Citrus Sinensis ID: 047536
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 237 | ||||||
| 224146715 | 466 | predicted protein [Populus trichocarpa] | 0.772 | 0.392 | 0.510 | 4e-44 | |
| 224146712 | 466 | predicted protein [Populus trichocarpa] | 0.772 | 0.392 | 0.510 | 8e-44 | |
| 224148197 | 467 | predicted protein [Populus trichocarpa] | 0.784 | 0.398 | 0.507 | 1e-43 | |
| 255553921 | 459 | Anthocyanin 5-aromatic acyltransferase, | 0.755 | 0.389 | 0.518 | 6e-41 | |
| 356549972 | 469 | PREDICTED: anthocyanin 5-aromatic acyltr | 0.784 | 0.396 | 0.465 | 1e-36 | |
| 356526530 | 469 | PREDICTED: anthocyanin 5-aromatic acyltr | 0.784 | 0.396 | 0.434 | 3e-36 | |
| 38194913 | 467 | anthocyanin acyltransferase [Phaseolus v | 0.784 | 0.398 | 0.424 | 4e-35 | |
| 388519815 | 192 | unknown [Lotus japonicus] | 0.772 | 0.953 | 0.427 | 6e-35 | |
| 224146710 | 445 | predicted protein [Populus trichocarpa] | 0.670 | 0.357 | 0.493 | 2e-34 | |
| 225447679 | 454 | PREDICTED: malonyl-coenzyme A:anthocyani | 0.789 | 0.411 | 0.412 | 2e-32 |
| >gi|224146715|ref|XP_002326110.1| predicted protein [Populus trichocarpa] gi|222862985|gb|EEF00492.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 126/190 (66%), Gaps = 7/190 (3%)
Query: 6 ARISTYVVTCAFMWVPWMKIQEAEEGTTGGQLDDDTLYHFMAPSDRRGRFELPFPLTYFG 65
+ST+VV CAF+WV +K QE E D+D +Y+F+ +D R R E+ P TYFG
Sbjct: 278 VHVSTFVVACAFIWVNMIKSQEKEASDL---FDNDKVYYFVFVADCRHRLEVKLPATYFG 334
Query: 66 NCLARLSASAKRSELIGSNGIVVAAKAIGRAICKLENGPLTGAENSLSHFIEKLKMPSLL 125
NCLA AK+SEL+G NGI++AA+ IG+ + +LE+G GAE +S + E + L
Sbjct: 335 NCLAICYVPAKKSELLGENGIIMAAREIGKKVKELESGVFVGAEKWISKWKE-VSEQGRL 393
Query: 126 VTVAGSPKFRVYDTDFGWGKPKKSEVGHI-GHGSFSLNECRDEEGQGGVEIGFVIGRHQL 184
VTVAGSPK R Y+TDFGWG+PKK+EV HI GSF L ECRD G GGVEIG + + Q+
Sbjct: 394 VTVAGSPKLRAYETDFGWGRPKKTEVPHIYASGSFHLCECRD--GGGGVEIGLALPQGQM 451
Query: 185 DFFNAIIEQG 194
D F+ I EQG
Sbjct: 452 DVFSGIFEQG 461
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224146712|ref|XP_002326109.1| predicted protein [Populus trichocarpa] gi|222862984|gb|EEF00491.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224148197|ref|XP_002336610.1| predicted protein [Populus trichocarpa] gi|222836314|gb|EEE74735.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255553921|ref|XP_002518001.1| Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis] gi|223542983|gb|EEF44519.1| Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356549972|ref|XP_003543364.1| PREDICTED: anthocyanin 5-aromatic acyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356526530|ref|XP_003531870.1| PREDICTED: anthocyanin 5-aromatic acyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|38194913|gb|AAR13301.1| anthocyanin acyltransferase [Phaseolus vulgaris] | Back alignment and taxonomy information |
|---|
| >gi|388519815|gb|AFK47969.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
| >gi|224146710|ref|XP_002326108.1| predicted protein [Populus trichocarpa] gi|222862983|gb|EEF00490.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225447679|ref|XP_002276090.1| PREDICTED: malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 237 | ||||||
| TAIR|locus:2024127 | 469 | AT1G03940 [Arabidopsis thalian | 0.784 | 0.396 | 0.366 | 3.9e-28 | |
| TAIR|locus:2825047 | 465 | AT1G03495 [Arabidopsis thalian | 0.759 | 0.387 | 0.357 | 2.9e-25 | |
| UNIPROTKB|Q8W1W9 | 462 | 5MAT1 "Malonyl-coenzyme:anthoc | 0.810 | 0.415 | 0.347 | 1.8e-23 | |
| UNIPROTKB|Q8GSN8 | 460 | 3MAT "Malonyl-coenzyme A:antho | 0.805 | 0.415 | 0.346 | 3.1e-22 | |
| TAIR|locus:2177212 | 448 | AT5G39090 [Arabidopsis thalian | 0.763 | 0.404 | 0.329 | 1e-19 | |
| TAIR|locus:2093645 | 458 | AT3G29635 "AT3G29635" [Arabido | 0.763 | 0.395 | 0.314 | 2.3e-19 | |
| TAIR|locus:2159476 | 452 | AACT1 "anthocyanin 5-aromatic | 0.742 | 0.389 | 0.317 | 7.7e-18 | |
| TAIR|locus:2177172 | 469 | PMAT1 "phenolic glucoside malo | 0.772 | 0.390 | 0.309 | 3e-17 | |
| TAIR|locus:2091798 | 451 | PMAT2 "phenolic glucoside malo | 0.738 | 0.388 | 0.309 | 4.5e-17 | |
| TAIR|locus:2091808 | 451 | AT3G29680 [Arabidopsis thalian | 0.755 | 0.396 | 0.291 | 7.4e-17 |
| TAIR|locus:2024127 AT1G03940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 315 (115.9 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 70/191 (36%), Positives = 105/191 (54%)
Query: 8 ISTYVVTCAFMWVPWMKIQEAEEGTTGGQLDDDTLYHFMAPSDRRGRFEL--PFPLTYFG 65
+ST+VVT AF+WV +K + T + D D ++H M D R R + P P TYFG
Sbjct: 276 VSTFVVTLAFIWVSLIKTLVQDSETKANEEDKDEVFHLMINVDCRNRLKYTQPIPQTYFG 335
Query: 66 NCLARLSASAKRSELIGSNGIVVAAKAIGRAICKLENGPLTGAENSLSHFIEKLKMPSLL 125
NC+A S K+ +L+G ++ A+ AI I + + L + K M
Sbjct: 336 NCMAPGIVSVKKHDLLGEKCVLAASDAITARIKDMLSSDLLKTAPRWGQGVRKWVMSHYP 395
Query: 126 VTVAGSPKFRVYDTDFGWGKPKKSEVGHIGHG-SFSLNECRDEEGQGGVEIGFVIGRHQL 184
++AG+PK +YD DFG GKP K E+ HI G S + +E RD G GVEIG + + ++
Sbjct: 396 TSIAGAPKLGLYDMDFGLGKPCKMEIVHIETGGSIAFSESRD--GSNGVEIGIALEKKKM 453
Query: 185 DFFNAIIEQGL 195
D F++I++QG+
Sbjct: 454 DVFDSILQQGI 464
|
|
| TAIR|locus:2825047 AT1G03495 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8W1W9 5MAT1 "Malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase" [Salvia splendens (taxid:180675)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8GSN8 3MAT "Malonyl-coenzyme A:anthocyanin 3-O-glucoside-6''-O-malonyltransferase" [Dahlia pinnata (taxid:101596)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2177212 AT5G39090 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2093645 AT3G29635 "AT3G29635" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2159476 AACT1 "anthocyanin 5-aromatic acyltransferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2177172 PMAT1 "phenolic glucoside malonyltransferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091798 PMAT2 "phenolic glucoside malonyltransferase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091808 AT3G29680 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| eugene3.00191057 | hypothetical protein (466 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 237 | |||
| pfam02458 | 432 | pfam02458, Transferase, Transferase family | 4e-09 | |
| PLN02663 | 431 | PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate | 2e-05 | |
| PLN03157 | 447 | PLN03157, PLN03157, spermidine hydroxycinnamoyl tr | 3e-04 | |
| PLN02481 | 436 | PLN02481, PLN02481, Omega-hydroxypalmitate O-ferul | 4e-04 |
| >gnl|CDD|217048 pfam02458, Transferase, Transferase family | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 4e-09
Identities = 43/191 (22%), Positives = 65/191 (34%), Gaps = 25/191 (13%)
Query: 7 RISTYVVTCAFMW--VPWMKIQEAEEGTTGGQLDDDTLYHFMAPSDRRGRFELPFPLTYF 64
+ + V A +W + + EE T GQ + R R P P YF
Sbjct: 250 PRTRFEVVTALLWRCATKARKLDPEEETVLGQ-----------AVNIRSRLNPPLPPGYF 298
Query: 65 GNCLARLSASAKRSELIGSNGIVVAAKAIGRAICKLENGPLTGAENSLSHFIEKLKMPSL 124
GN + A + +EL SN + A+ + A K+ + + LK
Sbjct: 299 GNAYFSVVAKSTAAELE-SNPLGWIAELVKEAKKKVIDDEYLESVIDWVENSLPLKGFYE 357
Query: 125 ------LVTVAGSPKFRVYDTDFGWGKPK--KSEVGHIGHGSFSLNECRDEEGQGGVEIG 176
V+ +F Y+ DFGWGKP V G + GGVE+
Sbjct: 358 GTKDDPAFLVSSWCRFPFYEVDFGWGKPVYVGPVVPPFGDIVLLIP---SPGDDGGVEVA 414
Query: 177 FVIGRHQLDFF 187
+ + F
Sbjct: 415 VCLPEEAMSKF 425
|
This family includes a number of transferase enzymes. These include anthranilate N-hydroxycinnamoyl/benzoyltransferase that catalyzes the first committed reaction of phytoalexin biosynthesis. Deacetylvindoline 4-O-acetyltransferase EC:2.3.1.107 catalyzes the last step in vindoline biosynthesis is also a member of this family. The motif HXXXD is probably part of the active site. The family also includes trichothecene 3-O-acetyltransferase. Length = 432 |
| >gnl|CDD|166304 PLN02663, PLN02663, hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >gnl|CDD|178702 PLN03157, PLN03157, spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215266 PLN02481, PLN02481, Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 237 | |||
| PLN03157 | 447 | spermidine hydroxycinnamoyl transferase; Provision | 100.0 | |
| PLN02481 | 436 | Omega-hydroxypalmitate O-feruloyl transferase | 100.0 | |
| PLN02663 | 431 | hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinn | 100.0 | |
| PF02458 | 432 | Transferase: Transferase family; InterPro: IPR0034 | 100.0 | |
| PLN00140 | 444 | alcohol acetyltransferase family protein; Provisio | 100.0 | |
| PRK09294 | 416 | acyltransferase PapA5; Provisional | 97.81 | |
| PF07247 | 480 | AATase: Alcohol acetyltransferase; InterPro: IPR01 | 93.07 | |
| TIGR02946 | 446 | acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT. This b | 90.65 |
| >PLN03157 spermidine hydroxycinnamoyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-40 Score=306.88 Aligned_cols=178 Identities=21% Similarity=0.334 Sum_probs=158.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcccccccCCCCCCCCCcEEEEEEecCCCCCCCCCCcCCccccccccccccccccccccC
Q 047536 5 AARISTYVVTCAFMWVPWMKIQEAEEGTTGGQLDDDTLYHFMAPSDRRGRFELPFPLTYFGNCLARLSASAKRSELIGSN 84 (237)
Q Consensus 5 ~~~~St~dal~AliW~~~~rAr~~~~~~~~~~~~~~~~s~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~eL~~~~ 84 (237)
..++|++|+|+||+|+|++|||.. .+++.+.+.++||+|+|++||+|++||||++..+.+..+.+||.+ .
T Consensus 254 ~~~~St~dalsA~lWr~~~rAr~~---------~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~-~ 323 (447)
T PLN03157 254 GRPYTRYETVAGHVWRSACKARGH---------EPEQPTALGICVDSRSRMQPPLPDGYFGNATLDVIAESTSGELVS-K 323 (447)
T ss_pred CCCccHHHHHHHHHHHHHHHHccC---------CCCCceEEEEEecCCCCCCCCCCCCcccceeeeccchhhHHHHhh-C
Confidence 357999999999999999999986 567889999999999999999999999999999998888999988 8
Q ss_pred cHHHHHHHHHHHHHhccCchhhhHHhHHhhhhc--ccC------------CCCCeEEEecCCCCCcCccccCCCccceee
Q 047536 85 GIVVAAKAIGRAICKLENGPLTGAENSLSHFIE--KLK------------MPSLLVTVAGSPKFRVYDTDFGWGKPKKSE 150 (237)
Q Consensus 85 ~L~~vA~~IR~ai~~~t~e~i~~~~~~~~~~~~--~l~------------~~~~~~~vtsw~~~~~~~~DFG~GkP~~v~ 150 (237)
+|+++|..||+++.++++++++++++|++...+ .+. ....++.+|||+||++|++|||||+|.+++
T Consensus 324 ~l~~~a~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~~~~~y~~DFGwGkp~~~~ 403 (447)
T PLN03157 324 PLGYASSKIREAIEKVTNEYVQSAIDYLKNQEDLTRFQDLHALGGAEGPFYGNPNLGVVSWLTLPIYGLDFGWGKEIYMG 403 (447)
T ss_pred CHHHHHHHHHHHHHHhHHHHHHHHHHHHhhCccchhhhcccccccccccccCCCceEEeecccCCccccccCCCccceec
Confidence 999999999999999999999999999886542 110 124679999999999999999999999998
Q ss_pred ccccCc-cEEEEeecCCCCCCCcEEEEEecCHHHHHHHHHHHHHH
Q 047536 151 VGHIGH-GSFSLNECRDEEGQGGVEIGFVIGRHQLDFFNAIIEQG 194 (237)
Q Consensus 151 ~~~~~~-G~v~i~p~~~g~g~Gg~ev~v~L~~e~M~~l~~~~~~~ 194 (237)
+..... |.++++|+++++ ||+||.|+|++++|++|+++|++.
T Consensus 404 p~~~~~~g~~~l~~~~~~~--g~iev~v~L~~~~M~~f~~~~~~~ 446 (447)
T PLN03157 404 PGTHDFDGDSLLLPGQNED--GSVILALCLQVAHMEAFKKFFYED 446 (447)
T ss_pred ccccCCCceEEEeecCCCC--CcEEEEEEcCHHHHHHHHHHHHhh
Confidence 864444 999999998766 889999999999999999998875
|
|
| >PLN02481 Omega-hydroxypalmitate O-feruloyl transferase | Back alignment and domain information |
|---|
| >PLN02663 hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferase | Back alignment and domain information |
|---|
| >PF02458 Transferase: Transferase family; InterPro: IPR003480 This family includes a number of transferase enzymes | Back alignment and domain information |
|---|
| >PLN00140 alcohol acetyltransferase family protein; Provisional | Back alignment and domain information |
|---|
| >PRK09294 acyltransferase PapA5; Provisional | Back alignment and domain information |
|---|
| >PF07247 AATase: Alcohol acetyltransferase; InterPro: IPR010828 This family contains a number of alcohol acetyltransferase (2 | Back alignment and domain information |
|---|
| >TIGR02946 acyl_WS_DGAT acyltransferase, WS/DGAT/MGAT | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 237 | ||||
| 2e1t_A | 454 | Crystal Structure Of Dendranthema Morifolium Dmat C | 7e-29 | ||
| 2e1v_A | 454 | Crystal Structure Of Dendranthema Morifolium Dmat, | 3e-27 | ||
| 2xr7_A | 453 | Crystal Structure Of Nicotiana Tabacum Malonyltrans | 2e-19 |
| >pdb|2E1T|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat Complexed With Malonyl-coa Length = 454 | Back alignment and structure |
|
| >pdb|2E1V|A Chain A, Crystal Structure Of Dendranthema Morifolium Dmat, Seleno- Methionine Derivative Length = 454 | Back alignment and structure |
| >pdb|2XR7|A Chain A, Crystal Structure Of Nicotiana Tabacum Malonyltransferase (Ntmat1) Complexed With Malonyl-Coa Length = 453 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 237 | |||
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 5e-40 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 2e-36 | |
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 6e-33 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 1e-29 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 2e-18 |
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} Length = 453 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 5e-40
Identities = 61/200 (30%), Positives = 101/200 (50%), Gaps = 10/200 (5%)
Query: 1 SEPAAARISTYVVTCAFMWVPWMKIQEAEEGTTGGQLDDDTLYHFMAPSDRRGRFELPFP 60
P ++++ VTCA++W +K + TG ++D++ + F +D R +F P P
Sbjct: 260 RRPKLTHVTSFTVTCAYVWTCIIKSE----AATGEEIDENGMEFFGCAADCRAQFNPPLP 315
Query: 61 LTYFGNCLARLSASAKRSELIGSNGIVVAAKAIGRAICKLENGPLTGAENSLSHFIEKLK 120
+YFGN L A ++ +L G G +A + IG AI K S +K+
Sbjct: 316 PSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSGSWFKEYDKVD 375
Query: 121 MPSLLVTVAGSPKFRVYDTDFGWGKPKKSEVGHI---GHGSFSLNECRDEEGQGGVEIGF 177
L +VAGSPK +Y DFGWG+P+K E I S SL++ +D + G +EIG
Sbjct: 376 AKRSL-SVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSD--GDLEIGL 432
Query: 178 VIGRHQLDFFNAIIEQGLNI 197
+ + +++ F A+ G++
Sbjct: 433 SLSKTRMNAFAAMFTHGISF 452
|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A Length = 454 | Back alignment and structure |
|---|
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A Length = 439 | Back alignment and structure |
|---|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} Length = 421 | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* Length = 451 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 237 | |||
| 4g22_A | 439 | Hydroxycinnamoyl-COA shikimate/quinate hydroxycinn | 100.0 | |
| 2xr7_A | 453 | Malonyltransferase; xenobiotics, naphthols; HET: M | 100.0 | |
| 2e1v_A | 454 | Acyl transferase; BAHD superfamily, seleno-methion | 100.0 | |
| 2bgh_A | 421 | Vinorine synthase; VS, BAHD, acetyltransferase, au | 100.0 | |
| 2rkv_A | 451 | Trichothecene 3-O-acetyltransferase; BAHD superfam | 100.0 |
| >4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-41 Score=312.16 Aligned_cols=177 Identities=20% Similarity=0.329 Sum_probs=159.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcccccccCCCCCCCCCcEEEEEEecCCCCCCCCCCcCCccccccccccccccccccccC
Q 047536 5 AARISTYVVTCAFMWVPWMKIQEAEEGTTGGQLDDDTLYHFMAPSDRRGRFELPFPLTYFGNCLARLSASAKRSELIGSN 84 (237)
Q Consensus 5 ~~~~St~dal~AliW~~~~rAr~~~~~~~~~~~~~~~~s~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~eL~~~~ 84 (237)
..++|+||+|+||+|+|++|||.. ++++.+++.++||+|+|++||+|++||||++..+.+.++++||.+ +
T Consensus 254 ~~~~St~dal~A~iWr~~~rAr~~---------~~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~-~ 323 (439)
T 4g22_A 254 TISYSSYEMLAGHVWRCACKARGL---------EVDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEF-K 323 (439)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHTTC---------CTTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHH-S
T ss_pred CCCccHHHHHHHHHHHHHHHhcCC---------CCCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHHhh-C
Confidence 467999999999999999999987 567899999999999999999999999999999999999999997 8
Q ss_pred cHHHHHHHHHHHHHhccCchhhhHHhHHhhhhc--ccC-----CCCCeEEEecCCCCCcCccccCCCccceeeccccCc-
Q 047536 85 GIVVAAKAIGRAICKLENGPLTGAENSLSHFIE--KLK-----MPSLLVTVAGSPKFRVYDTDFGWGKPKKSEVGHIGH- 156 (237)
Q Consensus 85 ~L~~vA~~IR~ai~~~t~e~i~~~~~~~~~~~~--~l~-----~~~~~~~vtsw~~~~~~~~DFG~GkP~~v~~~~~~~- 156 (237)
+|+++|.+||+++.++|+++++++++|++...+ .+. ....++.+|||++|++|++|||||+|+++++.....
T Consensus 324 ~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~ 403 (439)
T 4g22_A 324 PVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYE 403 (439)
T ss_dssp CHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSSCCCSEEEESSCCST
T ss_pred cHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcCCcEEEeecCcCCccccccCCCCcceeeccccCCC
Confidence 999999999999999999999999999986532 111 135789999999999999999999999999865545
Q ss_pred cEEEEeecCCCCCCCcEEEEEecCHHHHHHHHHHHHH
Q 047536 157 GSFSLNECRDEEGQGGVEIGFVIGRHQLDFFNAIIEQ 193 (237)
Q Consensus 157 G~v~i~p~~~g~g~Gg~ev~v~L~~e~M~~l~~~~~~ 193 (237)
|.++++|+++++ ||++|.|+|++++|++|+++|++
T Consensus 404 g~~~~~p~~~~~--ggi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 404 GLSFILPSPTND--GSMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp TEEEEEECTTCS--SCEEEEEEEEHHHHHHHHHHHTC
T ss_pred cEEEEeecCCCC--CcEEEEEECCHHHHHHHHHHhcc
Confidence 999999998766 89999999999999999998853
|
| >2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum} | Back alignment and structure |
|---|
| >2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A | Back alignment and structure |
|---|
| >2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina} | Back alignment and structure |
|---|
| >2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 237 | |||
| d1q9ja2 | 238 | Polyketide synthase associated protein 5, PapA5 {M | 96.86 |
| >d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-dependent acyltransferases superfamily: CoA-dependent acyltransferases family: NRPS condensation domain (amide synthase) domain: Polyketide synthase associated protein 5, PapA5 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.86 E-value=0.018 Score=45.57 Aligned_cols=120 Identities=19% Similarity=0.103 Sum_probs=74.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhcccccccCCCCCCCCCcEEEEEEecCCCCCCCCCCcCCccccccccccccccccccccCc
Q 047536 6 ARISTYVVTCAFMWVPWMKIQEAEEGTTGGQLDDDTLYHFMAPSDRRGRFELPFPLTYFGNCLARLSASAKRSELIGSNG 85 (237)
Q Consensus 6 ~~~St~dal~AliW~~~~rAr~~~~~~~~~~~~~~~~s~l~~~vd~R~rl~p~lp~~Y~GN~v~~~~~~~~~~eL~~~~~ 85 (237)
..+|.+.++.|.+=..+.+-.. .++....+..+++.|+++.|+..++.+||.+.......++. .+.+
T Consensus 53 ~~~T~~~~l~aa~~~~l~~~~~----------~~~~~~~~~~~~~~r~~~~~~~~~~~~G~~~~~~~~r~~~~---~~~~ 119 (238)
T d1q9ja2 53 HRLSLNAVVAAAILLTEWQLRN----------TPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIG---PNTD 119 (238)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHT----------CSSCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCC---SSCC
T ss_pred cCCcHHHHHHHHHHHHHHHHhC----------CCCccccccccccccccccCccccceeEeeeeeEEEEEecC---CCCC
Confidence 4578888888866555554332 23456788999999999999988889999887776665433 3368
Q ss_pred HHHHHHHHHHHHHhc-cCch-hhhHHhHHhhhhcccCCCCCeEEEecCCCCCcCc
Q 047536 86 IVVAAKAIGRAICKL-ENGP-LTGAENSLSHFIEKLKMPSLLVTVAGSPKFRVYD 138 (237)
Q Consensus 86 L~~vA~~IR~ai~~~-t~e~-i~~~~~~~~~~~~~l~~~~~~~~vtsw~~~~~~~ 138 (237)
+.++++.+++.+... ..++ ....+.........-......+.+++....+...
T Consensus 120 ~~~l~~~v~~~l~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~g~~~~~~ 174 (238)
T d1q9ja2 120 IVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDATSFPTMR 174 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHSCCBGGGGGGCCCSSSCCCEEEECCCCCCSCC
T ss_pred HHHHHHHHHHHHHHHHhcccccHHHHhhhhhcccCCccCCceeeeeccccccccc
Confidence 899999998887542 1111 1111111111110111244668888887766544
|