKGKRTHWIMDEYRVNASLFPNIQRNE 256

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224081060|ref|XP_002306280.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222855729|gb|EEE93276.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/167 (43%), Positives = 99/167 (59%), Gaps = 21/167 (12%)

Query: 37  EQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKP 96
           +Q  LP G+RF P  +EL+ HYLIKK  GQ +   II EIDLY +DP QLP     YG+ 
Sbjct: 10  DQLELPAGFRFHPTDDELVNHYLIKKCGGQSISVPIIAEIDLYKYDPWQLPEMAL-YGE- 67

Query: 97  DEAYFF----------TRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAP 146
            E YFF          +RP   R   +GYWK TG D PI   K + G K+ L+FY GKAP
Sbjct: 68  KEWYFFSPRDRKYPNGSRP--NRAAGTGYWKATGADKPIGRPKPL-GIKKALVFYAGKAP 124

Query: 147 RGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           RGIKT W++HE+R+  +  SA ++N      N +++ ++ C+I  K+
Sbjct: 125 RGIKTNWIMHEYRLANVDRSAGKKN------NLRLDDWVLCRIYNKK 165

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|57233056|gb|AAW48094.1| NAC domain protein 1 [Capsicum annuum]

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 100/166 (60%), Gaps = 17/166 (10%)

Query: 36  DEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGK 95
           ++Q  LP G+RF P   EL+ HYL +K +GQ +  +II EIDLY FDP QLP     YG+
Sbjct: 8   NQQLGLPAGFRFHPTDEELVQHYLCRKCAGQSISVSIIAEIDLYKFDPWQLPEKAL-YGE 66

Query: 96  PDEAYFFTRPGKR--------RRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPR 147
             E YFF++  ++        R   +GYWK TG D P+   K + G K+ L+FY GKAPR
Sbjct: 67  -KEWYFFSQEDRKYPNGSRPNRAAGTGYWKATGADKPVGKPKTL-GIKKALVFYAGKAPR 124

Query: 148 GIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           GIKT W++HE+R+  +  SA + N      N +++ ++ C+I  K+
Sbjct: 125 GIKTNWIMHEYRLANVDRSAGKSN------NLRLDDWVLCRIYNKK 164

Source: Capsicum annuum

Species: Capsicum annuum

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116782512|gb|ABK22535.1| unknown [Picea sitchensis]

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 110/206 (53%), Gaps = 21/206 (10%)

Query: 29  GRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPI 88
           G  S  +  Q NLP G+RF P   EL+ HYL K+++ Q  P  II EIDLY FDP QLP 
Sbjct: 8   GCKSGPNSAQINLPPGFRFYPTDEELMVHYLCKRVASQPFPIPIIAEIDLYKFDPWQLPE 67

Query: 89  SEFKYGKPDEAYFF----------TRPGKRRRTSSGYWKPTGRDLPILSG--KAIVGFKR 136
               +G+  E YFF          +RP   R   SGYWK TG D P+ +G  +  VG K+
Sbjct: 68  KAL-FGE-KEWYFFSPRDRKYPNGSRPN--RAAGSGYWKATGTDKPVTAGLNRMKVGVKK 123

Query: 137 ILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRN---KLDEDVNAKV--ESYIACKIRY 191
            L+FYKGKAPRGIKT W++HE+R+      A +R    +LD+ V  ++  + Y + K   
Sbjct: 124 ALVFYKGKAPRGIKTNWIMHEYRLADSASKAAKRKGSIRLDDWVLCRIYEKHYASQKAVP 183

Query: 192 KRQRQSDKCGTSSKTQKANQSAAESP 217
           K   +   C    + Q     A+ SP
Sbjct: 184 KESNELSSCVDPEEDQYMAPVASNSP 209

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116784797|gb|ABK23477.1| unknown [Picea sitchensis]

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 82/206 (39%), Positives = 110/206 (53%), Gaps = 21/206 (10%)

Query: 29  GRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPI 88
           G  S  +  Q NLP G+RF P   EL+ HYL K+++ Q  P  II EIDLY FDP QLP 
Sbjct: 8   GCKSGPNSAQINLPPGFRFYPTDEELMVHYLCKRVASQPFPIPIIAEIDLYKFDPWQLPE 67

Query: 89  SEFKYGKPDEAYFF----------TRPGKRRRTSSGYWKPTGRDLPILSG--KAIVGFKR 136
               +G+  E YFF          +RP   R   SGYWK TG D P+ +G  +  VG K+
Sbjct: 68  KAL-FGE-KEWYFFSPRDRKYPNGSRPN--RAAGSGYWKATGTDKPVTAGLNRMKVGVKK 123

Query: 137 ILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRN---KLDEDVNAKV--ESYIACKIRY 191
            L+FYKGKAPRGIKT W++HE+R+      A +R    +LD+ V  ++  + Y + K   
Sbjct: 124 ALVFYKGKAPRGIKTNWIMHEYRLADSASKAAKRKGSIRLDDWVLCRIYEKHYASQKAVP 183

Query: 192 KRQRQSDKCGTSSKTQKANQSAAESP 217
           K   +   C    + Q     A+ SP
Sbjct: 184 KESNELSSCVDPEEDQYMAPVASNSP 209

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541898|ref|XP_003539409.1| PREDICTED: NAC domain-containing protein 68-like [Glycine max]

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 110/193 (56%), Gaps = 21/193 (10%)

Query: 33  NQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFK 92
           +Q    Y+ P G+RF P   ELI HYL  K+S + LPA II EIDLY ++P +LP     
Sbjct: 4   DQHGSNYSFPPGFRFHPSDEELIVHYLENKVSSRPLPACIIAEIDLYKYNPWELPNKSL- 62

Query: 93  YGKPDEAYFFT----------RPGKRRRTSSGYWKPTGRDLPILS--GKAIVGFKRILIF 140
           +G+ +E YFF+          RP   R  +SGYWK TG D PILS  G   +G K+ L+F
Sbjct: 63  FGE-EEWYFFSPRDRKYPNGLRPN--RAAASGYWKATGTDKPILSSCGSRRIGVKKALVF 119

Query: 141 YKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKC 200
           Y G+ P+G KT W+++E+R   L  + I+ ++L   +  +++ ++ C++RYK   Q + C
Sbjct: 120 YSGRPPKGAKTDWIMNEYR---LVDTTIKSSRLKGSM--RLDDWVLCRVRYKGYSQKNSC 174

Query: 201 GTSSKTQKANQSA 213
                  + N SA
Sbjct: 175 ENQESPSELNLSA 187

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing protein [Zea mays]

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 28/210 (13%)

Query: 26  ISAGRGSNQDDEQ--YNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDP 83
           ++A  GS + D +   NLP G+RF P   EL+ +YL +K++ QQ+P  II E+DLY FDP
Sbjct: 4   VAAAEGSGRRDAEAELNLPPGFRFHPTDEELVVYYLCRKVARQQVPVPIIAEVDLYKFDP 63

Query: 84  HQLPISEFKYGKPDEAYFFTRPGKR--------RRTSSGYWKPTGRD---LPILSGKAIV 132
             LP     +G+  E YFFT   ++        R    GYWK TG D   +P+ S +A  
Sbjct: 64  WDLPEKAL-FGR-KEWYFFTPRDRKYPNGSRPNRTAGKGYWKATGADKSIVPMGSTRA-A 120

Query: 133 GFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYK 192
           G K+ L+FY GKAPRG+KT W++HE+RV      A   + L +  + K++ ++ C++  K
Sbjct: 121 GIKKALVFYSGKAPRGVKTDWIMHEYRV------AQADHTLGKKGSQKLDEWVLCRLYNK 174

Query: 193 RQR------QSDKCGTSSKTQKANQSAAES 216
           R        +  +   + + Q   QSA +S
Sbjct: 175 RNNWDKVKVEEQELEAAPRRQHHLQSAEDS 204

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350536035|ref|NP_001234482.1| NAC domain protein [Solanum lycopersicum] gi|40647397|gb|AAR88435.1| NAC domain protein [Solanum lycopersicum] gi|195549549|gb|ACG50002.1| NAC domain protein 1 [Solanum lycopersicum]

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/174 (41%), Positives = 104/174 (59%), Gaps = 22/174 (12%)

Query: 30  RGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPIS 89
           +G+N  ++Q  LP G+RF P  +EL+ HYL +K +GQ +  +II EIDLY FDP QLP  
Sbjct: 3   KGAN-GNQQLELPAGFRFHPTDDELVQHYLCRKCAGQSIAVSIIAEIDLYKFDPWQLPEK 61

Query: 90  EFKYGKPDEAYFF----------TRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILI 139
              YG+  E YFF          +RP   R   +GYWK TG D P+   K + G K+ L+
Sbjct: 62  AL-YGE-KEWYFFSPRDRKYPNGSRPN--RAAGTGYWKATGADKPVGKPKTL-GIKKALV 116

Query: 140 FYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           FY GKAPRGIKT W++HE+R+  +  SA + N      N +++ ++ C+I  K+
Sbjct: 117 FYAGKAPRGIKTNWIMHEYRLANVDRSAGKNN------NLRLDDWVLCRIYNKK 164

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|187940307|gb|ACD39384.1| NAC domain protein, partial [Glycine max]

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 108/188 (57%), Gaps = 17/188 (9%)

Query: 38  QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
           +  LP G+RF P  +EL+ HYL +K + Q +   II+EIDLY FDP QLP     YG+  
Sbjct: 4   ELQLPPGFRFHPTDDELVNHYLCRKCAAQTIAVPIIKEIDLYKFDPWQLPEMAL-YGE-K 61

Query: 98  EAYFF----------TRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPR 147
           E YFF          +RP   R   SGYWK TG D PI + KA+ G K+ L+FY GKAP+
Sbjct: 62  EWYFFSPRDRKYPNGSRPN--RAAGSGYWKATGADKPIGNPKAL-GIKKALVFYAGKAPK 118

Query: 148 GIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKCGTSSKTQ 207
           G+KT W++HE+R+  +  SA ++N      N +++ ++ C+I  K+ +     G +   Q
Sbjct: 119 GVKTNWIMHEYRLANVDRSASKKNTTTN--NLRLDDWVLCRIYNKKGKIEKYNGVAVVDQ 176

Query: 208 KANQSAAE 215
           K  + + E
Sbjct: 177 KVAKLSEE 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512866|ref|XP_003525136.1| PREDICTED: NAC domain-containing protein 2 [Glycine max]

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 107/188 (56%), Gaps = 17/188 (9%)

Query: 38  QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
           +  LP G+RF P  +EL+ HYL +K + Q +   II+EIDLY FDP QLP     YG+  
Sbjct: 4   ELQLPPGFRFHPTDDELVNHYLCRKCAAQTIAVPIIKEIDLYKFDPWQLPEMAL-YGE-K 61

Query: 98  EAYFF----------TRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPR 147
           E YFF          +RP   R   SGYWK TG D PI   KA+ G K+ L+FY GKAP+
Sbjct: 62  EWYFFSPRDRKYPNGSRPN--RAAGSGYWKATGADKPIGKPKAL-GIKKALVFYAGKAPK 118

Query: 148 GIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKCGTSSKTQ 207
           G+KT W++HE+R+  +  SA ++N      N +++ ++ C+I  K+ +     G +   Q
Sbjct: 119 GVKTNWIMHEYRLANVDRSASKKNTTTN--NLRLDDWVLCRIYNKKGKIEKYNGVAVVDQ 176

Query: 208 KANQSAAE 215
           K  + + E
Sbjct: 177 KVAKLSEE 184

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	222
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.770	0.604	0.374	3.5e-27
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.684	0.567	0.404	4.5e-27
TAIR|locus:2160324	329	NAC080 "NAC domain containing	0.680	0.458	0.403	4.5e-27
TAIR|locus:2164895	285	NAC6 "NAC domain containing pr	0.684	0.533	0.407	1.2e-26
TAIR|locus:2163153	336	NAC100 "NAC domain containing	0.743	0.491	0.392	1.5e-26
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.545	0.332	0.466	2.5e-26
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.689	0.478	0.388	3.2e-26
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.680	0.467	0.421	3.2e-26
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.774	0.595	0.380	5.2e-26
TAIR|locus:2087037	318	NAC3 "NAC domain containing pr	0.581	0.405	0.437	5.2e-26

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 70/187 (37%), Positives = 108/187 (57%)

Query:    38 QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
             + NLP G+RF P   EL+  YL +K + +Q+ A +I EIDLY F+P +LP     YG+  
Sbjct:     4 ELNLPAGFRFHPTDEELVKFYLCRKCASEQISAPVIAEIDLYKFNPWELPEMSL-YGEK- 61

Query:    98 EAYFFTR-----P-GKR--RRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGI 149
             E YFF+      P G R  R   +GYWK TG D PI   K + G K+ L+FY GKAP+GI
Sbjct:    62 EWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTL-GIKKALVFYAGKAPKGI 120

Query:   150 KTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKCGTSSKTQKA 209
             KT W++HE+R+  +  SA     +++  N +++ ++ C+I Y ++   +K   + +  + 
Sbjct:   121 KTNWIMHEYRLANVDRSA----SVNKKNNLRLDDWVLCRI-YNKKGTMEKYFPADEKPRT 175

Query:   210 NQSAAES 216
                A +S
Sbjct:   176 TTMAEQS 182

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 68/168 (40%), Positives = 103/168 (61%)

Query:    38 QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
             Q  LP G+RF P   ELI +YL  +   +  P +II E+D+Y FDP QLP  + ++G+ +
Sbjct:     6 QSTLPPGFRFHPTDEELIVYYLRNQTMSKPCPVSIIPEVDIYKFDPWQLP-EKTEFGE-N 63

Query:    98 EAYFFTR-----P-GKR--RRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGI 149
             E YFF+      P G R  R   SGYWK TG D  I SG + VG K+ L+FYKG+ P+GI
Sbjct:    64 EWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGI 123

Query:   150 KTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQS 197
             KT W++HE+R++    ++ +RN      + +++ ++ C+I YK++  S
Sbjct:   124 KTDWIMHEYRLHDSRKASTKRNG-----SMRLDEWVLCRI-YKKRGAS 165

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2160324 NAC080 "NAC domain containing protein 80" [Arabidopsis thaliana (taxid:3702)]

 Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
 Identities = 67/166 (40%), Positives = 98/166 (59%)

Query:    34 QDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKY 93
             +DDEQ +LP G+RF P   ELITHYL KK+      A  I E+DL   +P +LP    K 
Sbjct:    10 EDDEQMDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKA-KI 68

Query:    94 GKPDEAYFFTRPGK-------RRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAP 146
             G+ +  +F  R  K        R T +GYWK TG+D  I  GK++VG K+ L+FY+G+AP
Sbjct:    69 GEKEWYFFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGKSLVGMKKTLVFYRGRAP 128

Query:   147 RGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYK 192
             +G KT WV+HE+R++      +  + L +   AK E ++ C++ +K
Sbjct:   129 KGQKTNWVMHEYRLD----GKLSAHNLPK--TAKNE-WVICRVFHK 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2164895 NAC6 "NAC domain containing protein 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 68/167 (40%), Positives = 95/167 (56%)

Query:    34 QDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKY 93
             +D+E  +LP G+RF P   ELITHYL  K+      A  I E+DL   +P  LP    K 
Sbjct:    13 EDEEHIDLPPGFRFHPTDEELITHYLKPKVFNTFFSATAIGEVDLNKIEPWDLPWKA-KM 71

Query:    94 GKPDEAYFFTRPGK-------RRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAP 146
             G+ +  +F  R  K        R T +GYWK TG+D  I  GK++VG K+ L+FYKG+AP
Sbjct:    72 GEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAP 131

Query:   147 RGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
             +G+KT WV+HE+R+   Y   I    L +   AK E ++ C++  KR
Sbjct:   132 KGVKTNWVMHEYRLEGKY--CIEN--LPQ--TAKNE-WVICRVFQKR 171

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IPI

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0042803 "protein homodimerization activity" evidence=IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010150 "leaf senescence" evidence=IEP;IMP

GO:0009651 "response to salt stress" evidence=IEP;RCA

GO:0010468 "regulation of gene expression" evidence=IMP

GO:0000303 "response to superoxide" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009743 "response to carbohydrate stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009873 "ethylene mediated signaling pathway" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2163153 NAC100 "NAC domain containing protein 100" [Arabidopsis thaliana (taxid:3702)]

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 71/181 (39%), Positives = 102/181 (56%)

Query:    31 GSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISE 90
             G  +++EQ +LP G+RF P   ELITHYL KK+      A  I E+DL   +P +LP   
Sbjct:     6 GFQKEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMA 65

Query:    91 FKYGKPDEAYFFTRPGK-------RRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKG 143
              K G+ +  +F  R  K        R T +GYWK TG+D  I  GK++VG K+ L+FY+G
Sbjct:    66 -KMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGKSLVGMKKTLVFYRG 124

Query:   144 KAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKCGTS 203
             +AP+G KT WV+HE+R+    FSA    K      AK E ++ C++ +++     K   S
Sbjct:   125 RAPKGQKTNWVMHEYRLEGK-FSAHNLPK-----TAKNE-WVICRV-FQKSAGGKKIPIS 176

Query:   204 S 204
             S
Sbjct:   177 S 177

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 62/133 (46%), Positives = 85/133 (63%)

Query:    38 QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
             Q NLP G+RF P   EL+ HYL +K +   LP  II E+DLY FDP +LP ++  +G+  
Sbjct:    14 QPNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLYKFDPWELP-AKASFGE-Q 71

Query:    98 EAYFFTR-----P-GKR--RRTSSGYWKPTGRDLPILS--GKAIVGFKRILIFYKGKAPR 147
             E YFF+      P G R  R  +SGYWK TG D P+L+  G   VG K+ L+FY GK P+
Sbjct:    72 EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGKPPK 131

Query:   148 GIKTPWVVHEFRV 160
             G+K+ W++HE+R+
Sbjct:   132 GVKSDWIMHEYRL 144

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 68/175 (38%), Positives = 102/175 (58%)

Query:    38 QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
             Q NLP G+RF P   EL+ HYL +K     LP  II ++DLY FDP +LP ++  +G+  
Sbjct:    14 QPNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELP-AKASFGE-Q 71

Query:    98 EAYFFTR-----P-GKR--RRTSSGYWKPTGRDLPILS----GKAIVGFKRILIFYKGKA 145
             E YFF+      P G R  R  +SGYWK TG D P++S    G   VG K+ L+FY GK 
Sbjct:    72 EWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKP 131

Query:   146 PRGIKTPWVVHEFRVN---PLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQS 197
             P+G+K+ W++HE+R+    P +      NK +   + +++ ++ C+I YK+   +
Sbjct:   132 PKGVKSDWIMHEYRLTDNKPTHICDFG-NKKN---SLRLDDWVLCRI-YKKNNST 181

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 70/166 (42%), Positives = 99/166 (59%)

Query:    40 NLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEA 99
             +LP G+RF P   EL+ HYL KK     LP +II EIDLY FDP +LP S+  +G+  E 
Sbjct:    15 HLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELP-SKASFGE-HEW 72

Query:   100 YFFTR-----P-GKR--RRTSSGYWKPTGRDLPILSGKAI-VGFKRILIFYKGKAPRGIK 150
             YFF+      P G R  R  +SGYWK TG D PI +  +  VG K+ L+FY GK P+GIK
Sbjct:    73 YFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIK 132

Query:   151 TPWVVHEFRVNPLYFSAIRR--NKLDEDVNA-KVESYIACKIRYKR 193
             T W++HE+R+     S   +  +      N+ +++ ++ C+I YK+
Sbjct:   133 TDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRI-YKK 177

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 72/189 (38%), Positives = 105/189 (55%)

Query:    37 EQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKP 96
             E   LP G+RF P   EL+ HYL +K + Q +   II EIDLY +DP +LP     YG+ 
Sbjct:     3 ELLQLPPGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLAL-YGEK 61

Query:    97 DEAYFFTR-----P-GKR--RRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRG 148
              E YFF+      P G R  R   SGYWK TG D PI   K  VG K+ L+FY GKAP+G
Sbjct:    62 -EWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKP-VGIKKALVFYAGKAPKG 119

Query:   149 IKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDKCGTSSKTQK 208
              KT W++HE+R+  +  S +R+ K     + +++ ++ C+I Y ++  +++ G       
Sbjct:   120 EKTNWIMHEYRLADVDRS-VRKKKN----SLRLDDWVLCRI-YNKKGATERRGPPPPVVY 173

Query:   209 ANQSAAESP 217
              ++   E P
Sbjct:   174 GDEIMEEKP 182

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2087037 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
 Identities = 60/137 (43%), Positives = 82/137 (59%)

Query:    31 GSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISE 90
             G  +D E+ +LP G+RF P   ELITHYL  K+      A  I E+DL   +P  LP   
Sbjct:    14 GEVEDSEKIDLPPGFRFHPTDEELITHYLRPKVVNSFFSAIAIGEVDLNKVEPWDLPWKA 73

Query:    91 FKYGKPDEAYFFTRPGK-------RRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKG 143
              K G+ +  +F  R  K        R T +GYWK TG+D  I  GK++VG K+ L+FYKG
Sbjct:    74 -KLGEKEWYFFCVRDRKYPTGLRTNRATKAGYWKATGKDKEIFKGKSLVGMKKTLVFYKG 132

Query:   144 KAPRGIKTPWVVHEFRV 160
             +AP+G+KT WV+HE+R+
Sbjct:   133 RAPKGVKTNWVMHEYRL 149

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IPI

GO:0046982 "protein heterodimerization activity" evidence=IPI

GO:0010150 "leaf senescence" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: NAC043 NAC domain protein, IPR003441 (307 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	222
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	4e-46

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  148 bits (377), Expect = 4e-46
 Identities = 60/129 (46%), Positives = 83/129 (64%), Gaps = 11/129 (8%)

Query: 41  LPLGYRFSPRGNELITHYLIKKISGQQLPA-NIIREIDLYAFDPHQLPISEFKYGKPDEA 99
           LP G+RF P   EL+ +YL +K+ G+ LP  ++I E+D+Y F+P  LP  + K G   E 
Sbjct: 1   LPPGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAK-GGDREW 59

Query: 100 YFFTRPGK--------RRRTSSGYWKPTGRDLPILS-GKAIVGFKRILIFYKGKAPRGIK 150
           YFF+   +         R T SGYWK TG+D P+LS G  +VG K+ L+FYKG+AP+G K
Sbjct: 60  YFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEK 119

Query: 151 TPWVVHEFR 159
           T WV+HE+R
Sbjct: 120 TDWVMHEYR 128

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	222
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=5e-42  Score=271.85  Aligned_cols=119  Identities=48%  Similarity=0.990  Sum_probs=95.5

Q ss_pred             CCCceeECCChHHHHHHHHHHhhcCCCCCC-CeeEeccCCCCCCCCCCccccccCCCCeEEEeecCCcc--------ccC
Q 046940           41 LPLGYRFSPRGNELITHYLIKKISGQQLPA-NIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKR--------RRT  111 (222)
Q Consensus        41 LPpGfRF~PTDeELV~~YL~~Ki~g~pl~~-~~I~~~Dvy~~~PweLp~~~~~~g~~~~wYFFt~~~~k--------R~~  111 (222)
                      |||||||+|||+|||.+||++|+.|.+++. ++|+++|||++|||+|+. .... ++++||||++++++        |++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~-~~~~-~~~~~yFF~~~~~~~~~~~r~~R~~   78 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPA-KFKG-GDEEWYFFSPRKKKYPNGGRPNRVT   78 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHH-HSSS--SSEEEEEEE----------S-EEE
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhh-hccC-CCceEEEEEecccccCCcccccccc
Confidence            899999999999999999999999999887 799999999999999995 3322 37899999999864        788


Q ss_pred             CCceeecCCCCeeeec-CCeeEEEEEEeeeecCCCCCCCCcCeEEEEEEeC
Q 046940          112 SSGYWKPTGRDLPILS-GKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVN  161 (222)
Q Consensus       112 ~~G~Wk~~g~~k~I~~-~g~~vG~kr~l~F~~~~~~~~~kT~W~M~EY~l~  161 (222)
                      ++|+||.+|+.+.|.+ +|.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        79 ~~G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   79 GGGYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TTEEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             cceEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999998 9999999999999988888889999999999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	222
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		7e-28
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-24
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-24

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  120 bits (300), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 61/135 (45%), Positives = 81/135 (60%), Gaps = 14/135 (10%)
Query: 36  DEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGK 95
           + + NLP G+RF P  +EL+ HYL +K +GQ+LP  II E+DLY FDP  LP       +
Sbjct: 10  EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAR 69
Query: 96  PDEAYFFT----------RPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKA 145
             E YFFT          RP   R   +GYWK TG D P+      +G K+ L+FY GKA
Sbjct: 70  --EWYFFTPRDRKYPNGSRPN--RAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKA 125
Query: 146 PRGIKTPWVVHEFRV 160
           PRG+KT W++HE+R+
Sbjct: 126 PRGVKTDWIMHEYRL 140

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  108 bits (271), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 24/172 (13%)
Query: 38  QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
           Q +LP G+RF P   EL+  YL +K +G      +I EIDLY FDP  LP ++  +G+  
Sbjct: 14  QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP-NKALFGE-K 71
Query: 98  EAYFFT----------RPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPR 147
           E YFF+          RP   R   SGYWK TG D  I +    VG K+ L+FY GKAP+
Sbjct: 72  EWYFFSPRDRKYPNGSRP--NRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPK 129
Query: 148 GIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDK 199
           G KT W++HE+R+        RRN      + K++ ++ C+I YK+Q  + K
Sbjct: 130 GTKTNWIMHEYRL----IEPSRRNG-----STKLDDWVLCRI-YKKQSSAQK 171

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 24/172 (13%)
Query: 38  QYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPD 97
           Q +LP G+RF P   EL+  YL +K +G      +I EIDLY FDP  LP ++  +G+  
Sbjct: 17  QLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP-NKALFGE-K 74
Query: 98  EAYFFT----------RPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPR 147
           E YFF+          RP   R   SGYWK TG D  I +    VG K+ L+FY GKAP+
Sbjct: 75  EWYFFSPRDRKYPNGSRPN--RVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPK 132
Query: 148 GIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKRQRQSDK 199
           G KT W++HE+R+        RRN      + K++ ++ C+I YK+Q  + K
Sbjct: 133 GTKTNWIMHEYRL----IEPSRRNG-----STKLDDWVLCRI-YKKQSSAQK 174

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	222
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	5e-54
1ut7_A	171	No apical meristem protein; transcription regulati	9e-53

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  169 bits (431), Expect = 5e-54
 Identities = 65/174 (37%), Positives = 96/174 (55%), Gaps = 14/174 (8%)

Query: 28  AGRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLP 87
             R     + + NLP G+RF P  +EL+ HYL +K +GQ+LP  II E+DLY FDP  LP
Sbjct: 2   GMRRERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLP 61

Query: 88  ISEFKYGKPDEAYFFTRPGKR--------RRTSSGYWKPTGRDLPILSGKAIVGFKRILI 139
             E       E YFFT   ++        R   +GYWK TG D P+      +G K+ L+
Sbjct: 62  --ERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKKALV 119

Query: 140 FYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           FY GKAPRG+KT W++HE+R+     +A    K     + +++ ++ C++  K+
Sbjct: 120 FYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKK----GSLRLDDWVLCRLYNKK 169

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  166 bits (423), Expect = 9e-53
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 19/173 (10%)

Query: 29  GRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPI 88
           G        Q +LP G+RF P   EL+  YL +K +G      +I EIDLY FDP  LP 
Sbjct: 5   GIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLP- 63

Query: 89  SEFKYGKPDEAYFFTRPGKR--------RRTSSGYWKPTGRDLPILSGKAIVGFKRILIF 140
                    E YFF+   ++        R   SGYWK TG D  I +    VG K+ L+F
Sbjct: 64  -NKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVF 122

Query: 141 YKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           Y GKAP+G KT W++HE+R+               + + K++ ++ C+I  K+
Sbjct: 123 YIGKAPKGTKTNWIMHEYRLI---------EPSRRNGSTKLDDWVLCRIYKKQ 166

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	222
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=1.8e-53  Score=353.08  Aligned_cols=153  Identities=41%  Similarity=0.860  Sum_probs=131.1

Q ss_pred             cCccCCCCceeECCChHHHHHHHHHHhhcCCCCCCCeeEeccCCCCCCCCCCccccccCCCCeEEEeecCCcc-------
Q 046940           36 DEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKR-------  108 (222)
Q Consensus        36 ~~~~~LPpGfRF~PTDeELV~~YL~~Ki~g~pl~~~~I~~~Dvy~~~PweLp~~~~~~g~~~~wYFFt~~~~k-------  108 (222)
                      +.++.|||||||+|||||||.|||++|+.|.+++.++|+++|||.+|||+||+ .+..+ +.+||||+++.+|       
T Consensus        10 ~~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~-~~~~g-~~ewYFFs~r~~ky~~g~R~   87 (174)
T 3ulx_A           10 EAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPE-RALFG-AREWYFFTPRDRKYPNGSRP   87 (174)
T ss_dssp             CSTTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGG-GCSSC-SSEEEEEEECCC-----CCS
T ss_pred             ccccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhh-hhccC-CceEEEEeccccccCCCCCc
Confidence            45789999999999999999999999999999999999999999999999999 66666 7899999999764       


Q ss_pred             -ccCCCceeecCCCCeeeecCCeeEEEEEEeeeecCCCCCCCCcCeEEEEEEeCCCCchhhhcccccccccccCCcEEEE
Q 046940          109 -RRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIAC  187 (222)
Q Consensus       109 -R~~~~G~Wk~~g~~k~I~~~g~~vG~kr~l~F~~~~~~~~~kT~W~M~EY~l~~~~~~~~~~~~~~~~~~~~~~~~VLC  187 (222)
                       |++++|+||++|+++.|..+|.+||+|++|+||.++.+++.+|+|+||||+|.+....+...    .......++||||
T Consensus        88 nR~t~~G~WkatG~dk~I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~----~~~~~~~~~wVlC  163 (174)
T 3ulx_A           88 NRAAGNGYWKATGADKPVAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGA----KKGSLRLDDWVLC  163 (174)
T ss_dssp             CEEETTEEEEECSCCEEECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC---------------CCSSEEEE
T ss_pred             eeecCCceEccCCCCcEEeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCccccc----ccCCCCCCCEEEE
Confidence             78999999999999999988899999999999999999999999999999999875432100    1112346899999


Q ss_pred             EEEeecC
Q 046940          188 KIRYKRQ  194 (222)
Q Consensus       188 rI~~k~~  194 (222)
                      |||+|+.
T Consensus       164 rvf~K~~  170 (174)
T 3ulx_A          164 RLYNKKN  170 (174)
T ss_dssp             EEEESCC
T ss_pred             EEEEcCC
Confidence            9998753

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=7.8e-53  Score=348.58  Aligned_cols=148  Identities=41%  Similarity=0.774  Sum_probs=129.7

Q ss_pred             cCccCCCCceeECCChHHHHHHHHHHhhcCCCCCCCeeEeccCCCCCCCCCCccccccCCCCeEEEeecCCcc-------
Q 046940           36 DEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKR-------  108 (222)
Q Consensus        36 ~~~~~LPpGfRF~PTDeELV~~YL~~Ki~g~pl~~~~I~~~Dvy~~~PweLp~~~~~~g~~~~wYFFt~~~~k-------  108 (222)
                      ..++.|||||||+|||||||.|||++|+.|.+++.++|+++|||.+|||+||+ .+..+ +.+||||+++.+|       
T Consensus        12 ~~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~-~~~~g-~~ewyFFs~r~~k~~~g~R~   89 (171)
T 1ut7_A           12 LTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPN-KALFG-EKEWYFFSPRDRKYPNGSRP   89 (171)
T ss_dssp             CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHH-HSSSC-SSEEEEEEECCC-------C
T ss_pred             ccccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhc-hhhcC-CccEEEEeccccccCCCCcc
Confidence            45789999999999999999999999999999999999999999999999999 66666 8999999999865       


Q ss_pred             -ccCCCceeecCCCCeeeecCCeeEEEEEEeeeecCCCCCCCCcCeEEEEEEeCCCCchhhhcccccccccccCCcEEEE
Q 046940          109 -RRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIAC  187 (222)
Q Consensus       109 -R~~~~G~Wk~~g~~k~I~~~g~~vG~kr~l~F~~~~~~~~~kT~W~M~EY~l~~~~~~~~~~~~~~~~~~~~~~~~VLC  187 (222)
                       |++++|+||++|+++.|..++.+||+|++|+||.++.+++.+|+|+||||+|......         ......++||||
T Consensus        90 ~R~t~~G~Wk~tG~~k~I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~---------~~~~~~~~~VlC  160 (171)
T 1ut7_A           90 NRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR---------NGSTKLDDWVLC  160 (171)
T ss_dssp             CEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------------CCEEEE
T ss_pred             cccCCCCEEeccCCCceEEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccc---------cCcccCCCEEEE
Confidence             7899999999999999999889999999999999999999999999999999987521         011345889999


Q ss_pred             EEEeecC
Q 046940          188 KIRYKRQ  194 (222)
Q Consensus       188 rI~~k~~  194 (222)
                      |||+|+.
T Consensus       161 rv~~k~~  167 (171)
T 1ut7_A          161 RIYKKQS  167 (171)
T ss_dssp             EEEECC-
T ss_pred             EEEEcCC
Confidence            9998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	222
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	5e-44

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  143 bits (361), Expect = 5e-44
 Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 15/171 (8%)

Query: 29  GRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLP- 87
           G        Q +LP G+RF P   EL+  YL +K +G      +I EIDLY FDP  LP 
Sbjct: 5   GIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPN 64

Query: 88  -----ISEFKYGKPDEAYFFTRPGKRRRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYK 142
                  E+ +  P +  +       R   SGYWK TG D  I +    VG K+ L+FY 
Sbjct: 65  KALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYI 124

Query: 143 GKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAKVESYIACKIRYKR 193
           GKAP+G KT W++HE+R+               + + K++ ++ C+I  K+
Sbjct: 125 GKAPKGTKTNWIMHEYRLI---------EPSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	222
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-52  Score=343.81  Aligned_cols=154  Identities=40%  Similarity=0.747  Sum_probs=130.5

Q ss_pred             CCCCCCCcCccCCCCceeECCChHHHHHHHHHHhhcCCCCCCCeeEeccCCCCCCCCCCccccccCCCCeEEEeecCCcc
Q 046940           29 GRGSNQDDEQYNLPLGYRFSPRGNELITHYLIKKISGQQLPANIIREIDLYAFDPHQLPISEFKYGKPDEAYFFTRPGKR  108 (222)
Q Consensus        29 ~~~~~~~~~~~~LPpGfRF~PTDeELV~~YL~~Ki~g~pl~~~~I~~~Dvy~~~PweLp~~~~~~g~~~~wYFFt~~~~k  108 (222)
                      |+.+.+-..++.|||||||+|||||||.|||.+|+.|.|++.++|+++|||++|||+||+ ....+ +++||||+++.++
T Consensus         5 ~~~~~~~~~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~-~~~~~-~~~wyFft~~~~k   82 (166)
T d1ut7a_           5 GIQETDPLTQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPN-KALFG-EKEWYFFSPRDRK   82 (166)
T ss_dssp             CCC----CCSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHH-HSSSC-SSEEEEEEECCC-
T ss_pred             cccccCccccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccc-hhccC-cceEEEEeeeccc
Confidence            445555567899999999999999999999999999999999999999999999999998 65555 8899999998864


Q ss_pred             --------ccCCCceeecCCCCeeeecCCeeEEEEEEeeeecCCCCCCCCcCeEEEEEEeCCCCchhhhccccccccccc
Q 046940          109 --------RRTSSGYWKPTGRDLPILSGKAIVGFKRILIFYKGKAPRGIKTPWVVHEFRVNPLYFSAIRRNKLDEDVNAK  180 (222)
Q Consensus       109 --------R~~~~G~Wk~~g~~k~I~~~g~~vG~kr~l~F~~~~~~~~~kT~W~M~EY~l~~~~~~~~~~~~~~~~~~~~  180 (222)
                              |++++|+||++|+++.|.++|.+||+|++|+||+++.+++.+|+|+||||+|.+.....         ....
T Consensus        83 ~~~g~r~~R~~g~G~Wk~~g~~~~i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~---------~~~~  153 (166)
T d1ut7a_          83 YPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN---------GSTK  153 (166)
T ss_dssp             ------CCEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC----------------
T ss_pred             cCCCCccccccCCCEecccCCCceEecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCccccc---------Cccc
Confidence                    78999999999999999889999999999999999999999999999999998875421         1234


Q ss_pred             CCcEEEEEEEeec
Q 046940          181 VESYIACKIRYKR  193 (222)
Q Consensus       181 ~~~~VLCrI~~k~  193 (222)
                      .++|||||||+|+
T Consensus       154 ~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         154 LDDWVLCRIYKKQ  166 (166)
T ss_dssp             -CCEEEEEEEECC
T ss_pred             cCCEEEEEEEecC
Confidence            5789999999874