Citrus Sinensis ID: 046996

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360----
Protein Sequence
MSNNNESNDNENNDNKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSSMSAQSDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSDVTTVLGLSKQNVYRPNMASVSSALGLPPSLMEEQAASLTLVPNCTTTLFPVALSTSSSSAASSNATDEFHRLLAYQQASMNHQQQYYNYQHHHQQQQHHSHFPQLPPQSQP
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccEEEEcccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccEEEEEEEccccccccccccccccEEEEcccccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHcHHHHHHHccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHccccccccccccHHHHHHHHHHHHHccccccEEEEEEEEccccccccccHHccccccEEEEEccccccccccccccccccccEEEcccccccEcccccEEEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccHHHHcccccccccccccccccccccccccccHHHHHcHHcccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
msnnnesndnenndnkddhehdvvmpgfrfhpteEELVEFYLRRKVEGKRFNVELITfldlyrydpwelpalaaigekewffyvprdrkyrngdrpnrvttsgywkatgadrmiksensrsiglkktlvfysgkapkgirtswimneyrlpqhetERYQKAEISLCRvykrpgvedhpslprslptsrasssrsvssmsaqsdkrldphhhhqfgierfqalsgqssQQQMDIAAEkmstntdqtdrssscsdvttvlglskqnvyrpnmasvssalglppslmEEQAASltlvpnctttLFPValstssssaassnaTDEFHRLLAYQQASMNHQqqyynyqhhhqqqqhhshfpqlppqsqp
Flexible Loop (DISEMBL)
msnnnesndnenndnkddhehDVVMPGFRFHPTEEELVEFYLrrkvegkrfNVELITFLDLYRYDPWELPALAaigekewffyvprdrkyrngdrpnrvttsgywkatgadrmiksensrsiglkktlvfysgkapkgirtswimNEYRLPQHETERYQKAEISLCRVYKRpgvedhpslprslptsrasssrsVSSMSAQSDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMstntdqtdrssscsdvttvlglskqnvyrpNMASVSSALGLPPSLMEEQAASLTLVPNCTTTLFPVALSTSSSSAASSNATDEFHRLLAYQQASMNHQQQYYNYQHHHQQQQHHShfpqlppqsqp
Low Complexity Region (SEG)
MsnnnesndnenndnkddhehdVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHpslprslptsrasssrsvssmsaqsDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSDVTTVLGLSKQNVYRPNMASVSSALGLPPSLMEEQAASLTLVPNCTTTLFPValstssssaassnaTDEFHRLLAYQQASMNhqqqyynyqhhhqqqqhhshfpqlppqsqp
Disordered region (IsUnstruct)
***********************VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRN*****RVTTSGYWKATGADRMI******SIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYK***********************************************************************************************************************SLTLVPNCTTTLFPVAL******************LLAY************************************
Disordered Region (DISOPRED)
**************************GFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQ******QK*EISLCRVYK**************************************************************************************************************************************************************************************************
Disordered Region (DISEMBL)
*************DNKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVE********************************PHHHHQFGIERFQA*********************************TTVLGLSKQNVYRPNMASVSSALGLPPSLMEEQAASLTLVPNCTTTLFPVAL************TDEFHRLLAYQQASMNHQQQYYNY**********************
Disordered Region (DISPRO)
**********************VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPG**********************************************************DIAAEKM**********S*CSDVTTVLGLSKQNVYRPNMASVSSALGLPPSLMEEQAASLTLV***********************************Q**********************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSNNNESNDNENNDNKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSSMSAQSDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSDVTTVLGLSKQNVYRPNMASVSSALGLPPSLMEEQAASLTLVPNCTTTLFPVALSTSSSSAASSNATDEFHRLLAYQQASMNHQQQYYNYQHHHQQQQHHSHFPQLPPQSQP
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	364	2.2.26 [Sep-21-2011]
Q9ZVH0	418	Protein FEZ OS=Arabidopsi	no	no	0.560	0.488	0.464	2e-53
Q9FIW5	337	Putative NAC domain-conta	no	no	0.532	0.575	0.466	7e-53
Q9SK55	275	Transcription factor JUNG	no	no	0.480	0.636	0.508	8e-48
Q93VY3	297	NAC domain-containing pro	no	no	0.398	0.488	0.567	3e-47
Q9LDY8	317	NAC domain-containing pro	no	no	0.398	0.457	0.574	8e-47
Q9C932	317	NAC domain-containing pro	no	no	0.398	0.457	0.574	2e-46
Q8GY42	323	NAC transcription factor	no	no	0.401	0.452	0.537	7e-46
Q39013	289	NAC domain-containing pro	no	no	0.403	0.508	0.554	6e-45
Q52QH4	318	NAC domain-containing pro	no	no	0.530	0.606	0.431	7e-45
Q8H115	312	NAC domain-containing pro	no	no	0.464	0.541	0.491	7e-45

>sp|Q9ZVH0|FEZ_ARATH Protein FEZ OS=Arabidopsis thaliana GN=FEZ PE=2 SV=1

 Score =  210 bits (534), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 104/224 (46%), Positives = 142/224 (63%), Gaps = 20/224 (8%)

Query: 11  ENNDNKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELP 70
           + N++ D    DV++PGFRFHPT+EELV FYL+RKV+    ++ELI  LD+Y+YDPW+LP
Sbjct: 3   DRNNDGDQKMEDVLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLP 62

Query: 71  ALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI-KSENSRSIGLKKTLV 129
             A  GEKEW+FY PRDRKYRN  RPNRVT +G+WKATG DR I  SE ++ IGLKK+LV
Sbjct: 63  KFAMTGEKEWYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLV 122

Query: 130 FYSGKAPKGIRTSWIMNEYR-----LPQHETERYQKAEIS------LCRVYKRPGVEDH- 177
           FY G+A KG++T W+M+E+R      P   ++R+  + +S      +CR++K+       
Sbjct: 123 FYKGRAAKGVKTDWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLR 182

Query: 178 -------PSLPRSLPTSRASSSRSVSSMSAQSDKRLDPHHHHQF 214
                   SLP    T   S+ +  ++    SDK L P  H QF
Sbjct: 183 ALSHSFVSSLPPETSTDTMSNQKQSNTYHFSSDKILKPSSHFQF 226

Promotes periclinal root capforming cell divisions. Activates expression of its negative regulator SMB in a feedback loop for controlled switches in cell division plane.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=4 SV=1

 Score =  207 bits (528), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 105/225 (46%), Positives = 146/225 (64%), Gaps = 31/225 (13%)

Query: 9   DNENNDNKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWE 68
           D+E ++N + ++ DVV+PGFRFHPT+EELV FYL+RKV  K    +LI  +D+Y+YDPW+
Sbjct: 6   DDEESNNVERYD-DVVLPGFRFHPTDEELVSFYLKRKVLHKSLPFDLIKKVDIYKYDPWD 64

Query: 69  LPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKS-ENSRSIGLKKT 127
           LP LAA+GEKEW+FY PRDRKYRN  RPNRVT  G+WKATG DR I S +++R IGLKK+
Sbjct: 65  LPKLAAMGEKEWYFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDSTRCIGLKKS 124

Query: 128 LVFYSGKAPKGIRTSWIMNEYRLP-----------------QHETERYQKAEI------S 164
           LVFY G+A KG++T W+M+E+RLP                 QH        E+      +
Sbjct: 125 LVFYRGRAAKGVKTDWMMHEFRLPSLSDSHHSSYPNYNNKKQHLNNNNNSKELPSNDAWA 184

Query: 165 LCRVYKRP-GVEDHPSLPRS-----LPTSRASSSRSVSSMSAQSD 203
           +CR++K+   V    S+P+S     +P +   S  + +++ A SD
Sbjct: 185 ICRIFKKTNAVSSQRSIPQSWVYPTIPDNNQQSHNNTATLLASSD 229

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SK55|NAC42_ARATH Transcription factor JUNGBRUNNEN 1 OS=Arabidopsis thaliana GN=JUB1 PE=1 SV=1

 Score =  191 bits (485), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 93/183 (50%), Positives = 131/183 (71%), Gaps = 8/183 (4%)

Query: 10  NENNDNKD-DHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWE 68
            E N  KD + E++  +PGFRFHPT+EEL+ +YLRRKVE K   +ELI  +D+Y+YDPW+
Sbjct: 3   GEGNLGKDHEEENEAPLPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWD 62

Query: 69  LPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTL 128
           LP ++++GEKEW+F+  R RKYRN  RPNRVT SG+WKATG D+ + S N   +GLKK+L
Sbjct: 63  LPRVSSVGEKEWYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPVYS-NLDCVGLKKSL 121

Query: 129 VFYSGKAPKGIRTSWIMNEYRLPQ--HETERYQKAEI-SLCRVYKRPGVEDHPSLPRSLP 185
           V+Y G A KG +T W+M+E+RLP         Q+AE+ +LCR++KR   + +P++   LP
Sbjct: 122 VYYLGSAGKGTKTDWMMHEFRLPSTTKTDSPAQQAEVWTLCRIFKRVTSQRNPTI---LP 178

Query: 186 TSR 188
            +R
Sbjct: 179 PNR 181

Arabidopsis thaliana (taxid: 3702)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score =  189 bits (480), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 84/148 (56%), Positives = 112/148 (75%), Gaps = 3/148 (2%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRF+PT+EEL+  YL RKV G  F++++I  +DLY++DPW+LP+ A  GEKEW+F+ P
Sbjct: 16  PGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEWYFFSP 75

Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNRV  SGYWKATG D++I ++  R +G+KK LVFY+GKAPKG +T+WIM
Sbjct: 76  RDRKYPNGSRPNRVAGSGYWKATGTDKIITADG-RRVGIKKALVFYAGKAPKGTKTNWIM 134

Query: 146 NEYRLPQHETERYQKA--EISLCRVYKR 171
           +EYRL +H          +  LCR+YK+
Sbjct: 135 HEYRLIEHSRSHGSSKLDDWVLCRIYKK 162

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score =  187 bits (476), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 109/148 (73%), Gaps = 3/148 (2%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP+ A  GEKEW+F+ P
Sbjct: 16  PGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSP 75

Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 76  RDRKYPNGSRPNRVAGSGYWKATGTDKVISTE-GRRVGIKKALVFYIGKAPKGTKTNWIM 134

Query: 146 NEYRL--PQHETERYQKAEISLCRVYKR 171
           +EYRL  P       +  +  LCR+YK+
Sbjct: 135 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 162

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score =  186 bits (473), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 108/148 (72%), Gaps = 3/148 (2%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 16  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 75

Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 76  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 134

Query: 146 NEYRL--PQHETERYQKAEISLCRVYKR 171
           +EYRL  P       +  +  LCR+YK+
Sbjct: 135 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 162

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score =  184 bits (468), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 86/160 (53%), Positives = 107/160 (66%), Gaps = 14/160 (8%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRFHPT+EELV  YL++K +     V +I  +DLY++DPWELP+ A+ GE EW+F+ P
Sbjct: 18  PGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFFSP 77

Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNR  TSGYWKATG D+ I + NS  +G+KK LVFY GK PKGI+T WIM
Sbjct: 78  RDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKTDWIM 137

Query: 146 NEYRL-----------PQHETERYQKAEIS---LCRVYKR 171
           +EYRL           P   T R     +    LCR+YK+
Sbjct: 138 HEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKK 177

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score =  181 bits (460), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 86/155 (55%), Positives = 106/155 (68%), Gaps = 8/155 (5%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRFHPT+EELV  YL RK   +   V +I  +DLY+YDPWELP LA  GEKEW+F+ P
Sbjct: 9   PGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSP 68

Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNR   SGYWKATGAD+ I     + +G+KK LVFY+GKAPKG +T+WIM
Sbjct: 69  RDRKYPNGSRPNRSAGSGYWKATGADKPIGL--PKPVGIKKALVFYAGKAPKGEKTNWIM 126

Query: 146 NEYRLPQHETERYQKA------EISLCRVYKRPGV 174
           +EYRL   +    +K       +  LCR+Y + G 
Sbjct: 127 HEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGA 161

Arabidopsis thaliana (taxid: 3702)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  181 bits (459), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 98/227 (43%), Positives = 132/227 (58%), Gaps = 34/227 (14%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRFHPT+EELV  YL RKV  +   V +I  +DLY+ DPW+LP  A  G KEW+F+ P
Sbjct: 23  PGFRFHPTDEELVVHYLCRKVARQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTP 82

Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENS-RSIGLKKTLVFYSGKAPKGIRTSWI 144
           RDRKY NG RPNR    GYWKATGAD+ +  + S R++G+KK LVFYSGKAP+G++T WI
Sbjct: 83  RDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWI 142

Query: 145 MNEYRL------PQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSSM 198
           M+EYRL      P  +    +  E  LCR+Y +    +   L            + V+S+
Sbjct: 143 MHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEKVKL----------EQQDVASV 192

Query: 199 SAQSDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQT 245
           +A + +    +HHHQ G             + MD AA    +++ QT
Sbjct: 193 AAAAPR----NHHHQNG-------------EVMDAAAADTMSDSFQT 222

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score =  181 bits (459), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 88/179 (49%), Positives = 120/179 (67%), Gaps = 10/179 (5%)

Query: 27  GFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPR 86
           GFRFHPT+EELV+FYL R+   +  NV +I  +DLY+++PWELP +A  GEKEW+F+  R
Sbjct: 53  GFRFHPTDEELVKFYLCRRCASEPINVPVIAEIDLYKFNPWELPEMALYGEKEWYFFSHR 112

Query: 87  DRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMN 146
           DRKY NG RPNR   +GYWKATGAD+ I     +++G+KK LVFY+GKAPKGI+T+WIM+
Sbjct: 113 DRKYPNGSRPNRAAGTGYWKATGADKPIGK--PKTLGIKKALVFYAGKAPKGIKTNWIMH 170

Query: 147 EYRLPQ-------HETERYQKAEISLCRVYKRPG-VEDHPSLPRSLPTSRASSSRSVSS 197
           EYRL         ++    +  +  LCR+Y + G +E +       PT + S+S S  S
Sbjct: 171 EYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLPAAAEKPTEKMSTSDSRCS 229

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
255556683	421	NAC domain-containing protein, putative	0.876	0.757	0.663	1e-110
356564436	403	PREDICTED: uncharacterized protein LOC10	0.868	0.784	0.599	1e-110
224129830	382	NAC domain protein, IPR003441 [Populus t	0.763	0.727	0.688	1e-110
356520139	400	PREDICTED: putative NAC domain-containin	0.912	0.83	0.571	1e-107
225465304	377	PREDICTED: protein FEZ [Vitis vinifera]	0.835	0.806	0.665	1e-107
224070774	312	NAC domain protein, IPR003441 [Populus t	0.618	0.721	0.823	1e-107
217074048	434	unknown [Medicago truncatula]	0.901	0.755	0.594	1e-102
388511087	434	unknown [Medicago truncatula]	0.901	0.755	0.594	1e-101
449478299	311	PREDICTED: protein FEZ-like [Cucumis sat	0.478	0.559	0.948	5e-95
449432952	326	PREDICTED: protein FEZ-like [Cucumis sat	0.478	0.533	0.948	1e-94

>gi|255556683|ref|XP_002519375.1| NAC domain-containing protein, putative [Ricinus communis] gi|223541442|gb|EEF42992.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 239/360 (66%), Positives = 265/360 (73%), Gaps = 41/360 (11%)

Query: 23  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 82
           +VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF
Sbjct: 44  MVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 103

Query: 83  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 142
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI+SENSRSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 104 YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSENSRSIGLKKTLVFYSGKAPKGIRTS 163

Query: 143 WIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSSMSAQS 202
           WIMNEYRLPQHETERYQKAEISLCRVYKR GVEDHPSLPRS       SSR+ SS   QS
Sbjct: 164 WIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRS------LSSRASSSRGLQS 217

Query: 203 DKRLDPHHHHQFGIERFQAL--SGQSSQQQMDIAAEKMSTNTDQTDRSSSCSDVTTVLGL 260
           DK+L P    Q G+E FQ     GQS  QQ+++  EK+S  TD     SS SDVTT LGL
Sbjct: 218 DKKLQP---PQLGMESFQVFGGGGQSISQQIEL--EKISAETD----GSSSSDVTTALGL 268

Query: 261 SK-QNVYRPNMASVSSALGLPPSL--------MEEQAASLTLVP-NCTTTLFPVALSTSS 310
           SK  NVY P + ++S++LGLP ++        + +   + +LVP N    LF      + 
Sbjct: 269 SKPANVYHP-VPAISTSLGLPATIEEEAEEIFLNQSRQACSLVPNNNNNNLF------TG 321

Query: 311 SSAASSNATDEFHRLLAY-QQASMNHQQQYYN------YQHHHQQQQHHSHFPQLPPQSQ 363
           SS+ SSN  D+ HRL+ Y Q      QQQYYN      +Q   QQQ  HS F  + PQSQ
Sbjct: 322 SSSVSSNPVDDLHRLVNYQQACISQQQQQYYNTHHHQHHQQQQQQQHQHSQFSIMAPQSQ 381

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564436|ref|XP_003550460.1| PREDICTED: uncharacterized protein LOC100792622 [Glycine max]

 Score =  404 bits (1038), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/352 (59%), Positives = 248/352 (70%), Gaps = 36/352 (10%)

Query: 14  DNKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALA 73
           D+ DDHEHD+VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALA
Sbjct: 36  DDNDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALA 95

Query: 74  AIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSG 133
           AIGEKEW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++EN RSIGLKKTLVFYSG
Sbjct: 96  AIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRSIGLKKTLVFYSG 155

Query: 134 KAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSR 193
           KAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKR GVEDHPSLPR LPT R SSSR
Sbjct: 156 KAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAGVEDHPSLPRCLPT-RPSSSR 214

Query: 194 SVSSMSAQSDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSD 253
           +    S  ++K+ +    H   +     L   +++  +           D+ + + + SD
Sbjct: 215 A----SHDNNKKHNEMVQHNINMGFVGQLKPPTTEHIV-----------DKINETEASSD 259

Query: 254 VTTVLGLSKQN-VYRPNMASVSSALGLPPSLMEEQAASLTL------VPNCTTTLFPVAL 306
           V T LGLSK N  YR  M ++S+ + LP   M+ +   + +            T+F    
Sbjct: 260 VNTALGLSKYNAAYRAAMGALSTTMALPVVPMDHEEGLMMMQQQSKQAAAHVPTIFSAGP 319

Query: 307 STSSSSAASSNATDEFHRLLAYQQASMNHQQQYYNYQHHHQQQQHHSHFPQL 358
           S+S++S   +   D+ +RL++Y       QQQYYN     Q Q H + F  L
Sbjct: 320 SSSNNSGVVN--MDDLNRLMSY-------QQQYYNV----QSQSHPNQFSTL 358

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129830|ref|XP_002328813.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222839111|gb|EEE77462.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 217/315 (68%), Positives = 240/315 (76%), Gaps = 37/315 (11%)

Query: 23  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 82
           +VMPGFRF PTEEEL+EFYLRRKVEGK FNVELITFLDLY YDPWELPALAAIGEKEWFF
Sbjct: 27  MVMPGFRFRPTEEELIEFYLRRKVEGKHFNVELITFLDLYSYDPWELPALAAIGEKEWFF 86

Query: 83  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 142
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++ENSRSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 87  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRAENSRSIGLKKTLVFYSGKAPKGIRTS 146

Query: 143 WIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSSMSAQS 202
           WIMNEYRLPQHETERYQKAEISLC VYKR G+EDHPSLPRS+P SRASSSR       QS
Sbjct: 147 WIMNEYRLPQHETERYQKAEISLCCVYKRAGIEDHPSLPRSIP-SRASSSRGT-----QS 200

Query: 203 DKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSDVTTVLGLSK 262
           DK+    H     ++ FQ   GQSSQQ   I  EKMS    +TD S S SDVTT LGLS+
Sbjct: 201 DKK----HQSHVTVKGFQPFLGQSSQQ---IEMEKMS----ETDASGS-SDVTTALGLSQ 248

Query: 263 QNV--YRPNMASVSSALGLPPSLME-------EQAASLTLVPNCTTTLFPVALSTSSSSA 313
            N+  Y P    +S+++ LP S+ E       +QAAS  LVPNC        L T +SS 
Sbjct: 249 HNINAYHP----ISTSIELPASVEEGMFLNQTKQAASSFLVPNCPN------LFTVTSSV 298

Query: 314 ASSNATDEFHRLLAY 328
           +S+   D+ HRL+ Y
Sbjct: 299 SSNPVYDDLHRLINY 313

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356520139|ref|XP_003528722.1| PREDICTED: putative NAC domain-containing protein 94-like [Glycine max]

 Score =  396 bits (1017), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 217/380 (57%), Positives = 253/380 (66%), Gaps = 48/380 (12%)

Query: 1   MSNNNESNDNENNDNK-----DDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVEL 55
           +S++    D   NDNK     DDHEHD+VMPGFRFHPTEEELVEFYLRRKVEGKRFNVEL
Sbjct: 14  LSHSQSQEDATTNDNKPVVVDDDHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVEL 73

Query: 56  ITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIK 115
           ITFLDLYRYDPWELPALAAIGEKEW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI+
Sbjct: 74  ITFLDLYRYDPWELPALAAIGEKEWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIR 133

Query: 116 SENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVE 175
           +EN RSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKR GVE
Sbjct: 134 TENFRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRAGVE 193

Query: 176 DHPSLPRSLPT----SRASSSRSVSSMSAQSDKRLDPHHHHQFGIERFQALSGQSSQQQM 231
           DHPSLPR LPT    S  +SS  +++  +     +  HH+   G   F   S   + + +
Sbjct: 194 DHPSLPRCLPTRPSSSSRASSDHINNNKSTKHNEMVQHHNINMG---FMGQSKPPTTEHI 250

Query: 232 DIAAEKMSTNTDQTDRSSSCSDVTTVLGLSKQNVYRPNMASVSSALGLPPSLMEEQAASL 291
                      D+ + S + SDV T LGLSK N YR      ++ + LP   M+E+A  +
Sbjct: 251 ----------VDKINESEASSDVNTTLGLSKYNAYR------AATMALPVVPMDEEALMM 294

Query: 292 -------TLVPNCTTTLFPVALSTSSSSAASSNATDEFHRLLAYQQASMNHQQQYYNYQH 344
                          T+F    S+S++S   +   D+ +RL++Y       Q QYYN   
Sbjct: 295 MQQSKQAAAAAAHVPTIFSAGPSSSNNSGVVN--MDDLNRLMSY-------QHQYYNV-- 343

Query: 345 HHQQQQHHSHFPQLPPQSQP 364
             Q Q H + F  L  Q  P
Sbjct: 344 --QSQSHPNQFSTLLMQPSP 361

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225465304|ref|XP_002271971.1| PREDICTED: protein FEZ [Vitis vinifera]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 223/335 (66%), Positives = 249/335 (74%), Gaps = 31/335 (9%)

Query: 14  DNKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALA 73
           DNKD+HEHD+VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELIT LDLYRYDPWELPALA
Sbjct: 11  DNKDEHEHDMVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITSLDLYRYDPWELPALA 70

Query: 74  AIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSG 133
           AIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++EN R IGLKKTLVFYSG
Sbjct: 71  AIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENFRPIGLKKTLVFYSG 130

Query: 134 KAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSR 193
           KAPKGIRTSWIMNEYRLPQ ETER QKAEISLCRVYKR GVEDHPS        R+  SR
Sbjct: 131 KAPKGIRTSWIMNEYRLPQQETERSQKAEISLCRVYKRAGVEDHPS------LPRSLPSR 184

Query: 194 SVSSMSAQSDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSD 253
             SS   Q+DKR      H   IERFQA  GQS Q +M    EKM   ++     SS +D
Sbjct: 185 PSSSRGLQADKRQQDAAQH--AIERFQAFGGQSQQVEM----EKMIGESE----GSSSTD 234

Query: 254 VTTVLGLSKQNVYRPNMASVSSALGLPPS-------LMEEQAASLTLVPNCTTTLFPVAL 306
           VTT LGLS+QN Y   + ++S+ L  PP+       L+     + +LVP   TTLF    
Sbjct: 235 VTTALGLSQQNAYG-AIPALSATLA-PPAPEEEDRLLLHHSKQACSLVPPACTTLF---- 288

Query: 307 STSSSSAASSNATDEFHRLLAYQQASMNHQQQYYN 341
             + SS+   +A D+ HRL+ YQQAS+N QQQY+N
Sbjct: 289 --TGSSSLPPHAVDDLHRLVNYQQASINQQQQYHN 321

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224070774|ref|XP_002303230.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222840662|gb|EEE78209.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 200/243 (82%), Positives = 207/243 (85%), Gaps = 18/243 (7%)

Query: 23  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 82
           +VMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF
Sbjct: 1   MVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 60

Query: 83  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 142
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++ENSRSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 61  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTENSRSIGLKKTLVFYSGKAPKGIRTS 120

Query: 143 WIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSSMSAQS 202
           WIMNEYRLP HETERYQK EISLCRVYKR GVEDHPSLPRSLP SRASSSR       QS
Sbjct: 121 WIMNEYRLPHHETERYQKVEISLCRVYKRAGVEDHPSLPRSLP-SRASSSR-----GPQS 174

Query: 203 DKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSDVTTVLGLSK 262
           DK+    H     +ERFQ   GQSSQQ   I  EKMS    +TD SSS SDVTT LGLSK
Sbjct: 175 DKK----HQSHLTLERFQPFVGQSSQQ---IEMEKMS----ETDASSS-SDVTTALGLSK 222

Query: 263 QNV 265
            N+
Sbjct: 223 HNI 225

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217074048|gb|ACJ85384.1| unknown [Medicago truncatula]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 220/370 (59%), Positives = 249/370 (67%), Gaps = 42/370 (11%)

Query: 19  HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK 78
           HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK
Sbjct: 49  HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK 108

Query: 79  EWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKG 138
           EW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADR I++EN RSIGLKKTLVFYSGKAPKG
Sbjct: 109 EWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRTIRTENFRSIGLKKTLVFYSGKAPKG 168

Query: 139 IRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSSM 198
           IRTSWIMNEYRLPQHETERYQK EISLCRVYKR GVEDHPSLPR LP +R SSS S    
Sbjct: 169 IRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSSSSRGT 228

Query: 199 SA-QSDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSD-VTT 256
           +A  SDK     +  Q  I     + GQS +   D    KM  ++     S   SD VTT
Sbjct: 229 TASHSDK-----NKQQNEILGMGFVVGQSPKTIDDHIVNKMEGSS-----SGGNSDHVTT 278

Query: 257 VLGLSK-QNVYRPNMASVSSALGL---------PPSLMEEQAASLTLVPNC---TTTLFP 303
            LGLSK  N   P         GL         P  L++  AA  +L+ +       +FP
Sbjct: 279 TLGLSKYSNTPPPTNYRSEEEEGLMIMQQQQHQPRHLVQYSAAGNSLLVSAGGGGGVIFP 338

Query: 304 VALSTSSSSAASSNAT------DEFHRLLAYQQASMNHQQQYYNYQHHHQQQQHHSHF-- 355
           V+ S +++ + S+ AT      D+ +RL++YQQ     QQ  YN Q+ H    + +H   
Sbjct: 339 VSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQ-----QQYCYNVQNPHLNHPNPNHLST 393

Query: 356 ----PQLPPQ 361
               P LP Q
Sbjct: 394 LLMQPMLPNQ 403

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388511087|gb|AFK43609.1| unknown [Medicago truncatula]

 Score =  375 bits (964), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/370 (59%), Positives = 249/370 (67%), Gaps = 42/370 (11%)

Query: 19  HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK 78
           HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK
Sbjct: 49  HEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK 108

Query: 79  EWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKG 138
           EW+FYVPRDRKYRNGDRPNRVTTSGYWKATGADR I++EN RSIGLKKTLVFYSGKAPKG
Sbjct: 109 EWYFYVPRDRKYRNGDRPNRVTTSGYWKATGADRTIRTENFRSIGLKKTLVFYSGKAPKG 168

Query: 139 IRTSWIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSSM 198
           IRTSWIMNEYRLPQHETERYQK EISLCRVYKR GVEDHPSLPR LP +R SSS S    
Sbjct: 169 IRTSWIMNEYRLPQHETERYQKGEISLCRVYKRAGVEDHPSLPRCLPITRPSSSSSSRGT 228

Query: 199 SA-QSDKRLDPHHHHQFGIERFQALSGQSSQQQMDIAAEKMSTNTDQTDRSSSCSD-VTT 256
           +A  SDK     +  Q  I     + GQS +   D    KM  ++     S   SD VTT
Sbjct: 229 TASHSDK-----NKQQNEILGMGFVVGQSPKTIDDHIVNKMEGSS-----SGGNSDHVTT 278

Query: 257 VLGLSK-QNVYRPNMASVSSALGL---------PPSLMEEQAASLTLVPNC---TTTLFP 303
            LGLSK  N   P         GL         P  L++  AA  +L+ +       +FP
Sbjct: 279 TLGLSKYSNTPPPTNYRSEEEEGLMIMQQQQHQPRHLVQYSAAGNSLLVSAGGGGGVIFP 338

Query: 304 VALSTSSSSAASSNAT------DEFHRLLAYQQASMNHQQQYYNYQHHHQQQQHHSHF-- 355
           V+ S +++ + S+ AT      D+ +RL++YQQ     QQ  YN Q+ H    + +H   
Sbjct: 339 VSASAAAAVSCSNTATSAAMMMDDLNRLVSYQQ-----QQYCYNVQNPHFNHPNPNHLFT 393

Query: 356 ----PQLPPQ 361
               P LP Q
Sbjct: 394 LLMQPMLPNQ 403

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449478299|ref|XP_004155277.1| PREDICTED: protein FEZ-like [Cucumis sativus]

 Score =  353 bits (907), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 166/175 (94%), Positives = 169/175 (96%), Gaps = 1/175 (0%)

Query: 23  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 82
           VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF
Sbjct: 47  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 106

Query: 83  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 142
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++E+ RSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 107 YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTEDFRSIGLKKTLVFYSGKAPKGIRTS 166

Query: 143 WIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSS 197
           WIMNEYRLP HETERYQKAEISLCRVYKR GVEDHPSLPRSLP SRASSSR  SS
Sbjct: 167 WIMNEYRLPHHETERYQKAEISLCRVYKRAGVEDHPSLPRSLP-SRASSSRMTSS 220

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449432952|ref|XP_004134262.1| PREDICTED: protein FEZ-like [Cucumis sativus]

 Score =  352 bits (904), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 166/175 (94%), Positives = 169/175 (96%), Gaps = 1/175 (0%)

Query: 23  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 82
           VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF
Sbjct: 26  VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 85

Query: 83  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 142
           YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI++E+ RSIGLKKTLVFYSGKAPKGIRTS
Sbjct: 86  YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRTEDFRSIGLKKTLVFYSGKAPKGIRTS 145

Query: 143 WIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHPSLPRSLPTSRASSSRSVSS 197
           WIMNEYRLP HETERYQKAEISLCRVYKR GVEDHPSLPRSLP SRASSSR  SS
Sbjct: 146 WIMNEYRLPHHETERYQKAEISLCRVYKRAGVEDHPSLPRSLP-SRASSSRMTSS 199

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	364
TAIR|locus:2056266	414	LOV1 "LONG VEGETATIVE PHASE 1"	0.659	0.579	0.651	6.4e-83
TAIR|locus:2202820	418	FEZ "FEZ" [Arabidopsis thalian	0.409	0.356	0.552	1.1e-46
TAIR|locus:2827676	276	NAC036 "NAC domain containing	0.401	0.528	0.569	1.1e-46
TAIR|locus:2045570	275	NAC042 "NAC domain containing	0.401	0.530	0.566	1.5e-44
TAIR|locus:2009729	631	NAC028 "NAC domain containing	0.398	0.229	0.533	1.8e-44
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.398	0.457	0.574	3.1e-44
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.398	0.457	0.574	6.4e-44
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.409	0.515	0.554	9.3e-43
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.401	0.452	0.537	9.3e-43
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.401	0.456	0.540	1.9e-42

TAIR|locus:2056266 LOV1 "LONG VEGETATIVE PHASE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
 Identities = 161/247 (65%), Positives = 182/247 (73%)

Query:    23 VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 82
             +VMPGFRFHPTEEEL+EFYLRRKVEGKRFNVELITFLDLYRYDPWELPA+AAIGEKEW+F
Sbjct:    50 MVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWYF 109

Query:    83 YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTS 142
             YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI+SE SR IGLKKTLVFYSGKAPKG RTS
Sbjct:   110 YVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRSETSRPIGLKKTLVFYSGKAPKGTRTS 169

Query:   143 WIMNEYRLPQHETERYQKAEISLCRVYKRPGVEDHXXXXXXXXXXXXXXXXXXXXXXXXX 202
             WIMNEYRLP HETE+YQKAEISLCRVYKRPGVEDH                         
Sbjct:   170 WIMNEYRLPHHETEKYQKAEISLCRVYKRPGVEDHPSVPRSLSTRHHNHNSSTSSRLALR 229

Query:   203 DKRLDPHHHHQFGIERFQALSGQSSQQQMD-IAAEKMSTNTDQTDRSSSCSDVTTVLGLS 261
              ++    HH          L+  ++   ++ ++ E     +  T  ++S SDVT  + L+
Sbjct:   230 QQQ----HHSSSSNHSDNNLNNNNNINNLEKLSTEYSGDGSTTTTTTNSNSDVT--IALA 283

Query:   262 KQNVYRP 268
              QN+YRP
Sbjct:   284 NQNIYRP 290

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2202820 FEZ "FEZ" [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 89/161 (55%), Positives = 120/161 (74%)

Query:    23 VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 82
             V++PGFRFHPT+EELV FYL+RKV+    ++ELI  LD+Y+YDPW+LP  A  GEKEW+F
Sbjct:    15 VLLPGFRFHPTDEELVSFYLKRKVQHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKEWYF 74

Query:    83 YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI-KSENSRSIGLKKTLVFYSGKAPKGIRT 141
             Y PRDRKYRN  RPNRVT +G+WKATG DR I  SE ++ IGLKK+LVFY G+A KG++T
Sbjct:    75 YCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGNKCIGLKKSLVFYKGRAAKGVKT 134

Query:   142 SWIMNEYRLPQHE-----TERYQKAEIS------LCRVYKR 171
              W+M+E+RLP        ++R+  + +S      +CR++K+
Sbjct:   135 DWMMHEFRLPSLSEPSPPSKRFFDSPVSPNDSWAICRIFKK 175

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0045770 "positive regulation of asymmetric cell division" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2827676 NAC036 "NAC domain containing protein 36" [Arabidopsis thaliana (taxid:3702)]

 Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
 Identities = 86/151 (56%), Positives = 118/151 (78%)

Query:    23 VVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFF 82
             + +PGFRFHPTEEEL++FYL+  V GKR +VE+I FL++YR+DPW+LP L+ IGE+EW+F
Sbjct:     5 IELPGFRFHPTEEELLDFYLKNMVYGKRSSVEVIGFLNIYRHDPWDLPGLSRIGEREWYF 64

Query:    83 YVPRDRKYRNGDRPNRVTTSGYWKATGADRMI--KSENSRSIGLKKTLVFYSGKAPKGIR 140
             +VPR+RK+ NG RP+R T  GYWKATG+DR I   SE  R IGLKKTLVFY G+AP G +
Sbjct:    65 FVPRERKHGNGGRPSRTTEKGYWKATGSDRKIISLSEPKRVIGLKKTLVFYRGRAPGGSK 124

Query:   141 TSWIMNEYRLPQHETERYQKAEISLCRVYKR 171
             T W+MNE+R+P + +      ++ LC++Y++
Sbjct:   125 TDWVMNEFRMPDNCS---LPKDVVLCKIYRK 152

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010200 "response to chitin" evidence=IEP

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0045792 "negative regulation of cell size" evidence=IMP

GO:0048281 "inflorescence morphogenesis" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009814 "defense response, incompatible interaction" evidence=RCA

TAIR|locus:2045570 NAC042 "NAC domain containing protein 42" [Arabidopsis thaliana (taxid:3702)]

 Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
 Identities = 85/150 (56%), Positives = 117/150 (78%)

Query:    25 MPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYV 84
             +PGFRFHPT+EEL+ +YLRRKVE K   +ELI  +D+Y+YDPW+LP ++++GEKEW+F+ 
Sbjct:    19 LPGFRFHPTDEELLGYYLRRKVENKTIKLELIKQIDIYKYDPWDLPRVSSVGEKEWYFFC 78

Query:    85 PRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWI 144
              R RKYRN  RPNRVT SG+WKATG D+ + S N   +GLKK+LV+Y G A KG +T W+
Sbjct:    79 MRGRKYRNSVRPNRVTGSGFWKATGIDKPVYS-NLDCVGLKKSLVYYLGSAGKGTKTDWM 137

Query:   145 MNEYRLPQH-ETER-YQKAEI-SLCRVYKR 171
             M+E+RLP   +T+   Q+AE+ +LCR++KR
Sbjct:   138 MHEFRLPSTTKTDSPAQQAEVWTLCRIFKR 167

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010120 "camalexin biosynthetic process" evidence=IMP

GO:0005992 "trehalose biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0042538 "hyperosmotic salinity response" evidence=IMP

GO:1900056 "negative regulation of leaf senescence" evidence=IMP

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2009729 NAC028 "NAC domain containing protein 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 445 (161.7 bits), Expect = 1.8e-44, Sum P(2) = 1.8e-44
 Identities = 80/150 (53%), Positives = 108/150 (72%)

Query:    26 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEK--EWFFY 83
             PGFRFHPT+EELV +YL+RK+ G+   +E+I  +DLY+ +PW+LP  + +  K  EWFF+
Sbjct:     8 PGFRFHPTDEELVIYYLKRKINGRTIELEIIPEIDLYKCEPWDLPGKSLLPSKDLEWFFF 67

Query:    84 VPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSW 143
              PRDRKY NG R NR T +GYWKATG DR + S +SR +G KKTLV+Y G+AP G RT W
Sbjct:    68 SPRDRKYPNGSRTNRATKAGYWKATGKDRKVTS-HSRMVGTKKTLVYYRGRAPHGSRTDW 126

Query:   144 IMNEYRLPQHETERYQKAE--ISLCRVYKR 171
             +M+EYRL + E +     +   +LCRV+K+
Sbjct:   127 VMHEYRLEEQECDSKSGIQDAYALCRVFKK 156

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
 Identities = 85/148 (57%), Positives = 109/148 (73%)

Query:    26 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
             PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP+ A  GEKEW+F+ P
Sbjct:    16 PGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEWYFFSP 75

Query:    86 RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
             RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct:    76 RDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRR-VGIKKALVFYIGKAPKGTKTNWIM 134

Query:   146 NEYRL--PQHETERYQKAEISLCRVYKR 171
             +EYRL  P       +  +  LCR+YK+
Sbjct:   135 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
 Identities = 85/148 (57%), Positives = 108/148 (72%)

Query:    26 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
             PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct:    16 PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 75

Query:    86 RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
             RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct:    76 RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 134

Query:   146 NEYRL--PQHETERYQKAEISLCRVYKR 171
             +EYRL  P       +  +  LCR+YK+
Sbjct:   135 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 87/157 (55%), Positives = 108/157 (68%)

Query:    26 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
             PGFRFHPT+EELV  YL RK   +   V +I  +DLY+YDPWELP LA  GEKEW+F+ P
Sbjct:     9 PGFRFHPTDEELVMHYLCRKCASQSIAVPIIAEIDLYKYDPWELPGLALYGEKEWYFFSP 68

Query:    86 RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
             RDRKY NG RPNR   SGYWKATGAD+ I     + +G+KK LVFY+GKAPKG +T+WIM
Sbjct:    69 RDRKYPNGSRPNRSAGSGYWKATGADKPIGLP--KPVGIKKALVFYAGKAPKGEKTNWIM 126

Query:   146 NEYRLPQHETE-RYQKAEISL-----CRVYKRPGVED 176
             +EYRL   +   R +K  + L     CR+Y + G  +
Sbjct:   127 HEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATE 163

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
 Identities = 86/160 (53%), Positives = 107/160 (66%)

Query:    26 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
             PGFRFHPT+EELV  YL++K +     V +I  +DLY++DPWELP+ A+ GE EW+F+ P
Sbjct:    18 PGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYFFSP 77

Query:    86 RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
             RDRKY NG RPNR  TSGYWKATG D+ I + NS  +G+KK LVFY GK PKGI+T WIM
Sbjct:    78 RDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVKKALVFYGGKPPKGIKTDWIM 137

Query:   146 NEYRL-----------PQHETERYQKAEIS---LCRVYKR 171
             +EYRL           P   T R     +    LCR+YK+
Sbjct:   138 HEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKK 177

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
 Identities = 86/159 (54%), Positives = 110/159 (69%)

Query:    26 PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
             PGFRFHPT+EELV  YL+RK +     V +I  +DLY++DPWELPA A+ GE+EW+F+ P
Sbjct:    19 PGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLYKFDPWELPAKASFGEQEWYFFSP 78

Query:    86 RDRKYRNGDRPNRVTTSGYWKATGADRMIKSEN---SRSIGLKKTLVFYSGKAPKGIRTS 142
             RDRKY NG RPNR  TSGYWKATG D+ + S     S+ +G+KK LVFYSGK PKG+++ 
Sbjct:    79 RDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSD 138

Query:   143 WIMNEYRL----PQHETERYQKA------EISLCRVYKR 171
             WIM+EYRL    P H  +   K       +  LCR+YK+
Sbjct:   139 WIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKK 177

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035370001 SubName- Full=Chromosome undetermined scaffold_77, whole genome shotgun sequence; (377 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	364
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	7e-75

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  227 bits (581), Expect = 7e-75
 Identities = 73/128 (57%), Positives = 98/128 (76%), Gaps = 2/128 (1%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELP-ALAAIGEKEWFFY 83
           PGFRFHPT+EELV +YL+RKV GK   + ++I  +D+Y+++PW+LP   A  G++EW+F+
Sbjct: 3   PGFRFHPTDEELVVYYLKRKVLGKPLPLLDVIPEVDIYKFEPWDLPDGKAKGGDREWYFF 62

Query: 84  VPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSW 143
            PRDRKY NG R NR T SGYWKATG D+ + S+    +G+KKTLVFY G+APKG +T W
Sbjct: 63  SPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGMKKTLVFYKGRAPKGEKTDW 122

Query: 144 IMNEYRLP 151
           +M+EYRL 
Sbjct: 123 VMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	364
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=6.8e-43  Score=298.84  Aligned_cols=128  Identities=53%  Similarity=1.068  Sum_probs=97.5

Q ss_pred             CCCCceecCChHHHHHHHHHHHHcCCCCCc-cceeeccCCCCCCCCccccccCCceeEEEEeecCCcCCCCCCCcccccc
Q 046996           24 VMPGFRFHPTEEELVEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTS  102 (364)
Q Consensus        24 LPPGfRF~PTDEELV~~YLr~Ki~G~plp~-~~I~evDVY~~ePwdLP~~~~~Ge~eWYFFspr~rK~~nG~R~~R~tgg  102 (364)
                      |||||||+|||+|||.+||++|+.|.+++. .+|+++|||++|||+||+....++++||||+++++++.+|.|++|++++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~   80 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGG   80 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETT
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccc
Confidence            799999999999999999999999999887 6899999999999999964444677999999999999999999999999


Q ss_pred             ceEeecCCCceEecCCCceEEEEEEEEeecCCCCCCCCcCeEEEEEecC
Q 046996          103 GYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLP  151 (364)
Q Consensus       103 G~WK~tG~~k~I~~~~G~vVG~KKtL~Fy~Gk~pkg~kTgWvMhEY~L~  151 (364)
                      |+||.+|+.+.|.+.+|.+||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        81 G~Wk~~g~~~~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   81 GYWKSTGKEKPIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEEEECEEEEEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             eEEeecccccccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            9999999999999877899999999999998888889999999999983

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	364
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		5e-46
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		5e-46
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		2e-43

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  181 bits (459), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 78
Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 79  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 137
Query: 146 NEYRL--PQHETERYQKAEISLCRVYKR 171
           +EYRL  P       +  +  LCR+YK+
Sbjct: 138 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  181 bits (459), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 85/148 (57%), Positives = 108/148 (72%), Gaps = 3/148 (2%)
Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 22  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 81
Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 82  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 140
Query: 146 NEYRL--PQHETERYQKAEISLCRVYKR 171
           +EYRL  P       +  +  LCR+YK+
Sbjct: 141 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 168

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  173 bits (438), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/153 (52%), Positives = 106/153 (69%), Gaps = 8/153 (5%)
Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRFHPT++ELVE YL RK  G+R  V +I  +DLY++DPW+LP  A  G +EW+F+ P
Sbjct: 17  PGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTP 76
Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNR   +GYWKATGAD+ + +   R++G+KK LVFY+GKAP+G++T WIM
Sbjct: 77  RDRKYPNGSRPNRAAGNGYWKATGADKPV-APRGRTLGIKKALVFYAGKAPRGVKTDWIM 135
Query: 146 NEYRLPQHETERYQKAEIS-------LCRVYKR 171
           +EYRL           + S       LCR+Y +
Sbjct: 136 HEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNK 168

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	364
1ut7_A	171	No apical meristem protein; transcription regulati	1e-90
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	3e-90
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  268 bits (688), Expect = 1e-90
 Identities = 82/150 (54%), Positives = 107/150 (71%), Gaps = 3/150 (2%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 78

Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNRV  SGYWKATG D++I +   + +G+KK LVFY GKAPKG +T+WIM
Sbjct: 79  RDRKYPNGSRPNRVAGSGYWKATGTDKIIST-EGQRVGIKKALVFYIGKAPKGTKTNWIM 137

Query: 146 NEYRLPQHETERY--QKAEISLCRVYKRPG 173
           +EYRL +        +  +  LCR+YK+  
Sbjct: 138 HEYRLIEPSRRNGSTKLDDWVLCRIYKKQS 167

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  267 bits (684), Expect = 3e-90
 Identities = 80/166 (48%), Positives = 107/166 (64%), Gaps = 8/166 (4%)

Query: 15  NKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAA 74
            +D      + PGFRFHPT++ELVE YL RK  G+R  V +I  +DLY++DPW+LP  A 
Sbjct: 6   ERDAEAELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERAL 65

Query: 75  IGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGK 134
            G +EW+F+ PRDRKY NG RPNR   +GYWKATGAD+ +     R++G+KK LVFY+GK
Sbjct: 66  FGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAP-RGRTLGIKKALVFYAGK 124

Query: 135 APKGIRTSWIMNEYRLPQHETERYQKA-------EISLCRVYKRPG 173
           AP+G++T WIM+EYRL                  +  LCR+Y +  
Sbjct: 125 APRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKN 170

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 63/429 (14%), Positives = 124/429 (28%), Gaps = 120/429 (27%)

Query: 5   NESNDNENNDNKDDHEHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRY 64
            E  D   NDN+   +++V     R  P  +      LR+ +   R    ++    +   
Sbjct: 113 IEQRDRLYNDNQVFAKYNVS----RLQPYLK------LRQALLELRPAKNVL----ID-- 156

Query: 65  DPWELPALAAIGEKEWF-FYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIG 123
                  +   G K W    V    K +      ++    +W        +  +N  S  
Sbjct: 157 ------GVLGSG-KTWVALDVCLSYKVQCK-MDFKI----FW--------LNLKNCNSPE 196

Query: 124 --LKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETERYQKAEISLCRVYKRP-----GVED 176
             L+          P     S   +  +L  H  +   +  +   + Y+        V++
Sbjct: 197 TVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS-KPYENCLLVLLNVQN 255

Query: 177 HPSLP------RSLPTSRASSSRSVSSMSAQSDKRLDPHHHHQFGIERFQALS------G 224
             +        + L T+R        S +  +   LD   HH   +   +  S       
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD---HHSMTLTPDEVKSLLLKYLD 312

Query: 225 QSSQ-----------QQMDIAAEKMSTNTDQTD--RSSSCSDVTTVLGLS--------KQ 263
              Q           +++ I AE +       D  +  +C  +TT++  S         +
Sbjct: 313 CRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372

Query: 264 NVYR-----PNMASVSSAL------GLPPSLMEEQAASL---TLV----PNCTTTLFPVA 305
            ++      P  A + + L       +  S +      L   +LV       T ++  + 
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432

Query: 306 LSTSSSSAASSNATDEFHRLL--AYQQA--------SMNHQQQYYNYQH--HH----QQQ 349
           L                HR +   Y              +  QY+ Y H  HH    +  
Sbjct: 433 LELK----VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF-YSHIGHHLKNIEHP 487

Query: 350 QHHSHFPQL 358
           +  + F  +
Sbjct: 488 ERMTLFRMV 496

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	364
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=7.5e-54  Score=386.74  Aligned_cols=153  Identities=52%  Similarity=1.070  Sum_probs=134.8

Q ss_pred             CCCCCCCCceecCChHHHHHHHHHHHHcCCCCCccceeeccCCCCCCCCccccccCCceeEEEEeecCCcCCCCCCCccc
Q 046996           20 EHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRV   99 (364)
Q Consensus        20 ~~~~LPPGfRF~PTDEELV~~YLr~Ki~G~plp~~~I~evDVY~~ePwdLP~~~~~Ge~eWYFFspr~rK~~nG~R~~R~   99 (364)
                      ....|||||||+|||||||.+||++|+.|.+++.++|.++|||++|||+||+.+..|+++||||+++++||++|.|++|+
T Consensus        11 ~~~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~   90 (174)
T 3ulx_A           11 AELNLPPGFRFHPTDDELVEHYLCRKAAGQRLPVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRA   90 (174)
T ss_dssp             STTTCCTTCCCCCCHHHHHHHTHHHHHHTCCCSSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCEE
T ss_pred             cccCCCCcceeCCCHHHHHHHHHHHHhcCCCCCcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCceee
Confidence            34579999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             cccceEeecCCCceEecCCCceEEEEEEEEeecCCCCCCCCcCeEEEEEecCCCCccc-------ccCCcEEEEEEEecC
Q 046996          100 TTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETER-------YQKAEISLCRVYKRP  172 (364)
Q Consensus       100 tggG~WK~tG~~k~I~~~~G~vVG~KKtL~Fy~Gk~pkg~kTgWvMhEY~L~~~~~~~-------~~~~e~VLCRIykK~  172 (364)
                      +++||||++|++++|... |.+||+||+|+||.|+++++.||+|+||||+|.......       ...++|||||||+|+
T Consensus        91 t~~G~WkatG~dk~I~~~-g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~  169 (174)
T 3ulx_A           91 AGNGYWKATGADKPVAPR-GRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKK  169 (174)
T ss_dssp             ETTEEEEECSCCEEECCS-SSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESC
T ss_pred             cCCceEccCCCCcEEeeC-CcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcC
Confidence            999999999999999864 789999999999999999999999999999998754321       245789999999986


Q ss_pred             C
Q 046996          173 G  173 (364)
Q Consensus       173 ~  173 (364)
                      +
T Consensus       170 ~  170 (174)
T 3ulx_A          170 N  170 (174)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=3.3e-53  Score=381.43  Aligned_cols=153  Identities=54%  Similarity=1.045  Sum_probs=131.4

Q ss_pred             CCCCCCCCceecCChHHHHHHHHHHHHcCCCCCccceeeccCCCCCCCCccccccCCceeEEEEeecCCcCCCCCCCccc
Q 046996           20 EHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRV   99 (364)
Q Consensus        20 ~~~~LPPGfRF~PTDEELV~~YLr~Ki~G~plp~~~I~evDVY~~ePwdLP~~~~~Ge~eWYFFspr~rK~~nG~R~~R~   99 (364)
                      ....|||||||+|||||||.+||++|+.|.+++.++|+++|||.+|||+||+....++++||||+++++|+++|.|++|+
T Consensus        13 ~~~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~   92 (171)
T 1ut7_A           13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV   92 (171)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEE
T ss_pred             cccCCCCcceeCCChHHHHHHHHHHHhcCCCCCCCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCccccc
Confidence            34679999999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             cccceEeecCCCceEecCCCceEEEEEEEEeecCCCCCCCCcCeEEEEEecCCCCcc--cccCCcEEEEEEEecCC
Q 046996          100 TTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHETE--RYQKAEISLCRVYKRPG  173 (364)
Q Consensus       100 tggG~WK~tG~~k~I~~~~G~vVG~KKtL~Fy~Gk~pkg~kTgWvMhEY~L~~~~~~--~~~~~e~VLCRIykK~~  173 (364)
                      +++||||++|+++.|... +.+||+||+|+||.|+++++.||+|+||||+|......  ....++|||||||+|++
T Consensus        93 t~~G~Wk~tG~~k~I~~~-~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCrv~~k~~  167 (171)
T 1ut7_A           93 AGSGYWKATGTDKIISTE-GQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQS  167 (171)
T ss_dssp             ETTEEEEEEEEEEEEEET-TEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC-
T ss_pred             CCCCEEeccCCCceEEec-CcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCccccCcccCCCEEEEEEEEcCC
Confidence            999999999999999974 69999999999999999999999999999999875421  13467999999999854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	364
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-63

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  198 bits (504), Expect = 1e-63
 Identities = 84/148 (56%), Positives = 108/148 (72%), Gaps = 3/148 (2%)

Query: 26  PGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVP 85
           PGFRF+PT+EEL+  YL RK  G  F+++LI  +DLY++DPW LP  A  GEKEW+F+ P
Sbjct: 19  PGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSP 78

Query: 86  RDRKYRNGDRPNRVTTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIM 145
           RDRKY NG RPNRV  SGYWKATG D++I +E  R +G+KK LVFY GKAPKG +T+WIM
Sbjct: 79  RDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQR-VGIKKALVFYIGKAPKGTKTNWIM 137

Query: 146 NEYRLPQHETER--YQKAEISLCRVYKR 171
           +EYRL +        +  +  LCR+YK+
Sbjct: 138 HEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	364
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.4e-51  Score=362.19  Aligned_cols=152  Identities=54%  Similarity=1.043  Sum_probs=129.9

Q ss_pred             CCCCCCCCceecCChHHHHHHHHHHHHcCCCCCccceeeccCCCCCCCCccccccCCceeEEEEeecCCcCCCCCCCccc
Q 046996           20 EHDVVMPGFRFHPTEEELVEFYLRRKVEGKRFNVELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRV   99 (364)
Q Consensus        20 ~~~~LPPGfRF~PTDEELV~~YLr~Ki~G~plp~~~I~evDVY~~ePwdLP~~~~~Ge~eWYFFspr~rK~~nG~R~~R~   99 (364)
                      ..-.|||||||+|||||||.+||++|+.|.|++.++|+++|||.+|||+||+....++++||||+++.+++++|.|.+|+
T Consensus        13 ~~l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~   92 (166)
T d1ut7a_          13 TQLSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV   92 (166)
T ss_dssp             CSSCCCTTEEECCCHHHHHHHTHHHHHTTCCCSSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEE
T ss_pred             ccccCCCccccCCCcHHHHHHHHHHHHcCCCCCcccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCccccc
Confidence            34469999999999999999999999999999999999999999999999998878889999999999999999999999


Q ss_pred             cccceEeecCCCceEecCCCceEEEEEEEEeecCCCCCCCCcCeEEEEEecCCCCc--ccccCCcEEEEEEEecC
Q 046996          100 TTSGYWKATGADRMIKSENSRSIGLKKTLVFYSGKAPKGIRTSWIMNEYRLPQHET--ERYQKAEISLCRVYKRP  172 (364)
Q Consensus       100 tggG~WK~tG~~k~I~~~~G~vVG~KKtL~Fy~Gk~pkg~kTgWvMhEY~L~~~~~--~~~~~~e~VLCRIykK~  172 (364)
                      +++|+||++|+++.|.+ +|.+||+||+|+||.++.+++.+|+|+||||+|.+...  .....++|||||||+|+
T Consensus        93 ~g~G~Wk~~g~~~~i~~-~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_          93 AGSGYWKATGTDKIIST-EGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             ETTEEEEEEEEEEEEEE-TTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC--------CCEEEEEEEECC
T ss_pred             cCCCEecccCCCceEec-CCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCcccccCccccCCEEEEEEEecC
Confidence            99999999999999886 57899999999999999999999999999999987543  22345689999999983