Citrus Sinensis ID: 047621

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
MAPAQNRNRAPKVSVLFLFLTYCSLQHSSSSAQSSPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYLIKFKYIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGTAQVDDAKKAAASADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY
ccccccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccccccccccEEEEEcccccccccccccccccccccHHHHHHHHHHcHHHHHccccccccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHccEEEccccccccccccccccEEEEcccccccccccccccccccccccHHHHHHHHHcccEEccccccccccHHHHHHHHHHHccccEEEEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccccccccEEEEcccccHHHHHHHHHHHccccccccccccccccccc
cccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHccccccccccccEEEEcccccccccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHccccEEEEEEccccccEEEEccccccccccccccHHHHHHHHHHHHHHHcccccccccccEEEEEEEEEEEcccccccccEEEEEcHHHHHHHHcHHHHHHHccHHHHHHHHcccccccccHHHHHHHHHccccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccEEEEEcccccccccHHcccEEEEEcccccccccccccccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccEEEEEEcccccccccccccccccccccHHHHHHHHHHHccccEEEEEEccccEEcccccccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccc
mapaqnrnrapkVSVLFLFLTYCSlqhssssaqsspvfacdvvsnpslaslgfcntslgidlRVGDLVKRLTLQEKITFLVDsagsvsrlgipkyewWSEAlhgvsyvgpgthfsnvvpgatsfpQVILTAASFNASLFQAIGKVVSTEARAMYNVGlagltfwspninifrdprwgrgqetpgedpllaskYATGyvkglqqtdggspnrLKVAACCKhytaydldnwkgtdryhfNAMVIYTYYLIKFKYIvsdcdsvdvlynsqhytktpEEAAAKSILAGLdlncgsflgKHTEAAVKAGLVNESAIDHAISNNFATLMRlgffdghpskqpygqlgpkdvcTQANQDLALDAARQGIVLLKntagslplsptaiknlavigpnanvTKTMIgnyegtpckyttplqGLAAVVATIYQAGcsnvqcgtaQVDDAKKAAASADATVLVMGAdqsieaeshdrldlllpgqqQLLITEVAKVAKGPVILIIMSgggfdisfakndpkitSILWvgypgqaggaaIADVcfgrynpsgrlpmtwypqsy
mapaqnrnrapkvSVLFLFLTYCSLQHSSSSAQSSPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITflvdsagsvsrLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLagltfwspniNIFRDPRWGRGQETPGEDPLLASKYATGYVKGlqqtdggspnrLKVAACCKHYTaydldnwkgtdRYHFNAMVIYTYYLIKFKYIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGTAQVDDAKKAAASADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPsgrlpmtwypqsy
MAPAQNRNRAPKVSVLFLFLTYCslqhssssaqssPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYLIKFKYIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGTAQVddakkaaasadaTVLVMGADQSIEAESHDRldlllpgqqqllITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY
************VSVLFLFLTYCSLQ**********VFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGR*********LLASKYATGYVKGLQQTD**SPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYLIKFKYIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHP***PYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGTAQVDDAKKAAASADATVLVMGADQ*I****HDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWY****
**************VLFLFLTYCSLQHSSSSAQSSPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYLIKFKYIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGTAQVDDAKKAAASADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYP**Y
*********APKVSVLFLFLTYCSL***********VFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYLIKFKYIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGTA**********SADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY
******RNRAPKVSVLFLFLTYCSLQHSSSSAQSSPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYLIKFKYIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGTAQVDDAKKAAASADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAPAQNRNRAPKVSVLFLFLTYCSLQHSSSSAQSSPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYLIKFKYIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGTAQVDDAKKAAASADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query550 2.2.26 [Sep-21-2011]
Q9FLG1 784 Beta-D-xylosidase 4 OS=Ar yes no 0.996 0.698 0.720 0.0
A5JTQ3 774 Beta-xylosidase/alpha-L-a N/A no 0.994 0.706 0.701 0.0
Q9LXD6 773 Beta-D-xylosidase 3 OS=Ar no no 0.985 0.701 0.685 0.0
A5JTQ2 774 Beta-xylosidase/alpha-L-a N/A no 0.994 0.706 0.673 0.0
Q9FGY1 774 Beta-D-xylosidase 1 OS=Ar no no 0.963 0.684 0.585 0.0
Q9LJN4 781 Probable beta-D-xylosidas no no 0.967 0.681 0.563 0.0
Q94KD8 768 Probable beta-D-xylosidas no no 0.963 0.690 0.565 0.0
Q9SGZ5 767 Probable beta-D-xylosidas no no 0.934 0.670 0.513 1e-160
Q9LXA8 792 Probable beta-D-xylosidas no no 0.974 0.676 0.436 1e-144
A1DJS5 771 Probable exo-1,4-beta-xyl N/A no 0.907 0.647 0.427 1e-103
>sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 Back     alignment and function desciption
 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 431/598 (72%), Positives = 470/598 (78%), Gaps = 50/598 (8%)

Query: 2   APAQNRNRAPKVSV---LFLFLTYCSLQHSSSSAQSSPVFACDVVSNPSLASLGFCNTSL 58
           +P   RNRAP  SV     +FL +     + S+AQSSPVFACDV +NPSLA+ GFCNT L
Sbjct: 5   SPLTRRNRAPPSSVSSVYLIFLCFFLYFLNFSNAQSSPVFACDVAANPSLAAYGFCNTVL 64

Query: 59  GIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVV 118
            I+ RV DLV RLTLQEKI FLV  A  V+RLGIP YEWWSEALHGVSY+GPGTHFS+ V
Sbjct: 65  KIEYRVADLVARLTLQEKIGFLVSKANGVTRLGIPTYEWWSEALHGVSYIGPGTHFSSQV 124

Query: 119 PGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGR 178
           PGATSFPQVILTAASFN SLFQAIGKVVSTEARAMYNVGLAGLT+WSPN+NIFRDPRWGR
Sbjct: 125 PGATSFPQVILTAASFNVSLFQAIGKVVSTEARAMYNVGLAGLTYWSPNVNIFRDPRWGR 184

Query: 179 GQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFN 238
           GQETPGEDPLLASKYA+GYVKGLQ+TDGG  NRLKVAACCKHYTAYD+DNWKG +RY FN
Sbjct: 185 GQETPGEDPLLASKYASGYVKGLQETDGGDSNRLKVAACCKHYTAYDVDNWKGVERYSFN 244

Query: 239 AMV----IYTYYLIKFK------------------------------------------Y 252
           A+V    +   Y   FK                                          Y
Sbjct: 245 AVVTQQDMDDTYQPPFKSCVVDGNVASVMCSYNQVNGKPTCADPDLLSGVIRGEWKLNGY 304

Query: 253 IVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAID 312
           IVSDCDSVDVLY +QHYTKTP EAAA SILAGLDLNCGSFLG+HTE AVK+GLVNE+AID
Sbjct: 305 IVSDCDSVDVLYKNQHYTKTPAEAAAISILAGLDLNCGSFLGQHTEEAVKSGLVNEAAID 364

Query: 313 HAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSL 372
            AISNNF TLMRLGFFDG+P  Q YG LGP DVCT ANQ+LA DAARQGIVLLKNT G L
Sbjct: 365 KAISNNFLTLMRLGFFDGNPKNQIYGGLGPTDVCTSANQELAADAARQGIVLLKNT-GCL 423

Query: 373 PLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCGT 432
           PLSP +IK LAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLA  V+T Y  GCSNV C  
Sbjct: 424 PLSPKSIKTLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAGTVSTTYLPGCSNVACAV 483

Query: 433 AQVDDAKKAAASADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILI 492
           A V  A K AA+AD +VLV+GADQSIEAES DR+DL LPGQQQ L+ +VAK AKGPV+L+
Sbjct: 484 ADVAGATKLAATADVSVLVIGADQSIEAESRDRVDLHLPGQQQELVIQVAKAAKGPVLLV 543

Query: 493 IMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY 550
           IMSGGGFDI+FAKNDPKI  ILWVGYPG+AGG AIAD+ FGRYNPSG+LPMTWYPQSY
Sbjct: 544 IMSGGGFDITFAKNDPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSY 601
Beta-D-xylosidase showing an optimal efficiency with the natural substrate xylobiose.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 7
>sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 Back     alignment and function description
>sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 Back     alignment and function description
>sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 Back     alignment and function description
>sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 Back     alignment and function description
>sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 Back     alignment and function description
>sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 Back     alignment and function description
>sp|A1DJS5|XYND_NEOFI Probable exo-1,4-beta-xylosidase xlnD OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=xlnD PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query550
255545293 777 Beta-glucosidase, putative [Ricinus comm 0.943 0.667 0.789 0.0
297745522 751 unnamed protein product [Vitis vinifera] 0.987 0.723 0.748 0.0
359485890 774 PREDICTED: beta-xylosidase/alpha-L-arabi 0.987 0.701 0.748 0.0
224054312 741 predicted protein [Populus trichocarpa] 0.938 0.696 0.789 0.0
224070626 773 predicted protein [Populus trichocarpa] 1.0 0.711 0.755 0.0
359481045 774 PREDICTED: beta-xylosidase/alpha-L-arabi 0.987 0.701 0.738 0.0
297797477 784 beta-xylosidase 4 [Arabidopsis lyrata su 0.996 0.698 0.725 0.0
15237736 784 beta-D-xylosidase 4 [Arabidopsis thalian 0.996 0.698 0.720 0.0
449438167 782 PREDICTED: beta-xylosidase/alpha-L-arabi 0.949 0.667 0.734 0.0
449479116 809 PREDICTED: beta-xylosidase/alpha-L-arabi 0.949 0.645 0.734 0.0
>gi|255545293|ref|XP_002513707.1| Beta-glucosidase, putative [Ricinus communis] gi|223547158|gb|EEF48654.1| Beta-glucosidase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  900 bits (2325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 446/565 (78%), Positives = 474/565 (83%), Gaps = 46/565 (8%)

Query: 32  AQSSPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLG 91
           AQSSPVFACDV SNPSLAS GFCN SLGI  RV DLV RLTLQEKI FLV+SAGSVSRLG
Sbjct: 35  AQSSPVFACDVKSNPSLASFGFCNVSLGISDRVTDLVNRLTLQEKIGFLVNSAGSVSRLG 94

Query: 92  IPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEAR 151
           IPKYEWWSEALHGVSYVGPGTHFSN+VPGATSFPQVILTAASFNASLF+AIGKVVSTEAR
Sbjct: 95  IPKYEWWSEALHGVSYVGPGTHFSNIVPGATSFPQVILTAASFNASLFEAIGKVVSTEAR 154

Query: 152 AMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNR 211
           AMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLL+SKY + YV+GLQQTD G   R
Sbjct: 155 AMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLSSKYGSCYVRGLQQTDNGDSER 214

Query: 212 LKVAACCKHYTAYDLDNWKGTDRYHFNAMV-------------------------IYTYY 246
           LKVAACCKHYTAYDLDNWKGTDRYHFNA+V                         + +Y 
Sbjct: 215 LKVAACCKHYTAYDLDNWKGTDRYHFNAVVTKQDLDDTFQPPFKSCVIDGNVASVMCSYN 274

Query: 247 LIKFK---------------------YIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGL 285
            +  K                     YIVSDCDSVDV+YNSQHYTKTPEEAAA +ILAGL
Sbjct: 275 QVNGKPTCADPDLLAGIIRGEWKLNGYIVSDCDSVDVIYNSQHYTKTPEEAAAITILAGL 334

Query: 286 DLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDV 345
           DLNCGSFLGKHTEAAV AGL+N SA+D A+SNNFATLMRLGFFDG PSKQ YG+LGPKDV
Sbjct: 335 DLNCGSFLGKHTEAAVNAGLLNVSAVDKAVSNNFATLMRLGFFDGDPSKQLYGKLGPKDV 394

Query: 346 CTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCK 405
           CT  NQ+LA +AARQGIVLLKN+ GSLPLSPTAIK LAVIGPNANVTKTMIGNYEGTPCK
Sbjct: 395 CTAVNQELAREAARQGIVLLKNSPGSLPLSPTAIKTLAVIGPNANVTKTMIGNYEGTPCK 454

Query: 406 YTTPLQGLAAVVATIYQAGCSNVQCGTAQVDDAKKAAASADATVLVMGADQSIEAESHDR 465
           YTTPLQGL A VAT Y AGCSNV C  AQVDDAKK AASADATVLVMGADQSIEAES DR
Sbjct: 455 YTTPLQGLTASVATTYLAGCSNVACAAAQVDDAKKLAASADATVLVMGADQSIEAESRDR 514

Query: 466 LDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGA 525
           +D+LLPGQQQLLIT+VA V+KGPVIL+IMSGGG D+SFAK + KITSILWVGYPG+AGGA
Sbjct: 515 VDVLLPGQQQLLITQVANVSKGPVILVIMSGGGMDVSFAKTNDKITSILWVGYPGEAGGA 574

Query: 526 AIADVCFGRYNPSGRLPMTWYPQSY 550
           AIADV FG YNPSGRLPMTWYPQ+Y
Sbjct: 575 AIADVIFGYYNPSGRLPMTWYPQAY 599

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297745522|emb|CBI40687.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359485890|ref|XP_002264183.2| PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|224054312|ref|XP_002298197.1| predicted protein [Populus trichocarpa] gi|222845455|gb|EEE83002.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224070626|ref|XP_002303181.1| predicted protein [Populus trichocarpa] gi|222840613|gb|EEE78160.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359481045|ref|XP_002268626.2| PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Vitis vinifera] gi|296089342|emb|CBI39114.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|297797477|ref|XP_002866623.1| beta-xylosidase 4 [Arabidopsis lyrata subsp. lyrata] gi|297312458|gb|EFH42882.1| beta-xylosidase 4 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|15237736|ref|NP_201262.1| beta-D-xylosidase 4 [Arabidopsis thaliana] gi|75262663|sp|Q9FLG1.1|BXL4_ARATH RecName: Full=Beta-D-xylosidase 4; Short=AtBXL4; Flags: Precursor gi|10178060|dbj|BAB11424.1| beta-xylosidase [Arabidopsis thaliana] gi|332010539|gb|AED97922.1| beta-D-xylosidase 4 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449438167|ref|XP_004136861.1| PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449479116|ref|XP_004155509.1| PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query550
TAIR|locus:2174809 784 XYL4 "beta-D-xylosidase 4" [Ar 0.541 0.380 0.749 2.6e-219
TAIR|locus:2144756 773 BXL3 "AT5G09730" [Arabidopsis 0.541 0.385 0.712 3.9e-203
TAIR|locus:2157994 774 BXL1 "beta-xylosidase 1" [Arab 0.54 0.383 0.58 1.3e-169
TAIR|locus:2091236 781 AT3G19620 [Arabidopsis thalian 0.541 0.381 0.549 1.9e-166
TAIR|locus:2196060 768 BXL2 "beta-xylosidase 2" [Arab 0.543 0.389 0.573 8.5e-162
TAIR|locus:2029391 767 AT1G78060 [Arabidopsis thalian 0.543 0.389 0.5 2.9e-146
TAIR|locus:2142434 792 AT5G10560 [Arabidopsis thalian 0.543 0.377 0.448 1.3e-131
ASPGD|ASPL0000029139 763 bxlB [Emericella nidulans (tax 0.385 0.277 0.470 5.7e-88
UNIPROTKB|Q5ATH9 763 bxlB "Exo-1,4-beta-xylosidase 0.385 0.277 0.470 5.7e-88
UNIPROTKB|P83344 461 P83344 "Putative beta-D-xylosi 0.496 0.592 0.565 7.6e-80
TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1161 (413.8 bits), Expect = 2.6e-219, Sum P(2) = 2.6e-219
 Identities = 224/299 (74%), Positives = 242/299 (80%)

Query:   252 YIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAI 311
             YIVSDCDSVDVLY +QHYTKTP EAAA SILAGLDLNCGSFLG+HTE AVK+GLVNE+AI
Sbjct:   304 YIVSDCDSVDVLYKNQHYTKTPAEAAAISILAGLDLNCGSFLGQHTEEAVKSGLVNEAAI 363

Query:   312 DHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGS 371
             D AISNNF TLMRLGFFDG+P  Q YG LGP DVCT ANQ+LA DAARQGIVLLKNT G 
Sbjct:   364 DKAISNNFLTLMRLGFFDGNPKNQIYGGLGPTDVCTSANQELAADAARQGIVLLKNT-GC 422

Query:   372 LPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVATIYQAGCSNVQCG 431
             LPLSP +IK LAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLA  V+T Y  GCSNV C 
Sbjct:   423 LPLSPKSIKTLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAGTVSTTYLPGCSNVACA 482

Query:   432 TAQVXXXXXXXXXXXXTVLVMGADQSIEAESHDRXXXXXXXXXXXXITEVAKVAKGPVIL 491
              A V            +VLV+GADQSIEAES DR            + +VAK AKGPV+L
Sbjct:   483 VADVAGATKLAATADVSVLVIGADQSIEAESRDRVDLHLPGQQQELVIQVAKAAKGPVLL 542

Query:   492 IIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY 550
             +IMSGGGFDI+FAKNDPKI  ILWVGYPG+AGG AIAD+ FGRYNPSG+LPMTWYPQSY
Sbjct:   543 VIMSGGGFDITFAKNDPKIAGILWVGYPGEAGGIAIADIIFGRYNPSGKLPMTWYPQSY 601
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009044 "xylan 1,4-beta-xylosidase activity" evidence=IDA
GO:0045493 "xylan catabolic process" evidence=IDA
GO:0005618 "cell wall" evidence=IDA
GO:0048046 "apoplast" evidence=IDA
TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029139 bxlB [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ATH9 bxlB "Exo-1,4-beta-xylosidase bxlB" [Aspergillus nidulans FGSC A4 (taxid:227321)] Back     alignment and assigned GO terms
UNIPROTKB|P83344 P83344 "Putative beta-D-xylosidase" [Prunus persica (taxid:3760)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A5JTQ3XYL2_MEDSV3, ., 2, ., 1, ., 5, 50.70130.99450.7067N/Ano
Q9FLG1BXL4_ARATH3, ., 2, ., 1, ., 3, 70.72070.99630.6989yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.370.946
3rd Layer3.2.10.963

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query550
PLN03080 779 PLN03080, PLN03080, Probable beta-xylosidase; Prov 0.0
pfam01915221 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam 1e-57
PRK15098 765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 4e-39
COG1472397 COG1472, BglX, Beta-glucosidase-related glycosidas 1e-37
pfam00933296 pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil 1e-34
PRK15098 765 PRK15098, PRK15098, beta-D-glucoside glucohydrolas 4e-15
>gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional Back     alignment and domain information 
 Score =  632 bits (1632), Expect = 0.0
 Identities = 288/589 (48%), Positives = 371/589 (62%), Gaps = 57/589 (9%)

Query: 16  LFLFLTYCSLQHSSSSAQSSPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQE 75
           LFL L   +L  +  +A + P F C     P+ ++  FCN SL I  R   LV  LTL E
Sbjct: 8   LFLLLFLLALGATFKAADAHPQFPC---KPPTFSAYPFCNASLPIPARARSLVSLLTLDE 64

Query: 76  KITFLVDSAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSN-VVPGATSFPQVILTAASF 134
           KI  L ++A  V RLGIP YEWWSE+LHG++  GPG  F++  V  ATSFPQVIL+AASF
Sbjct: 65  KIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNGPGVSFNSGPVSAATSFPQVILSAASF 124

Query: 135 NASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKYA 194
           N SL++AIG  ++ EARAMYN G AGLTFW+PNINIFRDPRWGRGQETPGEDP +AS Y+
Sbjct: 125 NRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGEDPAVASAYS 184

Query: 195 TGYVKGLQQT------DGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMV----IYT 244
             +VKG Q        D G   +L ++ACCKHYTAYDL+ W    RY FNA+V    +  
Sbjct: 185 VEFVKGFQGGKWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMED 244

Query: 245 YYLIKFK-----------------------------------------YIVSDCDSVDVL 263
            Y   FK                                         YI SDCD+V  +
Sbjct: 245 TYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQKARDEWGFQGYITSDCDAVATI 304

Query: 264 YNSQHYTKTPEEAAAKSILAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLM 323
           +  Q YTK+PE+A A  + AG+D+NCGS++ +HT++A++ G V E  ID A+ N F+  +
Sbjct: 305 FEYQTYTKSPEDAVADVLKAGMDINCGSYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQL 364

Query: 324 RLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLA 383
           RLG FDG P    YG+LGP +VCT+ +++LAL+AARQGIVLLKN    LPL+ + + +LA
Sbjct: 365 RLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLKNDKKFLPLNKSEVSSLA 424

Query: 384 VIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVVA-TIYQAGCSNVQC-GTAQVDDAKKA 441
           +IGP AN    + G+Y G PC+ TT  +GL A V  T + AGC +V C       +A   
Sbjct: 425 IIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAI 484

Query: 442 AASADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDI 501
           A  AD  V+V G D S E E HDR+ LLLPG+Q  LI+ VA V+K PV+L++  GG  D+
Sbjct: 485 AKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDV 544

Query: 502 SFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY 550
           SFAK DP+I SILW+GYPG+ GG A+A++ FG YNP GRLPMTWYP+S+
Sbjct: 545 SFAKQDPRIASILWIGYPGEVGGQALAEIIFGDYNPGGRLPMTWYPESF 593

Length = 779
>gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain Back     alignment and domain information
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain Back     alignment and domain information
>gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 550
PLN03080 779 Probable beta-xylosidase; Provisional 100.0
PRK15098 765 beta-D-glucoside glucohydrolase; Provisional 100.0
COG1472397 BglX Beta-glucosidase-related glycosidases [Carboh 100.0
PF00933299 Glyco_hydro_3: Glycosyl hydrolase family 3 N termi 100.0
PRK05337337 beta-hexosaminidase; Provisional 100.0
PF01915227 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter 99.97
>PLN03080 Probable beta-xylosidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=6.6e-116  Score=989.38  Aligned_cols=534  Identities=53%  Similarity=0.941  Sum_probs=473.5

Q ss_pred             HHHHHHHHHHhhhcccCCCCCCCCccccCCCCCCccCCCcCCCCCCHHHHHHHHHhcCCHHHHHHhhcCCCCccCCCCCC
Q 047621           14 SVLFLFLTYCSLQHSSSSAQSSPVFACDVVSNPSLASLGFCNTSLGIDLRVGDLVKRLTLQEKITFLVDSAGSVSRLGIP   93 (550)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ll~~mTleEKv~ql~~~~~~~~~~gip   93 (550)
                      .+++++++.++........+..|+|+|+   +++.+.+||||+++|+++|+++||++||+|||++||.+.+.+++|+|||
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~---~~~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP   82 (779)
T PLN03080          6 RPLFLLLFLLALGATFKAADAHPQFPCK---PPTFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIP   82 (779)
T ss_pred             hhHHHHHHHHhcchhcccccCCCCcCCC---CccccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCC
Confidence            3445544444444444445567999999   4567789999999999999999999999999999999989999999999


Q ss_pred             cccccccccccccccCCCcccc-CCCCCCCcCchHHHHHhhcCHHHHHHHHHHHHHHHHHhhhcCCccceeeccccccCC
Q 047621           94 KYEWWSEALHGVSYVGPGTHFS-NVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFR  172 (550)
Q Consensus        94 ~~~~~~d~~~Gv~~~~~g~~~~-~~~~~~t~fP~~~~laAt~d~~l~~~~g~~~~~E~ra~~~~g~~Gi~~~aP~vdi~r  172 (550)
                      .|.||+|++||++..++|++|. +.+.++|.||++|++|||||++|++++|+++|+|+|+++|.|++|+++|+|++||+|
T Consensus        83 ~~~~~~d~~hGv~~~~~g~~~~~g~~~~aT~FP~~i~laAt~d~~L~~~~g~~ig~E~ra~g~~~~~G~~~~aP~vdi~r  162 (779)
T PLN03080         83 PYEWWSESLHGLADNGPGVSFNSGPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFR  162 (779)
T ss_pred             ccceecccccccccCCCccccccCCCCCceECchHHhhhhcCCHHHHHHHHHHHHHHHHhhccccccCcceeeccccccc
Confidence            9999999999999888888885 445679999999999999999999999999999999998877668888999999999


Q ss_pred             CCCCCccCCCCCCCHHHHHHHHHHHHHHhccCCCC------CCCCceEEEeecccccccCCCCCC---------------
Q 047621          173 DPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGG------SPNRLKVAACCKHYTAYDLDNWKG---------------  231 (550)
Q Consensus       173 ~P~~gr~~e~~geDp~lv~~~a~a~v~Glq~~~~G------~~~~~~v~a~~KHFpg~~~~~~~~---------------  231 (550)
                      ||+|||++|||||||+++++|+.+||+|||+.+..      ..++.+|++|+||||||++++|++               
T Consensus       163 dPrwGR~~EtfGEDP~lv~~~a~a~V~GlQ~~~~~~~~~~~~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L  242 (779)
T PLN03080        163 DPRWGRGQETPGEDPAVASAYSVEFVKGFQGGKWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDM  242 (779)
T ss_pred             CCCcCccccCcCCCHHHHHHHHHHHHHHhcCCCcccccccccCCCceEEEECCeeeCCCccccCCccccCccCccCHHHH
Confidence            99999999999999999999999999999985100      124567999999999999986542               


Q ss_pred             --cccccchhhhh--------ccccc-------------------cce-EEEEcCcchhHHhhhcCcccCCHHHHHHHHH
Q 047621          232 --TDRYHFNAMVI--------YTYYL-------------------IKF-KYIVSDCDSVDVLYNSQHYTKTPEEAAAKSI  281 (550)
Q Consensus       232 --~~~~~f~a~v~--------~syn~-------------------Lgf-G~v~sD~~~m~~~~~~~~~~~~~~~a~~~ai  281 (550)
                        ++..||+++|.        ||||+                   ||| |+|||||++|..+.+.++|+.+.+|++++||
T Consensus       243 ~e~yl~PF~~ai~~g~~~~VM~sYn~vnG~Pa~~s~~lL~~LR~ewGF~G~VvSD~~a~~~~~~~~~~~~~~~ea~~~Al  322 (779)
T PLN03080        243 EDTYQPPFKSCIQEGKASCLMCSYNQVNGVPACARKDLLQKARDEWGFQGYITSDCDAVATIFEYQTYTKSPEDAVADVL  322 (779)
T ss_pred             HhhhhHHHHHHHHhcCCeEEEeCCcCcCCccccCCHHHHHHHHHHhCcCCeEecchHHHHHhhhcccccCCHHHHHHHHH
Confidence              23458887764        88888                   699 9999999999999988888778999999999


Q ss_pred             HhccCCCCcchhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCccccchHHHHHHHHHHHhc
Q 047621          282 LAGLDLNCGSFLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQG  361 (550)
Q Consensus       282 ~AG~Dl~~~~~~~~~l~~av~~g~i~~~~ld~a~~ril~~k~~~glf~~~p~~~~~~~~~~~~v~~~~h~~la~eaA~~s  361 (550)
                      +||+||+|+.++.++|.+||++|++++++||+|++|||++|+|+|+||+++...+|.+.....+++++|+++|+|+|++|
T Consensus       323 ~AG~Dl~~~~~~~~~l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~~h~~lA~eaA~~s  402 (779)
T PLN03080        323 KAGMDINCGSYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQG  402 (779)
T ss_pred             HcCCCcccCchhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCHHHHHHHHHHHHhC
Confidence            99999999988888999999999999999999999999999999999965444456555667889999999999999999


Q ss_pred             chhcccCCCCCCCCCCCCCeEEEEcCCCcccccccccccCCCCccCChHhhhccce-eEEEecCCCCccCC-chhHHHHH
Q 047621          362 IVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEGTPCKYTTPLQGLAAVV-ATIYQAGCSNVQCG-TAQVDDAK  439 (550)
Q Consensus       362 ivLLKN~~~~LPL~~~~~~kVaviG~~a~~~~~~~G~~~g~~~~~~t~~~~l~~~~-~~~~~~g~~~~~~~-~~~~~~a~  439 (550)
                      ||||||++++|||++.+.+||+||||+++....++|+|++.+++.+|++++|+++. .++|..||....|. +..+++++
T Consensus       403 iVLLKN~~~~LPL~~~~~~~IaViGp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~A~  482 (779)
T PLN03080        403 IVLLKNDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAI  482 (779)
T ss_pred             EEEEecCCCCCCCCCCCCCEEEEECCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcceeccCccccccCchhhHHHHH
Confidence            99999999999999765679999999999988888889999999999999999875 57799998655543 45688899


Q ss_pred             HHhhhCCeeEEecCCCCccccccCCCCCCCCCHHHHHHHHHHHhhCCCCEEEEEecCCeeecccccCCCCCcEEEEcCCC
Q 047621          440 KAAASADATVLVMGADQSIEAESHDRLDLLLPGQQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYP  519 (550)
Q Consensus       440 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~~Q~~li~~v~~~~~~pvVvVl~~g~P~dl~~~~~~~~v~ail~a~~p  519 (550)
                      +++++||+|||++|.+...++|+.||.++.||+.|++||++|++++++|||||+++|+|++++|+.++++++||||+|||
T Consensus       483 ~~A~~aD~vIv~~G~~~~~e~E~~Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv~l~~~~~~~~v~AIl~~~yp  562 (779)
T PLN03080        483 AIAKRADFVVVVAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYP  562 (779)
T ss_pred             HHhccCCEEEEEeCCCccccccCCCcccccCCccHHHHHHHHHhhcCCCEEEEEeCCceeeccchhccCCCCeEEEccCC
Confidence            99999999999999999899999999999999999999999998777899999999999999999777899999999999


Q ss_pred             ChhHHHHHHHHhcCCCCCCccCccccCCCCC
Q 047621          520 GQAGGAAIADVCFGRYNPSGRLPMTWYPQSY  550 (550)
Q Consensus       520 G~~gg~AiadVL~G~~nPsGkLPvT~~~~~~  550 (550)
                      ||++|+|+||||||++|||||||+|||+++|
T Consensus       563 GqegG~AiAdvLfG~vnPsGkLPvT~~p~~~  593 (779)
T PLN03080        563 GEVGGQALAEIIFGDYNPGGRLPMTWYPESF  593 (779)
T ss_pred             cccchhhhHHHHcCCCCCCCcCeeeeccccc
Confidence            9999999999999999999999999987764

>PRK15098 beta-D-glucoside glucohydrolase; Provisional Back     alignment and domain information
>COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK05337 beta-hexosaminidase; Provisional Back     alignment and domain information
>PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query550
4i3g_A 829 Crystal Structure Of Desr, A Beta-glucosidase From 2e-18
1ex1_A605 Beta-D-Glucan Exohydrolase From Barley Length = 605 2e-17
1lq2_A602 Crystal Structure Of Barley Beta-D-Glucan Glucohydr 2e-17
3usz_A 822 Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc 1e-16
3rrx_A 822 Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet 1e-16
3ac0_A 845 Crystal Structure Of Beta-Glucosidase From Kluyvero 1e-14
3abz_A 845 Crystal Structure Of Se-Met Labeled Beta-Glucosidas 3e-13
2x40_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 1e-12
2x42_A 721 Structure Of Beta-Glucosidase 3b From Thermotoga Ne 1e-12
3zyz_A 713 Crystal Structure Of A Glycoside Hydrolase Family 3 4e-10
4i8d_A 714 Crystal Structure Of Beta-D-Glucoside Glucohydrolas 5e-10
>pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 Back     alignment and structure 
Iteration: 1

 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 166/413 (40%), Gaps = 97/413 (23%)
Query: 63  RVGDLVKRLTLQEKITFL----------VDSAGSVSRLGIPKYEWWSEALHGVSYVGPGT 112
           R  +LV ++TL EKI+F+          V     V RLGIP+    ++  +G+  VG   
Sbjct: 53  RAAELVAQMTLDEKISFVHWALDPDRQNVGYLPGVPRLGIPELRA-ADGPNGIRLVGQT- 110
Query: 113 HFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTFWSPNINIFR 172
                   AT+ P  +  A++F+ ++  + GKV+  + RA+    + G     P +N  R
Sbjct: 111 --------ATALPAPVALASTFDDTMADSYGKVMGRDGRALNQDMVLG-----PMMNNIR 157
Query: 173 DPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGT 232
            P  GR  ET  EDPL++S+ A   +KG+Q           +    KH+ A + +N    
Sbjct: 158 VPHGGRNYETFSEDPLVSSRTAVAQIKGIQGAG--------LMTTAKHFAANNQEN---- 205
Query: 233 DRYHFNAMV-IYTYYLIKFKYIVS--------------------DCDSVDVLYN------ 265
           +R+  NA V   T   I+F    +                     C + ++L N      
Sbjct: 206 NRFSVNANVDEQTLREIEFPAFEASSKAGAASFMCAYNGLNGKPSCGNDELLNNVLRTQW 265
Query: 266 ------SQHYTKTPEEAAAKSILAGLDLNCG----------------SFLGKHTEAAVKA 303
                    +  TP      +I  GLD   G                 F G+  + AV  
Sbjct: 266 GFQGWVMSDWLATP---GTDAITKGLDQEMGVELPGDVPKGEPSPPAKFFGEALKTAVLN 322
Query: 304 GLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIV 363
           G V E+A+  +       + + G     P+ +P      +D      Q ++   A  G V
Sbjct: 323 GTVPEAAVTRSAERIVGQMEKFGLLLATPAPRPE-----RDKA--GAQAVSRKVAENGAV 375
Query: 364 LLKNTAGSLPLSPTAIKNLAVIGPNANVTK-TMIGNYEGTPCKYTTPLQGLAA 415
           LL+N   +LPL+  A K++AVIGP A   K T +G+    P     PL  + A
Sbjct: 376 LLRNEGQALPLAGDAGKSIAVIGPTAVDPKVTGLGSAHVVPDSAAAPLDTIKA 428
>pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 Back     alignment and structure
>pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 Back     alignment and structure
>pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 Back     alignment and structure
>pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 Back     alignment and structure
>pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 Back     alignment and structure
>pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 Back     alignment and structure
>pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 Back     alignment and structure
>pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 Back     alignment and structure
>pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query550
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 1e-105
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 1e-102
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 4e-94
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 4e-70
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 6e-30
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 1e-24
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 4e-10
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 Back     alignment and structure
 Score =  330 bits (849), Expect = e-105
 Identities = 125/596 (20%), Positives = 213/596 (35%), Gaps = 155/596 (26%)

Query: 63  RVGDLVKRLTLQEKITFL-------------------VDSAGSVSRLGIPKYEWWSEALH 103
           +V +++ +LTL+EK+  +                         V R+G+P +   ++   
Sbjct: 3   KVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPA 61

Query: 104 GVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAM-YNVGLAGLT 162
           G+       +  N     T+FP  I+ A+++N  L + +GK +  E R    +V LA   
Sbjct: 62  GLRINPTRENDENTYY-TTAFPVEIMLASTWNRELLEEVGKAMGEEVREYGVDVLLA--- 117

Query: 163 FWSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVAACCKHYT 222
              P +NI R+P  GR  E   EDP+L+ + A+ +VKG+Q           V AC KH+ 
Sbjct: 118 ---PAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQG--------VGACIKHFV 166

Query: 223 AYDLDNWKGT------DR-------YHFNAMV-----------------IYT---YYLIK 249
           A + +  +        +R         F   V                  Y     +L+K
Sbjct: 167 ANNQETNRMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYNKLNGKYCSQNEWLLK 226

Query: 250 --------FK-YIVSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCGS--------- 291
                   F+ +++SD  + D                 + + AG DL             
Sbjct: 227 KVLREEWGFEGFVMSDWYAGD--------------NPVEQLKAGNDLIMPGKAYQVNTER 272

Query: 292 -FLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQAN 350
               +    A+K G ++E  +D  + N    L+    F  +                + +
Sbjct: 273 RDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYRYSNKPD--------LEKH 324

Query: 351 QDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTM-IGNYEGTPCKYTTP 409
             +A +A  +G+VLL+N   +LPLS      +A+ G     T     G+ +  P    + 
Sbjct: 325 AKVAYEAGAEGVVLLRNE-EALPLSEN--SKIALFGTGQIETIKGGTGSGDTHPRYAISI 381

Query: 410 LQGLAAV---VATIYQAGCSNVQCGT-------------------------AQVDDAKKA 441
           L+G+                +                                  +  K 
Sbjct: 382 LEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKLPENFLSEKEIHKL 441

Query: 442 AASADATVLVMGADQSIEAESHDR----LDLLLPGQQQLLITEVAKVAKG---PVILIIM 494
           A   D  V+V+        E +DR     D  L   +  LI  V++        VI+++ 
Sbjct: 442 AKKNDVAVIVISRISG---EGYDRKPVKGDFYLSDDETDLIKTVSREFHEQGKKVIVLLN 498

Query: 495 SGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQSY 550
            G   ++   ++      IL V   GQ  G  +ADV  GR NPSG+LP T+ P+ Y
Sbjct: 499 IGSPVEVVSWRDLVD--GILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-PRDY 551
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query550
3abz_A 845 Beta-glucosidase I; glycoside hydrolase family3 be 100.0
1x38_A602 Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai 100.0
3zyz_A 713 Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 100.0
3rrx_A 822 EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( 100.0
2x41_A 721 Beta-glucosidase; hydrolase, TIM barrel fold, fibr 100.0
3bmx_A642 Uncharacterized lipoprotein YBBD; beta-N-hexosamin 100.0
3sql_A535 Glycosyl hydrolase family 3; structural genomics, 100.0
3tev_A351 Glycosyl hyrolase, family 3; PSI-biology, midwest 100.0
4g6c_A348 Beta-hexosaminidase 1; ssgcid, niaid, structural g 100.0
4gvf_A349 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N 100.0
2oxn_A340 Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O 100.0
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Back     alignment and structure
Probab=100.00  E-value=5.6e-95  Score=825.68  Aligned_cols=443  Identities=27%  Similarity=0.399  Sum_probs=381.0

Q ss_pred             HHHHHHHHhcCCHHHHHHhhcC----CCCccCCCCCCcccccccccccccccCCCccccCCCCCCCcCchHHHHHhhcCH
Q 047621           61 DLRVGDLVKRLTLQEKITFLVD----SAGSVSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNA  136 (550)
Q Consensus        61 ~~r~~~ll~~mTleEKv~ql~~----~~~~~~~~gip~~~~~~d~~~Gv~~~~~g~~~~~~~~~~t~fP~~~~laAt~d~  136 (550)
                      +.|+++||++||+|||++||.+    .+.+++|+|||.+ ++.|++||+.    +.++.+ ..++|.||+++++|||||+
T Consensus         3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~----~~~~~~-~~~~t~fP~~~~laat~d~   76 (845)
T 3abz_A            3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIR----GTKFFD-GVPSGCFPNGTGLASTFDR   76 (845)
T ss_dssp             CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCC----CSCSTT-CCCBCCCCCHHHHHHTCCH
T ss_pred             HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCee----eeeccC-CCCcCcCcCHHHHHhcCCH
Confidence            4589999999999999999986    3568999999999 7899999985    233321 1248999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcCCcccee-eccccccCCCCCCCccCCCCCCCHHHHHHHHHHHHHHhccCCCCCCCCceEE
Q 047621          137 SLFQAIGKVVSTEARAMYNVGLAGLTF-WSPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDGGSPNRLKVA  215 (550)
Q Consensus       137 ~l~~~~g~~~~~E~ra~~~~g~~Gi~~-~aP~vdi~r~P~~gr~~e~~geDp~lv~~~a~a~v~Glq~~~~G~~~~~~v~  215 (550)
                      +|++++|+++|+|+|++      |+|+ |+|++||+|||+|||++|+|||||+++++|+.|||+|||+.  |      |+
T Consensus        77 ~l~~~~g~~~g~E~ra~------Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~--g------V~  142 (845)
T 3abz_A           77 DLLETAGKLMAKESIAK------NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE--G------IA  142 (845)
T ss_dssp             HHHHHHHHHHHHHHHHT------TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT--T------CB
T ss_pred             HHHHHHHHHHHHHHHHc------CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC--C------ee
Confidence            99999999999999999      8888 99999999999999999999999999999999999999998  8      99


Q ss_pred             EeecccccccCCCCC-------------Ccccccchhhhh--------ccccc--------------------cce-EEE
Q 047621          216 ACCKHYTAYDLDNWK-------------GTDRYHFNAMVI--------YTYYL--------------------IKF-KYI  253 (550)
Q Consensus       216 a~~KHFpg~~~~~~~-------------~~~~~~f~a~v~--------~syn~--------------------Lgf-G~v  253 (550)
                      +|+||||||+++..+             +.+..||+++|.        ||||+                    ||| |+|
T Consensus       143 a~~KHFpg~g~e~~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ll~~lLR~e~GF~G~V  222 (845)
T 3abz_A          143 ATVKHFVCNDLEDQRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKKLLIDILRDEWKWDGML  222 (845)
T ss_dssp             CEEEEETTCCCCTTTTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEE
T ss_pred             EEeeccccCCcccCCccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHHHHHHHHhhccCCCeEE
Confidence            999999999876422             235679998873        78876                    699 999


Q ss_pred             EcCcchhHHhhhcCcccCCHHHHHHHHHHhccCCCCc-c--hh-HHHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHhC--
Q 047621          254 VSDCDSVDVLYNSQHYTKTPEEAAAKSILAGLDLNCG-S--FL-GKHTEAAVKAGL-VNESAIDHAISNNFATLMRLG--  326 (550)
Q Consensus       254 ~sD~~~m~~~~~~~~~~~~~~~a~~~ai~AG~Dl~~~-~--~~-~~~l~~av~~g~-i~~~~ld~a~~ril~~k~~~g--  326 (550)
                      ||||++|.              ++++|++||+||+|+ .  +. .+.|.++|++|+ +++++||+|++|||++|+++|  
T Consensus       223 vSD~~~~~--------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l  288 (845)
T 3abz_A          223 MSDWFGTY--------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDVDDRVRQVLKMIKFVVDN  288 (845)
T ss_dssp             ECCTTCCC--------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EcccccHH--------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHHHHHHHHHHHHHHHhCCc
Confidence            99998763              247899999999996 2  22 348999999999 999999999999999999999  


Q ss_pred             --CCCCCCCCCCCCCCCCccccchHHHHHHHHHHHhcchhcccCCCCCCCCCCCCCeEEEEcCCCcccccccccccC-CC
Q 047621          327 --FFDGHPSKQPYGQLGPKDVCTQANQDLALDAARQGIVLLKNTAGSLPLSPTAIKNLAVIGPNANVTKTMIGNYEG-TP  403 (550)
Q Consensus       327 --lf~~~p~~~~~~~~~~~~v~~~~h~~la~eaA~~sivLLKN~~~~LPL~~~~~~kVaviG~~a~~~~~~~G~~~g-~~  403 (550)
                        +|++ |.    .......+++++|+++++++|++|||||||++++|||++  .+||+||||+++....++|+++. .+
T Consensus       289 ~~~~~~-p~----~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~  361 (845)
T 3abz_A          289 LEKTGI-VE----NGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAKAKTSSGGGSASMNS  361 (845)
T ss_dssp             HHHHCC-CT----TCCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTSCCCCSCBSTTCCCB
T ss_pred             cccccC-Cc----cCccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcchhhccCCCccCccc
Confidence              9984 32    222223478999999999999999999999999999986  46999999999988766666654 57


Q ss_pred             CccCChHhhhccce--eEEEecCCCCc------------------------------------c----------------
Q 047621          404 CKYTTPLQGLAAVV--ATIYQAGCSNV------------------------------------Q----------------  429 (550)
Q Consensus       404 ~~~~t~~~~l~~~~--~~~~~~g~~~~------------------------------------~----------------  429 (550)
                      .+.+||++||++++  .+.|..||...                                    .                
T Consensus       362 ~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  441 (845)
T 3abz_A          362 YYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSN  441 (845)
T ss_dssp             SCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCTTCCCSEEEEECSSE
T ss_pred             CCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCcccccceeeeeccccc
Confidence            78899999998763  35555554200                                    0                


Q ss_pred             --------------------------------------------------------------------------------
Q 047621          430 --------------------------------------------------------------------------------  429 (550)
Q Consensus       430 --------------------------------------------------------------------------------  429 (550)
                                                                                                      
T Consensus       442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l  521 (845)
T 3abz_A          442 VHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFCFGAGTKERTKKLTL  521 (845)
T ss_dssp             EECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEE
T ss_pred             eeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccccccCcccceeEEEe
Confidence                                                                                            


Q ss_pred             -----------C-------------------------C-chhHHHHHHHhhhCCeeEEecCCCCccccccCCCCCCCCCH
Q 047621          430 -----------C-------------------------G-TAQVDDAKKAAASADATVLVMGADQSIEAESHDRLDLLLPG  472 (550)
Q Consensus       430 -----------~-------------------------~-~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~Lp~  472 (550)
                                 +                         + +..+++|+++|++||++||++|.+...|+||.||.++.||+
T Consensus       522 ~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~  601 (845)
T 3abz_A          522 KKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEWETEGYDRENMDLPK  601 (845)
T ss_dssp             CTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCT
T ss_pred             cCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCccccccCCcccccCCH
Confidence                       0                         0 12367788999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhCCCCEEEEEecCCeeecccccCCCCCcEEEEcCCCChhHHHHHHHHhcCCCCCCccCccccCCC
Q 047621          473 QQQLLITEVAKVAKGPVILIIMSGGGFDISFAKNDPKITSILWVGYPGQAGGAAIADVCFGRYNPSGRLPMTWYPQ  548 (550)
Q Consensus       473 ~Q~~li~~v~~~~~~pvVvVl~~g~P~dl~~~~~~~~v~ail~a~~pG~~gg~AiadVL~G~~nPsGkLPvT~~~~  548 (550)
                      .|++||++|++++ +|+|||+++|+|++|+|++   +++|||++|||||++|+||||||||++|||||||+|||++
T Consensus       602 ~Q~~LI~aV~a~~-~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPSGkLP~T~p~~  673 (845)
T 3abz_A          602 RTNELVRAVLKAN-PNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPNGKLSLSWPFK  673 (845)
T ss_dssp             THHHHHHHHHHHC-SCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCCCCCSSCBCSS
T ss_pred             HHHHHHHHHHHhC-CCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCCCCCceeeeCc
Confidence            9999999999864 6899999999999999883   7999999999999999999999999999999999999865
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Back     alignment and structure
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* Back     alignment and structure
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Back     alignment and structure
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Back     alignment and structure
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Back     alignment and structure
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Back     alignment and structure
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* Back     alignment and structure
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* Back     alignment and structure
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 550
d1x38a1388 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te 1e-33
d1x38a2214 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, 4e-23
d1tr9a_330 c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol 1e-04
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

 Score =  129 bits (325), Expect = 1e-33
 Identities = 88/402 (21%), Positives = 134/402 (33%), Gaps = 113/402 (28%)

Query: 53  FCNTSLGIDLRVGDLVKRLTLQEKI---------------------TFLVDSAGSVSRLG 91
           + + +  ++ RV DL+ R+TL EKI                       L+   GSV R G
Sbjct: 5   YKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKG 64

Query: 92  IPKYEWWS------EALHGVSYVGPGTHFSNVVPG------ATSFPQVILTAASFNASLF 139
               EW        +A        P  +  + V G      AT FP  +   A+ +  L 
Sbjct: 65  ATAKEWQDMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLV 124

Query: 140 QAIGKVVSTEARAMYNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPLLASKY------ 193
           + IG+  + E RA           ++P I + RDPRWGR  E+  ED  +          
Sbjct: 125 KRIGEATALEVRATGI-----QYAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIPG 179

Query: 194 -----ATGYVKGLQQTDGGSPNRLKVAACCKHYTAYDLDNWKGTDRYHFNAMVIYTYYL- 247
                   +  G+    G    + KVAAC KH+      +    D  + N  +I    L 
Sbjct: 180 LQGDVPKDFTSGMPFVAG----KNKVAACAKHFVG----DGGTVDGINENNTIINREGLM 231

Query: 248 --------------------------------------------IKFKYIVSDCDSVDVL 263
                                                       +KFK  V   D   + 
Sbjct: 232 NIHMPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVI-SDWEGID 290

Query: 264 YNSQHYTKTPEEAAAKSILAGLDL----NCGSFLGKHTEAAVKAGLVNESAIDHAISNNF 319
             +         +   SILAGLD+    N            V  G++  S ID A++   
Sbjct: 291 RITTPAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRIL 350

Query: 320 ATLMRLGFFDGHPSKQPYGQLG-PKDVCTQANQDLALDAARQ 360
                +G F+      PY      + +  Q ++DLA +AAR+
Sbjct: 351 RVKFTMGLFE-----NPYADPAMAEQLGKQEHRDLAREAARK 387
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 Back     information, alignment and structure
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query550
d1x38a1388 Beta-D-glucan exohydrolase, N-terminal domain {Bar 100.0
d1tr9a_330 Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 100.0
d1x38a2214 Beta-D-glucan exohydrolase, C-terminal domain {Bar 99.96
>d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: NagZ-like
domain: Beta-D-glucan exohydrolase, N-terminal domain
species: Barley (Hordeum vulgare) [TaxId: 4513]

Probab=100.00  E-value=1.7e-59  Score=494.02  Aligned_cols=287  Identities=30%  Similarity=0.464  Sum_probs=236.9

Q ss_pred             CC-cCCCCCCHHHHHHHHHhcCCHHHHHHhhcCC---------------------CCc----------------------
Q 047621           51 LG-FCNTSLGIDLRVGDLVKRLTLQEKITFLVDS---------------------AGS----------------------   86 (550)
Q Consensus        51 ~~-~~~~~~~~~~r~~~ll~~mTleEKv~ql~~~---------------------~~~----------------------   86 (550)
                      +| |+||++|+++||+|||++||+||||+||++.                     ..+                      
T Consensus         2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~lq~~~   81 (388)
T d1x38a1           2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKAC   81 (388)
T ss_dssp             CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHHHHHHHHHHHH
Confidence            56 9999999999999999999999999999631                     011                      


Q ss_pred             -cCCCCCCcccccccccccccccCCCccccCCCCCCCcCchHHHHHhhcCHHHHHHHHHHHHHHHHHhhhcCCcccee-e
Q 047621           87 -VSRLGIPKYEWWSEALHGVSYVGPGTHFSNVVPGATSFPQVILTAASFNASLFQAIGKVVSTEARAMYNVGLAGLTF-W  164 (550)
Q Consensus        87 -~~~~gip~~~~~~d~~~Gv~~~~~g~~~~~~~~~~t~fP~~~~laAt~d~~l~~~~g~~~~~E~ra~~~~g~~Gi~~-~  164 (550)
                       ..++|||.+ +..|.++|+...          .+.|.||+++++|||||+++++++|+++|+|+|++      |+|+ |
T Consensus        82 ~~~~~giPll-i~~D~e~G~~~~----------~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~------Gin~~~  144 (388)
T d1x38a1          82 MSTRLGIPMI-YGIDAVHGQNNV----------YGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT------GIQYAF  144 (388)
T ss_dssp             HTSSSCCCCE-EEECCSSSSTTS----------TTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT------TCCEEC
T ss_pred             HhccCCCCce-eecccccCcccc----------cccccchhhhhccccCCHHHHHHHHHHhhHHHHhc------CCcccc
Confidence             246688888 688888886421          25789999999999999999999999999999999      8888 9


Q ss_pred             ccccccCCCCCCCccCCCCCCCHHHHHHHHHHHHHHhccCCC-----CC---CCCceEEEeecccccccCCCCCC-----
Q 047621          165 SPNINIFRDPRWGRGQETPGEDPLLASKYATGYVKGLQQTDG-----GS---PNRLKVAACCKHYTAYDLDNWKG-----  231 (550)
Q Consensus       165 aP~vdi~r~P~~gr~~e~~geDp~lv~~~a~a~v~Glq~~~~-----G~---~~~~~v~a~~KHFpg~~~~~~~~-----  231 (550)
                      +|++||.|||+|||++|+|||||++++.|+. +|.++|+...     |-   .+..+|++|+|||||||.++.+.     
T Consensus       145 aPv~Dv~~~p~~gr~~et~geDp~l~~~~~~-~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~~~~~~~~  223 (388)
T d1x38a1         145 APCIAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVDGINENNT  223 (388)
T ss_dssp             CCBCCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGGGCTTCEE
T ss_pred             CCcccccccccccccccCccCCHHHHHHHHh-hhhhhhchhhhhhcccccccccccCcceeeeeeecCCccccCcccccc
Confidence            9999999999999999999999999999964 7888876420     00   01335999999999998764322     


Q ss_pred             ---------cccccchhhhh-------ccccc--------------------cce-EEEEcCcchhHHhhhcCcccCCHH
Q 047621          232 ---------TDRYHFNAMVI-------YTYYL--------------------IKF-KYIVSDCDSVDVLYNSQHYTKTPE  274 (550)
Q Consensus       232 ---------~~~~~f~a~v~-------~syn~--------------------Lgf-G~v~sD~~~m~~~~~~~~~~~~~~  274 (550)
                               .+..||+++|.       |+||.                    ||| |+|||||++|..+..  ++..+..
T Consensus       224 ~i~~~~l~~~~l~pf~~~i~~g~~~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~--~~~~~~~  301 (388)
T d1x38a1         224 IINREGLMNIHMPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT--PAGSDYS  301 (388)
T ss_dssp             CCCHHHHHHHTSHHHHHHHHTTCCEEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSS--STTTTHH
T ss_pred             chhHHHHHHHhhhhhHHHHhhccccccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhcccccc--ccCCcHH
Confidence                     23457888776       66665                    699 999999999999864  3345677


Q ss_pred             HHHHHHHHhccCCCCcc----hhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCccccchHH
Q 047621          275 EAAAKSILAGLDLNCGS----FLGKHTEAAVKAGLVNESAIDHAISNNFATLMRLGFFDGHPSKQPYGQLGPKDVCTQAN  350 (550)
Q Consensus       275 ~a~~~ai~AG~Dl~~~~----~~~~~l~~av~~g~i~~~~ld~a~~ril~~k~~~glf~~~p~~~~~~~~~~~~v~~~~h  350 (550)
                      ++++.+++||+||+|.+    .+.+.|.++|++|+|+++|||+||+|||++|+++|||| +|...|.   ....+++++|
T Consensus       302 ~~~~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd-~p~~~~~---~~~~i~~~~h  377 (388)
T d1x38a1         302 YSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADPA---MAEQLGKQEH  377 (388)
T ss_dssp             HHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCGG---GGGGTTCHHH
T ss_pred             HHHHHHHhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCChh---hhhhcCCHHH
Confidence            88999999999999853    46688999999999999999999999999999999999 4432221   1346899999


Q ss_pred             HHHHHHHHHhc
Q 047621          351 QDLALDAARQG  361 (550)
Q Consensus       351 ~~la~eaA~~s  361 (550)
                      +++|+|+|+||
T Consensus       378 ~~~a~~aA~~S  388 (388)
T d1x38a1         378 RDLAREAARKS  388 (388)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHhcC
Confidence            99999999997
>d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Back     information, alignment and structure