Citrus Sinensis ID: 047491

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200------
Protein Sequence
MENYEAAATRNPSKVTSSRAGSSSPPPISANSSAPPPVIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLYKEMGKSPQPNSPQSVDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccccccccHHHHHHHHHHcHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccEEccccccccHHHHHHHHHHHcHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MENYEaaatrnpskvtssragssspppisanssapppvimspcAACKILRRRCAdkcvlapyfpptepakftiahrvFGASNIIKFLQelpesqradAVSSMVYEASarirdpvygcAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLYKEmgkspqpnspqsvdhfitspespeanpcsffednnlsgslwepalwt
Flexible Loop (DISEMBL)
menyeaaatrnpskvtssragssspppisanssapppvIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLYKEMGKSPQPNSPQSVDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT
Low Complexity Region (SEG)
MENYEAAATRNPSKVTssragssspppisanssapppVIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSElqaqlakaqaEVVNMQCQQANLVALLYKEMGKSPQPNSPQSVDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT
Disordered region (IsUnstruct)
*************************************VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELP*****DAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLYK************************************************
Disordered Region (DISOPRED)
*******************************************AACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQ***************************************************SLWEPALWT
Disordered Region (DISEMBL)
*********************************APPPVIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPE**********VYEASARIRDPVYGCAGAICQLQKQV************EVVNMQCQQANLVALLYKEM***********VDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT
Disordered Region (DISPRO)
***************************************MSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLYKEMGK************************C********SGSLWEPALW*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MENYEAAATRNPSKVTSSRAGSSSPPPISANSSAPPPVIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAxxxxxxxxxxxxxxxxxxxxxxxxxxxxQANLVALLYKEMGKSPQPNSPQSVDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	206	2.2.26 [Sep-21-2011]
Q9SK08	232	LOB domain-containing pro	yes	no	0.810	0.719	0.663	4e-61
Q9LQR0	190	LOB domain-containing pro	no	no	0.771	0.836	0.672	6e-60
Q8LBW3	193	LOB domain-containing pro	no	no	0.524	0.559	0.685	8e-40
Q9SA51	165	LOB domain-containing pro	no	no	0.519	0.648	0.620	7e-36
Q9SHE9	172	LOB domain-containing pro	no	no	0.533	0.639	0.7	7e-35
Q9AT61	268	LOB domain-containing pro	no	no	0.699	0.537	0.450	3e-34
Q9FKZ3	313	LOB domain-containing pro	no	no	0.635	0.418	0.519	2e-33
O64836	311	LOB domain-containing pro	no	no	0.504	0.334	0.576	3e-33
Q9FML4	186	Protein LATERAL ORGAN BOU	no	no	0.587	0.650	0.515	7e-33
Q8L8Q3	159	LOB domain-containing pro	no	no	0.5	0.647	0.592	6e-32

>sp|Q9SK08|LBD11_ARATH LOB domain-containing protein 11 OS=Arabidopsis thaliana GN=LBD11 PE=2 SV=2

 Score =  234 bits (596), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 122/184 (66%), Positives = 142/184 (77%), Gaps = 17/184 (9%)

Query: 38  VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
           V++SPCAACKILRRRCADKCVLAPYFPPT+PAKFTIAHRVFGASNIIKFLQELPESQR D
Sbjct: 51  VVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTD 110

Query: 98  AVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLY 157
           AV+SMVYEA AR+RDPVYGCAGAI  LQ+QVSELQAQLAK Q E+V MQ Q+++L+ L+Y
Sbjct: 111 AVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIY 170

Query: 158 ---------KEMGKSPQ--PNSPQSVDHFITSPESPEANPCSFFEDNNL----SGSLWEP 202
                    +E G+      +S +S D FI+SP+  E+N   F EDNN     S S W+P
Sbjct: 171 NMEQTKLSVQEQGQQKMSFESSFESGDEFISSPDE-ESNDLGFLEDNNNNNNSSMSWWDP 229

Query: 203 ALWT 206
            LWT
Sbjct: 230 -LWT 232

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQR0|LBD1_ARATH LOB domain-containing protein 1 OS=Arabidopsis thaliana GN=LBD1 PE=2 SV=1

 Score =  230 bits (586), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 115/171 (67%), Positives = 129/171 (75%), Gaps = 12/171 (7%)

Query: 38  VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
           V++SPCAACKILRRRCA++CVLAPYFPPT+PAKFTIAHRVFGASNIIKFLQELPESQR D
Sbjct: 29  VVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTD 88

Query: 98  AVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLY 157
           AV+SMVYEA ARIRDPVYGCAGAI  LQ+QVSELQAQLAKAQ E+VNMQ Q++NL+ L+Y
Sbjct: 89  AVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIY 148

Query: 158 KEMGKSPQPNSPQSVDHFITSPESPEANPCSFFED--NNLSGSLWEPALWT 206
               +  Q     S           E+N   F ED  N  S  LW   LWT
Sbjct: 149 NMDQQQKQEQDNMSF----------ESNDLGFLEDKSNTNSSMLWWDPLWT 189

Arabidopsis thaliana (taxid: 3702)

>sp|Q8LBW3|LBD12_ARATH LOB domain-containing protein 12 OS=Arabidopsis thaliana GN=LBD12 PE=2 SV=2

 Score =  163 bits (412), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 74/108 (68%), Positives = 89/108 (82%)

Query: 41  SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
           SPCA+CK+LRRRCA  C+ APYFPP +P KF I H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 101 SMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQ 148
           S+V+EA+AR+RDPVYGC GAI  LQ QVS+LQ QLA AQAE++ +Q Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA51|LBD3_ARATH LOB domain-containing protein 3 OS=Arabidopsis thaliana GN=LBD3 PE=2 SV=1

 Score =  150 bits (378), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 67/108 (62%), Positives = 84/108 (77%), Gaps = 1/108 (0%)

Query: 40  MSPCAACKILRRRCA-DKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADA 98
           +SPCA CK+LRR+C  D CV APYFP  EP KF I H++FGASN+ K LQEL E+ R+DA
Sbjct: 12  VSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDA 71

Query: 99  VSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQ 146
           V SMVYEA+ARI+DPVYGC G I  L +Q+  LQ QLA AQAE+++++
Sbjct: 72  VDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SHE9|LBD4_ARATH LOB domain-containing protein 4 OS=Arabidopsis thaliana GN=LBD4 PE=2 SV=1

 Score =  147 bits (370), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 77/110 (70%), Positives = 89/110 (80%)

Query: 41  SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
           SPCAACK+LRRRCA  CV +PYFP  EP KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 101 SMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQA 150
           SMVYEA+AR+RDPVYGC GAI  LQ+Q+  LQAQLA AQAEVV+++ +Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

Arabidopsis thaliana (taxid: 3702)

>sp|Q9AT61|LBD13_ARATH LOB domain-containing protein 13 OS=Arabidopsis thaliana GN=LBD13 PE=2 SV=2

 Score =  145 bits (365), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/151 (45%), Positives = 94/151 (62%), Gaps = 7/151 (4%)

Query: 6   AAATRNPSKVTSSRAGSSSPPPISANSSAPPPVIMSPCAACKILRRRCADKCVLAPYFPP 65
           A  T     V   R   + PP  + N+       ++PCAACK+LRRRCA++C  +PYF P
Sbjct: 23  AFETTTDHAVMGIRRHVAVPPGTTLNT-------VTPCAACKLLRRRCAEECPFSPYFSP 75

Query: 66  TEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQ 125
            EP KF   H+VFGASN+ K L E+ ESQR DA +S+VYEA+ R+RDP+YGC GAI  LQ
Sbjct: 76  HEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQ 135

Query: 126 KQVSELQAQLAKAQAEVVNMQCQQANLVALL 156
             +  LQ++L   + E++  + Q+A  +  L
Sbjct: 136 HHIQSLQSELTTVRTEILRHKYQEATTITSL 166

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FKZ3|LBD36_ARATH LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1

 Score =  142 bits (358), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/131 (51%), Positives = 83/131 (63%)

Query: 41  SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
           SPCAACK LRR+C  +CV APYFPP +P KF   H+VFGASN+ K L EL  +QR DAV+
Sbjct: 6   SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query: 101 SMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLYKEM 160
           S+ YEA AR+RDPVYGC G I  LQ ++ ++   L  A+ E+      QA L  L    M
Sbjct: 66  SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPILQPHFM 125

Query: 161 GKSPQPNSPQS 171
              PQP  P S
Sbjct: 126 SLPPQPQRPSS 136

Controls the proximal-distal patterning in petals and the adaxial-abaxial determination of leaves. Involved in the repression of the homeobox gene BP.

Arabidopsis thaliana (taxid: 3702)

>sp|O64836|LBD10_ARATH LOB domain-containing protein 10 OS=Arabidopsis thaliana GN=LBD10 PE=2 SV=1

 Score =  141 bits (356), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 60/104 (57%), Positives = 75/104 (72%)

Query: 41  SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
           +PCAACK+LRR+C  +CV APYFPPT P KF   HRVFGASN+ K L +LP  QR D V+
Sbjct: 4   TPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVN 63

Query: 101 SMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVN 144
           S+ YEA ARIRDP+YGC G I  LQ+ + ++Q  L  A+ E+V 
Sbjct: 64  SLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVG 107

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FML4|LOB_ARATH Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana GN=LOB PE=2 SV=1

 Score =  140 bits (353), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/132 (51%), Positives = 85/132 (64%), Gaps = 11/132 (8%)

Query: 41  SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
           SPCAACK LRR+C   C+ APYFPP EP KF   H++FGASN+ K L EL   QR DAV+
Sbjct: 10  SPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAVN 69

Query: 101 SMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQ------ANLVA 154
           S+ YEA AR+RDPVYGC GAI  LQ+QV  LQ +L  A A++ +            N+V 
Sbjct: 70  SLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGAPGNVVD 129

Query: 155 LLYKEMGKSPQP 166
           L+++     PQP
Sbjct: 130 LVFQ-----PQP 136

Not known; ectopic expression of LOB leads to alterations in the size and shape of leaves and floral organs and causes male and female sterility.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8L8Q3|LBD25_ARATH LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3

 Score =  137 bits (344), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 61/103 (59%), Positives = 75/103 (72%)

Query: 41  SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
           SPCAACK LRR+C   CV APYFPP EP KF   HR+FGASN+ K L E+   QR DAV+
Sbjct: 38  SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query: 101 SMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVV 143
           S+ YEA AR++DPVYGC GAI  LQ+QV  LQ +L +  A+++
Sbjct: 98  SLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLM 140

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
255570775	201	LOB domain-containing protein, putative	0.805	0.825	0.846	9e-74
356539104	204	PREDICTED: LOB domain-containing protein	0.820	0.828	0.790	4e-71
357453757	198	LOB domain protein [Medicago truncatula]	0.883	0.919	0.712	2e-70
356542557	202	PREDICTED: LOB domain-containing protein	0.820	0.836	0.773	5e-70
255642173	202	unknown [Glycine max]	0.820	0.836	0.767	2e-69
356557485	210	PREDICTED: LOB domain-containing protein	0.859	0.842	0.759	3e-69
225435213	1349	PREDICTED: carbamoyl-phosphate synthase	0.786	0.120	0.790	3e-69
297746206	204	unnamed protein product [Vitis vinifera]	0.800	0.808	0.782	7e-69
356547196	198	PREDICTED: LOB domain-containing protein	0.902	0.939	0.702	3e-68
225435217	202	PREDICTED: LOB domain-containing protein	0.800	0.816	0.766	6e-68

>gi|255570775|ref|XP_002526340.1| LOB domain-containing protein, putative [Ricinus communis] gi|223534299|gb|EEF36011.1| LOB domain-containing protein, putative [Ricinus communis]

 Score =  281 bits (720), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 143/169 (84%), Positives = 159/169 (94%), Gaps = 3/169 (1%)

Query: 38  VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
           VI+SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD
Sbjct: 36  VILSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 95

Query: 98  AVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLY 157
           AVSSMVYEASARIRDPVYGCAGAICQLQKQV+ELQAQLAKAQAEVVNMQCQQANL+AL+Y
Sbjct: 96  AVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLMALIY 155

Query: 158 KEMGKSPQPNSPQSVDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT 206
            EM +SPQ +S QS+D FIT+P+S ++NPC F +++NL G++WEP LWT
Sbjct: 156 MEMAQSPQQSSEQSIDDFITTPQSYQSNPC-FLDESNL-GTMWEP-LWT 201

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356539104|ref|XP_003538040.1| PREDICTED: LOB domain-containing protein 1-like [Glycine max]

 Score =  273 bits (697), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 136/172 (79%), Positives = 151/172 (87%), Gaps = 3/172 (1%)

Query: 38  VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
           V+MSPCAACKILRR+CA+KCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD
Sbjct: 33  VVMSPCAACKILRRKCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 92

Query: 98  AVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLY 157
           AV+SMVYEASARIRDPVYGCAGAICQLQKQV+ELQAQLAKAQ E+VNMQ QQANLVAL+ 
Sbjct: 93  AVTSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLAKAQGELVNMQLQQANLVALIC 152

Query: 158 KEMGKSPQPNSPQSVDHFITS-PESPEA--NPCSFFEDNNLSGSLWEPALWT 206
            EM +SPQ +  QSVD+FI++ P+S  A  +  +FFEDN    SLWE  LWT
Sbjct: 153 MEMAQSPQESPQQSVDNFISTPPQSGGAYQSGMNFFEDNTSLNSLWEQPLWT 204

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357453757|ref|XP_003597159.1| LOB domain protein [Medicago truncatula] gi|355486207|gb|AES67410.1| LOB domain protein [Medicago truncatula]

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 136/191 (71%), Positives = 159/191 (83%), Gaps = 9/191 (4%)

Query: 18  SRAGSSSPPPISANSSAPPPVIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRV 77
           S++ +SS PP++      P V+MSPCAACKILRRRCA+KCVLAPYFPPTEP+KFT AHRV
Sbjct: 15  SQSPTSSQPPMA------PQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPSKFTTAHRV 68

Query: 78  FGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAK 137
           FGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAIC LQK+V+ELQAQLAK
Sbjct: 69  FGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICHLQKEVNELQAQLAK 128

Query: 138 AQAEVVNMQCQQANLVALLYKEMGKSPQPNSPQSVDHFITSP--ESPEANPCSFFEDNNL 195
           +QAE++NMQ QQ+NL+AL+  EM ++P  +  QS+D+FI+SP   S   N  +FFEDN  
Sbjct: 129 SQAELINMQLQQSNLLALICMEMKETPNESPQQSMDNFISSPAYSSDYQNNLNFFEDNTS 188

Query: 196 SGSLWEPALWT 206
             SLWEP LWT
Sbjct: 189 QNSLWEP-LWT 198

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542557|ref|XP_003539733.1| PREDICTED: LOB domain-containing protein 1-like [Glycine max]

 Score =  269 bits (688), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 133/172 (77%), Positives = 147/172 (85%), Gaps = 3/172 (1%)

Query: 38  VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
           V+MSPCAACKILRRRCA+KCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD
Sbjct: 31  VVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 90

Query: 98  AVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLY 157
           AV+SMVYEASARIRDPVYGCAGAICQLQKQ++ELQAQLAKAQAE+VNMQ QQANLVAL+ 
Sbjct: 91  AVTSMVYEASARIRDPVYGCAGAICQLQKQINELQAQLAKAQAELVNMQIQQANLVALIC 150

Query: 158 KEMGKSPQPNSPQSVDHFITSPESPEA---NPCSFFEDNNLSGSLWEPALWT 206
            +M +SPQ +  Q VD FI++P        +  +FFEDN    SLWE  LWT
Sbjct: 151 MKMAQSPQESPQQLVDDFISTPPHSGGAYQSGMNFFEDNTSLNSLWEQPLWT 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255642173|gb|ACU21351.1| unknown [Glycine max]

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 132/172 (76%), Positives = 146/172 (84%), Gaps = 3/172 (1%)

Query: 38  VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
           V+MSPCAACKILRRRCA+KCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD
Sbjct: 31  VVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 90

Query: 98  AVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLY 157
           AV+SMVYEASARIRDPVYGCAGAICQLQKQ++ELQAQLAKAQAE+VN Q QQANLVAL+ 
Sbjct: 91  AVTSMVYEASARIRDPVYGCAGAICQLQKQINELQAQLAKAQAELVNTQIQQANLVALIC 150

Query: 158 KEMGKSPQPNSPQSVDHFITSPESPEA---NPCSFFEDNNLSGSLWEPALWT 206
            +M +SPQ +  Q VD FI++P        +  +FFEDN    SLWE  LWT
Sbjct: 151 MKMAQSPQESPQQLVDDFISTPPHSGGAYQSGMNFFEDNTSLNSLWEQPLWT 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557485|ref|XP_003547046.1| PREDICTED: LOB domain-containing protein 11-like [Glycine max]

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 142/187 (75%), Positives = 156/187 (83%), Gaps = 10/187 (5%)

Query: 29  SANSSAPPP---VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIK 85
           S+N+ + PP   V+MSPCAACKILRRRCA+KCVLAPYFP TEP+KFT AHRVFGASNIIK
Sbjct: 25  SSNTLSSPPQVQVVMSPCAACKILRRRCAEKCVLAPYFPLTEPSKFTTAHRVFGASNIIK 84

Query: 86  FLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNM 145
           FLQELPESQRADAV+SMVYEA ARIRDPVYGCAGAICQLQKQV+ELQAQLAKAQAEVVNM
Sbjct: 85  FLQELPESQRADAVASMVYEAGARIRDPVYGCAGAICQLQKQVNELQAQLAKAQAEVVNM 144

Query: 146 QCQQANLVALLYKEMG--KSPQPNSP-QSVDHFI--TSPESPEANPCSFFEDN-NLSGSL 199
           Q QQANLVAL+  EM   ++PQ  SP QSVD+FI  TS  S   N  +FFE+N N   SL
Sbjct: 145 QLQQANLVALICMEMAQTQTPQEYSPQQSVDNFISSTSHSSGYQNNLNFFEENTNNLNSL 204

Query: 200 WEPALWT 206
           WEP LWT
Sbjct: 205 WEP-LWT 210

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435213|ref|XP_002282042.1| PREDICTED: carbamoyl-phosphate synthase large chain-like [Vitis vinifera]

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 132/167 (79%), Positives = 146/167 (87%), Gaps = 5/167 (2%)

Query: 41   SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
            SPCAACKILRRRCA+KCVLAPYFPPT+PAKFT AHRVFGASNIIKFLQELPE QRADAVS
Sbjct: 1184 SPCAACKILRRRCAEKCVLAPYFPPTDPAKFTTAHRVFGASNIIKFLQELPEYQRADAVS 1243

Query: 101  SMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLYKEM 160
            SMVYEA ARIRDPVYGC GAICQLQKQVSELQAQLAKAQAE+VNMQCQQANL+A++  EM
Sbjct: 1244 SMVYEAQARIRDPVYGCTGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLIAIICMEM 1303

Query: 161  GKSPQPNS-PQSVDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT 206
              SPQP+S  QS+D FI SP S ++  C  F D+N++G+ WEP LWT
Sbjct: 1304 SGSPQPSSFQQSLDSFI-SPPSYQSGSC--FLDDNITGAAWEP-LWT 1346

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746206|emb|CBI16262.3| unnamed protein product [Vitis vinifera]

 Score =  265 bits (678), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 133/170 (78%), Positives = 149/170 (87%), Gaps = 5/170 (2%)

Query: 38  VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
           V++SPCAACKILRRRCA+KCVLAPYFPPT+PAKFT AHRVFGASNIIKFLQELPE QRAD
Sbjct: 36  VVLSPCAACKILRRRCAEKCVLAPYFPPTDPAKFTTAHRVFGASNIIKFLQELPEYQRAD 95

Query: 98  AVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVALLY 157
           AVSSMVYEA ARIRDPVYGC GAICQLQKQVSELQAQLAKAQAE+VNMQCQQANL+A++ 
Sbjct: 96  AVSSMVYEAQARIRDPVYGCTGAICQLQKQVSELQAQLAKAQAELVNMQCQQANLIAIIC 155

Query: 158 KEMGKSPQPNS-PQSVDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT 206
            EM  SPQP+S  QS+D FI SP S ++  C  F D+N++G+ WEP LWT
Sbjct: 156 MEMSGSPQPSSFQQSLDSFI-SPPSYQSGSC--FLDDNITGAAWEP-LWT 201

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547196|ref|XP_003542002.1| PREDICTED: LOB domain-containing protein 11-like [Glycine max]

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 142/202 (70%), Positives = 160/202 (79%), Gaps = 16/202 (7%)

Query: 13  SKVTSSRAGSSSPPPISANSSAPPP---VIMSPCAACKILRRRCADKCVLAPYFPPTEPA 69
           +  T S + +++P       S+PP    V+M PCAACKILRRRCA+KCVLAPYFPPTEPA
Sbjct: 5   TNTTFSHSSNTTP-------SSPPQQVQVVMIPCAACKILRRRCAEKCVLAPYFPPTEPA 57

Query: 70  KFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVS 129
           KFT AHRVFGASNIIKFLQELPESQRADAV+SMVYEA ARIRDPVYGCAGAIC LQKQV+
Sbjct: 58  KFTTAHRVFGASNIIKFLQELPESQRADAVASMVYEAGARIRDPVYGCAGAICHLQKQVN 117

Query: 130 ELQAQLAKAQAEVVNMQCQQANLVALLYKEMG--KSPQPNSPQSVDHFITSP--ESPEAN 185
           ELQAQLAKAQAEVVNMQ QQANLVAL+  EM   ++PQ +  QSVD+FI+SP   S   N
Sbjct: 118 ELQAQLAKAQAEVVNMQFQQANLVALICMEMAQTQTPQESPQQSVDNFISSPSHSSGYQN 177

Query: 186 PCSFFEDN-NLSGSLWEPALWT 206
             +FFE+N N   SLWEP LWT
Sbjct: 178 NLNFFEENTNNLNSLWEP-LWT 198

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435217|ref|XP_002282070.1| PREDICTED: LOB domain-containing protein 11 [Vitis vinifera] gi|297746208|emb|CBI16264.3| unnamed protein product [Vitis vinifera]

 Score =  262 bits (670), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 131/171 (76%), Positives = 148/171 (86%), Gaps = 6/171 (3%)

Query: 38  VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
           V++SPCAACKILRRRCADKCVLAPYFPPT+PAKFT AHRVFGASNIIKFLQELPE QRAD
Sbjct: 36  VVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTTAHRVFGASNIIKFLQELPEFQRAD 95

Query: 98  AVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVAL-- 155
           AVSSMVYEA ARIRDPVYGCAGAICQLQKQ+ ELQAQLAK QAE+VNMQCQQANLV +  
Sbjct: 96  AVSSMVYEAQARIRDPVYGCAGAICQLQKQLDELQAQLAKTQAELVNMQCQQANLVTMIC 155

Query: 156 LYKEMGKSPQPNSPQSVDHFITSPESPEANPCSFFEDNNLSGSLWEPALWT 206
           +  EM +SPQP+S +S+D  I SP+S ++N  SFF D++  G+ WEP LWT
Sbjct: 156 MEMEMSQSPQPSSEESLDSLI-SPQSYQSN--SFFLDDSNIGATWEP-LWT 202

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	206
TAIR|locus:2056578	232	LBD11 "LOB domain-containing p	0.810	0.719	0.619	9.2e-52
TAIR|locus:2026611	190	LBD1 "LOB domain-containing pr	0.771	0.836	0.631	3.2e-49
TAIR|locus:2197500	172	LBD4 "LOB domain-containing pr	0.747	0.895	0.484	4.6e-34
TAIR|locus:2060842	193	ASL5 [Arabidopsis thaliana (ta	0.524	0.559	0.611	2.5e-33
TAIR|locus:2046817	311	LBD10 "LOB domain-containing p	0.737	0.488	0.437	8.8e-31
TAIR|locus:2061828	224	LBD15 "LOB domain-containing p	0.708	0.651	0.448	8.8e-31
TAIR|locus:2174989	313	ASL1 "ASYMMETRIC LEAVES 2-like	0.635	0.418	0.503	1.1e-30
TAIR|locus:2065769	268	LBD13 "AT2G30340" [Arabidopsis	0.674	0.518	0.438	4.9e-30
TAIR|locus:2032931	165	ASL9 "ASYMMETRIC LEAVES 2-like	0.519	0.648	0.546	2.1e-29
TAIR|locus:2089184	159	LBD25 "LOB domain-containing p	0.427	0.553	0.647	9.1e-29

TAIR|locus:2056578 LBD11 "LOB domain-containing protein 11" [Arabidopsis thaliana (taxid:3702)]

 Score = 537 (194.1 bits), Expect = 9.2e-52, P = 9.2e-52
 Identities = 114/184 (61%), Positives = 134/184 (72%)

Query:    38 VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
             V++SPCAACKILRRRCADKCVLAPYFPPT+PAKFTIAHRVFGASNIIKFLQELPESQR D
Sbjct:    51 VVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTD 110

Query:    98 AVSSMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQCQQANLVALLY 157
             AV+SMVYEA AR+RDPVYGCAGAI  LQ+QVSE          E+V MQ Q+++L+ L+Y
Sbjct:   111 AVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIY 170

Query:   158 ---------KEMGKSPQP--NSPQSVDHFITSPESPEANPCSFFEDNN----LSGSLWEP 202
                      +E G+      +S +S D FI+SP+  E+N   F EDNN     S S W+P
Sbjct:   171 NMEQTKLSVQEQGQQKMSFESSFESGDEFISSPDE-ESNDLGFLEDNNNNNNSSMSWWDP 229

Query:   203 ALWT 206
              LWT
Sbjct:   230 -LWT 232

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2026611 LBD1 "LOB domain-containing protein 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 108/171 (63%), Positives = 124/171 (72%)

Query:    38 VIMSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRAD 97
             V++SPCAACKILRRRCA++CVLAPYFPPT+PAKFTIAHRVFGASNIIKFLQELPESQR D
Sbjct:    29 VVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTD 88

Query:    98 AVSSMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQCQQANLVALLY 157
             AV+SMVYEA ARIRDPVYGCAGAI  LQ+QVSE          E+VNMQ Q++NL+ L+Y
Sbjct:    89 AVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQRSNLLELIY 148

Query:   158 KEMGKSPQPNSPQSVDHFITSPESPEANPCSFFED--NNLSGSLWEPALWT 206
               M +  +    Q  D+      S E+N   F ED  N  S  LW   LWT
Sbjct:   149 N-MDQQQK----QEQDNM-----SFESNDLGFLEDKSNTNSSMLWWDPLWT 189

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2197500 LBD4 "LOB domain-containing protein 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
 Identities = 80/165 (48%), Positives = 99/165 (60%)

Query:    41 SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
             SPCAACK+LRRRCA  CV +PYFP  EP KF   HRVFGASN+ K LQELP  QR DAVS
Sbjct:    12 SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query:   101 SMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQCQQANLVALLYKEM 160
             SMVYEA+AR+RDPVYGC GAI  LQ+Q+            EVV+++ +Q+          
Sbjct:    72 SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFP------ 125

Query:   161 GKSPQPNSPQSVDHFITSPESPEANPCSF-----FEDNNLSGSLW 200
             G    P+SP S     +   SP+ N   F      ++ +L  S+W
Sbjct:   126 GHGLCPDSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMW 170

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009855 "determination of bilateral symmetry" evidence=RCA

GO:0009944 "polarity specification of adaxial/abaxial axis" evidence=RCA

GO:0010014 "meristem initiation" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

TAIR|locus:2060842 ASL5 [Arabidopsis thaliana (taxid:3702)]

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 66/108 (61%), Positives = 81/108 (75%)

Query:    41 SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
             SPCA+CK+LRRRCA  C+ APYFPP +P KF I H+VFGASN+ K LQELP  QRADAV+
Sbjct:     7 SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query:   101 SMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQCQ 148
             S+V+EA+AR+RDPVYGC GAI  LQ QVS+          E++ +Q Q
Sbjct:    67 SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

GO:0005634 "nucleus" evidence=ISM

GO:0003677 "DNA binding" evidence=TAS

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0010016 "shoot system morphogenesis" evidence=IMP

TAIR|locus:2046817 LBD10 "LOB domain-containing protein 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 67/153 (43%), Positives = 87/153 (56%)

Query:    41 SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
             +PCAACK+LRR+C  +CV APYFPPT P KF   HRVFGASN+ K L +LP  QR D V+
Sbjct:     4 TPCAACKLLRRKCTQECVFAPYFPPTNPQKFIFVHRVFGASNVTKILNDLPPDQREDTVN 63

Query:   101 SMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQCQQANLVALLYKEM 160
             S+ YEA ARIRDP+YGC G I  LQ+ + +          E+V      A +       +
Sbjct:    64 SLFYEAEARIRDPIYGCVGLISFLQQYLKKIQQDLLTAKEELVGYLGPDAVIPPPYLPPI 123

Query:   161 GKSPQPNSPQSVDHFITSPESPEANPCSFFEDN 193
             G +P PN   S++  +     P+  P    E N
Sbjct:   124 GNNPPPNFMMSMEG-MPPGVIPQGEPLMIREPN 155

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2061828 LBD15 "LOB domain-containing protein 15" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 66/147 (44%), Positives = 90/147 (61%)

Query:    40 MSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAV 99
             ++PCAACK+LRRRCA +C  +PYF P EP KF   H+VFGASN+ K L E+PESQRADA 
Sbjct:    43 ITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADAA 102

Query:   100 SSMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQCQQANLVALLYKE 159
             +S+VYEA+ R+RDPVYGC GAI  LQ+QV            E++  + ++A +  L+   
Sbjct:   103 NSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA-VATLIVPS 161

Query:   160 MGKSPQPNSPQSVDHFITSPESPEANP 186
               +    ++   V      P+ P   P
Sbjct:   162 NSQVAGFHNSGGVSVIAPPPQRPTTPP 188

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2174989 ASL1 "ASYMMETRIC LEAVES 2-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 66/131 (50%), Positives = 79/131 (60%)

Query:    41 SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
             SPCAACK LRR+C  +CV APYFPP +P KF   H+VFGASN+ K L EL  +QR DAV+
Sbjct:     6 SPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDAVN 65

Query:   101 SMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQCQQANLVALLYKEM 160
             S+ YEA AR+RDPVYGC G I  LQ ++ +          E+      QA L  L    M
Sbjct:    66 SLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATYVGPQAMLPILQPHFM 125

Query:   161 GKSPQPNSPQS 171
                PQP  P S
Sbjct:   126 SLPPQPQRPSS 136

GO:0005634 "nucleus" evidence=ISM

GO:0009965 "leaf morphogenesis" evidence=IMP

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP

GO:0009954 "proximal/distal pattern formation" evidence=IGI

GO:0048441 "petal development" evidence=IGI

TAIR|locus:2065769 LBD13 "AT2G30340" [Arabidopsis thaliana (taxid:3702)]

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 61/139 (43%), Positives = 84/139 (60%)

Query:    40 MSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAV 99
             ++PCAACK+LRRRCA++C  +PYF P EP KF   H+VFGASN+ K L E+ ESQR DA 
Sbjct:    50 VTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAA 109

Query:   100 SSMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQCQQANLVALLYKE 159
             +S+VYEA+ R+RDP+YGC GAI  LQ  +            E++  + Q+A  +  L   
Sbjct:   110 NSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNN 169

Query:   160 MGKSPQPNSPQSVDHFITS 178
                +   +S     H + S
Sbjct:   170 FNSTTTTSSVSCDQHALAS 188

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IDA

TAIR|locus:2032931 ASL9 "ASYMMETRIC LEAVES 2-like 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 59/108 (54%), Positives = 76/108 (70%)

Query:    40 MSPCAACKILRRRCA-DKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADA 98
             +SPCA CK+LRR+C  D CV APYFP  EP KF I H++FGASN+ K LQEL E+ R+DA
Sbjct:    12 VSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELSENHRSDA 71

Query:    99 VSSMVYEASARIRDPVYGCAGAICQLQKQVSEXXXXXXXXXXEVVNMQ 146
             V SMVYEA+ARI+DPVYGC G I  L +Q+            E+++++
Sbjct:    72 VDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIR 119

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2089184 LBD25 "LOB domain-containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 57/88 (64%), Positives = 66/88 (75%)

Query:    41 SPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVS 100
             SPCAACK LRR+C   CV APYFPP EP KF   HR+FGASN+ K L E+   QR DAV+
Sbjct:    38 SPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDAVN 97

Query:   101 SMVYEASARIRDPVYGCAGAICQLQKQV 128
             S+ YEA AR++DPVYGC GAI  LQ+QV
Sbjct:    98 SLAYEAEARLKDPVYGCVGAISVLQRQV 125

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SK08	LBD11_ARATH	No assigned EC number	0.6630	0.8106	0.7198	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00024478001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (204 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00037107001	SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (1679 aa)						•			0.899
	GSVIVG00035979001	SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (582 aa)						•			0.899
	GS1-2	RecName- Full=Glutamine synthetase cytosolic isozyme 2; EC=6.3.1.2; AltName- Full=Glutamate--am [...] (356 aa)						•			0.899
	gs	SubName- Full=Putative uncharacterized protein (Chromosome chr1 scaffold_5, whole genome shotgu [...] (356 aa)						•			0.899
	GSVIVG00027272001	SubName- Full=Chromosome chr19 scaffold_4, whole genome shotgun sequence; (403 aa)						•			0.899
	GSVIVG00023655001	RecName- Full=Glutamine synthetase; EC=6.3.1.2; (433 aa)						•			0.899
	GSVIVG00019881001	RecName- Full=Glutamine synthetase; EC=6.3.1.2; (432 aa)						•			0.899
	GS1-1	RecName- Full=Glutamine synthetase cytosolic isozyme 1; EC=6.3.1.2; AltName- Full=Glutamate--am [...] (356 aa)						•			0.899
	GSVIVG00034896001	SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (407 aa)						•			0.800
	GSVIVG00014587001	SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (261 aa)						•			0.800

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	206
pfam03195	101	pfam03195, DUF260, Protein of unknown function DUF	1e-50

>gnl|CDD|190559 pfam03195, DUF260, Protein of unknown function DUF260

 Score =  158 bits (403), Expect = 1e-50
 Identities = 59/100 (59%), Positives = 75/100 (75%)

Query: 42  PCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSS 101
           PCAACK LRR+C   CVLAPYFP  +PA+F   H++FGASN+ K L+ LP  QR DA+ S
Sbjct: 1   PCAACKHLRRKCPPDCVLAPYFPAEQPARFANVHKLFGASNVTKLLKALPPEQRDDAMRS 60

Query: 102 MVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAE 141
           ++YEA AR RDPVYGC G I  LQ+Q+ +LQA+LA  +A+
Sbjct: 61  LLYEADARARDPVYGCVGVIWSLQQQLEQLQAELALVKAQ 100

Length = 101

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	206
PF03195	101	DUF260: Protein of unknown function DUF260; InterP	100.0
PF06698	59	DUF1192: Protein of unknown function (DUF1192); In	86.16
COG3416	233	Uncharacterized protein conserved in bacteria [Fun	83.79
PRK10803	263	tol-pal system protein YbgF; Provisional	82.75

>PF03195 DUF260: Protein of unknown function DUF260; InterPro: IPR004883 The lateral organ boundaries (LOB) gene is expressed at the adaxial base of initiating lateral organs and encodes a plant-specific protein of unknown function

Probab=100.00  E-value=3.9e-50  Score=310.96  Aligned_cols=101  Identities=63%  Similarity=1.111  Sum_probs=99.5

Q ss_pred             CChHhHHhhhCCCCCCccccCCCCCCccchhhhhhhhchhhHHHHhhcCCCcchhhHHHHHHHhhhccccCCCCccHHHH
Q 047491           42 PCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAI  121 (206)
Q Consensus        42 ~CAACK~lRRrC~~~CilAPYFP~~~~~~F~~vhkvFG~sNI~k~Lq~lp~~~R~dAv~SLvYEA~aR~rDPVyGC~G~I  121 (206)
                      +|||||||||||+++|+||||||++++++|.+||||||++||+|||+++|+++|+++|+||+|||++|.+||||||+|+|
T Consensus         1 ~CaaCk~lRr~C~~~C~laPyFP~~~~~~F~~vhkvFG~sni~k~L~~~~~~~R~~a~~Sl~yEA~~R~~dPv~Gc~G~i   80 (101)
T PF03195_consen    1 PCAACKHLRRRCSPDCVLAPYFPADQPQRFANVHKVFGVSNISKMLQELPPEQREDAMRSLVYEANARARDPVYGCVGII   80 (101)
T ss_pred             CChHHHHHhCCCCCCCcCCCCCChhHHHHHHHHHHHHchhHHHHHHHhCCccchhhHHHHHHHHHHhhccCCCcchHHHH
Confidence            69999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHH
Q 047491          122 CQLQKQVSELQAQLAKAQAEV  142 (206)
Q Consensus       122 ~~Lq~qi~~lqaeLa~aq~eL  142 (206)
                      +.||+||+++++||+.+++||
T Consensus        81 ~~L~~ql~~~~~el~~~~~~l  101 (101)
T PF03195_consen   81 SQLQQQLQQLQAELALVRAQL  101 (101)
T ss_pred             HHHHHHHHHHHHHHHHHHccC
Confidence            999999999999999999875

The N-terminal one half of the LOB protein contains a conserved approximately 100-amino acid domain (the LOB domain) that is present in 42 other Arabidopsis thaliana proteins and in proteins from a variety of other plant species. Genes encoding LOB domain (LBD) proteins are expressed in a variety of temporal- and tissue-specific patterns, suggesting that they may function in diverse processes [] The LOB domain contains conserved blocks of amino acids that identify the LBD gene family. In particular, a conserved C-x(2)-C-x(6)-C-x(3)-C motif, which is defining feature of the LOB domain, is present in all LBD proteins. It is possible that this motif forms a new zinc finger [].

>PF06698 DUF1192: Protein of unknown function (DUF1192); InterPro: IPR009579 This family consists of several short, hypothetical, bacterial proteins of around 60 residues in length

Probab=86.16  E-value=2.9  Score=30.28  Aligned_cols=35  Identities=23%  Similarity=0.407  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047491          121 ICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVAL  155 (206)
Q Consensus       121 I~~Lq~qi~~lqaeLa~aq~eL~~~q~q~a~~~~~  155 (206)
                      |-.|+..|..|++|++++++++...+.+.+..-++
T Consensus        23 v~EL~~RIa~L~aEI~R~~~~~~~K~a~r~AAeal   57 (59)
T PF06698_consen   23 VEELEERIALLEAEIARLEAAIAKKSASRAAAEAL   57 (59)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            67899999999999999999998877666555444

The function of this family is unknown.

>COG3416 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=83.79  E-value=3.9  Score=36.77  Aligned_cols=65  Identities=17%  Similarity=0.274  Sum_probs=54.2

Q ss_pred             hHHHHhhcCCCcchhhHHHHHHHhhhccccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047491           82 NIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQ  146 (206)
Q Consensus        82 NI~k~Lq~lp~~~R~dAv~SLvYEA~aR~rDPVyGC~G~I~~Lq~qi~~lqaeLa~aq~eL~~~q  146 (206)
                      |+..-|+......|+..+..||-||-++.-|--|=-+-.|..+++-|..++.+|+.++.+|+.+|
T Consensus        11 ~lf~rlk~a~~~~rD~~Ae~lI~~~~~~qP~a~Y~laQ~vliqE~ALk~a~~~i~eLe~ri~~lq   75 (233)
T COG3416          11 NLFHRLKKAEANERDPQAEALIAEAVAKQPDAAYYLAQRVLIQEQALKKASTQIKELEKRIAILQ   75 (233)
T ss_pred             HHHHHHhhcccCCCChHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            44555777778899999999999999999999998888888888888888888888888777655

>PRK10803 tol-pal system protein YbgF; Provisional

Probab=82.75  E-value=3.3  Score=36.73  Aligned_cols=44  Identities=23%  Similarity=0.363  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhcCC
Q 047491          119 GAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVA---LLYKEMGK  162 (206)
Q Consensus       119 G~I~~Lq~qi~~lqaeLa~aq~eL~~~q~q~a~~~~---~~~~~~~~  162 (206)
                      ..+..|++||+.||.|++.+|.++..++.|-.++.+   .+|.++|.
T Consensus        54 ~~~~~l~~ql~~lq~ev~~LrG~~E~~~~~l~~~~~rq~~~y~dld~  100 (263)
T PRK10803         54 QLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQIYLQIDS  100 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            466899999999999999999998877666555554   55677764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	206
2xdj_A	83	Uncharacterized protein YBGF; unknown function; 1.	85.75
4dzn_A	33	Coiled-coil peptide CC-PIL; de novo protein; HET:	83.66

>2xdj_A Uncharacterized protein YBGF; unknown function; 1.82A {Escherichia coli} PDB: 2wz7_A

Probab=85.75  E-value=2.1  Score=31.48  Aligned_cols=45  Identities=20%  Similarity=0.292  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhcCCCC
Q 047491          120 AICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVA---LLYKEMGKSP  164 (206)
Q Consensus       120 ~I~~Lq~qi~~lqaeLa~aq~eL~~~q~q~a~~~~---~~~~~~~~~~  164 (206)
                      ....|++||+.++.|++.++.++...+.+-..+..   -+|.|+|..-
T Consensus        21 ~~~~Lq~Ql~~Lq~Ev~~LRGqiE~~~~~l~ql~~rQrd~Y~dLD~Rl   68 (83)
T 2xdj_A           21 LLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS   68 (83)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46788999999999998888888777666555555   5677776544

>4dzn_A Coiled-coil peptide CC-PIL; de novo protein; HET: PHI; 1.59A {Synthetic} PDB: 4dzm_A* 4dzl_A* 4dzk_A 1u0i_A 1u0i_B

Probab=83.66  E-value=1.8  Score=27.06  Aligned_cols=28  Identities=21%  Similarity=0.527  Sum_probs=23.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047491          119 GAICQLQKQVSELQAQLAKAQAEVVNMQ  146 (206)
Q Consensus       119 G~I~~Lq~qi~~lqaeLa~aq~eL~~~q  146 (206)
                      |.|..|+++|..|+.|++.++-|++.++
T Consensus         2 geiaalkqeiaalkkeiaalkfeiaalk   29 (33)
T 4dzn_A            2 GEIAALKQEIAALKKEIAALKFEIAALK   29 (33)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            6788899999999999998888887654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	206
d1hcia4	114	alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}	85.2

>d1hcia4 a.7.1.1 (A:633-746) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Spectrin repeat-like
superfamily: Spectrin repeat
family: Spectrin repeat
domain: alpha-actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.20  E-value=0.85  Score=31.29  Aligned_cols=60  Identities=10%  Similarity=0.180  Sum_probs=51.3

Q ss_pred             hhHHHHHHHhhhccccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047491           96 ADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSELQAQLAKAQAEVVNMQCQQANLVAL  155 (206)
Q Consensus        96 ~dAv~SLvYEA~aR~rDPVyGC~G~I~~Lq~qi~~lqaeLa~aq~eL~~~q~q~a~~~~~  155 (206)
                      .+-+.+-+-|+..-+.+|++|-.+.|..+.++.+.++.+|..-+..+..+......|+..
T Consensus        14 a~~~~~Wi~e~~~~l~~~~~~~~~~ve~~l~~h~~~e~el~~~~~~i~~l~~~g~~L~~~   73 (114)
T d1hcia4          14 ANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEA   73 (114)
T ss_dssp             HHHHHHHHHHHHHHHHSCSCTTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            355666678888888999999999999999999999999999999999887777777663