Citrus Sinensis ID: 047597

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------
SLADGVTAEEARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYCKDSDSKQGSETSGVSADPQETNGSKFYGSWVHTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDTAPEDVSPTQKEPSQPTVVQSHSVVVVSDQGAHLIQSKPNSDHKNAQEVSPGRPESDPPKI
cccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHcHHHHHHHHcccHHHHHHHHHHHHHccccccccccEEEEEHHHHcHHHHHHHHHcccccccccccccccccccEEEccccccccccccccccccccHHHcHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccEEEEccccEEEcccEEEccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccEEEccccccccccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccEEEcccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEccEEEEEEEccccccccccccccccccccccccccccccccc
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEccccEEEcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccEEHHHHHHcHHHHHHHHHHHHHHHHHHcccccccccccccEEEccccccccccccEHHHcHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccccEEEccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccEcccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccEEEEccccccccccHHHHHHHHHHHHHHHHHccccccccccEEcccccEEEEcccccccccccccccHccccHccccccccccccccccccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccccHcccccccccccccccccEEEEEEEccccccccccccccccccccccccccccccccc
SLADGVTAEEARQLRDEVREMFYHAFDgymehafpldelrplscegedslgGYALTLVDSLDTLallgdrerfTTSVEWIGKnlqfdinkTVSVFETTIRVLGGLLSAHLIarssprllpafdtptgipfgsvnllhgvdeheskitstagggtlTLEFGVLsrltndpifeQVTKKAVLGIWARRSKLNLVGAHInvftgewtqkdagigtSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLfndpwyvevnMDSAAIVWPLFNslqafwpglqvlagdidpavrTHAAFFSVWkrygftpegfnlATLTiqqgqksyplrpelieSTYLLYKatrdpryldaGRDMVASlqygtrcpcgychisdvefhkkedhmeSFFLAETVKYLWLLFDLavgpdnlvengpykyifsteghllpatpqislkrehcsyfgayckdsdskqgsetsgvsadpqetngskfygswvhtgfpsdsflestsvpglikglcpglthgqkygitylplvdtapedvsptqkepsqptvvqshSVVVVSdqgahliqskpnsdhknaqevspgrpesdppki
sladgvtaeearqlRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWigknlqfdinktVSVFETTIRVLGGLLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKitstagggtLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFtgewtqkdaGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTiqqgqksyplrpELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYCKDSDSKQGSETSGVSADPQETNGSKFYGSWVHTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDTAPEDVSPTQKEPSQPTVVQSHSVVVVSDQGAHLiqskpnsdhknaqevspgrpesdppki
SLADGVTAEEARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYCKDSDSKQGSETSGVSADPQETNGSKFYGSWVHTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDTAPEDVSPTQKEPSQPTvvqshsvvvvsDQGAHLIQSKPNSDHKNAQEVSPGRPESDPPKI
*****************VREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYC*************************FYGSWVHTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVD*************************************************************
*************L*DEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCS********************************************************************YGITYLPLV**************************************************************
***********RQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYCKD****************QETNGSKFYGSWVHTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDTAP*******************SVVVVSDQGAHLIQSK***********************
*****VTAEEARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCS*F*A*********************************HTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDT**************PTVVQSHSVVVVSDQ*******************************
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SLADGVTAEEARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYCKDSDSKQGSETSGVSADPQETNGSKFYGSWVHTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDTAPEDVSPTQKEPSQPTVVQSHSVVVVSDQGAHLIQSKPNSDHKNAQEVSPGRPESDPPKI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query577 2.2.26 [Sep-21-2011]
Q9FG93624 Probable alpha-mannosidas yes no 0.942 0.871 0.727 0.0
Q9BV94578 ER degradation-enhancing yes no 0.714 0.712 0.457 1e-114
Q9SXC9574 Probable alpha-mannosidas no no 0.703 0.707 0.478 1e-112
Q92611657 ER degradation-enhancing no no 0.703 0.617 0.450 1e-100
Q925U4652 ER degradation-enhancing no no 0.714 0.631 0.444 1e-100
Q6GQB9 913 ER degradation-enhancing N/A no 0.707 0.446 0.425 1e-97
O94726 787 ER degradation-enhancing yes no 0.755 0.554 0.395 5e-96
Q9BZQ6 932 ER degradation-enhancing no no 0.717 0.444 0.427 3e-94
Q2HXL6 931 ER degradation-enhancing no no 0.712 0.441 0.419 4e-94
P38888 796 ER degradation-enhancing yes no 0.779 0.565 0.345 5e-75
>sp|Q9FG93|MNS4_ARATH Probable alpha-mannosidase I MNS4 OS=Arabidopsis thaliana GN=MNS4 PE=2 SV=1 Back     alignment and function desciption
 Score =  865 bits (2236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/587 (72%), Positives = 475/587 (80%), Gaps = 43/587 (7%)

Query: 2   LADGVTAEEARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSL 61
           LA+ V  +EA+QLRDEVR MFYHAFDGYM +AFPLDELRPLSC+GED+LGGYALTL+DSL
Sbjct: 28  LAESVKPDEAKQLRDEVRGMFYHAFDGYMNNAFPLDELRPLSCQGEDTLGGYALTLIDSL 87

Query: 62  DTLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARS------- 114
           DTLALLGDRERFT+SVEWIGKNLQF+INKTVSVFETTIRVLGGLLSAHLIA         
Sbjct: 88  DTLALLGDRERFTSSVEWIGKNLQFNINKTVSVFETTIRVLGGLLSAHLIASDYATGMRI 147

Query: 115 --------------SPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFG 160
                         + R+LPAFDTPTGIPFGSVNL++GVD+HESKITSTAGGGTL+LEFG
Sbjct: 148 PSYNNELLVLAENLARRMLPAFDTPTGIPFGSVNLMYGVDKHESKITSTAGGGTLSLEFG 207

Query: 161 VLSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEY 220
           VLSRLTNDP+FEQV K AV G+WARRS L+LVGAHINVFTGEWTQKDAGIGTSIDSFYEY
Sbjct: 208 VLSRLTNDPVFEQVAKNAVRGLWARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDSFYEY 267

Query: 221 LLKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQ 280
           LLKAY+LFGDEEYLYIFQE+Y++AM YL  DPWYVEVNMDSAAIVWP+FNSLQAFWPGLQ
Sbjct: 268 LLKAYILFGDEEYLYIFQEAYRSAMQYLHKDPWYVEVNMDSAAIVWPVFNSLQAFWPGLQ 327

Query: 281 VLAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKA 340
           VLAGD+DPA+RTH AFFSVWKRYGFTPEGFNLATL++Q GQKSYPLRPELIESTY LYKA
Sbjct: 328 VLAGDVDPAIRTHTAFFSVWKRYGFTPEGFNLATLSVQYGQKSYPLRPELIESTYWLYKA 387

Query: 341 TRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDL 400
           TRDPRYLDAGRD VASLQYG +CPCGYCHI+DVE HK+EDHMESFFLAETVKYLWLLFDL
Sbjct: 388 TRDPRYLDAGRDFVASLQYGAKCPCGYCHITDVELHKQEDHMESFFLAETVKYLWLLFDL 447

Query: 401 AVGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYCKDSDSKQGSETSGVSA 460
           AV  DNLV+NGPYKYIFSTEGHLLP TPQISL REHCSYFG YC  + +K   E  G  +
Sbjct: 448 AVDSDNLVDNGPYKYIFSTEGHLLPITPQISLAREHCSYFGGYCPSNSTKLEQEVLGEDS 507

Query: 461 DPQETNGSKFYGSWVHTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDTAPE 520
              + +    Y    H  FP         V GLIKGLCPGLTH QKYG +Y+    T  E
Sbjct: 508 SNDDHSNDYPY----HESFP---------VTGLIKGLCPGLTHAQKYGFSYVLPEKTDRE 554

Query: 521 DVSPTQKEPSQPTVVQSHSVVVVSDQGAHLIQSKPNSDHKNAQEVSP 567
           DV+  Q +P    VV S S+V++SDQ    ++ +P  +     +  P
Sbjct: 555 DVN--QPKP----VVTSSSIVLISDQ---TVEKRPQEEEGFTSQSEP 592
Involved in N-glycan processing.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|Q9BV94|EDEM2_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 2 OS=Homo sapiens GN=EDEM2 PE=1 SV=2 Back     alignment and function description
>sp|Q9SXC9|MNS5_ARATH Probable alpha-mannosidase I MNS5 OS=Arabidopsis thaliana GN=MNS5 PE=2 SV=1 Back     alignment and function description
>sp|Q92611|EDEM1_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Homo sapiens GN=EDEM1 PE=1 SV=1 Back     alignment and function description
>sp|Q925U4|EDEM1_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Mus musculus GN=Edem1 PE=2 SV=1 Back     alignment and function description
>sp|Q6GQB9|EDEM3_XENLA ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Xenopus laevis GN=edem3 PE=2 SV=2 Back     alignment and function description
>sp|O94726|MNL1_SCHPO ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mnl1 PE=3 SV=2 Back     alignment and function description
>sp|Q9BZQ6|EDEM3_HUMAN ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Homo sapiens GN=EDEM3 PE=1 SV=2 Back     alignment and function description
>sp|Q2HXL6|EDEM3_MOUSE ER degradation-enhancing alpha-mannosidase-like protein 3 OS=Mus musculus GN=Edem3 PE=1 SV=2 Back     alignment and function description
>sp|P38888|MNL1_YEAST ER degradation-enhancing alpha-mannosidase-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MNL1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query577
224099877565 predicted protein [Populus trichocarpa] 0.939 0.959 0.816 0.0
255551963655 Mannosyl-oligosaccharide 1,2-alpha-manno 0.982 0.865 0.775 0.0
225432886649 PREDICTED: probable alpha-mannosidase I 0.996 0.885 0.753 0.0
356535347619 PREDICTED: probable alpha-mannosidase I 0.975 0.909 0.755 0.0
297737153643 unnamed protein product [Vitis vinifera] 0.918 0.824 0.759 0.0
449433283615 PREDICTED: probable alpha-mannosidase I 0.980 0.920 0.747 0.0
15239952624 putative alpha-mannosidase I MNS4 [Arabi 0.942 0.871 0.727 0.0
297791519624 glycoside hydrolase family 47 protein [A 0.944 0.873 0.721 0.0
357136681674 PREDICTED: probable alpha-mannosidase I 0.951 0.814 0.707 0.0
53793362676 putative aspartyl(D) tRNA Synthetase (89 0.913 0.779 0.732 0.0
>gi|224099877|ref|XP_002311656.1| predicted protein [Populus trichocarpa] gi|222851476|gb|EEE89023.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  948 bits (2451), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 464/568 (81%), Positives = 490/568 (86%), Gaps = 26/568 (4%)

Query: 3   ADGVTAEEARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLD 62
           ADGVT EEA  LRDEVREMFYHAF+GYMEHAFPLDEL+PLSCEGEDSLGGYALTL+DSLD
Sbjct: 1   ADGVTPEEATLLRDEVREMFYHAFNGYMEHAFPLDELKPLSCEGEDSLGGYALTLIDSLD 60

Query: 63  TLALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARS-------- 114
            LALLGDRERFT+SV+WIGKNL+FDINKTVSVFETTIRVLGGLLSAHLIA          
Sbjct: 61  MLALLGDRERFTSSVDWIGKNLRFDINKTVSVFETTIRVLGGLLSAHLIASDYATGMRIP 120

Query: 115 -------------SPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGV 161
                        + R+LPAFDTPTGIPFGSVNLL+GVDE ES+ITSTAGGGTLTLEFG+
Sbjct: 121 SYDNQLLDLAEDLARRMLPAFDTPTGIPFGSVNLLYGVDEQESRITSTAGGGTLTLEFGM 180

Query: 162 LSRLTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYL 221
           LSRLTNDPIFEQVTK AV G+WARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYL
Sbjct: 181 LSRLTNDPIFEQVTKNAVRGLWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYL 240

Query: 222 LKAYLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQV 281
           LKAYLLFGDEEYL+IFQE+Y AAMHYL+NDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQV
Sbjct: 241 LKAYLLFGDEEYLFIFQEAYAAAMHYLYNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQV 300

Query: 282 LAGDIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKAT 341
           LAGDIDPA+RTHAAFFSVWKRYGFTPEGFNLATLT+Q GQKSYPLRPELIESTY LYKAT
Sbjct: 301 LAGDIDPAIRTHAAFFSVWKRYGFTPEGFNLATLTVQHGQKSYPLRPELIESTYWLYKAT 360

Query: 342 RDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLA 401
           RDPRYLD GRDMV SLQYG RCPCGYCHI DVEFHKKEDHMESFFLAETVKYLWLLFDLA
Sbjct: 361 RDPRYLDVGRDMVVSLQYGARCPCGYCHIVDVEFHKKEDHMESFFLAETVKYLWLLFDLA 420

Query: 402 VGPDNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYCKDSDSKQGSETSGVSAD 461
            GPDNLVENGPYKYIFSTEGHLLPATPQISL  EHCSY GAYCK    +Q S  S +S  
Sbjct: 421 SGPDNLVENGPYKYIFSTEGHLLPATPQISLIHEHCSYLGAYCKGGGIEQESRKSDISIH 480

Query: 462 PQETNGSKFYGSWVHTGFPSD-SFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDTAPE 520
           PQE N S   GSWVH+ +PSD SFLESTS  GL+KGLCPGLTHGQKYGI+YL    TA E
Sbjct: 481 PQENNASVLSGSWVHSSYPSDSSFLESTSTSGLMKGLCPGLTHGQKYGISYLDATRTAQE 540

Query: 521 DVSPTQKEPSQPTVVQSHSVVVVSDQGA 548
           D S  Q+E     V  SHS++VVS Q A
Sbjct: 541 DHSTHQRE----NVADSHSLLVVSQQSA 564

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255551963|ref|XP_002517026.1| Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] gi|223543661|gb|EEF45189.1| Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225432886|ref|XP_002280131.1| PREDICTED: probable alpha-mannosidase I MNS4-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535347|ref|XP_003536208.1| PREDICTED: probable alpha-mannosidase I MNS4-like [Glycine max] Back     alignment and taxonomy information
>gi|297737153|emb|CBI26354.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449433283|ref|XP_004134427.1| PREDICTED: probable alpha-mannosidase I MNS4-like [Cucumis sativus] gi|449514841|ref|XP_004164495.1| PREDICTED: probable alpha-mannosidase I MNS4-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|15239952|ref|NP_199184.1| putative alpha-mannosidase I MNS4 [Arabidopsis thaliana] gi|75262426|sp|Q9FG93.1|MNS4_ARATH RecName: Full=Probable alpha-mannosidase I MNS4 gi|13877731|gb|AAK43943.1|AF370128_1 unknown protein [Arabidopsis thaliana] gi|10177939|dbj|BAB11298.1| unnamed protein product [Arabidopsis thaliana] gi|14532840|gb|AAK64102.1| unknown protein [Arabidopsis thaliana] gi|332007616|gb|AED94999.1| putative alpha-mannosidase I MNS4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297791519|ref|XP_002863644.1| glycoside hydrolase family 47 protein [Arabidopsis lyrata subsp. lyrata] gi|297309479|gb|EFH39903.1| glycoside hydrolase family 47 protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|357136681|ref|XP_003569932.1| PREDICTED: probable alpha-mannosidase I MNS4-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|53793362|dbj|BAD52943.1| putative aspartyl(D) tRNA Synthetase (89.0 kD)(drs-2C) [Oryza sativa Japonica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query577
TAIR|locus:2170872624 AT5G43710 "AT5G43710" [Arabido 0.705 0.652 0.767 1.3e-226
DICTYBASE|DDB_G0277051632 DDB_G0277051 "glycoside hydrol 0.535 0.488 0.507 1.1e-116
UNIPROTKB|A7MBJ3578 EDEM2 "EDEM2 protein" [Bos tau 0.601 0.600 0.44 9.1e-109
UNIPROTKB|E2R6R2577 EDEM2 "Uncharacterized protein 0.601 0.601 0.437 8.1e-108
UNIPROTKB|F1S4X4581 EDEM2 "Uncharacterized protein 0.549 0.545 0.460 1.5e-106
UNIPROTKB|F1NAE0575 EDEM2 "Uncharacterized protein 0.616 0.619 0.436 3.1e-106
ZFIN|ZDB-GENE-060519-1599 edem2 "ER degradation enhancer 0.497 0.479 0.484 9.5e-103
MGI|MGI:2180139652 Edem1 "ER degradation enhancer 0.538 0.476 0.471 1.1e-95
RGD|1563633650 Edem1 "ER degradation enhancer 0.538 0.478 0.471 1.1e-95
FB|FBgn0032480 801 Edem2 "Edem2" [Drosophila mela 0.523 0.377 0.461 1.4e-95
TAIR|locus:2170872 AT5G43710 "AT5G43710" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1705 (605.2 bits), Expect = 1.3e-226, Sum P(2) = 1.3e-226
 Identities = 326/425 (76%), Positives = 356/425 (83%)

Query:   105 LLSAHLIARSSPRLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSR 164
             L+ A  +AR   R+LPAFDTPTGIPFGSVNL++GVD+HESKITSTAGGGTL+LEFGVLSR
Sbjct:   155 LVLAENLAR---RMLPAFDTPTGIPFGSVNLMYGVDKHESKITSTAGGGTLSLEFGVLSR 211

Query:   165 LTNDPIFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKA 224
             LTNDP+FEQV K AV G+WARRS L+LVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKA
Sbjct:   212 LTNDPVFEQVAKNAVRGLWARRSNLDLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKA 271

Query:   225 YLLFGDEEYLYIFQESYQAAMHYLFNDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAG 284
             Y+LFGDEEYLYIFQE+Y++AM YL  DPWYVEVNMDSAAIVWP+FNSLQAFWPGLQVLAG
Sbjct:   272 YILFGDEEYLYIFQEAYRSAMQYLHKDPWYVEVNMDSAAIVWPVFNSLQAFWPGLQVLAG 331

Query:   285 DIDPAVRTHAAFFSVWKRYGFTPEGFNLATLTIQQGQKSYPLRPELIESTYLLYKATRDP 344
             D+DPA+RTH AFFSVWKRYGFTPEGFNLATL++Q GQKSYPLRPELIESTY LYKATRDP
Sbjct:   332 DVDPAIRTHTAFFSVWKRYGFTPEGFNLATLSVQYGQKSYPLRPELIESTYWLYKATRDP 391

Query:   345 RYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKKEDHMESFFLAETVKYLWLLFDLAVGP 404
             RYLDAGRD VASLQYG +CPCGYCHI+DVE HK+EDHMESFFLAETVKYLWLLFDLAV  
Sbjct:   392 RYLDAGRDFVASLQYGAKCPCGYCHITDVELHKQEDHMESFFLAETVKYLWLLFDLAVDS 451

Query:   405 DNLVENGPYKYIFSTEGHLLPATPQISLKREHCSYFGAYCKDSDSKQGSETSGVSADPQE 464
             DNLV+NGPYKYIFSTEGHLLP TPQISL REHCSYFG YC  + +K   E  G   D   
Sbjct:   452 DNLVDNGPYKYIFSTEGHLLPITPQISLAREHCSYFGGYCPSNSTKLEQEVLG--EDSSN 509

Query:   465 TNGSKFYGSWVHTGFPSDSFLESTSVPGLIKGLCPGLTHGQKYGITYLPLVDTAPEDVSP 524
              + S  Y    H  FP         V GLIKGLCPGLTH QKYG +Y+    T  EDV+ 
Sbjct:   510 DDHSNDYP--YHESFP---------VTGLIKGLCPGLTHAQKYGFSYVLPEKTDREDVN- 557

Query:   525 TQKEP 529
              Q +P
Sbjct:   558 -QPKP 561
GO:0004559 "alpha-mannosidase activity" evidence=ISS
GO:0004571 "mannosyl-oligosaccharide 1,2-alpha-mannosidase activity" evidence=IEA
GO:0005509 "calcium ion binding" evidence=IEA
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0006487 "protein N-linked glycosylation" evidence=ISS
GO:0016020 "membrane" evidence=IEA
DICTYBASE|DDB_G0277051 DDB_G0277051 "glycoside hydrolase family 47 protein" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|A7MBJ3 EDEM2 "EDEM2 protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2R6R2 EDEM2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|F1S4X4 EDEM2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|F1NAE0 EDEM2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-060519-1 edem2 "ER degradation enhancer, mannosidase alpha-like 2" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
MGI|MGI:2180139 Edem1 "ER degradation enhancer, mannosidase alpha-like 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1563633 Edem1 "ER degradation enhancer, mannosidase alpha-like 1" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
FB|FBgn0032480 Edem2 "Edem2" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FG93MNS4_ARATH3, ., 2, ., 1, ., -0.72740.94280.8717yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
pfam01532445 pfam01532, Glyco_hydro_47, Glycosyl hydrolase fami 1e-167
PTZ00470522 PTZ00470, PTZ00470, glycoside hydrolase family 47 5e-78
>gnl|CDD|216556 pfam01532, Glyco_hydro_47, Glycosyl hydrolase family 47 Back     alignment and domain information 
 Score =  482 bits (1244), Expect = e-167
 Identities = 178/450 (39%), Positives = 245/450 (54%), Gaps = 51/450 (11%)

Query: 21  MFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWI 80
            F HA+DGY ++A+  DELRP+SC G DS GG+  TLVDSLDTL ++G  + F  +V+W+
Sbjct: 1   AFLHAWDGYKKYAWGHDELRPISCRGRDSFGGWGATLVDSLDTLYIMGLTDEFEEAVDWV 60

Query: 81  GKNLQFDINKT-VSVFETTIRVLGGLLSAHLIARSSP----------RLLPAFDTPTGIP 129
            K L FD + T VSVFETTIR LGGLLSA+ ++              RLLPAFDTPTGIP
Sbjct: 61  EKKLDFDKDSTDVSVFETTIRYLGGLLSAYDLSGDDLLLEKAVDLADRLLPAFDTPTGIP 120

Query: 130 FGSVNLLH-GVDEHESKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWA--RR 186
           +  VNL   GV+      +S A  GTL LEF  LS+LT DP +E   ++ +  +W    R
Sbjct: 121 YPRVNLGKGGVNPVAGGASSLAEAGTLQLEFTRLSQLTGDPKYEDAAERVMDALWKSQSR 180

Query: 187 SKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFG--DEEYLYIFQESYQAA 244
           S   LV   I+  TG++T  D  +G   DS+YEYLLK Y+L G  D +YL ++ E+  A 
Sbjct: 181 SLPGLVPIFIDPSTGQFTGGDITLGAGGDSYYEYLLKQYILLGGKDPQYLDMYDEAMDAI 240

Query: 245 MHYLFNDPW------YV-EVNMDSAAIVWPLFNSLQAFWPGLQVLA--------GDIDPA 289
             +L   P       +V E++      + P  + L  F  GL  L         GD++ A
Sbjct: 241 KKHLLFRPSTPSDLLFVGELSSGGGGELSPKMDHLVCFAGGLLALGAKLGLPDKGDLELA 300

Query: 290 VRTHAAFFSVWKRY--GFTPEGFNLATLT----------IQQGQKSYPLRPELIESTYLL 337
                  + ++K    G  PE F                ++     Y LRPE IES + L
Sbjct: 301 EELTDTCYKMYKSTPTGLGPEIFYFNPCPCWDEDKWDFYVKIADSHYLLRPETIESLFYL 360

Query: 338 YKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDV--EFHKKEDHMESFFLAETVKYLW 395
           Y+ T DP+Y + G ++  +++  TR PCGY  I DV     +  D MESF+LAET+KYL+
Sbjct: 361 YRLTGDPKYREWGWEIFQAIEKYTRTPCGYAGIKDVTTPPPEPRDRMESFWLAETLKYLY 420

Query: 396 LLFDLAVGPDNLVENGPYKYIFSTEGHLLP 425
           LLF      D+L+     +++F+TE H LP
Sbjct: 421 LLFS----DDDLLSLD--EWVFNTEAHPLP 444

Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). Length = 445
>gnl|CDD|240427 PTZ00470, PTZ00470, glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 577
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 100.0
KOG2429622 consensus Glycosyl hydrolase, family 47 [Carbohydr 100.0
KOG2431546 consensus 1, 2-alpha-mannosidase [Carbohydrate tra 100.0
PF01532452 Glyco_hydro_47: Glycosyl hydrolase family 47; Inte 100.0
KOG2204625 consensus Mannosyl-oligosaccharide alpha-1,2-manno 100.0
KOG2430587 consensus Glycosyl hydrolase, family 47 [Carbohydr 100.0
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.66
KOG2204625 consensus Mannosyl-oligosaccharide alpha-1,2-manno 96.64
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 96.46
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 96.27
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 95.64
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 92.9
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 89.67
COG1331667 Highly conserved protein containing a thioredoxin 87.79
cd04791321 LanC_SerThrkinase Lanthionine synthetase C-like do 85.47
PF07470336 Glyco_hydro_88: Glycosyl Hydrolase Family 88; Inte 83.59
COG1331667 Highly conserved protein containing a thioredoxin 83.1
PTZ00470522 glycoside hydrolase family 47 protein; Provisional 82.86
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7e-132  Score=1084.35  Aligned_cols=413  Identities=33%  Similarity=0.547  Sum_probs=372.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCCCcceEEEeccchhhhcCChHHHHHHHHHHhhhccc--c
Q 047597           10 EARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQF--D   87 (577)
Q Consensus        10 ~~~~~r~~VK~aF~hAW~~Y~~~Awg~DEl~PlS~~~~d~~gg~g~TLVDSLDTL~IMGl~eEf~~A~~~V~~~l~F--~   87 (577)
                      ...+||++||+||+|||++|++||||||||+|+||+++|+ +|||+||||||||||||||++||++|++||.++++|  +
T Consensus        68 ~~~~r~~~Vk~~F~haW~~Y~~~Awg~DEL~P~S~~~~~~-~g~g~TlVDSLDTL~IMgl~~Ef~~a~~~V~~~l~f~~~  146 (522)
T PTZ00470         68 LNIKRRESVREAMKHAWEGYKEYAWGHDELRPLTKRHHEW-FGLGLTIIDSLDTLKIMGLKKEYKEGRDWVANNLKQSKD  146 (522)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHhCcCccceecCcCCccCC-CcchhHHHHHHHHHHHcCChHHHHHHHHHHHhhCCCCCC
Confidence            3457889999999999999999999999999999999885 579999999999999999999999999999988999  6


Q ss_pred             ccccccceeehhhhcccchhhhhhcCc----------cCcccccccCCCCCCCCCcCCCCCCCCCC---Ccceecccccc
Q 047597           88 INKTVSVFETTIRVLGGLLSAHLIARS----------SPRLLPAFDTPTGIPFGSVNLLHGVDEHE---SKITSTAGGGT  154 (577)
Q Consensus        88 ~~~~VsvFETtIR~LGGLLSAY~LsgD----------ad~LlpAFdTpsGiP~~~vnl~~g~~~~~---~~~t~lAe~GS  154 (577)
                      .+..|||||||||+||||||||+||+|          ||+|+||||||||||++.||+++|....+   ...+++||+||
T Consensus       147 ~~~~vsvFEttIR~LGGLLSAy~Ls~d~~lL~kA~dLgd~Ll~AFdTptgiP~~~vnl~~g~~~~~~~~~~~~~lAe~gS  226 (522)
T PTZ00470        147 TGLGVSVFETTIRVLGGLLSAYDLTGDEMYLEKAREIADRLLPAFNEDTGFPASEINLATGRKSYPGWAGGCSILSEVGT  226 (522)
T ss_pred             CCCeeeeeeeehhhHhHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccCCCCCcccCCCccchhhhhh
Confidence            678999999999999999999999998          99999999999999999999999876543   35678999999


Q ss_pred             chhchhhHHHhhCCchhHHHHHHHHHHHHhhhcc-CCeeeeeeeccCCceecccccccCCCchHHHhHHHHHhhcC--ch
Q 047597          155 LTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSK-LNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFG--DE  231 (577)
Q Consensus       155 l~LEF~~LS~lTGd~kY~~~a~~~~~~L~~~~~~-~GL~p~~i~~~tG~~~~~~~~lGa~~DSyYEYLLK~~lL~g--d~  231 (577)
                      ++|||++||++|||++|+++|+++++.||+.++. .||+|+.||+.+|+|++..++|||++|||||||||+|+|+|  ++
T Consensus       227 l~LEF~~LS~lTGd~kY~~~a~~i~~~l~~~~~~~~GL~p~~i~~~~g~~~~~~~siGa~~DS~YEYLlK~~il~~~~d~  306 (522)
T PTZ00470        227 LQLEFNYLSEITGDPKYAEYVDKVMDALFSMKPAINGLYPIFLNPDAGRFCGNHISLGALGDSYYEYLLKQWLYTNGREE  306 (522)
T ss_pred             HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCCCCCCccceEECCccCccCCCceeecCCcchhHHHHHHHHHhcCCCcH
Confidence            9999999999999999999999999999998877 79999999999999999999999999999999999999997  56


Q ss_pred             HHHHHHHHHHHHHHhhcccCC--cceEeccCCCccccccccccccccccchhhcCCC-------------ChHHHHHHHH
Q 047597          232 EYLYIFQESYQAAMHYLFNDP--WYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDI-------------DPAVRTHAAF  296 (577)
Q Consensus       232 ~~~~~y~~a~~ai~~~L~~~p--~~~~~~~~sg~~~~~~~dhL~CF~pGmlaLgg~~-------------~~a~~~~~~~  296 (577)
                      +|++||.+|+++|++||+.++  .+..+....|....++|+||+||+|||++|||..             +.|.+....|
T Consensus       307 ~~~~~~~~a~~~i~~~l~~~s~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~~~~~~~a~~l~~tC  386 (522)
T PTZ00470        307 RYRRLFVESAKGIIEHLYKRSPKGLTYIAEMDGGSLTNKMEHLACFAGGMFALGAAINITPDDEKSARYMEVGEEVTKTC  386 (522)
T ss_pred             HHHHHHHHHHHHHHHHhcccCCCCcEEEeeccCCcCcchhhhhhhhccchhhhcccccccccccccHHHHHHHHHHHHHH
Confidence            799999999999999998642  3333444556677899999999999999999942             1245556677


Q ss_pred             HHHHh--hhCCCCCccccCcc----ccccCCCccCCchhHHHHHHHHHHHcCChhHHHHHHHHHHHHhHhcccCCccccc
Q 047597          297 FSVWK--RYGFTPEGFNLATL----TIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHI  370 (577)
Q Consensus       297 ~~~~~--~~Gl~PE~f~~~~~----~~~~~~~~Y~LRPE~IESlfyLyR~TGD~kYrd~gW~if~aie~~~rt~~Gya~i  370 (577)
                      +..|.  ++|++||+|.|..+    .+...+++|+||||+|||+|||||+|||++||||||+||++|+++|||+|||++|
T Consensus       387 ~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~d~~Y~LRPE~iES~fylyR~TgD~~yre~gW~~f~ai~k~~rt~~Gya~i  466 (522)
T PTZ00470        387 YETYATSPTGLGPEIFHFDPNSGDISPNVHDSHYILRPETVESIFILYRLTGDPKYREWAWKIFQAIEKHCKTENGYSGL  466 (522)
T ss_pred             HHHHHhcccCCCCceEEeccCccccccccCCCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            76664  68999999998753    2345689999999999999999999999999999999999999999999999999


Q ss_pred             ccccc--CCCCCCcchHHHHHHHHHHHhHhccCCCCCCcccCCCCcEEecCCCccCCCCCC
Q 047597          371 SDVEF--HKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLPATPQ  429 (577)
Q Consensus       371 ~dV~~--~~~~D~mESFflAETLKYLYLLFsd~~~~d~~~~~~ld~~VFNTEaHPl~i~~~  429 (577)
                      +||+.  +.++|+|||||||||||||||||+|    +++++  +|+||||||||||||.+.
T Consensus       467 ~dV~~~~~~~~D~MeSFflaETLKYlYLlFsd----~~~i~--ld~~VFnTEAHPl~i~~~  521 (522)
T PTZ00470        467 KNVLTVHPQQDDFQESFFLAETLKYLYLLFQP----DHVIP--LDKYVFNTEAHPIPIQKT  521 (522)
T ss_pred             cccCCCCCCcCCcccchhHHHHHHHHHheecC----ccccc--cCCeEECCCCceeecCCC
Confidence            99997  5789999999999999999999995    34665  689999999999999764

>KOG2429 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2431 consensus 1, 2-alpha-mannosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3 Back     alignment and domain information
>KOG2204 consensus Mannosyl-oligosaccharide alpha-1,2-mannosidase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2430 consensus Glycosyl hydrolase, family 47 [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2204 consensus Mannosyl-oligosaccharide alpha-1,2-mannosidase and related glycosyl hydrolases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases Back     alignment and domain information
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [] Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PTZ00470 glycoside hydrolase family 47 protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
1nxc_A478 Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia R 5e-51
4ayo_A447 Structure Of The Gh47 Processing Alpha-1,2-mannosid 1e-47
1x9d_A538 Crystal Structure Of Human Class I Alpha-1,2-Mannos 2e-47
1fmi_A458 Crystal Structure Of Human Class I Alpha1,2-Mannosi 5e-47
1fo2_A460 Crystal Structure Of Human Class I Alpha1,2-Mannosi 5e-47
1dl2_A511 Crystal Structure Of Class I Alpha-1,2-Mannosidase 1e-33
1g6i_A545 Crystal Structure Of The Yeast Alpha-1,2-Mannosidas 5e-33
2ri8_A475 Penicillium Citrinum Alpha-1,2-Mannosidase Complex 6e-33
1kkt_A511 Structure Of P. Citrinum Alpha 1,2-Mannosidase Reve 8e-33
1hcu_A503 Alpha-1,2-Mannosidase From Trichoderma Reesei Lengt 2e-31
>pdb|1NXC|A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) Length = 478 Back     alignment and structure 
Iteration: 1

 Score =  199 bits (505), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 150/460 (32%), Positives = 233/460 (50%), Gaps = 59/460 (12%)
Query: 12  RQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDS--LGGY-ALTLVDSLDTLALLG 68
           R+ R +++EM  HA++ Y  +A+ L+EL+P+S EG  S   G     T+VD+LDTL ++G
Sbjct: 18  REKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDTLFIMG 77
Query: 69  DRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIA----------RSSPRL 118
            +  F  +  WI K L F++N  VSVFE  IR +GGLLSA+ ++              +L
Sbjct: 78  MKTEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKL 137
Query: 119 LPAFDTPTGIPFGSVNLLHGVDEH----ESKITSTAGGGTLTLEFGVLSRLTNDPIFEQV 174
           LPAF TP+GIP+  +N+  G+  +        +  A  GTL LEF  LS L+ DP+F + 
Sbjct: 138 LPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDPVFAE- 196
Query: 175 TKKAVLGIWARRSKLN----LVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFG- 229
               V+ I    +KL+    L   ++N  +G+W Q    +G   DSFYEYLLKA+L+   
Sbjct: 197 ---KVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDK 253
Query: 230 -DEEYLYIFQESYQAAMHYLFNDP--WYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDI 286
            D E   ++ ++ QA   +L          +      ++      L  F  G+  L  D 
Sbjct: 254 TDLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADG 313
Query: 287 DPAVRT--------------HAAFFSVWKRYGFTPEGFN----LATLTIQQGQKSYPLRP 328
            P  R               H ++   + + G  PE F     +  +  +Q +K Y LRP
Sbjct: 314 APEARAQHYLELGAEIARTCHESYNRTYVKLG--PEAFRFDGGVEAIATRQNEKYYILRP 371
Query: 329 ELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHKK--EDHMESFF 386
           E+IE+   +++ T DP+Y     + V +L+   R   GY  + DV   ++  +D  +SFF
Sbjct: 372 EVIETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNGGYSGLRDVYIARESYDDVQQSFF 431
Query: 387 LAETVKYLWLLFDLAVGPDNLVENGPYK-YIFSTEGHLLP 425
           LAET+KYL+L+F      D+L+   P + +IF+TE H  P
Sbjct: 432 LAETLKYLYLIFS----DDDLL---PLEHWIFNTEAHPFP 464
>pdb|4AYO|A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 Length = 447 Back     alignment and structure
>pdb|1X9D|A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue Length = 538 Back     alignment and structure
>pdb|1FMI|A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase Length = 458 Back     alignment and structure
>pdb|1FO2|A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin Length = 460 Back     alignment and structure
>pdb|1DL2|A Chain A, Crystal Structure Of Class I Alpha-1,2-Mannosidase From Saccharomyces Cerevisiae At 1.54 Angstrom Resolution Length = 511 Back     alignment and structure
>pdb|1G6I|A Chain A, Crystal Structure Of The Yeast Alpha-1,2-Mannosidase With Bound 1- Deoxymannojirimycin At 1.59 A Resolution Length = 545 Back     alignment and structure
>pdb|2RI8|A Chain A, Penicillium Citrinum Alpha-1,2-Mannosidase Complex With Glycerol Length = 475 Back     alignment and structure
>pdb|1KKT|A Chain A, Structure Of P. Citrinum Alpha 1,2-Mannosidase Reveals The Basis For Differences In Specificity Of The Er And Golgi Class I Enzymes Length = 511 Back     alignment and structure
>pdb|1HCU|A Chain A, Alpha-1,2-Mannosidase From Trichoderma Reesei Length = 503 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 1e-153
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 1e-152
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 1e-145
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 1e-139
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 1e-138
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-07
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Length = 478 Back     alignment and structure
 Score =  448 bits (1154), Expect = e-153
 Identities = 143/458 (31%), Positives = 224/458 (48%), Gaps = 45/458 (9%)

Query: 7   TAEEARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSL---GGYALTLVDSLDT 63
                R+ R +++EM  HA++ Y  +A+ L+EL+P+S EG  S         T+VD+LDT
Sbjct: 13  ADATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLFGNIKGATIVDALDT 72

Query: 64  LALLGDRERFTTSVEWIGKNLQFDINKTVSVFETTIRVLGGLLSAHLIARSSP------- 116
           L ++G +  F  +  WI K L F++N  VSVFE  IR +GGLLSA+ ++           
Sbjct: 73  LFIMGMKTEFQEAKSWIKKYLDFNVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVE 132

Query: 117 ---RLLPAFDTPTGIPFGSVNLLHGVDEH----ESKITSTAGGGTLTLEFGVLSRLTNDP 169
              +LLPAF TP+GIP+  +N+  G+  +        +  A  GTL LEF  LS L+ DP
Sbjct: 133 LGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHLSGDP 192

Query: 170 IFEQVTKKAVLGIWARRSKLNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFG 229
           +F +   K    +        L   ++N  +G+W Q    +G   DSFYEYLLKA+L+  
Sbjct: 193 VFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSD 252

Query: 230 --DEEYLYIFQESYQAAMHYLF--NDPWYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGD 285
             D E   ++ ++ QA   +L   +      +      ++      L  F  G+  L  D
Sbjct: 253 KTDLEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGAD 312

Query: 286 IDPAVRT--------------HAAFFSVWKRYGFTPEGFN--LATLTIQQGQKSYPLRPE 329
             P  R               H ++   + + G     F+  +  +  +Q +K Y LRPE
Sbjct: 313 GAPEARAQHYLELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPE 372

Query: 330 LIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHISDVEFHK--KEDHMESFFL 387
           +IE+   +++ T DP+Y     + V +L+   R   GY  + DV   +   +D  +SFFL
Sbjct: 373 VIETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNGGYSGLRDVYIARESYDDVQQSFFL 432

Query: 388 AETVKYLWLLFDLAVGPDNLVENGPYKYIFSTEGHLLP 425
           AET+KYL+L+F      D+L+      +IF+TE H  P
Sbjct: 433 AETLKYLYLIFS----DDDLLPLE--HWIFNTEAHPFP 464
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Length = 503 Back     alignment and structure
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Length = 475 Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Length = 511 Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Length = 538 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query577
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 100.0
2ri9_A475 Mannosyl-oligosaccharide alpha-1,2-mannosidase; al 100.0
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 100.0
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 100.0
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 100.0
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 96.01
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.71
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.13
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 94.26
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 94.24
1dl2_A511 Class I alpha-1,2-mannosidase; alpha-alpha helix b 92.13
1x9d_A538 Endoplasmic reticulum mannosyl-oligosaccharide 1, 91.28
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 90.94
1nc5_A373 Hypothetical protein YTER; structural genomics, he 90.9
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 90.83
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 90.55
3pmm_A382 Putative cytoplasmic protein; structural genomics, 89.76
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 89.35
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 89.21
1nxc_A478 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; 86.09
1nc5_A373 Hypothetical protein YTER; structural genomics, he 85.84
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 85.23
1hcu_A503 Alpha-1,2-mannosidase; glycosylation, glycosyl hyd 82.87
3pmm_A382 Putative cytoplasmic protein; structural genomics, 81.94
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
Probab=100.00  E-value=1.1e-135  Score=1113.11  Aligned_cols=413  Identities=29%  Similarity=0.454  Sum_probs=373.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCCCcceEEEeccchhhhcCChHHHHHHHHHHhhhccccc-
Q 047597           10 EARQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFDI-   88 (577)
Q Consensus        10 ~~~~~r~~VK~aF~hAW~~Y~~~Awg~DEl~PlS~~~~d~~gg~g~TLVDSLDTL~IMGl~eEf~~A~~~V~~~l~F~~-   88 (577)
                      ...+||++||+||+|||++|++||||||||+|+||+++|+|||||+||||||||||||||++||++|++||. +++|++ 
T Consensus        11 ~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~d~~gg~g~TlVDsLDTL~IMgl~~Ef~~A~~~v~-~l~f~~~   89 (503)
T 1hcu_A           11 PNPTRAAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDERNGWGSSAIDGLDTAILMGDADIVNTILQYVP-QINFTTT   89 (503)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECTTTTSCHHHHHHHHHHHHTTCHHHHHHHHHHGG-GCCTTCC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCCccccccCcCCccCCCCCcceeehhhccchhhcCCHHHHHHHHHHHH-hCCCCcc
Confidence            346789999999999999999999999999999999999999999999999999999999999999999997 699998 


Q ss_pred             ---cccccceeehhhhcccchhhhhhcCc----------------------cCcccccccCCCCCCCCCcCCCCCCCCCC
Q 047597           89 ---NKTVSVFETTIRVLGGLLSAHLIARS----------------------SPRLLPAFDTPTGIPFGSVNLLHGVDEHE  143 (577)
Q Consensus        89 ---~~~VsvFETtIR~LGGLLSAY~LsgD----------------------ad~LlpAFdTpsGiP~~~vnl~~g~~~~~  143 (577)
                         +..|||||||||+||||||||+||+|                      ||+|+||||||||||+++||+++|....+
T Consensus        90 ~~~~~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~~~~~~~  169 (503)
T 1hcu_A           90 AVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTVFFNPTVRRSG  169 (503)
T ss_dssp             SSTTCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEEECSSSCEECC
T ss_pred             cccCCccchheeehhhHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccCCCCCC
Confidence               78999999999999999999999964                      89999999999999999999998766566


Q ss_pred             CcceeccccccchhchhhHHHhhCCchhHHHHHHHHHHHHhhhc----cCCeeeeeeeccCCceecccccccCCCchHHH
Q 047597          144 SKITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRS----KLNLVGAHINVFTGEWTQKDAGIGTSIDSFYE  219 (577)
Q Consensus       144 ~~~t~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~~~~~L~~~~~----~~GL~p~~i~~~tG~~~~~~~~lGa~~DSyYE  219 (577)
                      ...+++||+||++|||++||++|||++|+++|+++++.||+.++    .+||+|++||+.+|+|++..++|||++|||||
T Consensus       170 ~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YE  249 (503)
T 1hcu_A          170 ASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYE  249 (503)
T ss_dssp             CSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHH
T ss_pred             CCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHH
Confidence            66789999999999999999999999999999999999998654    68999999999999999999999999999999


Q ss_pred             hHHHHHhhcCch--HHHHHHHHHHHHHHhhcccCCc----ceEeccCCCccccccccccccccccchhhcCCCC------
Q 047597          220 YLLKAYLLFGDE--EYLYIFQESYQAAMHYLFNDPW----YVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDID------  287 (577)
Q Consensus       220 YLLK~~lL~gd~--~~~~~y~~a~~ai~~~L~~~p~----~~~~~~~sg~~~~~~~dhL~CF~pGmlaLgg~~~------  287 (577)
                      ||||+|+|+|+.  +|++||.+|+++|++||+++|+    +..+.+.+|....++|+||+||+|||++|||++.      
T Consensus       250 YLlK~~il~g~~~~~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~~~  329 (503)
T 1hcu_A          250 YLIKMYLYDPVAFAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLNEQKYI  329 (503)
T ss_dssp             HHHHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHTCHHHH
T ss_pred             HHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHHHhcCcccccHHHH
Confidence            999999999974  7999999999999999997652    2334444577788999999999999999999652      


Q ss_pred             -hHHHHHHHHHHHHh--hhCCCCCccccCccc------c-------------ccCCCccCCchhHHHHHHHHHHHcCChh
Q 047597          288 -PAVRTHAAFFSVWK--RYGFTPEGFNLATLT------I-------------QQGQKSYPLRPELIESTYLLYKATRDPR  345 (577)
Q Consensus       288 -~a~~~~~~~~~~~~--~~Gl~PE~f~~~~~~------~-------------~~~~~~Y~LRPE~IESlfyLyR~TGD~k  345 (577)
                       .|.+....|...|.  ++|++||+|+|..+.      .             ...+++|+||||+|||+|||||+||||+
T Consensus       330 ~~a~~L~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~  409 (503)
T 1hcu_A          330 DFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSK  409 (503)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHH
T ss_pred             HHHHHHHHHHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCHH
Confidence             35566667777775  489999999997543      1             1234789999999999999999999999


Q ss_pred             HHHHHHHHHHHHhHhcccCCcccccccccc---CCCCCCcchHHHHHHHHHHHhHhccCCCCCCcccCCC-----CcEEe
Q 047597          346 YLDAGRDMVASLQYGTRCPCGYCHISDVEF---HKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVENGP-----YKYIF  417 (577)
Q Consensus       346 Yrd~gW~if~aie~~~rt~~Gya~i~dV~~---~~~~D~mESFflAETLKYLYLLFsd~~~~d~~~~~~l-----d~~VF  417 (577)
                      ||||||+||++|+++|||+|||++|+||+.   ++++|+|||||||||||||||||||   + ++++  +     |+|||
T Consensus       410 yre~gw~if~ai~k~~r~~~Gya~i~dV~~~~~~~~~D~meSF~laETLKYlYLLFsd---~-~~i~--L~~~~~d~~VF  483 (503)
T 1hcu_A          410 WQDLAWEALSAIEDACRAGSAYSSINDVTQANGGGASDDMESFWFAEALKYAYLIFAE---E-SDVQ--VQATGGNKFVF  483 (503)
T ss_dssp             HHHHHHHHHHHHHHHHEETTEECCBSCTTSTTCSCBCSCBCHHHHHTHHHHHHHHHSC---C-CSSS--CCTTSCCCEEE
T ss_pred             HHHHHHHHHHHHHHHHhhccCCcccccccCCCCCCcCCccchHHHHHHHHHHheeccC---C-cccc--cccCCCCCeEE
Confidence            999999999999999999999999999998   7899999999999999999999995   3 4555  5     89999


Q ss_pred             cCCCccCCCCCC
Q 047597          418 STEGHLLPATPQ  429 (577)
Q Consensus       418 NTEaHPl~i~~~  429 (577)
                      |||||||||...
T Consensus       484 NTEAHPl~i~~~  495 (503)
T 1hcu_A          484 NTEAHPFSIRSS  495 (503)
T ss_dssp             CTTSCEEECCC-
T ss_pred             cCCCccccCCCc
Confidence            999999999864
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A* Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A* Back     alignment and structure
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1 Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 577
d1hcua_488 a.102.2.1 (A:) Class I alpha-1;2-mannosidase, cata 1e-141
d1nxca_467 a.102.2.1 (A:) Class I alpha-1;2-mannosidase, cata 1e-141
d1x9da1453 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidas 1e-137
d2ri9a1475 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosid 1e-135
d1dl2a_511 a.102.2.1 (A:) Class I alpha-1;2-mannosidase, cata 1e-133
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Length = 488 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Seven-hairpin glycosidases
family: Class I alpha-1;2-mannosidase, catalytic domain
domain: Class I alpha-1;2-mannosidase, catalytic domain
species: Trichoderma reesei [TaxId: 51453]

 Score =  417 bits (1072), Expect = e-141
 Identities = 121/480 (25%), Positives = 200/480 (41%), Gaps = 73/480 (15%)

Query: 15  RDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFT 74
              V+  F  +++ Y   AFP D+L P+S   +D   G+  + +D LDT  L+GD +   
Sbjct: 10  AAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDERNGWGSSAIDGLDTAILMGDADIVN 69

Query: 75  TSVEWIGK---NLQFDINKTVSVFETTIRVLGGLLSAHLIARSSP--------------- 116
           T ++++ +         N+  SVFET IR LGGLLSA+ + R                  
Sbjct: 70  TILQYVPQINFTTTAVANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLR 129

Query: 117 -------RLLPAFDTPTGIPFGSVNLLHGVDEHESKITSTAGGGTLTLEFGVLSRLTNDP 169
                   L  AF TP+G+P  +V     V    +   + A  G+L LE+  LS LT +P
Sbjct: 130 QAQTLANGLKVAFTTPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNP 189

Query: 170 IFEQVTKKAVLGIWARRSKL----NLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAY 225
            + Q+ +K    +   +        L+G  ++   G +          +DSFYEYL+K Y
Sbjct: 190 QYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMY 249

Query: 226 LLFG--DEEYLYIFQESYQAAMHYLFNDP----WYVEVNMDSAAIVWPLFNSLQAFWPGL 279
           L        Y   +     + + +L + P        ++  +     P    L +F  G 
Sbjct: 250 LYDPVAFAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGN 309

Query: 280 QVLAGD-------IDPAVRTHAAFFSVWKRY--GFTPEGFNL------------------ 312
            +L G        ID  ++  +++F  + +   G  PEGF                    
Sbjct: 310 FILGGILLNEQKYIDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGF 369

Query: 313 -ATLTIQQGQKSYPLRPELIESTYLLYKATRDPRYLDAGRDMVASLQYGTRCPCGYCHIS 371
            ++         Y LRPE +ES Y  Y+ T D ++ D   + +++++   R    Y  I+
Sbjct: 370 YSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALSAIEDACRAGSAYSSIN 429

Query: 372 DV---EFHKKEDHMESFFLAETVKYLWLLFDLAVGPDN---LVENGPYKYIFSTEGHLLP 425
           DV         D MESF+ AE +KY +L+F      ++   +   G  K++F+TE H   
Sbjct: 430 DVTQANGGGASDDMESFWFAEALKYAYLIFA----EESDVQVQATGGNKFVFNTEAHPFS 485
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 467 Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 453 Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Length = 475 Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 511 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query577
d1hcua_488 Class I alpha-1;2-mannosidase, catalytic domain {T 100.0
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 100.0
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 100.0
d2ri9a1475 Class I alpha-1;2-mannosidase, catalytic domain {F 100.0
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 100.0
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 98.32
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 94.9
d1nxca_467 Class I alpha-1;2-mannosidase, catalytic domain {M 93.59
d2d5ja1377 Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 92.53
d1nc5a_363 Hypothetical protein YteR {Bacillus subtilis [TaxI 91.61
d1x9da1453 Class I alpha-1;2-mannosidase, catalytic domain {H 90.35
d1dl2a_511 Class I alpha-1;2-mannosidase, catalytic domain {B 88.75
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 87.02
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 81.18
>d1hcua_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Trichoderma reesei [TaxId: 51453]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Seven-hairpin glycosidases
family: Class I alpha-1;2-mannosidase, catalytic domain
domain: Class I alpha-1;2-mannosidase, catalytic domain
species: Trichoderma reesei [TaxId: 51453]

Probab=100.00  E-value=2.9e-131  Score=1076.27  Aligned_cols=412  Identities=30%  Similarity=0.471  Sum_probs=370.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCCCcceEEEeccchhhhcCChHHHHHHHHHHhhhcccc----
Q 047597           12 RQLRDEVREMFYHAFDGYMEHAFPLDELRPLSCEGEDSLGGYALTLVDSLDTLALLGDRERFTTSVEWIGKNLQFD----   87 (577)
Q Consensus        12 ~~~r~~VK~aF~hAW~~Y~~~Awg~DEl~PlS~~~~d~~gg~g~TLVDSLDTL~IMGl~eEf~~A~~~V~~~l~F~----   87 (577)
                      ..||++||+||+|||++|++||||||||+|+||++.|.+||||+||||||||||||||++||++|++||.+ ++|+    
T Consensus         7 ~~R~~~Vk~~F~~aw~~Y~~~Awg~DEl~PiS~~~~d~~~g~g~TlVDsLdTL~iMgl~~ef~~a~~~v~~-i~f~~~~~   85 (488)
T d1hcua_           7 PTRAAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDDERNGWGSSAIDGLDTAILMGDADIVNTILQYVPQ-INFTTTAV   85 (488)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEECTTTTSCHHHHHHHHHHHHTTCHHHHHHHHHHGGG-CCTTCCSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCCCCCCCCchhHHHHHHHHHHHcCChHHHHHHHHHHHh-ccCCcccc
Confidence            35689999999999999999999999999999999999999999999999999999999999999999975 6665    


Q ss_pred             ccccccceeehhhhcccchhhhhhcCc----------------------cCcccccccCCCCCCCCCcCCCCCCCCCCCc
Q 047597           88 INKTVSVFETTIRVLGGLLSAHLIARS----------------------SPRLLPAFDTPTGIPFGSVNLLHGVDEHESK  145 (577)
Q Consensus        88 ~~~~VsvFETtIR~LGGLLSAY~LsgD----------------------ad~LlpAFdTpsGiP~~~vnl~~g~~~~~~~  145 (577)
                      .++.|||||||||+||||||||+|+++                      ||+|+|||+||+|||+++||++++..+.+..
T Consensus        86 ~~~~vsvFEttIR~LGGLLsay~Ls~~~~~~~~~~~~~~~~lL~kA~dL~d~Ll~aF~t~tgiP~~~vnl~~~~~~~~~~  165 (488)
T d1hcua_          86 ANQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTVFFNPTVRRSGAS  165 (488)
T ss_dssp             TTCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEEECSSSCEECCCS
T ss_pred             cCCccchhhhhHHHHHHHHHHHHHccCcccccccccchhhHHHHHHHHHHHHHHHhhcCCCCCccceeeccccCCCCCCC
Confidence            456899999999999999999999875                      8999999999999999999999988777778


Q ss_pred             ceeccccccchhchhhHHHhhCCchhHHHHHHHHHHHHhhhcc----CCeeeeeeeccCCceecccccccCCCchHHHhH
Q 047597          146 ITSTAGGGTLTLEFGVLSRLTNDPIFEQVTKKAVLGIWARRSK----LNLVGAHINVFTGEWTQKDAGIGTSIDSFYEYL  221 (577)
Q Consensus       146 ~t~lAe~GSl~LEF~~LS~lTGd~kY~~~a~~~~~~L~~~~~~----~GL~p~~i~~~tG~~~~~~~~lGa~~DSyYEYL  221 (577)
                      .+++||+||++|||++||++|||++|+++|+++++.||+.++.    +||+|++||+.+|+|.+..+++||++|||||||
T Consensus       166 ~~~~Ae~gsl~LEF~~LS~lTGd~kY~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~~g~~~~~~~~~Ga~~DS~YEYL  245 (488)
T d1hcua_         166 SNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYL  245 (488)
T ss_dssp             EEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHH
T ss_pred             CCcccccchHHHHHHHHHHHhCChHHHHHHHHHHHHHHhhccCCcCCCCCcCceecCCCCceeccceeeccccchHHHHH
Confidence            8999999999999999999999999999999999999987543    599999999999999999999999999999999


Q ss_pred             HHHHhhcC--chHHHHHHHHHHHHHHhhcccCC----cceEeccCCCccccccccccccccccchhhcCCC-------Ch
Q 047597          222 LKAYLLFG--DEEYLYIFQESYQAAMHYLFNDP----WYVEVNMDSAAIVWPLFNSLQAFWPGLQVLAGDI-------DP  288 (577)
Q Consensus       222 LK~~lL~g--d~~~~~~y~~a~~ai~~~L~~~p----~~~~~~~~sg~~~~~~~dhL~CF~pGmlaLgg~~-------~~  288 (577)
                      ||+|++++  ++.|++||.++++++++||..+|    .+..+.+.+|....++|+||+||+|||++|||++       +.
T Consensus       246 lK~~il~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~hL~cF~gGl~aLg~~~~~~~~~~~~  325 (488)
T d1hcua_         246 IKMYLYDPVAFAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLNEQKYIDF  325 (488)
T ss_dssp             HHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHTCHHHHHH
T ss_pred             HHHHHhcCcchHHHHHHHHHHHHHHHHHhccCCCCccCceEEeccCCCCCCCcccccccccchhhhhccccccchHHHHH
Confidence            99999998  47899999999999999998654    2333555667788899999999999999999963       45


Q ss_pred             HHHHHHHHHHHHhh--hCCCCCccccCccc-------------------cccCCCccCCchhHHHHHHHHHHHcCChhHH
Q 047597          289 AVRTHAAFFSVWKR--YGFTPEGFNLATLT-------------------IQQGQKSYPLRPELIESTYLLYKATRDPRYL  347 (577)
Q Consensus       289 a~~~~~~~~~~~~~--~Gl~PE~f~~~~~~-------------------~~~~~~~Y~LRPE~IESlfyLyR~TGD~kYr  347 (577)
                      |.+++..|+.+|+.  +|++||+|+|..+.                   +...+++|+||||+|||+|||||+||||+||
T Consensus       326 a~~l~~~c~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~iES~fyLyR~Tgd~~yr  405 (488)
T d1hcua_         326 GIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQ  405 (488)
T ss_dssp             HHHHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHHHH
T ss_pred             HHHHHHHHHHHHHHhhhccCcceeecccccccccCCCcchhhcccccccceecccccCCCchHHHHHHHHHHHhCCHHHH
Confidence            77888899888874  69999999986421                   1234678999999999999999999999999


Q ss_pred             HHHHHHHHHHhHhcccCCcccccccccc---CCCCCCcchHHHHHHHHHHHhHhccCCCCCCcccC---CCCcEEecCCC
Q 047597          348 DAGRDMVASLQYGTRCPCGYCHISDVEF---HKKEDHMESFFLAETVKYLWLLFDLAVGPDNLVEN---GPYKYIFSTEG  421 (577)
Q Consensus       348 d~gW~if~aie~~~rt~~Gya~i~dV~~---~~~~D~mESFflAETLKYLYLLFsd~~~~d~~~~~---~ld~~VFNTEa  421 (577)
                      ||||+||++|+++|||+|||++|+||+.   ++++|+|||||||||||||||||+|   ++ ++++   ++|+|||||||
T Consensus       406 ~~gw~if~ai~~~~rt~~G~a~i~dV~~~~~~~~~D~meSF~laETLKYlYLlF~d---~~-~~~l~~~~~d~~VfnTEa  481 (488)
T d1hcua_         406 DLAWEALSAIEDACRAGSAYSSINDVTQANGGGASDDMESFWFAEALKYAYLIFAE---ES-DVQVQATGGNKFVFNTEA  481 (488)
T ss_dssp             HHHHHHHHHHHHHHEETTEECCBSCTTSTTCSCBCSCBCHHHHHTHHHHHHHHHSC---CC-SSSCCTTSCCCEEECTTS
T ss_pred             HHHHHHHHHHHHHhccCcCcccccccccCCCCCcCCcccchHHHHHHHHHHhhcCC---Cc-ccccccCCCCCeEEcCCC
Confidence            9999999999999999999999999975   4689999999999999999999996   33 4431   23899999999


Q ss_pred             ccCCCCC
Q 047597          422 HLLPATP  428 (577)
Q Consensus       422 HPl~i~~  428 (577)
                      |||||..
T Consensus       482 HPl~i~s  488 (488)
T d1hcua_         482 HPFSIRS  488 (488)
T ss_dssp             CEEECCC
T ss_pred             cceecCC
Confidence            9999863
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ri9a1 a.102.2.1 (A:1036-1510) Class I alpha-1;2-mannosidase, catalytic domain {Fungus (Penicillium citrinum) [TaxId: 5077]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nxca_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Back     information, alignment and structure
>d1nc5a_ a.102.1.6 (A:) Hypothetical protein YteR {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1x9da1 a.102.2.1 (A:245-697) Class I alpha-1;2-mannosidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1dl2a_ a.102.2.1 (A:) Class I alpha-1;2-mannosidase, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure