Citrus Sinensis ID: 047133

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------14
Protein Sequence
LESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWAL
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHcccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHccHHHHHHccccccccccccHHHHHHHHHHHHccccEEEEcccccEEEEEEEEEcccccEEEcccccccccccccccEEEc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHcccccccccccccHHHHHHHHcccccccccHHHHHHHHHHHHHHccHHHHHHHccccccccEEcHHHHHHHHHHHHcccccEEEccccEEEEEEEEEcccccEEEcccccccccccccccEEEcc
Coil and Loop (DISEMBL)
LESNKSFAAEMnkfwpsltrdenenEQFWEREwkhhgrgqptlppeeYFRTAITLVKAANLEAafrgaginpdgdklnprkyTRAIntrygttplykclntsLLMEVTLCVDAKARNFvsciarpsslsscpgdiiwal
Flexible Loop (DISEMBL)
lesnksfaaemnkfwpsltrdeNENEQFWEREWkhhgrgqptlpPEEYFRTAITLVKAANLEAAfrgaginpdgdklnprKYTRAintrygttplYKCLNTSLLMEVTLCVDAKARNFVSCiarpsslsscpgdiiwal
Low Complexity Region (SEG)
LESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWAL
Disordered region (IsUnstruct)
***************************FWEREW************EEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIW**
Disordered Region (DISOPRED)
****KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPS***SCPGDIIWAL
Disordered Region (DISEMBL)
********AEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWAL
Disordered Region (DISPRO)
LESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWAL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWAL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	139	2.2.26 [Sep-21-2011]
P42813	230	Ribonuclease 1 OS=Arabido	no	no	0.827	0.5	0.358	7e-15
P83618	238	Ribonuclease-like storage	N/A	no	0.863	0.504	0.349	5e-13
P42815	222	Ribonuclease 3 OS=Arabido	no	no	0.841	0.527	0.303	4e-12
P80196	237	Intracellular ribonucleas	N/A	no	0.834	0.489	0.336	1e-11
P80022	230	Extracellular ribonucleas	N/A	no	0.841	0.508	0.284	3e-11
Q7M438	223	Ribonuclease DdI OS=Dicty	no	no	0.776	0.484	0.327	1e-09
O80322	228	Ribonuclease S-1 OS=Pyrus	N/A	no	0.913	0.557	0.314	4e-09
Q40966	228	Ribonuclease S-4 OS=Pyrus	N/A	no	0.928	0.565	0.297	8e-09
O80323	222	Ribonuclease S-3 OS=Pyrus	N/A	no	0.942	0.590	0.309	7e-08
Q9CQ01	259	Ribonuclease T2 OS=Mus mu	yes	no	0.935	0.501	0.228	9e-08

>sp|P42813|RNS1_ARATH Ribonuclease 1 OS=Arabidopsis thaliana GN=RNS1 PE=1 SV=1

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 11  MNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRGAG 69
           M K WP+L       E FWE EW+ HG   +  +   EYF+TA+ L +  NL  A   AG
Sbjct: 98  MKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAG 157

Query: 70  INPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIARP 125
           INPDG   +      +I    G TP  +C       S L +V LCVD      + C   P
Sbjct: 158 INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFP 217

May remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 2EC: 7EC: .EC: 1

>sp|P83618|RN28_PANGI Ribonuclease-like storage protein OS=Panax ginseng PE=1 SV=2

 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 6/126 (4%)

Query: 1   LESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAA 59
           + S   F AEM+  WPS      E+ QFWE EWK HGR  +  L   +YFRTA+   KA 
Sbjct: 83  VNSVSDFLAEMHLAWPS-HETNTEDIQFWEHEWKKHGRCSEALLKQTDYFRTALAFRKAF 141

Query: 60  NLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTP---LYKCLNTS-LLMEVTLCVDAKA 115
           ++       GI P+ D   P+    AI       P     K  N+  +L ++ +CV+ +A
Sbjct: 142 DIVGLLNQEGIYPNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCVNQQA 201

Query: 116 RNFVSC 121
             FV C
Sbjct: 202 TRFVDC 207

May act as a storage protein providing a nitrogen source. Seems to have no RNase activity although it has conserved the active site residues.

Panax ginseng (taxid: 4054)

>sp|P42815|RNS3_ARATH Ribonuclease 3 OS=Arabidopsis thaliana GN=RNS3 PE=2 SV=1

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 5/122 (4%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           +++ + WP+L+   N+  +FW  EW+ HG   +  L   +YF   + L + ANL  A   
Sbjct: 88  SDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLLHALTN 147

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIA 123
           AGI PD      +     I    G  P  +C     + S L ++ LCVD  A  F++C  
Sbjct: 148 AGIKPDDKFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTSASKFINCPV 207

Query: 124 RP 125
            P
Sbjct: 208 MP 209

May remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|P80196|RNLX_SOLLC Intracellular ribonuclease LX OS=Solanum lycopersicum GN=RNALX PE=1 SV=2

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 54/122 (44%), Gaps = 6/122 (4%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGA 68
           + M K WPSL    ++  +FW  EW  HG     L    YF+TA+     +NL      A
Sbjct: 94  STMEKNWPSLACPSSDGLKFWSHEWLKHGTCS-ALNQHAYFQTALDFKTKSNLLQNLNNA 152

Query: 69  GINP-DGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIA 123
           GI P +GD        +AI    G TP  +C         L +V LCVD+ A  F+ C  
Sbjct: 153 GIKPRNGDYYGVESIKKAIEKGVGHTPFIECNVDSQGNHQLYQVYLCVDSSASKFIDCPI 212

Query: 124 RP 125
            P
Sbjct: 213 FP 214

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|P80022|RNLE_SOLLC Extracellular ribonuclease LE OS=Solanum lycopersicum PE=1 SV=2

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 6/123 (4%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEE--YFRTAITLVKAANLEAAFR 66
           + M + WP+L         FW  EW+ HG    ++   +  YF+ A+ L    +L +  +
Sbjct: 95  SSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQ 154

Query: 67  GAGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCI 122
           GA I+PDG+  +      AI +  G TP  +C       S L +V +CVD    + + C 
Sbjct: 155 GADIHPDGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECP 214

Query: 123 ARP 125
             P
Sbjct: 215 IFP 217

Probably involved in plant phosphate-starvation rescue system.

Solanum lycopersicum (taxid: 4081)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q7M438|RNDI_DICDI Ribonuclease DdI OS=Dictyostelium discoideum GN=ddiA PE=1 SV=3

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 8/116 (6%)

Query: 10  EMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLP---PEEYFRTAITLVKAANLEAAFR 66
           ++N  WPSLT     N  FW  E+  HG    T P     +YF T I L    N+ AA  
Sbjct: 94  QLNFDWPSLT---GPNTDFWTHEFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALE 150

Query: 67  GAGINP-DGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSC 121
              I P D +   P   T AI T +G  P  +C ++  L  V +C+D  + + + C
Sbjct: 151 SENIYPSDSNTYKPVDITNAITTHFGGKPGIQC-SSGQLSTVAVCIDKNSLSIMDC 205

Releases mononucleotides from RNA in the order of 3'-GMP > 3'-UMP > 3'-AMP > 3'-CMP.

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|O80322|RNS1_PYRPY Ribonuclease S-1 OS=Pyrus pyrifolia PE=1 SV=1

 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 16/143 (11%)

Query: 6   SFAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPE-EYFRTAITL--VKAANL 61
           +  A++   WP++  + +++  FWE+EW  HG  G PT+  +  Y +T I +   +  N+
Sbjct: 87  NMTAQLEIIWPNVL-NRSDHVGFWEKEWIKHGTCGYPTIKDDMHYLQTVIRMYITQKQNV 145

Query: 62  EAAFRGAGINPDGDKLNPRKYTRAINTRYGTT---PLYKCL----NTSLLMEVTLCVDAK 114
            A    A I P+G          AI  R GT    P +KC      T+ L+EVTLC D  
Sbjct: 146 SAILSKAAIQPNGTNRPLVDIENAI--RRGTNNTKPKFKCQKNTRTTTELVEVTLCSDRD 203

Query: 115 ARNFVSCIARPSSLS--SCPGDI 135
            + F++C   P   S  SCP  +
Sbjct: 204 LKKFINCPHGPPQGSRFSCPSSV 226

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species, self-incompatibility is controlled by the single, multiallelic locus S.

Pyrus pyrifolia (taxid: 3767)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q40966|RNS4_PYRPY Ribonuclease S-4 OS=Pyrus pyrifolia PE=1 SV=2

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 12/141 (8%)

Query: 6   SFAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPE-EYFRTAITL--VKAANL 61
           +  A++   WP++  + +++  FWEREW  HG  G PT+  +  Y +T I +   +  N+
Sbjct: 87  NMTAQLEIIWPNVL-NRSDHVGFWEREWLKHGTCGYPTIKDDMHYLKTVIKMYITQKQNV 145

Query: 62  EAAFRGAGINPDGDKLNPRKYTRAINT-RYGTTPLYKCL----NTSLLMEVTLCVDAKAR 116
            A    A I P+G+  +      AI +    T P +KC      T+ L+EVTLC +    
Sbjct: 146 SAILSKATIQPNGNNRSLVDIENAIRSGNNNTKPKFKCQKNTRTTTELVEVTLCSNRDLT 205

Query: 117 NFVSCIARPSSLSS--CPGDI 135
            F++C   P   S   CP ++
Sbjct: 206 KFINCPHGPPKGSRYFCPANV 226

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species, self-incompatibility is controlled by the single, multiallelic locus S.

Pyrus pyrifolia (taxid: 3767)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|O80323|RNS3_PYRPY Ribonuclease S-3 OS=Pyrus pyrifolia PE=1 SV=1

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 11/142 (7%)

Query: 5   KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPE-EYFRTAITLV--KAAN 60
           K    ++   WP++  D  +N  FW++EW  HG  G PT+  E  YF T I +   K  N
Sbjct: 80  KLLEHQLEIIWPNVF-DRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQN 138

Query: 61  LEAAFRGAGINPDGDKLNPRKYTRAI----NTRYGTTPLYKCLNTSLLMEVTLCVDAKAR 116
           +      A I PDG K        AI    + +       K   T+ L+E+TLC D    
Sbjct: 139 VSRILSKAKIEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGE 198

Query: 117 NFVSCIA--RPSSLSSCPGDII 136
           +F+ C     P S   CP + I
Sbjct: 199 HFIDCPHPFEPISPHYCPTNNI 220

Self-incompatibility (SI) is the inherited ability of a flowering plant to prevent self-fertilization by discriminating between self and non-self pollen during pollination. In many species, self-incompatibility is controlled by the single, multiallelic locus S.

Pyrus pyrifolia (taxid: 3767)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: 1

>sp|Q9CQ01|RNT2_MOUSE Ribonuclease T2 OS=Mus musculus GN=Rnaset2 PE=2 SV=1

 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 10/140 (7%)

Query: 1   LESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPP----EEYFRTAITLV 56
           L+  K    +M  +WP +    +   QFW+ EW  HG     +      ++YF  ++ L 
Sbjct: 87  LDEIKDLLRDMKIYWPDVIHRSSNRSQFWKHEWVKHGTCAAQVDALNSEKKYFGKSLDLY 146

Query: 57  KAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCL------NTSLLMEVTLC 110
           K  +L +  +  GI P  +      +  A+   YG  P  +CL      +   + ++ LC
Sbjct: 147 KQIDLNSVLQKFGIKPSINYYQLADFKDALTRIYGVVPKIQCLMPEQGESVQTVGQIELC 206

Query: 111 VDAKARNFVSCIARPSSLSS 130
              +  +  +C      LSS
Sbjct: 207 FTKEDLHLRNCTEPGEQLSS 226

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 2

EC: 7

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
449478669	240	PREDICTED: LOW QUALITY PROTEIN: extracel	0.863	0.5	0.368	2e-14
449435342	240	PREDICTED: extracellular ribonuclease LE	0.863	0.5	0.368	2e-14
18394085	228	ribonuclease T2 [Arabidopsis thaliana] g	0.913	0.557	0.343	7e-14
224098878	227	predicted protein [Populus trichocarpa]	0.899	0.550	0.356	9e-14
116831077	231	unknown [Arabidopsis thaliana]	0.827	0.497	0.358	5e-13
15227068	230	ribonuclease 1 [Arabidopsis thaliana] gi	0.827	0.5	0.358	5e-13
21555182	230	ribonuclease, RNS1 [Arabidopsis thaliana	0.827	0.5	0.358	5e-13
297814600	230	ribonuclease, RNS1 [Arabidopsis lyrata s	0.827	0.5	0.358	6e-13
351727689	227	uncharacterized protein LOC100305644 pre	0.856	0.524	0.362	6e-13
357487003	228	Ribonuclease T2 [Medicago truncatula] gi	0.841	0.513	0.327	1e-12

>gi|449478669|ref|XP_004155386.1| PREDICTED: LOW QUALITY PROTEIN: extracellular ribonuclease LE-like [Cucumis sativus]

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 8   AAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFR 66
            + M K WPSL    ++N +FW  EW  HG   +  L   +YF T + L + AN+  A +
Sbjct: 105 VSSMEKNWPSLACPSSDNTKFWSHEWNKHGTCSESVLDQXQYFETTLNLKQQANILQALQ 164

Query: 67  GAGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCI 122
            AGINPDG   +  K   AI      +P   C       S L E+ LCVD+ A NF+ C 
Sbjct: 165 TAGINPDGSYYSLDKIKSAIEEGIKLSPGISCNVDESGNSQLYEIYLCVDSSASNFIDCP 224

Query: 123 ARPSS 127
             P+S
Sbjct: 225 IFPNS 229

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449435342|ref|XP_004135454.1| PREDICTED: extracellular ribonuclease LE-like [Cucumis sativus]

 Score = 84.0 bits (206), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 61/125 (48%), Gaps = 5/125 (4%)

Query: 8   AAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFR 66
            + M K WPSL    ++N +FW  EW  HG   +  L    YF T + L + AN+  A +
Sbjct: 105 VSSMEKNWPSLACPSSDNTKFWSHEWNKHGTCSESVLDQHSYFETTLNLKQQANILQALQ 164

Query: 67  GAGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCI 122
            AGINPDG   +  K   AI      +P   C       S L E+ LCVD+ A NF+ C 
Sbjct: 165 TAGINPDGSYYSLDKIKSAIEEGIKLSPGISCNVDESGNSQLYEIYLCVDSSASNFIDCP 224

Query: 123 ARPSS 127
             P+S
Sbjct: 225 IFPNS 229

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18394085|ref|NP_563941.1| ribonuclease T2 [Arabidopsis thaliana] gi|5080798|gb|AAD39308.1|AC007576_31 Very similar to ribonucleases [Arabidopsis thaliana] gi|332191003|gb|AEE29124.1| ribonuclease T2 [Arabidopsis thaliana]

 Score = 82.0 bits (201), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 63/134 (47%), Gaps = 7/134 (5%)

Query: 7   FAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAF 65
             + + K WP+L+   NE   FWE EW+ HG   +  +   EYF  A+ L + ANL    
Sbjct: 92  LVSSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENALKLKQKANLLQIL 151

Query: 66  RGAGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSC 121
           + +GINPD    N  K T AI    G TP  +C       + L ++ +CVD     F+ C
Sbjct: 152 KNSGINPDDGFYNLDKITNAIKDGIGFTPGIECNKDPERNAQLHQIYICVDTSGTEFIEC 211

Query: 122 IARPSSLSSCPGDI 135
              P    SCP  I
Sbjct: 212 PVLPR--GSCPSQI 223

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224098878|ref|XP_002311302.1| predicted protein [Populus trichocarpa] gi|222851122|gb|EEE88669.1| predicted protein [Populus trichocarpa]

 Score = 81.6 bits (200), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 47/132 (35%), Positives = 60/132 (45%), Gaps = 7/132 (5%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           + M K WP+L         FW  EW+ HG   +  L    YF+ A++L K ANL  A   
Sbjct: 93  SSMQKNWPTLACPSGNGVSFWTHEWEKHGTCSESVLDQHGYFQAALSLQKQANLLQALAS 152

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIA 123
           AGINPDG   +     RAI    G TP  +C       S L ++ LCVD   +N + C  
Sbjct: 153 AGINPDGGSYSMSNIKRAIQEAVGFTPWIECNTDASGNSQLYQIYLCVDTTGKNLIECPV 212

Query: 124 RPSSLSSCPGDI 135
            P     C  DI
Sbjct: 213 FPK--GKCGSDI 222

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831077|gb|ABK28493.1| unknown [Arabidopsis thaliana]

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 11  MNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRGAG 69
           M K WP+L       E FWE EW+ HG   +  +   EYF+TA+ L +  NL  A   AG
Sbjct: 98  MKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAG 157

Query: 70  INPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIARP 125
           INPDG   +      +I    G TP  +C       S L +V LCVD      + C   P
Sbjct: 158 INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFP 217

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227068|ref|NP_178399.1| ribonuclease 1 [Arabidopsis thaliana] gi|1173103|sp|P42813.1|RNS1_ARATH RecName: Full=Ribonuclease 1; Flags: Precursor gi|561998|gb|AAC48925.1| ribonuclease [Arabidopsis thaliana] gi|3461823|gb|AAC32917.1| ribonuclease, RNS1 [Arabidopsis thaliana] gi|18252957|gb|AAL62405.1| ribonuclease, RNS1 [Arabidopsis thaliana] gi|21389661|gb|AAM48029.1| ribonuclease RNS1 [Arabidopsis thaliana] gi|91806172|gb|ABE65814.1| ribonuclease 1 [Arabidopsis thaliana] gi|330250558|gb|AEC05652.1| ribonuclease 1 [Arabidopsis thaliana]

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 11  MNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRGAG 69
           M K WP+L       E FWE EW+ HG   +  +   EYF+TA+ L +  NL  A   AG
Sbjct: 98  MKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAG 157

Query: 70  INPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIARP 125
           INPDG   +      +I    G TP  +C       S L +V LCVD      + C   P
Sbjct: 158 INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFP 217

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21555182|gb|AAM63798.1| ribonuclease, RNS1 [Arabidopsis thaliana]

 Score = 79.3 bits (194), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 11  MNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRGAG 69
           M K WP+L       E FWE EW+ HG   +  +   EYF+TA+ L +  NL  A   AG
Sbjct: 98  MKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAG 157

Query: 70  INPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIARP 125
           INPDG   +      +I    G TP  +C       S L +V LCVD      + C   P
Sbjct: 158 INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFP 217

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297814600|ref|XP_002875183.1| ribonuclease, RNS1 [Arabidopsis lyrata subsp. lyrata] gi|297321021|gb|EFH51442.1| ribonuclease, RNS1 [Arabidopsis lyrata subsp. lyrata]

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 55/120 (45%), Gaps = 5/120 (4%)

Query: 11  MNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRGAG 69
           M K WP+L       E FWE EW+ HG   +  +   EYF+TA+ L +  NL  A   AG
Sbjct: 98  MKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALKLKQKTNLLGALTKAG 157

Query: 70  INPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIARP 125
           INPDG   +      +I    G TP  +C       S L +V LCVD      + C   P
Sbjct: 158 INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIQCPVFP 217

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351727689|ref|NP_001238449.1| uncharacterized protein LOC100305644 precursor [Glycine max] gi|255626171|gb|ACU13430.1| unknown [Glycine max]

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 5/124 (4%)

Query: 7   FAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAF 65
             + + + WP+L        QFW  EW+ HG   Q  L   +YF TA+ L + ANL  A 
Sbjct: 91  LTSSLQRNWPTLACPSGNGVQFWTHEWEKHGTCSQSVLKQHDYFETALDLKQRANLLQAL 150

Query: 66  RGAGINPDGDKLNPRKYTRAINTRYGTTPLYKC-LNTS---LLMEVTLCVDAKARNFVSC 121
             AGI PDG   +      AI    G TP  +C ++TS    L +V LCVD    NF+ C
Sbjct: 151 TNAGIQPDGGFYSLSSIKGAIKNAIGYTPYIECNVDTSRNNQLYQVYLCVDTSGSNFIEC 210

Query: 122 IARP 125
              P
Sbjct: 211 PVFP 214

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357487003|ref|XP_003613789.1| Ribonuclease T2 [Medicago truncatula] gi|355515124|gb|AES96747.1| Ribonuclease T2 [Medicago truncatula]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           + + + WP+L     +  QFW  EW+ HG   +  L   +YF T + L + ANL  A   
Sbjct: 94  SNLQQNWPTLACPSGDGIQFWTHEWEKHGTCSESVLKQHDYFETTLNLRQKANLLQALTS 153

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIA 123
           AG+ PDG+  +      AI    G  P  +C       S L +V LCVD    NF+ C  
Sbjct: 154 AGVQPDGNSYSLSSIKGAIQNAVGFAPFIECNVDSSGNSQLYQVYLCVDTSGSNFIDCPV 213

Query: 124 RP 125
            P
Sbjct: 214 FP 215

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	139
TAIR|locus:2035871	228	AT1G14220 [Arabidopsis thalian	0.899	0.548	0.348	5.3e-17
TAIR|locus:2056755	230	RNS1 "ribonuclease 1" [Arabido	0.884	0.534	0.346	9.8e-16
UNIPROTKB|P83618	238	P83618 "Ribonuclease-like stor	0.863	0.504	0.349	1.1e-14
TAIR|locus:2200665	222	RNS3 "ribonuclease 3" [Arabido	0.834	0.522	0.325	3.4e-13
UNIPROTKB|Q940D3	252	Q940D3 "RNase S-like protein"	0.928	0.511	0.279	3.9e-12
DICTYBASE|DDB_G0295845	236	DDB_G0295845 "ribonuclease T2"	0.870	0.512	0.303	1.7e-11
DICTYBASE|DDB_G0281293	223	ddiA "ribonuclease T2" [Dictyo	0.856	0.533	0.320	7.4e-11
UNIPROTKB|F1P285	201	RNASET2 "Uncharacterized prote	0.899	0.621	0.270	1.5e-10
UNIPROTKB|E1C5F2	266	RNASET2 "Uncharacterized prote	0.683	0.357	0.292	1.4e-09
UNIPROTKB|Q0III8	291	RNASET2 "Uncharacterized prote	0.877	0.419	0.301	3.3e-08

TAIR|locus:2035871 AT1G14220 [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 46/132 (34%), Positives = 63/132 (47%)

Query:     9 AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
             + + K WP+L+   NE   FWE EW+ HG   +  +   EYF  A+ L + ANL    + 
Sbjct:    94 SSLKKNWPTLSCPSNEGFNFWEHEWEKHGTCSESVMDQHEYFENALKLKQKANLLQILKN 153

Query:    68 AGINPDGDKLNPRKYTRAINTRYGTTPLYKCLN----TSLLMEVTLCVDAKARNFVSCIA 123
             +GINPD    N  K T AI    G TP  +C       + L ++ +CVD     F+ C  
Sbjct:   154 SGINPDDGFYNLDKITNAIKDGIGFTPGIECNKDPERNAQLHQIYICVDTSGTEFIECPV 213

Query:   124 RPSSLSSCPGDI 135
              P    SCP  I
Sbjct:   214 LPRG--SCPSQI 223

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0033897 "ribonuclease T2 activity" evidence=IEA

TAIR|locus:2056755 RNS1 "ribonuclease 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 45/130 (34%), Positives = 58/130 (44%)

Query:    11 MNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRGAG 69
             M K WP+L       E FWE EW+ HG   +  +   EYF+TA+ L +  NL  A   AG
Sbjct:    98 MKKSWPTLACPSGSGEAFWEHEWEKHGTCSESVIDQHEYFQTALNLKQKTNLLGALTKAG 157

Query:    70 INPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIARP 125
             INPDG   +      +I    G TP  +C       S L +V LCVD      + C   P
Sbjct:   158 INPDGKSYSLESIRDSIKESIGFTPWVECNRDGSGNSQLYQVYLCVDRSGSGLIECPVFP 217

Query:   126 SSLSSCPGDI 135
                  C  +I
Sbjct:   218 HG--KCGAEI 225

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0009611 "response to wounding" evidence=IEP

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IEP

GO:0005618 "cell wall" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

GO:0004540 "ribonuclease activity" evidence=IDA

GO:0007568 "aging" evidence=IEP

GO:0016036 "cellular response to phosphate starvation" evidence=IEP

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=IMP

UNIPROTKB|P83618 P83618 "Ribonuclease-like storage protein" [Panax ginseng (taxid:4054)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 44/126 (34%), Positives = 61/126 (48%)

Query:     1 LESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAA 59
             + S   F AEM+  WPS      E+ QFWE EWK HGR  +  L   +YFRTA+   KA 
Sbjct:    83 VNSVSDFLAEMHLAWPS-HETNTEDIQFWEHEWKKHGRCSEALLKQTDYFRTALAFRKAF 141

Query:    60 NLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTP---LYKCLNTS-LLMEVTLCVDAKA 115
             ++       GI P+ D   P+    AI       P     K  N+  +L ++ +CV+ +A
Sbjct:   142 DIVGLLNQEGIYPNNDLYRPKMIKEAIKKHLNAVPEIDFTKNENSEYVLTDINVCVNQQA 201

Query:   116 RNFVSC 121
               FV C
Sbjct:   202 TRFVDC 207

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2200665 RNS3 "ribonuclease 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 173 (66.0 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 40/123 (32%), Positives = 59/123 (47%)

Query:     9 AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
             +++ + WP+L+   N+  +FW  EW+ HG   +  L   +YF   + L + ANL  A   
Sbjct:    88 SDLQREWPTLSCPSNDGMKFWTHEWEKHGTCAESELDQHDYFEAGLKLKQKANLLHALTN 147

Query:    68 AGINPDGDKLNPRK-YTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCI 122
             AGI PD DK    K     I    G  P  +C     + S L ++ LCVD  A  F++C 
Sbjct:   148 AGIKPD-DKFYEMKDIENTIKQVVGFAPGIECNKDSSHNSQLYQIYLCVDTSASKFINCP 206

Query:   123 ARP 125
               P
Sbjct:   207 VMP 209

GO:0003723 "RNA binding" evidence=IEA

GO:0004521 "endoribonuclease activity" evidence=ISS

GO:0005576 "extracellular region" evidence=ISM

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0007568 "aging" evidence=IEP

UNIPROTKB|Q940D3 Q940D3 "RNase S-like protein" [Oryza sativa (taxid:4530)]

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 38/136 (27%), Positives = 63/136 (46%)

Query:     6 SFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAF 65
             S    +N +W ++     +    W+ EW  +G     L   +YF+  + L K A++ +A 
Sbjct:    95 SIENNLNHYWSNIKCPRTDGVNSWKSEWNSYGVCSG-LKELDYFKAGLQLRKNADVLSAL 153

Query:    66 RGAGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSC 121
                GI PD    N      A+N + G TP  +C         L E+ LCVD  A++F+ C
Sbjct:   154 AEQGIKPDYQLYNTAFIKWAVNQKLGVTPGVQCRDGPFGKKQLYEIYLCVDKDAKSFIDC 213

Query:   122 IARPSSLSSCPGDIIW 137
                P+   SCP ++++
Sbjct:   214 PVLPNL--SCPAEVLF 227

GO:0003723 "RNA binding" evidence=ISS

DICTYBASE|DDB_G0295845 DDB_G0295845 "ribonuclease T2" [Dictyostelium discoideum (taxid:44689)]

 Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
 Identities = 40/132 (30%), Positives = 59/132 (44%)

Query:    10 EMNKFWPSLTRDENENEQFWEREWKHHGR-----GQPTLPPEEYFRTAITLVKAANLEAA 64
             ++N  W SLT D   N+ FW  E+K HG      G P     +YF   + L    NL +A
Sbjct:   101 QLNVDWISLTED---NDLFWTSEYKKHGTCAVVAGSPISNEHDYFVAGLKLYTQHNLTSA 157

Query:    65 FRGAGINP-DGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIA 123
                  I P D D       + AIN+++G  P+ +C N  L   + LC+D K  + + C  
Sbjct:   158 LISENIYPSDQDTYESDSISSAINSQFGGQPVMQCDNNKL-STIALCIDKKTLSIMDC-P 215

Query:   124 RPSSLSSCPGDI 135
                   +C G +
Sbjct:   216 EVDGFDTCSGKV 227

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

DICTYBASE|DDB_G0281293 ddiA "ribonuclease T2" [Dictyostelium discoideum (taxid:44689)]

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 42/131 (32%), Positives = 58/131 (44%)

Query:    10 EMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPP---EEYFRTAITLVKAANLEAAFR 66
             ++N  WPSLT     N  FW  E+  HG    T P     +YF T I L    N+ AA  
Sbjct:    94 QLNFDWPSLT---GPNTDFWTHEFSKHGTCSITGPITDIHDYFATGIKLYTEFNITAALE 150

Query:    67 GAGINP-DGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARP 125
                I P D +   P   T AI T +G  P  +C ++  L  V +C+D  + + + C   P
Sbjct:   151 SENIYPSDSNTYKPVDITNAITTHFGGKPGIQC-SSGQLSTVAVCIDKNSLSIMDC---P 206

Query:   126 SSLS-SCPGDI 135
                  SC G +
Sbjct:   207 DLQGWSCSGSV 217

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

GO:0090305 "nucleic acid phosphodiester bond hydrolysis" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0004519 "endonuclease activity" evidence=IEA

GO:0004518 "nuclease activity" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1P285 RNASET2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 37/137 (27%), Positives = 53/137 (38%)

Query:     5 KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLP----PEEYFRTAITLVKAAN 60
             K   ++M ++WP +        QFW+ EW+ HG    TLP     ++YF   + L +  N
Sbjct:    54 KDLMSDMRRYWPDVIHSSLNRTQFWKHEWEKHGTCAATLPILDSQKKYFSKTLELYQLVN 113

Query:    61 LEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCL------NTSLLMEVTLCVDAK 114
             L      AGI P             +   YG TP  +CL          L ++  C   K
Sbjct:   114 LNGFLLKAGIKPGSTYYQMAAIKEVLTEFYGITPKIQCLPPEEGEEAQTLGQIEFCF-TK 172

Query:   115 ARNFVSCIARPSSLSSC 131
                  +C   P  LS C
Sbjct:   173 ELELRNC-TEPKELSVC 188

GO:0003723 "RNA binding" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

UNIPROTKB|E1C5F2 RNASET2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 142 (55.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 29/99 (29%), Positives = 42/99 (42%)

Query:     5 KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLP----PEEYFRTAITLVKAAN 60
             K   ++M ++WP +        QFW+ EW+ HG    TLP     ++YF   + L +  N
Sbjct:    90 KDLMSDMRRYWPDVIHSSLNRTQFWKHEWEKHGTCAATLPILDSQKKYFSKTLELYQLVN 149

Query:    61 LEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCL 99
             L      AGI P             +   YG TP  +CL
Sbjct:   150 LNGFLLKAGIKPGSTYYQMAAIKEVLTEFYGITPKIQCL 188

GO:0003723 "RNA binding" evidence=IEA

GO:0033897 "ribonuclease T2 activity" evidence=IEA

UNIPROTKB|Q0III8 RNASET2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 131 (51.2 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 41/136 (30%), Positives = 56/136 (41%)

Query:     5 KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPP----EEYFRTAITLVKAAN 60
             K    +M  +WP L    N + QFW  EWK HG     L       +YF  ++ L KA  
Sbjct:   128 KDLLPDMKMYWPDLLHPSNSSLQFWSHEWKKHGTCAAQLDALNSQRKYFGKSLDLYKALA 187

Query:    61 LEAAFRGAGINPDGDKLNPRKYTR-AINTRYGTTPLYKCL------NTSLLMEVTLCV-- 111
             L +  +  GI P  D        R A+ T Y   P  +C          LL +V LC   
Sbjct:   188 LTSMLQKLGIEPSTDHYYQVSDIRDALVTVYKVVPKVQCFLLEKGQEVQLLGQVELCFSK 247

Query:   112 DAKARNFVSCIARPSS 127
             D + +N  S  A P++
Sbjct:   248 DLQLQN-CSHAAEPAA 262

GO:0033897 "ribonuclease T2 activity" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.27.1	LOW CONFIDENCE prediction!
3rd Layer	3.1.27	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	139
cd01061	195	cd01061, RNase_T2_euk, Ribonuclease T2 (RNase T2)	8e-25
cd00374	195	cd00374, RNase_T2, Ribonuclease T2 (RNase T2) is a	5e-23
pfam00445	182	pfam00445, Ribonuclease_T2, Ribonuclease T2 family	9e-22
cd01062	184	cd01062, RNase_T2_prok, Ribonuclease T2 (RNase T2)	1e-04

>gnl|CDD|238512 cd01061, RNase_T2_euk, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score = 93.6 bits (233), Expect = 8e-25
 Identities = 44/133 (33%), Positives = 55/133 (41%), Gaps = 8/133 (6%)

Query: 10  EMNKFWPSLTRDENENEQFWEREWKHHGR--GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           E+NK+WP LT     N+ FWE EW  HG           +YF TA+ L    +L      
Sbjct: 65  ELNKYWPDLTGP-KNNQSFWEHEWNKHGTCSSTLLYNQYDYFDTALKLKDKLDLLKILAK 123

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKCL---NTSLLMEVTLCVDAKARNFVSCIAR 124
           AGI P            AI    G TP+ KC        L E+ +C D K   F+ C   
Sbjct: 124 AGIVPSTQTYTLSDIQNAIKAATGVTPVIKCSKDPGKGELNEIWICFDKKGGEFIDC--P 181

Query: 125 PSSLSSCPGDIIW 137
               S+CP D I 
Sbjct: 182 RPPKSTCPDDGIK 194

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the eukaryotic RNase T2 family members. Length = 195

>gnl|CDD|238220 cd00374, RNase_T2, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score = 88.7 bits (220), Expect = 5e-23
 Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 17/138 (12%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
            E+NK+WP L   ++ +  FW+ EW  HG      L  ++YFRTA+ L+   +L +    
Sbjct: 65  DELNKYWPDLMPGKDSS--FWKHEWNKHGTCSGTLLDQDDYFRTALKLLDKLDLLSILAK 122

Query: 68  AGINPDGDKLNPRKYT-----RAINTRYGTTPLYKCL---NTSLLMEVTLCVDAKARNFV 119
           AGI P         YT      AI    G TP  KC       LL E+ +C D  A  F+
Sbjct: 123 AGIKPSDGS----TYTLAFIQNAIKAATGATPSLKCTKDPGKGLLTEIWICFDKDALKFI 178

Query: 120 SCIARPSSLSSCPGDIIW 137
            C       S+CP D I 
Sbjct: 179 DC--PTPGKSTCPADGIK 194

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Length = 195

>gnl|CDD|215923 pfam00445, Ribonuclease_T2, Ribonuclease T2 family

 Score = 85.2 bits (211), Expect = 9e-22
 Identities = 34/124 (27%), Positives = 50/124 (40%), Gaps = 10/124 (8%)

Query: 5   KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEA 63
                ++  +WPSLT +   ++  W+ EW+ HG      L  ++YF  A+ L    NL  
Sbjct: 60  SDLLDKLLTYWPSLTGN---SQSLWKHEWEKHGTCALSGLSQDDYFSKALKLKDKLNLLD 116

Query: 64  AFRGAGINP-DGDKLNPRKYTRAINTRYGTTPLYKC-----LNTSLLMEVTLCVDAKARN 117
               AGI P DG      +   A+    G  P  KC          L EV +C+D     
Sbjct: 117 ILASAGIKPSDGKTYTLSEIENALKKATGKAPTLKCTRGDKNGIQYLTEVRICLDKDLFI 176

Query: 118 FVSC 121
            + C
Sbjct: 177 PIDC 180

Length = 182

>gnl|CDD|238513 cd01062, RNase_T2_prok, Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

 Score = 39.7 bits (93), Expect = 1e-04
 Identities = 25/111 (22%), Positives = 39/111 (35%), Gaps = 12/111 (10%)

Query: 32  EWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYG 91
           EW+ HG     L P+ YF  A  L +A  +    R          +   +  +A      
Sbjct: 82  EWRKHGTCSG-LDPDAYFAKARNLREALKIPPELRLL---AGNIGVTASEIRQAFIKANP 137

Query: 92  TTP----LYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWA 138
             P       C    LL EV +C+D   + F +C    +   +CP   +  
Sbjct: 138 GLPPDAVSVSC-QGGLLTEVRICLDKDLK-FAAC--PTADRDNCPAGTVDI 184

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the prokaryotic RNase T2 family members. Length = 184

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	139
cd01061	195	RNase_T2_euk Ribonuclease T2 (RNase T2) is a wides	100.0
KOG1642	263	consensus Ribonuclease, T2 family [RNA processing	100.0
cd00374	195	RNase_T2 Ribonuclease T2 (RNase T2) is a widesprea	100.0
PF00445	189	Ribonuclease_T2: Ribonuclease T2 family; InterPro:	100.0
cd01062	184	RNase_T2_prok Ribonuclease T2 (RNase T2) is a wide	99.96
PRK10095	268	ribonuclease I; Provisional	99.88
COG3719	249	Rna Ribonuclease I [Translation, ribosomal structu	99.84

>cd01061 RNase_T2_euk Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=100.00  E-value=6.2e-37  Score=230.75  Aligned_cols=130  Identities=34%  Similarity=0.658  Sum_probs=114.4

Q ss_pred             chhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCC--CChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCHHH
Q 047133            4 NKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPT--LPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRK   81 (139)
Q Consensus         4 ~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~--~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~~~   81 (139)
                      +++|+++|+.+||++.. ..++..||+|||+|||||...  .++.+||.+|++|++++|+..+|+++||+|++..|++++
T Consensus        59 ~~~l~~~L~~~Wp~l~~-~~~~~~fw~hEW~KHGTC~~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~~I~P~~~~~~~~~  137 (195)
T cd01061          59 ISDLLNELNKYWPDLTG-PKNNQSFWEHEWNKHGTCSSTLLYNQYDYFDTALKLKDKLDLLKILAKAGIVPSTQTYTLSD  137 (195)
T ss_pred             chhhhHHHhccCCCCcC-CCCcchHHHHHHhhCcEeCCCcccCHHHHHHHHHHHHHHCCHHHHHHHCCcCCCCcEEcHHH
Confidence            56899999999999953 235789999999999997653  699999999999999999999999999999658899999


Q ss_pred             HHHHHHH-hCCCCcEEEeccC---CcEEEEEEeeecCCCceeeCCCCCCCCCCCC-Cceee
Q 047133           82 YTRAINT-RYGTTPLYKCLNT---SLLMEVTLCVDAKARNFVSCIARPSSLSSCP-GDIIW  137 (139)
Q Consensus        82 i~~al~~-~g~~~p~l~C~~~---~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~-~~i~~  137 (139)
                      |++||++ +| .+|.|+|.+.   ++|.||++|+|+++.++++||...  ..+|| +.|+|
T Consensus       138 i~~ai~~~~g-~~~~l~C~~~~~~~~L~Ev~iC~~k~~~~~~~C~~~~--~~~C~~~~i~f  195 (195)
T cd01061         138 IQNAIKAATG-VTPVIKCSKDPGKGELNEIWICFDKKGGEFIDCPRPP--KSTCPDDGIKF  195 (195)
T ss_pred             HHHHHHHHHC-CCcEEEeCcCCCCcEEEEEEEEEECCCCeEeeCCCCC--CCCCCCCceEC
Confidence            9999999 98 8999999872   799999999999944899999854  46899 55776

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the eukaryotic RNase T2 family members.

>KOG1642 consensus Ribonuclease, T2 family [RNA processing and modification]

Probab=100.00  E-value=1.5e-36  Score=232.88  Aligned_cols=135  Identities=27%  Similarity=0.513  Sum_probs=114.8

Q ss_pred             CcchhHHHHHhccCCCCccCCC-C-ChhhHHHhhhcccc-cCCCC---ChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCC
Q 047133            2 ESNKSFAAEMNKFWPSLTRDEN-E-NEQFWEREWKHHGR-GQPTL---PPEEYFRTAITLVKAANLEAAFRGAGINPDGD   75 (139)
Q Consensus         2 ~~~~~l~~~L~~~Wp~l~~~~~-~-~~~fw~hEW~KHGt-~~~~~---~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~   75 (139)
                      ++|++|++.|.++||+|.++.. . ..+||+|||+|||| ++..+   +|.+||.++++|++++|+..+|.++||.|+++
T Consensus        90 ~~isdl~~~L~~~Wp~L~~~s~n~g~~~fW~HEweKHGTCa~sv~~~~dq~~YF~~~L~l~~k~~l~~~L~~~gI~p~~~  169 (263)
T KOG1642|consen   90 SKISDLEDSLEKEWPDLYCPSPNGGHESFWKHEWEKHGTCASSVFPLCDQHKYFETTLKLKQKLDLLSILKKAGIKPDDN  169 (263)
T ss_pred             HHccchhhhHHhhccccccCCCCCccchhhhhhhhccCchhhhhhhhhhHHHHHHHHHHHHHHHhHHHHHHHcCCCCCCC
Confidence            5789999999999999987663 3 28999999999999 45555   99999999999999999999999999999889


Q ss_pred             CCCHHHHHHHHHH-hCCCCcEEEecc-----CCcEEEEEEeeecCCCceeeCCC-C-CCCCCCCCCceeec
Q 047133           76 KLNPRKYTRAINT-RYGTTPLYKCLN-----TSLLMEVTLCVDAKARNFVSCIA-R-PSSLSSCPGDIIWA  138 (139)
Q Consensus        76 ~y~~~~i~~al~~-~g~~~p~l~C~~-----~~~L~Ev~~C~~~~~~~~i~Cp~-~-~~~~~~C~~~i~~p  138 (139)
                      .|++++|++||+. .| ..|.|.|.+     ..+|.||++|+.|+. .+++|.. + ......|+..+.||
T Consensus       170 ~y~l~~I~nAi~~~~G-~~p~I~C~rd~~~nv~~l~qI~lCl~kd~-~~~d~~~~~~~~P~g~~~~~~~~p  238 (263)
T KOG1642|consen  170 FYSLADIKNAIKEAIG-KTPGIECLRDSKHNVSQLGQIRLCLLKDF-SPRDCIECPTEFPRGSCPTFIQFP  238 (263)
T ss_pred             ceeHHHHHHHHHHHhC-CCCceEeccCcccCceEeeeEEEEeecCc-ccccccCCCCcccCCcccccccCC
Confidence            9999999999999 99 999999988     268999999998776 5566544 1 11234588777765

>cd00374 RNase_T2 Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=100.00  E-value=5.6e-35  Score=219.19  Aligned_cols=130  Identities=34%  Similarity=0.700  Sum_probs=113.7

Q ss_pred             cchhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCC-CCChHHHHHHHHHHHHhcCHHHHHHhCCCCC-CCCCCCHH
Q 047133            3 SNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQP-TLPPEEYFRTAITLVKAANLEAAFRGAGINP-DGDKLNPR   80 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~-~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P-~~~~y~~~   80 (139)
                      .+.+|.++|+++||++. +.. +..||+|||+|||||.. .+++.+||++|++|++++|++++|+.+||+| ++..|+.+
T Consensus        59 ~~~~l~~~l~~~w~~~~-~~~-~~~fw~hEW~KHGTC~~~~~~~~~YF~~a~~l~~~~ni~~~L~~~~i~p~~~~~~~~~  136 (195)
T cd00374          59 KDSDLLDELNKYWPDLM-PGK-DSSFWKHEWNKHGTCSGTLLDQDDYFRTALKLLDKLDLLSILAKAGIKPSDGSTYTLA  136 (195)
T ss_pred             ccHHHHHHHHhhCcccC-CCC-CchHHHHHHhcCceecCCcCCHHHHHHHHHHHHHhCCHHHHHHHCCCcCCCCceecHH
Confidence            45789999999999994 222 67899999999999653 3699999999999999999999999999999 58999999


Q ss_pred             HHHHHHHH-hCCCCcEEEecc---CCcEEEEEEeeecCCCceeeCCCCCCCCCCCC-Cceee
Q 047133           81 KYTRAINT-RYGTTPLYKCLN---TSLLMEVTLCVDAKARNFVSCIARPSSLSSCP-GDIIW  137 (139)
Q Consensus        81 ~i~~al~~-~g~~~p~l~C~~---~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~-~~i~~  137 (139)
                      +|++||++ +| ..|.|.|.+   +++|.||++|+|+++.++++||...  ..+|| ..|.|
T Consensus       137 ~i~~ai~~~~g-~~~~l~C~~~~~~~~L~Ev~iC~~~~~~~~~~C~~~~--~~~C~~~~i~~  195 (195)
T cd00374         137 FIQNAIKAATG-ATPSLKCTKDPGKGLLTEIWICFDKDALKFIDCPTPG--KSTCPADGIKF  195 (195)
T ss_pred             HHHHHHHHHHC-CCcEEEeccCCCCcEEEEEEEEEECCCCeEEeCCCCC--CCCCCCCcEEC
Confidence            99999999 98 899999986   2799999999999944899999854  46799 55765

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen.

>PF00445 Ribonuclease_T2: Ribonuclease T2 family; InterPro: IPR001568 The fungal ribonucleases T2 from Aspergillus oryzae, M from Aspergillus saitoi and Rh from Rhizopus niveus are structurally and functionally related 30 Kd glycoproteins [] that cleave the 3'-5' internucleotide linkage of RNA via a nucleotide 2',3'-cyclic phosphate intermediate (3

Probab=100.00  E-value=4.5e-35  Score=219.29  Aligned_cols=113  Identities=32%  Similarity=0.693  Sum_probs=99.6

Q ss_pred             hHHHHHhccCCCCccCCCCC-hhhHHHhhhcccccCC-C-CChHHHHHHHHHHHHhcCHHHHHHhCCCCC-CCCCCCHHH
Q 047133            6 SFAAEMNKFWPSLTRDENEN-EQFWEREWKHHGRGQP-T-LPPEEYFRTAITLVKAANLEAAFRGAGINP-DGDKLNPRK   81 (139)
Q Consensus         6 ~l~~~L~~~Wp~l~~~~~~~-~~fw~hEW~KHGt~~~-~-~~~~~YF~~al~l~~~~~i~~~L~~~gI~P-~~~~y~~~~   81 (139)
                      +++++|+.+||++.   .++ ..||+|||.|||||.. . .++.+||.+|++|++++|+.++|+++||+| ++..|++++
T Consensus        65 ~~~~~L~~~Wp~~~---~~~~~~fw~hEW~KHGtC~~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~gI~p~~~~~~~~~~  141 (189)
T PF00445_consen   65 ELKSELDKYWPDLK---NSNSESFWKHEWEKHGTCSGMDFIDQYDYFSTALKLYKKLNLPKILANAGIVPSNGKTYSLSD  141 (189)
T ss_dssp             GGHHHHHHHSTBSS---SSHHHHHHHHHHHHTGGGGTTTSSSHHHHHHHHHHHHHHCHHHHHHHHTTHCSCSSEEEEHHH
T ss_pred             HHhhhhhhhhhhhc---cchhhhhHHhcceeeeEEcCCchhhHHHHHHHHHHHHHhccchHHHhhcccCCCccccccHHH
Confidence            89999999999994   233 6999999999999653 2 259999999999999999999999999999 567899999


Q ss_pred             HHHHHHH-h-CCCCcEEEeccCC------cEEEEEEeeecCCCceeeCCC
Q 047133           82 YTRAINT-R-YGTTPLYKCLNTS------LLMEVTLCVDAKARNFVSCIA  123 (139)
Q Consensus        82 i~~al~~-~-g~~~p~l~C~~~~------~L~Ev~~C~~~~~~~~i~Cp~  123 (139)
                      |++||++ + | ..|.|+|.+ .      +|.||++|+|+++.++||||.
T Consensus       142 i~~al~~~~~~-~~~~l~C~~-~~~~~~~~L~ei~iC~~~~~~~~idCp~  189 (189)
T PF00445_consen  142 IRDALKQAFNG-VRPQLRCSR-NQVNGEQYLTEIRICFDKDLFQFIDCPC  189 (189)
T ss_dssp             HHHHHHHHHTS-SGEEEEEEC-TETTSEEEEEEEEEEEETTSSSEE--S-
T ss_pred             HHHHHHHHcCC-CceEEEEec-CCCCCcEEEEEEEEEEeCCCCeEeCCcC
Confidence            9999999 8 6 899999987 5      999999999999878999983

1.27.1 from EC). Two histidines residues have been shown [, ] to be involved in the catalytic mechanism of RNase T2 and Rh. These residues and the region around them are highly conserved in a number of other RNAses that have been found to be evolutionary related to these fungal enzymes.; GO: 0003723 RNA binding, 0033897 ribonuclease T2 activity; PDB: 1IOO_A 3D3Z_A 1UCG_B 1UCC_A 1J1F_A 1V9H_A 1UCD_A 1J1G_A 1UCA_A 1BK7_A ....

>cd01062 RNase_T2_prok Ribonuclease T2 (RNase T2) is a widespread family of secreted RNases found in every organism examined thus far

Probab=99.96  E-value=1.2e-29  Score=189.56  Aligned_cols=113  Identities=25%  Similarity=0.487  Sum_probs=97.7

Q ss_pred             hhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCCCChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCHHHHHH
Q 047133            5 KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTR   84 (139)
Q Consensus         5 ~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~~~i~~   84 (139)
                      .+++.+|..+||+        ..||+|||+|||||.. +++.+||++|++|++++|+..+|+..++.+ +  |+.++|++
T Consensus        63 ~~~~~~l~~~~p~--------~~~w~hEW~KHGtC~~-~~~~~YF~~a~~l~~~~~~~~~l~~~~~~~-~--~~~~~i~~  130 (184)
T cd01062          63 EETRSRLLDVMPA--------SGLIRHEWRKHGTCSG-LDPDAYFAKARNLREALKIPPELRLLAGNI-G--VTASEIRQ  130 (184)
T ss_pred             HHHHHHHHhhCCc--------hhHhHHHHhcCCcCCC-CCHHHHHHHHHHHHHHcCcchhhhhccccC-C--cCHHHHHH
Confidence            5688899999993        4599999999999653 799999999999999999999999875432 3  99999999


Q ss_pred             HHHH-hCCCCc----EEEeccCCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCc
Q 047133           85 AINT-RYGTTP----LYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGD  134 (139)
Q Consensus        85 al~~-~g~~~p----~l~C~~~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~  134 (139)
                      ||++ +| ..|    .|.|.+ ++|.||++|+|+++ ++++||...  ..+|++.
T Consensus       131 a~~~~~~-~~~~~~~~~~C~~-~~L~Ei~iC~~~~~-~~~~C~~~~--~~~C~~~  180 (184)
T cd01062         131 AFIKANP-GLPPDAVSVSCQG-GLLTEVRICLDKDL-KFAACPTAD--RDNCPAG  180 (184)
T ss_pred             HHHHHCC-CCCCceEEEEECC-CeEEEEEEEeCccc-CcccCCccc--cCCCCCC
Confidence            9999 88 555    899987 99999999999998 899999843  3569965

This family includes RNase Rh, RNase MC1, RNase LE, and self-incompatibility RNases (S-RNases). Plant T2 RNases are expressed during leaf senescence in order to scavenge phosphate from ribonucleotides. They are also expressed in response to wounding or pathogen invasion. S-RNases are thought to prevent self-fertilization by acting as selective cytotoxins of "self" pollen. Generally, RNases have two distinct binding sites: the primary site (B1 site) and the subsite (B2 site), for nucleotides located at the 5'- and 3'- terminal ends of the sessil bond, respectively. This CD includes the prokaryotic RNase T2 family members.

>PRK10095 ribonuclease I; Provisional

Probab=99.88  E-value=5.8e-22  Score=155.77  Aligned_cols=120  Identities=18%  Similarity=0.297  Sum_probs=93.5

Q ss_pred             hhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCCCChHHHHHHHHHHHHhcCHHH---HHHhCCCCCCCCCCCHHH
Q 047133            5 KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEA---AFRGAGINPDGDKLNPRK   81 (139)
Q Consensus         5 ~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~~~~~~YF~~al~l~~~~~i~~---~L~~~gI~P~~~~y~~~~   81 (139)
                      .++...|..+.|+..    ....||+|||+|||||. .+++.+||.++++|++++|++.   +|.++    .++.|++++
T Consensus       129 ~~~~~~l~~~mP~~~----~~s~l~~heW~KHGtC~-~~~~~~YF~~al~L~~kvn~s~~~~~L~~~----~Gk~~s~~~  199 (268)
T PRK10095        129 LETAAKLSEVMPGAG----GRSCLERYEYAKHGACF-GFDPDAYFGTMVRLNQEIKESEAGKFLADN----YGKTVSRRD  199 (268)
T ss_pred             HHHHHHHHHhCCCCC----ccchhHHHHHHhCCeec-CCCHHHHHHHHHHHHHHhchhhhhhhhhcC----CCcEEcHHH
Confidence            557778888888882    12479999999999965 2799999999999999999644   56553    378999999


Q ss_pred             HHHHHHH-hCC---CCcEEEeccC-CcEEEEEEeeecCC-------CceeeCCCCCCCCCCCCCceee
Q 047133           82 YTRAINT-RYG---TTPLYKCLNT-SLLMEVTLCVDAKA-------RNFVSCIARPSSLSSCPGDIIW  137 (139)
Q Consensus        82 i~~al~~-~g~---~~p~l~C~~~-~~L~Ev~~C~~~~~-------~~~i~Cp~~~~~~~~C~~~i~~  137 (139)
                      |++||++ +|.   ..|.|+|.++ .+|.||+||++++.       ..+++|+.    ..+|+..|+.
T Consensus       200 I~~Ai~~a~G~~~~~~~~L~C~~~~~~L~EV~ICl~~~~~~~~l~~~~~~~~~~----~~~C~~~~~i  263 (268)
T PRK10095        200 FDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISLKADAINAPLSANSFLPQPH----PGNCGKQFVI  263 (268)
T ss_pred             HHHHHHHHhCCCCCCcceEEeCCCCcEEEEEEEEcccccccCCchhhhccCCCC----CCCCCCCeee
Confidence            9999999 872   3469999872 38999999999882       13455654    3569988654

>COG3719 Rna Ribonuclease I [Translation, ribosomal structure and biogenesis]

Probab=99.84  E-value=8.8e-21  Score=145.65  Aligned_cols=103  Identities=22%  Similarity=0.414  Sum_probs=86.4

Q ss_pred             CChhhHHHhhhcccccCCCCChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCHHHHHHHHHH-hCCC---CcEEEec
Q 047133           24 ENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINT-RYGT---TPLYKCL   99 (139)
Q Consensus        24 ~~~~fw~hEW~KHGt~~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~~~i~~al~~-~g~~---~p~l~C~   99 (139)
                      ++..|-+|||+|||||.. ++|.+||.++++|+++++++..+....   ++++++..+|..||.+ +|+.   .+.+.|.
T Consensus       131 Pg~~L~~heW~KHGtC~g-~s~~~YFa~~r~l~~~l~~p~~~~~~a---~~~~ls~~ei~~AF~~~n~~~~~~~v~vsc~  206 (249)
T COG3719         131 PGAGLERHEWRKHGTCSG-LSQEAYFATTRRLFEELKLPPVRKLLA---DGKTLSRDEIEQAFDKANGGLKGDAVRVSCQ  206 (249)
T ss_pred             CchhhhhhhHHhcCccCC-CCHHHHHHHHHHHHHHhcCCccccccc---cccccCHHHHHHHHHHhCCCCCchheEEEee
Confidence            344599999999999753 799999999999999999998765442   3688999999999999 8753   3689999


Q ss_pred             cCCcEEEEEEeeecCCCceeeC----CCCCCCCCCCCCc
Q 047133          100 NTSLLMEVTLCVDAKARNFVSC----IARPSSLSSCPGD  134 (139)
Q Consensus       100 ~~~~L~Ev~~C~~~~~~~~i~C----p~~~~~~~~C~~~  134 (139)
                      . ++|+||+||+|+++ ++++|    |.+.  ...|+.+
T Consensus       207 ~-~~LtEl~Icl~~~~-~~~ac~~~~~~~~--~~~C~~~  241 (249)
T COG3719         207 G-NYLTELRICLDKDL-QNAACLADLPQPD--PGNCRKT  241 (249)
T ss_pred             c-cceeeEEEEEcccc-ccchhhccCCCCC--ccccccc
Confidence            8 89999999999999 89999    6533  3469876

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	139
1iyb_A	208	Crystal Structure Of The Nicotiana Glutinosa Ribonu		2e-12
1dix_A	208	Crystal Structure Of Rnase Le Length = 208		4e-12
1vcz_A	217	Crystal Structure Of The Rnase Nt In Complex With 5		3e-10
1iqq_A	200	Crystal Structure Of Japanese Pear S3-Rnase Length		9e-09
1j1g_A	190	Crystal Structure Of The Rnase Mc1 Mutant N71s In C		1e-08
1j1f_A	191	Crystal Structure Of The Rnase Mc1 Mutant N71t In C		2e-08
1ucg_A	190	Crystal Structure Of Ribonuclease Mc1 N71t Mutant L		5e-08
1bk7_A	190	Ribonuclease Mc1 From The Seeds Of Bitter Gourd Len		6e-08
1bol_A	222	The Crystal Structure Of Ribonuclease Rh From Rhizo		7e-08
3t0o_A	238	Crystal Structure Analysis Of Human Rnase T2 Length		1e-07
1v9h_A	197	Crystal Structure Of The Rnase Mc1 Mutant Y101a In		3e-07
1sgl_A	209	The Three-Dimensional Structure And X-Ray Sequence		9e-06
3d3z_A	247	Crystal Structure Of Actibind A T2 Rnase Length = 2		3e-05
3tbj_A	237	The 1.7a Crystal Structure Of Actibind A T2 Ribonuc		3e-05

>pdb|1IYB|A Chain A, Crystal Structure Of The Nicotiana Glutinosa Ribonuclease Nw Length = 208

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           + M + WP+L         FW  EW+ HG   +       YF+ A+ L    NL    +G
Sbjct: 74  SRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQG 133
Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIA 123
           AGI+PDG   +      AI +  G  P  +C       S L ++ +CVD    N + C  
Sbjct: 134 AGIHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIECPI 193
Query: 124 RP 125
            P
Sbjct: 194 FP 195

>pdb|1DIX|A Chain A, Crystal Structure Of Rnase Le Length = 208

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 6/123 (4%)
Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEE--YFRTAITLVKAANLEAAFR 66
           + M + WP+L         FW  EW+ HG    ++   +  YF+ A+ L    +L +  +
Sbjct: 73  SSMQQNWPTLACPSGSGSTFWSHEWEKHGTCAESVLTNQHAYFKKALDLKNQIDLLSILQ 132
Query: 67  GAGINPDGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCI 122
           GA I+PDG+  +      AI +  G TP  +C       S L +V +CVD    + + C 
Sbjct: 133 GADIHPDGESYDLVNIRNAIKSAIGYTPWIQCNVDQSGNSQLYQVYICVDGSGSSLIECP 192
Query: 123 ARP 125
             P
Sbjct: 193 IFP 195

>pdb|1VCZ|A Chain A, Crystal Structure Of The Rnase Nt In Complex With 5'-Gmp Length = 217

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 11  MNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGI 70
           M K WPSL    ++  +FW  EW  HG     L    YF+ A+   K +NL    + A I
Sbjct: 76  MEKNWPSLACPSSDGVRFWSHEWLKHGTCS-ALGERAYFQAALDFRKKSNLLENLKNAEI 134
Query: 71  NP-DGDKLNPRKYTRAINTRYGTTPLYKC----LNTSLLMEVTLCVDAKARNFVSCIARP 125
            P +G+        +AI    G +P  +C         + +V LCVD  A +F+ C   P
Sbjct: 135 TPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGNHQIYQVYLCVDKTATDFIDCPIFP 194

>pdb|1IQQ|A Chain A, Crystal Structure Of Japanese Pear S3-Rnase Length = 200

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 62/142 (43%), Gaps = 11/142 (7%)
Query: 5   KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPE-EYFRTAITLV--KAAN 60
           K    ++   WP++  D  +N  FW++EW  HG  G PT+  E  YF T I +   K  N
Sbjct: 58  KLLEHQLEIIWPNVF-DRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQN 116
Query: 61  LEAAFRGAGINPDGDKLNPRKYTRAI----NTRYGTTPLYKCLNTSLLMEVTLCVDAKAR 116
           +      A I PDG K        AI    + +       K   T+ L+E+TLC D    
Sbjct: 117 VSRILSKAKIEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGE 176
Query: 117 NFVSCIA--RPSSLSSCPGDII 136
           +F+ C     P S   CP + I
Sbjct: 177 HFIDCPHPFEPISPHYCPTNNI 198

>pdb|1J1G|A Chain A, Crystal Structure Of The Rnase Mc1 Mutant N71s In Complex With 5'-Gmp Length = 190

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           +++N  WPS+ R  N+  QFW  EW  HG   + T     YF+ A+ +    ++  A R 
Sbjct: 63  SQLNTLWPSVLRANNQ--QFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP 120
Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC-----LNTSLLMEVTLCVDAKARNFVSC 121
               P+G   + +     +  ++G  P  +C        S L+EV  C        + C
Sbjct: 121 HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVEVVACFAQDGSTLIDC 179

>pdb|1J1F|A Chain A, Crystal Structure Of The Rnase Mc1 Mutant N71t In Complex With 5'-Gmp Length = 191

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           +++N  WP++ R  N+  QFW  EW  HG   + T     YF+ A+ +    ++  A R 
Sbjct: 64  SQLNTLWPTVLRANNQ--QFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP 121
Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC-----LNTSLLMEVTLCVDAKARNFVSC 121
               P+G   + +     +  ++G  P  +C        S L+EV  C        + C
Sbjct: 122 HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVEVVACFAQDGSTLIDC 180

>pdb|1UCG|A Chain A, Crystal Structure Of Ribonuclease Mc1 N71t Mutant Length = 190

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           +++N  WP++ R  N+  QFW  EW  HG   + T     YF+ A+ +    ++  A R 
Sbjct: 63  SQLNTLWPTVLRANNQ--QFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP 120
Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC-----LNTSLLMEVTLCVDAKARNFVSC 121
               P+G   + +     +  ++G  P  +C        S L++V  C        + C
Sbjct: 121 HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC 179

>pdb|1BK7|A Chain A, Ribonuclease Mc1 From The Seeds Of Bitter Gourd Length = 190

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 8/119 (6%)
Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           +++N  WP++ R  N+  QFW  EW  HG   + T     YF+ A+ +    ++  A R 
Sbjct: 63  SQLNTLWPNVLRANNQ--QFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP 120
Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC-----LNTSLLMEVTLCVDAKARNFVSC 121
               P+G   + +     +  ++G  P  +C        S L++V  C        + C
Sbjct: 121 HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC 179

>pdb|1BOL|A Chain A, The Crystal Structure Of Ribonuclease Rh From Rhizopus Niveus At 2.0 A Resolution Length = 222

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 57/144 (39%), Gaps = 18/144 (12%)
Query: 4   NKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPE------------EYFRT 51
           + S    M  +WPS   ++  N  FW  EW  HG    T  P+            +YF+ 
Sbjct: 80  DSSLYNSMLTYWPS---NQGNNNVFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQK 136
Query: 52  AITLVKAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCV 111
           A+ L    N+  AF   GI P G      +   AI + +G      C ++  L +V L  
Sbjct: 137 AMDLRSQYNVYKAFSSNGITP-GGTYTATEMQSAIESYFGAKAKIDC-SSGTLSDVALYF 194
Query: 112 DAKARNFVSCIARPSSLSSCPGDI 135
             + R+    I    S  SC GD+
Sbjct: 195 YVRGRD-TYVITDALSTGSCSGDV 217

>pdb|3T0O|A Chain A, Crystal Structure Analysis Of Human Rnase T2 Length = 238

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 10/131 (7%)
Query: 1   LESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTL----PPEEYFRTAITLV 56
           LE  K    EM  +WP +        +FW+ EW+ HG     +      ++YF  ++ L 
Sbjct: 59  LEEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELY 118
Query: 57  KAANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTS------LLMEVTLC 110
           +  +L +     GI P  +      +  A+   YG  P  +CL  S       + ++ LC
Sbjct: 119 RELDLNSVLLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELC 178
Query: 111 VDAKARNFVSC 121
           +  + +   +C
Sbjct: 179 LTKQDQQLQNC 189

>pdb|1V9H|A Chain A, Crystal Structure Of The Rnase Mc1 Mutant Y101a In Complex With 5'-Ump Length = 197

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           +++N  WP++ R  N+  QFW  EW  HG   + T      F+ A+ +    ++  A R 
Sbjct: 70  SQLNTLWPNVLRANNQ--QFWSHEWTKHGTCSESTFNQAAAFKLAVDMRNNYDIIGALRP 127
Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKC-----LNTSLLMEVTLCVDAKARNFVSC 121
               P+G   + +     +  ++G  P  +C        S L+EV  C        + C
Sbjct: 128 HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVEVVACFAQDGSTLIDC 186

>pdb|1SGL|A Chain A, The Three-Dimensional Structure And X-Ray Sequence Reveal That Trichomaglin Is A Novel S-Like Ribonuclease Length = 209

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 7   FAAEMNKFWPSL-----TRDENENEQFWEREWKHHGR-GQPTLPPE-EYFRTAITLVKAA 59
           F  ++ ++WP+          N  E  W ++++ HG    P +  E  YF+  + L    
Sbjct: 71  FFGKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKY 130
Query: 60  NLEAAFRGAGINPDGDKL-NPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDA--KAR 116
           N++ A   AGI     K+ + +    A+ +  G  P  +C    L+ +++LC D   K R
Sbjct: 131 NVDKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRCDEEGLVQKLSLCFDKDFKPR 190
Query: 117 NFVSCIARPSSLS 129
           + V   + P  +S
Sbjct: 191 DCVQVGSCPRYVS 203

>pdb|3D3Z|A Chain A, Crystal Structure Of Actibind A T2 Rnase Length = 247

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Query: 11  MNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPE------------EYFRTAITLVKA 58
           M ++WP      +E+E FWE EW  HG    T+ P             ++F+  + L K 
Sbjct: 91  MKEYWPDY-EGADEDESFWEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKT 149
Query: 59  ANLEAAFRGAGINPDGD 75
            +   A   AGI P  D
Sbjct: 150 LDSYTALSDAGITPSED 166

>pdb|3TBJ|A Chain A, The 1.7a Crystal Structure Of Actibind A T2 Ribonucleases As Antitumorigenic Agents Length = 237

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Query: 11  MNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPE------------EYFRTAITLVKA 58
           M ++WP      +E+E FWE EW  HG    T+ P             ++F+  + L K 
Sbjct: 91  MKEYWPDY-EGADEDESFWEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKT 149
Query: 59  ANLEAAFRGAGINPDGD 75
            +   A   AGI P  D
Sbjct: 150 LDSYTALSDAGITPSED 166

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	139
1iyb_A	208	Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP	7e-25
1ucd_A	190	Ribonuclease MC; alpha plus beta, hydrolase; HET:	5e-23
3t0o_A	238	Ribonuclease T2, ribonuclease 6; rnaset2, alpha/be	3e-22
1vcz_A	217	RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.8	9e-21
1ioo_A	196	SF11-RNAse; SELF-incompatibility ribonuclease, hyd	2e-19
1jy5_A	212	CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2	3e-19
1sgl_A	209	Trichomaglin; S-like ribonuclease, X-RAY sequence,	7e-19
1iqq_A	200	S3-RNAse; japanese PEAR, SELF-incompatibilit famil	8e-19
1bol_A	222	Protein (ribonuclease RH); ribonucleases, hydrolas	5e-15
3d3z_A	247	Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {A	5e-14
2pqx_A	245	Ribonuclease I; hydrolase; HET: MES; 1.42A {Escher	5e-13

>1iyb_A Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP; 1.50A {Nicotiana glutinosa} SCOP: d.124.1.1 PDB: 1dix_A Length = 208

 Score = 93.5 bits (232), Expect = 7e-25
 Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 7/133 (5%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           + M + WP+L         FW  EW+ HG   +       YF+ A+ L    NL    +G
Sbjct: 74  SRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQG 133

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKCLN----TSLLMEVTLCVDAKARNFVSCIA 123
           AGI+PDG   +      AI +  G  P  +C       S L ++ +CVD    N + C  
Sbjct: 134 AGIHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIECPI 193

Query: 124 RPSSLSSCPGDII 136
            P     C   I 
Sbjct: 194 FPR--GKCGSSIE 204

>1ucd_A Ribonuclease MC; alpha plus beta, hydrolase; HET: U5P; 1.30A {Momordica charantia} SCOP: d.124.1.1 PDB: 1bk7_A* 1ucc_A* 1uca_A* 1v9h_A* 1j1f_A* 1ucg_A 1j1g_A* Length = 190

 Score = 88.1 bits (218), Expect = 5e-23
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 13/134 (9%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           +++N  WP++ R  N+   FW  EW  HG   + T     YF+ A+ +    ++  A R 
Sbjct: 63  SQLNTLWPNVLRANNQQ--FWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP 120

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKCL-----NTSLLMEVTLCVDAKARNFVSCI 122
               P+G   + +     +  ++G  P  +C        S L++V  C        + C 
Sbjct: 121 HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC- 179

Query: 123 ARPSSLSSCPGDII 136
               +  +C  + I
Sbjct: 180 ----TRDTCGANFI 189

>3t0o_A Ribonuclease T2, ribonuclease 6; rnaset2, alpha/beta fold, RNA cleavage, hydrol; HET: NAG; 1.59A {Homo sapiens} Length = 238

 Score = 87.2 bits (215), Expect = 3e-22
 Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 12/139 (8%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPP----EEYFRTAITLVKAANLEAA 64
            EM  +WP +        +FW+ EW+ HG     +      ++YF  ++ L +  +L + 
Sbjct: 67  PEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSV 126

Query: 65  FRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCL------NTSLLMEVTLCVDAKARNF 118
               GI P  +      +  A+   YG  P  +CL          + ++ LC+  + +  
Sbjct: 127 LLKLGIKPSINYYQVADFKDALARVYGVIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQL 186

Query: 119 VSCIARPSSLSSCPGDIIW 137
            +C          P   +W
Sbjct: 187 QNC--TEPGEQPSPKQEVW 203

>1vcz_A RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.80A {Nicotiana glutinosa} PDB: 1vd1_A* 1vd3_A* Length = 217

 Score = 83.2 bits (205), Expect = 9e-21
 Identities = 38/134 (28%), Positives = 55/134 (41%), Gaps = 7/134 (5%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGA 68
           + M K WPSL    ++  +FW  EW  HG     L    YF+ A+   K +NL    + A
Sbjct: 74  STMEKNWPSLACPSSDGVRFWSHEWLKHGTCS-ALGERAYFQAALDFRKKSNLLENLKNA 132

Query: 69  GINPDGDK-LNPRKYTRAINTRYGTTPLYKCL----NTSLLMEVTLCVDAKARNFVSCIA 123
            I P   +        +AI    G +P  +C         + +V LCVD  A +F+ C  
Sbjct: 133 EITPRNGEHYTLESIKKAIEEGVGHSPYIECNVDTQGNHQIYQVYLCVDKTATDFIDCPI 192

Query: 124 RPSSLSSCPGDIIW 137
            P     C   I +
Sbjct: 193 FPHG-RGCGSKIEF 205

>1ioo_A SF11-RNAse; SELF-incompatibility ribonuclease, hydrolase; HET: NAG BMA MAN; 1.55A {Nicotiana alata} SCOP: d.124.1.1 Length = 196

 Score = 79.0 bits (194), Expect = 2e-19
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 11/136 (8%)

Query: 9   AEMNKFWPSLTRDENE---NEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAA 64
            +++K W  L  +++     +  W+ ++  HG   Q       YF  A+ L    +L   
Sbjct: 61  NDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRT 120

Query: 65  FRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCL----NTSLLMEVTLCVDAKARNFVS 120
            +   I P G     +    AI T     P  KC      T  L E+ +C    A +   
Sbjct: 121 LQTHRIIP-GSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNADSMFR 179

Query: 121 CIARPSSLSSCPGDII 136
           C    +        ++
Sbjct: 180 CPQSDT--CDKTAKVL 193

>1jy5_A CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2.05A {Calystegia sepium} SCOP: d.124.1.1 Length = 212

 Score = 78.9 bits (194), Expect = 3e-19
 Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 13/137 (9%)

Query: 9   AEMNKFWPSLTRDENE-----NEQFWEREWKHHG--RGQPTLPPEEYFRTAITLVKAANL 61
            +++K+WPS +   +      +      EW  HG           EYF T + L    N+
Sbjct: 73  NDLSKYWPSYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNI 132

Query: 62  EAAFRGAGINP-DGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVS 120
                 +G  P +  +        AI +    TP+ KC + ++  +V +C D K      
Sbjct: 133 SEILSESGYLPSNTAEYKVEGIMSAIQSALRVTPVVKCKSDAVE-QVQICFD-KTLQLQE 190

Query: 121 CIARPSSLSSCPGDIIW 137
           C   PS+ S+CP  +  
Sbjct: 191 C---PSTASTCPSLVSL 204

>1sgl_A Trichomaglin; S-like ribonuclease, X-RAY sequence, MASS SPEC analysis, hydrolase; 2.20A {Trichosanthes lepiniana} SCOP: d.124.1.1 Length = 209

 Score = 77.7 bits (191), Expect = 7e-19
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 13/136 (9%)

Query: 9   AEMNKFWPSLTRDENE-----NEQFWEREWKHHG--RGQPTLPPEEYFRTAITLVKAANL 61
            ++ ++WP+      +      E  W ++++ HG            YF+  + L    N+
Sbjct: 73  GKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNV 132

Query: 62  EAAFRGAGINPDGDKLNPRK-YTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVS 120
           + A   AGI     K+   K    A+ +  G  P  +C    L+ +++LC D K      
Sbjct: 133 DKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRCDEEGLVQKLSLCFD-KDFKPRD 191

Query: 121 CIARPSSLSSCPGDII 136
           C      + SCP  + 
Sbjct: 192 C----VQVGSCPRYVS 203

>1iqq_A S3-RNAse; japanese PEAR, SELF-incompatibilit family ribonuclease, hydrolase; HET: NAG BMA MAN; 1.50A {Pyrus pyrifolia} SCOP: d.124.1.1 Length = 200

 Score = 77.5 bits (190), Expect = 8e-19
 Identities = 41/139 (29%), Positives = 56/139 (40%), Gaps = 11/139 (7%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR--GQPTLPPEEYFRTAIT--LVKAANLEAA 64
            ++   WP++  D  +N  FW++EW  HG            YF T I   + K  N+   
Sbjct: 62  HQLEIIWPNVF-DRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRI 120

Query: 65  FRGAGINPDGDKLNPRKYTRAINTR-YGTTPLYKCL---NTSLLMEVTLCVDAKARNFVS 120
              A I PDG K        AI        P  KC     T+ L+E+TLC D    +F+ 
Sbjct: 121 LSKAKIEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGEHFID 180

Query: 121 C--IARPSSLSSCPGDIIW 137
           C     P S   CP + I 
Sbjct: 181 CPHPFEPISPHYCPTNNIK 199

>1bol_A Protein (ribonuclease RH); ribonucleases, hydrolase; 2.00A {Rhizopus niveus} SCOP: d.124.1.1 Length = 222

 Score = 68.0 bits (165), Expect = 5e-15
 Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 20/141 (14%)

Query: 10  EMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPE------------EYFRTAITLVK 57
            M  +WPS   +   N  FW  EW  HG    T  P+            +YF+ A+ L  
Sbjct: 86  SMLTYWPSNQGN---NNVFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRS 142

Query: 58  AANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKAR- 116
             N+  AF   GI P G      +   AI + +G      C + +L  +V L    + R 
Sbjct: 143 QYNVYKAFSSNGITPGG-TYTATEMQSAIESYFGAKAKIDCSSGTLS-DVALYFYVRGRD 200

Query: 117 NFVSCIARPSSLSSCPGDIIW 137
            +V       S  SC GD+ +
Sbjct: 201 TYVIT--DALSTGSCSGDVEY 219

>3d3z_A Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {Aspergillus niger} Length = 247

 Score = 65.7 bits (159), Expect = 5e-14
 Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 22/147 (14%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPE------------EYFRTAITLV 56
           + M ++WP     +  +E FWE EW  HG    T+ P             ++F+  + L 
Sbjct: 89  SYMKEYWPDYEGADE-DESFWEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLF 147

Query: 57  KAANLEAAFRGAGINP-DGDKLNPRKYTRAINTRY-GTTPLYKCLNTSLLMEVTLCVDAK 114
           K  +   A   AGI P +           A+   + G  P   C + +L  ++    + K
Sbjct: 148 KTLDSYTALSDAGITPSEDATYKLSDIEDALAAIHDGYPPYVGCEDGALS-QLYYYFNVK 206

Query: 115 AR----NFVSCIARPSSLSSCPGDIIW 137
                  +V+        S+C    I 
Sbjct: 207 GSAIGGTYVAS--ERLEDSNCKDSGIK 231

>2pqx_A Ribonuclease I; hydrolase; HET: MES; 1.42A {Escherichia coli} PDB: 2ea1_A* 2pqy_A* 2z70_A* Length = 245

 Score = 63.0 bits (152), Expect = 5e-13
 Identities = 26/138 (18%), Positives = 48/138 (34%), Gaps = 16/138 (11%)

Query: 8   AAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           AA++++  P               E+  HG       P+ YF T + L +      A + 
Sbjct: 109 AAKLSEVMPG----AGGRSCLERYEYAKHGACFG-FDPDAYFGTMVRLNQEIKESEAGKF 163

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKCL-----NTSLLMEVTLCVDAKARN----F 118
              N  G  ++ R +  A    +G   +         N + L E+ + + A A N     
Sbjct: 164 LADNY-GKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISIKADAINAPLSA 222

Query: 119 VSCIARPSSLSSCPGDII 136
            S + +P    +C    +
Sbjct: 223 NSFLPQPHP-GNCGKTFV 239

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	139
1iyb_A	208	Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP	100.0
1vcz_A	217	RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.8	100.0
1ucd_A	190	Ribonuclease MC; alpha plus beta, hydrolase; HET:	100.0
1sgl_A	209	Trichomaglin; S-like ribonuclease, X-RAY sequence,	100.0
1jy5_A	212	CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2	100.0
1iqq_A	200	S3-RNAse; japanese PEAR, SELF-incompatibilit famil	100.0
1ioo_A	196	SF11-RNAse; SELF-incompatibility ribonuclease, hyd	100.0
3t0o_A	238	Ribonuclease T2, ribonuclease 6; rnaset2, alpha/be	100.0
1bol_A	222	Protein (ribonuclease RH); ribonucleases, hydrolas	100.0
3d3z_A	247	Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {A	100.0
2pqx_A	245	Ribonuclease I; hydrolase; HET: MES; 1.42A {Escher	99.97
4dvk_A	165	E(RNS) glycoprotein; T2 ribonuclease, virus envelo	99.17

>1iyb_A Ribonuclease, ribonuclease M5; hydrolase; HET: 5GP; 1.50A {Nicotiana glutinosa} SCOP: d.124.1.1 PDB: 1dix_A

Probab=100.00  E-value=9.8e-41  Score=252.76  Aligned_cols=133  Identities=28%  Similarity=0.576  Sum_probs=118.3

Q ss_pred             cchhHHHHHhccCCCCccCCCCChhhHHHhhhccccc-CCCCChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCHHH
Q 047133            3 SNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRG-QPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRK   81 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~-~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~~~   81 (139)
                      .+++++++|+.+||+|.++.+++..||+|||+||||| ...++|.+||++|++|++++|++++|+++||+|++++|++++
T Consensus        68 ~i~~l~~~L~~~Wp~l~~~~~~~~~fW~hEw~KHGTC~~~~~~q~~YF~~a~~l~~~~~~~~~L~~~gI~P~~~~~t~~~  147 (208)
T 1iyb_A           68 QVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQGAGIHPDGGFYSLNS  147 (208)
T ss_dssp             GGGGGHHHHHHHSCCCCSSCCCSHHHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHHCCHHHHHHHTTCCSSSCEEEHHH
T ss_pred             hcchhhhHhhccCCCcccCCCCcchHHHhhccCCeeeCccccCHHHHHHHHHHHHHHcChHHHHHHCCcccCCceEeHHH
Confidence            4567999999999999655677899999999999995 544599999999999999999999999999999777899999


Q ss_pred             HHHHHHH-hCCCCcEEEecc----CCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceeec
Q 047133           82 YTRAINT-RYGTTPLYKCLN----TSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWA  138 (139)
Q Consensus        82 i~~al~~-~g~~~p~l~C~~----~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~p  138 (139)
                      |++||++ +| ..|.|+|..    ..+|.||++|||+++.++|+||...  ..+||+.|.||
T Consensus       148 I~~Ai~~~~g-~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~C~~~~--~~~C~~~i~~p  206 (208)
T 1iyb_A          148 IKNAIRSAIG-YAPGIECNVDESGNSQLYQIYICVDGSGSNLIECPIFP--RGKCGSSIEFP  206 (208)
T ss_dssp             HHHHHHHHHS-SCCEEEEEECTTCCEEEEEEEEEEETTSSSBCCCSCCC--CCCCCSEEECC
T ss_pred             HHHHHHHHhC-CCeEEEEeeCCCCCeEEEEEEEEecCCCCeeecCCCCC--CCCCCCCcCcC
Confidence            9999999 98 899999974    3699999999999976999999743  34799999987

>1vcz_A RNAse NGR3; hydrolase, ribonuclease; HET: 5GP; 1.80A {Nicotiana glutinosa} PDB: 1vd1_A* 1vd3_A*

Probab=100.00  E-value=5.8e-40  Score=249.99  Aligned_cols=133  Identities=29%  Similarity=0.584  Sum_probs=117.5

Q ss_pred             cchhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCCCChHHHHHHHHHHHHhcCHHHHHHhCCCCC-CCCCCCHHH
Q 047133            3 SNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLEAAFRGAGINP-DGDKLNPRK   81 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P-~~~~y~~~~   81 (139)
                      .+.+|+++|+.+||++.++..++..||+|||+|||||.. .+|.+||++|++|++++|++++|+++||+| ++..|++++
T Consensus        68 ~~~~l~~~L~~~Wp~l~~~~~~~~~fW~hEw~KHGTC~~-~~~~~YF~~a~~l~~~~n~~~~L~~~gI~Ps~g~~~t~~~  146 (217)
T 1vcz_A           68 EISDLISTMEKNWPSLACPSSDGVRFWSHEWLKHGTCSA-LGERAYFQAALDFRKKSNLLENLKNAEITPRNGEHYTLES  146 (217)
T ss_dssp             GGGGGHHHHHHHSCCCSSSCCCSHHHHHHHHHHTGGGTT-SCHHHHHHHHHHHHHHHCHHHHHHHTTCCCEEEEEEEHHH
T ss_pred             hhhhhhhhhhccCcccccCCCCcchHHhhhccCCeecCC-CCHHHHHHHHHHHHHHcccHHHHHHCCCccCcCccccHHH
Confidence            467899999999999965566778999999999999653 399999999999999999999999999999 678899999


Q ss_pred             HHHHHHH-hCCCCcEEEecc----CCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceeec
Q 047133           82 YTRAINT-RYGTTPLYKCLN----TSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWA  138 (139)
Q Consensus        82 i~~al~~-~g~~~p~l~C~~----~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~p  138 (139)
                      |++||++ +| ..|.|+|..    ..+|.||+||||+++.++|+||.... .++|++.|.||
T Consensus       147 I~~Ai~~~~g-~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~C~~~~~-~~~C~~~i~~p  206 (217)
T 1vcz_A          147 IKKAIEEGVG-HSPYIECNVDTQGNHQIYQVYLCVDKTATDFIDCPIFPH-GRGCGSKIEFP  206 (217)
T ss_dssp             HHHHHHHHHS-SCCEEEEEECTTSCEEEEEEEEEEETTSSSEECCSSCCC-CCCCCSEEEEC
T ss_pred             HHHHHHHHHC-CCeEEEEeecCCCCeEEEEEEEEecCCCCeeeeCCCCCC-CCCCCCCeEEc
Confidence            9999999 98 899999974    36899999999999779999996332 14799999887

>1ucd_A Ribonuclease MC; alpha plus beta, hydrolase; HET: U5P; 1.30A {Momordica charantia} SCOP: d.124.1.1 PDB: 1bk7_A* 1ucc_A* 1uca_A* 1v9h_A* 1j1f_A* 1ucg_A 1j1g_A*

Probab=100.00  E-value=1.5e-39  Score=243.28  Aligned_cols=126  Identities=22%  Similarity=0.569  Sum_probs=112.5

Q ss_pred             chhHHHHHhccCCCCccCCCCChhhHHHhhhccccc-CCCCChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCHHHH
Q 047133            4 NKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRG-QPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRKY   82 (139)
Q Consensus         4 ~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~-~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~~~i   82 (139)
                      +.++++.|+.+||++.  .+++..||+|||+||||| ...++|.+||++|++|++++|++++|+++||+|+++.|++++|
T Consensus        58 ~~~l~~~L~~~Wp~l~--~~~~~~fW~hEw~KHGTC~~~~~~~~~YF~~a~~l~~~~~~~~~L~~~~I~P~~~~~t~~~I  135 (190)
T 1ucd_A           58 ISHLQSQLNTLWPNVL--RANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAAGPNGRTKSRQAI  135 (190)
T ss_dssp             GGGGHHHHHHHSCCSS--SSCHHHHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHTCCHHHHHGGGTCSCSSSEEEHHHH
T ss_pred             cchhhHHHHhcCCCcC--CCCCCchHHhccccCcEeCCCCCCHHHHHHHHHHHHHHcCHHHHHHHCCCCCCCceEeHHHH
Confidence            4679999999999995  346689999999999995 4457999999999999999999999999999997566999999


Q ss_pred             HHHHHH-hCCCCcEEEecc-----CCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceee
Q 047133           83 TRAINT-RYGTTPLYKCLN-----TSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIW  137 (139)
Q Consensus        83 ~~al~~-~g~~~p~l~C~~-----~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~  137 (139)
                      ++||++ +| +.|.|+|..     ..+|.||++|||+++.++|+||.     .+|+++|+|
T Consensus       136 ~~ai~~~~g-~~p~l~C~~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~-----~~C~~~~~f  190 (190)
T 1ucd_A          136 KGFLKAKFG-KFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDCTR-----DTCGANFIF  190 (190)
T ss_dssp             HHHHHHHHS-SCCEEEEEECTTTCCEEEEEEEEEEETTSSSEECCCC-----CCCCSEEEC
T ss_pred             HHHHHHHHC-CCeEEEeccCCCCCCcEEEEEEEEecCCCCeeccCCC-----CCCCCCCCC
Confidence            999999 98 899999984     26999999999999669999987     369998776

>1sgl_A Trichomaglin; S-like ribonuclease, X-RAY sequence, MASS SPEC analysis, hydrolase; 2.20A {Trichosanthes lepiniana} SCOP: d.124.1.1

Probab=100.00  E-value=2e-39  Score=245.75  Aligned_cols=130  Identities=22%  Similarity=0.526  Sum_probs=114.8

Q ss_pred             cchhHHHHHhccCCCCccC-----CCCChhhHHHhhhcccc-cCCCC-ChHHHHHHHHHHHHhcCHHHHHHhCCCCC-CC
Q 047133            3 SNKSFAAEMNKFWPSLTRD-----ENENEQFWEREWKHHGR-GQPTL-PPEEYFRTAITLVKAANLEAAFRGAGINP-DG   74 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~-----~~~~~~fw~hEW~KHGt-~~~~~-~~~~YF~~al~l~~~~~i~~~L~~~gI~P-~~   74 (139)
                      .+.+|+++|+.+||+|.++     .+++..||+|||+|||| |...+ +|.+||++|++|++++|++++|+++||+| ++
T Consensus        67 ~~~~l~~~L~~~Wp~l~~~~~~~~~~~~~~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~L~~~~~l~~~L~~~gI~P~~g  146 (209)
T 1sgl_A           67 EIMPFFGKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASNS  146 (209)
T ss_dssp             GGGGGHHHHHHHSCBSCSSCEECGGGCEECHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHTCHHHHHHHHTCCCCSS
T ss_pred             hhhhHHHHHHccCcCcccccccccCCCcchHHHHhhhcCccccccccccHHHHHHHHHHHHHHcChHHHHHHCCCcCCCC
Confidence            4567999999999999532     24567899999999999 55556 99999999999999999999999999999 57


Q ss_pred             CCCCHHHHHHHHHH-hCCCCcEEEeccCCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceeec
Q 047133           75 DKLNPRKYTRAINT-RYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWA  138 (139)
Q Consensus        75 ~~y~~~~i~~al~~-~g~~~p~l~C~~~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~p  138 (139)
                      ..|++++|++||++ +| +.|.|+|.+.++|.||++|||+++ ++|+|+.    ..+||+.|.||
T Consensus       147 ~~yt~~~I~~Ai~~~~g-~~p~l~C~~~~~L~Ev~iC~~~~~-~~i~C~~----~~~C~~~i~~p  205 (209)
T 1sgl_A          147 KMYDLKDIVVAVESAVG-ARPKLRCDEEGLVQKLSLCFDKDF-KPRDCVQ----VGSCPRYVSLP  205 (209)
T ss_dssp             CEEEHHHHHHHHHHHHS-SCCEEEECTTSBEEEEEEEEETTC-CEECCCC----CCCSCSEEECC
T ss_pred             ccccHHHHHHHHHHHhC-CCeEEEECCCCeEEEEEEEeCCCc-cEeCCCC----CCCCCCCeEeC
Confidence            88999999999999 98 899999986469999999999997 8999952    35799999997

>1jy5_A CALSEPRRP; RNAse, alpha-beta protein, hydrolase; 2.05A {Calystegia sepium} SCOP: d.124.1.1

Probab=100.00  E-value=2.2e-39  Score=245.97  Aligned_cols=131  Identities=23%  Similarity=0.468  Sum_probs=114.7

Q ss_pred             cchhHHHHHhccCCCCccCCCC-----ChhhHHHhhhcccccC-CC-CChHHHHHHHHHHHHhcCHHHHHHhCCCCC-CC
Q 047133            3 SNKSFAAEMNKFWPSLTRDENE-----NEQFWEREWKHHGRGQ-PT-LPPEEYFRTAITLVKAANLEAAFRGAGINP-DG   74 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~~~~-----~~~fw~hEW~KHGt~~-~~-~~~~~YF~~al~l~~~~~i~~~L~~~gI~P-~~   74 (139)
                      .+.+|++.|+++||++..+...     +..||+|||+|||||. .. .+|.+||++|++|++++|++++|+++||+| ++
T Consensus        67 ~i~~l~~~L~~~WP~l~~~~~~~~~~~~~~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~nl~~~L~~~gI~Ps~g  146 (212)
T 1jy5_A           67 EISILSNDLSKYWPSYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSNT  146 (212)
T ss_dssp             GGGGGHHHHHHHSCBCCSSCEEETTEEESSHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHSCHHHHHHTTTCCCCSS
T ss_pred             hhHHHHHHHHhhCCcccccccccccccchhHHHHhhhhCceeCcccccCHHHHHHHHHHHHHhcCHHHHHHHcCCcCCCC
Confidence            4678999999999999643322     2389999999999954 43 399999999999999999999999999999 68


Q ss_pred             CCCCHHHHHHHHHH-hCCCCcEEEeccCCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceeecC
Q 047133           75 DKLNPRKYTRAINT-RYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWAL  139 (139)
Q Consensus        75 ~~y~~~~i~~al~~-~g~~~p~l~C~~~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~p~  139 (139)
                      ..|++++|++||++ +| +.|.|+|.+ +.|.||++|||+++ ++|+||.   ...+|++.|.||.
T Consensus       147 ~~yt~~~I~~Ai~~~~g-~~p~l~C~~-~~l~ev~lC~~~~~-~~i~C~~---~~~~C~~~i~~p~  206 (212)
T 1jy5_A          147 AEYKVEGIMSAIQSALR-VTPVVKCKS-DAVEQVQICFDKTL-QLQECPS---TASTCPSLVSLPI  206 (212)
T ss_dssp             CCEEHHHHHHHHHHHHS-SCCEEEEET-TEEEEEEEEECTTS-CEECCCC---CCCCSCSEEBCCC
T ss_pred             ceEcHHHHHHHHHHhhC-CCEEEEeCC-CCcceEEEEEcCCC-cEecCCC---CCCCCCCCEEeCC
Confidence            89999999999999 98 899999998 89999999999997 8999993   2357999999983

>1iqq_A S3-RNAse; japanese PEAR, SELF-incompatibilit family ribonuclease, hydrolase; HET: NAG BMA MAN; 1.50A {Pyrus pyrifolia} SCOP: d.124.1.1

Probab=100.00  E-value=6.2e-39  Score=241.48  Aligned_cols=134  Identities=32%  Similarity=0.639  Sum_probs=115.7

Q ss_pred             cchhHHHHHhccCCCCccCCCCChhhHHHhhhcccccC-C-CCChHHHHHHHHHHH--HhcCHHHHHHhCCCCCCCCCCC
Q 047133            3 SNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQ-P-TLPPEEYFRTAITLV--KAANLEAAFRGAGINPDGDKLN   78 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~-~-~~~~~~YF~~al~l~--~~~~i~~~L~~~gI~P~~~~y~   78 (139)
                      .+.+|+++|+.+||++. ..+++..||+|||+|||||. + .++|.+||++|++|+  +++|++++|+++||+|++..|+
T Consensus        56 ~~~~l~~~L~~~Wp~~~-~~~~~~~fW~hEw~KHGTC~~~~~~~~~~YF~~a~~l~~~~k~n~~~~L~~~~I~P~~~~~t  134 (200)
T 1iqq_A           56 REKLLEHQLEIIWPNVF-DRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGKKRA  134 (200)
T ss_dssp             CCHHHHHHHHHHSCCSS-CGGGHHHHHHHHHHHTGGGSTTTSCSHHHHHHHHHHHHTTTCCCHHHHHHHTTCCSSCCEEC
T ss_pred             cchhhhhhhhccCCCcc-cCCCCChHHHhhhhCCcCcCCcccCCHHHHHHHHHHHHhhcccCHHHHHHHcCCccCCCeec
Confidence            35789999999999995 24567899999999999954 5 479999999999999  6799999999999999767799


Q ss_pred             HHHHHHHHHH-hCCCCcEEEecc---CCcEEEEEEeeecCCCceeeCCCC--CCCCCCCCCc-eee
Q 047133           79 PRKYTRAINT-RYGTTPLYKCLN---TSLLMEVTLCVDAKARNFVSCIAR--PSSLSSCPGD-IIW  137 (139)
Q Consensus        79 ~~~i~~al~~-~g~~~p~l~C~~---~~~L~Ev~~C~~~~~~~~i~Cp~~--~~~~~~C~~~-i~~  137 (139)
                      +++|++||++ ++|..|.|+|..   ..+|.||+||||+++.++|+||.+  .+..++||+. |.|
T Consensus       135 ~~~I~~Ai~~~~~g~~p~l~C~~~~~~~~L~Ev~iC~~~~~~~~i~C~~~~~~~~~~~Cp~~~i~y  200 (200)
T 1iqq_A          135 LLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGEHFIDCPHPFEPISPHYCPTNNIKY  200 (200)
T ss_dssp             HHHHHHHHHTTTTTCCCEEEEEEETTEEEEEEEEEEECTTSSSEECCSCCCCTTSTTCCCSSCEEC
T ss_pred             HHHHHHHHHHhcCCCceEEEEeeCCCCeEEEEEEEEEECCCCeEEeCCCCCCCCCCCCCCccCcCC
Confidence            9999999999 833899999984   268999999999998789999873  4456789984 876

>1ioo_A SF11-RNAse; SELF-incompatibility ribonuclease, hydrolase; HET: NAG BMA MAN; 1.55A {Nicotiana alata} SCOP: d.124.1.1

Probab=100.00  E-value=7.6e-39  Score=240.32  Aligned_cols=128  Identities=22%  Similarity=0.459  Sum_probs=110.5

Q ss_pred             hHHHHHhccCCCCccCC---CCChhhHHHhhhccccc-CCCCChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCHHH
Q 047133            6 SFAAEMNKFWPSLTRDE---NENEQFWEREWKHHGRG-QPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPRK   81 (139)
Q Consensus         6 ~l~~~L~~~Wp~l~~~~---~~~~~fw~hEW~KHGt~-~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~~~   81 (139)
                      +++++|+++||++..+.   .++..||+|||+||||| ...++|.+||++|++|++++|++++|+++||+| +..|++++
T Consensus        58 ~l~~~L~~~Wp~l~~~~~~~~~~~~fW~hEw~KHGTC~~~~~~q~~YF~~a~~L~~~~n~~~~L~~~gI~P-~~~~t~~~  136 (196)
T 1ioo_A           58 KMLNDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIP-GSSYTFQD  136 (196)
T ss_dssp             HHHHHHHHHTCCTTSCHHHHHHHCHHHHHHHHHTGGGCTTTCCHHHHHHHHHHHHHTCCHHHHHHHTTCCT-TEEECHHH
T ss_pred             HHHHHHhccCCCCCcccccccccchHHHhhCcCCcCcCCCcCCHHHHHHHHHHHHHHCCHHHHHHHCCCcc-CCCcCHHH
Confidence            79999999999995221   13478999999999995 555699999999999999999999999999999 55699999


Q ss_pred             HHHHHHH-hCCCCcEEEecc----CCcEEEEEEeeecCCCceeeCCCCCCCCCCC--CCceeecC
Q 047133           82 YTRAINT-RYGTTPLYKCLN----TSLLMEVTLCVDAKARNFVSCIARPSSLSSC--PGDIIWAL  139 (139)
Q Consensus        82 i~~al~~-~g~~~p~l~C~~----~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C--~~~i~~p~  139 (139)
                      |++||++ +| ..|.|+|..    ..+|.||++|||+++.++|+||.+    .+|  +..|.||.
T Consensus       137 I~~Ai~~~~g-~~p~l~C~~~~~~~~~L~Ev~iC~~~~~~~~i~Cp~~----~~C~~~~~i~fp~  196 (196)
T 1ioo_A          137 IFDAIKTVSQ-ENPDIKCAEVTKGTPELYEIGICFTPNADSMFRCPQS----DTCDKTAKVLFRR  196 (196)
T ss_dssp             HHHHHHHHHS-SCCEEEEECSSTTCCEEEEEEEEECTTSSSEECCCCC----CCSCTTSCEEECC
T ss_pred             HHHHHHHHhC-CCeEEEeeecCCCCeEEEEEEEEEeCCCCEEeCCcCC----CCCCCCCCeecCC
Confidence            9999999 98 899999953    369999999999999779999962    469  34599984

>3t0o_A Ribonuclease T2, ribonuclease 6; rnaset2, alpha/beta fold, RNA cleavage, hydrol; HET: NAG; 1.59A {Homo sapiens}

Probab=100.00  E-value=2.4e-38  Score=243.94  Aligned_cols=136  Identities=21%  Similarity=0.529  Sum_probs=114.4

Q ss_pred             CcchhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCC----CChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCC
Q 047133            2 ESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPT----LPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKL   77 (139)
Q Consensus         2 ~~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~----~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y   77 (139)
                      ..+++|+++|+++||++..+.+++..||+|||+|||||...    .+|.+||++|++|++++|+.++|+++||+|++..|
T Consensus        60 ~~i~~l~~~L~~~WPdl~~~~~~~~~fW~hEW~KHGTC~~~~~~~~~q~~YF~~a~~L~~~~n~~~~L~~~gI~P~~~~y  139 (238)
T 3t0o_A           60 EEIKDLLPEMRAYWPDVIHSFPNRSRFWKHEWEKHGTCAAQVDALNSQKKYFGRSLELYRELDLNSVLLKLGIKPSINYY  139 (238)
T ss_dssp             GGGGGGHHHHHHHSCCCSSCCSSTHHHHHHHCCCCCHHHTTSGGGCSHHHHHHHHHHHHHHHCHHHHHHHTTCCCCSSCE
T ss_pred             hhhhHHHHHHHhhCcccccCCCCchHHHHHhhhcCceecCCccccccHHHHHHHHHHHHHHcccHHHHHhcCccCCCCcc
Confidence            35778999999999999655567789999999999995432    38999999999999999999999999999955578


Q ss_pred             CHHHHHHHHHH-hCCCCcEEEecc------CCcEEEEEEeeecCCCceeeCCCCC------------------CCCCCCC
Q 047133           78 NPRKYTRAINT-RYGTTPLYKCLN------TSLLMEVTLCVDAKARNFVSCIARP------------------SSLSSCP  132 (139)
Q Consensus        78 ~~~~i~~al~~-~g~~~p~l~C~~------~~~L~Ev~~C~~~~~~~~i~Cp~~~------------------~~~~~C~  132 (139)
                      ++++|++||++ +| +.|.|+|.+      .++|.||+||||+++.++|+||.++                  .+...|.
T Consensus       140 t~~~I~~Ai~~~~g-~~P~l~C~~~~~~~~~~~L~EV~iC~d~~~~~~idCp~~~~~~~~~~~~~~~~~~~~~~~~~~c~  218 (238)
T 3t0o_A          140 QVADFKDALARVYG-VIPKIQCLPPSQDEEVQTIGQIELCLTKQDQQLQNCTEPGEQPSPKQEVWLANGAAESRGLRVCE  218 (238)
T ss_dssp             EHHHHHHHHHHHHS-SCCEEEEECCC---CCCEEEEEEEEEETTTCCEECCC--------------------CTTCEECC
T ss_pred             cHHHHHHHHHHHHC-CCeEEEEecCCCCCcccEEEEEEEEeecCCCEEecCCCCCCCCccccccccccccccCCceeecC
Confidence            99999999999 99 899999975      1479999999999766999999843                  1246787


Q ss_pred             Cc-eeec
Q 047133          133 GD-IIWA  138 (139)
Q Consensus       133 ~~-i~~p  138 (139)
                      ++ |+||
T Consensus       219 ~~~~~~~  225 (238)
T 3t0o_A          219 DGPVFYP  225 (238)
T ss_dssp             SSEEBCC
T ss_pred             CCCccCC
Confidence            76 7775

>1bol_A Protein (ribonuclease RH); ribonucleases, hydrolase; 2.00A {Rhizopus niveus} SCOP: d.124.1.1

Probab=100.00  E-value=3.6e-38  Score=241.04  Aligned_cols=126  Identities=29%  Similarity=0.520  Sum_probs=111.6

Q ss_pred             hhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCC------------CChHHHHHHHHHHHHhcCHHHHHHhCCCCC
Q 047133            5 KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPT------------LPPEEYFRTAITLVKAANLEAAFRGAGINP   72 (139)
Q Consensus         5 ~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~------------~~~~~YF~~al~l~~~~~i~~~L~~~gI~P   72 (139)
                      .+|+++|+.+||++.   +++..||+|||+|||||...            .++.+||++|++|++++|+.++|+++||+|
T Consensus        81 ~~l~~~L~~~WP~l~---~~~~~fW~hEW~KHGTC~~~~~~~c~~~y~~~~~~~~YF~~al~L~~~~n~~~~L~~~gI~P  157 (222)
T 1bol_A           81 SSLYNSMLTYWPSNQ---GNNNVFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGITP  157 (222)
T ss_dssp             HHHHHHHHHHSCCTT---SCHHHHHHHHHHHTGGGCGGGSGGGCTTCCTTHHHHHHHHHHHHHHHHSCHHHHHHTTTCCS
T ss_pred             hHHHHHHhhcCCCcc---ccccHHHHhhhhcCeeeccccCccccccccccccHHHHHHHHHHHHHHcCcHHHHHHcCCCC
Confidence            578999999999993   56789999999999996421            267899999999999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHH-hCCCCcEEEeccCCcEEEEEEeeecCC-CceeeCCCCCCCCCCCCCceeec
Q 047133           73 DGDKLNPRKYTRAINT-RYGTTPLYKCLNTSLLMEVTLCVDAKA-RNFVSCIARPSSLSSCPGDIIWA  138 (139)
Q Consensus        73 ~~~~y~~~~i~~al~~-~g~~~p~l~C~~~~~L~Ev~~C~~~~~-~~~i~Cp~~~~~~~~C~~~i~~p  138 (139)
                       +..|++++|++||++ +| ..|.|+|.+ ++|.||++||++++ .++++|+...  ..+||++|.||
T Consensus       158 -~~~yt~~~I~~Ai~~~~g-~~p~l~C~~-~~L~Ev~ic~~~~g~~~~~~~~~~~--~~~C~~~i~~p  220 (222)
T 1bol_A          158 -GGTYTATEMQSAIESYFG-AKAKIDCSS-GTLSDVALYFYVRGRDTYVITDALS--TGSCSGDVEYP  220 (222)
T ss_dssp             -SEEEEHHHHHHHHHHHHS-SCCEEEEET-TEEEEEEEEEEEETTTEEEEECCSC--CCSCCSEEEEC
T ss_pred             -CCcCcHHHHHHHHHHHhC-CCeEEEECC-CEEeEEEEEEEcCCCCCeEECCCCC--CCCCCCCeEeC
Confidence             445999999999999 98 899999997 89999999999984 5899998752  46799999997

>3d3z_A Actibind; RNAse, hydrolase; HET: NAG D3Z; 1.70A {Aspergillus niger}

Probab=100.00  E-value=2e-37  Score=240.24  Aligned_cols=131  Identities=24%  Similarity=0.505  Sum_probs=112.1

Q ss_pred             chhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCC------------CChHHHHHHHHHHHHhcCHHHHHHhCCCC
Q 047133            4 NKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPT------------LPPEEYFRTAITLVKAANLEAAFRGAGIN   71 (139)
Q Consensus         4 ~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~------------~~~~~YF~~al~l~~~~~i~~~L~~~gI~   71 (139)
                      ..+|++.|+++||+|. ...++..||+|||+|||||...            .++.+||++|++|++++|+.++|+++||+
T Consensus        84 ~~~ll~~L~~~Wp~l~-~~~~~~~fW~hEW~KHGTC~~~~~~~C~~~y~~~~~~~~YF~~al~L~~k~n~~~~L~~~gI~  162 (247)
T 3d3z_A           84 RTELLSYMKEYWPDYE-GADEDESFWEHEWNKHGTCINTIEPSCYTDYYAQEEVGDFFQQVVDLFKTLDSYTALSDAGIT  162 (247)
T ss_dssp             CHHHHHHHHHHSCCTT-CGGGHHHHHHHHHHHTGGGCGGGSGGGBSSCCTTHHHHHHHHHHHHHHTTCCHHHHHHHTTCC
T ss_pred             hHHHHHHHHhhCcccc-CCCCccHHHHHhhhcCeeecccCCcccccccccccCHHHHHHHHHHHHHhcCcHHHHHHCCcc
Confidence            3578999999999994 2226789999999999996421            36789999999999999999999999999


Q ss_pred             C-CCCCCCHHHHHHHHHH-hCCCCcEEEeccCCcEEEEEEeeecCCC----ceeeCCCCCCCCCCCCCc-eeec
Q 047133           72 P-DGDKLNPRKYTRAINT-RYGTTPLYKCLNTSLLMEVTLCVDAKAR----NFVSCIARPSSLSSCPGD-IIWA  138 (139)
Q Consensus        72 P-~~~~y~~~~i~~al~~-~g~~~p~l~C~~~~~L~Ev~~C~~~~~~----~~i~Cp~~~~~~~~C~~~-i~~p  138 (139)
                      | .++.|++++|++||++ ++|..|.|+|.+ ++|.||++|||+++.    ++++|+...  ..+||++ |.||
T Consensus       163 P~~~~tyt~~~I~~Ai~~~~~g~~p~l~C~~-~~L~Ev~iC~~~~~~~~~~~~~~~~~~~--~~~C~~~~I~~p  233 (247)
T 3d3z_A          163 PSEDATYKLSDIEDALAAIHDGYPPYVGCED-GALSQLYYYFNVKGSAIGGTYVASERLE--DSNCKDSGIKYP  233 (247)
T ss_dssp             CCSSCCBCHHHHHHHHHTTTTTCCCEEEEET-TEEEEEEEEEEEESCTTTSEEEECCCSS--CBSSCSSCBBCC
T ss_pred             CCCCceECHHHHHHHHHHhcCCCCeEEEeCC-CEEEEEEEEEecCCCccCCceeECCCCC--CCCCCCCceEeC
Confidence            9 4578999999999999 833899999997 999999999999872    588888643  4679987 9987

>2pqx_A Ribonuclease I; hydrolase; HET: MES; 1.42A {Escherichia coli} PDB: 2ea1_A* 2pqy_A* 2z70_A*

Probab=99.97  E-value=3.5e-32  Score=210.43  Aligned_cols=120  Identities=18%  Similarity=0.308  Sum_probs=102.3

Q ss_pred             hhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCCCChHHHHHHHHHHHHhcCHH---HHHHhCCCCCCCCCCCHHH
Q 047133            5 KSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITLVKAANLE---AAFRGAGINPDGDKLNPRK   81 (139)
Q Consensus         5 ~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~~~~~~YF~~al~l~~~~~i~---~~L~~~gI~P~~~~y~~~~   81 (139)
                      .+++++|+.+||++..    +..||+|||+|||||.. ++|.+||++|++|++++|++   ++|+.   .| +++|++++
T Consensus       106 ~~l~~~L~~~WP~~~~----~~~fw~hEW~KHGTC~~-~~~~~YF~~a~~l~~~~n~~~~~~~l~~---~~-g~~~t~~~  176 (245)
T 2pqx_A          106 LETAAKLSEVMPGAGG----RSCLERYEYAKHGACFG-FDPDAYFGTMVRLNQEIKESEAGKFLAD---NY-GKTVSRRD  176 (245)
T ss_dssp             HHHHHHHHHHCTTSST----TTCHHHHHHHHHTGGGT-CCHHHHHHHHHHHHHHHHHSHHHHHHHH---TT-TSEEEHHH
T ss_pred             HHHHHHHHHhCCCCCC----cchHHHHHhhhCCeecC-CCHHHHHHHHHHHHHHhccchHHHHhhc---CC-CceEcHHH
Confidence            5789999999999942    26799999999999654 89999999999999999765   56877   34 78899999


Q ss_pred             HHHHHHH-hCCCCc----EEEecc-CCcEEEEEEeeecC-------CCceeeCCCCCCCCCCCCCceeec
Q 047133           82 YTRAINT-RYGTTP----LYKCLN-TSLLMEVTLCVDAK-------ARNFVSCIARPSSLSSCPGDIIWA  138 (139)
Q Consensus        82 i~~al~~-~g~~~p----~l~C~~-~~~L~Ev~~C~~~~-------~~~~i~Cp~~~~~~~~C~~~i~~p  138 (139)
                      |++||++ +| ..|    .|+|.+ ..+|.||+||||++       +.++|+||.    ..+||++|+||
T Consensus       177 I~~Ai~~~~g-~~p~~~v~l~C~~~~~~L~Ev~iC~~~~~~~~~~~~~~~i~cp~----~~~C~~~~~~~  241 (245)
T 2pqx_A          177 FDAAFAKSWG-KENVKAVKLTCQGNPAYLTEIQISIKADAINAPLSANSFLPQPH----PGNCGKTFVID  241 (245)
T ss_dssp             HHHHHHHHHC-GGGGGGEEEEEETTTTEEEEEEEEEEGGGTTSCCCTTSBCCCSC----CBSCCSEEECC
T ss_pred             HHHHHHHHhC-CCCCcceEEEECCCCCEEEEEEEEEcccccCCCccccccccCCC----CCCCCCCeEeC
Confidence            9999999 98 665    999987 24999999999999       568999985    24699998886

>4dvk_A E(RNS) glycoprotein; T2 ribonuclease, virus envelope glycoprotein, viral protein; HET: NAG BMA MAN; 2.21A {Bovine viral diarrhea virus} PDB: 4dw5_A* 4dvl_A* 4dvn_A* 4dw3_A* 4dw4_A* 4dwc_A* 4dwa_A* 4dw7_A*

Probab=99.17  E-value=1.9e-12  Score=93.78  Aligned_cols=45  Identities=16%  Similarity=0.184  Sum_probs=35.2

Q ss_pred             cchhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCCCCChHHHHHHHHHH
Q 047133            3 SNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPPEEYFRTAITL   55 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~~~~~~~YF~~al~l   55 (139)
                      .+.+|++.|++  |+|..   +  .||+|||+|||||. .++|.+||.++...
T Consensus        53 ~I~dLl~~Ldk--PdL~~---~--~FWeHEWnKHGTCS-~ynQe~YFdL~~~a   97 (165)
T 4dvk_A           53 AIHGMMDASEK--TNYTC---C--RLQRHEWNKHGWCN-WYNIEPWILLMNKT   97 (165)
T ss_dssp             TSTTCCCSCGG--GTSCS---S--HHHHHHHHHHTHHH-HSSHHHHHHHHHHH
T ss_pred             hHHHHHHhhcC--CCCCc---h--HHHHHHHHcCCccC-CCCHHHHHHHHHHH
Confidence            35567788888  99942   2  29999999999943 28999999988765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	139
d1ucda_	190	d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Mom	2e-21
d1iyba_	208	d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxI	8e-21
d1iqqa_	200	d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyri	2e-18
d1jy5a_	207	d.124.1.1 (A:) RNase-related protein {Hedge bindwe	6e-18
d1sgla_	206	d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes	2e-17
d1iooa_	196	d.124.1.1 (A:) Gemetophytic self-incompatibility a	2e-16
d1bola_	222	d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [T	3e-15

>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica charantia) [TaxId: 3673]} Length = 190

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease MC1
species: Bitter gourd (Momordica charantia) [TaxId: 3673]

 Score = 83.2 bits (205), Expect = 2e-21
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 13/134 (9%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAANLEAAFRG 67
           +++N  WP++ R    N+QFW  EW  HG   + T     YF+ A+ +    ++  A R 
Sbjct: 63  SQLNTLWPNVLR--ANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRP 120

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKCL-----NTSLLMEVTLCVDAKARNFVSCI 122
               P+G   + +     +  ++G  P  +C        S L++V  C        + C 
Sbjct: 121 HAAGPNGRTKSRQAIKGFLKAKFGKFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDC- 179

Query: 123 ARPSSLSSCPGDII 136
               +  +C  + I
Sbjct: 180 ----TRDTCGANFI 189

>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId: 35889]} Length = 208

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase NW
species: Nicotiana glutinosa [TaxId: 35889]

 Score = 81.7 bits (201), Expect = 8e-21
 Identities = 38/133 (28%), Positives = 54/133 (40%), Gaps = 7/133 (5%)

Query: 9   AEMNKFWPSLTRDENENEQFWEREWKHHGRG-QPTLPPEEYFRTAITLVKAANLEAAFRG 67
           + M + WP+L         FW  EW+ HG   +       YF+ A+ L    NL    +G
Sbjct: 74  SRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQG 133

Query: 68  AGINPDGDKLNPRKYTRAINTRYGTTPLYKCLN----TSLLMEVTLCVDAKARNFVSCIA 123
           AGI+PDG   +      AI +  G  P  +C       S L ++ +CVD    N + C  
Sbjct: 134 AGIHPDGGFYSLNSIKNAIRSAIGYAPGIECNVDESGNSQLYQIYICVDGSGSNLIECPI 193

Query: 124 RPSSLSSCPGDII 136
            P     C   I 
Sbjct: 194 FPR--GKCGSSIE 204

>d1iqqa_ d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId: 3767]} Length = 200

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: S3-RNase
species: Japanese pear (Pyrus pyrifolia) [TaxId: 3767]

 Score = 75.6 bits (185), Expect = 2e-18
 Identities = 42/145 (28%), Positives = 57/145 (39%), Gaps = 11/145 (7%)

Query: 3   SNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGR--GQPTLPPEEYFRTAITL--VKA 58
             K    ++   WP++  D  +N  FW++EW  HG            YF T I +   K 
Sbjct: 56  REKLLEHQLEIIWPNVF-DRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKK 114

Query: 59  ANLEAAFRGAGINPDGDKLNPRKYTRAINTR-YGTTPLYKCL---NTSLLMEVTLCVDAK 114
            N+      A I PDG K        AI        P  KC     T+ L+E+TLC D  
Sbjct: 115 QNVSRILSKAKIEPDGKKRALLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKS 174

Query: 115 ARNFVSCI--ARPSSLSSCPGDIIW 137
             +F+ C     P S   CP + I 
Sbjct: 175 GEHFIDCPHPFEPISPHYCPTNNIK 199

>d1jy5a_ d.124.1.1 (A:) RNase-related protein {Hedge bindweed (Calystegia sepium) [TaxId: 47519]} Length = 207

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase-related protein
species: Hedge bindweed (Calystegia sepium) [TaxId: 47519]

 Score = 74.1 bits (181), Expect = 6e-18
 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 13/136 (9%)

Query: 9   AEMNKFWPSLTRDENE-----NEQFWEREWKHHGR--GQPTLPPEEYFRTAITLVKAANL 61
            +++K+WPS +   +      +      EW  HG           EYF T + L    N+
Sbjct: 72  NDLSKYWPSYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNI 131

Query: 62  EAAFRGAGINPDGDK-LNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVS 120
                 +G  P             AI +    TP+ KC  +  + +V +C D K      
Sbjct: 132 SEILSESGYLPSNTAEYKVEGIMSAIQSALRVTPVVKC-KSDAVEQVQICFD-KTLQLQE 189

Query: 121 CIARPSSLSSCPGDII 136
           C   PS+ S+CP  + 
Sbjct: 190 C---PSTASTCPSLVS 202

>d1sgla_ d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes lepiniana) [TaxId: 282652]} Length = 206

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Trichomaglin
species: Gourd (Trichosanthes lepiniana) [TaxId: 282652]

 Score = 72.9 bits (178), Expect = 2e-17
 Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 13/135 (9%)

Query: 9   AEMNKFWPSLTRDENE-----NEQFWEREWKHHGR--GQPTLPPEEYFRTAITLVKAANL 61
            ++ ++WP+      +      E  W ++++ HG            YF+  + L    N+
Sbjct: 70  GKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNV 129

Query: 62  EAAFRGAGINPDGDKLNPRK-YTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARNFVS 120
           + A   AGI     K+   K    A+ +  G  P  +C    L+ +++LC D K      
Sbjct: 130 DKALEDAGIVASNSKMYDLKDIVVAVESAVGARPKLRCDEEGLVQKLSLCFD-KDFKPRD 188

Query: 121 CIARPSSLSSCPGDI 135
           C+     + SCP  +
Sbjct: 189 CV----QVGSCPRYV 199

>d1iooa_ d.124.1.1 (A:) Gemetophytic self-incompatibility associated SF11-RNase {Winged tobacco (Nicotiana alata) [TaxId: 4087]} Length = 196

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Gemetophytic self-incompatibility associated SF11-RNase
species: Winged tobacco (Nicotiana alata) [TaxId: 4087]

 Score = 70.1 bits (171), Expect = 2e-16
 Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 11/140 (7%)

Query: 4   NKSFAAEMNKFWPSLTRDENE---NEQFWEREWKHHGR-GQPTLPPEEYFRTAITLVKAA 59
                 +++K W  L  +++     +  W+ ++  HG   Q       YF  A+ L    
Sbjct: 56  TGKMLNDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKF 115

Query: 60  NLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCL----NTSLLMEVTLCVDAKA 115
           +L    +   I P G     +    AI T     P  KC      T  L E+ +C    A
Sbjct: 116 DLLRTLQTHRIIP-GSSYTFQDIFDAIKTVSQENPDIKCAEVTKGTPELYEIGICFTPNA 174

Query: 116 RNFVSCIARPSSLSSCPGDI 135
            +   C  +  +       +
Sbjct: 175 DSMFRC-PQSDT-CDKTAKV 192

>d1bola_ d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]} Length = 222

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease Rh
species: Rhizopus niveus [TaxId: 4844]

 Score = 67.2 bits (163), Expect = 3e-15
 Identities = 37/140 (26%), Positives = 54/140 (38%), Gaps = 18/140 (12%)

Query: 10  EMNKFWPSLTRDENENEQFWEREWKHHGRGQPTLPP------------EEYFRTAITLVK 57
            M  +WPS   +   N  FW  EW  HG    T  P             +YF+ A+ L  
Sbjct: 86  SMLTYWPSNQGN---NNVFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRS 142

Query: 58  AANLEAAFRGAGINPDGDKLNPRKYTRAINTRYGTTPLYKCLNTSLLMEVTLCVDAKARN 117
             N+  AF   GI P G      +   AI + +G      C ++  L +V L    + R+
Sbjct: 143 QYNVYKAFSSNGITP-GGTYTATEMQSAIESYFGAKAKIDC-SSGTLSDVALYFYVRGRD 200

Query: 118 FVSCIARPSSLSSCPGDIIW 137
                   S+  SC GD+ +
Sbjct: 201 TYVITDALST-GSCSGDVEY 219

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	139
d1iyba_	208	RNase NW {Nicotiana glutinosa [TaxId: 35889]}	100.0
d1ucda_	190	Ribonuclease MC1 {Bitter gourd (Momordica charanti	100.0
d1sgla_	206	Trichomaglin {Gourd (Trichosanthes lepiniana) [Tax	100.0
d1jy5a_	207	RNase-related protein {Hedge bindweed (Calystegia	100.0
d1iooa_	196	Gemetophytic self-incompatibility associated SF11-	100.0
d1iqqa_	200	S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId:	100.0
d1bola_	222	Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]}	100.0
d2ciwa1	120	Cloroperoxidase {Fungus (Caldariomyces fumago) [Ta	87.0

>d1iyba_ d.124.1.1 (A:) RNase NW {Nicotiana glutinosa [TaxId: 35889]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase NW
species: Nicotiana glutinosa [TaxId: 35889]

Probab=100.00  E-value=3.9e-40  Score=247.66  Aligned_cols=134  Identities=28%  Similarity=0.567  Sum_probs=120.1

Q ss_pred             CcchhHHHHHhccCCCCccCCCCChhhHHHhhhcccccC-CCCChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCHH
Q 047133            2 ESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQ-PTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPR   80 (139)
Q Consensus         2 ~~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~-~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~~   80 (139)
                      ..+++|+++|+.+||++..+.+++..||+|||+|||||. ..+++.+||++|++|++++|++++|+++||+|++..|+++
T Consensus        67 ~~~~~l~~~l~~~Wp~l~~~~~~~~~~w~hEW~KHGtC~~~~~~~~~YF~~al~L~~~~n~~~~L~~~~i~p~~~~y~~~  146 (208)
T d1iyba_          67 SQVSDLISRMQQNWPTLACPSGTGSAFWSHEWEKHGTCAENVFDQHGYFKKALDLKNQINLLEILQGAGIHPDGGFYSLN  146 (208)
T ss_dssp             GGGGGGHHHHHHHSCCCCSSCCCSHHHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHHCCHHHHHHHTTCCSSSCEEEHH
T ss_pred             cccHHHHHHHHHHHHHhhcccCccHHHHHHhcccceeccCccCCHHHHHHHHHHHHHHcccHHHHHhcccCCCCceeeHH
Confidence            357889999999999997666777899999999999954 4569999999999999999999999999999977789999


Q ss_pred             HHHHHHHH-hCCCCcEEEecc----CCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceeec
Q 047133           81 KYTRAINT-RYGTTPLYKCLN----TSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWA  138 (139)
Q Consensus        81 ~i~~al~~-~g~~~p~l~C~~----~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~p  138 (139)
                      +|++||++ +| +.|.|+|..    +.+|.||+||+|+++.++|+||...  ..+||+.|+||
T Consensus       147 ~i~~al~~~~g-~~~~l~C~~~~~~~~~L~Ei~iC~~~~~~~~~~Cp~~~--~~~C~~~i~~P  206 (208)
T d1iyba_         147 SIKNAIRSAIG-YAPGIECNVDESGNSQLYQIYICVDGSGSNLIECPIFP--RGKCGSSIEFP  206 (208)
T ss_dssp             HHHHHHHHHHS-SCCEEEEEECTTCCEEEEEEEEEEETTSSSBCCCSCCC--CCCCCSEEECC
T ss_pred             HHHHHHHHhhC-CCccEEEEEcCCCCEEEEEEEEEEeCCcCceeECCCCC--CCCCCCceEcC
Confidence            99999999 99 899999975    3589999999999977899999744  35799999998

>d1ucda_ d.124.1.1 (A:) Ribonuclease MC1 {Bitter gourd (Momordica charantia) [TaxId: 3673]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease MC1
species: Bitter gourd (Momordica charantia) [TaxId: 3673]

Probab=100.00  E-value=2.3e-40  Score=245.94  Aligned_cols=128  Identities=22%  Similarity=0.560  Sum_probs=114.7

Q ss_pred             CcchhHHHHHhccCCCCccCCCCChhhHHHhhhccccc-CCCCChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCHH
Q 047133            2 ESNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRG-QPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNPR   80 (139)
Q Consensus         2 ~~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~-~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~~   80 (139)
                      +.+++|+++|+.+||++.  .+++..||+|||+||||| ...+++.+||++|++|++++|+.++|+++||+|+++.|+++
T Consensus        56 ~~~~~l~~~L~~~wp~l~--~~~~~~~w~hEW~KHGtC~~~~~~~~~YF~~al~l~~~~n~~~~L~~~gI~P~~~~y~~~  133 (190)
T d1ucda_          56 TKISHLQSQLNTLWPNVL--RANNQQFWSHEWTKHGTCSESTFNQAAYFKLAVDMRNNYDIIGALRPHAAGPNGRTKSRQ  133 (190)
T ss_dssp             GGGGGGHHHHHHHSCCSS--SSCHHHHHHHHHHHTGGGGTTTCCHHHHHHHHHHHHHTCCHHHHHGGGTCSCSSSEEEHH
T ss_pred             ccchhHHHHHHHHhhhhc--cccChHHHHHHHHhCcccccccCCHHHHHHHHHHHHHhCCHHHHHHHcCCCCCcccccHH
Confidence            467889999999999995  345679999999999995 45579999999999999999999999999999977889999


Q ss_pred             HHHHHHHH-hCCCCcEEEecc-----CCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceee
Q 047133           81 KYTRAINT-RYGTTPLYKCLN-----TSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIW  137 (139)
Q Consensus        81 ~i~~al~~-~g~~~p~l~C~~-----~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~  137 (139)
                      +|++||++ +| +.|.|+|..     ..+|.||++|+|++++++|+||.     .+||+.|+|
T Consensus       134 ~I~~al~~~~g-~~p~l~C~~~~~~~~~~L~Ev~iC~~k~~~~~idCp~-----~~C~~~~~f  190 (190)
T d1ucda_         134 AIKGFLKAKFG-KFPGLRCRTDPQTKVSYLVQVVACFAQDGSTLIDCTR-----DTCGANFIF  190 (190)
T ss_dssp             HHHHHHHHHHS-SCCEEEEEECTTTCCEEEEEEEEEEETTSSSEECCCC-----CCCCSEEEC
T ss_pred             HHHHHHHHhhC-CCceEEEEECCCCCcEEEEEEEEEECCCCCccccCCC-----CCCCCCcCC
Confidence            99999999 99 899999965     24899999999999977999985     369999887

>d1sgla_ d.124.1.1 (A:) Trichomaglin {Gourd (Trichosanthes lepiniana) [TaxId: 282652]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Trichomaglin
species: Gourd (Trichosanthes lepiniana) [TaxId: 282652]

Probab=100.00  E-value=1.9e-39  Score=243.70  Aligned_cols=131  Identities=21%  Similarity=0.503  Sum_probs=115.4

Q ss_pred             CcchhHHHHHhccCCCCccCC-----CCChhhHHHhhhccccc-CCCC-ChHHHHHHHHHHHHhcCHHHHHHhCCCCC-C
Q 047133            2 ESNKSFAAEMNKFWPSLTRDE-----NENEQFWEREWKHHGRG-QPTL-PPEEYFRTAITLVKAANLEAAFRGAGINP-D   73 (139)
Q Consensus         2 ~~~~~l~~~L~~~Wp~l~~~~-----~~~~~fw~hEW~KHGt~-~~~~-~~~~YF~~al~l~~~~~i~~~L~~~gI~P-~   73 (139)
                      ..+++|+++|..+||++....     +++..||+|||+||||| .+.+ ++.+||++|++|++++|+.++|+++||+| +
T Consensus        63 ~~~~~l~~~l~~~wP~~~~~~~~~~~~~~~~fw~hEW~KHGTC~~~~~~~~~~YF~~al~L~~~~~~~~~L~~~gI~P~~  142 (206)
T d1sgla_          63 DEIMPFFGKLVEYWPTYRCALEQSCNNRKEILWGQQYEKHGTCASPVIKGEWNYFKKTLKLFMKYNVDKALEDAGIVASN  142 (206)
T ss_dssp             GGGGGGHHHHHHHSCBSCSSCEECGGGCEECHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHTCHHHHHHHHTCCCCS
T ss_pred             cchhhHHHHHHhhhhhhhhhhhcccccccHHHHHHHHHhcccccCcccccHHHHHHHHHHHHHhcCHHHHHHHCCCCCCC
Confidence            357789999999999995332     34678999999999995 4444 78999999999999999999999999999 5


Q ss_pred             CCCCCHHHHHHHHHH-hCCCCcEEEeccCCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceeec
Q 047133           74 GDKLNPRKYTRAINT-RYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWA  138 (139)
Q Consensus        74 ~~~y~~~~i~~al~~-~g~~~p~l~C~~~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~p  138 (139)
                      ++.|++++|++||++ +| ++|.|+|.++++|.||++|||+++ ++|+||..    .+||..|.||
T Consensus       143 ~~~y~~~~i~~al~~~~g-~~~~l~C~~~~~L~Ev~iC~d~~~-~~~~C~~~----~~Cp~~i~~P  202 (206)
T d1sgla_         143 SKMYDLKDIVVAVESAVG-ARPKLRCDEEGLVQKLSLCFDKDF-KPRDCVQV----GSCPRYVSLP  202 (206)
T ss_dssp             SCEEEHHHHHHHHHHHHS-SCCEEEECTTSBEEEEEEEEETTC-CEECCCCC----CCSCSEEECC
T ss_pred             CceeeHHHHHHHHHHHhC-CCCEEEECCCCeEEEEEEEECCCc-eEeCCCCC----CCCCCCCcCC
Confidence            677999999999999 99 899999976579999999999999 79999862    4699999997

>d1jy5a_ d.124.1.1 (A:) RNase-related protein {Hedge bindweed (Calystegia sepium) [TaxId: 47519]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: RNase-related protein
species: Hedge bindweed (Calystegia sepium) [TaxId: 47519]

Probab=100.00  E-value=1e-38  Score=239.57  Aligned_cols=132  Identities=23%  Similarity=0.477  Sum_probs=115.8

Q ss_pred             CcchhHHHHHhccCCCCccCCC-----CChhhHHHhhhccccc-CCCC-ChHHHHHHHHHHHHhcCHHHHHHhCCCCC-C
Q 047133            2 ESNKSFAAEMNKFWPSLTRDEN-----ENEQFWEREWKHHGRG-QPTL-PPEEYFRTAITLVKAANLEAAFRGAGINP-D   73 (139)
Q Consensus         2 ~~~~~l~~~L~~~Wp~l~~~~~-----~~~~fw~hEW~KHGt~-~~~~-~~~~YF~~al~l~~~~~i~~~L~~~gI~P-~   73 (139)
                      ..+++|.++|..+||++.....     .+..||+|||+||||| ++.+ ++.+||++|++|++++|+.++|+++||+| +
T Consensus        65 ~~~~~l~~~l~~~wp~~~~~~~~~~~~~~~~~w~hEW~KHGTC~~~~~~~~~~YF~~al~l~~~~n~~~~L~~~~i~P~~  144 (207)
T d1jy5a_          65 NEISILSNDLSKYWPSYSCPSSSACGSFDASDLAYEWAKHGTCSSPVLGNQYEYFSTTLMLYFKYNISEILSESGYLPSN  144 (207)
T ss_dssp             GGGGGGHHHHHHHSCBCCSSCEEETTEEESSHHHHHHHHTGGGGTTTSCSHHHHHHHHHHHHHHSCHHHHHHTTTCCCCS
T ss_pred             ccchhhhhHHhhhcchhhhhhhhhhcCCCchHHHHHhhhCccccCCCcCCHHHHHHHHHHHHHhcChHHHHHHcCCCCCC
Confidence            3567899999999999954322     2468999999999995 4444 89999999999999999999999999999 5


Q ss_pred             CCCCCHHHHHHHHHH-hCCCCcEEEeccCCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCceeecC
Q 047133           74 GDKLNPRKYTRAINT-RYGTTPLYKCLNTSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGDIIWAL  139 (139)
Q Consensus        74 ~~~y~~~~i~~al~~-~g~~~p~l~C~~~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~i~~p~  139 (139)
                      ...|++++|++||++ +| +.|.|+|.+ ++|.||+||||+++ ++|+||...   ++||+.|+||.
T Consensus       145 ~~~y~~~~i~~a~~~~~g-~~~~l~C~~-~~L~Ei~iC~~~~~-~~~~Cp~~~---~~Cp~~i~~P~  205 (207)
T d1jy5a_         145 TAEYKVEGIMSAIQSALR-VTPVVKCKS-DAVEQVQICFDKTL-QLQECPSTA---STCPSLVSLPI  205 (207)
T ss_dssp             SCCEEHHHHHHHHHHHHS-SCCEEEEET-TEEEEEEEEECTTS-CEECCCCCC---CCSCSEEBCCC
T ss_pred             cccccHHHHHHHHHHhcC-CCcEEEeCC-CcEEEEEEEECCCC-cEEcCCCCC---CCCCCceEcCC
Confidence            567999999999999 98 899999997 99999999999999 899999743   36999999995

>d1iooa_ d.124.1.1 (A:) Gemetophytic self-incompatibility associated SF11-RNase {Winged tobacco (Nicotiana alata) [TaxId: 4087]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Gemetophytic self-incompatibility associated SF11-RNase
species: Winged tobacco (Nicotiana alata) [TaxId: 4087]

Probab=100.00  E-value=1e-38  Score=237.98  Aligned_cols=129  Identities=22%  Similarity=0.454  Sum_probs=111.0

Q ss_pred             chhHHHHHhccCCCCccCCC---CChhhHHHhhhccccc-CCCCChHHHHHHHHHHHHhcCHHHHHHhCCCCCCCCCCCH
Q 047133            4 NKSFAAEMNKFWPSLTRDEN---ENEQFWEREWKHHGRG-QPTLPPEEYFRTAITLVKAANLEAAFRGAGINPDGDKLNP   79 (139)
Q Consensus         4 ~~~l~~~L~~~Wp~l~~~~~---~~~~fw~hEW~KHGt~-~~~~~~~~YF~~al~l~~~~~i~~~L~~~gI~P~~~~y~~   79 (139)
                      ..+++++|+.+||++..+..   .+..||+|||+||||| .+.+++.+||++|++|++++|+.++|+++||+| +.+|++
T Consensus        56 ~~~~~~~l~~~wp~l~~~~~~~~~~~~fW~hEW~KHGTCa~~~~~~~~YF~~al~l~~~~ni~~~L~~~gI~P-~~ty~~  134 (196)
T d1iooa_          56 TGKMLNDLDKHWMQLKFEQDYGRTEQPSWKYQYIKHGSCCQKRYNQNTYFGLALRLKDKFDLLRTLQTHRIIP-GSSYTF  134 (196)
T ss_dssp             CHHHHHHHHHHTCCTTSCHHHHHHHCHHHHHHHHHTGGGCTTTCCHHHHHHHHHHHHHTCCHHHHHHHTTCCT-TEEECH
T ss_pred             chhhhhHHHHhhhhhccccccCCccchhHHhhhhhccccccccCCHHHHHHHHHHHHHHcCHHHHHHhCcccC-CCcCcH
Confidence            56789999999999964321   2347999999999995 455799999999999999999999999999999 567999


Q ss_pred             HHHHHHHHH-hCCCCcEEEecc----CCcEEEEEEeeecCCCceeeCCCCCCCCCCCCCc--eeec
Q 047133           80 RKYTRAINT-RYGTTPLYKCLN----TSLLMEVTLCVDAKARNFVSCIARPSSLSSCPGD--IIWA  138 (139)
Q Consensus        80 ~~i~~al~~-~g~~~p~l~C~~----~~~L~Ev~~C~~~~~~~~i~Cp~~~~~~~~C~~~--i~~p  138 (139)
                      ++|++||+. +| +.|.|+|.+    ..+|.||++|||++++.+||||...    +|+.+  |.|.
T Consensus       135 ~~I~~Ai~~~~g-~~p~l~C~~~~~g~~~L~Ei~iC~~k~~~~~idCp~~~----~C~~~~~i~f~  195 (196)
T d1iooa_         135 QDIFDAIKTVSQ-ENPDIKCAEVTKGTPELYEIGICFTPNADSMFRCPQSD----TCDKTAKVLFR  195 (196)
T ss_dssp             HHHHHHHHHHHS-SCCEEEEECSSTTCCEEEEEEEEECTTSSSEECCCCCC----CSCTTSCEEEC
T ss_pred             HHHHHHHHHHHC-CCcEEEEeeCCCCCeEEEEEEEEEECCCCeeeCCCCCC----CCCCCCCeeee
Confidence            999999999 99 899999976    3579999999999997799999743    47753  8873

>d1iqqa_ d.124.1.1 (A:) S3-RNase {Japanese pear (Pyrus pyrifolia) [TaxId: 3767]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: S3-RNase
species: Japanese pear (Pyrus pyrifolia) [TaxId: 3767]

Probab=100.00  E-value=1.8e-38  Score=237.37  Aligned_cols=134  Identities=33%  Similarity=0.645  Sum_probs=115.0

Q ss_pred             cchhHHHHHhccCCCCccCCCCChhhHHHhhhccccc-CCC-CChHHHHHHHHHHH--HhcCHHHHHHhCCCCCCCCCCC
Q 047133            3 SNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRG-QPT-LPPEEYFRTAITLV--KAANLEAAFRGAGINPDGDKLN   78 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~-~~~-~~~~~YF~~al~l~--~~~~i~~~L~~~gI~P~~~~y~   78 (139)
                      ..+.|.++|+.+||++. ....+..||+|||+||||| .+. .++.+||++|++|+  +++|+.++|+++||+|+++.|+
T Consensus        56 ~~~~l~~~l~~~Wp~~~-~~~~~~~fw~hEW~KHGTC~~~~~~~~~~YF~~al~L~~~~~~n~~~~L~~~gI~P~~~~~~  134 (200)
T d1iqqa_          56 REKLLEHQLEIIWPNVF-DRTKNNLFWDKEWMKHGSCGYPTIDNENHYFETVIKMYISKKQNVSRILSKAKIEPDGKKRA  134 (200)
T ss_dssp             CCHHHHHHHHHHSCCSS-CGGGHHHHHHHHHHHTGGGSTTTSCSHHHHHHHHHHHHTTTCCCHHHHHHHTTCCSSCCEEC
T ss_pred             hhhhhHHHHHHHhHhhc-cCCCcchhhHHHHhhCccccCcCcCCHHHHHHHHHHHHHHhhCCHHHHHHHcCCCCCCCeee
Confidence            45678999999999994 3455678999999999995 444 48999999999996  8999999999999999777899


Q ss_pred             HHHHHHHHHH-hCCCCcEEEecc---CCcEEEEEEeeecCCCceeeCCCC--CCCCCCCCCc-eee
Q 047133           79 PRKYTRAINT-RYGTTPLYKCLN---TSLLMEVTLCVDAKARNFVSCIAR--PSSLSSCPGD-IIW  137 (139)
Q Consensus        79 ~~~i~~al~~-~g~~~p~l~C~~---~~~L~Ev~~C~~~~~~~~i~Cp~~--~~~~~~C~~~-i~~  137 (139)
                      +++|++||++ ++|.+|.|+|.+   .++|.||++|||+++..+|+||.+  ..+..+||+. |.|
T Consensus       135 ~~~i~~ai~~~~~g~~p~l~C~~~~~~~~L~EI~iC~~~~~~~~~dCp~p~~~~~~~~CP~~~i~~  200 (200)
T d1iqqa_         135 LLDIENAIRNGADNKKPKLKCQKKGTTTELVEITLCSDKSGEHFIDCPHPFEPISPHYCPTNNIKY  200 (200)
T ss_dssp             HHHHHHHHHTTTTTCCCEEEEEEETTEEEEEEEEEEECTTSSSEECCSCCCCTTSTTCCCSSCEEC
T ss_pred             HHHHHHHHHHHhcCCCcEEEeCCCCCceEEEEEEEEEeCCCCccCCCCCCCCCCCCCCCCcCCCcC
Confidence            9999999998 654899999987   247999999999999779999874  3456889986 776

>d1bola_ d.124.1.1 (A:) Ribonuclease Rh {Rhizopus niveus [TaxId: 4844]}

class: Alpha and beta proteins (a+b)
fold: Ribonuclease Rh-like
superfamily: Ribonuclease Rh-like
family: Ribonuclease Rh-like
domain: Ribonuclease Rh
species: Rhizopus niveus [TaxId: 4844]

Probab=100.00  E-value=1.2e-36  Score=230.63  Aligned_cols=128  Identities=28%  Similarity=0.526  Sum_probs=112.2

Q ss_pred             cchhHHHHHhccCCCCccCCCCChhhHHHhhhcccccCC------------CCChHHHHHHHHHHHHhcCHHHHHHhCCC
Q 047133            3 SNKSFAAEMNKFWPSLTRDENENEQFWEREWKHHGRGQP------------TLPPEEYFRTAITLVKAANLEAAFRGAGI   70 (139)
Q Consensus         3 ~~~~l~~~L~~~Wp~l~~~~~~~~~fw~hEW~KHGt~~~------------~~~~~~YF~~al~l~~~~~i~~~L~~~gI   70 (139)
                      .+.++.+.|..+||++   .+++..||+|||+|||||..            .+++.+||.+|++|++++|+.++|+++||
T Consensus        79 ~~~~~~~~l~~~w~~~---~~~~~~fw~hEW~KHGTCa~~~~~~~~~~~~~~~~~~~YF~~al~L~~~~n~~~~L~~~gI  155 (222)
T d1bola_          79 KDSSLYNSMLTYWPSN---QGNNNVFWSHEWSKHGTCVSTYDPDCYDNYEEGEDIVDYFQKAMDLRSQYNVYKAFSSNGI  155 (222)
T ss_dssp             HCHHHHHHHHHHSCCT---TSCHHHHHHHHHHHTGGGCGGGSGGGCTTCCTTHHHHHHHHHHHHHHHHSCHHHHHHTTTC
T ss_pred             hhhhhhhHHHHhhhhh---cCchHHHHHHHHHhcccccccCccccccccccccCHHHHHHHHHHHHHHcccHHHHHhCCc
Confidence            3567889999999999   46678999999999999631            24999999999999999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHH-hCCCCcEEEeccCCcEEEEEEeeecCCC-ceeeCCCCCCCCCCCCCceeec
Q 047133           71 NPDGDKLNPRKYTRAINT-RYGTTPLYKCLNTSLLMEVTLCVDAKAR-NFVSCIARPSSLSSCPGDIIWA  138 (139)
Q Consensus        71 ~P~~~~y~~~~i~~al~~-~g~~~p~l~C~~~~~L~Ev~~C~~~~~~-~~i~Cp~~~~~~~~C~~~i~~p  138 (139)
                      +| +..|++++|++||++ +| ++|.|+|.+ ++|.||++|||+++. .+++|+...  ..+||+.|+||
T Consensus       156 ~P-~~~y~~~~i~~al~~~~g-~~~~l~C~~-~~L~Ev~iC~~~~~~~~~~~~~~~~--~~~C~~~i~~P  220 (222)
T d1bola_         156 TP-GGTYTATEMQSAIESYFG-AKAKIDCSS-GTLSDVALYFYVRGRDTYVITDALS--TGSCSGDVEYP  220 (222)
T ss_dssp             CS-SEEEEHHHHHHHHHHHHS-SCCEEEEET-TEEEEEEEEEEEETTTEEEEECCSC--CCSCCSEEEEC
T ss_pred             CC-CCcCcHHHHHHHHHHhhC-CCcEEEecC-CeEeEEEEEEEcCCccceeeCCCCC--CCCCCCCeEeC
Confidence            99 578999999999999 99 899999998 999999999999984 466666533  35799999998

>d2ciwa1 a.39.3.1 (A:0-119) Cloroperoxidase {Fungus (Caldariomyces fumago) [TaxId: 5474]}

class: All alpha proteins
fold: EF Hand-like
superfamily: Cloroperoxidase
family: Cloroperoxidase
domain: Cloroperoxidase
species: Fungus (Caldariomyces fumago) [TaxId: 5474]

Probab=87.00  E-value=0.21  Score=32.44  Aligned_cols=33  Identities=18%  Similarity=0.187  Sum_probs=28.6

Q ss_pred             HHHHHHhCCCCC-CCCCCCHHHHHHHHHH-hCCCCc
Q 047133           61 LEAAFRGAGINP-DGDKLNPRKYTRAINT-RYGTTP   94 (139)
Q Consensus        61 i~~~L~~~gI~P-~~~~y~~~~i~~al~~-~g~~~p   94 (139)
                      .+.+|++.|+.| +++..+..++..|+.+ ++ +.+
T Consensus        32 gLNaLANHGyLPrdG~nIt~~~l~~a~~~~~n-~~~   66 (120)
T d2ciwa1          32 ALNALANHGYIPHDGRAISRETLQNAFLNHMG-IAN   66 (120)
T ss_dssp             HHHHHHHTTSSCTTCEEECHHHHHHHHHHHHC-BCH
T ss_pred             hhHHHHhcCccCCCCcccCHHHHHHHHHHHhC-ccH
Confidence            467899999999 8888999999999998 87 544