Citrus Sinensis ID: 047145

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380---
Protein Sequence
MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKSGSGDKISQSVNGSNGNNSGQGV
Secondary Structure (PSIPRED)
cEEEcccccccccccccccccccccccccccccccEEEEEEEEccccEEEEEEEEEccccccEEEEEEEccccccccccEEEEEEcccccEEEEEccccccccccccccEEEEEccccEEEEccEEEEEEEEEcccccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHEEEEEccccccccccHHcHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHEEHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEcccHHHcccccccccccccHHcHcccccccEEEEEEEcccccEEEEEEEEcccccccEEEEEEccccccccccEEEEEEEcccccEEEEEEEcccccccccccccccccccccEEEEcccEEEEEEEEEccccccEEEEEEEcccccccccccccccHHcccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccc
Coil and Loop (DISEMBL)
milssssssyaqtcskysfssnrvfkscndlpvlnAYIHynydsssgkleigyrqtrvSSAQWVswavnpteqgmvgSQALVAyrqpdgkiraytspITQYQTTLaegnlafdvsdltaTYANNEMIIFATLGLQNGTTTLHQVWqqgplsgnvpaihsttgpnvqsmgtlnlfsgqtatssggaansklrKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALllrpkpdhkyriYWNFYHHSVGYATIILSIINIYrgfnilkpdnkwkqayTGCIIVLVCVAVVLEIFTWALVIKRkksgsgdkisqsvngsngnnsgqgv
Flexible Loop (DISEMBL)
milssssssyaqTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRkksgsgdkisqsvngsngnnsgqgv
Low Complexity Region (SEG)
MILssssssYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGciivlvcvavvlEIFTWALVIKRKKSGSGDKIsqsvngsngnnsgqgv
Disordered region (IsUnstruct)
***************KYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAI***********************************RNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIK**************************
Disordered Region (DISOPRED)
MI****************FSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKI***********************SDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWA******************************
Disordered Region (DISEMBL)
**************SKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQT*********SKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKR*************************
Disordered Region (DISPRO)
MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQ*********NSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKS**********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKSGSGDKISQSVNGSNGNNSGQGV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	383	2.2.26 [Sep-21-2011]
Q94BT2	252	Auxin-induced in root cul	no	no	0.506	0.769	0.339	5e-22
Q6ZNA5	592	Ferric-chelate reductase	no	no	0.433	0.280	0.284	2e-07
A4QP81	573	Putative ferric-chelate r	yes	no	0.326	0.218	0.311	5e-07
Q8K385	592	Ferric-chelate reductase	yes	no	0.449	0.290	0.264	1e-06
Q6INU7	590	Putative ferric-chelate r	N/A	no	0.464	0.301	0.266	1e-06
Q8MSU3	647	Putative ferric-chelate r	yes	no	0.339	0.200	0.268	4e-05

>sp|Q94BT2|AIR12_ARATH Auxin-induced in root cultures protein 12 OS=Arabidopsis thaliana GN=AIR12 PE=1 SV=3

 Score =  105 bits (262), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 118/233 (50%), Gaps = 39/233 (16%)

Query: 12  QTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRV-SSAQWVSWAVNP 70
           Q C   + +S   F SC DLPVLN+Y+HY Y+SS+  L + +  T   ++  WV+WA+NP
Sbjct: 27  QACKSQNLNSAGPFDSCEDLPVLNSYLHYTYNSSNSSLSVAFVATPSQANGGWVAWAINP 86

Query: 71  TEQGMVGSQALVAYRQPDGK---IRAYTSPITQYQTTLAEGNLAFDVSDLTA-TYANNEM 126
           T   M GSQA +AYR   G    ++ Y   I+ Y ++L EG LAFD  +L A + +   +
Sbjct: 87  TGTKMAGSQAFLAYRSGGGAAPVVKTYN--ISSY-SSLVEGKLAFDFWNLRAESLSGGRI 143

Query: 127 IIFATLGLQNGTTTLHQVWQQGPLSGNV----PAIHSTTGPNVQSMGTLNL--------- 173
            IF T+ +  G  +++QVWQ G   GNV    P +H     N+ S   L+          
Sbjct: 144 AIFTTVKVPAGADSVNQVWQIG---GNVTNGRPGVHPFGPDNLGSHRVLSFTEDAAPGSA 200

Query: 174 ----------FSGQT--ATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVII 214
                      SG T   T++GG  N+    RN++     V+ G+L+ +G I 
Sbjct: 201 PSPGSAPAPGTSGSTTPGTAAGGPGNAGSLTRNVN---FGVNLGILVLLGSIF 250

Arabidopsis thaliana (taxid: 3702)

>sp|Q6ZNA5|FRRS1_HUMAN Ferric-chelate reductase 1 OS=Homo sapiens GN=FRRS1 PE=2 SV=2

 Score = 57.4 bits (137), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 17/183 (9%)

Query: 183 GGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLK-----VFKSAGPAWFYLHVSCQL 237
           GG+ +  L K  +HG L  V+W   + IGV++AR+ K      F     AWF +H     
Sbjct: 362 GGSHSVLLLK--VHGALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMF 419

Query: 238 SAYIVGVAGWATG-IKLG--SESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYR 294
           +  ++    +    I  G  S   G     H  LG ++  L  LQ    + RP      R
Sbjct: 420 TTTVLTCIAFVMPFIYRGGWSRHAGY----HPYLGCIVMTLAVLQPLLAVFRPPLHDPRR 475

Query: 295 IYWNFYHHSVGYATIILSIINIYRGFNI--LKPDNKWKQ-AYTGCIIVLVCVAVVLEIFT 351
             +N+ H S+G A  I+++  ++ G ++  L   + WK  A TG +   V   VVLE+  
Sbjct: 476 QMFNWTHWSMGTAARIIAVAAMFLGMDLPGLNLPDSWKTYAMTGFVAWHVGTEVVLEVHA 535

Query: 352 WAL 354
           + L
Sbjct: 536 YRL 538

Ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|A4QP81|FRRS1_DANRE Putative ferric-chelate reductase 1 OS=Danio rerio GN=frrs1 PE=2 SV=1

 Score = 55.8 bits (133), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 10/135 (7%)

Query: 196 HGVLNAVSWGLLMPIGVIIARYLK-VFKSAG----PAWFYLHVSCQ-LSAYIVGVAGWAT 249
           HG L  +SW     IG+IIARYLK V K  G      WF  HVS   LS     +A    
Sbjct: 370 HGCLMLISWMATGSIGMIIARYLKGVAKGQGCFGKDFWFVAHVSLMTLSIIATAIAFIIV 429

Query: 250 GIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATI 309
            +  G  + G     H  LG ++  L  +Q      R +P H+ R  +N+ H    +A  
Sbjct: 430 FVSAGDWAGG----AHPVLGCLVMILSLIQPIVAAFRCEPQHERRFVFNWAHSCNAFAIK 485

Query: 310 ILSIINIYRGFNILK 324
            L++  I+ G  + +
Sbjct: 486 CLAVAAIFTGLALFE 500

Putative ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Danio rerio (taxid: 7955)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8K385|FRRS1_MOUSE Ferric-chelate reductase 1 OS=Mus musculus GN=FRRS1 PE=1 SV=1

 Score = 54.7 bits (130), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 17/189 (8%)

Query: 177 QTATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYL-----KVFKSAGPAWFYL 231
            T  S GG+ +S L K   HG L  V+W   + IGV++AR+      K F     AWF +
Sbjct: 356 DTPKSVGGSRSSPLLK--AHGALMFVAWMTTVSIGVLVARFFRSVWSKAFFLREAAWFQV 413

Query: 232 HVSCQLSAYIVGVAGWATGIKLG---SESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPK 288
           H    ++  ++    +          S   G     H  LG  +  L  LQ      RP 
Sbjct: 414 HRMLMVATSLLTCVAFVLPFVYRGGWSWRAGY----HPYLGCTVMTLAVLQPLLATFRPP 469

Query: 289 PDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILK---PDNKWKQAYTGCIIVLVCVAV 345
                R  +N+ H SVG A  I+++  ++ G ++     P  +   A  G ++  +   V
Sbjct: 470 LHDPRRQVFNWTHWSVGTAARIIAVAAMFLGMDLPGLNLPSPQKTYAMMGFVVWHIGTEV 529

Query: 346 VLEIFTWAL 354
           +LEI  + L
Sbjct: 530 ILEIHAYRL 538

Ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q6INU7|FRRS1_XENLA Putative ferric-chelate reductase 1 OS=Xenopus laevis GN=frrs1 PE=2 SV=1

 Score = 54.3 bits (129), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 25/203 (12%)

Query: 194 NIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPA--------WFYLHVSCQLSAYIVGVA 245
            +HG +  ++W   + IGVIIAR+   FK   P         WF +H    ++   + V 
Sbjct: 370 KLHGAMMFIAWMTTVSIGVIIARF---FKPVWPTSSLFGEKIWFQIHRCLMITTVFLTVV 426

Query: 246 GWATG-IKLG--SESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHH 302
            +    I  G  S+  G     H  LG+ +  L  LQ    + RP P    R  +N+ H 
Sbjct: 427 AFVLPFIYRGYFSKRAGY----HPHLGVTVMILTVLQPVLAVFRPPPQTHRRGIFNWTHW 482

Query: 303 SVGYATIILSIINIYRGFNILKPD--NKWKQAYT--GCIIVLVCVAVVLEIFTWALVIKR 358
           + G A  I+++  ++ G ++   D  + W   YT  G ++  V V ++LE   + L +K+
Sbjct: 483 ATGTAARIIAVAAMFLGMDLQALDLPDPW-DTYTMIGFVLWHVFVDLLLEAHGFCL-LKK 540

Query: 359 KKSGSGDKISQSVNGSNGNNSGQ 381
            K+   D+I   +N S     G 
Sbjct: 541 AKTMEEDQIG-ILNSSPDEAEGH 562

Putative ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Xenopus laevis (taxid: 8355)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

>sp|Q8MSU3|FRRS1_DROME Putative ferric-chelate reductase 1 homolog OS=Drosophila melanogaster GN=CG8399 PE=2 SV=1

 Score = 49.7 bits (117), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 8/138 (5%)

Query: 194 NIHGVLNAVSWGLLMPIGVIIARYLKVF----KSAG-PAWFYLHVSCQLSAYIVGVAGWA 248
            +HG     +W     +G+I ARY K      +S G   WF  H    ++ + + VA + 
Sbjct: 407 QLHGAFMIAAWIGTTSLGIIFARYFKQTWVGSQSCGTDQWFAWHRLLMVTTWSLTVAAY- 465

Query: 249 TGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYAT 308
             + +  E    V   H  +G++   L  +Q    L RP P+ K R Y+N+ H   G   
Sbjct: 466 --VLIWVELKQAVWHAHSIIGLITVILCFIQPIGALFRPGPNDKKRPYFNWGHWLGGNLA 523

Query: 309 IILSIINIYRGFNILKPD 326
            IL I+ I+    + K +
Sbjct: 524 HILGIVTIFFSVKLPKAE 541

Putative ferric-chelate reductases reduce Fe(3+) to Fe(2+) before its transport from the endosome to the cytoplasm.

Drosophila melanogaster (taxid: 7227)

EC: 1

EC: .

EC: -

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
224137280	383	predicted protein [Populus trichocarpa]	0.960	0.960	0.660	1e-147
359483457	396	PREDICTED: uncharacterized protein LOC10	0.968	0.936	0.658	1e-146
147798014	396	hypothetical protein VITISV_020872 [Viti	0.968	0.936	0.656	1e-145
255581601	382	dopamine beta-monooxygenase, putative [R	0.976	0.979	0.647	1e-144
224089671	381	predicted protein [Populus trichocarpa]	0.937	0.942	0.645	1e-143
89257512	394	hypothetical protein 26.t00022 [Brassica	0.958	0.931	0.625	1e-137
15238124	395	putative auxin-responsive protein [Arabi	0.976	0.946	0.606	1e-135
297794455	396	hypothetical protein ARALYDRAFT_494219 [	0.976	0.944	0.602	1e-131
89257627	380	hypothetical protein 31.t00023 [Brassica	0.971	0.978	0.589	1e-128
297800382	397	predicted protein [Arabidopsis lyrata su	0.963	0.929	0.582	1e-126

>gi|224137280|ref|XP_002322518.1| predicted protein [Populus trichocarpa] gi|222867148|gb|EEF04279.1| predicted protein [Populus trichocarpa]

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 245/371 (66%), Positives = 297/371 (80%), Gaps = 3/371 (0%)

Query: 8   SSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWA 67
           SS AQ+C  Y+ SSN+ F++CNDLP LN+Y+H+NYDSSS KL+I YR T ++S++WV+WA
Sbjct: 6   SSTAQSCKSYALSSNKTFRACNDLPYLNSYLHWNYDSSSNKLQIAYRHTGITSSRWVAWA 65

Query: 68  VNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMI 127
           +NPT  GM GSQALVAY+Q DG +RAYTSPI+ YQT+L EG L+FDVSDL+AT ANNE+I
Sbjct: 66  INPTSTGMAGSQALVAYQQTDGTMRAYTSPISSYQTSLQEGKLSFDVSDLSATLANNEII 125

Query: 128 IFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAAN 187
           IFAT+GL N +TT++ VWQ G +SGN   +H+T+G NVQSMGTLNL SG+++++ G   N
Sbjct: 126 IFATIGLSNTSTTVNHVWQDGAVSGNATQVHATSGANVQSMGTLNLLSGESSSTGG---N 182

Query: 188 SKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGW 247
            ++RKRNIHGVLNAVSWG+LMPIG  IARYLK FKSA PAWFYLHV CQ  AYIVGVAGW
Sbjct: 183 DRIRKRNIHGVLNAVSWGILMPIGAFIARYLKAFKSADPAWFYLHVGCQSIAYIVGVAGW 242

Query: 248 ATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYA 307
            TG+KLGSES  +    HRT+GI++FCLGTLQ FALLLRPKPDHKYR YWN YHH VGY+
Sbjct: 243 GTGLKLGSESASIQYDAHRTIGIILFCLGTLQVFALLLRPKPDHKYRFYWNIYHHLVGYS 302

Query: 308 TIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKSGSGDKI 367
            IILSIINI++GF+IL PD KWK AY G I  L   AV LE +TW LV+KRK+S    K+
Sbjct: 303 VIILSIINIFKGFSILNPDKKWKNAYIGVIAALAFNAVWLEGYTWYLVVKRKRSEIAGKM 362

Query: 368 SQSVNGSNGNN 378
              +NGSNG N
Sbjct: 363 PHGMNGSNGVN 373

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483457|ref|XP_002267894.2| PREDICTED: uncharacterized protein LOC100246969 [Vitis vinifera]

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 253/384 (65%), Positives = 307/384 (79%), Gaps = 13/384 (3%)

Query: 1   MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSS 60
           M+L+SS    AQ+CS+Y+FSSNRVF SCNDLP LN+++H+N++SSS  ++I YR T V+S
Sbjct: 17  MLLTSS----AQSCSRYAFSSNRVFSSCNDLPYLNSFLHWNFNSSSSGVQIAYRHTGVTS 72

Query: 61  AQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTAT 120
           + WV+WA+N    GMVGSQALVAYR PDG I+AYTS +  YQT L+E NL+F VSDL+AT
Sbjct: 73  SMWVAWAINLDSTGMVGSQALVAYRNPDGTIKAYTSSVDSYQTALSESNLSFPVSDLSAT 132

Query: 121 YANNEMIIFATLGLQNGTTTLHQVWQQGPLSG--NVPAIHSTTGPNVQSMGTLNLFSGQT 178
           Y+N+EMII+ATL L + +TT++QVWQ GPLS   N P +H+ +GPNVQSMGTL+L SG++
Sbjct: 133 YSNSEMIIYATLELPHNSTTVNQVWQHGPLSATTNTPGVHAFSGPNVQSMGTLDLLSGRS 192

Query: 179 ATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLS 238
           AT+  G  NS+ R RNIHGVLNAVSWG+LMPIG IIARY++VFKSA PAWFYLHV+CQ S
Sbjct: 193 ATAPVG--NSRTRNRNIHGVLNAVSWGILMPIGAIIARYMRVFKSADPAWFYLHVTCQSS 250

Query: 239 AYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWN 298
           AYI+GVAGWATGIKLGSES GV    HR +GIV+FCLGTLQ FALLLRPK DHKYR YW+
Sbjct: 251 AYIIGVAGWATGIKLGSESSGVQYTAHRAIGIVLFCLGTLQVFALLLRPKKDHKYRFYWD 310

Query: 299 FYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKR 358
            YHHSVGY  IILSIINIY+GF+IL P+ KWK+AYTG ++ L   AV LE FTW +V+KR
Sbjct: 311 IYHHSVGYTVIILSIINIYKGFDILDPEKKWKRAYTGILVALALSAVFLEAFTWYIVLKR 370

Query: 359 KKSGSGDKISQSVNGSNGNNSGQG 382
           KKS    KI    NG+NG N G G
Sbjct: 371 KKSARSGKI----NGANGVN-GHG 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147798014|emb|CAN65006.1| hypothetical protein VITISV_020872 [Vitis vinifera]

 Score =  522 bits (1345), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 252/384 (65%), Positives = 306/384 (79%), Gaps = 13/384 (3%)

Query: 1   MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSS 60
           M+L+SS    AQ+CS+Y+FSSNRVF SCNDLP LN+++H+N++SSS  ++I YR T V+S
Sbjct: 17  MLLTSS----AQSCSRYAFSSNRVFSSCNDLPYLNSFLHWNFNSSSSGVQIAYRHTGVTS 72

Query: 61  AQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTAT 120
           + WV+WA+N    GMVGSQALVAYR PDG I+AYTS +  YQT L+E NL+F VSDL+AT
Sbjct: 73  SMWVAWAINLDSTGMVGSQALVAYRNPDGTIKAYTSSVDSYQTALSESNLSFPVSDLSAT 132

Query: 121 YANNEMIIFATLGLQNGTTTLHQVWQQGPLSG--NVPAIHSTTGPNVQSMGTLNLFSGQT 178
           Y+N+EMII+ATL L + +TT++QVWQ GPLS   N P +H+ +GPNVQSMGTL+L SG++
Sbjct: 133 YSNSEMIIYATLELPHNSTTVNQVWQHGPLSATTNTPGVHAFSGPNVQSMGTLDLLSGRS 192

Query: 179 ATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLS 238
           AT+  G  NS+ R RNIHGVLNAVSWG+LMPIG IIARY++VFKSA PAWFYLHV+CQ S
Sbjct: 193 ATAPVG--NSRTRNRNIHGVLNAVSWGILMPIGAIIARYMRVFKSADPAWFYLHVTCQSS 250

Query: 239 AYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWN 298
           AYI+GVAGWATGIKLGSES GV    HR +GIV+FCLGTLQ FALLLRPK DHKYR YW+
Sbjct: 251 AYIIGVAGWATGIKLGSESSGVQYTAHRAIGIVLFCLGTLQVFALLLRPKKDHKYRFYWD 310

Query: 299 FYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKR 358
            YHHSVGY  IILSIINIY+GF+IL P+ KWK+AYTG ++ L   AV LE FTW +V+KR
Sbjct: 311 IYHHSVGYTVIILSIINIYKGFDILDPEKKWKRAYTGILVALALSAVFLEAFTWYIVLKR 370

Query: 359 KKSGSGDKISQSVNGSNGNNSGQG 382
           KKS    K     NG+NG N G G
Sbjct: 371 KKSARSGK----XNGANGVN-GHG 389

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581601|ref|XP_002531605.1| dopamine beta-monooxygenase, putative [Ricinus communis] gi|223528772|gb|EEF30780.1| dopamine beta-monooxygenase, putative [Ricinus communis]

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 248/383 (64%), Positives = 306/383 (79%), Gaps = 9/383 (2%)

Query: 1   MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRV-S 59
           M+L SS    AQTCS+Y+FSSN++F +CNDLP L+A++++NY+SSS KL+I YR T V S
Sbjct: 3   MVLYSS----AQTCSRYTFSSNQMFSACNDLPYLDAFLYWNYNSSSSKLQIAYRHTGVLS 58

Query: 60  SAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTA 119
           S +WV+WA+NP+  GMVGSQALVAY+Q DG ++AYTSP+  YQT L EG L+FDVSDL+A
Sbjct: 59  SDRWVAWAINPSSTGMVGSQALVAYQQSDGTMKAYTSPVNGYQTALQEGKLSFDVSDLSA 118

Query: 120 TYANNEMIIFATLGLQN-GTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQT 178
           TY NNEMIIFATL + N G T+++QVWQ+GPLSG+ P +HST+GPNVQSMGT++L SG  
Sbjct: 119 TYGNNEMIIFATLDISNIGKTSINQVWQEGPLSGDSPQMHSTSGPNVQSMGTVDLLSGTV 178

Query: 179 ATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLS 238
             S     N K +KRNIHGVLNAVSWG++MP+G + ARYLKVFKSA PAWFYLHVSCQ +
Sbjct: 179 GAS---GRNDKTKKRNIHGVLNAVSWGIMMPLGALTARYLKVFKSADPAWFYLHVSCQST 235

Query: 239 AYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWN 298
           AYIVGVAGWATG+KLGSES GV    HRT+GI++FCLGTLQ FALLLRPKPDHKYR YWN
Sbjct: 236 AYIVGVAGWATGLKLGSESSGVQYDAHRTIGIILFCLGTLQVFALLLRPKPDHKYRFYWN 295

Query: 299 FYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKR 358
            YHH+VGY  I+LSIINI++GF+IL P  KWK AY G I  L   A  LE +TW +V+KR
Sbjct: 296 IYHHTVGYTVIVLSIINIFKGFDILNPAKKWKNAYIGVIAALALNAAWLEGYTWYIVVKR 355

Query: 359 KKSGSGDKISQSVNGSNGNNSGQ 381
           ++S S  K++Q +NG NG ++ Q
Sbjct: 356 RRSESDGKMTQGINGVNGYSARQ 378

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089671|ref|XP_002308796.1| predicted protein [Populus trichocarpa] gi|222854772|gb|EEE92319.1| predicted protein [Populus trichocarpa]

 Score =  513 bits (1321), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 244/378 (64%), Positives = 294/378 (77%), Gaps = 19/378 (5%)

Query: 1   MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSS 60
           +++S   SS AQ+C  Y+FSSN++F++CNDLPVLN+Y+H+NYDSSS KL+I YR T ++S
Sbjct: 13  ILMSLIFSSTAQSCKSYAFSSNKIFRACNDLPVLNSYLHWNYDSSSNKLQIAYRHTGITS 72

Query: 61  AQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTAT 120
           ++WV+WA+NPT  GM                 AYTSPI+ YQT+L EG L+FDVSDL+AT
Sbjct: 73  SKWVAWAINPTSTGMA----------------AYTSPISSYQTSLQEGKLSFDVSDLSAT 116

Query: 121 YANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTAT 180
            ANNE+I+FATL L N +TT++QVWQ GPLSGN P IHST+G NVQSMGTLNL SG++++
Sbjct: 117 LANNELIMFATLELSNTSTTVNQVWQDGPLSGNAPQIHSTSGSNVQSMGTLNLLSGESSS 176

Query: 181 SSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAY 240
           + G   N K+RKRNIHGVLNAVSWG+LMPIG +IARYLKVFKSA PAWFYLH SCQ  AY
Sbjct: 177 TGG---NGKIRKRNIHGVLNAVSWGILMPIGALIARYLKVFKSADPAWFYLHASCQSIAY 233

Query: 241 IVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFY 300
           IVGVAGWATG+KLGSES G+    HRT+GI++FCLGTLQ FALLLRPK DHKYR YWN Y
Sbjct: 234 IVGVAGWATGLKLGSESAGIQYDAHRTIGIILFCLGTLQVFALLLRPKADHKYRFYWNIY 293

Query: 301 HHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKK 360
           HH VGY  IILSIINI++GFNIL PD KWK AY G I+ L   AV LE +TW +V+KRK 
Sbjct: 294 HHIVGYTVIILSIINIFKGFNILNPDEKWKNAYIGVIVALALNAVWLEGYTWYVVVKRKS 353

Query: 361 SGSGDKISQSVNGSNGNN 378
           S +  K+    NGSNG N
Sbjct: 354 SETAGKMPHFTNGSNGAN 371

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89257512|gb|ABD65002.1| hypothetical protein 26.t00022 [Brassica oleracea]

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 232/371 (62%), Positives = 290/371 (78%), Gaps = 4/371 (1%)

Query: 6   SSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVS 65
           + SS AQTCS Y FSSN +F+SCNDLPVL++++HY YDSSSG L++ YR   +S  +WV+
Sbjct: 19  TESSLAQTCSNYQFSSNSLFESCNDLPVLDSFLHYTYDSSSGNLQVAYRHNNLSPGKWVA 78

Query: 66  WAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNE 125
           WAVNPT  GMVG+QA+VAY   DG +RAYTSPI+ YQT+L EG L+F+VS+L+ATY NNE
Sbjct: 79  WAVNPTSTGMVGAQAIVAYPISDGTVRAYTSPISSYQTSLQEGELSFNVSELSATYQNNE 138

Query: 126 MIIFATLGL--QNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTA-TSS 182
           MI+FATL L   NG   ++ VWQ G LSGN    H T+G N++S+ TLNL SG +A TS 
Sbjct: 139 MIVFATLSLPLTNGGN-INTVWQDGSLSGNSLLPHPTSGSNIRSVSTLNLISGTSASTSG 197

Query: 183 GGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIV 242
           GGA +SKL+KRNIHG+LNAVSWG++MPIG IIARYL+V KSAGPAWFYLHV+CQ SAYI+
Sbjct: 198 GGAGDSKLKKRNIHGILNAVSWGIMMPIGAIIARYLRVSKSAGPAWFYLHVTCQASAYII 257

Query: 243 GVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHH 302
           GVAGW TGIKLGSES G+   THR +GI +FCL T+Q FA+ LRPKP+HKYR+YWN YHH
Sbjct: 258 GVAGWGTGIKLGSESEGIQFSTHRAIGIALFCLATVQVFAMFLRPKPEHKYRLYWNIYHH 317

Query: 303 SVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKSG 362
           +VGY  I+L+++NI++G +IL P+ +W+ AYT  I+ L  VA VLE FTW +VIKR K+ 
Sbjct: 318 TVGYTVIVLAVVNIFKGLDILNPEKQWRNAYTAIIVTLGLVAAVLEGFTWYVVIKRGKAE 377

Query: 363 SGDKISQSVNG 373
              K SQ  NG
Sbjct: 378 ESSKTSQLGNG 388

Source: Brassica oleracea

Species: Brassica oleracea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15238124|ref|NP_199564.1| putative auxin-responsive protein [Arabidopsis thaliana] gi|9758781|dbj|BAB09079.1| unnamed protein product [Arabidopsis thaliana] gi|46518427|gb|AAS99695.1| At5g47530 [Arabidopsis thaliana] gi|51971050|dbj|BAD44217.1| unknown protein [Arabidopsis thaliana] gi|332008146|gb|AED95529.1| putative auxin-responsive protein [Arabidopsis thaliana]

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 230/379 (60%), Positives = 294/379 (77%), Gaps = 5/379 (1%)

Query: 1   MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSS 60
            I   + S+ AQ CS Y FS+NR+F+SCNDLPVL++++HY YDSSSG L+I YR T+++ 
Sbjct: 14  FIFIITKSALAQKCSNYKFSTNRLFESCNDLPVLDSFLHYTYDSSSGNLQIAYRHTKLTP 73

Query: 61  AQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTAT 120
            +WV+WAVNPT  GMVG+QA+VAY Q DG +RAYTSPI+ YQT+L E  L+F+VS L+AT
Sbjct: 74  GKWVAWAVNPTSTGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLEAELSFNVSQLSAT 133

Query: 121 YANNEMIIFATLGL--QNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQT 178
           Y NNEM+I+A L L   NG   ++ VWQ G LSGN P  H T+G NV+S+ TLNL SG +
Sbjct: 134 YQNNEMVIYAILNLPLANGGI-INTVWQDGSLSGNNPLPHPTSGNNVRSVSTLNLVSGAS 192

Query: 179 -ATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQL 237
            +TS+G    SKLRKRNIHG+LN VSWG++MPIG IIARYLKV KSA PAWFYLHV CQ 
Sbjct: 193 GSTSTGAGGASKLRKRNIHGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVFCQS 252

Query: 238 SAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYW 297
           SAYI+GVAGWATG+KLG+ES G+    HR +GI +FCL T+Q FA+ LRPKP+HKYR+YW
Sbjct: 253 SAYIIGVAGWATGLKLGNESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYRVYW 312

Query: 298 NFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIK 357
           N YHH+VGY+ IIL+++N+++G +IL P+ +W+ AYT  I+VL  VAVVLE FTW +VIK
Sbjct: 313 NIYHHTVGYSVIILAVVNVFKGLDILSPEKQWRNAYTAIIVVLGIVAVVLEGFTWYVVIK 372

Query: 358 RKKSGSGDKISQSVNGSNG 376
           R K+ +  K SQ V G++G
Sbjct: 373 RGKAEASAKTSQRV-GNDG 390

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794455|ref|XP_002865112.1| hypothetical protein ARALYDRAFT_494219 [Arabidopsis lyrata subsp. lyrata] gi|297310947|gb|EFH41371.1| hypothetical protein ARALYDRAFT_494219 [Arabidopsis lyrata subsp. lyrata]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 229/380 (60%), Positives = 290/380 (76%), Gaps = 6/380 (1%)

Query: 1   MILSSSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSS 60
           +I   + S+ AQ CS Y FS+NR+F+SCNDL VL++++HY YDSSSG L+I YR T+++S
Sbjct: 14  LIFIITESALAQKCSNYKFSTNRLFESCNDLSVLDSFLHYTYDSSSGNLQIAYRHTKLTS 73

Query: 61  AQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTAT 120
            +WV+WAVNPT  GMVG+QA+VAY Q DG +RAYTSPI+ YQT L E  L+F+VS+L+AT
Sbjct: 74  GKWVAWAVNPTSTGMVGAQAIVAYPQSDGSVRAYTSPISSYQTNLQEAELSFNVSELSAT 133

Query: 121 YANNEMIIFATLGL--QNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQT 178
           Y NNEMII+ATL L   NG   ++ VWQ G LSGN P  H T+G NV+S+ TLNL SG +
Sbjct: 134 YQNNEMIIYATLNLPLANGGI-INTVWQDGSLSGNNPLPHPTSGNNVRSVSTLNLVSGAS 192

Query: 179 ATSSGGAANS--KLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQ 236
            ++S G      KLRKRNIHG+LN VSWG++MPIG IIARYLKV KSA PAWFYLHV CQ
Sbjct: 193 GSTSTGGGGGASKLRKRNIHGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVFCQ 252

Query: 237 LSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIY 296
            SAYI+GVAGWATG+KLGSES G+    HR +GI +FCL T+Q FA+ LRPKP+HKYR+Y
Sbjct: 253 SSAYIIGVAGWATGLKLGSESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYRVY 312

Query: 297 WNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVI 356
           WN YHH+VGY  IIL+++N+++G +IL P+ +W+ AYT  I+VL  VA VLE FTW +VI
Sbjct: 313 WNIYHHTVGYTVIILAVVNVFKGLDILSPEKQWRNAYTAIIVVLGIVAAVLEAFTWYVVI 372

Query: 357 KRKKSGSGDKISQSVNGSNG 376
           KR K+    K  Q V G++G
Sbjct: 373 KRGKAEESAKTGQRV-GNDG 391

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89257627|gb|ABD65115.1| hypothetical protein 31.t00023 [Brassica oleracea]

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 223/378 (58%), Positives = 285/378 (75%), Gaps = 6/378 (1%)

Query: 6   SSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVS 65
           ++ S+AQTCSKY FSSN VF SCNDLP L++++HY YDSS+G L I YR T+++S +WV+
Sbjct: 2   TTMSFAQTCSKYKFSSNNVFASCNDLPFLDSFLHYTYDSSTGTLHIAYRHTKLTSGKWVA 61

Query: 66  WAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNE 125
           WAVNPT  GMVG+QA+VAY Q DG +R YTSPI  YQT+L EG+L+F+VS L+ATY NNE
Sbjct: 62  WAVNPTSTGMVGAQAIVAYPQSDGTVRVYTSPIRSYQTSLQEGDLSFNVSGLSATYENNE 121

Query: 126 MIIFATLGLQ----NGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATS 181
           M+I A+L L     NG T ++ VWQ G +SGN P  H T+G NV+S+ TLN+ SG +A +
Sbjct: 122 MVILASLSLAQDLGNGGT-INTVWQDGSMSGNSPLPHPTSGNNVRSVSTLNVVSGVSAAA 180

Query: 182 SGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYI 241
            G   +SKLRKRNIHG+LN VSWG++MP+G IIARYL+V KSA PAWFY+HV CQ SAYI
Sbjct: 181 GGAGGSSKLRKRNIHGILNGVSWGIMMPVGAIIARYLRVAKSANPAWFYIHVFCQASAYI 240

Query: 242 VGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYH 301
           +GVAGWATG+KLG +S G+   THR++GI +F L T+Q FA+ LRPKP+HK+R+YWN YH
Sbjct: 241 IGVAGWATGLKLGGDSPGIQYSTHRSIGIALFSLATVQVFAMFLRPKPEHKHRLYWNIYH 300

Query: 302 HSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKS 361
           HS+GY  IIL ++N+++G  IL P  +WK AYTG I+ L  VA +LE FTW +VIKR+K 
Sbjct: 301 HSIGYTLIILGVVNVFKGLEILSPKKQWKNAYTGIIVALAIVAALLEAFTWYVVIKRRKL 360

Query: 362 GSGDKISQSVNGSNGNNS 379
               K S     SNG  S
Sbjct: 361 EESAK-SSPHGASNGTRS 377

Source: Brassica oleracea

Species: Brassica oleracea

Genus: Brassica

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297800382|ref|XP_002868075.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297313911|gb|EFH44334.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  457 bits (1175), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 218/374 (58%), Positives = 281/374 (75%), Gaps = 5/374 (1%)

Query: 5   SSSSSYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWV 64
           SS+ S+AQTCS Y FSSN VF SCNDLP L++++HY Y+SS+G L I YR T+++S +WV
Sbjct: 20  SSTLSFAQTCSNYKFSSNNVFDSCNDLPFLDSFLHYTYESSTGSLHIAYRHTKLTSGKWV 79

Query: 65  SWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANN 124
           +WAVNPT  GMVG+QA+VAY Q DG +R YTSPI  YQT+L EG+L+F+VS L+ATY NN
Sbjct: 80  AWAVNPTSTGMVGAQAIVAYPQTDGTVRVYTSPIRSYQTSLQEGDLSFNVSGLSATYENN 139

Query: 125 EMIIFATLGLQ----NGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTAT 180
           E+++ A+L L     NG T ++ VWQ G +SGN    H T+G NV+S+ TLNL SG +A 
Sbjct: 140 EIVVLASLKLSQDLGNGGT-INTVWQDGSMSGNSLLPHPTSGNNVRSLSTLNLVSGVSAA 198

Query: 181 SSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAY 240
           + G   +SKLRKRNIHG+LN VSWG++MPIG IIARYL+V KSA PAWFY+HV CQ SAY
Sbjct: 199 AGGAGGSSKLRKRNIHGILNGVSWGIMMPIGAIIARYLRVAKSADPAWFYIHVFCQASAY 258

Query: 241 IVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFY 300
           I+GVAGWATG+KLG +S G+   THR +GI +F L T+Q FA+ LRPKP+HK+R+YWN Y
Sbjct: 259 IIGVAGWATGLKLGGDSPGIQYSTHRAIGIALFSLATVQVFAMFLRPKPEHKHRLYWNIY 318

Query: 301 HHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKK 360
           HH++GY  IIL ++N+++G  IL P  +WK AY G I+ L  VA VLE FTW +VIKR+K
Sbjct: 319 HHTIGYTIIILGVVNVFKGLGILSPKKQWKNAYIGIIVALAIVATVLEAFTWYVVIKRRK 378

Query: 361 SGSGDKISQSVNGS 374
             +      + NGS
Sbjct: 379 LEAKTAQHGASNGS 392

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	383
TAIR|locus:2168948	395	AT5G47530 [Arabidopsis thalian	0.926	0.898	0.598	9.5e-121
TAIR|locus:2130789	402	AT4G17280 [Arabidopsis thalian	0.913	0.870	0.580	8.8e-118
TAIR|locus:505006660	404	AT5G35735 "AT5G35735" [Arabido	0.903	0.856	0.5	2e-97
TAIR|locus:2090240	393	AT3G25290 "AT3G25290" [Arabido	0.919	0.895	0.475	8.6e-88
TAIR|locus:2123271	394	AT4G12980 "AT4G12980" [Arabido	0.939	0.913	0.454	1.8e-87
TAIR|locus:2077690	466	AT3G59070 [Arabidopsis thalian	0.916	0.753	0.451	1.9e-83
TAIR|locus:2049254	404	AT2G04850 [Arabidopsis thalian	0.879	0.834	0.322	6.3e-53
TAIR|locus:2156559	255	AT5G48750 [Arabidopsis thalian	0.569	0.854	0.443	1.7e-52
TAIR|locus:2091097	369	AT3G07570 [Arabidopsis thalian	0.650	0.674	0.317	3.1e-28
TAIR|locus:2076770	398	AT3G61750 [Arabidopsis thalian	0.720	0.693	0.276	1.1e-23

TAIR|locus:2168948 AT5G47530 [Arabidopsis thaliana (taxid:3702)]

 Score = 1188 (423.3 bits), Expect = 9.5e-121, P = 9.5e-121
 Identities = 215/359 (59%), Positives = 274/359 (76%)

Query:    11 AQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNP 70
             AQ CS Y FS+NR+F+SCNDLPVL++++HY YDSSSG L+I YR T+++  +WV+WAVNP
Sbjct:    24 AQKCSNYKFSTNRLFESCNDLPVLDSFLHYTYDSSSGNLQIAYRHTKLTPGKWVAWAVNP 83

Query:    71 TEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFA 130
             T  GMVG+QA+VAY Q DG +RAYTSPI+ YQT+L E  L+F+VS L+ATY NNEM+I+A
Sbjct:    84 TSTGMVGAQAIVAYPQSDGTVRAYTSPISSYQTSLLEAELSFNVSQLSATYQNNEMVIYA 143

Query:   131 TLGLQ--NGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQT-ATSSGGAAN 187
              L L   NG   ++ VWQ G LSGN P  H T+G NV+S+ TLNL SG + +TS+G    
Sbjct:   144 ILNLPLANGGI-INTVWQDGSLSGNNPLPHPTSGNNVRSVSTLNLVSGASGSTSTGAGGA 202

Query:   188 SKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGW 247
             SKLRKRNIHG+LN VSWG++MPIG IIARYLKV KSA PAWFYLHV CQ SAYI+GVAGW
Sbjct:   203 SKLRKRNIHGILNGVSWGIMMPIGAIIARYLKVSKSADPAWFYLHVFCQSSAYIIGVAGW 262

Query:   248 ATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYA 307
             ATG+KLG+ES G+    HR +GI +FCL T+Q FA+ LRPKP+HKYR+YWN YHH+VGY+
Sbjct:   263 ATGLKLGNESAGIQFTFHRAVGIALFCLATIQVFAMFLRPKPEHKYRVYWNIYHHTVGYS 322

Query:   308 TIILSIINIYRGFNILKPDNKWKQAYTGXXXXXXXXXXXXEIFTWALVIKRKKSGSGDK 366
              IIL+++N+++G +IL P+ +W+ AYT             E FTW +VIKR K+ +  K
Sbjct:   323 VIILAVVNVFKGLDILSPEKQWRNAYTAIIVVLGIVAVVLEGFTWYVVIKRGKAEASAK 381

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2130789 AT4G17280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1160 (413.4 bits), Expect = 8.8e-118, P = 8.8e-118
 Identities = 206/355 (58%), Positives = 266/355 (74%)

Query:    10 YAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVN 69
             +AQTCSKY FSSN VF SCNDLP L++++HY Y+SS+G L I YR T+++S +WV+WAVN
Sbjct:    30 FAQTCSKYKFSSNNVFDSCNDLPFLDSFLHYTYESSTGSLHIAYRHTKLTSGKWVAWAVN 89

Query:    70 PTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIF 129
             PT  GMVG+QA+VAY Q DG +R YTSPI  YQT+L EG+L+F+VS L+ATY NNE+++ 
Sbjct:    90 PTSTGMVGAQAIVAYPQSDGTVRVYTSPIRSYQTSLLEGDLSFNVSGLSATYQNNEIVVL 149

Query:   130 ATLGLQ----NGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGA 185
             A+L L     NG T ++ VWQ G +SGN    H T+G NV+S+ TLNL SG +A + G  
Sbjct:   150 ASLKLAQDLGNGGT-INTVWQDGSMSGNSLLPHPTSGNNVRSVSTLNLVSGVSAAAGGAG 208

Query:   186 ANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVA 245
              +SKLRKRNIHG+LN VSWG++MP+G IIARYL+V KSA PAWFY+HV CQ SAYI+GVA
Sbjct:   209 GSSKLRKRNIHGILNGVSWGIMMPLGAIIARYLRVAKSADPAWFYIHVFCQASAYIIGVA 268

Query:   246 GWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVG 305
             GWATG+KLG +S G+   THR +GI +F L T+Q FA+ LRPKP+HK+R+YWN YHH++G
Sbjct:   269 GWATGLKLGGDSPGIQYSTHRAIGIALFSLATVQVFAMFLRPKPEHKHRLYWNIYHHTIG 328

Query:   306 YATIILSIINIYRGFNILKPDNKWKQAYTGXXXXXXXXXXXXEIFTWALVIKRKK 360
             Y  IIL ++N+++G  IL P  +WK AY G            E FTW +VIKR+K
Sbjct:   329 YTIIILGVVNVFKGLGILSPKKQWKNAYIGIIVVLAIVATLLEAFTWYVVIKRRK 383

GO:0005576 "extracellular region" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:505006660 AT5G35735 "AT5G35735" [Arabidopsis thaliana (taxid:3702)]

 Score = 968 (345.8 bits), Expect = 2.0e-97, P = 2.0e-97
 Identities = 175/350 (50%), Positives = 241/350 (68%)

Query:    14 CSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQ 73
             C+ + F++N  F  C+DL  L +++H+ Y+  +G + I YR    S++ WV+W +NP+  
Sbjct:    29 CNTHRFTNNLAFADCSDLSALGSFLHWTYNEQNGTVSIAYRHPGTSASSWVAWGLNPSST 88

Query:    74 GMVGSQALVAYRQPD-GKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATL 132
              MVG+QALVA+      + +AYTS ++ Y T L   +L+F VS L+AT  + E+ IFATL
Sbjct:    89 QMVGTQALVAFTNTTTNQFQAYTSSVSSYGTRLERSSLSFGVSGLSATLVSGEVTIFATL 148

Query:   133 GLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAANSKLRK 192
              L     T +Q+WQ GP+   VPA H T+G N++S G ++  +GQ A++ GG +  +LRK
Sbjct:   149 ELSPNLITANQLWQVGPVVNGVPASHQTSGDNMRSSGRIDFRTGQ-ASAGGGGSGDRLRK 207

Query:   193 RNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIK 252
             RN HGVLNAVSWG+LMP+G ++ARY+KVF  A P WFYLH++ Q+S Y++GVAGWATGIK
Sbjct:   208 RNTHGVLNAVSWGVLMPMGAMMARYMKVF--ADPTWFYLHIAFQVSGYVIGVAGWATGIK 265

Query:   253 LGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILS 312
             LG++S G    THR LGI +F   TLQ FALL+RPKPDHKYR YWN YHH+VGY TIILS
Sbjct:   266 LGNDSPGTSYSTHRNLGIALFTFATLQVFALLVRPKPDHKYRTYWNVYHHTVGYTTIILS 325

Query:   313 IINIYRGFNILKPDNKWKQAYTGXXXXXXXXXXXXEIFTWALVIKRKKSG 362
             I+NI++GF+IL P++KW+ AY G            E  TW +V++RK  G
Sbjct:   326 IVNIFKGFDILDPEDKWRWAYIGILIFLGACVLILEPLTWFIVLRRKSRG 375

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009625 "response to insect" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

TAIR|locus:2090240 AT3G25290 "AT3G25290" [Arabidopsis thaliana (taxid:3702)]

 Score = 877 (313.8 bits), Expect = 8.6e-88, P = 8.6e-88
 Identities = 173/364 (47%), Positives = 231/364 (63%)

Query:    11 AQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNP 70
             +QTC   +FS ++ +  C DLP L A++HY+YD+S+  L + +         W++WA+NP
Sbjct:    25 SQTCKSQTFSGDKTYPHCLDLPQLKAFLHYSYDASNTTLAVVFSAPPAKPGGWIAWAINP 84

Query:    71 TEQGMVGSQALVAYRQP-DGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNE---M 126
                GMVGSQ LVAY+ P +G     T  I+ Y ++L    LAFDV D+ A  A  +   +
Sbjct:    85 KATGMVGSQTLVAYKDPGNGVAVVKTLNISSY-SSLIPSKLAFDVWDMKAEEAARDGGSL 143

Query:   127 IIFATLGLQNGTTT---LHQVWQQGP-LS-GNVPAIHSTTGPNVQSMGTLNLFSGQTA-T 180
              IFA + +         ++QVWQ GP L  G +   H+    N+ SM +L+L    +  T
Sbjct:   144 RIFARVKVPADLVAKGKVNQVWQVGPELGPGGMIGRHAFDSANLASMSSLDLKGDNSGGT 203

Query:   181 SSGG-AANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSA 239
              SGG   N+K++ RNIHG+LNAVSWG+L PIG IIARY++VF SA PAWFYLHVSCQ SA
Sbjct:   204 ISGGDEVNAKIKNRNIHGILNAVSWGILFPIGAIIARYMRVFDSADPAWFYLHVSCQFSA 263

Query:   240 YIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNF 299
             Y++GVAGWATG+KLG+ES G+    HR +GI +F L T+Q FA+LLRPK DHKYR YWN 
Sbjct:   264 YVIGVAGWATGLKLGNESEGIRFSAHRNIGIALFTLATIQMFAMLLRPKKDHKYRFYWNI 323

Query:   300 YHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGXXXXXXXXXXXXEIFTWALVIKRK 359
             YHH VGYA + L IIN+++G NILKP + +K AY              E  TW +V+KRK
Sbjct:   324 YHHGVGYAILTLGIINVFKGLNILKPQDTYKTAYIAVIAVLGGIALLLEAITWVVVLKRK 383

Query:   360 KSGS 363
              + S
Sbjct:   384 SNNS 387

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2123271 AT4G12980 "AT4G12980" [Arabidopsis thaliana (taxid:3702)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 170/374 (45%), Positives = 237/374 (63%)

Query:     2 ILXXXXXXYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSA 61
             +L       + +CS  +FS  + +  C DLP L A +HY+YD+S+  L + +        
Sbjct:    17 LLLSPAVSQSSSCSSQTFSGVKSYPHCLDLPDLKAILHYSYDASNTTLAVVFSAPPSKPG 76

Query:    62 QWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTS-PITQYQTTLAEGNLAFDVSDLTAT 120
              W++WA+NP   GM GSQALVA + P   + + T+  I  Y ++L    L+FDV D+ A 
Sbjct:    77 GWIAWAINPKSTGMAGSQALVASKDPSTGVASVTTLNIVSY-SSLVPSKLSFDVWDVKAE 135

Query:   121 YANNE---MIIFATLGLQNGTTT---LHQVWQQGP--LSGNVPAIHSTTGPNVQSMGTLN 172
              A N+   + IFA + +         ++QVWQ GP   +G + A H  +GPN+ S+G+L+
Sbjct:   136 EAANDGGALRIFAKVKVPADLAASGKVNQVWQVGPGVSNGRIQA-HDFSGPNLNSVGSLD 194

Query:   173 LFS---GQTATSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWF 229
             L     G   +  GGA NS++ KRNIHG+LNAVSWGLL PIG +IARY+++F+SA PAWF
Sbjct:   195 LTGTTPGVPVSGGGGAGNSRIHKRNIHGILNAVSWGLLFPIGAMIARYMRIFESADPAWF 254

Query:   230 YLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKP 289
             YLHVSCQ SAY++GVAGWATG+KLGSES G+   THR +GI +F + TLQ FA+LLRP+ 
Sbjct:   255 YLHVSCQFSAYVIGVAGWATGLKLGSESKGIQYNTHRNIGICLFSIATLQMFAMLLRPRK 314

Query:   290 DHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTGXXXXXXXXXXXXEI 349
             DHK+R  WN YHH VGY+ +IL IIN+++G +IL P + +K AY              E+
Sbjct:   315 DHKFRFVWNIYHHGVGYSILILGIINVFKGLSILNPKHTYKTAYIAVIGTLGGITLLLEV 374

Query:   350 FTWALVIKRKKSGS 363
              TW +V+KRK + S
Sbjct:   375 VTWVIVLKRKSAKS 388

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2077690 AT3G59070 [Arabidopsis thaliana (taxid:3702)]

 Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
 Identities = 163/361 (45%), Positives = 227/361 (62%)

Query:    14 CSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQ 73
             C  YSF++ + F+SC DL VLN+Y+H+NY   +G LEI Y  + + S+ W+SWA+NPT +
Sbjct:    37 CESYSFNNGKSFRSCTDLLVLNSYLHFNYAQETGVLEIAYHHSNLESSSWISWAINPTSK 96

Query:    74 GMVGSQALVAYRQP-DGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATL 132
             GMVG+QALVAYR    G +RAYTS I  Y   L E  L+  V+ ++A Y+N EM+IFATL
Sbjct:    97 GMVGAQALVAYRNSTSGVMRAYTSSINSYSPMLQESPLSLRVTQVSAEYSNGEMMIFATL 156

Query:   133 GLQNGTTTLHQVWQQGPLS-GNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAANSKLR 191
              L   TT ++ +WQ GPL  G+   +H+ +G N++SM +L+L SGQ  T+     N  L 
Sbjct:   157 VLPPNTTVVNHLWQDGPLKEGDRLGMHAMSGDNLKSMASLDLLSGQVTTTKSVNRNMLLV 216

Query:   192 KRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVG-VAGWATG 250
             K+ IH ++NA+SWG+LMPIGV+ ARY+K ++   P WFY+HV CQ + Y  G + G  T 
Sbjct:   217 KQ-IHAIVNALSWGILMPIGVMAARYMKNYEVLDPTWFYIHVVCQTTGYFSGLIGGLGTA 275

Query:   251 IKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATII 310
             I +   + G+    H  +G+++F LG LQ  +L  RP  DHKYR YWN+YHH++GY  I+
Sbjct:   276 IYMARHT-GMRTTLHTVIGLLLFALGFLQILSLKARPNKDHKYRKYWNWYHHTMGYIVIV 334

Query:   311 LSIINIYRGFNILKPDNKWKQAYTGXXXXXXXXXXXXEIFT----WA-LVIKRKKSGSGD 365
             LSI NIY+G +IL+P + WK AYT             EI      WA L  K+ K    D
Sbjct:   335 LSIYNIYKGLSILQPGSIWKIAYTTIICCIAAFAVVMEILQFKKRWARLFFKKSKDVEAD 394

Query:   366 K 366
             +
Sbjct:   395 Q 395

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2049254 AT2G04850 [Arabidopsis thaliana (taxid:3702)]

 Score = 548 (198.0 bits), Expect = 6.3e-53, P = 6.3e-53
 Identities = 116/360 (32%), Positives = 183/360 (50%)

Query:    20 SSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQG-MVGS 78
             ++ + F+ C  LP   A I + Y   +  L++ +  T +S + WV W +NP     M GS
Sbjct:    29 TATKSFEKCISLPTQQASIAWTYHPHNATLDLCFFGTFISPSGWVGWGINPDSPAQMTGS 88

Query:    79 QALVAYRQP------------DGKIRAYTSPITQYQTTLAE--GNLAFDVSDLTATYANN 124
             + L+A+  P            D  ++    P+      L     + A       AT  N 
Sbjct:    89 RVLIAFPDPNSGQLILLPYVLDSSVKLQKGPLLSRPLDLVRLSSSSASLYGGKMATIRNG 148

Query:   125 EMI-IFATLGLQNGTTTLHQVWQQGP-LSGNVPAIHSTTGPNVQSMGTLNLFSG-QTATS 181
               + I+A++ L +  T +H VW +G  + G  P IH TT  ++ S  T ++ SG  T   
Sbjct:   149 ASVQIYASVKLSSNNTKIHHVWNRGLYVQGYSPTIHPTTSTDLSSFSTFDVTSGFATVNQ 208

Query:   182 SGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYI 241
             + G+   K+     HGV+NA+SWG L+P G + ARYL+  +S GP WFY+H + QL+ ++
Sbjct:   209 NSGSRALKVT----HGVVNAISWGFLLPAGAVTARYLRQMQSIGPTWFYIHAAIQLTGFL 264

Query:   242 VGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYH 301
             +G  G++ GI LG  S GV    HR+LGI  F    LQ  ALL RPK  +K+R YW  YH
Sbjct:   265 LGTIGFSIGIVLGHNSPGVTYGLHRSLGIATFTAAALQTLALLFRPKTTNKFRRYWKSYH 324

Query:   302 HSVGYATIILSIINIYRGFNILKPDNKW-KQAYTGXXXXXXXXXXXXEIFTWALVIKRKK 360
             H VGYA +++ ++N+++GF +L+    + K  Y              E+ +W +  ++ K
Sbjct:   325 HFVGYACVVMGVVNVFQGFEVLREGRSYAKLGYCLCLSTLVGVCVAMEVNSWVVFCRKAK 384

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2156559 AT5G48750 [Arabidopsis thaliana (taxid:3702)]

 Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
 Identities = 98/221 (44%), Positives = 149/221 (67%)

Query:    13 TCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTE 72
             +C  ++F++ + F+SC DLPVL++++HY+Y   +G LE+ YR T + S+ W++W +NPT 
Sbjct:    33 SCDSHNFNNGKHFRSCVDLPVLDSFLHYSYVRETGVLEVAYRHTNIESSSWIAWGINPTS 92

Query:    73 QGMVGSQALVAYRQP-DGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFAT 131
             +GM+G+Q L+AYR    G +RAYTS I  Y   L EG L+F V+ L+A Y N EM IFAT
Sbjct:    93 KGMIGAQTLLAYRNSTSGFMRAYTSSINGYTPMLQEGPLSFRVTQLSAEYLNREMTIFAT 152

Query:   132 LGLQNGTTTLHQVWQQGPLS-GNVPAIHSTTGPNVQSMGTLNLFSGQTATSSGGAANSKL 190
             +   + TT ++ +WQ GPL  G+   +H+ +G +++SM  L+L SGQ  T+     N  L
Sbjct:   153 MVWPSNTTVVNHLWQDGPLKEGDRLGMHAMSGNHLKSMANLDLLSGQVMTTKAANDNMLL 212

Query:   191 RKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYL 231
              K +IHG++NAV WG+ +PIGV+ ARY++ +K   P WFY+
Sbjct:   213 VK-SIHGLVNAVCWGIFIPIGVMAARYMRTYKGLDPTWFYI 252

GO:0005886 "plasma membrane" evidence=ISM

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0016020 "membrane" evidence=ISS

GO:0030198 "extracellular matrix organization" evidence=ISS

TAIR|locus:2091097 AT3G07570 [Arabidopsis thaliana (taxid:3702)]

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 87/274 (31%), Positives = 136/274 (49%)

Query:    71 TEQGMVGSQALVAYRQPDG---KIRAYT----SP----ITQYQTTLAEGNLAFDVSDLTA 119
             T   M+GS A+V +   DG    ++ Y     SP      Q   T+  G+L  + S  + 
Sbjct:    88 TNGQMIGSSAIVGWIPSDGGSGTVKPYLLGGKSPGEVNPDQGDLTIVNGSLKIE-SVSSR 146

Query:   120 TYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLNLFSGQTA 179
              Y   ++   ATL  Q+    L+ V   G    + P         V +  T+N  +G  +
Sbjct:   147 LYMRFQLT--ATLPRQS---LLYAVGPAGFFPSS-PDFRLREHRFVTTT-TINYNTGSQS 199

Query:   180 TSSGGAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSA 239
                  + +SKL+K   HG++N   WG+L+ +G I+AR++K +    P WFY H++ Q + 
Sbjct:   200 VVKV-SPHSKLKKT--HGLMNMFGWGILIIVGAIVARHMKQWD---PTWFYAHIALQTTG 253

Query:   240 YIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNF 299
             +++G+ G   G+ L +      +  H+ LGI I  +G LQ  ALL RP    KYR YWN+
Sbjct:   254 FLLGLTGVICGLVLENRLKANNVSKHKGLGITILVMGVLQMLALLARPDKQSKYRKYWNW 313

Query:   300 YHHSVGYATIILSIINIYRGFNILKPDNKWKQAY 333
             YHH++G   IIL+I NI+ G ++ K    W   Y
Sbjct:   314 YHHNIGRLLIILAISNIFYGIHLAKAGTSWNGGY 347

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2076770 AT3G61750 [Arabidopsis thaliana (taxid:3702)]

 Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 85/307 (27%), Positives = 138/307 (44%)

Query:    58 VSSAQWVSWA-VNPTEQG-MVGSQALVAYRQPDG--KIRAYTSPITQY-QTTLAEGNLAF 112
             VS+     W  +  +++G MVGS A++ +    G  KI+ Y    T+  Q    +G L  
Sbjct:    82 VSALYTTGWVGIGFSKEGRMVGSSAMIGWISKKGHAKIKQYYLQGTERDQVVPDQGEL-- 139

Query:   113 DVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLSGNVPAIHSTTGPNVQSMGTLN 172
              +  +    A +  +I+    ++             P    + A  ST  P+   +G L 
Sbjct:   140 QLQKVPPVVALHGAMIYLAFQVKFAVRV--------PRRAVILAF-STAYPS--KLGRLT 188

Query:   173 LFSGQTA-----TSSGGAANSKLR---KRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSA 224
                 +T      + + GA + K     ++  HGV+  + WG L+P+G I+ARYL+  K  
Sbjct:   189 KHDDKTTVIVDFSKASGATSIKTTTSTEKTKHGVMAILGWGFLLPVGAILARYLR-HKD- 246

Query:   225 GPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALL 284
              P W+YLH+  Q + +I G+A    GI+L +  +   +  HR +GI +  L TLQ  A  
Sbjct:   247 -PLWYYLHIGFQFTGFIFGLAAVILGIQLYNR-IQPDIPAHRGIGIFLLVLSTLQVLAFF 304

Query:   285 LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNIL-KPDNKWKQAYTGXXXXXXXX 343
              RP+ + K R YWN+YHH +G  ++    +NI  G  +     + WK  Y          
Sbjct:   305 ARPQKETKMRRYWNWYHHWIGRISLFFGAVNIVLGIRMADNGGDGWKIGYGFVLSVTLLA 364

Query:   344 XXXXEIF 350
                 EIF
Sbjct:   365 FVVLEIF 371

GO:0005576 "extracellular region" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	383
cd09629	152	cd09629, DOMON_CIL1_like, DOMON-like domain of Bra	2e-65
cd08760	191	cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrom	2e-55
pfam04526	101	pfam04526, DUF568, Protein of unknown function (DU	3e-40
smart00665	129	smart00665, B561, Cytochrome b-561 / ferric reduct	3e-36
smart00664	148	smart00664, DoH, Possible catecholamine-binding do	2e-14
cd08554	131	cd08554, Cyt_b561, Eukaryotic cytochrome b(561)	0.001

>gnl|CDD|187687 cd09629, DOMON_CIL1_like, DOMON-like domain of Brassica carinata CIL1 and similar proteins

 Score =  204 bits (522), Expect = 2e-65
 Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 1/150 (0%)

Query: 25  FKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAY 84
           F +CNDLP L A +H+ Y++S+  L++ +R T  SS+ WV+W +NPT  GMVG+QALVA+
Sbjct: 1   FAACNDLPTLGASLHWTYNASNSTLDVAFRATPPSSSGWVAWGINPTGTGMVGTQALVAF 60

Query: 85  RQPDGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQV 144
           R  +G +  YT  IT Y        L+FDVSDL+A Y+  EM IFATL L +  T+++ V
Sbjct: 61  RNSNGSVLVYTYNITSYTKLGEPLPLSFDVSDLSAEYSGGEMTIFATLKLPSNLTSVNHV 120

Query: 145 WQQGP-LSGNVPAIHSTTGPNVQSMGTLNL 173
           WQ GP ++G  P  H T+G N+ S GTL+L
Sbjct: 121 WQVGPAVTGGSPGPHPTSGANLASKGTLDL 150

Brassica carinata CIL1 has been described as involved in suppression of axillary meristem development. It contains a single DOMON domain, the function of which is unclear. Members in this diverse family of plant proteins may have a cytochrome b561 domain C-terminal to the DOMON domain, some members from Arabidopsis have been characterized as auxin-responsive or auxin-induced proteins. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases. Length = 152

>gnl|CDD|176490 cd08760, Cyt_b561_FRRS1_like, Eukaryotic cytochrome b(561), including the FRRS1 gene product

 Score =  180 bits (459), Expect = 2e-55
 Identities = 72/193 (37%), Positives = 101/193 (52%), Gaps = 12/193 (6%)

Query: 166 QSMGTLNLFSGQTATSSGGAAN-------SKLRKRNIHGVLNAVSWGLLMPIGVIIARYL 218
           +S  +L+L SG +++              S       HGVL A++WG+LMPIG ++ARY 
Sbjct: 2   KSSYSLDLASGTSSSGGSPFLLPNGSSVGSSDTLIKAHGVLMAIAWGILMPIGALLARY- 60

Query: 219 KVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTL 278
             F    P WFYLH   QL A ++ +AG+  GI L     G +   H  LGI++  L  L
Sbjct: 61  --FLLGDPVWFYLHAGLQLLAVLLAIAGFVLGIVLVQGGGGSLNNAHAILGIIVLALAIL 118

Query: 279 QAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKP--DNKWKQAYTGC 336
           Q    LLRP P  K R  WN+ H  +G A +IL+I+NI+ G ++        WK AY   
Sbjct: 119 QPLLGLLRPHPGSKKRSIWNWAHRWLGRAALILAIVNIFLGLDLAGAGTPKAWKIAYGVV 178

Query: 337 IIVLVCVAVVLEI 349
           + VL  V ++LEI
Sbjct: 179 VAVLALVYLILEI 191

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. Length = 191

>gnl|CDD|191019 pfam04526, DUF568, Protein of unknown function (DUF568)

 Score =  137 bits (348), Expect = 3e-40
 Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 2/101 (1%)

Query: 75  MVGSQALVAYRQPD-GKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLG 133
           MVGSQALVA+R    G +R YTS I+ Y T+L EG L+FDV DL+A  +N E+ IFATL 
Sbjct: 1   MVGSQALVAFRDSSSGAVRVYTSNISSYSTSLQEGPLSFDVPDLSAEESNGEVTIFATLK 60

Query: 134 LQNGTTTLHQVWQQGPLS-GNVPAIHSTTGPNVQSMGTLNL 173
           L   TT ++QVWQ GP+  G  P IH T+G N++SMGTL+L
Sbjct: 61  LPANTTKVNQVWQVGPVVTGGSPGIHPTSGDNLRSMGTLDL 101

Family of uncharacterized plant proteins. Length = 101

>gnl|CDD|214769 smart00665, B561, Cytochrome b-561 / ferric reductase transmembrane domain

 Score =  128 bits (323), Expect = 3e-36
 Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 5/130 (3%)

Query: 195 IHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLG 254
           +H VL  + +G LM   +++AR L     + P WF LHV  Q+ A ++GV G        
Sbjct: 1   LHPVLMILGFGFLMGEAILVARPL-TRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISH 59

Query: 255 SESVGVVLKT-HRTLGIVIFCLGTLQAFALLLRPKPD---HKYRIYWNFYHHSVGYATII 310
           +ES      + H  LG+  F L  LQ  +  LRP P     KYR Y N YH  VG A  I
Sbjct: 60  NESGIANFYSLHSWLGLAAFVLAGLQWLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFI 119

Query: 311 LSIINIYRGF 320
           L+I+ I+ G 
Sbjct: 120 LAIVTIFLGL 129

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders. Length = 129

>gnl|CDD|214768 smart00664, DoH, Possible catecholamine-binding domain present in a variety of eukaryotic proteins

 Score = 69.8 bits (171), Expect = 2e-14
 Identities = 28/144 (19%), Positives = 54/144 (37%), Gaps = 15/144 (10%)

Query: 34  LNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRA 93
            + ++ ++ D     +         S+  WV+   +P  Q M G+  +VA+   +G++  
Sbjct: 2   CDYFLSWSVDGE-NSIAFEL-SGPTSTNGWVAIGFSPDGQ-MAGADVVVAWVDNNGRVTV 58

Query: 94  YTSPITQYQTTLAEGNLAFDVSDL-TATYANNEMIIFATLGLQ--------NGTTTLHQV 144
                  Y   +   +   DV+DL +ATY N  +       L             T+H +
Sbjct: 59  KDYYTPGYGPPV--EDDQQDVTDLLSATYENGVLTCRFRRKLGSNDPDDKSLLDGTVHVL 116

Query: 145 WQQGPL-SGNVPAIHSTTGPNVQS 167
           W +GPL        H  +  + + 
Sbjct: 117 WAKGPLSPNGGLGYHDFSLKSTKK 140

A predominantly beta-sheet domain present as a regulatory N-terminal domain in dopamine beta-hydroxylase, mono-oxygenase X and SDR2. Its function remains unknown at present (Ponting, Human Molecular Genetics, in press). Length = 148

>gnl|CDD|176489 cd08554, Cyt_b561, Eukaryotic cytochrome b(561)

 Score = 38.4 bits (90), Expect = 0.001
 Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 6/131 (4%)

Query: 194 NIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKL 253
           N H +L  + +  LM   +++ R  ++      A   LH    L A+++G+ G       
Sbjct: 3   NWHPLLMVIGFVFLMGEALLVYRVFRLLTK--RALKLLHAILHLLAFVLGLVGLLAVFLF 60

Query: 254 GSESVGVVLKT-HRTLGIVIFCLGTLQ---AFALLLRPKPDHKYRIYWNFYHHSVGYATI 309
            +      L + H  LG+    L  LQ    F L L P     YR     +H   G A  
Sbjct: 61  HNAGGIANLYSLHSWLGLATVLLFLLQFLSGFVLFLLPLLRLSYRSSLLPFHRFFGLAIF 120

Query: 310 ILSIINIYRGF 320
           +L+I  I  G 
Sbjct: 121 VLAIATILLGI 131

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous. Length = 131

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	383
KOG4293	403	consensus Predicted membrane protein, contains DoH	100.0
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	99.97
smart00665	129	B561 Cytochrome b-561 / ferric reductase transmemb	99.92
PF03188	137	Cytochrom_B561: Eukaryotic cytochrome b561; InterP	99.88
cd08554	131	Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome	99.86
smart00664	148	DoH Possible catecholamine-binding domain present	99.85
cd08766	144	Cyt_b561_ACYB-1_like Plant cytochrome b(561), incl	99.83
cd08761	183	Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561	99.82
PLN02351	242	cytochromes b561 family protein	99.82
cd08764	214	Cyt_b561_CG1275_like Non-vertebrate eumetazoan cyt	99.81
cd08762	179	Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYB	99.8
PLN02810	231	carbon-monoxide oxygenase	99.79
cd08765	153	Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBR	99.79
PLN02680	232	carbon-monoxide oxygenase	99.78
PF03351	124	DOMON: DOMON domain; InterPro: IPR005018 The DOMON	99.77
cd08763	143	Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB5	99.76
KOG1619	245	consensus Cytochrome b [Energy production and conv	99.74
PF04526	101	DUF568: Protein of unknown function (DUF568); Inte	99.51
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	99.35
cd00241	184	CDH_cytochrome Cellobiose dehydrogenase (Cellobios	99.34
KOG3568	603	consensus Dopamine beta-monooxygenase [Amino acid	99.05
PF13301	175	DUF4079: Protein of unknown function (DUF4079)	96.55
cd08764	214	Cyt_b561_CG1275_like Non-vertebrate eumetazoan cyt	96.24
smart00665	129	B561 Cytochrome b-561 / ferric reductase transmemb	96.23
cd08554	131	Cyt_b561 Eukaryotic cytochrome b(561). Cytochrome	96.18
cd08766	144	Cyt_b561_ACYB-1_like Plant cytochrome b(561), incl	96.11
cd08760	191	Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561),	96.09
PF03188	137	Cytochrom_B561: Eukaryotic cytochrome b561; InterP	95.95
cd08763	143	Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB5	95.88
cd08761	183	Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561	95.68
cd08762	179	Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYB	95.6
PLN02680	232	carbon-monoxide oxygenase	95.34
PLN02810	231	carbon-monoxide oxygenase	94.24
cd08765	153	Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBR	93.38
PLN02351	242	cytochromes b561 family protein	93.18
KOG1619	245	consensus Cytochrome b [Energy production and conv	93.06
PF00033	188	Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; I	91.55
COG2717	209	Predicted membrane protein [Function unknown]	89.5
PF10348	105	DUF2427: Domain of unknown function (DUF2427); Int	89.46
PF10067	103	DUF2306: Predicted membrane protein (DUF2306); Int	88.9
PF08507	136	COPI_assoc: COPI associated protein; InterPro: IPR	84.85
PF13172	34	PepSY_TM_1: PepSY-associated TM helix	84.73
PF00033	188	Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; I	84.35
COG5658	204	Predicted integral membrane protein [Function unkn	84.11
PF13301	175	DUF4079: Protein of unknown function (DUF4079)	83.79
PF10951	347	DUF2776: Protein of unknown function (DUF2776); In	83.37
PF15099	129	PIRT: Phosphoinositide-interacting protein family	82.59

>KOG4293 consensus Predicted membrane protein, contains DoH and Cytochrome b-561/ferric reductase transmembrane domains [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-40  Score=326.58  Aligned_cols=350  Identities=44%  Similarity=0.820  Sum_probs=288.1

Q ss_pred             ccccCCCCccccCcccccccccCCCCceEEEEEEeCCCCeEEEEEEEecCCCCCeEEEEEcCCCCCCCCCcEEEEEEcC-
Q 047145            9 SYAQTCSKYSFSSNRVFKSCNDLPVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQP-   87 (383)
Q Consensus         9 ~~~~~C~~~~~~~~~~y~~c~~l~~~~~~l~W~~~~~~~~i~i~~~~~~~~~~GWVA~Gfs~~g~~M~gad~vI~~~~~-   87 (383)
                      ++.+.|.+++++.++.|+.|.++|+++..++++++.+++.+++.|....  ...|++++++|++.+|.++.+++++.+. 
T Consensus        20 ~~~~~C~~~~~~~~~~~~~c~~lp~~~~~i~~~~~~~~~~~~i~~~~~~--~~~w~~~~~~p~~t~m~~~~~~va~~~~~   97 (403)
T KOG4293|consen   20 SQTDTCSSQTFNIDKSFDSCVDLPTLNSFIHYTYNSANGVLSIAFSAPL--SSAWVAWAINPTGTGMVGSRALVAYAGSS   97 (403)
T ss_pred             hhhcceeeeeccCCccccccccCCCCCceEEEEEecCCCeEEEEEecCC--cccccccccCCccccccccceeeeeeccc
Confidence            3334799999999999999999999999999999988999999998854  4459999999999779999999999975 


Q ss_pred             CCcEEEEEeecccccccccCCCceeeeccccEEEeCCE---EEEEEEeccC-CCCcceeEEEeeCCCC--CCCCCCCCCC
Q 047145           88 DGKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNE---MIIFATLGLQ-NGTTTLHQVWQQGPLS--GNVPAIHSTT  161 (383)
Q Consensus        88 ~G~v~v~~~~~~g~~~p~~~~~~~~~l~~~s~~~~~g~---~~~~~~~~l~-~~~~~~~~IwA~G~~~--~~~l~~H~~~  161 (383)
                      +|...+..++..++.+-.......+++.+....++...   ..+|++.+++ .+...++.+|+.|+..  +..+.+|...
T Consensus        98 ~g~~~~~t~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~l~~~~~~~~~~~w~~~~~~~~g~~~~~h~~~  177 (403)
T KOG4293|consen   98 SGATTVKTYVILGYSPSLVPALLSFTLGNVRAECNLRSSSPIGIFASFKLAGANGGKYSAVWQVGPTGSGGGRPKRHKLS  177 (403)
T ss_pred             cchhhceeeeecccchhhcccccceeeecCcchhhccCCCCceEEEEEEeecCCCceeEEEEEccCCccCCCCCccCccc
Confidence            67778888888887542222223344444443333222   6778887777 4567889999999875  6788999998


Q ss_pred             CCCCccceeeeecc--CCccccCCC-CCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHH
Q 047145          162 GPNVQSMGTLNLFS--GQTATSSGG-AANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLS  238 (383)
Q Consensus       162 ~~n~~~~~~ldl~~--g~~~~~~~~-~~~~~~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~  238 (383)
                      +.+......+|+..  |.......+ .......+...||++|.++|++++|+|++.+||+|..+...+.||++|+.+|..
T Consensus       178 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~hgil~~~sw~il~p~g~i~ary~~~~~~~~~~Wfy~H~~~~~~  257 (403)
T KOG4293|consen  178 GSNLASVTSLDLTSDIGELSITSEGNFNSSGLKLRMTHGILNALSWGILFPAGAIIARYLRQKPSGDPTWFYIHRACQFT  257 (403)
T ss_pred             cCCccceeecccccccccccccccCcccCcchhccccHHHHhhhhhheeccccceeEEEecccCCCCcchhhhhhhheee
Confidence            77665666667765  222211100 112334566679999999999999999999999999876789999999999999


Q ss_pred             HHHHHHHHHhhhhhhcccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHHHHHHHHHHHHHHH
Q 047145          239 AYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYR  318 (383)
Q Consensus       239 ~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~  318 (383)
                      ++++.+.|++.+....+++.+..+..|..+|+.++++.++|++..++||.++++.|++||++|+..||..+++|++|++.
T Consensus       258 ~~~~~~~~~~~g~~~~~~s~~~~~~~h~~~G~~~~~l~~lQ~~~~l~Rp~~~~k~R~~~nwyH~~~g~~~~~~~~~~i~~  337 (403)
T KOG4293|consen  258 GFILGVAGFVDGLKLSNESDGTVYSAHTDLGIILLVLAFLQPLALLLRPLPESKIRRYWNWYHHLVGRLSIILGIVNIFD  337 (403)
T ss_pred             EEEEEeeeeeeeEEEccCCCceeeeecccchhHHHHHHHHHHHHHHhcCCcccCceeccceeeeecCcceeeehhhHHhh
Confidence            99999999999988887776677789999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCCCcccc-hhHHHHHHHHHHHHHHHHHHHhhHhhhccc
Q 047145          319 GFNILKPDNKWK-QAYTGCIIVLVCVAVVLEIFTWALVIKRKK  360 (383)
Q Consensus       319 Gl~~~~~~~~~~-~~~~~~~~~~~~~~v~lei~~w~~~~~~~~  360 (383)
                      |+.+.++...|. +.|+.+.+++.++.+++|+..|+...+|.+
T Consensus       338 ~~~l~~~~~~w~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~  380 (403)
T KOG4293|consen  338 GLELLYPGQSWIKLGYGSILAVLGLIAVILEILSWRITIERPS  380 (403)
T ss_pred             hHhhhcCCCceEEeeeeeEEEEechhhhhhhhheeeeeecccC
Confidence            999999998898 799999999999999999999887776665

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=99.97  E-value=1.8e-31  Score=241.69  Aligned_cols=179  Identities=39%  Similarity=0.709  Sum_probs=151.8

Q ss_pred             cceeeeeccCCccccCC-------CCCCccchhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHH
Q 047145          167 SMGTLNLFSGQTATSSG-------GAANSKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSA  239 (383)
Q Consensus       167 ~~~~ldl~~g~~~~~~~-------~~~~~~~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~  239 (383)
                      ++.++|+++|++++...       +.....+..+++||++|++||++++|+|++++||++.   +++.||++|+.+|+++
T Consensus         3 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~Hg~lm~iaw~~l~p~gil~ar~~~~---~~~~~~~~H~~~q~~~   79 (191)
T cd08760           3 SSYSLDLASGTSSSGGSPFLLPNGSSVGSSDTLIKAHGVLMAIAWGILMPIGALLARYFLL---GDPVWFYLHAGLQLLA   79 (191)
T ss_pred             cceEEEeccceeccCCCcccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCchhHHHHHHHHHHH
Confidence            45678888876652111       0112346789999999999999999999999999743   4689999999999999


Q ss_pred             HHHHHHHHhhhhhhcccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHc
Q 047145          240 YIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRG  319 (383)
Q Consensus       240 ~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~G  319 (383)
                      ++++++|+++++..........++.|+++|+++++++++|++.+++||.+..+.|++|+++|+++|++++++|++|+++|
T Consensus        80 ~~~~i~g~~~~~~~~~~~~~~~~~~H~~lGl~~~~l~~lQ~~~G~~~~~~~~~~R~~~~~~H~~~G~~~~~l~~v~i~~G  159 (191)
T cd08760          80 VLLAIAGFVLGIVLVQGGGGSLNNAHAILGIIVLALAILQPLLGLLRPHPGSKKRSIWNWAHRWLGRAALILAIVNIFLG  159 (191)
T ss_pred             HHHHHHHHHHHHHhhccCCCCCcCcchhhhHHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999887511122347899999999999999999999999999888899999999999999999999999999


Q ss_pred             ccccCCC--cccchhHHHHHHHHHHHHHHHH
Q 047145          320 FNILKPD--NKWKQAYTGCIIVLVCVAVVLE  348 (383)
Q Consensus       320 l~~~~~~--~~~~~~~~~~~~~~~~~~v~le  348 (383)
                      +.+.+.+  +.+.++|.+++++..++.+++|
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  190 (191)
T cd08760         160 LDLAGAGTPKAWKIAYGVVVAVLALVYLILE  190 (191)
T ss_pred             HHHhcCCcccchhhHHHHHHHHHHHHHHHHc
Confidence            9999887  7888899999988888888776

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain

Probab=99.92  E-value=2.8e-25  Score=188.70  Aligned_cols=124  Identities=38%  Similarity=0.626  Sum_probs=110.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHh-hhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC-CccccccchhhHHH
Q 047145          195 IHGVLNAVSWGLLMPIGVIIARY-LKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV-GVVLKTHRTLGIVI  272 (383)
Q Consensus       195 ~Hg~lm~~aw~~l~P~gil~aR~-~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~lG~~~  272 (383)
                      +||++|.+||++++|+|++++|+ .+..  +++.||++|+.+|+++++++++|+++++...++.+ ...+++|+++|+++
T Consensus         1 ~H~~lm~~~f~~l~p~gil~~r~~~~~~--~~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~~~~~~~~~~s~H~~lGl~~   78 (129)
T smart00665        1 LHPVLMILGFGFLMGEAILVARPLTRFL--SKPTWFLLHVVLQILALVLGVIGLLAIFISHNESGIANFYSLHSWLGLAA   78 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHhhhHhhcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCCccchhHHHHHHH
Confidence            69999999999999999999997 3332  57899999999999999999999999988766532 22368999999999


Q ss_pred             HHHHHHHhhhheeccCCC---CCcceeeeehhHHHHHHHHHHHHHHHHHcc
Q 047145          273 FCLGTLQAFALLLRPKPD---HKYRIYWNFYHHSVGYATIILSIINIYRGF  320 (383)
Q Consensus       273 ~~l~~~Q~l~~~~rp~~~---~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl  320 (383)
                      +++.++|++.|++||.++   .+.|..++++|+++|++++++|++|+++|+
T Consensus        79 ~~l~~~Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~~~~lG~  129 (129)
T smart00665       79 FVLAGLQWLSGFLRPLPPGLPSKYRSYLNPYHRFVGLAAFILAIVTIFLGL  129 (129)
T ss_pred             HHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence            999999999998887765   677899999999999999999999999986

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.

>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []

Probab=99.88  E-value=1.9e-22  Score=172.90  Aligned_cols=126  Identities=28%  Similarity=0.489  Sum_probs=108.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccC--CCccccccchhhHHH
Q 047145          195 IHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSES--VGVVLKTHRTLGIVI  272 (383)
Q Consensus       195 ~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~--~~~~~~~H~~lG~~~  272 (383)
                      +|+++|++||++++|.|++++|+.+..+.+++.|+++|..+|+++++++++|+++++...++.  +++ +++|+++|+++
T Consensus         1 ~H~~lm~~~f~~l~~~~il~~r~~~~~~~~~~~~~~~H~~lq~l~~~~~~~G~~~~~~~~~~~~~~h~-~s~H~~lG~~~   79 (137)
T PF03188_consen    1 WHPILMTIGFVFLMPEGILAARYNPFRRKSRKWWFRIHWILQVLALVFAIIGFVAIFINKNRNGKPHF-KSWHSILGLAT   79 (137)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC-CCchhhhhHHH
Confidence            699999999999999999999974421235788999999999999999999999998866542  344 68999999999


Q ss_pred             HHHHHHHhhhheec---cCCCCCcceeeeehhHHHHHHHHHHHHHHHHHccc
Q 047145          273 FCLGTLQAFALLLR---PKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFN  321 (383)
Q Consensus       273 ~~l~~~Q~l~~~~r---p~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~  321 (383)
                      ++++++|++.|+++   |.++.+.|+.++++|+++|++++++|++|+.+|+.
T Consensus        80 ~~l~~~Q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~~i~~G~~  131 (137)
T PF03188_consen   80 FVLALLQPLLGFFRFFMPGLPRKRRPIWNKWHRWLGYLIYVLAIATIFLGLT  131 (137)
T ss_pred             HHHHHHHHHHHHHHHccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999877753   55566678889999999999999999999999995

It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane

>cd08554 Cyt_b561 Eukaryotic cytochrome b(561)

Probab=99.86  E-value=3.2e-22  Score=170.31  Aligned_cols=125  Identities=23%  Similarity=0.334  Sum_probs=109.0

Q ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccC--CCccccccchhhH
Q 047145          193 RNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSES--VGVVLKTHRTLGI  270 (383)
Q Consensus       193 ~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~--~~~~~~~H~~lG~  270 (383)
                      +++|+++|.+||++++|.|++++|++|..  .++.|+++|+.+|++++++.++|+++++...++.  +++ ++.|+++|+
T Consensus         2 f~~H~~lm~~g~~~l~~~~il~~r~~~~~--~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~~~~~~~h~-~s~Hs~lGl   78 (131)
T cd08554           2 FNWHPLLMVIGFVFLMGEALLVYRVFRLL--TKRALKLLHAILHLLAFVLGLVGLLAVFLFHNAGGIANL-YSLHSWLGL   78 (131)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhcccccc--chhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcccc-hhHHHHHHH
Confidence            57999999999999999999999998765  4678999999999999999999999998876432  233 689999999


Q ss_pred             HHHHHHHHHhhhhee---ccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHcc
Q 047145          271 VIFCLGTLQAFALLL---RPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGF  320 (383)
Q Consensus       271 ~~~~l~~~Q~l~~~~---rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl  320 (383)
                      +++++.++|++.|+.   .|.+..+.|..++++|+++|+++++++++++++|+
T Consensus        79 ~~~~l~~~q~~~G~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~la~~t~~~G~  131 (131)
T cd08554          79 ATVLLFLLQFLSGFVLFLLPLLRLSYRSSLLPFHRFFGLAIFVLAIATILLGI  131 (131)
T ss_pred             HHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            999999999987764   35554446889999999999999999999999985

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.

>smart00664 DoH Possible catecholamine-binding domain present in a variety of eukaryotic proteins

Probab=99.85  E-value=4.9e-20  Score=159.92  Aligned_cols=136  Identities=20%  Similarity=0.358  Sum_probs=109.2

Q ss_pred             CceEEEEEEeCCCCeEEEEEEEecCCCCCeEEEEEcCCCCCCCCCcEEEEEEcCCCcEEEEEeecccccccccCCCceee
Q 047145           34 LNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTLAEGNLAFD  113 (383)
Q Consensus        34 ~~~~l~W~~~~~~~~i~i~~~~~~~~~~GWVA~Gfs~~g~~M~gad~vI~~~~~~G~v~v~~~~~~g~~~p~~~~~~~~~  113 (383)
                      +++.++|+++.+ ++++|+++++.. +.||+|||||+++. |.|+|+++|+.+++|++.+.|+|++|+..|..|...+..
T Consensus         2 ~~~~l~W~~~~~-~~v~~~l~~~~~-~~gwvaiGfs~~~~-M~~~d~vv~~~~~~g~~~v~d~~~~~~~~~~~d~~~~~~   78 (148)
T smart00664        2 CDYFLSWSVDGE-NSIAFELSGPTS-TNGWVAIGFSPDGQ-MAGADVVVAWVDNNGRVTVKDYYTPGYGPPVEDDQQDVT   78 (148)
T ss_pred             ceEEEEEEECCC-CeEEEEEEEecC-CCCEEEEEECCCCC-cCCCCEEEEEEcCCCCEEEEEEEcCCCCCCCcCcccccc
Confidence            468999999855 888888877642 38999999999865 999999999998779999999999999988766554432


Q ss_pred             eccccEEEeCCEEEEEEEeccCCCC--------cceeEEEeeCCC-CCCCCCCCCCCCCCCccceeeeeccC
Q 047145          114 VSDLTATYANNEMIIFATLGLQNGT--------TTLHQVWQQGPL-SGNVPAIHSTTGPNVQSMGTLNLFSG  176 (383)
Q Consensus       114 l~~~s~~~~~g~~~~~~~~~l~~~~--------~~~~~IwA~G~~-~~~~l~~H~~~~~n~~~~~~ldl~~g  176 (383)
                      .. .++.+++|.++|+|+|++.+++        .+.+++||.|+. .++.+.+|...   ..+..++++.+.
T Consensus        79 ~~-~~~~~~~g~~~~~f~R~l~t~d~~d~~~~~~~~~~i~a~G~~~~~~~~~~H~~~---~~~~~~i~~~~~  146 (148)
T smart00664       79 DL-LSATYENGVLTCRFRRKLGSNDPDDKSLLDGTVHVLWAKGPLSPNGGLGYHDFS---LKSTKKVCLSSC  146 (148)
T ss_pred             cc-eeEEEECCEEEEEEEEEccCCCccccccCCCeEEEEEEECCCCCCCCeeecccc---ccCceEEEeccC
Confidence            22 1567899999999999998865        367899999983 36779999875   246778888754

A predominantly beta-sheet domain present as a regulatory N-terminal domain in dopamine beta-hydroxylase, mono-oxygenase X and SDR2. Its function remains unknown at present (Ponting, Human Molecular Genetics, in press).

>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

Probab=99.83  E-value=7.5e-21  Score=163.13  Aligned_cols=131  Identities=21%  Similarity=0.187  Sum_probs=112.0

Q ss_pred             cchhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC-Cccccccch
Q 047145          189 KLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV-GVVLKTHRT  267 (383)
Q Consensus       189 ~~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~  267 (383)
                      ...++++|++||.++|.++++.|+++.|..|.   .++.|.++|+.+|.+++++.++|++.++...++.+ ...++.|+|
T Consensus         4 ~~~~Fn~HP~lM~~gfi~l~~eAiL~~r~~~~---~k~~~k~iH~~l~~la~~~~vvGl~avf~~~~~~~~~~~~SlHSw   80 (144)
T cd08766           4 KGLIFNVHPVLMVIGFIFLAGEAILAYKTVPG---SREVQKAVHLTLHLVALVLGIVGIYAAFKFHNEVGIPNLYSLHSW   80 (144)
T ss_pred             CcceeeccHHHHHHHHHHHHHHHHHHhhcccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccCccccccHHHH
Confidence            44789999999999999999999999886553   46677899999999999999999999888765432 124789999


Q ss_pred             hhHHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHcccc
Q 047145          268 LGIVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNI  322 (383)
Q Consensus       268 lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~  322 (383)
                      +|++++++..+|.+.|+   +.|....+.|....++|+++|+++++++++++.+|+..
T Consensus        81 lGl~t~~L~~lQ~~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~~~la~~t~~lGl~e  138 (144)
T cd08766          81 LGIGTISLFGLQWLFGFVTFWFPGASRNTRAALLPWHVFLGLAIYYLAIATAETGLLE  138 (144)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987664   57876555678888899999999999999999999864

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product

Probab=99.82  E-value=1.9e-20  Score=168.36  Aligned_cols=132  Identities=22%  Similarity=0.205  Sum_probs=109.2

Q ss_pred             chhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcc-cCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccC--CCccccccc
Q 047145          190 LRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFK-SAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSES--VGVVLKTHR  266 (383)
Q Consensus       190 ~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~-~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~--~~~~~~~H~  266 (383)
                      +.++++|+++|+++|++++|+|++..|-.+... .+++.|+++|+.+|.++++++++|+++++...++.  +++ ++.|+
T Consensus        18 ~~~f~~Hp~~m~i~~~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~~~~~~~~~hf-~s~H~   96 (183)
T cd08761          18 TSLFSWHPLLMSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYNKERNGKPHF-TSWHG   96 (183)
T ss_pred             cceeehhHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc-cchhH
Confidence            467999999999999999999999755322110 24678899999999999999999999888765432  234 68999


Q ss_pred             hhhHHHHHHHHHHhhhhee---ccCCCC--CcceeeeehhHHHHHHHHHHHHHHHHHcccc
Q 047145          267 TLGIVIFCLGTLQAFALLL---RPKPDH--KYRIYWNFYHHSVGYATIILSIINIYRGFNI  322 (383)
Q Consensus       267 ~lG~~~~~l~~~Q~l~~~~---rp~~~~--~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~  322 (383)
                      ++|++++++.++|++.|+.   +|....  ++|+.++++|+++|++++++|++|+.+|+..
T Consensus        97 ~lGl~~~~l~~~Q~~~G~~~~~~~~~~~~~~~r~~~~~~H~~~G~~~~~l~~~t~~lGl~~  157 (183)
T cd08761          97 ILGLVTVILIVLQALGGLALLYPPGLRRGESKAKKLKKYHRLSGYVAYLLGLATLVLGLET  157 (183)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHhhHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            9999999999999987763   443332  5788899999999999999999999999987

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PLN02351 cytochromes b561 family protein

Probab=99.82  E-value=3.9e-20  Score=169.15  Aligned_cols=155  Identities=18%  Similarity=0.109  Sum_probs=122.4

Q ss_pred             hhh-hhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC--Cccccccch
Q 047145          191 RKR-NIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV--GVVLKTHRT  267 (383)
Q Consensus       191 ~~~-~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~--~~~~~~H~~  267 (383)
                      ..+ ++|++||.++|+++++.||++.|.+|.   .++.|+.+|..+|.++++++++|+..  ...++.+  ...++.|+|
T Consensus        48 ~iffn~HP~lMviGfi~L~geAILvYR~~~~---~~k~~K~lH~~Lh~~Ali~~vvGl~a--~fh~~~~~i~nlySLHSW  122 (242)
T PLN02351         48 LVYAVLHPLLMVIGFILISGEAILVHRWLPG---SRKTKKSVHLWLQGLALASGVFGIWT--KFHGQDGIVANFYSLHSW  122 (242)
T ss_pred             ceeecccHHHHHHHHHHHHHHHHHHhhcccc---cchHHHHHHHHHHHHHHHHHHHHHHH--HHhcccCCccchhHHHHH
Confidence            355 799999999999999999999998764   35568999999999999999999998  3333221  124799999


Q ss_pred             hhHHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHccccc------C------CCcccchh
Q 047145          268 LGIVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNIL------K------PDNKWKQA  332 (383)
Q Consensus       268 lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~------~------~~~~~~~~  332 (383)
                      +|++++++..+|.+.|+   +.|......|....++|.++|+.+++++++++.+|+...      +      ++++..+.
T Consensus       123 lGl~tv~Lf~lQwv~Gf~~F~~P~~~~~~Ra~~~P~Hv~~Gl~if~LaiaTa~lGl~EKl~F~~~~~~y~~~~~Ea~lvN  202 (242)
T PLN02351        123 MGLICVSLFGAQWLTGFMSFWHRGEMRTTRTTVLPWHVFLGLYTYGLAVATAETGLLEKLTFLQTKRNVSKHGSESMVVN  202 (242)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccCCchhhhHH
Confidence            99999999999987555   456666667888889999999999999999999999653      1      13445556


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 047145          333 YTGCIIVLVCVAVVLEIF  350 (383)
Q Consensus       333 ~~~~~~~~~~~~v~lei~  350 (383)
                      .++++.+++++.|++.+.
T Consensus       203 ~~Glliv~fG~~Vv~~~~  220 (242)
T PLN02351        203 GLGLGLALLSGIVILAAV  220 (242)
T ss_pred             HHHHHHHHHHHHHHHhhc
Confidence            777777777666666543

>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561)

Probab=99.81  E-value=5.4e-20  Score=167.19  Aligned_cols=158  Identities=19%  Similarity=0.185  Sum_probs=125.0

Q ss_pred             chhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccC--C-Cccccccc
Q 047145          190 LRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSES--V-GVVLKTHR  266 (383)
Q Consensus       190 ~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~--~-~~~~~~H~  266 (383)
                      ...+++|+++|.+++.++++.|+++.|.+|..  .++.|+.+|..+|.++++++++|+..++...++.  + ...++.|+
T Consensus        21 ~~~Fn~HP~lM~~Gfi~l~geAiLvyr~~~~~--~k~~~k~~H~~L~~lAl~~~ivGl~avf~~hn~~~~~~~hfySlHS   98 (214)
T cd08764          21 GLQFNWHPLLMVLGLIFLYGNSILVYRVFRNT--RKKRLKLLHAVLHLLAFILAVIGLKAVFDSHNLAKPPIPNMYSLHS   98 (214)
T ss_pred             CceEeecHHHHHHHHHHHHHHHHHHhccCccc--cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHH
Confidence            35789999999999999999999999987753  3556778999999999999999998887765443  1 12379999


Q ss_pred             hhhHHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHccccc--------C--CCcccchhH
Q 047145          267 TLGIVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNIL--------K--PDNKWKQAY  333 (383)
Q Consensus       267 ~lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~--------~--~~~~~~~~~  333 (383)
                      |+|++++++..+|.+.|+   +.|......|....++|+++|+++++++++++.+|+...        +  ++.+....+
T Consensus        99 wlGl~t~~L~~lQ~~~Gf~~fl~P~~~~~~r~~~~p~H~~~Gl~~fvLaiaT~~lGl~ek~~f~~~~~~~~~~e~~l~N~  178 (214)
T cd08764          99 WLGLTAVILFSLQWVGGFVSFLFPGLPETLRAAYLPLHVFFGLFIFVLAVATALLGITEKAFFSLNKYSNLPAEGVLGNF  178 (214)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCChhHHHHHH
Confidence            999999999999987664   567755556777777999999999999999999999662        1  133445566


Q ss_pred             HHHHHHHHHHHHHHHH
Q 047145          334 TGCIIVLVCVAVVLEI  349 (383)
Q Consensus       334 ~~~~~~~~~~~v~lei  349 (383)
                      ++++.++.++.|++.+
T Consensus       179 ~gl~~~~fg~~V~~~~  194 (214)
T cd08764         179 IGIVLVIFGGLVVYLV  194 (214)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            7777666666665544

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product

Probab=99.80  E-value=1.2e-19  Score=159.42  Aligned_cols=132  Identities=23%  Similarity=0.220  Sum_probs=112.5

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC-Cccccccchhh
Q 047145          191 RKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV-GVVLKTHRTLG  269 (383)
Q Consensus       191 ~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~lG  269 (383)
                      +.+++|+++|.++|++++..++++.|..+..+.++..|+++|..+|.++++++++|+..++..+++.+ ...++.|+|+|
T Consensus        33 ~~Fn~HP~lMv~Gfi~L~geAiL~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vvGl~avf~~hn~~~~~nlySlHSWlG  112 (179)
T cd08762          33 KNFNWHPVLMVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVFNFHNVHHTANLYSLHSWVG  112 (179)
T ss_pred             CceeehHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccchhhHHHHHH
Confidence            37999999999999999999999988665543345668899999999999999999999998876542 12368999999


Q ss_pred             HHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHcccc
Q 047145          270 IVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNI  322 (383)
Q Consensus       270 ~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~  322 (383)
                      ++++++..+|.+.|+   +.|....+.|....++|+++|+.+++++++++.+|+..
T Consensus       113 l~t~~Lf~lQ~~~Gf~~f~~p~~~~~~ra~~~p~H~~~G~~if~Laiat~~lGl~e  168 (179)
T cd08762         113 ICTVALFTCQWVMGFTSFLLPWAPMWLRALVKPIHVFFGAMILVLSIASCISGINE  168 (179)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987655   45665656788889999999999999999999999975

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PLN02810 carbon-monoxide oxygenase

Probab=99.79  E-value=4.7e-19  Score=160.81  Aligned_cols=157  Identities=22%  Similarity=0.175  Sum_probs=127.7

Q ss_pred             chhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC-Cccccccchh
Q 047145          190 LRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV-GVVLKTHRTL  268 (383)
Q Consensus       190 ~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~l  268 (383)
                      +..+++|++||.++|+++...||++.|.++.   .++.++.+|..+|.++++++++|+...+..+++.+ ...++.|+|+
T Consensus        44 ~~~FN~HPvlMv~Gfi~l~geAIL~Yr~~~~---~k~~~K~iH~~lh~~Al~l~vvGl~Avf~~Hn~~~i~nlySLHSWl  120 (231)
T PLN02810         44 NLIFNLHPVLMLIGLIIIGGEAIMSYKSLPL---KKEVKKLIHLVLHAIALILGIFGICAAFKNHNESGIANLYSLHSWL  120 (231)
T ss_pred             CceeeehHHHHHHHHHHHhhHHHHHhhcccc---ccchHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCceeeHHHHH
Confidence            4589999999999999999999999876653   34567899999999999999999999998876542 1247999999


Q ss_pred             hHHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHccccc----CC-------CcccchhHH
Q 047145          269 GIVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNIL----KP-------DNKWKQAYT  334 (383)
Q Consensus       269 G~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~----~~-------~~~~~~~~~  334 (383)
                      |++++++..+|.+.|+   +.|......|....++|.++|..+++++++++.+|+...    +.       +.+..+.++
T Consensus       121 Gl~tv~Lf~lQw~~Gf~~Fl~P~~~~~~R~~~lP~Hv~~Gl~if~LAiata~lGi~EKl~Fl~~~~~~~~~~Ea~lvN~~  200 (231)
T PLN02810        121 GIGIISLYGIQWIYGFIVFFFPGGSTNLRSGSLPWHVLFGLFVYILAVGNAALGFLEKLTFLESGGLDKYGSEALLVNFT  200 (231)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCchhhhHHHH
Confidence            9999999999987655   578777667888889999999999999999999999663    11       334455677


Q ss_pred             HHHHHHHHHHHHHHH
Q 047145          335 GCIIVLVCVAVVLEI  349 (383)
Q Consensus       335 ~~~~~~~~~~v~lei  349 (383)
                      +++.++.++.+++.+
T Consensus       201 Glliv~fg~~V~~~~  215 (231)
T PLN02810        201 AIITILYGAFVVLTA  215 (231)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            777776766666644

>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product

Probab=99.79  E-value=2.4e-19  Score=154.68  Aligned_cols=132  Identities=17%  Similarity=0.164  Sum_probs=112.3

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC-Cccccccchhh
Q 047145          191 RKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV-GVVLKTHRTLG  269 (383)
Q Consensus       191 ~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~lG  269 (383)
                      ..+++|++||.+++.+++..+|++.|..+..+..++.+.++|+.+|.+++++.++|++..+...++.+ ...+++|+|+|
T Consensus        10 ~~Fn~HPlLm~~Gfi~l~geAiL~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i~Gl~avf~~hn~~~~~~fySlHSwlG   89 (153)
T cd08765          10 AEFNWHPVLMVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVFVFHNAKNIPNMYSLHSWVG   89 (153)
T ss_pred             CeeechHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCccccHHHHHH
Confidence            57899999999999999999999987654433346677899999999999999999999888765542 12379999999


Q ss_pred             HHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHcccc
Q 047145          270 IVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNI  322 (383)
Q Consensus       270 ~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~  322 (383)
                      ++++++..+|.+.|+   +.|....+.|....++|+++|+++++++++++.+|+..
T Consensus        90 l~t~~l~~lQ~~~Gf~~f~~P~~~~~~r~~~~p~H~~~G~~i~~Lai~t~~lG~~e  145 (153)
T cd08765          90 LAAVILYPLQLVLGISVYLLPVAPVRLRAALMPLHVYSGLFIFGTVIATALMGITE  145 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987655   46776556788899999999999999999999999864

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me

>PLN02680 carbon-monoxide oxygenase

Probab=99.78  E-value=5.6e-19  Score=161.52  Aligned_cols=159  Identities=20%  Similarity=0.164  Sum_probs=125.5

Q ss_pred             cchhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC-Cccccccch
Q 047145          189 KLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV-GVVLKTHRT  267 (383)
Q Consensus       189 ~~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~  267 (383)
                      +..++++|++||.+++.+++..++++.|..|   ..++.+..+|..+|.+++++.++|+...+..+++.+ ...++.|+|
T Consensus        43 ~~~~Fn~HPlLM~~Gfi~l~geAIL~yr~~~---~~k~~~K~iH~~L~~lA~~l~vvGl~avfk~hn~~~~~nfySlHSW  119 (232)
T PLN02680         43 KDLIFNVHPVLMVIGLVLLNGEAMLAYKTVP---GTKNLKKLVHLTLQFLAFCLSLIGVWAALKFHNEKGIDNFYSLHSW  119 (232)
T ss_pred             CcceEechHHHHHHHHHHHHHHHHhcccccc---ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCccccccHHHH
Confidence            3468999999999999999999999966544   346677889999999999999999999888776542 123799999


Q ss_pred             hhHHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHccccc----C-C-------Ccccchh
Q 047145          268 LGIVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNIL----K-P-------DNKWKQA  332 (383)
Q Consensus       268 lG~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~----~-~-------~~~~~~~  332 (383)
                      +|++++++..+|.+.|+   +.|......|+...++|+++|+++++++++++.+|+...    . +       +++..+.
T Consensus       120 lGl~t~iL~~lQ~~~Gf~~f~~P~~~~~~R~~~~p~H~~~G~~if~LaiaT~~lG~~Ek~~f~~~~~~~~~~~~e~~lvN  199 (232)
T PLN02680        120 LGLACLFLFSLQWAAGFVTFWYPGGSRNSRASLLPWHVFFGIYIYALAVATATTGILEKATFLQSNKVISRYSTEAMLVN  199 (232)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccCCCCchhhhHh
Confidence            99999999999987554   567655556676779999999999999999999999652    1 1       2334556


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 047145          333 YTGCIIVLVCVAVVLEIF  350 (383)
Q Consensus       333 ~~~~~~~~~~~~v~lei~  350 (383)
                      .++++.+++++.+++.+.
T Consensus       200 ~~gl~~~~fg~~V~~~v~  217 (232)
T PLN02680        200 SLGILIVVLGGFVILAIV  217 (232)
T ss_pred             HHHHHHHHHHHHHHHhhc
Confidence            666666666666666544

>PF03351 DOMON: DOMON domain; InterPro: IPR005018 The DOMON domain is an 110-125 residue long domain which has been identified in the physiologically important enzyme dopamine beta-monooxygenase and in several other secreted and transmembrane proteins from both plants and animals

Probab=99.77  E-value=1.2e-17  Score=140.33  Aligned_cols=111  Identities=19%  Similarity=0.303  Sum_probs=90.8

Q ss_pred             CCceEEEEEEeCCCCeEEEEEEEecCCCCCeEEEEEcCCCCCCCCCcEEEEEEcCCCcEEEEEee-cccccccccCCC--
Q 047145           33 VLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSP-ITQYQTTLAEGN--  109 (383)
Q Consensus        33 ~~~~~l~W~~~~~~~~i~i~~~~~~~~~~GWVA~Gfs~~g~~M~gad~vI~~~~~~G~v~v~~~~-~~g~~~p~~~~~--  109 (383)
                      .+++.|+|+++.++++++|++++... ..||+|+|||++++ |.++|+++|+.+ +|++++.|+| ..++..|..|..  
T Consensus         2 ~~~~~l~w~~~~~~~~i~~~l~~~~~-~~~w~aiGfs~~~~-M~~~Dvv~~~~~-~~~~~v~d~~~~~~~~~p~~d~~~~   78 (124)
T PF03351_consen    2 DCNFSLSWTVDGDNNTIEFELTGPAN-TNGWVAIGFSDDGG-MGGSDVVVCWVD-DGKVYVQDYYSTGGYGPPTVDDQGS   78 (124)
T ss_pred             CceEEEEEEEECCCCEEEEEEEeccC-CCCEEEEEEccccC-CCCCcEEEEEEc-CCceeEEEeeccCcccceeeccccC
Confidence            45789999999777777666665432 38999999999877 999999999998 6999999999 999988888843  


Q ss_pred             ceeeeccccEEEeCCEEEEEEEeccCCCC---------cceeEEEeeC
Q 047145          110 LAFDVSDLTATYANNEMIIFATLGLQNGT---------TTLHQVWQQG  148 (383)
Q Consensus       110 ~~~~l~~~s~~~~~g~~~~~~~~~l~~~~---------~~~~~IwA~G  148 (383)
                      +++.+..  +.++++.++|.|+|++.+.+         .+.++|||+|
T Consensus        79 ~~~~~~~--~~~~~g~~~~~F~R~l~t~d~~d~~l~~~~~~~~i~A~G  124 (124)
T PF03351_consen   79 QDIQLLS--GSYSNGTTTCSFTRPLNTGDSQDYDLDSNGTYYVIWAYG  124 (124)
T ss_pred             CcEEEEE--EEEECCEEEEEEEEEccCCCCCccEecCCCcEEEEEEeC
Confidence            5555544  56789999999999998842         4678999987

It has been named after DOpamine beta-MOnooxygenase N-terminal domain. The DOMON domain can be found in one to four copies and in association with other domains, such as the Cu-ascorbate dependent monooxygenase domain, the epidermal growth factor domain, the trypsin inhibitor-like domain (TIL), the SEA domain and the Reelin domain. The architectures of the DOMON domain proteins strongly suggest a function in extracellular adhesion []. The sequence conservation is predominantly centred around patches of hydrophobic residues. The secondary structure prediction of the DOMON domain points to an all-beta-strand fold with seven or eight core strands supported by a buried core of conserved hydrophobic residues. There is a chraracteristic motif with two small positions (Gly or Ser) corresponding to a conserved turn immediately C-terminal to strand three. It has been proposed that the DOMON domain might form a beta-sandwich structure, with the strands distributed into two beta sheets as is seen in many extracellular adhesion domains such as the immunoglobulin, fibronectin type III, cadherin and PKD domains [].

>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product

Probab=99.76  E-value=1.3e-18  Score=149.12  Aligned_cols=130  Identities=18%  Similarity=0.164  Sum_probs=111.2

Q ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC-Cccccccchhh
Q 047145          191 RKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV-GVVLKTHRTLG  269 (383)
Q Consensus       191 ~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~lG  269 (383)
                      ..+++|+++|++++.+++..++++.|..+..  .++.+.++|+.+|.+++++.++|+...+...++.+ ...++.|+|+|
T Consensus         5 ~~Fn~HP~lm~~G~i~l~geaiL~~~~~~~~--~k~~~k~~H~~L~~la~~~~~~Gl~av~~~h~~~~~~hf~SlHswlG   82 (143)
T cd08763           5 LQFNVHPLCMVLGLVFLCGEALLVYRVFRNE--TKRSTKILHGLLHIMALVISLVGLVAVFDYHQANGYPDMYSLHSWCG   82 (143)
T ss_pred             cccchhHHHHHHHHHHHHHHHHHHhcccccc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCccccHHHHHH
Confidence            3899999999999999999999998866543  35666789999999999999999999887665432 12379999999


Q ss_pred             HHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHcccc
Q 047145          270 IVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNI  322 (383)
Q Consensus       270 ~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~  322 (383)
                      ++++++..+|.+.|+   +.|....+.|..++++|+++|+++++++++++.+|+..
T Consensus        83 l~t~~L~~lQ~~~G~~~f~~P~~~~~~r~~~~p~H~~~G~~~f~la~~t~~lG~~e  138 (143)
T cd08763          83 ILTFVLYFLQWLIGFSFFLFPGASFTLRSQYKPLHEFFGRALFLSSVGTSLLGLTE  138 (143)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999987664   46776666789999999999999999999999999864

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>KOG1619 consensus Cytochrome b [Energy production and conversion]

Probab=99.74  E-value=8.1e-19  Score=158.74  Aligned_cols=132  Identities=20%  Similarity=0.245  Sum_probs=113.9

Q ss_pred             chhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCC-Cccccccchh
Q 047145          190 LRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESV-GVVLKTHRTL  268 (383)
Q Consensus       190 ~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~-~~~~~~H~~l  268 (383)
                      +..+++|+++|.++|+++.-.++++.|.+|..  .++.-+-+|..+|+.+++++++|+...+..++... ...++.|+|+
T Consensus        52 ~~~fnlHP~lMviGfI~l~GeAiL~YR~~r~~--~k~~~KliH~~LH~~Alvl~i~gl~avf~~hn~~~i~NfySLHSWl  129 (245)
T KOG1619|consen   52 NKEFNLHPVLMVIGFIYLQGEAILIYRVFRYT--SKKVSKLIHLGLHIIALVLAIIGLCAVFDSHNLVGIANFYSLHSWL  129 (245)
T ss_pred             chhcCcchHHHHHHHHHhccceeeeeehhhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccceeeHHHHH
Confidence            57899999999999999999999999998875  34455679999999999999999999988776542 1247999999


Q ss_pred             hHHHHHHHHHHhhhhe---eccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHccccc
Q 047145          269 GIVIFCLGTLQAFALL---LRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNIL  323 (383)
Q Consensus       269 G~~~~~l~~~Q~l~~~---~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~  323 (383)
                      |++++++..+|.+.||   +.|.-..+.|....++|+.+|..+++++++|+.+|+...
T Consensus       130 Gl~~v~ly~~Q~v~GF~tfl~pg~~~~~Rs~lmP~H~~~Gl~~f~lai~ta~~Gl~ek  187 (245)
T KOG1619|consen  130 GLCVVILYSLQWVFGFFTFLFPGSPESYRSRLMPWHVFLGLAIFILAIVTALTGLLEK  187 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCCccHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999986544   577777788999999999999999999999999999543

>PF04526 DUF568: Protein of unknown function (DUF568); InterPro: IPR017214 This group represents an uncharacterised conserved protein

Probab=99.51  E-value=1.3e-13  Score=110.87  Aligned_cols=99  Identities=52%  Similarity=0.861  Sum_probs=91.7

Q ss_pred             CCCCcEEEEEEcCC-CcEEEEEeecccccccccCCCceeeeccccEEEeCCEEEEEEEeccCCCCcceeEEEeeCCCC-C
Q 047145           75 MVGSQALVAYRQPD-GKIRAYTSPITQYQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNGTTTLHQVWQQGPLS-G  152 (383)
Q Consensus        75 M~gad~vI~~~~~~-G~v~v~~~~~~g~~~p~~~~~~~~~l~~~s~~~~~g~~~~~~~~~l~~~~~~~~~IwA~G~~~-~  152 (383)
                      |.|+.++|++.+.+ |.+.+..|.++++.++...+.+++++.+.+++++++.++||++.+|+.+.++++++|+.|+.. +
T Consensus         1 M~GtqALvAf~~~~~G~~~v~T~~i~sy~~~l~~~~lsf~v~~lsae~~~~~~~IfAtl~Lp~n~t~vnhVWQ~G~~v~g   80 (101)
T PF04526_consen    1 MVGTQALVAFKNSNGGSVTVYTYNITSYSPSLQPGPLSFDVSDLSAEYSGGEMTIFATLKLPGNSTSVNHVWQVGPSVQG   80 (101)
T ss_pred             CCCceEEEEEeCCCCceEEEEEEeecccccccccccccccccceEeEEeCCEEEEEEEEEcCCCCcEEEEEeCcCCccCC
Confidence            99999999999987 889999999999987666667888999999999999999999999999999999999999988 8


Q ss_pred             CCCCCCCCCCCCCccceeeee
Q 047145          153 NVPAIHSTTGPNVQSMGTLNL  173 (383)
Q Consensus       153 ~~l~~H~~~~~n~~~~~~ldl  173 (383)
                      +.+..|+..+.|+.+..+|||
T Consensus        81 g~p~~H~~~~~Nl~S~gtldl  101 (101)
T PF04526_consen   81 GSPQPHPTSGANLQSKGTLDL  101 (101)
T ss_pred             CccccCCCCCccccceEEecC
Confidence            999999999999999999997

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=99.35  E-value=3.2e-12  Score=104.13  Aligned_cols=88  Identities=19%  Similarity=0.346  Sum_probs=75.9

Q ss_pred             ccchhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcccCCCc-cccccc
Q 047145          188 SKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGV-VLKTHR  266 (383)
Q Consensus       188 ~~~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~-~~~~H~  266 (383)
                      ..+....+|+++|.++|++++|+|+++.+. |      .   ++|.++|++.++++++|+.++....++.+++ .++.|.
T Consensus        13 ~~~~~l~~Hi~lm~la~~il~Pi~lvL~~~-~------s---r~~~~~q~~~~~l~~~g~~~g~~~~~~~p~lyp~n~H~   82 (105)
T PF10348_consen   13 PHRSALYAHIVLMTLAWVILYPIGLVLGNA-R------S---RWHLPVQTVFLVLMILGLFLGSVYNGSTPDLYPNNAHG   82 (105)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHc-c------c---hHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence            456789999999999999999999998653 2      1   3599999999999999999998887776664 678999


Q ss_pred             hhhHHHHHHHHHHhhhhee
Q 047145          267 TLGIVIFCLGTLQAFALLL  285 (383)
Q Consensus       267 ~lG~~~~~l~~~Q~l~~~~  285 (383)
                      ++|+++++++++|++.+++
T Consensus        83 k~g~il~~l~~~q~~~gv~  101 (105)
T PF10348_consen   83 KMGWILFVLMIVQVILGVI  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999976654

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

>cd00241 CDH_cytochrome Cellobiose dehydrogenase (CellobioseDH), cytochrome domain; This extracellular fungal oxidoreductase degrades both lignin and cellulose

Probab=99.34  E-value=2.5e-11  Score=108.27  Aligned_cols=134  Identities=15%  Similarity=0.118  Sum_probs=97.2

Q ss_pred             CCceEEEEEEeCC---CCeEEEEEEEecCCCCCeEEEEEcCCCCCCCCCcEEEEEEcCCCcEEEEEeeccccccc-ccCC
Q 047145           33 VLNAYIHYNYDSS---SGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTT-LAEG  108 (383)
Q Consensus        33 ~~~~~l~W~~~~~---~~~i~i~~~~~~~~~~GWVA~Gfs~~g~~M~gad~vI~~~~~~G~v~v~~~~~~g~~~p-~~~~  108 (383)
                      ..++.+.+.+-.+   ++.-+|+++++.|.+.||+|+|.   |.+|.++.++|+|+++ ++|+++.|+.+||.+| .+++
T Consensus        21 ~~~itfgialP~~a~s~~~~d~i~qi~aP~~~gW~gls~---Gg~M~~~~L~vaw~~g-~~Vt~S~R~atg~~~P~~y~g   96 (184)
T cd00241          21 VHDVTYGIVLPPDALGADSTEFIGELVAPRASGWIGLAL---GGAMTNSLLLVAWPNG-NQIVSSTRYATGYTLPDAYTG   96 (184)
T ss_pred             CCCeEEEEEcCCcccCCCCCCEEEEEeCcCCCCeEEEee---cccCCCCeEEEEEcCC-CeEEEeEEEecCccCCCccCC
Confidence            3456665555322   23458899999998899999998   6679999999999975 4599999999999988 4566


Q ss_pred             CceeeeccccEEEeCCEE----EEEEEeccCCC-C----cceeEEEeeCCC---C----CCCCCCCCCCCCCCccceeee
Q 047145          109 NLAFDVSDLTATYANNEM----IIFATLGLQNG-T----TTLHQVWQQGPL---S----GNVPAIHSTTGPNVQSMGTLN  172 (383)
Q Consensus       109 ~~~~~l~~~s~~~~~g~~----~~~~~~~l~~~-~----~~~~~IwA~G~~---~----~~~l~~H~~~~~n~~~~~~ld  172 (383)
                      +..+.++..++ .+++++    +|..|.+++.+ .    ....++||+++.   +    +..+.+|+.     .|.+.+|
T Consensus        97 ~a~~t~L~gs~-vn~t~~t~~~rC~nC~~W~~gg~~~~t~~~~~~wA~~~~~~~~p~~~~a~i~~Hd~-----~G~f~~d  170 (184)
T cd00241          97 PATITQLPSSS-VNSTHWKLVFRCQNCTSWNNGGGIDPTSQGVLAWAFSNVAVDDPSDPQSTFSEHTD-----FGFFGIN  170 (184)
T ss_pred             CceEEECCCCc-EeCCEEEEEEEeCCCcccCCCCccCcCCCceEEEEECCCCCCCCCCcccCCceecC-----CcceeEe
Confidence            66788886554 467776    45556777632 1    223789998522   1    567899984     3679999


Q ss_pred             eccC
Q 047145          173 LFSG  176 (383)
Q Consensus       173 l~~g  176 (383)
                      |...
T Consensus       171 l~~A  174 (184)
T cd00241         171 LSDA  174 (184)
T ss_pred             chhc
Confidence            9854

It is a hemoflavoenzyme that is comprised of a b-type cytochrome domain linked to a large flavodehydrogenase domain. The 2 domains can be separated proteolytically. The cytochrome domain folds as a beta sandwich and complexes a heme molecule.

>KOG3568 consensus Dopamine beta-monooxygenase [Amino acid transport and metabolism]

Probab=99.05  E-value=7.9e-10  Score=108.67  Aligned_cols=133  Identities=11%  Similarity=0.124  Sum_probs=99.4

Q ss_pred             cccccccccC-CCCceEEEEEEeCCCCeEEEEEEEecCCCCCeEEEEEcCCCCCCCCCcEEEEEEcCCCcEEEEEeeccc
Q 047145           22 NRVFKSCNDL-PVLNAYIHYNYDSSSGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQ  100 (383)
Q Consensus        22 ~~~y~~c~~l-~~~~~~l~W~~~~~~~~i~i~~~~~~~~~~GWVA~Gfs~~g~~M~gad~vI~~~~~~G~v~v~~~~~~g  100 (383)
                      ...|++...+ +..+++|+|.++...+.++|.++..   +.+|++||||+.|. |.+||+++.|.+ .+...+.|+|.+.
T Consensus        30 ~s~~~~h~~~~~e~~~~lsW~vdy~~q~i~F~l~~~---t~~~v~fGfSdrG~-lanaDivv~~n~-g~~~~~~DayTn~  104 (603)
T KOG3568|consen   30 GSTYPHHTLLDSEGKYWLSWSVDYRGQQIAFRLQVR---TAGYVGFGFSDRGA-LANADIVVGGNA-GGRPYLQDAYTNA  104 (603)
T ss_pred             CCCccceeeecCCCcEEEEEeeccccceeEEEEEec---cCCEEEEecCCcCC-cccCcEEEEecc-CCchhhhhhhcCC
Confidence            4667777765 4445899999998888877766664   68999999999998 999999999875 4557899999988


Q ss_pred             ccccccCCCceeeeccccEEEeCCEEEEEEEeccCCC--------CcceeEEEeeCCCC--CCCCCCCCCC
Q 047145          101 YQTTLAEGNLAFDVSDLTATYANNEMIIFATLGLQNG--------TTTLHQVWQQGPLS--GNVPAIHSTT  161 (383)
Q Consensus       101 ~~~p~~~~~~~~~l~~~s~~~~~g~~~~~~~~~l~~~--------~~~~~~IwA~G~~~--~~~l~~H~~~  161 (383)
                      ...-..|.++|++|+...  .+...+++.|+|++.+-        +++++++||.-...  +-...+|+..
T Consensus       105 d~qi~~D~QQDyqll~~~--e~~~~~~i~frRkl~TCDp~Dy~i~dgTv~vv~a~~eed~r~l~~v~~~~~  173 (603)
T KOG3568|consen  105 DGQIKKDAQQDYQLLYAM--ENSTHTIIEFRRKLHTCDPNDYSITDGTVRVVWAYLEEDARELGPVYHDSN  173 (603)
T ss_pred             CCceecchhhhhHHHhhh--ccCCccEEEEecccCcCCccceeccCCeEEEEEEEeccchhhccccccccc
Confidence            877777888898887532  33344567899999773        46889999975432  2233445543

>PF13301 DUF4079: Protein of unknown function (DUF4079)

Probab=96.55  E-value=0.013  Score=52.22  Aligned_cols=58  Identities=16%  Similarity=0.173  Sum_probs=35.2

Q ss_pred             cccccchhhHHHHHHHHHHhh-hheeccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHcccc
Q 047145          261 VLKTHRTLGIVIFCLGTLQAF-ALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNI  322 (383)
Q Consensus       261 ~~~~H~~lG~~~~~l~~~Q~l-~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~  322 (383)
                      ..++|.+.|+.++.|+.++.. .-.+.+.+    ++.++..|..++.+++++-.++..+|.+.
T Consensus       113 f~spH~~~Gl~~~~L~~~s~al~~~i~~g~----~~~~R~lHi~lN~~~l~Lf~~q~itG~~i  171 (175)
T PF13301_consen  113 FWSPHLWAGLAVVGLMAFSAALVPQIQKGN----RPWARRLHIYLNSLALLLFAWQAITGWRI  171 (175)
T ss_pred             ccCchHHHHHHHHHHHHHHHHHHHHHccCC----chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356777777777777776643 22222221    23344577777777777777777777654

>cd08764 Cyt_b561_CG1275_like Non-vertebrate eumetazoan cytochrome b(561)

Probab=96.24  E-value=0.06  Score=49.47  Aligned_cols=97  Identities=14%  Similarity=0.050  Sum_probs=63.5

Q ss_pred             CceeeehhhhHHHHHHHHHHHHhhhhhhcccC-CCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHH
Q 047145          226 PAWFYLHVSCQLSAYIVGVAGWATGIKLGSES-VGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSV  304 (383)
Q Consensus       226 ~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~-~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~  304 (383)
                      ...|.+|..+|++++++...=-++.+...... +....-.|..+..+.+++.++=....+-..++..+..+-+.-.|-|+
T Consensus        21 ~~~Fn~HP~lM~~Gfi~l~geAiLvyr~~~~~~k~~~k~~H~~L~~lAl~~~ivGl~avf~~hn~~~~~~~hfySlHSwl  100 (214)
T cd08764          21 GLQFNWHPLLMVLGLIFLYGNSILVYRVFRNTRKKRLKLLHAVLHLLAFILAVIGLKAVFDSHNLAKPPIPNMYSLHSWL  100 (214)
T ss_pred             CceEeecHHHHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcccchHHHH
Confidence            45799999999999976543333333322211 11123489999999998887775444322222211233455689999


Q ss_pred             HHHHHHHHHHHHHHcccc
Q 047145          305 GYATIILSIINIYRGFNI  322 (383)
Q Consensus       305 G~~~~~lg~~~i~~Gl~~  322 (383)
                      |.+++++-..|...|+-.
T Consensus       101 Gl~t~~L~~lQ~~~Gf~~  118 (214)
T cd08764         101 GLTAVILFSLQWVGGFVS  118 (214)
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999999843

Cytochrome b(561), as found in non-vertebrate eumetazoans, similar to the Drosophila melanogaster CG1275 gene product. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>smart00665 B561 Cytochrome b-561 / ferric reductase transmembrane domain

Probab=96.23  E-value=0.04  Score=46.40  Aligned_cols=93  Identities=17%  Similarity=0.191  Sum_probs=61.9

Q ss_pred             ehhhhHHHHHHHHH-HHHhhhhhh-ccc-CCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHHHH
Q 047145          231 LHVSCQLSAYIVGV-AGWATGIKL-GSE-SVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYA  307 (383)
Q Consensus       231 ~H~~~q~~~~~~~i-~g~~l~~~~-~~~-~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~  307 (383)
                      +|..++++++++.. .|..+. .. ... .+......|.++.++.+++.++=...++...+..+  ++.+...|.++|.+
T Consensus         1 ~H~~lm~~~f~~l~p~gil~~-r~~~~~~~~~~~~~~H~~lq~~a~~~~~~g~~~~~~~~~~~~--~~~~~s~H~~lGl~   77 (129)
T smart00665        1 LHPVLMILGFGFLMGEAILVA-RPLTRFLSKPTWFLLHVVLQILALVLGVIGLLAIFISHNESG--IANFYSLHSWLGLA   77 (129)
T ss_pred             CcHHHHHHHHHHHHHHHHHHh-hhHhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC--CCCccchhHHHHHH
Confidence            48999999986544 344433 22 111 11122468999998888877766555543322222  34577889999999


Q ss_pred             HHHHHHHHHHHcccccCCC
Q 047145          308 TIILSIINIYRGFNILKPD  326 (383)
Q Consensus       308 ~~~lg~~~i~~Gl~~~~~~  326 (383)
                      ++++..+|...|+.....+
T Consensus        78 ~~~l~~~Q~~~G~~~~~~~   96 (129)
T smart00665       78 AFVLAGLQWLSGFLRPLPP   96 (129)
T ss_pred             HHHHHHHHHHHHHHHhcCC
Confidence            9999999999999876543

Cytochrome b-561 recycles ascorbate for the generation of norepinephrine by dopamine-beta-hydroxylase in the chromaffin vesicles of the adrenal gland. It is a transmembrane heme protein with the two heme groups being bound to conserved histidine residues. A cytochrome b-561 homologue, termed Dcytb, is an iron-regulated ferric reductase in the duodenal mucosa. Other homologues of these are also likely to be ferric reductases. SDR2 is proposed to be important in regulating the metabolism of iron in the onset of neurodegenerative disorders.

>cd08554 Cyt_b561 Eukaryotic cytochrome b(561)

Probab=96.18  E-value=0.04  Score=46.52  Aligned_cols=93  Identities=17%  Similarity=0.214  Sum_probs=62.7

Q ss_pred             eeehhhhHHHHHHHHHHHHhhhhhhccc-CCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHHHH
Q 047145          229 FYLHVSCQLSAYIVGVAGWATGIKLGSE-SVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYA  307 (383)
Q Consensus       229 f~~H~~~q~~~~~~~i~g~~l~~~~~~~-~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~  307 (383)
                      |..|..++++++++...--++....... .+......|..+.++.+++.++=....+.....  +.+.-+...|.++|.+
T Consensus         2 f~~H~~lm~~g~~~l~~~~il~~r~~~~~~~~~~~~~H~~l~~l~~~~~~~G~~~~~~~~~~--~~~~h~~s~Hs~lGl~   79 (131)
T cd08554           2 FNWHPLLMVIGFVFLMGEALLVYRVFRLLTKRALKLLHAILHLLAFVLGLVGLLAVFLFHNA--GGIANLYSLHSWLGLA   79 (131)
T ss_pred             CCccHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--cCcccchhHHHHHHHH
Confidence            5689999999987554333333333211 111224589999998888877766555543322  2234466789999999


Q ss_pred             HHHHHHHHHHHccccc
Q 047145          308 TIILSIINIYRGFNIL  323 (383)
Q Consensus       308 ~~~lg~~~i~~Gl~~~  323 (383)
                      ++++..+|...|+...
T Consensus        80 ~~~l~~~q~~~G~~~~   95 (131)
T cd08554          80 TVLLFLLQFLSGFVLF   95 (131)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998765

Cytochrome b(561) is a family of endosomal or secretory vesicle-specific electron transport proteins. They are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments. This is an exclusively eukaryotic family. Members of the prokaryotic cytochrome b561 family are not deemed homologous.

>cd08766 Cyt_b561_ACYB-1_like Plant cytochrome b(561), including the carbon monoxide oxygenase ACYB-1

Probab=96.11  E-value=0.067  Score=46.17  Aligned_cols=94  Identities=21%  Similarity=0.125  Sum_probs=62.0

Q ss_pred             CceeeehhhhHHHHHHHHHHHHhhhhhhcccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHH
Q 047145          226 PAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVG  305 (383)
Q Consensus       226 ~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G  305 (383)
                      ...|.+|..+|++++++...=-++.+.....++......|.++=++.+++.++=....+......+  .+-+.-.|-|+|
T Consensus         5 ~~~Fn~HP~lM~~gfi~l~~eAiL~~r~~~~~k~~~k~iH~~l~~la~~~~vvGl~avf~~~~~~~--~~~~~SlHSwlG   82 (144)
T cd08766           5 GLIFNVHPVLMVIGFIFLAGEAILAYKTVPGSREVQKAVHLTLHLVALVLGIVGIYAAFKFHNEVG--IPNLYSLHSWLG   82 (144)
T ss_pred             cceeeccHHHHHHHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccC--ccccccHHHHHH
Confidence            357999999999998665543344444322222222358888888877777666544432211111  233556899999


Q ss_pred             HHHHHHHHHHHHHccc
Q 047145          306 YATIILSIINIYRGFN  321 (383)
Q Consensus       306 ~~~~~lg~~~i~~Gl~  321 (383)
                      .+++++-..|...|+.
T Consensus        83 l~t~~L~~lQ~~~G~~   98 (144)
T cd08766          83 IGTISLFGLQWLFGFV   98 (144)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999999975

Cytochrome b(561), as found in plants, similar to the Arabidopsis thaliana ACYB-1 gene product, a cytochrome b561 isoform localized to the tonoplast. This protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), and might be capable of trans-membrane electron transport from intracellular ascorbate to extracellular ferric chelates. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08760 Cyt_b561_FRRS1_like Eukaryotic cytochrome b(561), including the FRRS1 gene product

Probab=96.09  E-value=0.034  Score=50.11  Aligned_cols=96  Identities=14%  Similarity=-0.008  Sum_probs=64.9

Q ss_pred             CceeeehhhhHHHHHHHHH-HHHhhhhhhcccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHH
Q 047145          226 PAWFYLHVSCQLSAYIVGV-AGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSV  304 (383)
Q Consensus       226 ~~Wf~~H~~~q~~~~~~~i-~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~  304 (383)
                      +..++.|..+|++++.+.. +|..++-......+.+ ...|..+=++.+++.++=...++...   ...+..++..|.++
T Consensus        33 ~~~~~~Hg~lm~iaw~~l~p~gil~ar~~~~~~~~~-~~~H~~~q~~~~~~~i~g~~~~~~~~---~~~~~~~~~~H~~l  108 (191)
T cd08760          33 DTLIKAHGVLMAIAWGILMPIGALLARYFLLGDPVW-FYLHAGLQLLAVLLAIAGFVLGIVLV---QGGGGSLNNAHAIL  108 (191)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh-HHHHHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCcCcchhh
Confidence            4457899999999977654 4555442211111222 35899888877777666654444322   12345577899999


Q ss_pred             HHHHHHHHHHHHHHcccccCC
Q 047145          305 GYATIILSIINIYRGFNILKP  325 (383)
Q Consensus       305 G~~~~~lg~~~i~~Gl~~~~~  325 (383)
                      |.+++++.++|...|+-....
T Consensus       109 Gl~~~~l~~lQ~~~G~~~~~~  129 (191)
T cd08760         109 GIIVLALAILQPLLGLLRPHP  129 (191)
T ss_pred             hHHHHHHHHHHHHHHHhcCCC
Confidence            999999999999999976543

Cytochrome b(561), as found in eukaryotes, similar to and including the human FRRS1 gene product (ferric-chelate reductase 1), also called SDR-2 (stromal cell-derived receptor 2). This family comprises a variety of domain architectures, many of which contain dopamine beta-monooxygenase (DOMON) domains. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PF03188 Cytochrom_B561: Eukaryotic cytochrome b561; InterPro: IPR004877 Cytochrome b561 is a secretory vesicle-specific electron transport protein []

Probab=95.95  E-value=0.023  Score=48.13  Aligned_cols=95  Identities=21%  Similarity=0.170  Sum_probs=66.9

Q ss_pred             ccchhhhhhhHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhhcc--cC----CCcc
Q 047145          188 SKLRKRNIHGVLNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKLGS--ES----VGVV  261 (383)
Q Consensus       188 ~~~~~~~~Hg~lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~--~~----~~~~  261 (383)
                      ++...+.+|.+++.++..... +|+.++-+.|... +.+.....|..+-++++++++.=.++|+....  ..    +...
T Consensus        30 ~~~~~~~~H~~lq~l~~~~~~-~G~~~~~~~~~~~-~~~h~~s~H~~lG~~~~~l~~~Q~~~G~~~~~~~~~~~~~r~~~  107 (137)
T PF03188_consen   30 SRKWWFRIHWILQVLALVFAI-IGFVAIFINKNRN-GKPHFKSWHSILGLATFVLALLQPLLGFFRFFMPGLPRKRRPIW  107 (137)
T ss_pred             ccchHHHHHHHHHHHHHHHHH-HHHHHHHHhcccc-CCCCCCCchhhhhHHHHHHHHHHHHHHHHHHccCCCcccHHHHH
Confidence            445788999999999988776 5555543334332 23445678999999998888887777765321  11    1122


Q ss_pred             ccccchhhHHHHHHHHHHhhhhe
Q 047145          262 LKTHRTLGIVIFCLGTLQAFALL  284 (383)
Q Consensus       262 ~~~H~~lG~~~~~l~~~Q~l~~~  284 (383)
                      ...|.++|.+++++...++..|+
T Consensus       108 ~~~H~~~G~~~~~l~~~~i~~G~  130 (137)
T PF03188_consen  108 NKWHRWLGYLIYVLAIATIFLGL  130 (137)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH
Confidence            35799999999999999987665

It is an integral membrane protein, that binds two haem groups non-covalently. This entry represents the eukaryotic family. Members of the 'bacterial cytochrome b561' family can be found in IPR011577 from INTERPRO.; GO: 0016021 integral to membrane

>cd08763 Cyt_b561_CYB561 Vertebrate cytochrome b(561), CYB561 gene product

Probab=95.88  E-value=0.057  Score=46.55  Aligned_cols=94  Identities=15%  Similarity=0.130  Sum_probs=66.5

Q ss_pred             eeeehhhhHHHHHHHHHHHHhhhhhhcc-cCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHHH
Q 047145          228 WFYLHVSCQLSAYIVGVAGWATGIKLGS-ESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGY  306 (383)
Q Consensus       228 Wf~~H~~~q~~~~~~~i~g~~l~~~~~~-~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~  306 (383)
                      =|.+|..+|++++++...--++.+.... .++......|.++.++.+++.++=....+...+..  ..+-+.-.|-|+|.
T Consensus         6 ~Fn~HP~lm~~G~i~l~geaiL~~~~~~~~~k~~~k~~H~~L~~la~~~~~~Gl~av~~~h~~~--~~~hf~SlHswlGl   83 (143)
T cd08763           6 QFNVHPLCMVLGLVFLCGEALLVYRVFRNETKRSTKILHGLLHIMALVISLVGLVAVFDYHQAN--GYPDMYSLHSWCGI   83 (143)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHcccc--CCCccccHHHHHHH
Confidence            5889999999999877554444443322 12222346999999999998888766554322222  23446779999999


Q ss_pred             HHHHHHHHHHHHccccc
Q 047145          307 ATIILSIINIYRGFNIL  323 (383)
Q Consensus       307 ~~~~lg~~~i~~Gl~~~  323 (383)
                      +++++-..|...|+...
T Consensus        84 ~t~~L~~lQ~~~G~~~f  100 (143)
T cd08763          84 LTFVLYFLQWLIGFSFF  100 (143)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998654

Cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08761 Cyt_b561_CYB561D2_like Eukaryotic cytochrome b(561), including the CYB561D2 gene product

Probab=95.68  E-value=0.039  Score=49.46  Aligned_cols=96  Identities=14%  Similarity=0.190  Sum_probs=65.6

Q ss_pred             CCceeeehhhhHHHHHHHHHHHHhhhhhhccc----CCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeeh
Q 047145          225 GPAWFYLHVSCQLSAYIVGVAGWATGIKLGSE----SVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFY  300 (383)
Q Consensus       225 ~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~----~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~  300 (383)
                      ....|.+|..+|.+++++....-++.+.....    ++......|.++-.+.+++.++=....+..  ++.+.++-++-.
T Consensus        17 ~~~~f~~Hp~~m~i~~~~l~~~~il~~~~~~~~~~~~~~~~~~~H~~l~~la~~~~~~G~~~~~~~--~~~~~~~hf~s~   94 (183)
T cd08761          17 GTSLFSWHPLLMSLGFLLLMTEALLLLQPTSSLTKLARKTKVRLHWILQLLALLCILAGLVAIYYN--KERNGKPHFTSW   94 (183)
T ss_pred             ccceeehhHHHHHHHHHHHHHHHHHHhcCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHh--cccCCCCCccch
Confidence            34578999999999988776544444432111    122224689999998888777665433322  121224556678


Q ss_pred             hHHHHHHHHHHHHHHHHHcccc
Q 047145          301 HHSVGYATIILSIINIYRGFNI  322 (383)
Q Consensus       301 H~~~G~~~~~lg~~~i~~Gl~~  322 (383)
                      |.++|.+++++-++|...|+-.
T Consensus        95 H~~lGl~~~~l~~~Q~~~G~~~  116 (183)
T cd08761          95 HGILGLVTVILIVLQALGGLAL  116 (183)
T ss_pred             hHHHHHHHHHHHHHHHHHhHHH
Confidence            9999999999999999999954

Cytochrome b(561), as found in eukaryotes, similar to and including the human CYB561D2 gene product. CYB561D2 is a candidate tumor suppressor. The protein might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>cd08762 Cyt_b561_CYBASC3 Vertebrate cytochrome b(561), CYBASC3 gene product

Probab=95.60  E-value=0.45  Score=42.43  Aligned_cols=97  Identities=18%  Similarity=0.083  Sum_probs=62.6

Q ss_pred             CCceeeehhhhHHHHHHHHHHHHhhhhhhcc-c--CCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehh
Q 047145          225 GPAWFYLHVSCQLSAYIVGVAGWATGIKLGS-E--SVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYH  301 (383)
Q Consensus       225 ~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~-~--~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H  301 (383)
                      .+..|.+|-.+|++++++.-.=.++.+.... +  ++......|..+=.+.+++.++-....+-..+..+  .+=.--.|
T Consensus        31 ~~~~Fn~HP~lMv~Gfi~L~geAiL~Yr~~~~~~~~k~~~K~~H~~L~~~Al~~~vvGl~avf~~hn~~~--~~nlySlH  108 (179)
T cd08762          31 SSKNFNWHPVLMVTGMVVLYGNAALVYRIPLTWGGPKLPWKLLHAGLLLLAFILTVIGLCAVFNFHNVHH--TANLYSLH  108 (179)
T ss_pred             CCCceeehHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccccC--ccchhhHH
Confidence            3447999999999999877433333333221 1  11122458888888888877776655443222211  12223369


Q ss_pred             HHHHHHHHHHHHHHHHHccccc
Q 047145          302 HSVGYATIILSIINIYRGFNIL  323 (383)
Q Consensus       302 ~~~G~~~~~lg~~~i~~Gl~~~  323 (383)
                      -|+|..++++=..|...|+-..
T Consensus       109 SWlGl~t~~Lf~lQ~~~Gf~~f  130 (179)
T cd08762         109 SWVGICTVALFTCQWVMGFTSF  130 (179)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999998655

Cytochrome b ascorbate-dependent 3, as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-membrane segments.

>PLN02680 carbon-monoxide oxygenase

Probab=95.34  E-value=0.48  Score=44.03  Aligned_cols=94  Identities=18%  Similarity=0.194  Sum_probs=61.9

Q ss_pred             eeeehhhhHHHHHHHHHHHHhhhhhhcccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHHHH
Q 047145          228 WFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYA  307 (383)
Q Consensus       228 Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~  307 (383)
                      =|.+|-.+|++++++...--++.+.....++......|..+=.+.+++.++=....+ +-+.+. .+.-+.-.|-|+|.+
T Consensus        46 ~Fn~HPlLM~~Gfi~l~geAIL~yr~~~~~k~~~K~iH~~L~~lA~~l~vvGl~avf-k~hn~~-~~~nfySlHSWlGl~  123 (232)
T PLN02680         46 IFNVHPVLMVIGLVLLNGEAMLAYKTVPGTKNLKKLVHLTLQFLAFCLSLIGVWAAL-KFHNEK-GIDNFYSLHSWLGLA  123 (232)
T ss_pred             eEechHHHHHHHHHHHHHHHHhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH-Hhcccc-CccccccHHHHHHHH
Confidence            589999999999998654333343332222223345788887777777666554433 222221 133455689999999


Q ss_pred             HHHHHHHHHHHccccc
Q 047145          308 TIILSIINIYRGFNIL  323 (383)
Q Consensus       308 ~~~lg~~~i~~Gl~~~  323 (383)
                      ++++-..|...|+-..
T Consensus       124 t~iL~~lQ~~~Gf~~f  139 (232)
T PLN02680        124 CLFLFSLQWAAGFVTF  139 (232)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999998663

>PLN02810 carbon-monoxide oxygenase

Probab=94.24  E-value=1.9  Score=39.99  Aligned_cols=94  Identities=20%  Similarity=0.078  Sum_probs=62.8

Q ss_pred             CceeeehhhhHHHHHHHHHHHHhhhhhhcccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHH
Q 047145          226 PAWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVG  305 (383)
Q Consensus       226 ~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G  305 (383)
                      +.=|.+|-.+|++++++.-.=-++.+......+......|..+=.+.+++.++-....+-..+.. + .+=+--.|-|+|
T Consensus        44 ~~~FN~HPvlMv~Gfi~l~geAIL~Yr~~~~~k~~~K~iH~~lh~~Al~l~vvGl~Avf~~Hn~~-~-i~nlySLHSWlG  121 (231)
T PLN02810         44 NLIFNLHPVLMLIGLIIIGGEAIMSYKSLPLKKEVKKLIHLVLHAIALILGIFGICAAFKNHNES-G-IANLYSLHSWLG  121 (231)
T ss_pred             CceeeehHHHHHHHHHHHhhHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-C-CCceeeHHHHHH
Confidence            34689999999999887754344444332212223346888888888777776655544222222 2 233455899999


Q ss_pred             HHHHHHHHHHHHHccc
Q 047145          306 YATIILSIINIYRGFN  321 (383)
Q Consensus       306 ~~~~~lg~~~i~~Gl~  321 (383)
                      ..++++=..|-..|+-
T Consensus       122 l~tv~Lf~lQw~~Gf~  137 (231)
T PLN02810        122 IGIISLYGIQWIYGFI  137 (231)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999999993

>cd08765 Cyt_b561_CYBRD1 Vertebrate cytochrome b(561), CYBRD1 gene product

Probab=93.38  E-value=0.86  Score=39.69  Aligned_cols=96  Identities=20%  Similarity=0.157  Sum_probs=60.8

Q ss_pred             CceeeehhhhHHHHHHHHHHHHhhhhhhcc---cCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhH
Q 047145          226 PAWFYLHVSCQLSAYIVGVAGWATGIKLGS---ESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHH  302 (383)
Q Consensus       226 ~~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~---~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~  302 (383)
                      +.=|.+|-.+|++++++.-.=.++.+....   .++......|.++=.+.+++.++=....+-..+..+  .+-+.-.|-
T Consensus         9 ~~~Fn~HPlLm~~Gfi~l~geAiL~yr~~~~~~~~k~~~k~iH~~L~~~a~~~~i~Gl~avf~~hn~~~--~~~fySlHS   86 (153)
T cd08765           9 AAEFNWHPVLMVIGFIFIQGIAIIVYRLPWTWKCSKLLMKLIHAGLHILAFILAIISVVAVFVFHNAKN--IPNMYSLHS   86 (153)
T ss_pred             CCeeechHHHHHHHHHHHHHHHHHHhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHccccC--CCccccHHH
Confidence            445899999999998884322233332110   112223457877777666666655444332222222  344667999


Q ss_pred             HHHHHHHHHHHHHHHHccccc
Q 047145          303 SVGYATIILSIINIYRGFNIL  323 (383)
Q Consensus       303 ~~G~~~~~lg~~~i~~Gl~~~  323 (383)
                      |+|.+++++-..|...|+..+
T Consensus        87 wlGl~t~~l~~lQ~~~Gf~~f  107 (153)
T cd08765          87 WVGLAAVILYPLQLVLGISVY  107 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999998665

Duodenal cytochrome b or ferric-chelate reductase 3, a cytochrome b(561), as found in vertebrates, which might act as a ferric-chelate reductase, catalyzing the reduction of Fe(3+) to Fe(2+), such as associated with the transport of iron from the endosome to the cytoplasm. It is assumed that this protein uses ascorbate as the electron donor. This protein is expressed at the brush border of duodenal enterocytes and may play a role in the uptake of dietary Fe(3+), facilitating its transport into the mucosal cells. It may also be involved in the recycling of extracellular ascorbate in erythrocyte membranes, and act as a ferrireductase in epithelial cells of the respiratory system. Belongs to the cytochrome b(561) family, which are secretory vesicle-specific electron transport proteins. Cytochromes b(561) are integral membrane proteins that bind two heme groups non-covalently, and may have six alpha-helical trans-me

>PLN02351 cytochromes b561 family protein

Probab=93.18  E-value=0.9  Score=42.42  Aligned_cols=94  Identities=13%  Similarity=0.049  Sum_probs=58.4

Q ss_pred             ceeeehhhhHHHHHHHHHHHHhhhhhhcccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHHH
Q 047145          227 AWFYLHVSCQLSAYIVGVAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGY  306 (383)
Q Consensus       227 ~Wf~~H~~~q~~~~~~~i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~  306 (383)
                      ..|.+|-.+|++++++.-.=-++.+.....++......|..+=.+.+++.++-...-+   +......+=+--.|-|+|.
T Consensus        49 iffn~HP~lMviGfi~L~geAILvYR~~~~~~k~~K~lH~~Lh~~Ali~~vvGl~a~f---h~~~~~i~nlySLHSWlGl  125 (242)
T PLN02351         49 VYAVLHPLLMVIGFILISGEAILVHRWLPGSRKTKKSVHLWLQGLALASGVFGIWTKF---HGQDGIVANFYSLHSWMGL  125 (242)
T ss_pred             eeecccHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHHHHHHHHHHHHHHHHHH---hcccCCccchhHHHHHHHH
Confidence            3347999999999987754333444443222222345787776666666554443321   1111111223446999999


Q ss_pred             HHHHHHHHHHHHccccc
Q 047145          307 ATIILSIINIYRGFNIL  323 (383)
Q Consensus       307 ~~~~lg~~~i~~Gl~~~  323 (383)
                      +++++=.+|-..|+-..
T Consensus       126 ~tv~Lf~lQwv~Gf~~F  142 (242)
T PLN02351        126 ICVSLFGAQWLTGFMSF  142 (242)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999999998654

>KOG1619 consensus Cytochrome b [Energy production and conversion]

Probab=93.06  E-value=0.69  Score=42.89  Aligned_cols=94  Identities=20%  Similarity=0.148  Sum_probs=65.0

Q ss_pred             ceeeehhhhHHHHHHHHHHHHhh-hhhh-cccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHH
Q 047145          227 AWFYLHVSCQLSAYIVGVAGWAT-GIKL-GSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSV  304 (383)
Q Consensus       227 ~Wf~~H~~~q~~~~~~~i~g~~l-~~~~-~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~  304 (383)
                      .-|.+|-.+|++|++..- |..+ .+.. ...++....-.|..+=++.+++.++-....+...+..+.  .=+--.|-|+
T Consensus        53 ~~fnlHP~lMviGfI~l~-GeAiL~YR~~r~~~k~~~KliH~~LH~~Alvl~i~gl~avf~~hn~~~i--~NfySLHSWl  129 (245)
T KOG1619|consen   53 KEFNLHPVLMVIGFIYLQ-GEAILIYRVFRYTSKKVSKLIHLGLHIIALVLAIIGLCAVFDSHNLVGI--ANFYSLHSWL  129 (245)
T ss_pred             hhcCcchHHHHHHHHHhc-cceeeeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc--cceeeHHHHH
Confidence            458899999999988653 4333 2233 222333345689999999999888877666643333331  2244589999


Q ss_pred             HHHHHHHHHHHHHHccccc
Q 047145          305 GYATIILSIINIYRGFNIL  323 (383)
Q Consensus       305 G~~~~~lg~~~i~~Gl~~~  323 (383)
                      |..++++=.+|-..|+--+
T Consensus       130 Gl~~v~ly~~Q~v~GF~tf  148 (245)
T KOG1619|consen  130 GLCVVILYSLQWVFGFFTF  148 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998655

>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes

Probab=91.55  E-value=0.35  Score=42.67  Aligned_cols=92  Identities=21%  Similarity=0.187  Sum_probs=59.3

Q ss_pred             ehhhhHHHHHHHHHHHHhhhhh----hcccC-CCccccccchhhHHHHHHHHHHhhhheec-------------------
Q 047145          231 LHVSCQLSAYIVGVAGWATGIK----LGSES-VGVVLKTHRTLGIVIFCLGTLQAFALLLR-------------------  286 (383)
Q Consensus       231 ~H~~~q~~~~~~~i~g~~l~~~----~~~~~-~~~~~~~H~~lG~~~~~l~~~Q~l~~~~r-------------------  286 (383)
                      +|+..-++-+++.+.|+.+...    ..... .......|..+|++.+++.++..+..+.+                   
T Consensus        11 ~Hw~~al~~~~l~~tG~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (188)
T PF00033_consen   11 LHWLNALLFILLLITGLYLMFPFWWLAGGFPGRQLLRWLHFSLGIVFLALFLLRILWRLFSRRFWKSDDIWFRQIPQYRL   90 (188)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH-TTGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT---GGGHHHHHSHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhHHHHHHHhhc
Confidence            6776666666666667766421    11111 11234789999999999999998766655                   


Q ss_pred             -cCCCCCcceeeeehhHHHHHHHHHHHHHHHHHcccc
Q 047145          287 -PKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNI  322 (383)
Q Consensus       287 -p~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~  322 (383)
                       +.++.+.....+...++.-.+++++..+.+.+|+-+
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iTG~~~  127 (188)
T PF00033_consen   91 FPRKPPPPSGKYNPLQKLVYWALYLLLLLMAITGLIM  127 (188)
T ss_dssp             T-HHHH----SS-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence             111223345578888899999999999999999988

The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.

>COG2717 Predicted membrane protein [Function unknown]

Probab=89.50  E-value=2.4  Score=38.80  Aligned_cols=113  Identities=19%  Similarity=0.252  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhh--hc-ccC---CCccccccchhhHHH
Q 047145          199 LNAVSWGLLMPIGVIIARYLKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIK--LG-SES---VGVVLKTHRTLGIVI  272 (383)
Q Consensus       199 lm~~aw~~l~P~gil~aR~~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~--~~-~~~---~~~~~~~H~~lG~~~  272 (383)
                      ...+.|..++-+....+|+.+.     +.+.++-+.+-+.+++.++.=+..-+.  .. +.+   .+..+.+=-.+|++.
T Consensus        49 ~~al~fLl~~la~tp~~~~~~~-----~~l~~~Rr~LGl~af~~~~lH~~~Y~~~~l~~~~~~~~~d~~~rpyitiG~ia  123 (209)
T COG2717          49 IWALIFLLVTLAVTPLARLLKQ-----PKLIRIRRALGLWAFFYALLHFTAYLVLDLGLDLALLGLDLLKRPYITIGMIA  123 (209)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHhhHHHHHhHHHHHHHHH
Confidence            3444455555455555565442     445566677766666655443222111  11 000   112234555677777


Q ss_pred             HHHHHHHhhhheeccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHc
Q 047145          273 FCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRG  319 (383)
Q Consensus       273 ~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~G  319 (383)
                      +++++.-.+...-.-.++  .-+.|+.+|++ +|.+++||.+=...+
T Consensus       124 flll~pLalTS~k~~~rr--lG~rW~~LHrL-vYl~~~L~~lH~~~s  167 (209)
T COG2717         124 FLLLIPLALTSFKWVRRR--LGKRWKKLHRL-VYLALILGALHYLWS  167 (209)
T ss_pred             HHHHHHHHHHhhHHHHHH--HHHHHHHHHHH-HHHHHHHHHHHHHHh
Confidence            766655544332110111  11559999985 688888888888773

>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi

Probab=89.46  E-value=1.1  Score=36.46  Aligned_cols=88  Identities=20%  Similarity=0.251  Sum_probs=52.2

Q ss_pred             CCCceeeehhhhHHHHHHHH-HHHHhhhhhhcccCCCccccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhH
Q 047145          224 AGPAWFYLHVSCQLSAYIVG-VAGWATGIKLGSESVGVVLKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHH  302 (383)
Q Consensus       224 ~~~~Wf~~H~~~q~~~~~~~-i~g~~l~~~~~~~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~  302 (383)
                      +.+...+.|..+|++++++. -+|++++..-   +     +.|...=++-+++.++-.+.+...-... + ..+.+-.|.
T Consensus        13 ~~~~~l~~Hi~lm~la~~il~Pi~lvL~~~~---s-----r~~~~~q~~~~~l~~~g~~~g~~~~~~~-p-~lyp~n~H~   82 (105)
T PF10348_consen   13 PHRSALYAHIVLMTLAWVILYPIGLVLGNAR---S-----RWHLPVQTVFLVLMILGLFLGSVYNGST-P-DLYPNNAHG   82 (105)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHcc---c-----hHHHHHHHHHHHHHHHHHHHHHHHhcCC-C-CCCCCCHHH
Confidence            45667889999999886544 4555554322   1     2344333333333333332222211111 1 144678999


Q ss_pred             HHHHHHHHHHHHHHHHccc
Q 047145          303 SVGYATIILSIINIYRGFN  321 (383)
Q Consensus       303 ~~G~~~~~lg~~~i~~Gl~  321 (383)
                      -+|++++++.+++.++|+-
T Consensus        83 k~g~il~~l~~~q~~~gv~  101 (105)
T PF10348_consen   83 KMGWILFVLMIVQVILGVI  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999874

Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.

>PF10067 DUF2306: Predicted membrane protein (DUF2306); InterPro: IPR018750 Members of this family of hypothetical bacterial proteins have no known function

Probab=88.90  E-value=1.2  Score=36.13  Aligned_cols=32  Identities=16%  Similarity=0.027  Sum_probs=26.3

Q ss_pred             ceeeeehhHHHHHHHHHHHHHHHHHcccccCC
Q 047145          294 RIYWNFYHHSVGYATIILSIINIYRGFNILKP  325 (383)
Q Consensus       294 r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~~~  325 (383)
                      |+.....|+++||+-+++..+....|+.+...
T Consensus         2 R~k~~~~HR~lGrvyv~~~~~~a~sa~~i~~~   33 (103)
T PF10067_consen    2 RRKGPRLHRWLGRVYVAAMLISALSALFIAFY   33 (103)
T ss_pred             CCCcccHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence            44566799999999999999999999877643

>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []

Probab=84.85  E-value=5  Score=34.07  Aligned_cols=28  Identities=18%  Similarity=0.319  Sum_probs=21.9

Q ss_pred             cceeeeehhHHHHHHHHHHHHHHHHHcc
Q 047145          293 YRIYWNFYHHSVGYATIILSIINIYRGF  320 (383)
Q Consensus       293 ~r~~~~~~H~~~G~~~~~lg~~~i~~Gl  320 (383)
                      .++++.....+.||.++.+=+..+.++.
T Consensus        57 i~~~~~FL~~~~GRGlfyif~G~l~~~~   84 (136)
T PF08507_consen   57 IRKYFGFLYSYIGRGLFYIFLGTLCLGQ   84 (136)
T ss_pred             HHHhHhHHHhHHHHHHHHHHHHHHHHhh
Confidence            6788888999999998877666666555

In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].

>PF13172 PepSY_TM_1: PepSY-associated TM helix

Probab=84.73  E-value=0.68  Score=29.51  Aligned_cols=30  Identities=20%  Similarity=0.395  Sum_probs=24.1

Q ss_pred             ceeeeehhHHHHHHHHHHHHHHHHHccccc
Q 047145          294 RIYWNFYHHSVGYATIILSIINIYRGFNIL  323 (383)
Q Consensus       294 r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~  323 (383)
                      |+.+..+|+++|..+.+.-.+-+.+|+.+.
T Consensus         2 r~~~~~~H~~~g~~~~~~ll~~~lTG~~l~   31 (34)
T PF13172_consen    2 RKFWRKIHRWLGLIAAIFLLLLALTGALLN   31 (34)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            566778899999998888888888887654

>PF00033 Cytochrom_B_N: Cytochrome b(N-terminal)/b6/petB; InterPro: IPR016174 This entry represents a haem-binding domain with a 4-helical bundle structure that is found in transmembrane di-haem cytochromes

Probab=84.35  E-value=2.2  Score=37.53  Aligned_cols=129  Identities=19%  Similarity=0.119  Sum_probs=73.4

Q ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHh---hhhcccCCCceeeehhhhHHHHHHHHHHHHhhhhhh---------------
Q 047145          192 KRNIHGVLNAVSWGLLMPIGVIIARY---LKVFKSAGPAWFYLHVSCQLSAYIVGVAGWATGIKL---------------  253 (383)
Q Consensus       192 ~~~~Hg~lm~~aw~~l~P~gil~aR~---~k~~~~~~~~Wf~~H~~~q~~~~~~~i~g~~l~~~~---------------  253 (383)
                      .+..| +++++.+.+++..|..+...   ...........+.+|..+-++-+++.+.=++..+..               
T Consensus         8 ~R~~H-w~~al~~~~l~~tG~~~~~~~~~~~~~~~~~~~~~~~H~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (188)
T PF00033_consen    8 TRLLH-WLNALLFILLLITGLYLMFPFWWLAGGFPGRQLLRWLHFSLGIVFLALFLLRILWRLFSRRFWKSDDIWFRQIP   86 (188)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHH-TTGGGGGTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHGGGT---GGGHHHHHSHH
T ss_pred             HHHHH-HHHHHHHHHHHHHHHHHHcccccccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcchhhhhhHHHHHH
Confidence            34566 47788899999999988521   111111233456788887766655554444433333               


Q ss_pred             ---c-c----cCCCccccccchhhHHHHHHHHHHhhhheec--------cCCC---CCcceeeeehhHHHHHHHHHHHHH
Q 047145          254 ---G-S----ESVGVVLKTHRTLGIVIFCLGTLQAFALLLR--------PKPD---HKYRIYWNFYHHSVGYATIILSII  314 (383)
Q Consensus       254 ---~-~----~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~r--------p~~~---~~~r~~~~~~H~~~G~~~~~lg~~  314 (383)
                         . .    ...+..+...+..-++++++.+++++.|+..        +...   .........+|.+.+.+++++-.+
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iTG~~~~~~~~~~~~~~~~~~~~~~~~~~~iH~~~~~ll~~~i~~  166 (188)
T PF00033_consen   87 QYRLFPRKPPPPSGKYNPLQKLVYWALYLLLLLMAITGLIMLWFFWWPLPPWLLPPPGLAEWARLIHFILAYLLLAFIII  166 (188)
T ss_dssp             HHHTT-HHHH----SS-HHHHHHHHHHHHHHHHHHHHHHHC-----TTTTGGGS-HHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             HhhccCCCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence               0 0    0011123466677777777788888766543        1111   123456778888888888777766


Q ss_pred             HHHHccc
Q 047145          315 NIYRGFN  321 (383)
Q Consensus       315 ~i~~Gl~  321 (383)
                      =++.++.
T Consensus       167 Hi~~a~~  173 (188)
T PF00033_consen  167 HIYAAIF  173 (188)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            6665544

The domain contains four transmembrane helices in an up-and-down bundle, and binds two haem groups in between the helices; three of the four haem-binding residues is conserved between family members. Proteins containing this domain include: N-terminal domain of mitochondrial cytochrome b subunit, in which the domain contains an extra transmembrane linker helix that is absent in plant and cyanobacteria subunits []. Cytochrome b6 subunit of the cytochrome b6f complex, which provides the electronic connection between the photosystems I and II reaction centres of oxygenic photosynthesis, and generates a transmembrane electrochemical proton gradient for adenosine triphosphate synthesis []. Cytochrome gamma subunit of formate dehydrogenase-N (Fdn-N), which acts as a major component of Escherichia coli nitrate respiration []. ; GO: 0022904 respiratory electron transport chain, 0016020 membrane; PDB: 1KQG_C 1KQF_C.

>COG5658 Predicted integral membrane protein [Function unknown]

Probab=84.11  E-value=3.8  Score=37.32  Aligned_cols=44  Identities=9%  Similarity=-0.019  Sum_probs=32.3

Q ss_pred             CcceeeeehhHHHHHHHHHHHHHHHHHcccccCCCcccchhHHH
Q 047145          292 KYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDNKWKQAYTG  335 (383)
Q Consensus       292 ~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~~~~~~~~~~~~~  335 (383)
                      +-+..|++.|+++|-.+++.+.+....+.......+-+...+..
T Consensus        40 ~d~~~wk~a~~~l~pl~vi~gl~~~~~~~l~~~~~~~~~~v~~~   83 (204)
T COG5658          40 PDQAMWKKAGLFLGPLLVIGGLVTRYMSLLAGGQGQMLLAVALF   83 (204)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHHHHHH
Confidence            34567999999999999999999998887665554434444433

>PF13301 DUF4079: Protein of unknown function (DUF4079)

Probab=83.79  E-value=9.4  Score=34.05  Aligned_cols=68  Identities=18%  Similarity=0.080  Sum_probs=49.5

Q ss_pred             ccccchhhHHHHHHHHHHhhhheeccCCCCCcceeeeehhHHHHHHHHHHHHHHHHHcccccCCCc-ccch
Q 047145          262 LKTHRTLGIVIFCLGTLQAFALLLRPKPDHKYRIYWNFYHHSVGYATIILSIINIYRGFNILKPDN-KWKQ  331 (383)
Q Consensus       262 ~~~H~~lG~~~~~l~~~Q~l~~~~rp~~~~~~r~~~~~~H~~~G~~~~~lg~~~i~~Gl~~~~~~~-~~~~  331 (383)
                      ...|..+|..+++++.+-.+++..--....  .+.+..-|-|.|..+..|=.++..+.-.+...++ .|..
T Consensus        80 r~~H~~~g~~ll~~~~L~~lGG~~~~~~~~--~~lf~spH~~~Gl~~~~L~~~s~al~~~i~~g~~~~~R~  148 (175)
T PF13301_consen   80 RDRHYRLGFALLAFMGLGALGGQLGTYRQN--GKLFWSPHLWAGLAVVGLMAFSAALVPQIQKGNRPWARR  148 (175)
T ss_pred             HHHHHHHHHHHHHHHHHHHHcchHHHHHcC--CCCccCchHHHHHHHHHHHHHHHHHHHHHccCCchhHHH
Confidence            468999999999999998887653111111  1255556999999999999999999888876433 4444

>PF10951 DUF2776: Protein of unknown function (DUF2776); InterPro: IPR021240 This bacterial family of proteins has no known function

Probab=83.37  E-value=3.6  Score=39.30  Aligned_cols=82  Identities=22%  Similarity=0.366  Sum_probs=47.6

Q ss_pred             hHHHHHHHHHHHHhhhhhhcc---cCCCccccccchhhHHHHHHHHHHhhhheec---cCCCCCcceeeeehhHHHHHHH
Q 047145          235 CQLSAYIVGVAGWATGIKLGS---ESVGVVLKTHRTLGIVIFCLGTLQAFALLLR---PKPDHKYRIYWNFYHHSVGYAT  308 (383)
Q Consensus       235 ~q~~~~~~~i~g~~l~~~~~~---~~~~~~~~~H~~lG~~~~~l~~~Q~l~~~~r---p~~~~~~r~~~~~~H~~~G~~~  308 (383)
                      +-.+..+++++|++-++.+-.   +.+++.---|-..|+..++-.++-.++-+.|   ..-..+-|+.|.+       ..
T Consensus       157 Liav~~~~~li~~iw~~~Ll~~~~~~p~y~VAGhVm~Gla~iCtsLIaLVAtI~RQirN~ys~~Er~~W~~-------lV  229 (347)
T PF10951_consen  157 LIAVPILCALIGWIWAIVLLSSSDEHPAYFVAGHVMFGLACICTSLIALVATIARQIRNTYSEKERWKWPK-------LV  229 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCccceehhHHHhhHHHHHHHHHHHHHHHHHHHhccccHHHhhhhHH-------HH
Confidence            344566777777777766542   2233333568888888877666655555543   3333444555554       45


Q ss_pred             HHHHHHHHHHccccc
Q 047145          309 IILSIINIYRGFNIL  323 (383)
Q Consensus       309 ~~lg~~~i~~Gl~~~  323 (383)
                      +++|-+++..|+...
T Consensus       230 l~mGsi~~l~Gl~vl  244 (347)
T PF10951_consen  230 LVMGSISILWGLYVL  244 (347)
T ss_pred             HHHhhHHHHhhhheE
Confidence            566666666666554

>PF15099 PIRT: Phosphoinositide-interacting protein family

Probab=82.59  E-value=0.98  Score=37.65  Aligned_cols=69  Identities=13%  Similarity=0.344  Sum_probs=36.5

Q ss_pred             eeehh--HHHHHHHHHHHHHHHHHcccccCCCcccchhHHHHHHHHHHHHHHHHHHHhhHhhhcccCCCCCC
Q 047145          297 WNFYH--HSVGYATIILSIINIYRGFNILKPDNKWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKSGSGDK  366 (383)
Q Consensus       297 ~~~~H--~~~G~~~~~lg~~~i~~Gl~~~~~~~~~~~~~~~~~~~~~~~~v~lei~~w~~~~~~~~~~~~~~  366 (383)
                      |.++|  .-+|-+++++|++-..+.+.+-...+... .+..++..+.++.++....-|+..+|||+++|++.
T Consensus        46 ~s~Yrci~pfG~vili~GvvvT~vays~n~~~si~~-~~G~vlLs~GLmlL~~~alcW~~~~rkK~~kr~eS  116 (129)
T PF15099_consen   46 WSCYRCIMPFGVVILIAGVVVTAVAYSFNSHGSIIS-IFGPVLLSLGLMLLACSALCWKPIIRKKKKKRRES  116 (129)
T ss_pred             ceEEEEEEEehHHHHHHhhHhheeeEeecCCcchhh-hehHHHHHHHHHHHHhhhheehhhhHhHHHHhhhh
Confidence            44444  56788899999887766666533333222 22323333344334444456776555555444443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	383
1d7b_A	186	Cellobiose dehydrogenase; B-type cytochrome, Met/H	99.61
2l8s_A	54	Integrin alpha-1; transmembrane region, detergent	84.7
2knc_A	54	Integrin alpha-IIB; transmembrane signaling, prote	80.53

>1d7b_A Cellobiose dehydrogenase; B-type cytochrome, Met/His ligation, beta sandwich, Fe(II)- protoporphyrin IX, oxidoreductase; HET: NAG BMA HEM 1PG; 1.90A {Phanerochaete chrysosporium} SCOP: b.1.9.1 PDB: 1d7d_A* 1d7c_A* 1pl3_A*

Probab=99.61  E-value=1.2e-14  Score=129.32  Aligned_cols=135  Identities=13%  Similarity=0.122  Sum_probs=101.1

Q ss_pred             CCceEEEEEEeCCC----CeEEEEEEEecCCCCCeEEEEEcCCCCCCCCCcEEEEEEcCCCcEEEEEeecccccccc-cC
Q 047145           33 VLNAYIHYNYDSSS----GKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPITQYQTTL-AE  107 (383)
Q Consensus        33 ~~~~~l~W~~~~~~----~~i~i~~~~~~~~~~GWVA~Gfs~~g~~M~gad~vI~~~~~~G~v~v~~~~~~g~~~p~-~~  107 (383)
                      ..++.+.|.+..+.    +.-+|+++++.|.+.||+|||+   |.+|.|++|+|+|+++ |++++++|+.+||.+|. ++
T Consensus        22 ~~~~~f~~alP~~~~s~~~s~d~~~qi~~p~~~gW~g~g~---Gg~M~gs~l~v~w~~~-~~v~~S~R~a~g~~~P~~y~   97 (186)
T 1d7b_A           22 VHDVTYGFVFPPLATSGAQSTEFIGEVVAPIASKWIGIAL---GGAMNNDLLLVAWANG-NQIVSSTRWATGYVQPTAYT   97 (186)
T ss_dssp             TTTEEEEEEBCCCCSSSCCCCCEEEEEEEETTCCEEEEET---TSSSSSSCEEEEEEET-TEEEEEEEECSSSSCCEECC
T ss_pred             CCCEEEEEECCCcccCCCCCccEEEEEEccCCCCEEEEec---CCCCCCCcEEEEEeCC-CEEEEEEEEecCccCCCccC
Confidence            55688888875322    2357888888887899999999   4569999999999975 88999999999999997 78


Q ss_pred             CCceeeeccccEEEeCCEEEEEEEe----cc-CCC----CcceeEEEeeCCCC-------CCCCCCCCCCCCCCccceee
Q 047145          108 GNLAFDVSDLTATYANNEMIIFATL----GL-QNG----TTTLHQVWQQGPLS-------GNVPAIHSTTGPNVQSMGTL  171 (383)
Q Consensus       108 ~~~~~~l~~~s~~~~~g~~~~~~~~----~l-~~~----~~~~~~IwA~G~~~-------~~~l~~H~~~~~n~~~~~~l  171 (383)
                      ++.+++++..++ ++++++++.|++    .+ ..+    +....++||+++..       +..+.+|+.     .|.+.+
T Consensus        98 ~~~~~~lL~gs~-vn~t~~~~~f~C~~C~~w~~~g~~~~ts~~~~iwA~~~~~p~~~~~~~a~~~~H~~-----~G~~~~  171 (186)
T 1d7b_A           98 GTATLTTLPETT-INSTHWKWVFRCQGCTEWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHTD-----FGFFGI  171 (186)
T ss_dssp             SSCEEEECTTCE-ECSSEEEEEEEEETTTBCTTSCBCCTTSEEEEEEEEESSCCSCTTCTTCCCCCCSE-----EEEEEE
T ss_pred             CCceEEEccccc-EeCCEEEEEEEeCCCcccCCCCccccCCCCeEEEEECCCCCCCCCCCcccchhhhC-----cceEEE
Confidence            778899988654 467887765443    34 222    12238999997542       346788875     478999


Q ss_pred             eeccCC
Q 047145          172 NLFSGQ  177 (383)
Q Consensus       172 dl~~g~  177 (383)
                      ||.+..
T Consensus       172 dL~~a~  177 (186)
T 1d7b_A          172 DYSTAH  177 (186)
T ss_dssp             EGGGCB
T ss_pred             Eccccc
Confidence            999543

>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}

Probab=84.70  E-value=1.5  Score=30.19  Aligned_cols=35  Identities=11%  Similarity=0.246  Sum_probs=19.4

Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHhhHhhhcccCC
Q 047145          328 KWKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKSG  362 (383)
Q Consensus       328 ~~~~~~~~~~~~~~~~~v~lei~~w~~~~~~~~~~  362 (383)
                      -|.++..++..++++..+++-.+++-+++|+|+.+
T Consensus         9 ~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~~~~~   43 (54)
T 2l8s_A            9 LWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKK   43 (54)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHcCcccCCCcch
Confidence            35555444455555545555556666676666544

>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}

Probab=80.53  E-value=3.5  Score=28.33  Aligned_cols=34  Identities=12%  Similarity=0.117  Sum_probs=17.9

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHhhHhhhcccCC
Q 047145          329 WKQAYTGCIIVLVCVAVVLEIFTWALVIKRKKSG  362 (383)
Q Consensus       329 ~~~~~~~~~~~~~~~~v~lei~~w~~~~~~~~~~  362 (383)
                      |.++..++..++++..+++-.+++-+++|+|+.+
T Consensus        13 wiIi~svl~GLllL~li~~~LwK~GFFkR~~~~~   46 (54)
T 2knc_A           13 WWVLVGVLGGLLLLTILVLAMWKVGFFKRNRPPL   46 (54)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCcccCCCCCc
Confidence            4444444444444444455556666677666533

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	383
d1pl3a_	186	Cytochrome domain of cellobiose dehydrogenase {Fun	99.59

>d1pl3a_ b.1.9.1 (A:) Cytochrome domain of cellobiose dehydrogenase {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: CBD9-like
family: Cytochrome domain of cellobiose dehydrogenase
domain: Cytochrome domain of cellobiose dehydrogenase
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=99.59  E-value=1.1e-14  Score=127.75  Aligned_cols=144  Identities=15%  Similarity=0.150  Sum_probs=101.1

Q ss_pred             ccccccccCCCCceEEEEEEeCC----CCeEEEEEEEecCCCCCeEEEEEcCCCCCCCCCcEEEEEEcCCCcEEEEEeec
Q 047145           23 RVFKSCNDLPVLNAYIHYNYDSS----SGKLEIGYRQTRVSSAQWVSWAVNPTEQGMVGSQALVAYRQPDGKIRAYTSPI   98 (383)
Q Consensus        23 ~~y~~c~~l~~~~~~l~W~~~~~----~~~i~i~~~~~~~~~~GWVA~Gfs~~g~~M~gad~vI~~~~~~G~v~v~~~~~   98 (383)
                      -.|..-.. +..++++.+.+-.+    .++-++++++..|.+.||+||||+   .+|.|++|+|+|++ +|++++++|+.
T Consensus        13 i~f~~~~~-~~~~~~~~~a~P~~~~~~~~~~d~i~qi~ap~~~GWvgiG~g---g~M~gs~l~V~w~~-~~~v~~S~R~a   87 (186)
T d1pl3a_          13 FQFTGITD-PVHDVTYGFVFPPLATSGAQSTEFIGEVVAPIASKWIGIALG---GAHNNDLLLVAWAN-GNQIVSSTRWA   87 (186)
T ss_dssp             CEEEEEEE-TTTTEEEEEEBCCCCSSSCCCCCEEEEEEEETTCCEEEEETT---SSSSSSCEEEEEEE-TTEEEEEEEEC
T ss_pred             eEEEeeec-CCCCEEEEEEeCCcccCCCCCcCEEEEEeCCCCCcEEEEEcC---CCCCCCcEEEEEec-CCeEEEEEEEe
Confidence            44443322 44456655554321    234578888888889999999994   46999999999997 58899999999


Q ss_pred             ccccccc-cCCCceeeeccccEEEeCCEEEEEEEe----ccCCC-----CcceeEEEeeCCCC-------CCCCCCCCCC
Q 047145           99 TQYQTTL-AEGNLAFDVSDLTATYANNEMIIFATL----GLQNG-----TTTLHQVWQQGPLS-------GNVPAIHSTT  161 (383)
Q Consensus        99 ~g~~~p~-~~~~~~~~l~~~s~~~~~g~~~~~~~~----~l~~~-----~~~~~~IwA~G~~~-------~~~l~~H~~~  161 (383)
                      +||.+|. .++..++.++..+. .++++++..|++    .++.+     +....+|||+++..       +..+.+|+. 
T Consensus        88 tG~~~P~~~~~~~~~~~l~~s~-vn~t~~~~~f~C~~C~~w~~~~~~~~~~~~~~iwA~~~~~p~~~~~~~~~i~~H~~-  165 (186)
T d1pl3a_          88 TGYVQPTAYTGTATLTTLPETT-INSTHWKWVFRCQGCTEWNNGGGIDVTSQGVLAWAFSNVAVDDPSDPQSTFSEHTD-  165 (186)
T ss_dssp             STTSCCEECCSSCEEEECTTCE-ECSSEEEEEEEEETCSBCTTSCBCCTTSEEEEEEEEESSCCSCTTCTTCCCCCCSE-
T ss_pred             cceeCCcccCCCceEEEccCce-EECCEEEEEEEEeccccccCCCcccCCCceEEEEEECCCCCCCCCCCccCcceecC-
Confidence            9999886 45555666665444 467877665443    34333     24568999998642       457788963 


Q ss_pred             CCCCccceeeeeccCC
Q 047145          162 GPNVQSMGTLNLFSGQ  177 (383)
Q Consensus       162 ~~n~~~~~~ldl~~g~  177 (383)
                          +|.+.+||.+..
T Consensus       166 ----~G~f~~dl~~a~  177 (186)
T d1pl3a_         166 ----FGFFGIDYSTAH  177 (186)
T ss_dssp             ----EEEEEEEGGGCB
T ss_pred             ----CceEEEEcccCc
Confidence                588999998654