Citrus Sinensis ID: 047437
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 223 | ||||||
| 302144011 | 295 | unnamed protein product [Vitis vinifera] | 0.973 | 0.735 | 0.790 | 3e-94 | |
| 359490846 | 292 | PREDICTED: pathogenesis-related protein | 0.973 | 0.743 | 0.790 | 4e-94 | |
| 255557178 | 320 | Osmotin precursor, putative [Ricinus com | 0.941 | 0.656 | 0.828 | 1e-91 | |
| 224134925 | 236 | predicted protein [Populus trichocarpa] | 0.937 | 0.885 | 0.776 | 3e-88 | |
| 356551823 | 309 | PREDICTED: pathogenesis-related protein | 0.977 | 0.705 | 0.711 | 5e-88 | |
| 356498906 | 313 | PREDICTED: pathogenesis-related protein | 0.986 | 0.702 | 0.696 | 6e-87 | |
| 449478693 | 291 | PREDICTED: pathogenesis-related protein | 0.986 | 0.756 | 0.730 | 6e-87 | |
| 357490399 | 455 | Thaumatin-like protein [Medicago truncat | 0.986 | 0.483 | 0.694 | 1e-86 | |
| 449435360 | 255 | PREDICTED: pathogenesis-related protein | 0.986 | 0.862 | 0.730 | 2e-86 | |
| 297808477 | 403 | hypothetical protein ARALYDRAFT_489325 [ | 0.946 | 0.523 | 0.748 | 4e-86 |
| >gi|302144011|emb|CBI23116.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 350 bits (898), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 174/220 (79%), Positives = 189/220 (85%), Gaps = 3/220 (1%)
Query: 4 ITSWPFLAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQ 63
+ SW F FL+ S+ PS TFTITNNCP+TIWPGTLAGSGTPQL TTG QLESGQ
Sbjct: 1 MLSWSF-TLFLIAISVLSSPSS-CTFTITNNCPHTIWPGTLAGSGTPQLPTTGLQLESGQ 58
Query: 64 SVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKG 123
S+RIP+ PGWSGRIWARTGC+FDE G G+CQTGDCGGRL+CDG GA PP SLFEITLG G
Sbjct: 59 SIRIPTSPGWSGRIWARTGCTFDESGAGTCQTGDCGGRLECDGIGAAPPTSLFEITLGAG 118
Query: 124 NDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVI 183
DKDFYDVS VDGYNLPL+A PRGVYG CNATGCASDIN+GCPKELQVVG G EG V+
Sbjct: 119 TDKDFYDVSFVDGYNLPLIAVPRGVYGGCNATGCASDINIGCPKELQVVGNSG-EEGGVV 177
Query: 184 ACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP 223
AC+SAC+AFGLDQYCCSGEFANP+TCRPSFYSSIFKRACP
Sbjct: 178 ACRSACDAFGLDQYCCSGEFANPSTCRPSFYSSIFKRACP 217
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359490846|ref|XP_002269836.2| PREDICTED: pathogenesis-related protein 5 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255557178|ref|XP_002519620.1| Osmotin precursor, putative [Ricinus communis] gi|223541210|gb|EEF42765.1| Osmotin precursor, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224134925|ref|XP_002321939.1| predicted protein [Populus trichocarpa] gi|222868935|gb|EEF06066.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356551823|ref|XP_003544273.1| PREDICTED: pathogenesis-related protein 5-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356498906|ref|XP_003518288.1| PREDICTED: pathogenesis-related protein 5-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449478693|ref|XP_004155393.1| PREDICTED: pathogenesis-related protein 5-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|357490399|ref|XP_003615487.1| Thaumatin-like protein [Medicago truncatula] gi|355516822|gb|AES98445.1| Thaumatin-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449435360|ref|XP_004135463.1| PREDICTED: pathogenesis-related protein 5-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297808477|ref|XP_002872122.1| hypothetical protein ARALYDRAFT_489325 [Arabidopsis lyrata subsp. lyrata] gi|297317959|gb|EFH48381.1| hypothetical protein ARALYDRAFT_489325 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 223 | ||||||
| TAIR|locus:2153929 | 420 | AT5G24620 [Arabidopsis thalian | 0.892 | 0.473 | 0.727 | 4e-83 | |
| TAIR|locus:2121189 | 345 | AT4G38660 "AT4G38660" [Arabido | 0.852 | 0.550 | 0.54 | 1.9e-58 | |
| UNIPROTKB|O80327 | 244 | TL1 "Thaumatin-like protein 1" | 0.874 | 0.799 | 0.51 | 4.8e-55 | |
| TAIR|locus:2016442 | 247 | AT1G19320 "AT1G19320" [Arabido | 0.860 | 0.777 | 0.529 | 4.8e-55 | |
| TAIR|locus:2827805 | 253 | AT2G17860 "AT2G17860" [Arabido | 0.869 | 0.766 | 0.522 | 7.8e-55 | |
| TAIR|locus:2135882 | 260 | TLP1 "AT4G24180" [Arabidopsis | 0.852 | 0.730 | 0.509 | 2.6e-54 | |
| TAIR|locus:2005549 | 330 | AT1G75800 "AT1G75800" [Arabido | 0.878 | 0.593 | 0.507 | 1.9e-53 | |
| TAIR|locus:2027161 | 246 | TLP-3 "AT1G75030" [Arabidopsis | 0.860 | 0.780 | 0.515 | 3e-53 | |
| TAIR|locus:2135129 | 301 | AT4G36010 "AT4G36010" [Arabido | 0.865 | 0.641 | 0.512 | 6.3e-53 | |
| TAIR|locus:2198641 | 316 | AT1G20030 "AT1G20030" [Arabido | 0.874 | 0.617 | 0.505 | 3.5e-52 |
| TAIR|locus:2153929 AT5G24620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 817 (292.7 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
Identities = 147/202 (72%), Positives = 164/202 (81%)
Query: 25 HGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCS 84
+ STF ITNNCP+TIWPGTLAGSGT L TTGF+L+ GQSVRIP+ GWSGRIWARTGC+
Sbjct: 23 YSSTFVITNNCPFTIWPGTLAGSGTQPLPTTGFRLDVGQSVRIPTALGWSGRIWARTGCN 82
Query: 85 FDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGND-KDFYDVSIVDGYNLPLVA 143
FD G G C TGDCGG+L+C G+GA PP SLFEITLG G+D KDFYDVS+VDGYNLP+VA
Sbjct: 83 FDANGAGKCMTGDCGGKLECAGNGAAPPTSLFEITLGHGSDDKDFYDVSLVDGYNLPIVA 142
Query: 144 EPRG--VYGACNATGCASDINMGCPKELQXXXXXXXXXXXXIACKSACEAFGLDQYCCSG 201
P G + GACNATGC +DIN+ CPKELQ +ACKSACEAFGLDQYCCSG
Sbjct: 143 LPTGGGLVGACNATGCVADINISCPKELQVMGEEEAERGGVVACKSACEAFGLDQYCCSG 202
Query: 202 EFANPTTCRPSFYSSIFKRACP 223
+FANPTTCRPS YSSIFKRACP
Sbjct: 203 QFANPTTCRPSLYSSIFKRACP 224
|
|
| TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2827805 AT2G17860 "AT2G17860" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2135129 AT4G36010 "AT4G36010" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| GSVIVG00037139001 | SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (248 aa) | |||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 223 | |||
| cd09218 | 219 | cd09218, TLP-PA, allergenic/antifungal thaumatin-l | 1e-105 | |
| pfam00314 | 212 | pfam00314, Thaumatin, Thaumatin family | 4e-91 | |
| smart00205 | 218 | smart00205, THN, Thaumatin family | 1e-79 | |
| cd09215 | 157 | cd09215, Thaumatin-like, the sweet-tasting protein | 1e-41 | |
| cd08961 | 153 | cd08961, GH64-TLP-SF, glycoside hydrolase family 6 | 2e-37 | |
| cd09217 | 151 | cd09217, TLP-P, thaumatin and allergenic/antifunga | 8e-37 | |
| cd09219 | 229 | cd09219, TLP-F, thaumatin-like proteins: basidiomy | 2e-35 |
| >gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Score = 301 bits (772), Expect = e-105
Identities = 111/196 (56%), Positives = 132/196 (67%), Gaps = 4/196 (2%)
Query: 28 TFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDE 87
TFTI N CP+T+WPG L +G PQL GF+L GQS I + GWSGR W RTGCSFD
Sbjct: 1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS 60
Query: 88 FGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRG 147
G GSC TGDCGG L+C+G+G PPA+L E TLG +DFYDVS+VDGYNLP+ P+G
Sbjct: 61 SGKGSCATGDCGGGLECNGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQG 120
Query: 148 VYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPT 207
G C GC +D+N CP ELQV G V+ACKSAC AF D+YCC G + P
Sbjct: 121 GSGGCRTAGCVADLNAVCPAELQVKNSGGR----VVACKSACLAFNTDEYCCRGAYGTPE 176
Query: 208 TCRPSFYSSIFKRACP 223
TC+P+ YS +FK ACP
Sbjct: 177 TCKPTTYSRLFKNACP 192
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219 |
| >gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family | Back alignment and domain information |
|---|
| >gnl|CDD|128501 smart00205, THN, Thaumatin family | Back alignment and domain information |
|---|
| >gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
|---|
| >gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 223 | |||
| cd09218 | 219 | TLP-PA allergenic/antifungal thaumatin-like protei | 100.0 | |
| smart00205 | 218 | THN Thaumatin family. The thaumatin family gathers | 100.0 | |
| cd09219 | 229 | TLP-F thaumatin-like proteins: basidiomycete homol | 100.0 | |
| PF00314 | 213 | Thaumatin: Thaumatin family; InterPro: IPR001938 T | 100.0 | |
| cd09215 | 157 | Thaumatin-like the sweet-tasting protein, thaumati | 100.0 | |
| cd09217 | 151 | TLP-P thaumatin and allergenic/antifungal thaumati | 100.0 | |
| cd08961 | 153 | GH64-TLP-SF glycoside hydrolase family 64 (beta-1, | 100.0 | |
| PF04681 | 155 | Bys1: Blastomyces yeast-phase-specific protein; In | 97.92 | |
| cd09216 | 353 | GH64-LPHase-like glycoside hydrolase family 64: la | 95.06 | |
| cd09220 | 369 | GH64-GluB-like glycoside hydrolase family 64: beta | 90.14 |
| >cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-78 Score=520.36 Aligned_cols=192 Identities=58% Similarity=1.193 Sum_probs=184.3
Q ss_pred EEEEEeCCCCcccceeecCCCCcccCCCCeeeCCCCeEEEeCCCCCceeEeeeccCCCCCCCCcccccCCCCCccccCCC
Q 047437 28 TFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGS 107 (223)
Q Consensus 28 t~ti~N~C~~tVWp~~~~~~g~~~l~~~g~~L~~G~s~s~~~p~~WsGriWaRtgCs~d~~g~~~C~TGdCgg~l~C~g~ 107 (223)
+|||+|||+||||||+++++|++++..+||+|+||++++|++|++|+|||||||+|+||+.|+++|+||||+|+++|++.
T Consensus 1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~ 80 (219)
T cd09218 1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGA 80 (219)
T ss_pred CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCC
Confidence 59999999999999999999999998899999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCceeEEEEecCCCCCceeeeecccccCcceeeeecCCCCCCCCCCccCcccCCCCccccccCCCCCCCCceeecCc
Q 047437 108 GATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKS 187 (223)
Q Consensus 108 g~~ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~~C~~~~C~~dl~~~CP~~l~v~~~~~~~~g~vv~C~S 187 (223)
+++||+|||||+|+..+++|||||||||||||||+|+|+++.+.|+.++|.+|||+.||.||||+++ +|+||||||
T Consensus 81 ~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~----~g~vv~C~S 156 (219)
T cd09218 81 GGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNS----GGRVVACKS 156 (219)
T ss_pred CCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccC----CCcEeeecC
Confidence 8899999999999876789999999999999999999987666899999999999999999999864 488999999
Q ss_pred hhhhhCCCCcccCCCCCCCCCCCCChhHHHHHhhCC
Q 047437 188 ACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP 223 (223)
Q Consensus 188 aC~~~~~~~~CC~G~~~~p~~C~pt~ys~~FK~~CP 223 (223)
||++|++|||||||+|++|++|+|++||++||++||
T Consensus 157 aC~~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP 192 (219)
T cd09218 157 ACLAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACP 192 (219)
T ss_pred HHHhhCCccceecCCCCCCCcCCCcchhHHHHhhCc
Confidence 999999999999999999999999999999999998
|
This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele |
| >smart00205 THN Thaumatin family | Back alignment and domain information |
|---|
| >cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs | Back alignment and domain information |
|---|
| >PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein | Back alignment and domain information |
|---|
| >cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense | Back alignment and domain information |
|---|
| >cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs | Back alignment and domain information |
|---|
| >cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins | Back alignment and domain information |
|---|
| >PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C | Back alignment and domain information |
|---|
| >cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like | Back alignment and domain information |
|---|
| >cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 223 | ||||
| 3zs3_A | 222 | High Resolution Structure Of Mal D 2, The Thaumatin | 1e-47 | ||
| 2ahn_A | 222 | High Resolution Structure Of A Cherry Allergen Pru | 1e-46 | ||
| 1du5_A | 206 | The Crystal Structure Of Zeamatin. Length = 206 | 1e-35 | ||
| 1z3q_A | 200 | Resolution Of The Structure Of The Allergenic And A | 2e-33 | ||
| 1pcv_A | 205 | Crystal Structure Of Osmotin, A Plant Antifungal Pr | 1e-30 | ||
| 4h8t_A | 198 | Structure Of Haze Forming Proteins In White Wines: | 4e-30 | ||
| 2i0w_A | 207 | Crystal Structure Analysis Of Np24-I, A Thaumatin-L | 9e-30 | ||
| 1aun_A | 208 | Pathogenesis-Related Protein 5d From Nicotiana Taba | 4e-28 | ||
| 3aok_A | 207 | Crystal Structure Of Sweet-Tasting Protein Thaumati | 4e-28 | ||
| 1kwn_A | 207 | 1.2 A Structure Of Thaumatin Crystallized In Gel Le | 9e-28 | ||
| 2blr_A | 206 | Thaumatin Before A High Dose X-Ray "burn" Length = | 1e-27 | ||
| 1thv_A | 207 | The Structures Of Three Crystal Forms Of The Sweet | 1e-27 | ||
| 1rqw_A | 207 | Thaumatin Structure At 1.05 A Resolution Length = 2 | 1e-27 | ||
| 2d8o_A | 207 | Structure Of Vil-Thaumatin Length = 207 | 3e-27 | ||
| 2d8p_A | 207 | Structure Of Hyper-Vil-Thaumatin Length = 207 | 9e-26 | ||
| 3g7m_A | 151 | Structure Of The Thaumatin-Like Xylanase Inhibitor | 9e-13 |
| >pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 | Back alignment and structure |
|
| >pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 | Back alignment and structure |
| >pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 | Back alignment and structure |
| >pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 | Back alignment and structure |
| >pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 | Back alignment and structure |
| >pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 | Back alignment and structure |
| >pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 | Back alignment and structure |
| >pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 | Back alignment and structure |
| >pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 | Back alignment and structure |
| >pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 | Back alignment and structure |
| >pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 | Back alignment and structure |
| >pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 | Back alignment and structure |
| >pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 | Back alignment and structure |
| >pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 | Back alignment and structure |
| >pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 223 | |||
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 6e-64 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 2e-55 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 3e-49 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 9e-47 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 3e-45 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 5e-39 |
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 | Back alignment and structure |
|---|
Score = 197 bits (500), Expect = 6e-64
Identities = 96/198 (48%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 27 STFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFD 86
+T + NNCPY +WPGTL PQL TTGF+L S S ++ + W+GR WARTGCS D
Sbjct: 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD 60
Query: 87 EFGVGSCQTGDCG-GRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEP 145
G C T DC G++ C+G+GA PPA+L E + G +DFYDVS+VDG+NLP+ P
Sbjct: 61 ASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTP 120
Query: 146 RGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFAN 205
+G G C C +++N CP ELQ G +G V+AC SAC FG QYCC+
Sbjct: 121 QGGTGDCKTASCPANVNAVCPSELQKKG----SDGSVVACLSACVKFGTPQYCCTPPQNT 176
Query: 206 PTTCRPSFYSSIFKRACP 223
P TC P+ YS IF ACP
Sbjct: 177 PETCPPTNYSEIFHNACP 194
|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 | Back alignment and structure |
|---|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 223 | |||
| 2ahn_A | 222 | Thaumatin-like protein; allergen; 1.30A {Prunus av | 100.0 | |
| 1du5_A | 206 | Zeamatin; beta sandwich, antifungal protein; 2.50A | 100.0 | |
| 2vhk_A | 206 | Thaumatin-I; kinetics of crystallization, chiralit | 100.0 | |
| 1aun_A | 208 | PR-5D; antifungal protein, pathogenesis-related pr | 100.0 | |
| 1z3q_A | 200 | Thaumatin-like protein; beta sandwich, antifungal | 100.0 | |
| 3g7m_A | 151 | Xylanase inhibitor TL-XI; beta-sheets, xylan degra | 100.0 | |
| 3gd0_A | 367 | Laminaripentaose-producing beta-1,3-guluase (lphas | 93.14 | |
| 4aor_D | 37 | Trypsin inhibitor 3; hydrolase-inhibitor complex, | 81.0 |
| >2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-79 Score=527.80 Aligned_cols=193 Identities=50% Similarity=1.034 Sum_probs=185.8
Q ss_pred eEEEEEeCCCCcccceeecCCCCcccCCCCeeeCCCCeEEEeCCCCCceeEeeeccCCCCCCCCcccccCCCC-CccccC
Q 047437 27 STFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCG-GRLQCD 105 (223)
Q Consensus 27 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~~g~~L~~G~s~s~~~p~~WsGriWaRtgCs~d~~g~~~C~TGdCg-g~l~C~ 105 (223)
++|||+|+|+|||||++++++|++++.++||+|+||++++|.+|++|+|||||||+|+||++|+++|+||||+ |.|+|+
T Consensus 1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~ 80 (222)
T 2ahn_A 1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN 80 (222)
T ss_dssp CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence 5899999999999999999999999989999999999999999999999999999999999999999999999 999999
Q ss_pred CCCCCCCceeEEEEecCCCCCceeeeecccccCcceeeeecCCCCCCCCCCccCcccCCCCccccccCCCCCCCCceeec
Q 047437 106 GSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIAC 185 (223)
Q Consensus 106 g~g~~ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~~C~~~~C~~dl~~~CP~~l~v~~~~~~~~g~vv~C 185 (223)
+.+++||+|||||+|++.+++|||||||||||||||+|+|+++.+.|+.++|.+|||..||+||||++. +|+||||
T Consensus 81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~----~G~~v~C 156 (222)
T 2ahn_A 81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGS----DGSVVAC 156 (222)
T ss_dssp TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECT----TSCEEEE
T ss_pred CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecC----CCcEecc
Confidence 988899999999999987789999999999999999999998777899999999999999999999764 5899999
Q ss_pred CchhhhhCCCCcccCCCCCCCCCCCCChhHHHHHhhCC
Q 047437 186 KSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP 223 (223)
Q Consensus 186 ~SaC~~~~~~~~CC~G~~~~p~~C~pt~ys~~FK~~CP 223 (223)
||||++|++|||||||+|++|++|+|++||++||++||
T Consensus 157 ~saC~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP 194 (222)
T 2ahn_A 157 LSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACP 194 (222)
T ss_dssp CCHHHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCT
T ss_pred cccccccCCCccccCCCCCCCCCCCcchHHHHHhhcCc
Confidence 99999999999999999999999999999999999998
|
| >1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 | Back alignment and structure |
|---|
| >2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... | Back alignment and structure |
|---|
| >1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A | Back alignment and structure |
|---|
| >1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} | Back alignment and structure |
|---|
| >3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} | Back alignment and structure |
|---|
| >3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* | Back alignment and structure |
|---|
| >4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 223 | ||||
| d1du5a_ | 206 | b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 | 2e-62 | |
| d1rqwa_ | 207 | b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d | 2e-61 | |
| d1auna_ | 208 | b.25.1.1 (A:) Pathogenesis-related protein 5d {Com | 4e-61 |
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Zeamatin species: Maize (Zea mays) [TaxId: 4577]
Score = 191 bits (487), Expect = 2e-62
Identities = 83/197 (42%), Positives = 107/197 (54%), Gaps = 21/197 (10%)
Query: 28 TFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPG-WSGRIWARTGCSFD 86
FT+ N CP+T+W ++ G G QL G+S RI + G + RIWARTGC FD
Sbjct: 2 VFTVVNQCPFTVWAASVPVGG-------GRQLNRGESWRITAPAGTTAARIWARTGCKFD 54
Query: 87 EFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPR 146
G GSC+TGDCGG LQC G G P +L E L + N+ DF+D+S++DG+N+P+ P
Sbjct: 55 ASGRGSCRTGDCGGVLQCTGYGR-APNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPD 113
Query: 147 GVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANP 206
G G CA D+N CP EL+ G C +AC F D+YCC G
Sbjct: 114 GGSGCSRGPRCAVDVNARCPAELRQDGV----------CNNACPVFKKDEYCCVGSA--A 161
Query: 207 TTCRPSFYSSIFKRACP 223
C P+ YS FK CP
Sbjct: 162 NDCHPTNYSRYFKGQCP 178
|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 | Back information, alignment and structure |
|---|
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 223 | |||
| d1du5a_ | 206 | Zeamatin {Maize (Zea mays) [TaxId: 4577]} | 100.0 | |
| d1auna_ | 208 | Pathogenesis-related protein 5d {Common tobacco (N | 100.0 | |
| d1rqwa_ | 207 | Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax | 100.0 |
| >d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Osmotin, thaumatin-like protein superfamily: Osmotin, thaumatin-like protein family: Osmotin, thaumatin-like protein domain: Zeamatin species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00 E-value=8.4e-69 Score=457.61 Aligned_cols=177 Identities=46% Similarity=0.962 Sum_probs=166.4
Q ss_pred eEEEEEeCCCCcccceeecCCCCcccCCCCeeeCCCCeEEEeCCCC-CceeEeeeccCCCCCCCCcccccCCCCCccccC
Q 047437 27 STFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPG-WSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCD 105 (223)
Q Consensus 27 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~~g~~L~~G~s~s~~~p~~-WsGriWaRtgCs~d~~g~~~C~TGdCgg~l~C~ 105 (223)
++|||+|||+|||||++++. ++||+|+||+++++.+|++ |+|||||||||+||++|+++|+||||++.++|+
T Consensus 1 A~fti~N~C~~tvWp~~~p~-------~gg~~L~~G~s~~~~vp~~~w~GRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~ 73 (206)
T d1du5a_ 1 AVFTVVNQCPFTVWAASVPV-------GGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCT 73 (206)
T ss_dssp CEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCTTBSSCC
T ss_pred CEEEEEeCCCCCcccccccC-------CCCeecCCCCeEEEecCCCCcccceecccCCccCCCCCcccccCCCCCeEeCC
Confidence 48999999999999999864 3699999999999999986 899999999999999999999999999999999
Q ss_pred CCCCCCCceeEEEEecCCCCCceeeeecccccCcceeeeecCCCCCCCCCCccCcccCCCCccccccCCCCCCCCceeec
Q 047437 106 GSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIAC 185 (223)
Q Consensus 106 g~g~~ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~~C~~~~C~~dl~~~CP~~l~v~~~~~~~~g~vv~C 185 (223)
+. +.||+|||||+|++.+++|||||||||||||||+|+|+++++.|+.++|.+|||..||.||+++. +|
T Consensus 74 ~~-g~pP~tlaEftl~~~~~~d~YdvSlVDG~NlP~~i~P~~~~~~c~~~~C~~dln~~CP~~l~~~~----------~C 142 (206)
T d1du5a_ 74 GY-GRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDG----------VC 142 (206)
T ss_dssp SC-CCSSCCEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSSSCCCCCEECSCTTTTCCGGGEETT----------EE
T ss_pred CC-CCCCceeEEEEecCCCCcceeecceecccccceEeecCCCCCCcCCCcccccccccCcHhhccCC----------CC
Confidence 85 57999999999997778999999999999999999999988889999999999999999999864 79
Q ss_pred CchhhhhCCCCcccCCCCCCCCCCCCChhHHHHHhhCC
Q 047437 186 KSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP 223 (223)
Q Consensus 186 ~SaC~~~~~~~~CC~G~~~~p~~C~pt~ys~~FK~~CP 223 (223)
||||.+|++|||||||++ +++|+|++||++||++||
T Consensus 143 ~saC~~~~~~~~CC~g~~--~~~c~pt~ys~~FK~~CP 178 (206)
T d1du5a_ 143 NNACPVFKKDEYCCVGSA--ANDCHPTNYSRYFKGQCP 178 (206)
T ss_dssp CCHHHHHCCHHHHCCGGG--GGGCCCCHHHHHHHHHCT
T ss_pred CCcccccCCCcccccCCC--CCCCCcchHHHHHHhhCC
Confidence 999999999999999976 679999999999999998
|
| >d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
| >d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} | Back information, alignment and structure |
|---|