Citrus Sinensis ID: 047437


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220---
MLTITSWPFLAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP
cccccHHHHHHHHHHHHHHHHccccEEEEEEEEcccccEEcEEEcccccccccccccccccccEEEEEccccccccEEcccccccccccccccccccccccEEEcccccccccEEEEEEEcccccccEEEEEcccccccccEEccccccccccccccccccccccccccEEEccccccccEEEEcccHHHHcccccccccccccccccccccHHHHHHHHHcc
cccccHHHHHHHHHHHHHHHHHccccEEEEEEccccccEcccEcccccccccccccEEcccccEEEEEccccccEEEEEEccEEEccccEEEEcccccccEccccccccccccEEEEEEEcccccccEEEEEEEccccccEEEEEccccccccccccHHHHHHHccHHcEEEcccccccccEEEEccHHHHHccccccccccccccccccccHHHHHHHHHcc
MLTITSWPFLAAFLLFGslfflpshgstftitnncpytiwpgtlagsgtpqllttgfqlesgqsvripsvpgwsgriwartgcsfdefgvgscqtgdcggrlqcdgsgatppasLFEItlgkgndkdfydvsivdgynlplvaeprgvygacnatgcasdinmgcpkelqvvggegtreGEVIACKSACeafgldqyccsgefanpttcrpsfyssifkracp
MLTITSWPFLAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGfqlesgqsvripsvpgwsGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPttcrpsfyssifkracp
MLTITSWpflaafllfgslfflpsHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQvvggegtregevIACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP
**TITSWPFLAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIF*****
*****SW**LAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP
MLTITSWPFLAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP
**TITSWPFLAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP
iiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLTITSWPFLAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query223 2.2.26 [Sep-21-2011]
Q9FSG7246 Thaumatin-like protein 1a N/A no 0.923 0.837 0.478 2e-52
P83332246 Thaumatin-like protein 1 N/A no 0.968 0.878 0.475 1e-51
Q9SMH2243 Thaumatin-like protein 1 N/A no 0.937 0.860 0.495 3e-51
P28493239 Pathogenesis-related prot no no 0.950 0.887 0.506 8e-51
O80327244 Thaumatin-like protein 1 N/A no 0.901 0.823 0.519 2e-50
P50694245 Glucan endo-1,3-beta-gluc N/A no 0.901 0.820 0.480 7e-50
P50699243 Thaumatin-like protein OS no no 0.874 0.802 0.5 4e-49
P83335242 Thaumatin-like protein 2 N/A no 0.865 0.797 0.467 5e-47
P83336212 Thaumatin-like protein 1b N/A no 0.816 0.858 0.486 1e-46
Q53MB8253 Thaumatin-like protein OS no no 0.856 0.754 0.448 6e-45
>sp|Q9FSG7|TP1A_MALDO Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1 Back     alignment and function desciption
 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/211 (47%), Positives = 133/211 (63%), Gaps = 5/211 (2%)

Query: 14  LLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGW 73
           L    LFF  +H +  T TNNCP T+WPGTL G   PQL  TGF+L S  S  + +   W
Sbjct: 12  LTLAILFFSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPW 71

Query: 74  SGRIWARTGCSFDEFGVGSCQTGDCG-GRLQCDGSGATPPASLFEITLGKGNDKDFYDVS 132
           SGR W RT CS D  G  +C+T DCG G++ C+G+GA PPA+L EIT+     +D+YDVS
Sbjct: 72  SGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVS 131

Query: 133 IVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAF 192
           +VDG+NLP+   P+G  G C  + C +++N  CP  LQV   +G+    VI+CKSAC AF
Sbjct: 132 LVDGFNLPMSVAPQGGTGECKPSSCPANVNKVCPAPLQVKAADGS----VISCKSACLAF 187

Query: 193 GLDQYCCSGEFANPTTCRPSFYSSIFKRACP 223
           G  +YCC+     P TC P+ YS IF++ CP
Sbjct: 188 GDSKYCCTPPNNTPETCPPTEYSEIFEKQCP 218





Malus domestica (taxid: 3750)
>sp|P83332|TLP1_PRUPE Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|Q9SMH2|TLP1_CASSA Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1 Back     alignment and function description
>sp|P28493|PR5_ARATH Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1 Back     alignment and function description
>sp|O80327|TLP1_PYRPY Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1 Back     alignment and function description
>sp|P50694|TLP_PRUAV Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1 Back     alignment and function description
>sp|P50699|TLPH_ARATH Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2 Back     alignment and function description
>sp|P83335|TLP2_PRUPE Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1 Back     alignment and function description
>sp|P83336|TP1B_MALDO Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1 Back     alignment and function description
>sp|Q53MB8|TLPH_ORYSJ Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query223
302144011295 unnamed protein product [Vitis vinifera] 0.973 0.735 0.790 3e-94
359490846292 PREDICTED: pathogenesis-related protein 0.973 0.743 0.790 4e-94
255557178320 Osmotin precursor, putative [Ricinus com 0.941 0.656 0.828 1e-91
224134925236 predicted protein [Populus trichocarpa] 0.937 0.885 0.776 3e-88
356551823309 PREDICTED: pathogenesis-related protein 0.977 0.705 0.711 5e-88
356498906313 PREDICTED: pathogenesis-related protein 0.986 0.702 0.696 6e-87
449478693291 PREDICTED: pathogenesis-related protein 0.986 0.756 0.730 6e-87
357490399 455 Thaumatin-like protein [Medicago truncat 0.986 0.483 0.694 1e-86
449435360255 PREDICTED: pathogenesis-related protein 0.986 0.862 0.730 2e-86
297808477 403 hypothetical protein ARALYDRAFT_489325 [ 0.946 0.523 0.748 4e-86
>gi|302144011|emb|CBI23116.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 174/220 (79%), Positives = 189/220 (85%), Gaps = 3/220 (1%)

Query: 4   ITSWPFLAAFLLFGSLFFLPSHGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQ 63
           + SW F   FL+  S+   PS   TFTITNNCP+TIWPGTLAGSGTPQL TTG QLESGQ
Sbjct: 1   MLSWSF-TLFLIAISVLSSPSS-CTFTITNNCPHTIWPGTLAGSGTPQLPTTGLQLESGQ 58

Query: 64  SVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKG 123
           S+RIP+ PGWSGRIWARTGC+FDE G G+CQTGDCGGRL+CDG GA PP SLFEITLG G
Sbjct: 59  SIRIPTSPGWSGRIWARTGCTFDESGAGTCQTGDCGGRLECDGIGAAPPTSLFEITLGAG 118

Query: 124 NDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVI 183
            DKDFYDVS VDGYNLPL+A PRGVYG CNATGCASDIN+GCPKELQVVG  G  EG V+
Sbjct: 119 TDKDFYDVSFVDGYNLPLIAVPRGVYGGCNATGCASDINIGCPKELQVVGNSG-EEGGVV 177

Query: 184 ACKSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP 223
           AC+SAC+AFGLDQYCCSGEFANP+TCRPSFYSSIFKRACP
Sbjct: 178 ACRSACDAFGLDQYCCSGEFANPSTCRPSFYSSIFKRACP 217




Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359490846|ref|XP_002269836.2| PREDICTED: pathogenesis-related protein 5 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255557178|ref|XP_002519620.1| Osmotin precursor, putative [Ricinus communis] gi|223541210|gb|EEF42765.1| Osmotin precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224134925|ref|XP_002321939.1| predicted protein [Populus trichocarpa] gi|222868935|gb|EEF06066.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356551823|ref|XP_003544273.1| PREDICTED: pathogenesis-related protein 5-like [Glycine max] Back     alignment and taxonomy information
>gi|356498906|ref|XP_003518288.1| PREDICTED: pathogenesis-related protein 5-like [Glycine max] Back     alignment and taxonomy information
>gi|449478693|ref|XP_004155393.1| PREDICTED: pathogenesis-related protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357490399|ref|XP_003615487.1| Thaumatin-like protein [Medicago truncatula] gi|355516822|gb|AES98445.1| Thaumatin-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|449435360|ref|XP_004135463.1| PREDICTED: pathogenesis-related protein 5-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297808477|ref|XP_002872122.1| hypothetical protein ARALYDRAFT_489325 [Arabidopsis lyrata subsp. lyrata] gi|297317959|gb|EFH48381.1| hypothetical protein ARALYDRAFT_489325 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query223
TAIR|locus:2153929 420 AT5G24620 [Arabidopsis thalian 0.892 0.473 0.727 4e-83
TAIR|locus:2121189 345 AT4G38660 "AT4G38660" [Arabido 0.852 0.550 0.54 1.9e-58
UNIPROTKB|O80327244 TL1 "Thaumatin-like protein 1" 0.874 0.799 0.51 4.8e-55
TAIR|locus:2016442247 AT1G19320 "AT1G19320" [Arabido 0.860 0.777 0.529 4.8e-55
TAIR|locus:2827805253 AT2G17860 "AT2G17860" [Arabido 0.869 0.766 0.522 7.8e-55
TAIR|locus:2135882260 TLP1 "AT4G24180" [Arabidopsis 0.852 0.730 0.509 2.6e-54
TAIR|locus:2005549 330 AT1G75800 "AT1G75800" [Arabido 0.878 0.593 0.507 1.9e-53
TAIR|locus:2027161246 TLP-3 "AT1G75030" [Arabidopsis 0.860 0.780 0.515 3e-53
TAIR|locus:2135129301 AT4G36010 "AT4G36010" [Arabido 0.865 0.641 0.512 6.3e-53
TAIR|locus:2198641316 AT1G20030 "AT1G20030" [Arabido 0.874 0.617 0.505 3.5e-52
TAIR|locus:2153929 AT5G24620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 817 (292.7 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
 Identities = 147/202 (72%), Positives = 164/202 (81%)

Query:    25 HGSTFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCS 84
             + STF ITNNCP+TIWPGTLAGSGT  L TTGF+L+ GQSVRIP+  GWSGRIWARTGC+
Sbjct:    23 YSSTFVITNNCPFTIWPGTLAGSGTQPLPTTGFRLDVGQSVRIPTALGWSGRIWARTGCN 82

Query:    85 FDEFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGND-KDFYDVSIVDGYNLPLVA 143
             FD  G G C TGDCGG+L+C G+GA PP SLFEITLG G+D KDFYDVS+VDGYNLP+VA
Sbjct:    83 FDANGAGKCMTGDCGGKLECAGNGAAPPTSLFEITLGHGSDDKDFYDVSLVDGYNLPIVA 142

Query:   144 EPRG--VYGACNATGCASDINMGCPKELQXXXXXXXXXXXXIACKSACEAFGLDQYCCSG 201
              P G  + GACNATGC +DIN+ CPKELQ            +ACKSACEAFGLDQYCCSG
Sbjct:   143 LPTGGGLVGACNATGCVADINISCPKELQVMGEEEAERGGVVACKSACEAFGLDQYCCSG 202

Query:   202 EFANPTTCRPSFYSSIFKRACP 223
             +FANPTTCRPS YSSIFKRACP
Sbjct:   203 QFANPTTCRPSLYSSIFKRACP 224


GO:0005576 "extracellular region" evidence=ISM
GO:0051707 "response to other organism" evidence=ISS
TAIR|locus:2121189 AT4G38660 "AT4G38660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|O80327 TL1 "Thaumatin-like protein 1" [Pyrus pyrifolia (taxid:3767)] Back     alignment and assigned GO terms
TAIR|locus:2016442 AT1G19320 "AT1G19320" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2827805 AT2G17860 "AT2G17860" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135882 TLP1 "AT4G24180" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005549 AT1G75800 "AT1G75800" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2027161 TLP-3 "AT1G75030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135129 AT4G36010 "AT4G36010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2198641 AT1G20030 "AT1G20030" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O80327TLP1_PYRPYNo assigned EC number0.51900.90130.8237N/Ano

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
GSVIVG00037139001
SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (248 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
cd09218219 cd09218, TLP-PA, allergenic/antifungal thaumatin-l 1e-105
pfam00314212 pfam00314, Thaumatin, Thaumatin family 4e-91
smart00205218 smart00205, THN, Thaumatin family 1e-79
cd09215157 cd09215, Thaumatin-like, the sweet-tasting protein 1e-41
cd08961153 cd08961, GH64-TLP-SF, glycoside hydrolase family 6 2e-37
cd09217151 cd09217, TLP-P, thaumatin and allergenic/antifunga 8e-37
cd09219229 cd09219, TLP-F, thaumatin-like proteins: basidiomy 2e-35
>gnl|CDD|185757 cd09218, TLP-PA, allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
 Score =  301 bits (772), Expect = e-105
 Identities = 111/196 (56%), Positives = 132/196 (67%), Gaps = 4/196 (2%)

Query: 28  TFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDE 87
           TFTI N CP+T+WPG L  +G PQL   GF+L  GQS  I +  GWSGR W RTGCSFD 
Sbjct: 1   TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDS 60

Query: 88  FGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRG 147
            G GSC TGDCGG L+C+G+G  PPA+L E TLG    +DFYDVS+VDGYNLP+   P+G
Sbjct: 61  SGKGSCATGDCGGGLECNGAGGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQG 120

Query: 148 VYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANPT 207
             G C   GC +D+N  CP ELQV    G     V+ACKSAC AF  D+YCC G +  P 
Sbjct: 121 GSGGCRTAGCVADLNAVCPAELQVKNSGGR----VVACKSACLAFNTDEYCCRGAYGTPE 176

Query: 208 TCRPSFYSSIFKRACP 223
           TC+P+ YS +FK ACP
Sbjct: 177 TCKPTTYSRLFKNACP 192


This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, electropositive, or neutral cleft occurring between domains I and II. It has been proposed that the antifungal activity of plant PR5 proteins relies on the strong electronegative character of this cleft. Some TLPs hydrolyze the beta-1,3-glucans of the type commonly found in fungal walls. TLPs within this subfamily contain 16 conserved Cys residues. Length = 219

>gnl|CDD|215853 pfam00314, Thaumatin, Thaumatin family Back     alignment and domain information
>gnl|CDD|128501 smart00205, THN, Thaumatin family Back     alignment and domain information
>gnl|CDD|185754 cd09215, Thaumatin-like, the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>gnl|CDD|185752 cd08961, GH64-TLP-SF, glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>gnl|CDD|185756 cd09217, TLP-P, thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>gnl|CDD|185758 cd09219, TLP-F, thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 223
cd09218219 TLP-PA allergenic/antifungal thaumatin-like protei 100.0
smart00205218 THN Thaumatin family. The thaumatin family gathers 100.0
cd09219229 TLP-F thaumatin-like proteins: basidiomycete homol 100.0
PF00314213 Thaumatin: Thaumatin family; InterPro: IPR001938 T 100.0
cd09215157 Thaumatin-like the sweet-tasting protein, thaumati 100.0
cd09217151 TLP-P thaumatin and allergenic/antifungal thaumati 100.0
cd08961153 GH64-TLP-SF glycoside hydrolase family 64 (beta-1, 100.0
PF04681155 Bys1: Blastomyces yeast-phase-specific protein; In 97.92
cd09216 353 GH64-LPHase-like glycoside hydrolase family 64: la 95.06
cd09220 369 GH64-GluB-like glycoside hydrolase family 64: beta 90.14
>cd09218 TLP-PA allergenic/antifungal thaumatin-like proteins: plant and animal homologs Back     alignment and domain information
Probab=100.00  E-value=8.1e-78  Score=520.36  Aligned_cols=192  Identities=58%  Similarity=1.193  Sum_probs=184.3

Q ss_pred             EEEEEeCCCCcccceeecCCCCcccCCCCeeeCCCCeEEEeCCCCCceeEeeeccCCCCCCCCcccccCCCCCccccCCC
Q 047437           28 TFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCDGS  107 (223)
Q Consensus        28 t~ti~N~C~~tVWp~~~~~~g~~~l~~~g~~L~~G~s~s~~~p~~WsGriWaRtgCs~d~~g~~~C~TGdCgg~l~C~g~  107 (223)
                      +|||+|||+||||||+++++|++++..+||+|+||++++|++|++|+|||||||+|+||+.|+++|+||||+|+++|++.
T Consensus         1 tfti~N~C~~tVWp~~~~~~g~~~l~~gGf~L~~g~s~~~~vp~~WsGriWaRTgC~~~~~g~~~C~TGDCgg~l~C~g~   80 (219)
T cd09218           1 TFTIYNKCPFTVWPGILGNAGHPQLGGGGFELAPGQSRTIDAPSGWSGRFWGRTGCSFDSSGKGSCATGDCGGGLECNGA   80 (219)
T ss_pred             CEEEEECCCCCccceecCCCCCCCCCCCCEEcCCCCeEEEeCCCCcceeeeeccCCCCCCCCccccccCCCCCeeecCCC
Confidence            59999999999999999999999998899999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCCceeEEEEecCCCCCceeeeecccccCcceeeeecCCCCCCCCCCccCcccCCCCccccccCCCCCCCCceeecCc
Q 047437          108 GATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKS  187 (223)
Q Consensus       108 g~~ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~~C~~~~C~~dl~~~CP~~l~v~~~~~~~~g~vv~C~S  187 (223)
                      +++||+|||||+|+..+++|||||||||||||||+|+|+++.+.|+.++|.+|||+.||.||||+++    +|+||||||
T Consensus        81 ~g~pP~TlaEftl~~~~~~d~YdvSlVdGfNlP~~i~P~~~~~~C~~~~C~~din~~CP~~L~v~~~----~g~vv~C~S  156 (219)
T cd09218          81 GGAPPATLAEFTLGGSGGQDFYDVSLVDGYNLPVSITPQGGSGGCRTAGCVADLNAVCPAELQVKNS----GGRVVACKS  156 (219)
T ss_pred             CCCCCceeEEEEeccCCCCcceeeeeeccccCCEEEEecCCCCCCCCCcccCcccccCCHHHeeccC----CCcEeeecC
Confidence            8899999999999876789999999999999999999987666899999999999999999999864    488999999


Q ss_pred             hhhhhCCCCcccCCCCCCCCCCCCChhHHHHHhhCC
Q 047437          188 ACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP  223 (223)
Q Consensus       188 aC~~~~~~~~CC~G~~~~p~~C~pt~ys~~FK~~CP  223 (223)
                      ||++|++|||||||+|++|++|+|++||++||++||
T Consensus       157 aC~~f~~~~~CC~g~~~~p~~C~pt~ys~~FK~~CP  192 (219)
T cd09218         157 ACLAFNTDEYCCRGAYGTPETCKPTTYSRLFKNACP  192 (219)
T ss_pred             HHHhhCCccceecCCCCCCCcCCCcchhHHHHhhCc
Confidence            999999999999999999999999999999999998



This subfamily is represented by the thaumatin-like proteins (TLPs), Cherry Allergen Pru Av 2 TLP, Peach PpAZ44 TLP (a propylene-induced TLP in abscission), the Caenorhabditis elegans thaumatin family member (thn-6), and other plant and animal homologs. TLPs are involved in host defense and a wide range of developmental processes in fungi, plants, and animals. Due to their inducible expression by environmental stresses such as pathogen/pest attack, drought and cold, plant TLPs are classified as the pathogenesis-related (PR) protein family 5 (PR5). Several members of the plant TLP family have been reported as food allergens from fruits (i.e., cherry, Pru av 2; bell pepper, Cap a1; tomatoes, Lyc e NP24) and pollen allergens from conifers (i.e., mountain cedar, Jun a 3; Arizona cypress, Cup a3; Japanese cedar, Cry j3). TLPs are three-domain, crescent-fold structures with either an electronegative, ele

>smart00205 THN Thaumatin family Back     alignment and domain information
>cd09219 TLP-F thaumatin-like proteins: basidiomycete homologs Back     alignment and domain information
>PF00314 Thaumatin: Thaumatin family; InterPro: IPR001938 Thaumatin [] is an intensely sweet-tasting protein, 100 000 times sweeter than sucrose on a molar basis [] found in berries from Thaumatococcus daniellii, a tropical flowering plant known as Katemfe, it is induced by attack by viroids, which are single-stranded unencapsulated RNA molecules that do not code for protein Back     alignment and domain information
>cd09215 Thaumatin-like the sweet-tasting protein, thaumatin, and thaumatin-like proteins involved in host defense Back     alignment and domain information
>cd09217 TLP-P thaumatin and allergenic/antifungal thaumatin-like proteins: plant homologs Back     alignment and domain information
>cd08961 GH64-TLP-SF glycoside hydrolase family 64 (beta-1,3-glucanases which produce specific pentasaccharide oligomers) and thaumatin-like proteins Back     alignment and domain information
>PF04681 Bys1: Blastomyces yeast-phase-specific protein; InterPro: IPR006771 The pathogenic dimorphic fungal organism Blastomyces dermatitidis exists as a budding yeast at 37 degrees C and as a mycelium at 25 degrees C Back     alignment and domain information
>cd09216 GH64-LPHase-like glycoside hydrolase family 64: laminaripentaose-producing, beta-1,3-glucanase (LPHase)-like Back     alignment and domain information
>cd09220 GH64-GluB-like glycoside hydrolase family 64: beta-1,3-glucanase B (GluB)-like Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
3zs3_A222 High Resolution Structure Of Mal D 2, The Thaumatin 1e-47
2ahn_A222 High Resolution Structure Of A Cherry Allergen Pru 1e-46
1du5_A206 The Crystal Structure Of Zeamatin. Length = 206 1e-35
1z3q_A200 Resolution Of The Structure Of The Allergenic And A 2e-33
1pcv_A205 Crystal Structure Of Osmotin, A Plant Antifungal Pr 1e-30
4h8t_A198 Structure Of Haze Forming Proteins In White Wines: 4e-30
2i0w_A207 Crystal Structure Analysis Of Np24-I, A Thaumatin-L 9e-30
1aun_A208 Pathogenesis-Related Protein 5d From Nicotiana Taba 4e-28
3aok_A207 Crystal Structure Of Sweet-Tasting Protein Thaumati 4e-28
1kwn_A207 1.2 A Structure Of Thaumatin Crystallized In Gel Le 9e-28
2blr_A206 Thaumatin Before A High Dose X-Ray "burn" Length = 1e-27
1thv_A207 The Structures Of Three Crystal Forms Of The Sweet 1e-27
1rqw_A207 Thaumatin Structure At 1.05 A Resolution Length = 2 1e-27
2d8o_A207 Structure Of Vil-Thaumatin Length = 207 3e-27
2d8p_A207 Structure Of Hyper-Vil-Thaumatin Length = 207 9e-26
3g7m_A151 Structure Of The Thaumatin-Like Xylanase Inhibitor 9e-13
>pdb|3ZS3|A Chain A, High Resolution Structure Of Mal D 2, The Thaumatin Like Food Allergen From Apple Length = 222 Back     alignment and structure

Iteration: 1

Score = 186 bits (471), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 93/198 (46%), Positives = 122/198 (61%), Gaps = 5/198 (2%) Query: 27 STFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFD 86 + T TNNCP T+WPGTL G PQL TGF+L S S + + WSGR W RT CS D Sbjct: 1 AKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTD 60 Query: 87 EFGVGSCQTGDCG-GRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEP 145 G +C+T DCG G++ C+G+GA PPA+L EIT+ +D+YDVS+VDG+NLP+ P Sbjct: 61 AAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAP 120 Query: 146 RGVYGACNATGCASDINMGCPKELQXXXXXXXXXXXXIACKSACEAFGLDQYCCSGEFAN 205 +G G C + C +++N CP LQ I+CKSAC AFG +YCC+ Sbjct: 121 QGGTGECKPSSCPANVNKVCPAPLQ----VKAADGSVISCKSACLAFGDSKYCCTPPNNT 176 Query: 206 PTTCRPSFYSSIFKRACP 223 P TC P+ YS IF++ CP Sbjct: 177 PETCPPTEYSEIFEKQCP 194
>pdb|2AHN|A Chain A, High Resolution Structure Of A Cherry Allergen Pru Av 2 Length = 222 Back     alignment and structure
>pdb|1DU5|A Chain A, The Crystal Structure Of Zeamatin. Length = 206 Back     alignment and structure
>pdb|1Z3Q|A Chain A, Resolution Of The Structure Of The Allergenic And Antifungal Banana Fruit Thaumatin-Like Protein At 1.7a Length = 200 Back     alignment and structure
>pdb|1PCV|A Chain A, Crystal Structure Of Osmotin, A Plant Antifungal Protein Length = 205 Back     alignment and structure
>pdb|4H8T|A Chain A, Structure Of Haze Forming Proteins In White Wines: Vitis Vinifera Thaumatin-Like Proteins Length = 198 Back     alignment and structure
>pdb|2I0W|A Chain A, Crystal Structure Analysis Of Np24-I, A Thaumatin-Like Protein Length = 207 Back     alignment and structure
>pdb|1AUN|A Chain A, Pathogenesis-Related Protein 5d From Nicotiana Tabacum Length = 208 Back     alignment and structure
>pdb|3AOK|A Chain A, Crystal Structure Of Sweet-Tasting Protein Thaumatin Ii Length = 207 Back     alignment and structure
>pdb|1KWN|A Chain A, 1.2 A Structure Of Thaumatin Crystallized In Gel Length = 207 Back     alignment and structure
>pdb|2BLR|A Chain A, Thaumatin Before A High Dose X-Ray "burn" Length = 206 Back     alignment and structure
>pdb|1THV|A Chain A, The Structures Of Three Crystal Forms Of The Sweet Protein Thaumatin Length = 207 Back     alignment and structure
>pdb|1RQW|A Chain A, Thaumatin Structure At 1.05 A Resolution Length = 207 Back     alignment and structure
>pdb|2D8O|A Chain A, Structure Of Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|2D8P|A Chain A, Structure Of Hyper-Vil-Thaumatin Length = 207 Back     alignment and structure
>pdb|3G7M|A Chain A, Structure Of The Thaumatin-Like Xylanase Inhibitor Tlxi Length = 151 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query223
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 6e-64
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 2e-55
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 3e-49
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 9e-47
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 3e-45
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 5e-39
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Length = 222 Back     alignment and structure
 Score =  197 bits (500), Expect = 6e-64
 Identities = 96/198 (48%), Positives = 122/198 (61%), Gaps = 5/198 (2%)

Query: 27  STFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFD 86
           +T +  NNCPY +WPGTL     PQL TTGF+L S  S ++ +   W+GR WARTGCS D
Sbjct: 1   ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTD 60

Query: 87  EFGVGSCQTGDCG-GRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEP 145
             G   C T DC  G++ C+G+GA PPA+L E  +  G  +DFYDVS+VDG+NLP+   P
Sbjct: 61  ASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTP 120

Query: 146 RGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFAN 205
           +G  G C    C +++N  CP ELQ  G     +G V+AC SAC  FG  QYCC+     
Sbjct: 121 QGGTGDCKTASCPANVNAVCPSELQKKG----SDGSVVACLSACVKFGTPQYCCTPPQNT 176

Query: 206 PTTCRPSFYSSIFKRACP 223
           P TC P+ YS IF  ACP
Sbjct: 177 PETCPPTNYSEIFHNACP 194


>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Length = 206 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Length = 206 Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Length = 200 Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Length = 208 Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Length = 151 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query223
2ahn_A222 Thaumatin-like protein; allergen; 1.30A {Prunus av 100.0
1du5_A206 Zeamatin; beta sandwich, antifungal protein; 2.50A 100.0
2vhk_A206 Thaumatin-I; kinetics of crystallization, chiralit 100.0
1aun_A208 PR-5D; antifungal protein, pathogenesis-related pr 100.0
1z3q_A200 Thaumatin-like protein; beta sandwich, antifungal 100.0
3g7m_A151 Xylanase inhibitor TL-XI; beta-sheets, xylan degra 100.0
3gd0_A 367 Laminaripentaose-producing beta-1,3-guluase (lphas 93.14
4aor_D37 Trypsin inhibitor 3; hydrolase-inhibitor complex, 81.0
>2ahn_A Thaumatin-like protein; allergen; 1.30A {Prunus avium} Back     alignment and structure
Probab=100.00  E-value=5e-79  Score=527.80  Aligned_cols=193  Identities=50%  Similarity=1.034  Sum_probs=185.8

Q ss_pred             eEEEEEeCCCCcccceeecCCCCcccCCCCeeeCCCCeEEEeCCCCCceeEeeeccCCCCCCCCcccccCCCC-CccccC
Q 047437           27 STFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPGWSGRIWARTGCSFDEFGVGSCQTGDCG-GRLQCD  105 (223)
Q Consensus        27 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~~g~~L~~G~s~s~~~p~~WsGriWaRtgCs~d~~g~~~C~TGdCg-g~l~C~  105 (223)
                      ++|||+|+|+|||||++++++|++++.++||+|+||++++|.+|++|+|||||||+|+||++|+++|+||||+ |.|+|+
T Consensus         1 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~gG~~L~~G~s~s~~~p~~WsGRiWgRTgC~~d~~g~~~C~TGdCgsg~l~C~   80 (222)
T 2ahn_A            1 ATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCN   80 (222)
T ss_dssp             CEEEEEECSSSCBEEEEEEGGGCCCCSCSBCCBCTTCEEEEECCSSEEEEEEEEEEEEECTTSCEEEEESCCCSSSSSCT
T ss_pred             CEEEEEeCCCCCCCCEecCCCCCCccCCCcEEcCCCCEEEEecCCCcceeEEeccccCCCCCCCcccccCCccCCceecC
Confidence            5899999999999999999999999989999999999999999999999999999999999999999999999 999999


Q ss_pred             CCCCCCCceeEEEEecCCCCCceeeeecccccCcceeeeecCCCCCCCCCCccCcccCCCCccccccCCCCCCCCceeec
Q 047437          106 GSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIAC  185 (223)
Q Consensus       106 g~g~~ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~~C~~~~C~~dl~~~CP~~l~v~~~~~~~~g~vv~C  185 (223)
                      +.+++||+|||||+|++.+++|||||||||||||||+|+|+++.+.|+.++|.+|||..||+||||++.    +|+||||
T Consensus        81 g~~g~pPaTLaEftl~~~~~~dfYDVSlVDGfNlPm~i~P~~g~~~C~~~~C~~dln~~CP~eL~v~~~----~G~~v~C  156 (222)
T 2ahn_A           81 GNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTGDCKTASCPANVNAVCPSELQKKGS----DGSVVAC  156 (222)
T ss_dssp             TCCCCSSCCEEEEEECSTTCEEEEEEECTTCBSSCEEEEEESCBSCCCCEEECSCGGGGCCGGGEEECT----TSCEEEE
T ss_pred             CCCCCCCceeeeEEecCCCCCceeeeecccccccceEEEecCCCCCcccCcccCchhhhCCHHHeeecC----CCcEecc
Confidence            988899999999999987789999999999999999999998777899999999999999999999764    5899999


Q ss_pred             CchhhhhCCCCcccCCCCCCCCCCCCChhHHHHHhhCC
Q 047437          186 KSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP  223 (223)
Q Consensus       186 ~SaC~~~~~~~~CC~G~~~~p~~C~pt~ys~~FK~~CP  223 (223)
                      ||||++|++|||||||+|++|++|+|++||++||++||
T Consensus       157 ~saC~af~~~~yCC~g~~~~p~~C~pt~ys~~FK~~CP  194 (222)
T 2ahn_A          157 LSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACP  194 (222)
T ss_dssp             CCHHHHHCCHHHHCCTTSCSTTTSCCCHHHHHHHHHCT
T ss_pred             cccccccCCCccccCCCCCCCCCCCcchHHHHHhhcCc
Confidence            99999999999999999999999999999999999998



>1du5_A Zeamatin; beta sandwich, antifungal protein; 2.50A {Zea mays} SCOP: b.25.1.1 Back     alignment and structure
>2vhk_A Thaumatin-I; kinetics of crystallization, chirality, temperature, microbatch, plant protein, sweet protein; HET: TLA; 0.94A {Thaumatococcus daniellii} PDB: 2blu_A* 2blr_A* 2wbz_A 3n02_A* 3n03_A* 2vhr_A* 1lr2_A* 1lr3_A* 1lxz_A* 1ly0_A* 1pp3_A 1thi_A 2oqn_A* 1kwn_A* 2vi1_A 2vi2_A* 2vi3_A* 2vi4_A* 2vu6_A 2vu7_A* ... Back     alignment and structure
>1aun_A PR-5D; antifungal protein, pathogenesis-related protein, osmotin, thaumatin-like protein; 1.80A {Nicotiana tabacum} SCOP: b.25.1.1 PDB: 2i0w_A 1pcv_A Back     alignment and structure
>1z3q_A Thaumatin-like protein; beta sandwich, antifungal protein; 1.70A {Musa acuminata} Back     alignment and structure
>3g7m_A Xylanase inhibitor TL-XI; beta-sheets, xylan degradation, hydrolase inhibitor; HET: GOL; 2.91A {Triticum aestivum} Back     alignment and structure
>3gd0_A Laminaripentaose-producing beta-1,3-guluase (lphase); glycoside hydrolase, 3- glucnase; 1.62A {Streptomyces matensis} PDB: 3gd9_A* Back     alignment and structure
>4aor_D Trypsin inhibitor 3; hydrolase-inhibitor complex, miniprotein scaffold, knottins, protease inhibitor; HET: GOL MES; 1.70A {Spinacia oleracea} PDB: 4aoq_D* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 223
d1du5a_206 b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4 2e-62
d1rqwa_207 b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus d 2e-61
d1auna_208 b.25.1.1 (A:) Pathogenesis-related protein 5d {Com 4e-61
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Length = 206 Back     information, alignment and structure

class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
 Score =  191 bits (487), Expect = 2e-62
 Identities = 83/197 (42%), Positives = 107/197 (54%), Gaps = 21/197 (10%)

Query: 28  TFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPG-WSGRIWARTGCSFD 86
            FT+ N CP+T+W  ++   G       G QL  G+S RI +  G  + RIWARTGC FD
Sbjct: 2   VFTVVNQCPFTVWAASVPVGG-------GRQLNRGESWRITAPAGTTAARIWARTGCKFD 54

Query: 87  EFGVGSCQTGDCGGRLQCDGSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPR 146
             G GSC+TGDCGG LQC G G   P +L E  L + N+ DF+D+S++DG+N+P+   P 
Sbjct: 55  ASGRGSCRTGDCGGVLQCTGYGR-APNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPD 113

Query: 147 GVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIACKSACEAFGLDQYCCSGEFANP 206
           G  G      CA D+N  CP EL+  G           C +AC  F  D+YCC G     
Sbjct: 114 GGSGCSRGPRCAVDVNARCPAELRQDGV----------CNNACPVFKKDEYCCVGSA--A 161

Query: 207 TTCRPSFYSSIFKRACP 223
             C P+ YS  FK  CP
Sbjct: 162 NDCHPTNYSRYFKGQCP 178


>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Length = 207 Back     information, alignment and structure
>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query223
d1du5a_206 Zeamatin {Maize (Zea mays) [TaxId: 4577]} 100.0
d1auna_208 Pathogenesis-related protein 5d {Common tobacco (N 100.0
d1rqwa_207 Thaumatin {Ketemfe (Thaumatococcus daniellii) [Tax 100.0
>d1du5a_ b.25.1.1 (A:) Zeamatin {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
class: All beta proteins
fold: Osmotin, thaumatin-like protein
superfamily: Osmotin, thaumatin-like protein
family: Osmotin, thaumatin-like protein
domain: Zeamatin
species: Maize (Zea mays) [TaxId: 4577]
Probab=100.00  E-value=8.4e-69  Score=457.61  Aligned_cols=177  Identities=46%  Similarity=0.962  Sum_probs=166.4

Q ss_pred             eEEEEEeCCCCcccceeecCCCCcccCCCCeeeCCCCeEEEeCCCC-CceeEeeeccCCCCCCCCcccccCCCCCccccC
Q 047437           27 STFTITNNCPYTIWPGTLAGSGTPQLLTTGFQLESGQSVRIPSVPG-WSGRIWARTGCSFDEFGVGSCQTGDCGGRLQCD  105 (223)
Q Consensus        27 ~t~ti~N~C~~tVWp~~~~~~g~~~l~~~g~~L~~G~s~s~~~p~~-WsGriWaRtgCs~d~~g~~~C~TGdCgg~l~C~  105 (223)
                      ++|||+|||+|||||++++.       ++||+|+||+++++.+|++ |+|||||||||+||++|+++|+||||++.++|+
T Consensus         1 A~fti~N~C~~tvWp~~~p~-------~gg~~L~~G~s~~~~vp~~~w~GRiW~RTgC~~d~~G~~~C~TGdCgg~l~C~   73 (206)
T d1du5a_           1 AVFTVVNQCPFTVWAASVPV-------GGGRQLNRGESWRITAPAGTTAARIWARTGCKFDASGRGSCRTGDCGGVLQCT   73 (206)
T ss_dssp             CEEEEEECSSSCEEEEEETT-------TEEEEECTTCEEEEECCTTCCSEEEEEECSEEECTTSBEEESSSCCTTBSSCC
T ss_pred             CEEEEEeCCCCCcccccccC-------CCCeecCCCCeEEEecCCCCcccceecccCCccCCCCCcccccCCCCCeEeCC
Confidence            48999999999999999864       3699999999999999986 899999999999999999999999999999999


Q ss_pred             CCCCCCCceeEEEEecCCCCCceeeeecccccCcceeeeecCCCCCCCCCCccCcccCCCCccccccCCCCCCCCceeec
Q 047437          106 GSGATPPASLFEITLGKGNDKDFYDVSIVDGYNLPLVAEPRGVYGACNATGCASDINMGCPKELQVVGGEGTREGEVIAC  185 (223)
Q Consensus       106 g~g~~ppaTlaEftl~~~~~~d~YDVSlVdG~NlP~~i~p~~~~~~C~~~~C~~dl~~~CP~~l~v~~~~~~~~g~vv~C  185 (223)
                      +. +.||+|||||+|++.+++|||||||||||||||+|+|+++++.|+.++|.+|||..||.||+++.          +|
T Consensus        74 ~~-g~pP~tlaEftl~~~~~~d~YdvSlVDG~NlP~~i~P~~~~~~c~~~~C~~dln~~CP~~l~~~~----------~C  142 (206)
T d1du5a_          74 GY-GRAPNTLAEYALKQFNNLDFFDISLIDGFNVPMSFLPDGGSGCSRGPRCAVDVNARCPAELRQDG----------VC  142 (206)
T ss_dssp             SC-CCSSCCEEEEEEEEGGGEEEEEEECTTCBCSCEEEEECSSSSCCCCCEECSCTTTTCCGGGEETT----------EE
T ss_pred             CC-CCCCceeEEEEecCCCCcceeecceecccccceEeecCCCCCCcCCCcccccccccCcHhhccCC----------CC
Confidence            85 57999999999997778999999999999999999999988889999999999999999999864          79


Q ss_pred             CchhhhhCCCCcccCCCCCCCCCCCCChhHHHHHhhCC
Q 047437          186 KSACEAFGLDQYCCSGEFANPTTCRPSFYSSIFKRACP  223 (223)
Q Consensus       186 ~SaC~~~~~~~~CC~G~~~~p~~C~pt~ys~~FK~~CP  223 (223)
                      ||||.+|++|||||||++  +++|+|++||++||++||
T Consensus       143 ~saC~~~~~~~~CC~g~~--~~~c~pt~ys~~FK~~CP  178 (206)
T d1du5a_         143 NNACPVFKKDEYCCVGSA--ANDCHPTNYSRYFKGQCP  178 (206)
T ss_dssp             CCHHHHHCCHHHHCCGGG--GGGCCCCHHHHHHHHHCT
T ss_pred             CCcccccCCCcccccCCC--CCCCCcchHHHHHHhhCC
Confidence            999999999999999976  679999999999999998



>d1auna_ b.25.1.1 (A:) Pathogenesis-related protein 5d {Common tobacco (Nicotiana tabacum) [TaxId: 4097]} Back     information, alignment and structure
>d1rqwa_ b.25.1.1 (A:) Thaumatin {Ketemfe (Thaumatococcus daniellii) [TaxId: 4621]} Back     information, alignment and structure