Citrus Sinensis ID: 047628
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 327 | 2.2.26 [Sep-21-2011] | |||||||
| Q9SK66 | 402 | NADH dehydrogenase [ubiqu | yes | no | 0.984 | 0.800 | 0.767 | 1e-144 | |
| Q559Z0 | 356 | NADH dehydrogenase [ubiqu | yes | no | 0.932 | 0.856 | 0.368 | 4e-55 | |
| P25284 | 375 | NADH-ubiquinone oxidoredu | N/A | no | 0.923 | 0.805 | 0.394 | 2e-51 | |
| Q5BK63 | 377 | NADH dehydrogenase [ubiqu | yes | no | 0.932 | 0.809 | 0.391 | 8e-50 | |
| P34943 | 380 | NADH dehydrogenase [ubiqu | yes | no | 0.700 | 0.602 | 0.450 | 2e-48 | |
| Q0MQB4 | 377 | NADH dehydrogenase [ubiqu | yes | no | 0.700 | 0.607 | 0.442 | 3e-47 | |
| P0CB82 | 377 | NADH dehydrogenase [ubiqu | N/A | no | 0.700 | 0.607 | 0.442 | 6e-47 | |
| P0CB81 | 377 | NADH dehydrogenase [ubiqu | yes | no | 0.700 | 0.607 | 0.442 | 6e-47 | |
| Q0MQB3 | 377 | NADH dehydrogenase [ubiqu | N/A | no | 0.700 | 0.607 | 0.437 | 8e-47 | |
| Q16795 | 377 | NADH dehydrogenase [ubiqu | yes | no | 0.700 | 0.607 | 0.437 | 1e-46 |
| >sp|Q9SK66|NDUA9_ARATH NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Arabidopsis thaliana GN=At2g20360 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 247/322 (76%), Positives = 284/322 (88%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRG ED PRHLKLMGDLGQ+VPMKF+PR
Sbjct: 67 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVPMKFDPR 126
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+++IKA MAKANVVINLIGREYETRN+SFED NH +AE++A +AKEHGGIMR+IQ+SCL
Sbjct: 127 DEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKEHGGIMRYIQVSCL 186
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ KAAAEEAVL LP ATIMRPA MIGTEDR+LN W+ FVKK+ F PL
Sbjct: 187 GASVSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTEDRILNPWSMFVKKYGFLPLI 246
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G+T+ QPVYVVDVAAA+ AALKDDG+SMGK YELGGPD+FT HELAE+MYD IRE+P
Sbjct: 247 GGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYELGGPDVFTTHELAEIMYDMIREWPR 306
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVK+PFP+AKA+A PR+ ++ KVPFPLP P +FNLD+INA T+DT+VSDNAL FQDL +V
Sbjct: 307 YVKLPFPIAKAMAAPRDFMVNKVPFPLPSPQIFNLDQINALTTDTLVSDNALKFQDLDLV 366
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP F
Sbjct: 367 PHKLKGYPVEFLIQYRKGGPNF 388
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q559Z0|NDUA9_DICDI NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Dictyostelium discoideum GN=ndufa9 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (547), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 193/320 (60%), Gaps = 15/320 (4%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNP 64
+G++ATVFG TGF GRY+VQ LA+ G QV+VP+R CED+ R LK++G+LGQI+P++F+
Sbjct: 38 TGLVATVFGATGFTGRYLVQLLARTGIQVVVPYR-CEDEGFRDLKVLGELGQIIPVRFDI 96
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD +I+ ++ +N+VIN+ GR+YETRN+S +D+N A RIA ++K + ++I +S
Sbjct: 97 RDSESIERAISHSNIVINMAGRDYETRNFSLDDINVHAASRIADLSK---NVEKYIHVST 153
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L AS SPS +KA E+ +P T++RP+ + G ED+ +NKW++ + + F P
Sbjct: 154 LRASEDSPSHFSRSKAIGEKLTREIIPNCTVVRPSIIFGDEDKFINKWSKVSQNWPFIPR 213
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+ + +IQP++ D+A+ + + L+ GTS GK+YE G ++FT E +++ D +Y
Sbjct: 214 Y-NQQHKIQPLHCYDLASGILSILETPGTS-GKVYEFAGDEVFTWDEFLDMIIDGTAQYS 271
Query: 245 HYVKVPFPVAKA-VAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303
K+ PV+ + E LL++ R F D+I+ + D + ALT +DL
Sbjct: 272 ---KLNIPVSNDFMKFISEHLLER----FARNPNFIKDQIDYHNQDMTTTVGALTLKDLN 324
Query: 304 IVPHKLKGYPTEYLIWYRKG 323
+ ++ YR G
Sbjct: 325 VTTTPIQEKLIRLSRMYRPG 344
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Dictyostelium discoideum (taxid: 44689) |
| >sp|P25284|NDUA9_NEUCR NADH-ubiquinone oxidoreductase 40 kDa subunit, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-40 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/319 (39%), Positives = 185/319 (57%), Gaps = 17/319 (5%)
Query: 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD 66
G ATVFG TG LGRY+V +LA+ G V++PFR E + RHLK+ GDLG++V ++F+ R+
Sbjct: 51 GHTATVFGATGQLGRYIVNRLARQGCTVVIPFRD-EYNKRHLKVTGDLGKVVMIEFDLRN 109
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+I+ ++ ++VV NLIGR+Y T+N+SFEDV+ AERIA ++ + RFI +S
Sbjct: 110 TQSIEESVRHSDVVYNLIGRDYPTKNFSFEDVHIEGAERIAEAVAKY-DVDRFIHVSSYN 168
Query: 127 ASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFG 186
A +S F+TKA E+ V P TI+RPA M G EDRLL+K A VK L
Sbjct: 169 ADPNSECEFFATKARGEQVVRSIFPETTIVRPAPMFGFEDRLLHKLAS-VKNI----LTS 223
Query: 187 DG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
+G + PV+V+DV A+ L DD T+ + +EL GP +T E++E++ I +
Sbjct: 224 NGMQEKYNPVHVIDVGQALEQMLWDDNTA-SETFELYGPKTYTTAEISEMVDREIYKRRR 282
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
+V VP + K +A +L K + +P + + DEI D ++ A TF+DLGI
Sbjct: 283 HVNVPKKILKPIAG---VLNKALWWP-----IMSADEIEREFHDQVIDPEAKTFKDLGIE 334
Query: 306 PHKLKGYPTEYLIWYRKGG 324
P + + YL YR
Sbjct: 335 PADIANFTYHYLQSYRSNA 353
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110) |
| >sp|Q5BK63|NDUA9_RAT NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Rattus norvegicus GN=Ndufa9 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 197 bits (501), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 124/317 (39%), Positives = 182/317 (57%), Gaps = 12/317 (3%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG++ATVFG TGFLGRYVV L +MGSQV++P+R D HL+LMGDLGQ++ ++++ R
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDIYDTMHLRLMGDLGQLIFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGRE+ETRN+ FEDV + IA +KE G+ RFI +S L
Sbjct: 112 DKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS S ++ +KA E+ V P A I+RP+ M G EDR LN +A + + F PL
Sbjct: 171 NASMKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNHFANY-RWFLAVPLV 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G T QPVYV DV+ + A K+ ++GK + GP+ + + L + ++
Sbjct: 230 SLGFKTVKQPVYVADVSKGIANATKNPD-AIGKTFAFTGPNRYLLFHLVKYIFGMT---- 284
Query: 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
H +P+P+ + V L PF P ++ I + SD + +D +DLG+
Sbjct: 285 HRTFIPYPLPRFVYSWIGRLFGLSPFE-PWTTKDKVERI--HISDVMATDLP-GLEDLGV 340
Query: 305 VPHKLKGYPTEYLIWYR 321
P L+ E L +R
Sbjct: 341 QPTPLELKSIEVLRRHR 357
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Rattus norvegicus (taxid: 10116) |
| >sp|P34943|NDUA9_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Bos taurus GN=NDUFA9 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 148/233 (63%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV+VP R D HL+ MGDLGQI+ M +N R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHRCEPYDTMHLRPMGDLGQIIFMDWNGR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + ++VVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI IS L
Sbjct: 112 DKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHISHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A S S+ +KA E+ V P ATI++PA + G EDR LN +A ++ F PL
Sbjct: 171 NADIKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRFLNYFAN-IRWFGGVPLI 229
Query: 186 GDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QPVY+VDV + A+KD + GK + GP + + +L + ++
Sbjct: 230 SLGKKTVKQPVYIVDVTKGIINAIKDP-DARGKTFAFVGPSRYLLFDLVQYVF 281
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Bos taurus (taxid: 9913) |
| >sp|Q0MQB4|NDUA9_PANTR NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pan troglodytes GN=NDUFA9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+NY FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETKNYDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Pan troglodytes (taxid: 9598) |
| >sp|P0CB82|NDUA9_PONPY NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo pygmaeus GN=NDUFA9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ETRN+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPTPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP+ + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPNRYLLFHLVKYIF 281
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Pongo pygmaeus (taxid: 9600) |
| >sp|P0CB81|NDUA9_PONAB NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Pongo abelii GN=NDUFA9 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 188 bits (477), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 103/233 (44%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDTYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ETRN+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETRNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPTPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP+ + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPNRYLLFHLVKYIF 281
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Pongo abelii (taxid: 9601) |
| >sp|Q0MQB3|NDUA9_GORGO NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFA9 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 187 bits (475), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIIKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Gorilla gorilla gorilla (taxid: 9595) |
| >sp|Q16795|NDUA9_HUMAN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial OS=Homo sapiens GN=NDUFA9 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/233 (43%), Positives = 150/233 (64%), Gaps = 4/233 (1%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV L +MGSQV++P+R + D HL+ MGDLGQ++ ++++ R
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQLLFLEWDAR 111
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++I+ + +NVVINLIGR++ET+N+ FEDV + + IA ++KE G+ +FI +S L
Sbjct: 112 DKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE-AGVEKFIHVSHL 170
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A+ S SR KA E+ V P A I++P+ + G EDR LN +A + +F PL
Sbjct: 171 NANIKSSSRYLRNKAVGEKVVRDAFPEAIIVKPSDIFGREDRFLNSFAS-MHRFGPIPLG 229
Query: 186 GDG-STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G T QPVYVVDV+ + A+KD + GK + GP + + L + ++
Sbjct: 230 SLGWKTVKQPVYVVDVSKGIVNAVKDPDAN-GKSFAFVGPSRYLLFHLVKYIF 281
|
Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. Homo sapiens (taxid: 9606) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 327 | ||||||
| 225437963 | 399 | PREDICTED: NADH dehydrogenase [ubiquinon | 0.984 | 0.807 | 0.813 | 1e-158 | |
| 356548101 | 396 | PREDICTED: NADH dehydrogenase [ubiquinon | 0.984 | 0.813 | 0.788 | 1e-153 | |
| 224132264 | 394 | predicted protein [Populus trichocarpa] | 0.984 | 0.817 | 0.804 | 1e-153 | |
| 255645431 | 396 | unknown [Glycine max] | 0.984 | 0.813 | 0.785 | 1e-152 | |
| 217072722 | 396 | unknown [Medicago truncatula] gi|3884999 | 0.984 | 0.813 | 0.770 | 1e-151 | |
| 118485658 | 399 | unknown [Populus trichocarpa] | 0.984 | 0.807 | 0.782 | 1e-150 | |
| 224065531 | 399 | predicted protein [Populus trichocarpa] | 0.984 | 0.807 | 0.782 | 1e-150 | |
| 388520273 | 396 | unknown [Lotus japonicus] | 0.984 | 0.813 | 0.760 | 1e-149 | |
| 242063496 | 408 | hypothetical protein SORBIDRAFT_04g03720 | 0.984 | 0.789 | 0.757 | 1e-149 | |
| 255571168 | 394 | NADH-ubiquinone oxidoreductase 39 kD sub | 0.984 | 0.817 | 0.804 | 1e-148 |
| >gi|225437963|ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial [Vitis vinifera] gi|297744229|emb|CBI37199.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 262/322 (81%), Positives = 294/322 (91%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+A VFG TGFLGRYVVQQLAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 64 SGIVAVVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVV+NLIGREYETRNYSFE+VNH MAE++A I+KEHGGIMRFIQ+SCL
Sbjct: 124 DENSIKAVMAKANVVLNLIGREYETRNYSFEEVNHHMAEQLAMISKEHGGIMRFIQVSCL 183
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ KAAAEEAVLRELP ATIMRPA MIGTEDR+LN+WAQF KK+ F PL+
Sbjct: 184 GASPSSPSRMLMAKAAAEEAVLRELPEATIMRPAVMIGTEDRILNRWAQFAKKYGFLPLY 243
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+ QPVYV+DVAAA+ AALKDDGTSMGK+YELGGP+IFT+HELA +MYDTIRE+P
Sbjct: 244 GDGSTKFQPVYVIDVAAAIMAALKDDGTSMGKVYELGGPEIFTMHELAAVMYDTIREWPR 303
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+ +PREILL KVPFPLP PGLFNLD INA+TSDT+VS+NALTF DLGIV
Sbjct: 304 YVKVPFPIAKAMTLPREILLNKVPFPLPTPGLFNLDLINAFTSDTVVSENALTFDDLGIV 363
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+L+ YRKGGP+F
Sbjct: 364 PHKLKGYPIEFLLSYRKGGPQF 385
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|356548101|ref|XP_003542442.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 547 bits (1409), Expect = e-153, Method: Compositional matrix adjust.
Identities = 254/322 (78%), Positives = 294/322 (91%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGIIATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED+PRHLKLMGDLGQIVPMK+NPR
Sbjct: 61 SGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKYNPR 120
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++++KA MAKANVVINLIGR+YETRNYSFE+V++ MAE++A I+KEHGGI+RFIQ+SCL
Sbjct: 121 DESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQVSCL 180
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ TK+AAEE +LRELP ATI++PA MIGTEDR+LN WA F KK+ F PLF
Sbjct: 181 GASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFLPLF 240
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYV+DVAAA+T+ LKDDGTSMGKIYELGGP+IFTVHELA++M+DTIRE+P
Sbjct: 241 GDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIREWPR 300
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PREILL KVPFPLP P + NLD+I A T+DT+VS+NALTF DLGIV
Sbjct: 301 YVKVPFPIAKALATPREILLNKVPFPLPVPEILNLDKIQALTTDTVVSENALTFNDLGIV 360
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 361 PHKLKGYPIEFLISYRKGGPQF 382
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|224132264|ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|222862069|gb|EEE99611.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust.
Identities = 259/322 (80%), Positives = 293/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG +DDPRHLKLMGDLGQIVPMK+NPR
Sbjct: 59 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSDDDPRHLKLMGDLGQIVPMKYNPR 118
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVVINLIGR+YETRNYSFE++NH MA ++A I+KEHGGIMRFIQ+SCL
Sbjct: 119 DENSIKAVMAKANVVINLIGRDYETRNYSFEELNHAMAGQLAMISKEHGGIMRFIQVSCL 178
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EEAVLRE+P AT+M+PA MIGTEDR+LN+WA F KK++F PL
Sbjct: 179 GASASSPSRLLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFTKKYSFLPLI 238
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYVVD+AAA+ AALKDDGTSMGK+YELGGP+IFTVHELAELMYD IRE+P
Sbjct: 239 GDGSTKIQPVYVVDIAAAIIAALKDDGTSMGKVYELGGPEIFTVHELAELMYDVIREWPR 298
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA A PREILL KVPFPLP P +FNLDEIN+ T DT+VS+NALTF DLGIV
Sbjct: 299 YVKVPFPIAKAFATPREILLNKVPFPLPNPKMFNLDEINSLTMDTVVSENALTFSDLGIV 358
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 359 PHKLKGYPVEFLISYRKGGPQF 380
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255645431|gb|ACU23211.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 253/322 (78%), Positives = 293/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGIIATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED+PRHLKLMGDLGQIVPMK+NPR
Sbjct: 61 SGIIATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDNPRHLKLMGDLGQIVPMKYNPR 120
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++++KA MAKANVVINLIGR+YETRNYSFE+V++ MAE++A I+KEHGGI+RFIQ+SCL
Sbjct: 121 DESSVKAVMAKANVVINLIGRDYETRNYSFEEVHYHMAEQLAKISKEHGGILRFIQVSCL 180
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ TK+AAEE +LRELP ATI++PA MIGTEDR+LN WA F KK+ F PLF
Sbjct: 181 GASPSSPSRMLRTKSAAEEMILRELPEATILKPAVMIGTEDRILNPWAHFAKKYGFLPLF 240
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYV+DVAAA+T+ LKDDGTSMGKIYELGGP+IFTVHELA++M+DTIRE+P
Sbjct: 241 GDGSTKIQPVYVIDVAAALTSLLKDDGTSMGKIYELGGPEIFTVHELADVMFDTIREWPR 300
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PREILL KVPFPLP P + NLD+I A T+DT+VS+NALTF DLGIV
Sbjct: 301 YVKVPFPIAKALATPREILLNKVPFPLPVPEILNLDKIQALTTDTVVSENALTFNDLGIV 360
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLK YP E+LI YRKGGP+F
Sbjct: 361 PHKLKEYPIEFLISYRKGGPQF 382
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|217072722|gb|ACJ84721.1| unknown [Medicago truncatula] gi|388499986|gb|AFK38059.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 539 bits (1389), Expect = e-151, Method: Compositional matrix adjust.
Identities = 248/322 (77%), Positives = 290/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED PRHLKLMGDLGQIVPMKFNPR
Sbjct: 61 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQIVPMKFNPR 120
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++++KA MA+ANVVINLIGR+YETRN+S+E+V++ MAE++A I+KEHGGIMRFIQ+SCL
Sbjct: 121 DESSVKAVMARANVVINLIGRDYETRNFSYEEVHYHMAEKLAKISKEHGGIMRFIQVSCL 180
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SS SR+ KAAAEEAVLRELP ATI +PA MIGTEDR+LN+WA F KK+ F PL
Sbjct: 181 GASPSSSSRMLRCKAAAEEAVLRELPEATIFKPAVMIGTEDRILNRWAHFAKKYGFIPLM 240
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G+G+T+IQPVYVVDVAAA+T ALKDDGTSMGKIYELGGP+IFTVH+LAE+MYD IRE+P
Sbjct: 241 GNGNTKIQPVYVVDVAAALTTALKDDGTSMGKIYELGGPEIFTVHQLAEIMYDVIREWPR 300
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV VP P+AKA+A PRE+ L K+PFPLP+P +FNLD+I+AY +DT+VS+NALTF DLGIV
Sbjct: 301 YVNVPLPIAKALATPRELFLNKLPFPLPKPEMFNLDQIHAYAADTVVSENALTFNDLGIV 360
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 361 PHKLKGYPIEFLIQYRKGGPQF 382
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|118485658|gb|ABK94679.1| unknown [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/322 (78%), Positives = 291/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 64 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVVINLIGR++ETRNYSFE++NH M E++A I+KEHGGIMRFIQ+SCL
Sbjct: 124 DENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHGGIMRFIQVSCL 183
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EEAVLRE+P AT+M+PA MIGTEDR+LN+WA F KK++F PL
Sbjct: 184 GASASSPSRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFAKKYSFLPLI 243
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYVVDVAAA+ AALKDDG+SMGK+YELGGP+IFTVHELA+LM+D IRE+P
Sbjct: 244 GDGSTKIQPVYVVDVAAAIIAALKDDGSSMGKVYELGGPEIFTVHELADLMHDVIREWPR 303
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PR +L+ KVPFPLP P +FNLDEINA T D++VS+NALTF DLGIV
Sbjct: 304 YVKVPFPIAKALATPRAVLINKVPFPLPAPKIFNLDEINALTIDSVVSENALTFNDLGIV 363
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 364 PHKLKGYPIEFLISYRKGGPQF 385
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224065531|ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|222843569|gb|EEE81116.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 536 bits (1381), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/322 (78%), Positives = 291/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQQLAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 64 SGIVATVFGATGFLGRYVVQQLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 123
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+N+IKA MAKANVVINLIGR++ETRNYSFE++NH M E++A I+KEHGGIMRFIQ+SCL
Sbjct: 124 DENSIKAVMAKANVVINLIGRDHETRNYSFEELNHGMTEQLAMISKEHGGIMRFIQVSCL 183
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS+SSPSR+ KAA EEAVLRE+P AT+M+PA MIGTEDR+LN+WA F KK++F PL
Sbjct: 184 GASASSPSRMLRAKAAGEEAVLREMPEATVMKPAVMIGTEDRILNRWAHFAKKYSFLPLI 243
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYVVDVAAA+ AALKDDG+SMGK+YELGGP+IFTVHELA+LM+D IRE+P
Sbjct: 244 GDGSTKIQPVYVVDVAAAIIAALKDDGSSMGKVYELGGPEIFTVHELADLMHDVIREWPR 303
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PR +L+ KVPFPLP P +FNLDEINA T D++VS+NALTF DLGIV
Sbjct: 304 YVKVPFPIAKALATPRAVLINKVPFPLPAPKIFNLDEINALTIDSVVSENALTFNDLGIV 363
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP+F
Sbjct: 364 PHKLKGYPIEFLISYRKGGPQF 385
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388520273|gb|AFK48198.1| unknown [Lotus japonicus] | Back alignment and taxonomy information |
|---|
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 245/322 (76%), Positives = 291/322 (90%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQ LAKMGSQVLVPFRG ED RHLKLMGDLGQ+VPMK+NPR
Sbjct: 61 SGIVATVFGATGFLGRYVVQHLAKMGSQVLVPFRGSEDCHRHLKLMGDLGQVVPMKYNPR 120
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D++++KA MAKANVVINLIGR++ETRNYS+E V++ MA+++A I+KEHGGIMRFIQ+SCL
Sbjct: 121 DESSVKAVMAKANVVINLIGRDFETRNYSYEQVHYHMADQLARISKEHGGIMRFIQVSCL 180
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ KAAAEEA+LRELP ATI++PA MIGTEDR+LN+WA F KK++F PLF
Sbjct: 181 GASPSSPSRMLRAKAAAEEAILRELPEATILKPATMIGTEDRILNRWAHFAKKYSFLPLF 240
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST+IQPVYVVDVA A+TAALKDDGTSMGK+YELGGP+++T+HELAELMY+ IRE+P
Sbjct: 241 GDGSTKIQPVYVVDVANALTAALKDDGTSMGKVYELGGPEVYTMHELAELMYEVIREWPR 300
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PRE+L+ K+PFPLP P +FNLD+I A T+DT+VS+NALTF DLGI
Sbjct: 301 YVKVPFPIAKALASPRELLINKLPFPLPTPNIFNLDQIRALTTDTVVSENALTFNDLGIN 360
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
P KLKGYPTE+LI YRKGGP+F
Sbjct: 361 PQKLKGYPTEFLISYRKGGPQF 382
|
Source: Lotus japonicus Species: Lotus japonicus Genus: Lotus Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242063496|ref|XP_002453037.1| hypothetical protein SORBIDRAFT_04g037200 [Sorghum bicolor] gi|241932868|gb|EES06013.1| hypothetical protein SORBIDRAFT_04g037200 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 532 bits (1371), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/322 (75%), Positives = 285/322 (88%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRGCED RHLK+MGDLGQIVPMK++PR
Sbjct: 74 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGCEDSHRHLKIMGDLGQIVPMKYHPR 133
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++IKA MAK+NVVINLIGREYETRNYSFE+VNH MAE++A IAKEHGGIMRFIQ+SCL
Sbjct: 134 DVDSIKAVMAKSNVVINLIGREYETRNYSFEEVNHHMAEQLATIAKEHGGIMRFIQVSCL 193
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SS SR+ TKAA E+++L+E P ATIMRPA MIGTEDR+LN+WAQF K + F PL
Sbjct: 194 GASPSSESRLLRTKAAGEQSILKEFPEATIMRPATMIGTEDRILNRWAQFAKNWGFLPLV 253
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G GST+IQPVYV+DVAAA+ +LKDDGTSMGKIYELGGP+I+TVHELAELMY+TIRE+P
Sbjct: 254 GGGSTKIQPVYVIDVAAAIVNSLKDDGTSMGKIYELGGPEIYTVHELAELMYETIREWPR 313
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YV VP PVA+A+A PRE+LL KVPFPLP P +FNLD+INA+ D +VS++ALTF+DLGI+
Sbjct: 314 YVNVPLPVARAIASPREMLLNKVPFPLPTPSIFNLDQINAFAVDNLVSEDALTFEDLGIM 373
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
P KLKGYP E+L+ YRKGGP F
Sbjct: 374 PQKLKGYPVEFLVSYRKGGPSF 395
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255571168|ref|XP_002526534.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus communis] gi|223534095|gb|EEF35812.1| NADH-ubiquinone oxidoreductase 39 kD subunit, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 531 bits (1368), Expect = e-148, Method: Compositional matrix adjust.
Identities = 259/322 (80%), Positives = 294/322 (91%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVVQ+LAKMGSQVLVPFRG ED RHLKLMGDLGQIVPMK+NPR
Sbjct: 65 SGIVATVFGATGFLGRYVVQRLAKMGSQVLVPFRGSEDSHRHLKLMGDLGQIVPMKYNPR 124
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+ +IKA MAKANVVINLIGREYETRNYSFE+VNH MAE++A IAKEHGGIMR+IQ+SCL
Sbjct: 125 DEASIKAVMAKANVVINLIGREYETRNYSFEEVNHGMAEQLAMIAKEHGGIMRYIQVSCL 184
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
G+SSSSPSR+ KAAAEEAVLRE+P AT+M+PAAMIGTEDR+LNKWA FVKK++F PLF
Sbjct: 185 GSSSSSPSRMLRAKAAAEEAVLREIPEATVMKPAAMIGTEDRILNKWAHFVKKYSFLPLF 244
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
GDGST++QPVYVVDVAAA+ AALKDDG+SMGKIYELGGP+I TVHELAE+M+D IRE+P
Sbjct: 245 GDGSTKLQPVYVVDVAAAIIAALKDDGSSMGKIYELGGPEILTVHELAEIMFDMIREWPR 304
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
YVKVPFP+AKA+A PRE+L+ KVPFPLP P +FNLDEI A T DT+VS+NALTF DLGI+
Sbjct: 305 YVKVPFPIAKAIATPREVLINKVPFPLPTPNIFNLDEIIALTMDTVVSENALTFHDLGIM 364
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP EYLI YRKGGP+F
Sbjct: 365 PHKLKGYPVEYLISYRKGGPQF 386
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 327 | ||||||
| TAIR|locus:2039017 | 402 | AT2G20360 [Arabidopsis thalian | 0.984 | 0.800 | 0.704 | 1.7e-123 | |
| DICTYBASE|DDB_G0272266 | 356 | ndufa9 "NADH dehydrogenase [ub | 0.935 | 0.859 | 0.354 | 3.7e-48 | |
| UNIPROTKB|P34943 | 380 | NDUFA9 "NADH dehydrogenase [ub | 0.697 | 0.6 | 0.431 | 8.6e-45 | |
| RGD|1307307 | 377 | Ndufa9 "NADH dehydrogenase (ub | 0.724 | 0.628 | 0.413 | 3.7e-44 | |
| ZFIN|ZDB-GENE-050320-20 | 380 | ndufa9 "NADH dehydrogenase (ub | 0.938 | 0.807 | 0.374 | 1e-43 | |
| UNIPROTKB|Q5ZI00 | 378 | NDUFA9 "Uncharacterized protei | 0.920 | 0.796 | 0.365 | 5.7e-43 | |
| UNIPROTKB|F1SL07 | 377 | LOC100524622 "Uncharacterized | 0.697 | 0.604 | 0.431 | 5.7e-43 | |
| UNIPROTKB|E1C4Y6 | 380 | NDUFA9 "Uncharacterized protei | 0.920 | 0.792 | 0.363 | 8.4e-42 | |
| MGI|MGI:1913358 | 377 | Ndufa9 "NADH dehydrogenase (ub | 0.724 | 0.628 | 0.418 | 3.6e-41 | |
| UNIPROTKB|E2RJR2 | 377 | NDUFA9 "Uncharacterized protei | 0.697 | 0.604 | 0.405 | 2.6e-40 |
| TAIR|locus:2039017 AT2G20360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1214 (432.4 bits), Expect = 1.7e-123, P = 1.7e-123
Identities = 227/322 (70%), Positives = 260/322 (80%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRY+VQQLAKMGSQVLVPFRG ED PRHLKLMGDLGQ+VPMKF+PR
Sbjct: 67 SGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVPMKFDPR 126
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D+++IKA MAKANVVINLIGREYETRN+SFED NH +AE++A +AKEHGGIMR+IQ+SCL
Sbjct: 127 DEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKEHGGIMRYIQVSCL 186
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
GAS SSPSR+ KAAAEEAVL LP ATIMRPA MIGTEDR+LN W+ FVKK+ F PL
Sbjct: 187 GASVSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTEDRILNPWSMFVKKYGFLPLI 246
Query: 186 GDGSTRIQPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPH 245
G G+T+ QP LKDDG+SMGK YELGGPD+FT HELAE+MYD IRE+P
Sbjct: 247 GGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYELGGPDVFTTHELAEIMYDMIREWPR 306
Query: 246 YXXXXXXXXXXXXMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305
Y PR+ ++ KVPFPLP P +FNLD+INA T+DT+VSDNAL FQDL +V
Sbjct: 307 YVKLPFPIAKAMAAPRDFMVNKVPFPLPSPQIFNLDQINALTTDTLVSDNALKFQDLDLV 366
Query: 306 PHKLKGYPTEYLIWYRKGGPKF 327
PHKLKGYP E+LI YRKGGP F
Sbjct: 367 PHKLKGYPVEFLIQYRKGGPNF 388
|
|
| DICTYBASE|DDB_G0272266 ndufa9 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 113/319 (35%), Positives = 178/319 (55%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNP 64
+G++ATVFG TGF GRY+VQ LA+ G QV+VP+R CED+ R LK++G+LGQI+P++F+
Sbjct: 38 TGLVATVFGATGFTGRYLVQLLARTGIQVVVPYR-CEDEGFRDLKVLGELGQIIPVRFDI 96
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD +I+ ++ +N+VIN+ GR+YETRN+S +D+N A RIA ++K + ++I +S
Sbjct: 97 RDSESIERAISHSNIVINMAGRDYETRNFSLDDINVHAASRIADLSKN---VEKYIHVST 153
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L AS SPS +KA E+ +P T++RP+ + G ED+ +NKW++ + + F P
Sbjct: 154 LRASEDSPSHFSRSKAIGEKLTREIIPNCTVVRPSIIFGDEDKFINKWSKVSQNWPFIPR 213
Query: 185 FGDGSTRIQPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+ +IQP L+ GTS GK+YE G ++FT E +++ D +Y
Sbjct: 214 YNQ-QHKIQPLHCYDLASGILSILETPGTS-GKVYEFAGDEVFTWDEFLDMIIDGTAQYS 271
Query: 245 HYXXXXXXXXXXXXMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
E LL++ R F D+I+ + D + ALT +DL +
Sbjct: 272 KLNIPVSNDFMKFIS--EHLLER----FARNPNFIKDQIDYHNQDMTTTVGALTLKDLNV 325
Query: 305 VPHKLKGYPTEYLIWYRKG 323
++ YR G
Sbjct: 326 TTTPIQEKLIRLSRMYRPG 344
|
|
| UNIPROTKB|P34943 NDUFA9 "NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 448 (162.8 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 101/234 (43%), Positives = 142/234 (60%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNP 64
SGI+ATVFG TGFLGRYVV L +MGSQV+VP R CE D HL+ MGDLGQI+ M +N
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPHR-CEPYDTMHLRPMGDLGQIIFMDWNG 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD ++I+ + ++VVINL+GRE+ET+N+ FEDV + + IA ++KE G+ +FI IS
Sbjct: 111 RDKDSIRRAVEHSSVVINLVGREWETQNFDFEDVFVKIPQAIAQVSKE-AGVEKFIHISH 169
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A S S+ +KA E+ V P ATI++PA + G EDR LN +A ++ F PL
Sbjct: 170 LNADIKSSSKYLRSKAVGEKEVRETFPEATIIKPAEIFGREDRFLNYFAN-IRWFGGVPL 228
Query: 185 FGDGSTRI-QPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QP +KD + GK + GP + + +L + ++
Sbjct: 229 ISLGKKTVKQPVYIVDVTKGIINAIKDPD-ARGKTFAFVGPSRYLLFDLVQYVF 281
|
|
| RGD|1307307 Ndufa9 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 438 (159.2 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 101/244 (41%), Positives = 147/244 (60%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNP 64
SG++ATVFG TGFLGRYVV L +MGSQV++P+R C+ D HL+LMGDLGQ++ ++++
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYR-CDIYDTMHLRLMGDLGQLIFLEWDA 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD ++I+ + +NVVINLIGRE+ETRN+ FEDV + IA +KE G+ RFI +S
Sbjct: 111 RDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSH 169
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L AS S ++ +KA E+ V P A I+RP+ M G EDR LN +A + + F PL
Sbjct: 170 LNASMKSSAKSLRSKAVGEKEVRTVFPDAIIIRPSDMFGREDRFLNHFANY-RWFLAVPL 228
Query: 185 FGDGSTRI-QPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIRE 242
G + QP K+ ++GK + GP+ + + L + ++ T R
Sbjct: 229 VSLGFKTVKQPVYVADVSKGIANATKNPD-AIGKTFAFTGPNRYLLFHLVKYIFGMTHRT 287
Query: 243 YPHY 246
+ Y
Sbjct: 288 FIPY 291
|
|
| ZFIN|ZDB-GENE-050320-20 ndufa9 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 119/318 (37%), Positives = 173/318 (54%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SG+ ATVFG TGFLGRYVV +L +MGSQV++P+R + D +L+ MGDLGQI+ M+++PR
Sbjct: 54 SGLAATVFGATGFLGRYVVNRLGRMGSQVVIPYRCDQYDLMYLRPMGDLGQIIFMEWDPR 113
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ +I+ ++ +NVVINL+GRE+ET NY +EDV + +IA +E GI +FI +S L
Sbjct: 114 NKESIQRAISHSNVVINLVGREWETSNYKYEDVFVSIPLQIARATRE-AGIKKFIHMSHL 172
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
A SPS+ KA EEAV E P A IM+P+ + G EDR LN +A PL
Sbjct: 173 NADIRSPSKYLRNKAVGEEAVRNEFPDAIIMKPSELFGREDRFLNHFANMRWFGTAVPLI 232
Query: 186 GDGSTRI-QPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
G + QP ++D + GK Y L GP+ + +H+L E +Y ++ P
Sbjct: 233 AMGKKTVKQPVHVVDVAKAIINAIQDPEAN-GKTYALVGPNRYLLHDLVEYLY-SVAHRP 290
Query: 245 HYXXXXXXXXXXXXMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304
+ + R + PF P +D + +TSD D +DLGI
Sbjct: 291 -FMPYPLPRPLYHLVAR--FFEMNPFE-PWTTRDKVDRL--HTSDLKYPDLP-GLEDLGI 343
Query: 305 VPHKLKGYPTEYLIWYRK 322
P ++ E L +R+
Sbjct: 344 TPASIEQKAIETLRRHRR 361
|
|
| UNIPROTKB|Q5ZI00 NDUFA9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 118/323 (36%), Positives = 183/323 (56%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
SGI+ATVFG TGFLGRYVV +L ++GSQV++P+R + D +L+ MGDLGQ++ ++++ +
Sbjct: 53 SGIVATVFGATGFLGRYVVNRLGRIGSQVIIPYRCDQYDLMYLRPMGDLGQLLFLEWDCK 112
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++ + + +NVVINL+G+E+ET+N+SFED + + IA I +E G+ I IS L
Sbjct: 113 DKDSTRRAVEHSNVVINLVGKEWETKNFSFEDEFVNIPKSIAQITRE-AGVETLIHISHL 171
Query: 126 GASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
AS SPS+ +KA E+AV E P A IM+P+ M G EDR LN +A ++ F PL
Sbjct: 172 NASMKSPSKYLRSKAVGEKAVREEFPDAVIMKPSEMFGREDRFLNHYAN-MRWFGGVPLI 230
Query: 186 GDGSTRI-QPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMYDT-IREY 243
G + QP +KD GK Y L GP+ + ++++ E +Y R++
Sbjct: 231 SLGKKTVKQPVYVVDVAKAIINAVKDPDAK-GKTYALVGPNRYLLYDMIEYIYAVAFRKF 289
Query: 244 PHYXXXXXXXXXXXXMPREI--LLKKVPFPL-PRPGLFNLDEINAY-TSDTIVSDNALTF 299
Y +PR + L+ + F + P D+++ + T+D I+ D
Sbjct: 290 FPYP-----------LPRPLYHLIARF-FEISPFEPWLTRDKVDRFHTTDMILPDLP-GL 336
Query: 300 QDLGIVPHKLKGYPTEYLIWYRK 322
+DLGI P L+ E L +R+
Sbjct: 337 EDLGIQPTPLEQRAIEVLRRHRR 359
|
|
| UNIPROTKB|F1SL07 LOC100524622 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 101/234 (43%), Positives = 143/234 (61%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNP 64
SGI+ATVFG TGFLGRYVV L +MGSQV+VP+R CE D HL+ MGDLGQI+ M++N
Sbjct: 52 SGIVATVFGATGFLGRYVVNHLGRMGSQVIVPYR-CEPYDTMHLRPMGDLGQIIFMEWNG 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+D ++I+ + +NVVINL+GRE+ET+N+ FEDV + IA ++KE G+ + I IS
Sbjct: 111 KDKDSIRKVVEHSNVVINLVGREWETKNFDFEDVFVKIPHAIAQVSKE-AGVEKLIHISH 169
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A SPSR +KA E+ V P ATI++P+ + G EDR LN +A ++ F PL
Sbjct: 170 LNADIKSPSRYLRSKAVGEKEVRAAFPEATIIKPSDIFGREDRFLNYFAS-MRWFGGVPL 228
Query: 185 FGDGSTRI-QPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QP +KD GK + GP+ + + +L + ++
Sbjct: 229 ISLGKETVKQPVYIVDVSKGIINAIKDPDAK-GKTFAFVGPNRYLLFDLVQYIF 281
|
|
| UNIPROTKB|E1C4Y6 NDUFA9 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 118/325 (36%), Positives = 183/325 (56%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLA--KMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN 63
SGI+ATVFG TGFLGRYVV +L ++GSQV++P+R + D +L+ MGDLGQ++ ++++
Sbjct: 53 SGIVATVFGATGFLGRYVVNRLGLGRIGSQVIIPYRCDQYDLMYLRPMGDLGQLLFLEWD 112
Query: 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
+D ++ + + +NVVINL+G+E+ET+N+SFED + + IA I +E G+ I IS
Sbjct: 113 CKDKDSTRRAVEHSNVVINLVGKEWETKNFSFEDEFVNIPKSIAQITRE-AGVETLIHIS 171
Query: 124 CLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
L AS SPS+ +KA E+AV E P A IM+P+ M G EDR LN +A ++ F P
Sbjct: 172 HLNASMKSPSKYLRSKAVGEKAVREEFPDAVIMKPSEMFGREDRFLNHYAN-MRWFGGVP 230
Query: 184 LFGDGSTRI-QPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMYDT-IR 241
L G + QP +KD GK Y L GP+ + ++++ E +Y R
Sbjct: 231 LISLGKKTVKQPVYVVDVAKAIINAVKDPDAK-GKTYALVGPNRYLLYDMIEYIYAVAFR 289
Query: 242 EYPHYXXXXXXXXXXXXMPREI--LLKKVPFPL-PRPGLFNLDEINAY-TSDTIVSDNAL 297
++ Y +PR + L+ + F + P D+++ + T+D I+ D
Sbjct: 290 KFFPYP-----------LPRPLYHLIARF-FEISPFEPWLTRDKVDRFHTTDMILPDLP- 336
Query: 298 TFQDLGIVPHKLKGYPTEYLIWYRK 322
+DLGI P L+ E L +R+
Sbjct: 337 GLEDLGIQPTPLEQRAIEVLRRHRR 361
|
|
| MGI|MGI:1913358 Ndufa9 "NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 9" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 102/244 (41%), Positives = 146/244 (59%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNP 64
SG++ATVFG TGFLGRYVV L +MGSQV++P+R C+ D HL+LMGDLGQ+ ++++
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYR-CDVYDIMHLRLMGDLGQLTFLEWDA 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
RD ++I+ + +NVVINLIGRE+ETRN+ FEDV + IA +KE G+ RFI +S
Sbjct: 111 RDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKE-AGVERFIHVSH 169
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L AS S S+ +KA E+ V P A I+RP+ + G EDR LN +A + + F PL
Sbjct: 170 LNASMKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRFLNHFANY-RWFLAVPL 228
Query: 185 FGDGSTRI-QPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMYD-TIRE 242
G + QP KD ++GK + GP+ + + L + ++ T R
Sbjct: 229 VSLGFKTVKQPVYVADVSKGIVNATKDPD-AVGKTFAFTGPNRYLLFHLVKYIFGMTHRT 287
Query: 243 YPHY 246
+ Y
Sbjct: 288 FIPY 291
|
|
| UNIPROTKB|E2RJR2 NDUFA9 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 95/234 (40%), Positives = 141/234 (60%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNP 64
SG++ATVFG TGFLGRYVV L +MGSQV++P+R C+ D HL+ MGDLGQI+ ++++
Sbjct: 52 SGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYR-CDPYDTMHLRPMGDLGQIIFLEWDG 110
Query: 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
R+ ++I+ + +NVVINLIGRE+ET+N+ FEDV + + IA ++KE G+ +FI +S
Sbjct: 111 RNKDSIQRAVKHSNVVINLIGREWETKNFDFEDVFVKIPQAIAKVSKE-AGVEKFIHVSH 169
Query: 125 LGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
L A S SR KA E+ V P A I++P+ + G EDR LN +A + F PL
Sbjct: 170 LNADIKSSSRYLRNKAVGEKEVRDAFPEAIIIKPSDIFGREDRFLNHFAN-TRWFGGVPL 228
Query: 185 FGDGSTRI-QPXXXXXXXXXXXXXLKDDGTSMGKIYELGGPDIFTVHELAELMY 237
G + QP +KD GK + GP+ + + +L + ++
Sbjct: 229 ISLGKKTVKQPVYVVDVSKGIVNAIKDPDAK-GKSFAFVGPNRYLLFDLVQYVF 281
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q5BK63 | NDUA9_RAT | No assigned EC number | 0.3911 | 0.9327 | 0.8090 | yes | no |
| Q9SK66 | NDUA9_ARATH | No assigned EC number | 0.7670 | 0.9847 | 0.8009 | yes | no |
| Q9DC69 | NDUA9_MOUSE | No assigned EC number | 0.3943 | 0.9327 | 0.8090 | yes | no |
| Q559Z0 | NDUA9_DICDI | No assigned EC number | 0.3687 | 0.9327 | 0.8567 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.17.1 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 327 | |||
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 1e-107 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 1e-17 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 1e-16 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 4e-16 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 5e-14 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 6e-14 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 1e-11 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 1e-11 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-10 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 4e-10 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 1e-09 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 7e-09 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 2e-08 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 3e-08 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 7e-08 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 8e-08 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 1e-07 | |
| cd05250 | 214 | cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical | 2e-07 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 3e-07 | |
| COG1091 | 281 | COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [C | 1e-06 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 1e-06 | |
| pfam04321 | 284 | pfam04321, RmlD_sub_bind, RmlD substrate binding d | 2e-06 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 1e-04 | |
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 1e-04 | |
| PRK11908 | 347 | PRK11908, PRK11908, NAD-dependent epimerase/dehydr | 3e-04 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 3e-04 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 0.001 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 313 bits (804), Expect = e-107
Identities = 126/277 (45%), Positives = 174/277 (62%), Gaps = 12/277 (4%)
Query: 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
++ TVFG TGF+GRYVV +LAK GSQV+VP+R CE R L +MGDLGQ++ ++F+ RDD
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYR-CEAYARRLLVMGDLGQVLFVEFDLRDD 59
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+I+ + ++VVINL+GR YET+N+SFEDV+ ER+A AKE G + R I IS LGA
Sbjct: 60 ESIRKALEGSDVVINLVGRLYETKNFSFEDVHVEGPERLAKAAKEAG-VERLIHISALGA 118
Query: 128 SSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD 187
++SPS+ +KA EEAV P ATI+RP+ + G EDR LN++A+ + F PL G
Sbjct: 119 DANSPSKYLRSKAEGEEAVREAFPEATIVRPSVVFGREDRFLNRFAKLLAFLPFPPLIGG 178
Query: 188 GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI-REYPHY 246
G T+ QPVYV DVA A+ ALKD + GK YEL GP ++T+ EL EL+ R+
Sbjct: 179 GQTKFQPVYVGDVAEAIARALKDP-ETEGKTYELVGPKVYTLAELVELLRRLGGRKRRVL 237
Query: 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEI 283
+P +A+ +A L D++
Sbjct: 238 P-LPLWLARLIAR-------VKLLLLLPEPPLTRDQL 266
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 80.7 bits (199), Expect = 1e-17
Identities = 65/232 (28%), Positives = 97/232 (41%), Gaps = 21/232 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TGF+G VV++L G +V R +P + ++V D
Sbjct: 5 VTGATGFVGGAVVRELLARGHEVRAAVR----NPEAAAALAGGVEVV------LGDLRDP 54
Query: 72 ATMAKA--NVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129
++ V L+ + +F V R A G+ + +S LGA +
Sbjct: 55 KSLVAGAKGVDGVLLISGLLDGSDAFRAVQVTAVVRAA--EAAGAGVKHGVSLSVLGADA 112
Query: 130 SSPSRVFSTKAAAEEAVLRELPWA-TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
+SPS + KAA EA LR T +R AA + + + P+ G
Sbjct: 113 ASPSALARAKAAV-EAALRSSGIPYTTLRRAAFYLGAGAA---FIEAAEA-AGLPVIPRG 167
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
R+ P+ V DVA A+ AAL T+ G+ YEL GP+ T+ ELA + TI
Sbjct: 168 IGRLSPIAVDDVAEALAAALDAPATA-GRTYELAGPEALTLAELASGLDYTI 218
|
Length = 275 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 75.9 bits (187), Expect = 1e-16
Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 16/158 (10%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
+ G TGF+GR + ++L + G +V + R + + + + + + RD ++
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQEPVAVVEG-----DLRDLDS 55
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA-- 127
+ + +VVI+L G +TR F +V+ + AKE G+ FI IS LGA
Sbjct: 56 LSDAVQGVDVVIHLAGAPRDTR--DFCEVDVEGTRNVLEAAKEA-GVKHFIFISSLGAYG 112
Query: 128 ------SSSSPSRVFSTKAAAEEAVLRELPWATIMRPA 159
S S + KA E + TI+RP
Sbjct: 113 DLHEETEPSPSSPYLAVKAKTEAVLREASLPYTIVRPG 150
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 75.3 bits (186), Expect = 4e-16
Identities = 62/222 (27%), Positives = 92/222 (41%), Gaps = 30/222 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLG-QIVPMKFNPRDDNTI 70
V G TG +GR+VV++L G QV R DP + + G ++V + D ++
Sbjct: 4 VVGATGKVGRHVVRELLDRGYQVRALVR----DPSQAEKLEAAGAEVV--VGDLTDAESL 57
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
A + + VI+ G E V++ + AK G+ RF+ +S +GA
Sbjct: 58 AAALEGIDAVISAAG-SGGKGGPRTEAVDYDGNINLIDAAK-KAGVKRFVLVSSIGADKP 115
Query: 131 SPSR-----VFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP 183
S K AE+ LR L + TI+RP + T+D
Sbjct: 116 SHPLEALGPYLDAKRKAED-YLRASGLDY-TIVRPGGL--TDDPAGTG---------RVV 162
Query: 184 LFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
L GDG+ P+ DVA + AL GK +ELGG D
Sbjct: 163 LGGDGTRLDGPISRADVAEVLAEALDTPAAI-GKTFELGGGD 203
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 71.1 bits (174), Expect = 5e-14
Identities = 62/284 (21%), Positives = 102/284 (35%), Gaps = 44/284 (15%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G GF+G ++V++L G V D L L + + + D + +
Sbjct: 5 VTGGAGFIGSHLVERLLAAGHDVRG------LDRLRDGLDPLLSGVEFVVLDLTDRDLVD 58
Query: 72 ATMAKAN-VVINLIGR-----EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS-- 123
VI+L + + F DVN + A+ G RF+ S
Sbjct: 59 ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVK-RFVFASSV 117
Query: 124 -CLGAS--------SSSPSRVFS----TKAAAEEAVLRELPW----ATIMRPAAMIGTED 166
+ P R + +K AAE+ + I+RP + G D
Sbjct: 118 SVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGD 177
Query: 167 R-------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIY 219
+ + Q +K + GDGS VYV DVA A+ AL++ G ++
Sbjct: 178 KPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD---GGVF 234
Query: 220 ELGGPDI-FTVHELAELMYDTI-REYPHYVKVPFPVAKAVAMPR 261
+G TV ELAE + + + + P V +P + +
Sbjct: 235 NIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGK 278
|
Length = 314 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 6e-14
Identities = 74/341 (21%), Positives = 115/341 (33%), Gaps = 57/341 (16%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK------LMGDLGQIVPMKFNPR 65
V G TGFLG +V+ L G +V R D L + GDL
Sbjct: 3 VTGATGFLGSNLVRALLAQGYRVRALVRS-GSDAVLLDGLPVEVVEGDL----------T 51
Query: 66 DDNTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
D ++ A M + V +L + N + A E G+ R + S
Sbjct: 52 DAASLAAAMKGCDRVFHLAAFTSLWAKDRKELYRTNVEGTRNVLDAALEA-GVRRVVHTS 110
Query: 124 CLGASSSSPSRVFS----------------TKAAAEEAVLRE----LPWATIMRPAAMIG 163
+ A P +K AE VL L I+ P+A+ G
Sbjct: 111 SIAALGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAAEGLD-VVIVNPSAVFG 169
Query: 164 TEDRLLNKWAQFVKKFNFF----PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIY 219
D + + ++ P + G T V V DVA AA++ G G+ Y
Sbjct: 170 PGDE--GPTSTGLDVLDYLNGKLPAYPPGGTSF--VDVRDVAEGHIAAME-KGRR-GERY 223
Query: 220 ELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFN 279
LGG ++ + +L E + + P +P + KAVA E+ +P L
Sbjct: 224 ILGGENL-SFKQLFETLAEITGVKPPRRTIPPWLLKAVAALSEL----KARLTGKPPLLT 278
Query: 280 LDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWY 320
+ + ++LG P L+ + L W
Sbjct: 279 PRTA-RVLRRNYLYSSDKARRELGYSPRPLEEALRDTLAWL 318
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 1e-11
Identities = 55/253 (21%), Positives = 95/253 (37%), Gaps = 55/253 (21%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G T F+G+ +V++L G V V RG L + IV + +
Sbjct: 5 IIGGTRFIGKALVEELLAAGHDVTVFNRG----RTKPDLPEGVEHIVGDRNDRDA----- 55
Query: 72 ATMAKANVVINLIGRE-----YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ L+G E +T Y+ V ER K G + ++I IS
Sbjct: 56 --------LEELLGGEDFDVVVDTIAYTPRQV-----ERALDAFK--GRVKQYIFISSAS 100
Query: 127 ASSSSPSRVFST--------------------KAAAEEAVLRE--LPWATIMRPAAMIGT 164
+ + K AAE+ ++ P+ TI+RP + G
Sbjct: 101 VYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAAFPY-TIVRPPYIYGP 159
Query: 165 EDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222
D L + + + + GDG + +Q ++V D+A A+ A + ++G I+ +
Sbjct: 160 GDYTGRLAYFFDRLARGRPILVPGDGHSLVQFIHVKDLARALLGAAGNP-KAIGGIFNIT 218
Query: 223 GPDIFTVHELAEL 235
G + T EL E
Sbjct: 219 GDEAVTWDELLEA 231
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 1e-11
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 44/237 (18%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLG-QIVPMKFNPRDDNTI 70
V G TG LG VV+ L + V+ R +P K G ++ + DD
Sbjct: 3 VTGATGKLGTAVVELLLAKVASVVALVR----NPEKAKAFAADGVEVRQGDY---DDP-- 53
Query: 71 KATMAKA-----NVVI----NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
T+ +A +++ +L R + +N F D A + AG+ +
Sbjct: 54 -ETLERAFEGVDRLLLISPSDLEDRIQQHKN--FID-----AAKQAGVK-------HIVY 98
Query: 122 ISCLGASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
+S GA SP + A E+ L +P+ TI+RP + D LL +++
Sbjct: 99 LSASGADEDSPFLLARDHGATEKY-LEASGIPY-TILRPGWFM---DNLLEFLPSILEEG 153
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
+ GDG ++ V D+A A AAL + G GK+Y L GP+ + ELA ++
Sbjct: 154 TIYGPAGDG--KVAFVDRRDIAEAAAAALTEPGHE-GKVYNLTGPEALSYAELAAIL 207
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 2e-10
Identities = 48/234 (20%), Positives = 85/234 (36%), Gaps = 59/234 (25%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G GF+G ++V++L + G +V+V + L +V +
Sbjct: 3 VTGGAGFIGSHLVRRLLERGHEVVV--------------IDRLDVVVHL----------- 37
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS---CLGA- 127
A V + N + A++ G + RF+ S G+
Sbjct: 38 --AALVGV------PASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVYASSASVYGSP 88
Query: 128 -----SSSSPSRVFS----TKAAAEEAVLR-----ELPWATIMRPAAMIGTE-----DRL 168
+P R S +K AAE + LP I+R A + G D +
Sbjct: 89 EGLPEEEETPPRPLSPYGVSKLAAEHLLRSYGESYGLP-VVILRLANVYGPGQRPRLDGV 147
Query: 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222
+N + + + +FG G+ ++V DV A+ AL++ G +Y +G
Sbjct: 148 VNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPL-EGGGVYNIG 200
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 58.8 bits (143), Expect = 4e-10
Identities = 55/243 (22%), Positives = 96/243 (39%), Gaps = 40/243 (16%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
V G TGF+G ++V++L + G +V+V R R + + G+I + + D +
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRR-----RRSESLNT-GRIRFHEGDLTDPDA 54
Query: 70 IKATMAKA--NVVINLIGREYETRNYS----FEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
++ +A+ + VI+L + ++ F N R+ A+ G+ RF+ S
Sbjct: 55 LERLLAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRA-GVKRFVFAS 113
Query: 124 CLGASSSSPSRVFS-------------TKAAAEEAVLR-----ELPWATIMRPAAMIG-- 163
+ K AAE V L A I+R + G
Sbjct: 114 SSEVYGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLR-AVILRLFNVYGPG 172
Query: 164 ----TEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIY 219
++ + + + L GDG+ R +YV DVA A+ AL+ G+IY
Sbjct: 173 NPDPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHP--DGGEIY 230
Query: 220 ELG 222
+G
Sbjct: 231 NIG 233
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 57.7 bits (140), Expect = 1e-09
Identities = 63/252 (25%), Positives = 92/252 (36%), Gaps = 35/252 (13%)
Query: 11 TVFGTTGFLGRYVVQQLAK-MGSQVLVPFRGCEDDP-----RHLKLMGDLGQIVPMKFNP 64
VFG TG G VV+ L K G +V R DP + L G ++V +
Sbjct: 2 LVFGATGKQGGSVVRALLKDPGFKV----RALTRDPSSPAAKALAAPGV--EVVQGDLD- 54
Query: 65 RDDNTIKATMAKAN---VVIN--LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRF 119
D +++A + +V + G E E + + AK G+ F
Sbjct: 55 -DPESLEAALKGVYGVFLVTDFWEAGGEDEIA----------QGKNVVDAAKR-AGVQHF 102
Query: 120 IQISCLGASSSSPSRV--FSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
+ S + V F +KA EE + ATI+RPA +
Sbjct: 103 V-FSSVPDVEKLTLAVPHFDSKAEVEEYIRASGLPATILRPAFFMENFLTPPAPQKMEDG 161
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237
L D T++ + V D+ AV A KD GK EL G D T E+A
Sbjct: 162 TLTL-VLPLDPDTKLPMIDVADIGPAVAAIFKDPAKFNGKTIELAG-DELTPEEIAAAFS 219
Query: 238 DTIREYPHYVKV 249
+ + YV+V
Sbjct: 220 KVLGKPVTYVQV 231
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 55.4 bits (134), Expect = 7e-09
Identities = 58/241 (24%), Positives = 92/241 (38%), Gaps = 17/241 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLG-QIVPMKFNPRDDNTI 70
V G TG +G V L + G V R + G ++V + +
Sbjct: 3 VTGATGRIGSKVATTLLEAGRPVRALVR----SDERAAALAARGAEVVVGDLDDPAV--L 56
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
A +A + V L + AE A +E G + R + +S +GA
Sbjct: 57 AAALAGVDAVFFLAPPAP--TADARPGYVQA-AEAFASALREAG-VKRVVNLSSVGADPE 112
Query: 131 SPSRVFSTKAAAEEAVLRELPWATI-MRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS 189
SPS + E+ VL + +RPA + + LL A ++K L G
Sbjct: 113 SPSGLIRGHWLMEQ-VLNWAGLPVVHLRPAWFM---ENLL-SQAPSIRKAGVLALPFPGD 167
Query: 190 TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV 249
R+ P+ D+A L D ++YEL GP+ T++E+A + + YV V
Sbjct: 168 GRLPPIATDDIARVAAKLLLDPEWHGHRVYELTGPEDLTMNEIAAALSRVLGRPVRYVPV 227
Query: 250 P 250
P
Sbjct: 228 P 228
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 2e-08
Identities = 62/265 (23%), Positives = 92/265 (34%), Gaps = 76/265 (28%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TG LGR +V+ L + G +V+ G R DL D + ++
Sbjct: 4 ITGATGMLGRALVRLLKERGYEVI----GT-GRSRASLFKLDL----------TDPDAVE 48
Query: 72 ATMA--KANVVINLIGREYETRNYSFED-------VNHFMAERIAGIAKEHGGIMRFIQI 122
+ K +V+IN TR E VN E +A AKE G R I I
Sbjct: 49 EAIRDYKPDVIINCAA---YTRVDKCESDPELAYRVNVLAPENLARAAKEVG--ARLIHI 103
Query: 123 S--CLGASSSSPSRVFS--------------------TKAAAEEAVLRELPWATIMRPAA 160
S VF +K E AVL P I+R +
Sbjct: 104 STDY----------VFDGKKGPYKEEDAPNPLNVYGKSKLLGEVAVLNANPRYLILRTSW 153
Query: 161 MIG---TEDRLLNKW---AQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213
+ G + + A K+ N G P Y D+A A+ ++ +
Sbjct: 154 LYGELKNGENFVEWMLRLAAERKEVNVVHDQIG------SPTYAADLADAILELIERNSL 207
Query: 214 SMGKIYELGGPDIFTVHELAELMYD 238
+ G IY L + +E A+L+ D
Sbjct: 208 T-G-IYHLSNSGPISKYEFAKLIAD 230
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 52.3 bits (126), Expect = 3e-08
Identities = 43/211 (20%), Positives = 68/211 (32%), Gaps = 43/211 (20%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TG GR +V++L G QV R K V + + D +
Sbjct: 3 VIGATGKTGRRLVKELLARGHQVTALSR------NPSKAPAPGVTPV--QKDLFDLADLA 54
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA---- 127
+A + V++ G + + + + A G+ R + +S G
Sbjct: 55 EALAGVDAVVDAFGARPD---------DSDGVKHLLDAAARA-GVRRIVVVSAAGLYRDE 104
Query: 128 -------SSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
+ KAAAEE + L W TI+RP A+ E
Sbjct: 105 PGTFRLDDAPLFPPYARAKAAAEELLRASGLDW-TIVRPGALFDEEGETYEIG------- 156
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210
+ DVAAA+ L++
Sbjct: 157 -----TEGDPAGESSISRADVAAALLDELEN 182
|
Length = 182 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 7e-08
Identities = 62/280 (22%), Positives = 103/280 (36%), Gaps = 61/280 (21%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TG++G +V +L + G QV R P L ++ ++ + D +++
Sbjct: 3 VTGATGYVGGRLVPRLLQEGHQVRALVR----SPEKLADRPWSERVTVVRGDLEDPESLR 58
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A + + L+ FE+ + A A A+ G+ R I + L
Sbjct: 59 AALEGIDTAYYLVHSMGSGG--DFEEADRRAARNFARAARA-AGVKRIIYLGGLIPKGEE 115
Query: 132 PSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTE-----------DRL----LNKWAQ 174
S ++A E +LR +P T +R A +IG+ +RL +W
Sbjct: 116 LSPHLRSRAEVGE-ILRAGGVP-VTELRAAVIIGSGSASFEMVRYLVERLPVMITPRWVN 173
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
T QP+ + DV + AAL T G+ +E+GGPD+ + ++ E
Sbjct: 174 ---------------TPCQPIAIRDVLEYLVAALDRPAT-AGETFEIGGPDVLSYKDMME 217
Query: 235 LMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPR 274
V R +L VP PR
Sbjct: 218 RF------------------AEVRGLRRWIL-PVPVLTPR 238
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.8 bits (127), Expect = 8e-08
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 138 TKAAAEEAVL----RELPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRI 192
TKA AE VL R+ +RPA + G D+ L+ ++ +K +FG G+ +
Sbjct: 144 TKAIAEIIVLEANGRDDLLTCALRPAGIFGPGDQGLVPILFEWAEKGLVKFVFGRGNNLV 203
Query: 193 QPVYVVDVAAA---VTAALKDDGTSMGKIYELGGPDIFTVHELA----ELMYDTIREYPH 245
YV ++A A AAL T G+ Y + + + EL + + R
Sbjct: 204 DFTYVHNLAHAHILAAAALVKGKTISGQTYFITDAEPHNMFELLRPVWKALGFGSR---P 260
Query: 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL 280
+++ P+A A+ E++ F L +F+
Sbjct: 261 KIRLSGPLAYCAALLSELVS----FMLGPYFVFSP 291
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.4 bits (126), Expect = 1e-07
Identities = 39/192 (20%), Positives = 63/192 (32%), Gaps = 34/192 (17%)
Query: 128 SSSSPSRV-----FSTKAAAEEAVLRELPWA------TIMRPAAMIGTEDRLLNKWAQFV 176
+ +P R +S A E +L E T++RPA ++G R +
Sbjct: 125 TEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATILGPGTRNTTR---DF 181
Query: 177 KKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
P+ G Q ++ DVA A+ A++ T I+ + G + +
Sbjct: 182 LSPRRLPVPGGFDPPFQFLHEDDVARALVLAVRAGATG---IFNVAGDGPVPLSLVLA-- 236
Query: 237 YDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296
V +P P+ A+A R L P P P + V D
Sbjct: 237 ----LLGRRPVPLPSPLPAALAAAR--RLGLRPLP---PEQL------DFLQYPPVMDTT 281
Query: 297 LTFQDLGIVPHK 308
+LG P
Sbjct: 282 RARVELGWQPKH 293
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 50.8 bits (122), Expect = 2e-07
Identities = 57/224 (25%), Positives = 90/224 (40%), Gaps = 28/224 (12%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMG--SQVLVPFR-GCEDDPRHLKLMGDLGQIVPMKFNPR 65
A V G TG +G++++++L K S+V R KL+ QIV
Sbjct: 2 TALVLGATGLVGKHLLRELLKSPYYSKVTAIVRRKLTFPEAKEKLV----QIV------V 51
Query: 66 DDNTIKA---TMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
D + +V +G R+ +F V+H ++A +AK G+ F+
Sbjct: 52 DFERLDEYLEAFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKA-AGVQHFL 110
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIG--TEDRLLNKWAQFVK 177
+S LGA S K E + + TI RP ++G E R + AQ +
Sbjct: 111 LVSSLGADPKSSFLYLKVKGEVERDLQKLGFERLTIFRPGLLLGERQESRPGERLAQKL- 169
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVA-AAVTAALKDDGTSMGKIYE 220
L G + +P+ VA A V AALK+ + +I E
Sbjct: 170 ---LRILSPLGFPKYKPIPAETVAKAMVKAALKESSNKV-EILE 209
|
Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 3e-07
Identities = 60/291 (20%), Positives = 107/291 (36%), Gaps = 49/291 (16%)
Query: 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVP-MKFNPRD------ 66
G TGFLGR++V++L + G +VLV R E + + + G ++ D
Sbjct: 5 GGTGFLGRHLVKRLLENGFKVLVLVRS-ESLGEAHERIEEAGLEADRVRVLEGDLTQPNL 63
Query: 67 ----DNTIKATMAKANVVINLIGREYETRNYSFED---VNHFMAERIAGIAKEHGGIMRF 119
+ + K + VI+ Y+ ED N E + +A I RF
Sbjct: 64 GLSAAASRELA-GKVDHVIHCAA-SYDF-QAPNEDAWRTNIDGTEHVLELAAR-LDIQRF 119
Query: 120 IQISCLGASSSSPSRV---------------FSTKAAAEEAVLRE---LPWATIMRPAAM 161
+S + + + +KA AE+ V +P T+ RP+ +
Sbjct: 120 HYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKAEAEQLVRAAATQIPL-TVYRPSIV 178
Query: 162 IGT----EDRLLNKWAQFVKKFN----FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213
+G ++ + + + P+ G+ R+ V V VA A+ K
Sbjct: 179 VGDSKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLVPVDYVADAIVYLSKKPEA 238
Query: 214 SMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREIL 264
+ G+I+ L P T+ E+A+L P + + A P +
Sbjct: 239 N-GQIFHLTDPTPQTLREIADLFKSAF-LSPGLLVLLMNEPNASL-PNALR 286
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|224016 COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 1e-06
Identities = 62/290 (21%), Positives = 96/290 (33%), Gaps = 60/290 (20%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G G LG + + L +V+ R D ++ + + P
Sbjct: 5 ITGANGQLGTELRRALPG-EFEVIATDRAELDITDPDAVLEVIRETRP------------ 51
Query: 72 ATMAKANVVINLIGREY------ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+VVIN Y E+ VN AE +A A E G R + IS
Sbjct: 52 ------DVVINAAA--YTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTD 101
Query: 126 ----GASSS--------SPSRVFS-TKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKW 172
G +P V+ +K A EEAV P I+R + + G K
Sbjct: 102 YVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKT 161
Query: 173 AQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231
++ L P Y D+A A+ L+ + G +Y L + +E
Sbjct: 162 --MLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKE--GGVYHLVNSGECSWYE 217
Query: 232 LAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD 281
A+ + E +V P+A + P P RP +LD
Sbjct: 218 FAKAI---FEEAGVDGEVIEPIA----------SAEYPTPAKRPANSSLD 254
|
Length = 281 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 55/236 (23%), Positives = 85/236 (36%), Gaps = 27/236 (11%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
VFG TG+ G VV+ K G V R L ++V + D ++
Sbjct: 2 LVFGATGYQGGSVVRASLKAGHPVRALVRD-PKSELAKSLKAAGVELVEGDLD--DHESL 58
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ +VV ++ G ED +++A AKE G+ FI
Sbjct: 59 VEALKGVDVVFSVTGFWLSKE---IED-----GKKLADAAKE-AGVKHFIPSEFGNDVDR 109
Query: 131 S----PSRV-FSTKAAAEEAVLRELPW-ATIMRPAAMIGTEDRLLNKWAQFVKK---FNF 181
S P+ F +KA E + R L T + +G L+ A +
Sbjct: 110 SNGVEPAVPHFDSKAEVERYI-RALGIPYTFVYAGFFMGN---FLSNLAPPGDLAPPRDK 165
Query: 182 FPLFGDGSTRIQPV-YVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
L G G+ + P+ D+ V L D GK G +I + +E+AEL
Sbjct: 166 VTLLGPGNPKAVPLDDEEDIGTYVIKILDDPRKLKGKYIRPPG-NILSGNEIAELW 220
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|218026 pfam04321, RmlD_sub_bind, RmlD substrate binding domain | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 64/298 (21%), Positives = 94/298 (31%), Gaps = 83/298 (27%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED--DPRHLKLMGDLGQIVPMKFNPRDDNT 69
V G G LGR + + LA+ G +V+ R D DP
Sbjct: 3 VTGANGQLGRELTRLLAERGVEVVALDRPELDLTDP----------------------EA 40
Query: 70 IKATMAKA--NVVINLIG--------REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRF 119
+ A + +A +VV+N E E VN +A G
Sbjct: 41 VAALVREARPDVVVNAAAYTAVDKAESEPELA----YAVNALGPGNLAEACAARGA--PL 94
Query: 120 IQIS---CLGASSSSPSRVFS----------TKAAAEEAVLRELPWATIMRPAAMIGTED 166
I IS + P R TK A E+AVL P I+R A + G
Sbjct: 95 IHISTDYVFDGAKGGPYREDDPTGPLNVYGRTKLAGEQAVLAANPRHLILRTAWVYGEYG 154
Query: 167 RLLNKWAQFVKKFNFFPLFGDGST-------RIQPVYVVDVAAAVTAALK--DDGTSMGK 217
FVK L + P D+A A+ A ++ G ++
Sbjct: 155 N------NFVKT--MLRLAAERDELRVVDDQLGSPTSARDLADALLALIRKRLRGPALAG 206
Query: 218 IYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRP 275
Y L G + ++ A ++D V+ P+ A + P P RP
Sbjct: 207 TYHLAGSGETSWYDFARAIFDEAGADGGRVR---PIPTA----------EYPTPARRP 251
|
L-rhamnose is a saccharide required for the virulence of some bacteria. Its precursor, dTDP-L-rhamnose, is synthesised by four different enzymes the final one of which is RmlD. The RmlD substrate binding domain is responsible for binding a sugar nucleotide. Length = 284 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 47/234 (20%), Positives = 81/234 (34%), Gaps = 30/234 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G TG LG +V L V V R + G ++VP+ + + +
Sbjct: 4 IAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGV--KVVPVDYASHES--L 59
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI--QISC--LG 126
A + + VI+ +G ++ A G+ RFI +
Sbjct: 60 VAALKGVDAVISALGGAAIGD-----------QLKLIDAAIAA-GVKRFIPSEFGVDYDR 107
Query: 127 ASSSSPSRVFSTKAAAEEAV---LRELPWATIMRPAAMIGTEDRLLNKWAQFVK-KFNFF 182
+ +F K + LPW + M D LL V
Sbjct: 108 IGALPLLDLFDEKRDVRRYLRAKNAGLPWTYV--STGMFL--DYLLEPLFGVVDLANRTA 163
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
++GDG T+ + D+ AV AL ++ ++ + G D+ T +EL L+
Sbjct: 164 TIYGDGETKFAFTTLEDIGRAVARALTHPDRTLNRVVFVAG-DVVTQNELIALV 216
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 154 TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDG 212
+I+RP A + L + VK + +FGDG +P+ D+A+ + + D+
Sbjct: 213 SIVRPTAFFKS----LGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE- 267
Query: 213 TSMGKIYELGGPD-IFTVHELAELMYDTIREYPHYVKVP 250
+ + K+ +GGP T E E+++ + + P + KVP
Sbjct: 268 SKINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVP 306
|
Length = 390 |
| >gnl|CDD|183375 PRK11908, PRK11908, NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 211 DGTSMGKIYELGGP-DIFTVHELAELMYDTIREYPHY 246
DG + GKIY +G P + +V ELA M + EYP Y
Sbjct: 241 DGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEY 277
|
Length = 347 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 3e-04
Identities = 52/243 (21%), Positives = 90/243 (37%), Gaps = 46/243 (18%)
Query: 12 VFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
V G GFLGR++V+ L + G +V V P L+ L I ++ + D
Sbjct: 2 VTGGGGFLGRHIVRLLLREGELQEVRVFDL--RFSPELLEDFSKLQVITYIEGDVTDKQD 59
Query: 70 IKATMAKANVVI------NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123
++ + ++VVI ++ G+ Y VN + + + G+ + S
Sbjct: 60 LRRALQGSDVVIHTAAIIDVFGKAYRDTIM---KVNVKGTQNVLDACVKA-GVRVLVYTS 115
Query: 124 CLGAS------------------SSSPSRVFS-TKAAAEEAVLRE---------LPWATI 155
+ S+ + +KA AE+ VL+ +
Sbjct: 116 SMEVVGPNSYGQPIVNGDETTPYESTHQDPYPESKALAEKLVLKANGSTLKNGGRLYTCA 175
Query: 156 MRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA-AAVTAA--LKDD 211
+RPA + G D L + +K GD + VYV +VA A + AA L+D
Sbjct: 176 LRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTGDKNVLSDRVYVGNVAWAHILAARALQDP 235
Query: 212 GTS 214
+
Sbjct: 236 KKA 238
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 0.001
Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 41/251 (16%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G GF+GR +V +L G +V + R E+ + L +P D ++
Sbjct: 4 VTGANGFIGRALVDKLLSRGEEVRIAVRNAENAEPSVVLA-----ELP------DIDSFT 52
Query: 72 ATMAKANVVINLIGREYETRNYS------FEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ V++L R + + + VN + R+A A G+ RF+ +S +
Sbjct: 53 DLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQ-GVKRFVFLSSV 111
Query: 126 GA-SSSSPSRVFST-------------KAAAEEAVLRELPW-----ATIMRPAAMIGTED 166
+ F K AE A+L EL I+RP + G
Sbjct: 112 KVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALL-ELGASDGMEVVILRPPMVYGPGV 170
Query: 167 RL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
R + + + + P + R V + ++ A+ + + + +
Sbjct: 171 RGNFARLMRLIDRGLPLPPGAVKNRR-SLVSLDNLVDAIYLCISLPKAA-NGTFLVSDGP 228
Query: 226 IFTVHELAELM 236
+ EL + +
Sbjct: 229 PVSTAELVDEI 239
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 327 | |||
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 100.0 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 100.0 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.97 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.97 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.97 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.97 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.97 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.96 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.96 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.96 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.95 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.95 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.95 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.94 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.94 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.93 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.93 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.93 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.93 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.92 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.91 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.9 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.9 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.89 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.88 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.88 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.88 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.87 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.87 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.87 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.87 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.86 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.85 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.85 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.84 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.84 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.83 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.83 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.83 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.83 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.83 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.83 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.82 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.82 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.82 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.81 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.81 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.81 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.81 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.81 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.81 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.81 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.79 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.79 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.79 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.79 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.78 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.78 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.78 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.78 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.78 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.78 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.77 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.77 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.77 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.77 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.76 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.76 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.76 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.76 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.76 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.76 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.76 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.76 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.76 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.76 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.75 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.75 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.74 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.74 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.74 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.74 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.73 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.73 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.73 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.73 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.73 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.73 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.72 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.72 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.72 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.71 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.71 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.71 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.71 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.71 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.7 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.7 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.7 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.7 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.7 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.69 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.69 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.68 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.68 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.68 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.68 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.67 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.65 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.64 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.64 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.64 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.62 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.62 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.61 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.6 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.6 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.6 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.59 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.59 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.58 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.56 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.56 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.55 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.54 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.5 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.49 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.49 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.48 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.44 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.42 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.41 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.4 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.39 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.39 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.38 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.38 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.38 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.36 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.29 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.29 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.27 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.27 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.26 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.25 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.25 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.22 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 99.15 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.1 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.1 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 99.08 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.04 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.92 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.9 | |
| PLN00106 | 323 | malate dehydrogenase | 98.9 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.81 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.73 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.72 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.71 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.71 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.69 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.64 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.55 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.54 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.54 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.49 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.39 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 98.34 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.34 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.33 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.32 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.28 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 98.25 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.25 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 98.23 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.22 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.18 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 98.1 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 98.09 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 98.08 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 98.08 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 98.06 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 98.01 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.01 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.98 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.98 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.98 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.9 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.9 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.88 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.88 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.88 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.85 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.85 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.84 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.84 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.84 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.82 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.79 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.78 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.77 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.77 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.74 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.74 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.72 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.72 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.7 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 97.69 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.69 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.66 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.65 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.65 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.63 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.63 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.62 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 97.62 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.61 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.59 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.5 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.49 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.49 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.48 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 97.46 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 97.44 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 97.44 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.41 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 97.41 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.41 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.41 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.37 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 97.37 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.37 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.36 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.35 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.34 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.32 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 97.31 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.3 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.29 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.29 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.29 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.29 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 97.28 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 97.27 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 97.24 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.24 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 97.23 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.22 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.2 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 97.19 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 97.19 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 97.19 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.18 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.17 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 97.16 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.15 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 97.13 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.11 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 97.11 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 97.1 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 97.09 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 97.08 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.07 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 97.07 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 97.04 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 97.03 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.03 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 97.0 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.99 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 96.99 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.99 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.98 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.97 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 96.96 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.96 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.95 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 96.95 | |
| KOG0172 | 445 | consensus Lysine-ketoglutarate reductase/saccharop | 96.94 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.94 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.94 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 96.93 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 96.91 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.91 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.89 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.89 | |
| PF13380 | 116 | CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5 | 96.88 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.88 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.85 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.85 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.84 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 96.84 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.83 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.82 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.81 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.81 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 96.81 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.81 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.8 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.79 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 96.78 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 96.78 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.77 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.73 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.71 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.7 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.7 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.69 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.69 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.68 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.68 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 96.68 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 96.67 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 96.65 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.65 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 96.63 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.61 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 96.61 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.61 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.61 | |
| PRK10537 | 393 | voltage-gated potassium channel; Provisional | 96.6 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.6 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.58 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.57 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.56 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.55 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.54 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.53 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 96.53 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 96.51 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 96.51 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.49 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 96.48 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.47 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.47 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.46 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 96.44 | |
| PLN02775 | 286 | Probable dihydrodipicolinate reductase | 96.43 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.43 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.42 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.4 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.38 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 96.37 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.36 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.35 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 96.34 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.34 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.33 | |
| TIGR01142 | 380 | purT phosphoribosylglycinamide formyltransferase 2 | 96.33 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.32 | |
| PLN02948 | 577 | phosphoribosylaminoimidazole carboxylase | 96.31 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 96.3 | |
| PRK13982 | 475 | bifunctional SbtC-like/phosphopantothenoylcysteine | 96.26 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 96.23 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.22 | |
| TIGR02130 | 275 | dapB_plant dihydrodipicolinate reductase. This nar | 96.21 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 96.2 |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=307.55 Aligned_cols=291 Identities=15% Similarity=0.091 Sum_probs=223.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc----c--CCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL----M--GDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~----~--~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
+.+|+|||||||||||++|+++|+++|++|++++|........+.. . ....+++++.+|+++.+.+.++++++|
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~d 92 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNVD 92 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCCC
Confidence 3468999999999999999999999999999999865432211110 0 011357889999999999999999999
Q ss_pred EEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------C-chHHHhHHH
Q 047628 79 VVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------P-SRVFSTKAA 141 (327)
Q Consensus 79 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------~-~~y~~~K~~ 141 (327)
+|||+|+.... ..+....++|+.++.+++++|++.+ +++|||+||..+++.. | ++|+.+|..
T Consensus 93 ~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~ 171 (348)
T PRK15181 93 YVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYV 171 (348)
T ss_pred EEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHH
Confidence 99999986432 3455678999999999999999998 9999999998776421 1 689999999
Q ss_pred HHHHHHhh----CCCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 142 AEEAVLRE----LPWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 142 ~E~~~~~~----~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+|.+++.+ +++++++||+.+|||++ .+++.+...+..++.+.++|++.+.++|+|++|+|++++.++..
T Consensus 172 ~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~ 251 (348)
T PRK15181 172 NELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATT 251 (348)
T ss_pred HHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 99987653 59999999999999954 24667776677777888889999999999999999999987764
Q ss_pred CC--CCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhc
Q 047628 211 DG--TSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288 (327)
Q Consensus 211 ~~--~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
+. . .+++||+++++.+|++|+++.+.+.++.......... . .. .+.. ... ..
T Consensus 252 ~~~~~-~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~------------~-~~----~~~~----~~~----~~ 305 (348)
T PRK15181 252 NDLAS-KNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAE------------P-IY----KDFR----DGD----VK 305 (348)
T ss_pred ccccC-CCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCC------------c-cc----CCCC----CCc----cc
Confidence 32 2 4689999999999999999999998874211000000 0 00 0000 000 11
Q ss_pred CcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 289 DTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 289 ~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
....+. +++++.|||.|+ +++|+++++++|++.+
T Consensus 306 ~~~~d~-~k~~~~lGw~P~~sl~egl~~~~~w~~~~ 340 (348)
T PRK15181 306 HSQADI-TKIKTFLSYEPEFDIKEGLKQTLKWYIDK 340 (348)
T ss_pred ccccCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 233454 488888999998 9999999999999865
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-42 Score=282.77 Aligned_cols=282 Identities=18% Similarity=0.165 Sum_probs=234.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCC-CCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGC-EDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~ 82 (327)
|++|||||.||||+++++.++++. .+|++++.-. ......+....+.++..++++|++|.+.+.++++ .+|+|+|
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~Vvh 80 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDAVVH 80 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCeEEE
Confidence 689999999999999999999874 5678877643 2223334444445789999999999999999998 4899999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEeccCCCCC-----------CC----chHHHhHHHH
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCLGASSS-----------SP----SRVFSTKAAA 142 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~~v~~~-----------~~----~~y~~~K~~~ 142 (327)
+|+-++. ..|..+.++|+.||.+|++++++.. .+ ||+++||-.|+++ +| +||+.||++.
T Consensus 81 fAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~-~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAas 159 (340)
T COG1088 81 FAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYW-GKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAAS 159 (340)
T ss_pred echhccccccccChhhhhhcchHHHHHHHHHHHHhc-ccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhH
Confidence 9998765 3568899999999999999999997 43 9999999877532 22 8999999999
Q ss_pred HHHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCC
Q 047628 143 EEAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM 215 (327)
Q Consensus 143 E~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 215 (327)
+.+++++ +++++|.|++.-|||.+ .+++..+..+..+.++|+.|+|.+.++|+||+|-++++..+++++..
T Consensus 160 D~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg~~-- 237 (340)
T COG1088 160 DLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKGKI-- 237 (340)
T ss_pred HHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcCcC--
Confidence 9888765 69999999999999965 57888888888899999999999999999999999999999999986
Q ss_pred CceEEecCCccccHHHHHHHHHHHhhcCCc-----cccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCc
Q 047628 216 GKIYELGGPDIFTVHELAELMYDTIREYPH-----YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290 (327)
Q Consensus 216 ~~~~~v~~~~~~s~~el~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
|++|||+++.-.+..|+++.|++.+|+..+ +..+. ++-..+.
T Consensus 238 GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~---------------------------------DRpGHD~ 284 (340)
T COG1088 238 GETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVE---------------------------------DRPGHDR 284 (340)
T ss_pred CceEEeCCCccchHHHHHHHHHHHhCccccchhhheEecc---------------------------------CCCCCcc
Confidence 999999998889999999999999997655 22222 0112223
Q ss_pred ccCCC-cccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 291 IVSDN-ALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 291 ~~~~~-~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
++..+ +|..++|||.|. +|+++++++++||.++-|
T Consensus 285 RYaid~~Ki~~eLgW~P~~~fe~GlrkTv~WY~~N~~ 321 (340)
T COG1088 285 RYAIDASKIKRELGWRPQETFETGLRKTVDWYLDNEW 321 (340)
T ss_pred ceeechHHHhhhcCCCcCCCHHHHHHHHHHHHHhchH
Confidence 33332 488899999998 999999999999998643
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=281.15 Aligned_cols=279 Identities=21% Similarity=0.196 Sum_probs=225.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~ 85 (327)
|+||||||.|+||+|.+.+|++.|++|++++.-.......+... ..+++++|+.|.+.+.+.|+. +|+|||+|+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa 76 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEENKIDAVVHFAA 76 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhcCCCEEEECcc
Confidence 68999999999999999999999999999998776655444321 168999999999999999965 899999999
Q ss_pred ccc----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC-------------chHHHhHHHHHHHHHh
Q 047628 86 REY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP-------------SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 86 ~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~-------------~~y~~~K~~~E~~~~~ 148 (327)
... ...|..+++.|+.+|.+|+++|+++| |++|||.||+.+|+... ++||++|+..|++++.
T Consensus 77 ~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d 155 (329)
T COG1087 77 SISVGESVQNPLKYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRD 155 (329)
T ss_pred ccccchhhhCHHHHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHH
Confidence 854 35678899999999999999999999 99999999998875432 7999999999999987
Q ss_pred h----CCCeEEEecCeeecCC------------ChhHHHHHHHHhhc-Cceeeec------CCCceecceeHHHHHHHHH
Q 047628 149 E----LPWATIMRPAAMIGTE------------DRLLNKWAQFVKKF-NFFPLFG------DGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 149 ~----~~~~~i~r~~~~~G~~------------~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D~a~~~~ 205 (327)
. +++++++|-..+-|.. .+.++...+.+... +.+.++| ||...+++|||.|+|++.+
T Consensus 156 ~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~ 235 (329)
T COG1087 156 AAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAHV 235 (329)
T ss_pred HHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHHH
Confidence 6 4999999998888752 12445554444432 3466666 5678999999999999999
Q ss_pred HHhhcCCCC-CCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHH
Q 047628 206 AALKDDGTS-MGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284 (327)
Q Consensus 206 ~~l~~~~~~-~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (327)
.+++.-... ...+||+++++..|..|+++.+.+++|+++++...|. . ..+|
T Consensus 236 ~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~R---------------R----~GDp--------- 287 (329)
T COG1087 236 LALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPR---------------R----AGDP--------- 287 (329)
T ss_pred HHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCC---------------C----CCCC---------
Confidence 988753320 2259999999999999999999999999888766651 1 1111
Q ss_pred hhhcCcccCCCcccccccCCccc--cccCccHHHHHHHh-hC
Q 047628 285 AYTSDTIVSDNALTFQDLGIVPH--KLKGYPTEYLIWYR-KG 323 (327)
Q Consensus 285 ~~~~~~~~~~~~~~~~~lg~~p~--~~~~~l~~~~~~~~-~~ 323 (327)
...+.+.+|++++|||+|+ ++++.+++..+|.. ++
T Consensus 288 ----a~l~Ad~~kA~~~Lgw~p~~~~L~~ii~~aw~W~~~~~ 325 (329)
T COG1087 288 ----AILVADSSKARQILGWQPTYDDLEDIIKDAWDWHQQRH 325 (329)
T ss_pred ----ceeEeCHHHHHHHhCCCcccCCHHHHHHHHHHHhhhhc
Confidence 2345556799999999997 89999999999988 44
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=299.62 Aligned_cols=301 Identities=20% Similarity=0.172 Sum_probs=229.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+|+|||||||+|++++++|+++||+|++++|+.++.. .+.. .+++++.+|++|++++.++++++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~~----~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~ 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLKE----WGAELVYGDLSLPETLPPSFKGVTAIIDASTSR 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHhh----cCCEEEECCCCCHHHHHHHHCCCCEEEECCCCC
Confidence 58999999999999999999999999999999865421 1111 258999999999999999999999999998643
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCCCh
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDR 167 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~~~ 167 (327)
...+..+.++|+.++.+++++|+++| +++||++||.++......+|..+|..+|+++++.+++++++||+.+|+.
T Consensus 76 -~~~~~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~~~~~~~~~K~~~e~~l~~~~l~~tilRp~~~~~~--- 150 (317)
T CHL00194 76 -PSDLYNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQYPYIPLMKLKSDIEQKLKKSGIPYTIFRLAGFFQG--- 150 (317)
T ss_pred -CCCccchhhhhHHHHHHHHHHHHHcC-CCEEEEeccccccccCCChHHHHHHHHHHHHHHcCCCeEEEeecHHhhh---
Confidence 23345678889999999999999999 9999999998776555678999999999999999999999999988842
Q ss_pred hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc
Q 047628 168 LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247 (327)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~ 247 (327)
++..+...+....+..+ +++.+.++++|++|+|++++.+++.+.. .+++||+++++.+|++|+++.+.+.+|++..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~ 228 (317)
T CHL00194 151 LISQYAIPILEKQPIWI-TNESTPISYIDTQDAAKFCLKSLSLPET-KNKTFPLVGPKSWNSSEIISLCEQLSGQKAKIS 228 (317)
T ss_pred hhhhhhhhhccCCceEe-cCCCCccCccCHHHHHHHHHHHhcCccc-cCcEEEecCCCccCHHHHHHHHHHHhCCCCeEE
Confidence 22222222222333333 4566788999999999999999987765 689999999999999999999999999999999
Q ss_pred cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCcc---ccccCccHHHHH----HH
Q 047628 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP---HKLKGYPTEYLI----WY 320 (327)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p---~~~~~~l~~~~~----~~ 320 (327)
++|.+..+....+...+ ++..+.+..+....+..+......++ ..+.+.||+.| .+++++++++++ .+
T Consensus 229 ~vp~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 303 (317)
T CHL00194 229 RVPLFLLKLLRQITGFF----EWTWNISDRLAFVEILNTSNNFSSSM-AELYKIFKIDPNELISLEDYFQEYFERILKRL 303 (317)
T ss_pred eCCHHHHHHHHHHHhhc----ccchhhHHHHHHHHHHhcCCCcCCCH-HHHHHHhCCChhhhhhHHHHHHHHHHHHHHHH
Confidence 99999998877644422 22122221122233333333333344 47778999997 467777666554 45
Q ss_pred hhCCC
Q 047628 321 RKGGP 325 (327)
Q Consensus 321 ~~~g~ 325 (327)
++.+|
T Consensus 304 ~~~~~ 308 (317)
T CHL00194 304 KDINY 308 (317)
T ss_pred Hhcch
Confidence 55554
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=295.31 Aligned_cols=296 Identities=21% Similarity=0.234 Sum_probs=216.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
..|+|||||||||||++|+++|+++ |++|++++|+.++........ ...++++++.+|++|.+.+.++++++|+|||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH 92 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN 92 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence 3579999999999999999999998 599999998765422111100 0013689999999999999999999999999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC---------------------------
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------------------- 131 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------------------- 131 (327)
||+.... ..+.+....|+.++.+++++|++.+ ++|||+||..+|+..
T Consensus 93 lAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~ 170 (386)
T PLN02427 93 LAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPC 170 (386)
T ss_pred cccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCccccccccccccccccccccc
Confidence 9986432 2334566789999999999999876 699999997665321
Q ss_pred --------CchHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCCh--------------hHHHHHHHHhhcCceeee
Q 047628 132 --------PSRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTEDR--------------LLNKWAQFVKKFNFFPLF 185 (327)
Q Consensus 132 --------~~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~--------------~~~~~~~~~~~~~~~~~~ 185 (327)
.+.|+.+|..+|++++.+ +++++++||+.+||++.. .+..+...+.+++++.++
T Consensus 171 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 250 (386)
T PLN02427 171 IFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLV 250 (386)
T ss_pred ccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEE
Confidence 136999999999999764 599999999999999642 233444555567778888
Q ss_pred cCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCC-ccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHH
Q 047628 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREIL 264 (327)
Q Consensus 186 ~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 264 (327)
+++.+.++|+|++|+|++++.+++++....+++||++++ +.+|+.|+++.+.+.+|..............
T Consensus 251 g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~--------- 321 (386)
T PLN02427 251 DGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVD--------- 321 (386)
T ss_pred CCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccc---------
Confidence 888899999999999999999998764214679999997 5899999999999999842110000000000
Q ss_pred hhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 265 LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
.|... .... ..........+.++++++|||+|+ +++++++++++|+++
T Consensus 322 -------~~~~~-~~~~--~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~ 370 (386)
T PLN02427 322 -------VSSKE-FYGE--GYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHK 370 (386)
T ss_pred -------cCccc-ccCc--cccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHH
Confidence 00000 0000 000111223334588899999997 999999999999876
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=295.06 Aligned_cols=275 Identities=19% Similarity=0.196 Sum_probs=215.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
.|+|||||||||||++|+++|+++|++|++++|...............++++++.+|+.+. .+.++|+|||||+.
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~-----~~~~~D~ViHlAa~ 194 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEP-----ILLEVDQIYHLACP 194 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECccccc-----cccCCCEEEECcee
Confidence 5899999999999999999999999999999986433222221111123578888888664 34689999999986
Q ss_pred ccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------C----chHHHhHHHHHH
Q 047628 87 EYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------P----SRVFSTKAAAEE 144 (327)
Q Consensus 87 ~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~----~~y~~~K~~~E~ 144 (327)
... .++...+++|+.++.+|+++|++.+ + +|||+||..+|++. | +.|+.+|..+|+
T Consensus 195 ~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~ 272 (436)
T PLN02166 195 ASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAET 272 (436)
T ss_pred ccchhhccCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHH
Confidence 432 3456788899999999999999998 5 89999998765321 2 569999999999
Q ss_pred HHHhh----CCCeEEEecCeeecCCC-----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCC
Q 047628 145 AVLRE----LPWATIMRPAAMIGTED-----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM 215 (327)
Q Consensus 145 ~~~~~----~~~~~i~r~~~~~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 215 (327)
+++.+ +++++++||+.+||+++ ..+..++..+.+++.+.++|++++.++|+|++|+++++..+++.+.
T Consensus 273 ~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~~--- 349 (436)
T PLN02166 273 LAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGEH--- 349 (436)
T ss_pred HHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcCC---
Confidence 98764 59999999999999963 3566777777777888888999999999999999999999998543
Q ss_pred CceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCC
Q 047628 216 GKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295 (327)
Q Consensus 216 ~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (327)
+++||+++++.+|+.|+++.+++.+|.+..+...+. .+. + ......+.
T Consensus 350 ~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~--------------------~~~------~-----~~~~~~d~- 397 (436)
T PLN02166 350 VGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPN--------------------TAD------D-----PHKRKPDI- 397 (436)
T ss_pred CceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCC--------------------CCC------C-----ccccccCH-
Confidence 459999999999999999999999987654433320 000 0 01123344
Q ss_pred cccccccCCccc-cccCccHHHHHHHhhC
Q 047628 296 ALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 296 ~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
+|+++.|||+|+ +++++++++++||++.
T Consensus 398 ~Ka~~~LGw~P~~sl~egl~~~i~~~~~~ 426 (436)
T PLN02166 398 SKAKELLNWEPKISLREGLPLMVSDFRNR 426 (436)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 589899999997 9999999999999863
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-39 Score=289.37 Aligned_cols=295 Identities=17% Similarity=0.195 Sum_probs=218.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCC-ChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR-DDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~d~vi~~a 84 (327)
||+|||||||||||++|+++|++. |++|++++|+......... .++++++.+|++ +.+.+.++++++|+|||||
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~~d~ViH~a 76 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVN----HPRMHFFEGDITINKEWIEYHVKKCDVILPLV 76 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhcc----CCCeEEEeCCCCCCHHHHHHHHcCCCEEEECc
Confidence 368999999999999999999986 6999999986543221111 135899999997 6778888889999999999
Q ss_pred cccc----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------------C-chHHHhHH
Q 047628 85 GREY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------------P-SRVFSTKA 140 (327)
Q Consensus 85 ~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------------~-~~y~~~K~ 140 (327)
+... ..++...+++|+.++.+++++|++.+ ++|||+||..+++.. | +.|+.+|.
T Consensus 77 a~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~ 154 (347)
T PRK11908 77 AIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQ 154 (347)
T ss_pred ccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHH
Confidence 8643 23456678999999999999999987 699999997664310 1 36999999
Q ss_pred HHHHHHHhh----CCCeEEEecCeeecCCC-----------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 141 AAEEAVLRE----LPWATIMRPAAMIGTED-----------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 141 ~~E~~~~~~----~~~~~i~r~~~~~G~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.+|++++.+ +++++++||+.+||++. .++..+...+..++.+.+.+++++.++|+|++|++++++
T Consensus 155 ~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~ 234 (347)
T PRK11908 155 LMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALM 234 (347)
T ss_pred HHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHH
Confidence 999999764 59999999999999863 245566666666777788888899999999999999999
Q ss_pred HHhhcCC--CCCCceEEecCC-ccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHH
Q 047628 206 AALKDDG--TSMGKIYELGGP-DIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE 282 (327)
Q Consensus 206 ~~l~~~~--~~~~~~~~v~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (327)
.+++++. . .+++||++++ ..+|++|+++.+.+.+|....+...+.+ ........+.. .+ +. ..
T Consensus 235 ~~~~~~~~~~-~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~---~~-----~~- 300 (347)
T PRK11908 235 KIIENKDGVA-SGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKK-VKLVETTSGAY---YG---KG-----YQ- 300 (347)
T ss_pred HHHhCccccC-CCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccc-cccccCCchhc---cC---cC-----cc-
Confidence 9998763 3 5789999997 4799999999999999854332110000 00000000000 00 00 00
Q ss_pred HHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 283 INAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
. ......+ .+++++.|||+|+ +++++++++++|++++.+
T Consensus 301 -~--~~~~~~d-~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~ 340 (347)
T PRK11908 301 -D--VQNRVPK-IDNTMQELGWAPKTTMDDALRRIFEAYRGHVA 340 (347)
T ss_pred -h--hccccCC-hHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 0 0112223 3588899999998 999999999999987643
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-39 Score=283.29 Aligned_cols=301 Identities=21% Similarity=0.219 Sum_probs=236.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+|+||||+||||+++++.|+++|++|++++|+++.... +.. .+++++.+|+.+++++.++++++|+|||+++..
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~----~~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~ 75 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRN-LEG----LDVEIVEGDLRDPASLRKAVAGCRALFHVAADY 75 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccc-ccc----CCceEEEeeCCCHHHHHHHHhCCCEEEEeceec
Confidence 579999999999999999999999999999998665321 111 258899999999999999999999999999764
Q ss_pred c--ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-----------------CchHHHhHHHHHHHHHh
Q 047628 88 Y--ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-----------------PSRVFSTKAAAEEAVLR 148 (327)
Q Consensus 88 ~--~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-----------------~~~y~~~K~~~E~~~~~ 148 (327)
. ...+...+++|+.++.++++++++.+ ++++|++||..++... .+.|+.+|..+|++++.
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~ 154 (328)
T TIGR03466 76 RLWAPDPEEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALE 154 (328)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHH
Confidence 2 23345678899999999999999998 8999999997665421 14799999999999877
Q ss_pred h----CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEe
Q 047628 149 E----LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYEL 221 (327)
Q Consensus 149 ~----~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v 221 (327)
. +++++++||+.+||+++.. ...+........ .+... +...+++|++|+|+++..+++++. .++.|++
T Consensus 155 ~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~i~v~D~a~a~~~~~~~~~--~~~~~~~ 229 (328)
T TIGR03466 155 MAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGK-MPAYV--DTGLNLVHVDDVAEGHLLALERGR--IGERYIL 229 (328)
T ss_pred HHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCC-Cceee--CCCcceEEHHHHHHHHHHHHhCCC--CCceEEe
Confidence 4 5899999999999997531 222222222222 22222 234689999999999999998865 4778988
Q ss_pred cCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccc
Q 047628 222 GGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301 (327)
Q Consensus 222 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (327)
+ ++.+|+.|+++.+.+.+|.+.....+|.+.....+.+.+.+.+..+. .+..+.+.+........++. +++++.
T Consensus 230 ~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~-~k~~~~ 303 (328)
T TIGR03466 230 G-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGK----EPRVTVDGVRMAKKKMFFSS-AKAVRE 303 (328)
T ss_pred c-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCC----CCCCCHHHHHHHhccCCCCh-HHHHHH
Confidence 6 48899999999999999988888889999888887777666655433 22245555555555556665 499999
Q ss_pred cCCccccccCccHHHHHHHhhCCC
Q 047628 302 LGIVPHKLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 302 lg~~p~~~~~~l~~~~~~~~~~g~ 325 (327)
|||+|++++++++++++||+++||
T Consensus 304 lg~~p~~~~~~i~~~~~~~~~~~~ 327 (328)
T TIGR03466 304 LGYRQRPAREALRDAVEWFRANGY 327 (328)
T ss_pred cCCCCcCHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999987
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=286.18 Aligned_cols=275 Identities=16% Similarity=0.143 Sum_probs=215.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
.|+|||||||||||+++++.|+++||+|++++|.......... ..++++.+|+++.+.+.++++++|+|||+|+.
T Consensus 21 ~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa~ 95 (370)
T PLN02695 21 KLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDM-----FCHEFHLVDLRVMENCLKVTKGVDHVFNLAAD 95 (370)
T ss_pred CCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccccc-----ccceEEECCCCCHHHHHHHHhCCCEEEEcccc
Confidence 5899999999999999999999999999999986532111100 12577889999999999989999999999986
Q ss_pred ccc-----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-------------C--C----chHHHhHHHH
Q 047628 87 EYE-----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------S--P----SRVFSTKAAA 142 (327)
Q Consensus 87 ~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------~--~----~~y~~~K~~~ 142 (327)
... ..+......|+.++.+++++|++.+ +++|||+||..+|+. . | +.|+.+|..+
T Consensus 96 ~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~ 174 (370)
T PLN02695 96 MGGMGFIQSNHSVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLAT 174 (370)
T ss_pred cCCccccccCchhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHH
Confidence 421 2234456789999999999999998 999999999765431 1 1 6899999999
Q ss_pred HHHHHh----hCCCeEEEecCeeecCCCh-------hHHHHHHHHhh-cCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 143 EEAVLR----ELPWATIMRPAAMIGTEDR-------LLNKWAQFVKK-FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 143 E~~~~~----~~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
|++++. .+++++++||+.+|||++. ....+...+.. .+.+++++++++.++|+|++|++++++.+++.
T Consensus 175 E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~~~~~ 254 (370)
T PLN02695 175 EELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLRLTKS 254 (370)
T ss_pred HHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHHHHhc
Confidence 998866 3699999999999999642 23445444433 46788889999999999999999999998876
Q ss_pred CCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCc
Q 047628 211 DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290 (327)
Q Consensus 211 ~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
+. +++||+++++.+|++|+++.+.+..|.+.++...+. |.. . ...
T Consensus 255 ~~---~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~---------------------~~~--~---------~~~ 299 (370)
T PLN02695 255 DF---REPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPG---------------------PEG--V---------RGR 299 (370)
T ss_pred cC---CCceEecCCCceeHHHHHHHHHHHhCCCCCceecCC---------------------CCC--c---------ccc
Confidence 42 479999999999999999999999987655443331 000 0 011
Q ss_pred ccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 291 IVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 291 ~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
..++ +++++.|||.|+ +++++++++++|++++
T Consensus 300 ~~d~-sk~~~~lgw~p~~~l~e~i~~~~~~~~~~ 332 (370)
T PLN02695 300 NSDN-TLIKEKLGWAPTMRLKDGLRITYFWIKEQ 332 (370)
T ss_pred ccCH-HHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Confidence 2344 588889999998 9999999999999864
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-39 Score=288.11 Aligned_cols=294 Identities=17% Similarity=0.185 Sum_probs=217.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch--hhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP--RHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
|++|||||||||||+++++.|+++|++++++.++.+... ..+.......+++++.+|++|.+++.+++++ +|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 368999999999999999999999987655443322111 1111111113578889999999999999985 899999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHc---------CCcceEEEEeccCCCCC-----------CC----ch
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEH---------GGIMRFIQISCLGASSS-----------SP----SR 134 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~---------~~v~~~v~~Ss~~v~~~-----------~~----~~ 134 (327)
||+.... ..+....++|+.++.+++++|++. + +++||++||..+++. .+ +.
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~ 159 (355)
T PRK10217 81 LAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKS-AFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSP 159 (355)
T ss_pred CCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccC-ceEEEEecchhhcCCCCCCCCCcCCCCCCCCCCh
Confidence 9987532 234578899999999999999862 4 679999999766531 11 67
Q ss_pred HHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 135 y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|+.+|.++|.+++.+ +++++++||+.+|||++ .+++.+...+..++.+++++++++.++|+|++|+++++..+
T Consensus 160 Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~ 239 (355)
T PRK10217 160 YSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCV 239 (355)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHH
Confidence 999999999988654 58999999999999975 35566666566667788889999999999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
++.+.. +++||+++++.+|+.|+++.+++.+|...+..+.+..... ....+....+ . ..
T Consensus 240 ~~~~~~--~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~--~-------~~ 298 (355)
T PRK10217 240 ATTGKV--GETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYR----------DLITFVADRP--G-------HD 298 (355)
T ss_pred HhcCCC--CCeEEeCCCCcccHHHHHHHHHHHhccccccccccccccc----------ccceecCCCC--C-------CC
Confidence 987543 6899999999999999999999999864332222110000 0000000000 0 00
Q ss_pred cCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 288 SDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 288 ~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.....++ +|+++.|||+|+ +++|+++++++||+++
T Consensus 299 ~~~~~d~-~k~~~~lg~~p~~~l~e~l~~~~~~~~~~ 334 (355)
T PRK10217 299 LRYAIDA-SKIARELGWLPQETFESGMRKTVQWYLAN 334 (355)
T ss_pred cccccCH-HHHHHhcCCCCcCcHHHHHHHHHHHHHhC
Confidence 1123444 588899999997 9999999999999875
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=288.30 Aligned_cols=275 Identities=19% Similarity=0.199 Sum_probs=214.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+.|+|||||||||||++|+++|+++|++|++++|...............++++++.+|+.++ ++.++|+|||||+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~-----~l~~~D~ViHlAa 192 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEP-----ILLEVDQIYHLAC 192 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccCh-----hhcCCCEEEEeee
Confidence 35899999999999999999999999999999876433222211111124578888998765 3457999999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC--------------CC----chHHHhHHHHH
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS--------------SP----SRVFSTKAAAE 143 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~--------------~~----~~y~~~K~~~E 143 (327)
.... .++...+++|+.++.+|+++|++.+ + +|||+||..+|.+ .| +.|+.+|..+|
T Consensus 193 ~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE 270 (442)
T PLN02206 193 PASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAE 270 (442)
T ss_pred ecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHH
Confidence 6432 2456788999999999999999998 6 8999999877532 12 56999999999
Q ss_pred HHHHhh----CCCeEEEecCeeecCCC-----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 144 EAVLRE----LPWATIMRPAAMIGTED-----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 144 ~~~~~~----~~~~~i~r~~~~~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
+++..+ +++++++||+.+||++. ..+..+...+..++.+.++|++++.++++|++|+|++++.+++...
T Consensus 271 ~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~~-- 348 (442)
T PLN02206 271 TLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEH-- 348 (442)
T ss_pred HHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcCC--
Confidence 998653 59999999999999862 3456666666667778888999999999999999999999998653
Q ss_pred CCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCC
Q 047628 215 MGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (327)
++.||+++++.+|+.|+++.+++.+|.+..+...|.. +. + ......++
T Consensus 349 -~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~--------------------~~------~-----~~~~~~d~ 396 (442)
T PLN02206 349 -VGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNT--------------------ED------D-----PHKRKPDI 396 (442)
T ss_pred -CceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCC--------------------CC------C-----ccccccCH
Confidence 3599999999999999999999999865554333310 00 0 01123344
Q ss_pred CcccccccCCccc-cccCccHHHHHHHhh
Q 047628 295 NALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 295 ~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
++++++|||+|+ +++|+++++++|+++
T Consensus 397 -sKa~~~LGw~P~~~l~egl~~~~~~~~~ 424 (442)
T PLN02206 397 -TKAKELLGWEPKVSLRQGLPLMVKDFRQ 424 (442)
T ss_pred -HHHHHHcCCCCCCCHHHHHHHHHHHHHH
Confidence 589899999998 999999999999976
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=290.62 Aligned_cols=287 Identities=16% Similarity=0.177 Sum_probs=213.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch----------------hhhccc--CCCCCeeEEeeCCCC
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP----------------RHLKLM--GDLGQIVPMKFNPRD 66 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~----------------~~~~~~--~~~~~v~~~~~Dl~~ 66 (327)
.++|+|||||||||||++|+++|+++|++|++++|...... ..+... ....+++++.+|++|
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d 124 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD 124 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence 45689999999999999999999999999999875321110 000000 001258899999999
Q ss_pred hhHHHHHhcc--ccEEEEcccccccc----Cc---chhHhhhhHHHHHHHHHHHHcCCcc-eEEEEeccCCCCC------
Q 047628 67 DNTIKATMAK--ANVVINLIGREYET----RN---YSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCLGASSS------ 130 (327)
Q Consensus 67 ~~~~~~~~~~--~d~vi~~a~~~~~~----~~---~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~~v~~~------ 130 (327)
++.+.+++++ +|+|||+|+..... .+ ...+++|+.++.+++++|++.+ ++ +||++||..+|+.
T Consensus 125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~~~~~ 203 (442)
T PLN02572 125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPNIDIE 203 (442)
T ss_pred HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCCCCCc
Confidence 9999999984 89999999763321 11 2346789999999999999998 85 8999999877532
Q ss_pred ----------------CC----chHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCCh-------------------
Q 047628 131 ----------------SP----SRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTEDR------------------- 167 (327)
Q Consensus 131 ----------------~~----~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~------------------- 167 (327)
.| ++|+.+|.++|.+++.+ +++++++||+.+|||++.
T Consensus 204 E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~ 283 (442)
T PLN02572 204 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDGVFG 283 (442)
T ss_pred ccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcccchh
Confidence 02 68999999999988664 699999999999999642
Q ss_pred -hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC--ceEEecCCccccHHHHHHHHHHH---hh
Q 047628 168 -LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG--KIYELGGPDIFTVHELAELMYDT---IR 241 (327)
Q Consensus 168 -~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~--~~~~v~~~~~~s~~el~~~i~~~---~g 241 (327)
.+..+...+..++.+.++|++++.++|+|++|+|++++.+++++.. .| ++||+++ +.+|+.|+++.+.+. +|
T Consensus 284 ~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~-~g~~~i~Nigs-~~~si~el~~~i~~~~~~~g 361 (442)
T PLN02572 284 TALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAK-PGEFRVFNQFT-EQFSVNELAKLVTKAGEKLG 361 (442)
T ss_pred hHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhh-cCceeEEEeCC-CceeHHHHHHHHHHHHHhhC
Confidence 2344455555577788889999999999999999999999986533 23 5899987 679999999999999 88
Q ss_pred cCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc----cccCccHHHH
Q 047628 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH----KLKGYPTEYL 317 (327)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~----~~~~~l~~~~ 317 (327)
.+..+...|. +. +. ........+. ++++ +|||.|+ ++.+++.+++
T Consensus 362 ~~~~~~~~p~---------------------~~-----~~---~~~~~~~~d~-~k~~-~LGw~p~~~~~~l~~~l~~~~ 410 (442)
T PLN02572 362 LDVEVISVPN---------------------PR-----VE---AEEHYYNAKH-TKLC-ELGLEPHLLSDSLLDSLLNFA 410 (442)
T ss_pred CCCCeeeCCC---------------------Cc-----cc---ccccccCccH-HHHH-HcCCCCCCcHHHHHHHHHHHH
Confidence 6655443331 00 00 0011122333 4665 5999998 6779999999
Q ss_pred HHHhhCCC
Q 047628 318 IWYRKGGP 325 (327)
Q Consensus 318 ~~~~~~g~ 325 (327)
.||++.-|
T Consensus 411 ~~~~~~~~ 418 (442)
T PLN02572 411 VKYKDRVD 418 (442)
T ss_pred HHHHhhcc
Confidence 99987544
|
|
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=252.85 Aligned_cols=315 Identities=57% Similarity=0.960 Sum_probs=276.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
.+...+-|+|||||+|+.++.+|.+.|.+|++-.|..+....+++-.++...+-+...|+.|++++.++++..++|||+.
T Consensus 59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLI 138 (391)
T KOG2865|consen 59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLI 138 (391)
T ss_pred ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEee
Confidence 34456779999999999999999999999999999998888888877877889999999999999999999999999999
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGT 164 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~ 164 (327)
|.........++++|..++++|+..|++.| |.+||++|++++.-.+++-|..+|...|..+++...+.+|+||+.+||.
T Consensus 139 Grd~eTknf~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv~s~Sr~LrsK~~gE~aVrdafPeAtIirPa~iyG~ 217 (391)
T KOG2865|consen 139 GRDYETKNFSFEDVNVHIAERLARICKEAG-VERFIHVSCLGANVKSPSRMLRSKAAGEEAVRDAFPEATIIRPADIYGT 217 (391)
T ss_pred ccccccCCcccccccchHHHHHHHHHHhhC-hhheeehhhccccccChHHHHHhhhhhHHHHHhhCCcceeechhhhccc
Confidence 998888888999999999999999999999 9999999999988888899999999999999999999999999999999
Q ss_pred CChhHHHHHHHHhhcCceeeecCCC-ceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcC
Q 047628 165 EDRLLNKWAQFVKKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243 (327)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~ 243 (327)
.++++..+....++-+.+++.+.|+ +.-.++++.|+|.+|..+++++.+ .|++|...||+...+.||++.+-+...+.
T Consensus 218 eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s-~Gktye~vGP~~yql~eLvd~my~~~~~~ 296 (391)
T KOG2865|consen 218 EDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDS-MGKTYEFVGPDRYQLSELVDIMYDMAREW 296 (391)
T ss_pred chhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccc-cCceeeecCCchhhHHHHHHHHHHHHhhc
Confidence 9999999999888888899988774 677899999999999999999988 99999999999999999999999998876
Q ss_pred CccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccccccCccHHHHHHHhhC
Q 047628 244 PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKG 323 (327)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~l~~~~~~~~~~ 323 (327)
..+...|...+.......+.. ..+.|-+.+++++.++++.......+.....++||..++.++...-+.+..|++.
T Consensus 297 ~ry~r~~mP~f~a~a~~~~f~----~~pf~~~~pln~d~ie~~~v~~~vlt~~~tleDLgv~~t~le~~~~e~l~~yR~~ 372 (391)
T KOG2865|consen 297 PRYVRLPMPIFKAMAAARDFM----IVPFPPPSPLNRDQIERLTVTDLVLTGAPTLEDLGVVLTKLELYPVEFLRQYRKG 372 (391)
T ss_pred cccccCCcHHHHHHHhhhhee----ecCCCCCCCCCHHHhhheeehhhhcCCCCcHhhcCceeeecccccHHHHHHHhhc
Confidence 677777766666555433321 2222333348999999988777666667888999999999998888888888887
Q ss_pred CC
Q 047628 324 GP 325 (327)
Q Consensus 324 g~ 325 (327)
|+
T Consensus 373 ~~ 374 (391)
T KOG2865|consen 373 GR 374 (391)
T ss_pred cc
Confidence 65
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=303.52 Aligned_cols=297 Identities=15% Similarity=0.134 Sum_probs=221.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhH-HHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT-IKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-~~~~~~~~d~vi~ 82 (327)
..+|+|||||||||||++|+++|+++ ||+|++++|.+........ .++++++.+|+++.+. +.++++++|+|||
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~----~~~~~~~~gDl~d~~~~l~~~l~~~D~ViH 388 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLG----HPRFHFVEGDISIHSEWIEYHIKKCDVVLP 388 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcC----CCceEEEeccccCcHHHHHHHhcCCCEEEE
Confidence 45689999999999999999999986 7999999997654221111 1358899999998665 5778899999999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC---------C------C-----chHHHh
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS---------S------P-----SRVFST 138 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~---------~------~-----~~y~~~ 138 (327)
||+.... ..+...+++|+.++.+++++|++.+ ++|||+||..+++. . | +.|+.+
T Consensus 389 lAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~s 466 (660)
T PRK08125 389 LVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVS 466 (660)
T ss_pred CccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHH
Confidence 9987542 2345678899999999999999987 69999999766431 1 1 369999
Q ss_pred HHHHHHHHHhh----CCCeEEEecCeeecCCC-----------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHH
Q 047628 139 KAAAEEAVLRE----LPWATIMRPAAMIGTED-----------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 139 K~~~E~~~~~~----~~~~~i~r~~~~~G~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
|..+|++++.+ +++++++||+.+|||++ ..+..+...+..++.+.++|++++.++|+|++|+|++
T Consensus 467 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva~a 546 (660)
T PRK08125 467 KQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGIEA 546 (660)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHHHH
Confidence 99999999654 59999999999999964 2355666666667778888899999999999999999
Q ss_pred HHHHhhcCCC-CCCceEEecCCc-cccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHH
Q 047628 204 VTAALKDDGT-SMGKIYELGGPD-IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD 281 (327)
Q Consensus 204 ~~~~l~~~~~-~~~~~~~v~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
++.+++++.. ..+++||+++++ .+|++|+++.+.+.+|.+.....++...... . .+ ...+ . ..
T Consensus 547 ~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~--~-~~----~~~~-~-------~~ 611 (660)
T PRK08125 547 LFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFR--V-VE----SSSY-Y-------GK 611 (660)
T ss_pred HHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccccc--c-cc----cccc-c-------cc
Confidence 9999987531 147899999985 7999999999999998643222232110000 0 00 0000 0 00
Q ss_pred HHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 282 EINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
.... ......+. +++++.|||.|+ +++|+++++++|+++++
T Consensus 612 ~~~~-~~~~~~d~-~ka~~~LGw~P~~~lee~l~~~i~~~~~~~ 653 (660)
T PRK08125 612 GYQD-VEHRKPSI-RNARRLLDWEPKIDMQETIDETLDFFLRTV 653 (660)
T ss_pred cccc-ccccCCCh-HHHHHHhCCCCCCcHHHHHHHHHHHHHhcc
Confidence 0000 01122344 589899999998 99999999999999875
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=269.30 Aligned_cols=236 Identities=23% Similarity=0.302 Sum_probs=194.6
Q ss_pred EEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 11 TVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 11 lI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|||||+||+|++|+++|+++| ++|++++|.+.... ..+.. .+...++++|++|++++.++++++|+|||+|++.
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~---~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~ 77 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQK---SGVKEYIQGDITDPESLEEALEGVDVVFHTAAPV 77 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhc---ccceeEEEeccccHHHHHHHhcCCceEEEeCccc
Confidence 699999999999999999999 79999998876533 11221 1234489999999999999999999999999875
Q ss_pred ccc---CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-------------CC------chHHHhHHHHHHH
Q 047628 88 YET---RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------SP------SRVFSTKAAAEEA 145 (327)
Q Consensus 88 ~~~---~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------~~------~~y~~~K~~~E~~ 145 (327)
... ....++++|+.||++|+++|++.+ |++|||+||..+..+ .| +.|+.+|..+|++
T Consensus 78 ~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~ 156 (280)
T PF01073_consen 78 PPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKA 156 (280)
T ss_pred cccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHH
Confidence 432 345689999999999999999999 999999999876322 11 6899999999999
Q ss_pred HHhhC---------CCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc---C-
Q 047628 146 VLREL---------PWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD---D- 211 (327)
Q Consensus 146 ~~~~~---------~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---~- 211 (327)
+++.. +.++++||+.||||++. +.+.+...+..+......|++....+++|++|+|.+++.+++. +
T Consensus 157 V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~ 236 (280)
T PF01073_consen 157 VLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPG 236 (280)
T ss_pred HHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcccc
Confidence 98752 78999999999999875 4555666666665677778888999999999999999887652 2
Q ss_pred --CCCCCceEEecCCcccc-HHHHHHHHHHHhhcCCcc-ccCC
Q 047628 212 --GTSMGKIYELGGPDIFT-VHELAELMYDTIREYPHY-VKVP 250 (327)
Q Consensus 212 --~~~~~~~~~v~~~~~~s-~~el~~~i~~~~g~~~~~-~~~~ 250 (327)
....|+.|++++++++. +.|++..+.+.+|.+.+. +++|
T Consensus 237 ~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 237 KPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred ccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 22278999999999999 999999999999988765 6665
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=275.50 Aligned_cols=280 Identities=18% Similarity=0.172 Sum_probs=209.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh-hhcccC-CCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR-HLKLMG-DLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
.++|+|||||||||||++++++|+++|++|++++|+.+.... .+.... ...+++++.+|+++++.+.++++++|+|||
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 87 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFH 87 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEE
Confidence 346789999999999999999999999999999998654211 111111 113588899999999999999999999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC-CCC------------CC---------C-chHHHhH
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG-ASS------------SS---------P-SRVFSTK 139 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~-v~~------------~~---------~-~~y~~~K 139 (327)
+|+... ..+...+++|+.++.+++++|++.+ +++||++||.. ++. +. | +.|+.+|
T Consensus 88 ~A~~~~-~~~~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK 165 (342)
T PLN02214 88 TASPVT-DDPEQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGK 165 (342)
T ss_pred ecCCCC-CCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHH
Confidence 998753 3456778999999999999999998 99999999953 431 10 1 4799999
Q ss_pred HHHHHHHHhh----CCCeEEEecCeeecCCChh-----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE----LPWATIMRPAAMIGTEDRL-----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~----~~~~~i~r~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
..+|++++.+ +++++++||+.+|||+... +..+.... .+... .. +++.++|||++|+|++++.++++
T Consensus 166 ~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~-~g~~~-~~--~~~~~~~i~V~Dva~a~~~al~~ 241 (342)
T PLN02214 166 MVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYL-TGSAK-TY--ANLTQAYVDVRDVALAHVLVYEA 241 (342)
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHH-cCCcc-cC--CCCCcCeeEHHHHHHHHHHHHhC
Confidence 9999999764 6999999999999996431 22222222 23322 22 34568999999999999999998
Q ss_pred CCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCc
Q 047628 211 DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290 (327)
Q Consensus 211 ~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
+.. ++.||+++ +..++.|+++.+.+.++.. .++.+. .....+. ....
T Consensus 242 ~~~--~g~yn~~~-~~~~~~el~~~i~~~~~~~----~~~~~~--------------~~~~~~~------------~~~~ 288 (342)
T PLN02214 242 PSA--SGRYLLAE-SARHRGEVVEILAKLFPEY----PLPTKC--------------KDEKNPR------------AKPY 288 (342)
T ss_pred ccc--CCcEEEec-CCCCHHHHHHHHHHHCCCC----CCCCCC--------------ccccCCC------------CCcc
Confidence 754 45899987 5789999999999998521 111000 0000000 1122
Q ss_pred ccCCCcccccccCCccccccCccHHHHHHHhhCCC
Q 047628 291 IVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 291 ~~~~~~~~~~~lg~~p~~~~~~l~~~~~~~~~~g~ 325 (327)
.+++ +|++ +|||+|++++|+++++++|+++.|+
T Consensus 289 ~~d~-~k~~-~LG~~p~~lee~i~~~~~~~~~~~~ 321 (342)
T PLN02214 289 KFTN-QKIK-DLGLEFTSTKQSLYDTVKSLQEKGH 321 (342)
T ss_pred ccCc-HHHH-HcCCcccCHHHHHHHHHHHHHHcCC
Confidence 3454 4775 5999999999999999999999886
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=276.61 Aligned_cols=289 Identities=18% Similarity=0.195 Sum_probs=215.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCCC-CchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGCE-DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~ 83 (327)
|+|||||||||||++++++|+++|++ |+++.|... .............+++++.+|++|.+++.+++++ +|+||||
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 58999999999999999999999975 655655331 1111121111113578899999999999999864 8999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHc---------CCcceEEEEeccCCCCC-------------------C
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEH---------GGIMRFIQISCLGASSS-------------------S 131 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~---------~~v~~~v~~Ss~~v~~~-------------------~ 131 (327)
|+.... ..+....++|+.++.+++++|++. + +++||++||..+++. .
T Consensus 81 A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~ 159 (352)
T PRK10084 81 AAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKN-AFRFHHISTDEVYGDLPHPDEVENSEELPLFTETT 159 (352)
T ss_pred CcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhcccccccccc-ceeEEEecchhhcCCCCccccccccccCCCccccC
Confidence 987432 235678999999999999999874 3 679999999765432 1
Q ss_pred ---C-chHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 132 ---P-SRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 132 ---~-~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
| +.|+.+|..+|.+++.+ +++++++|++.+|||++ .++..+...+..++.+++++++++.++++|++|+
T Consensus 160 ~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~ 239 (352)
T PRK10084 160 AYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (352)
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHH
Confidence 1 78999999999988754 58999999999999974 3455565666666678888899999999999999
Q ss_pred HHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCH
Q 047628 201 AAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL 280 (327)
Q Consensus 201 a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (327)
|+++..+++.+. .+++||+++++.+|+.|+++.+++.+|...+.. .+.. ........ .|.
T Consensus 240 a~a~~~~l~~~~--~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~-~~~~---------~~~~~~~~--~~~------ 299 (352)
T PRK10084 240 ARALYKVVTEGK--AGETYNIGGHNEKKNLDVVLTICDLLDEIVPKA-TSYR---------EQITYVAD--RPG------ 299 (352)
T ss_pred HHHHHHHHhcCC--CCceEEeCCCCcCcHHHHHHHHHHHhccccccc-cchh---------hhcccccc--CCC------
Confidence 999999998654 378999999999999999999999998643211 1100 00000000 000
Q ss_pred HHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 281 DEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
......+|. +++++.|||+|+ +++++++++++|++++
T Consensus 300 -----~~~~~~~d~-~k~~~~lg~~p~~~l~~~l~~~~~~~~~~ 337 (352)
T PRK10084 300 -----HDRRYAIDA-SKISRELGWKPQETFESGIRKTVEWYLAN 337 (352)
T ss_pred -----CCceeeeCH-HHHHHHcCCCCcCCHHHHHHHHHHHHHhC
Confidence 011223444 588889999997 9999999999999875
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=299.95 Aligned_cols=285 Identities=19% Similarity=0.234 Sum_probs=221.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCC-chhhhcccCCCCCeeEEeeCCCChhHHHHHh--ccccEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDDNTIKATM--AKANVV 80 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--~~~d~v 80 (327)
.+|+|||||||||||++|+++|+++ +++|++++|.... ....+......++++++.+|+++.+.+..++ .++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 4589999999999999999999997 6899999885311 1111111111246899999999998888766 579999
Q ss_pred EEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC------------C---C-chHHHhHH
Q 047628 81 INLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS------------S---P-SRVFSTKA 140 (327)
Q Consensus 81 i~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~------------~---~-~~y~~~K~ 140 (327)
||||+.... ..+..+.++|+.++.+++++|++.+.+++|||+||..+++. . | ++|+.+|.
T Consensus 85 iHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~ 164 (668)
T PLN02260 85 MHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKA 164 (668)
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHH
Confidence 999997543 23356788999999999999999865789999999766431 1 1 67999999
Q ss_pred HHHHHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 141 AAEEAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 141 ~~E~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+|++++.+ +++++++||+.+||+++ .+++.+...+..++.++++|++++.++|+|++|+|+++..+++.+..
T Consensus 165 ~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~~~ 244 (668)
T PLN02260 165 GAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKGEV 244 (668)
T ss_pred HHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcCCC
Confidence 999999764 59999999999999975 35667777777778888889999999999999999999999987654
Q ss_pred CCCceEEecCCccccHHHHHHHHHHHhhcCCcc--ccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcc
Q 047628 214 SMGKIYELGGPDIFTVHELAELMYDTIREYPHY--VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTI 291 (327)
Q Consensus 214 ~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (327)
+++||+++++.+|+.|+++.+++.+|.+... ...+ . .| .. .....
T Consensus 245 --~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~----------------~----~p----~~-------~~~~~ 291 (668)
T PLN02260 245 --GHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVE----------------N----RP----FN-------DQRYF 291 (668)
T ss_pred --CCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecC----------------C----CC----CC-------cceee
Confidence 6899999999999999999999999965431 1111 0 00 00 11123
Q ss_pred cCCCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 292 VSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 292 ~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
.++ +|++ .|||+|+ +++|+++++++||++++.
T Consensus 292 ~d~-~k~~-~lGw~p~~~~~egl~~~i~w~~~~~~ 324 (668)
T PLN02260 292 LDD-QKLK-KLGWQERTSWEEGLKKTMEWYTSNPD 324 (668)
T ss_pred cCH-HHHH-HcCCCCCCCHHHHHHHHHHHHHhChh
Confidence 344 4764 6999997 999999999999998754
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=276.69 Aligned_cols=287 Identities=15% Similarity=0.142 Sum_probs=216.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
+++|+|||||||||||+++++.|+++|++|++++|+...............+++++.+|+++.+++.+++++ +|+|||
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih 81 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFH 81 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEE
Confidence 346899999999999999999999999999999998765332211111113577889999999999999875 599999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----------C---C-chHHHhHHHHHH
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS----------S---P-SRVFSTKAAAEE 144 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~----------~---~-~~y~~~K~~~E~ 144 (327)
+|+.... ..+...+++|+.++.+++++++..+.+++||++||..+++. . | ++|+.+|..+|.
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~ 161 (349)
T TIGR02622 82 LAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAEL 161 (349)
T ss_pred CCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHH
Confidence 9986422 23456789999999999999987653679999999765431 1 1 689999999999
Q ss_pred HHHhh-----------CCCeEEEecCeeecCCC----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 145 AVLRE-----------LPWATIMRPAAMIGTED----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 145 ~~~~~-----------~~~~~i~r~~~~~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+++.+ +++++++||+.+|||++ .+++.+...+..++.+.+ +++++.++|+|++|+|++++.+++
T Consensus 162 ~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~g~~~rd~i~v~D~a~a~~~~~~ 240 (349)
T TIGR02622 162 VIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII-RNPDATRPWQHVLEPLSGYLLLAE 240 (349)
T ss_pred HHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE-CCCCcccceeeHHHHHHHHHHHHH
Confidence 98653 68999999999999963 456777777776666665 578899999999999999998887
Q ss_pred cC----CCCCCceEEecCC--ccccHHHHHHHHHHHhhc-CCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHH
Q 047628 210 DD----GTSMGKIYELGGP--DIFTVHELAELMYDTIRE-YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE 282 (327)
Q Consensus 210 ~~----~~~~~~~~~v~~~--~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (327)
.. .. .+++||++++ +++|..|+++.+.+..+. ++.+...+. .. .+. +
T Consensus 241 ~~~~~~~~-~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~--------------~~----~~~------~- 294 (349)
T TIGR02622 241 KLFTGQAE-FAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSD--------------LN----HPH------E- 294 (349)
T ss_pred HHhhcCcc-ccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccC--------------CC----CCc------c-
Confidence 52 12 3579999974 689999999999987653 222211100 00 000 0
Q ss_pred HHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 283 INAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
......+. +++++.|||+|+ +++++++++++|+++.
T Consensus 295 ----~~~~~~d~-~k~~~~lgw~p~~~l~~gi~~~i~w~~~~ 331 (349)
T TIGR02622 295 ----ARLLKLDS-SKARTLLGWHPRWGLEEAVSRTVDWYKAW 331 (349)
T ss_pred ----cceeecCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 11123344 588888999999 9999999999999864
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=275.09 Aligned_cols=291 Identities=20% Similarity=0.186 Sum_probs=217.9
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh---hhcccC--CCCCeeEEeeCCCChhHHHHHhc--
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMG--DLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~---~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
|+|++++|+|||||||+|++++++|+++|++|++++|....... ...... ...+++++.+|+++++.+.++++
T Consensus 1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~ 80 (352)
T PLN02240 1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST 80 (352)
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC
Confidence 34556899999999999999999999999999999876543211 111110 01357889999999999998886
Q ss_pred cccEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC---------CC----chHHHh
Q 047628 76 KANVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS---------SP----SRVFST 138 (327)
Q Consensus 76 ~~d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~---------~~----~~y~~~ 138 (327)
++|+|||||+.... ..+...+++|+.++.+++++|++.+ +++||++||.+++.. .+ +.|+.+
T Consensus 81 ~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~s 159 (352)
T PLN02240 81 RFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRT 159 (352)
T ss_pred CCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHH
Confidence 58999999986432 2345678999999999999999988 899999999766532 11 689999
Q ss_pred HHHHHHHHHhh-----CCCeEEEecCeeecCCC------------hhHHHHHHHHhhc--Cceeeec------CCCceec
Q 047628 139 KAAAEEAVLRE-----LPWATIMRPAAMIGTED------------RLLNKWAQFVKKF--NFFPLFG------DGSTRIQ 193 (327)
Q Consensus 139 K~~~E~~~~~~-----~~~~~i~r~~~~~G~~~------------~~~~~~~~~~~~~--~~~~~~~------~~~~~~~ 193 (327)
|..+|++++.+ +++++++|++.+||+.. ..+..+...+..+ +.+.+.| ++.+.++
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 239 (352)
T PLN02240 160 KLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRD 239 (352)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEe
Confidence 99999998753 37889999999988631 1122233333333 2444544 6788999
Q ss_pred ceeHHHHHHHHHHHhhcC----CCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCC
Q 047628 194 PVYVVDVAAAVTAALKDD----GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP 269 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~----~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (327)
|+|++|+|++++.+++.. .. .+++||+++++.+|++|+++.+++.+|.+.++...+.
T Consensus 240 ~i~v~D~a~a~~~a~~~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~------------------ 300 (352)
T PLN02240 240 YIHVMDLADGHIAALRKLFTDPDI-GCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPR------------------ 300 (352)
T ss_pred eEEHHHHHHHHHHHHhhhhhccCC-CCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCC------------------
Confidence 999999999999888642 23 4689999999999999999999999997665544331
Q ss_pred CCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCCCC
Q 047628 270 FPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGPKF 327 (327)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~~~ 327 (327)
.+. + ......+. +|+++.|||+|+ +++++++++++|++++++.+
T Consensus 301 --~~~------~-----~~~~~~d~-~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~~~ 345 (352)
T PLN02240 301 --RPG------D-----AEEVYAST-EKAEKELGWKAKYGIDEMCRDQWNWASKNPYGY 345 (352)
T ss_pred --CCC------C-----hhhhhcCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHhCcccc
Confidence 000 0 01112343 588899999999 99999999999999998753
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-37 Score=260.01 Aligned_cols=283 Identities=19% Similarity=0.188 Sum_probs=211.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh--hhcccC-CCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR--HLKLMG-DLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
.+++|+|||||||||+++++.||++||+|++.+|+++.... ++..+. ..++++.+.+|+.+++++.+++++||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 46899999999999999999999999999999999987433 344333 234699999999999999999999999999
Q ss_pred ccccccccC---cchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC-C---CC--------------------chH
Q 047628 83 LIGREYETR---NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS-S---SP--------------------SRV 135 (327)
Q Consensus 83 ~a~~~~~~~---~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~-~---~~--------------------~~y 135 (327)
+|.+..... +.+..+..++|+.|++++|++...|+|+||+||+.+-. + .. ..|
T Consensus 85 ~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y 164 (327)
T KOG1502|consen 85 TASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWY 164 (327)
T ss_pred eCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHH
Confidence 999865432 23788999999999999999987799999999975421 1 00 479
Q ss_pred HHhHHHHHHHHHhh----CCCeEEEecCeeecCCChh-----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE----LPWATIMRPAAMIGTEDRL-----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 136 ~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
..+|..+|+...+. +++.+.+-|+.|+||.-.. .......+. +..-.. ......++|++|+|.+++.
T Consensus 165 ~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~-G~~~~~---~n~~~~~VdVrDVA~AHv~ 240 (327)
T KOG1502|consen 165 ALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIK-GLAETY---PNFWLAFVDVRDVALAHVL 240 (327)
T ss_pred HHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHh-cccccC---CCCceeeEeHHHHHHHHHH
Confidence 99999999998776 4999999999999995321 222233332 322221 2233459999999999999
Q ss_pred HhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhh
Q 047628 207 ALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAY 286 (327)
Q Consensus 207 ~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
+++++.. ++.|.+.+ +..++.|+++.+.+.+.... +|. .. .+..+..
T Consensus 241 a~E~~~a--~GRyic~~-~~~~~~ei~~~l~~~~P~~~----ip~---------------------~~-----~~~~~~~ 287 (327)
T KOG1502|consen 241 ALEKPSA--KGRYICVG-EVVSIKEIADILRELFPDYP----IPK---------------------KN-----AEEHEGF 287 (327)
T ss_pred HHcCccc--CceEEEec-CcccHHHHHHHHHHhCCCCC----CCC---------------------CC-----Ccccccc
Confidence 9999997 56898888 55669999999998874322 220 00 0000001
Q ss_pred hcCcccCCCcccccccCCccccccCccHHHHHHHhhCCCC
Q 047628 287 TSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 287 ~~~~~~~~~~~~~~~lg~~p~~~~~~l~~~~~~~~~~g~~ 326 (327)
.....+++ +|.+...|++.++++|.+.++++++++.|..
T Consensus 288 ~~~~~~~~-~k~k~lg~~~~~~l~e~~~dt~~sl~~~~~l 326 (327)
T KOG1502|consen 288 LTSFKVSS-EKLKSLGGFKFRPLEETLSDTVESLREKGLL 326 (327)
T ss_pred cccccccc-HHHHhcccceecChHHHHHHHHHHHHHhcCC
Confidence 11123444 4775555599999999999999999998764
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-37 Score=277.89 Aligned_cols=281 Identities=19% Similarity=0.187 Sum_probs=213.9
Q ss_pred cCCcEEEEE----cCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh-------hcccCCCCCeeEEeeCCCChhHHHHH
Q 047628 5 YSGIIATVF----GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH-------LKLMGDLGQIVPMKFNPRDDNTIKAT 73 (327)
Q Consensus 5 ~~~~~ilI~----GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-------~~~~~~~~~v~~~~~Dl~~~~~~~~~ 73 (327)
.++++|||| |||||||++|+++|+++||+|++++|+....... +..+. ..+++++.+|+.+ +.++
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKTVWGDPAD---VKSK 125 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceEEEecHHH---HHhh
Confidence 345789999 9999999999999999999999999987542110 00110 1248889999876 3344
Q ss_pred h--ccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC----------chHHHhHHH
Q 047628 74 M--AKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP----------SRVFSTKAA 141 (327)
Q Consensus 74 ~--~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~----------~~y~~~K~~ 141 (327)
+ .++|+|||+++. +..++.+++++|++.| +++|||+||.+++.... .++. +|..
T Consensus 126 ~~~~~~d~Vi~~~~~------------~~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~ 191 (378)
T PLN00016 126 VAGAGFDVVYDNNGK------------DLDEVEPVADWAKSPG-LKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLE 191 (378)
T ss_pred hccCCccEEEeCCCC------------CHHHHHHHHHHHHHcC-CCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHH
Confidence 3 468999999753 2457889999999999 99999999998875321 1222 7999
Q ss_pred HHHHHHhhCCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceE
Q 047628 142 AEEAVLRELPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIY 219 (327)
Q Consensus 142 ~E~~~~~~~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~ 219 (327)
+|+++++.+++++++||+.+||++.. ....+...+..++.+++++++.+.++++|++|+|++++.+++++.. .+++|
T Consensus 192 ~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~-~~~~y 270 (378)
T PLN00016 192 VEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPKA-AGQIF 270 (378)
T ss_pred HHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCccc-cCCEE
Confidence 99999998999999999999998642 3445566666677788888899999999999999999999998765 57899
Q ss_pred EecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccc
Q 047628 220 ELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299 (327)
Q Consensus 220 ~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (327)
|+++++.+|+.|+++.+.+.+|.+..+...+......... .. .|. + ......+. ++++
T Consensus 271 ni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~------~~----~p~-----~------~~~~~~d~-~ka~ 328 (378)
T PLN00016 271 NIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAK------KA----FPF-----R------DQHFFASP-RKAK 328 (378)
T ss_pred EecCCCccCHHHHHHHHHHHhCCCCceeecCccccCcccc------cc----ccc-----c------ccccccCH-HHHH
Confidence 9999999999999999999999877655444221100000 00 010 0 01122344 5888
Q ss_pred cccCCccc-cccCccHHHHHHHhhCCCC
Q 047628 300 QDLGIVPH-KLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 300 ~~lg~~p~-~~~~~l~~~~~~~~~~g~~ 326 (327)
+.|||+|+ +++|+++++++||++.|+.
T Consensus 329 ~~LGw~p~~~l~egl~~~~~~~~~~~~~ 356 (378)
T PLN00016 329 EELGWTPKFDLVEDLKDRYELYFGRGRD 356 (378)
T ss_pred HhcCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999998 9999999999999998863
|
|
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-37 Score=263.78 Aligned_cols=310 Identities=21% Similarity=0.210 Sum_probs=255.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+.+++||||+||+|+||+++|++++ .+|++++..+......-...+ ....++.+++|+++...+..+++++ .|+||
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~ 82 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHC 82 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEe
Confidence 5689999999999999999999998 899999988753211111110 1257999999999999999999999 88888
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC----------CCCC------chHHHhHHHHH
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS----------SSSP------SRVFSTKAAAE 143 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~----------~~~~------~~y~~~K~~~E 143 (327)
|+.... ..+...+++|+.+|.+++++|++.| |+++||+||..|. |+.| ++|+.+|..+|
T Consensus 83 aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE 161 (361)
T KOG1430|consen 83 AASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAE 161 (361)
T ss_pred ccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHH
Confidence 765432 2466789999999999999999999 9999999998761 2222 68999999999
Q ss_pred HHHHhhC----CCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh----cCCCC
Q 047628 144 EAVLREL----PWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK----DDGTS 214 (327)
Q Consensus 144 ~~~~~~~----~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~----~~~~~ 214 (327)
+++++.. +.++++||+.||||++. .++.+...++.+......|+++...+++++..++.+.+.+.. .....
T Consensus 162 ~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~~~~ 241 (361)
T KOG1430|consen 162 KLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKSPSV 241 (361)
T ss_pred HHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeeccccccceEEechhHHHHHHHHHHHHhcCCcc
Confidence 9999875 78999999999999875 567777778878777777888899999999999888875443 22223
Q ss_pred CCceEEecCCccccHHHHHHHHHHHhhcCCc-cccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccC
Q 047628 215 MGKIYELGGPDIFTVHELAELMYDTIREYPH-YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (327)
.|+.|+|++++++...+.+..+.+.+|...+ ....|.++...++.+.+.....++. ..|++++..++.+.....++
T Consensus 242 ~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p---~~p~lt~~~v~~~~~~~~f~ 318 (361)
T KOG1430|consen 242 NGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRP---YQPILTRFRVALLGVTRTFS 318 (361)
T ss_pred CceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccC---CCCCcChhheeeeccccccC
Confidence 7999999999998888888899999998877 7889999999999999988887653 45558899999888777777
Q ss_pred CCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 294 DNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 294 ~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
.. |+++.|||.|. ++++++.+++.|+..
T Consensus 319 ~~-kA~~~lgY~P~~~~~e~~~~~~~~~~~ 347 (361)
T KOG1430|consen 319 IE-KAKRELGYKPLVSLEEAIQRTIHWVAS 347 (361)
T ss_pred HH-HHHHhhCCCCcCCHHHHHHHHHHHHhh
Confidence 75 99999999997 999999999988654
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=274.06 Aligned_cols=293 Identities=15% Similarity=0.095 Sum_probs=210.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccC------CCCCeeEEeeCCCChhHHHHHhcc--cc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMG------DLGQIVPMKFNPRDDNTIKATMAK--AN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~------~~~~v~~~~~Dl~~~~~~~~~~~~--~d 78 (327)
++|||||||||||++|+++|++.|++|++++|+++.. ...+.... ...+++++.+|++|.+.+.+++++ +|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999986431 11111110 013588999999999999999985 69
Q ss_pred EEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcc---eEEEEeccCCCCC---------CC----chHHHh
Q 047628 79 VVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIM---RFIQISCLGASSS---------SP----SRVFST 138 (327)
Q Consensus 79 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~---~~v~~Ss~~v~~~---------~~----~~y~~~ 138 (327)
+|||+|+.... ..+....++|+.++.+++++|++.+ ++ +|||+||..+++. .| ++|+.+
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s 159 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAA 159 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHH
Confidence 99999997432 2234566778999999999999987 53 8999999766542 11 789999
Q ss_pred HHHHHHHHHhh----CCCeEEEecCeeecCCC--hh----HHHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHHH
Q 047628 139 KAAAEEAVLRE----LPWATIMRPAAMIGTED--RL----LNKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 139 K~~~E~~~~~~----~~~~~i~r~~~~~G~~~--~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|.++|.+++.+ ++++++.|+..+|||+. .+ +..+...+..++ ...++|++++.++|+|++|+|++++.+
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~ 239 (343)
T TIGR01472 160 KLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLM 239 (343)
T ss_pred HHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHH
Confidence 99999998664 58888899988998853 22 233333344343 344568899999999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccC-------ChHHHHHhhhHHHHHhhhCCCCCCCCCCCCH
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKV-------PFPVAKAVAMPREILLKKVPFPLPRPGLFNL 280 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (327)
++++. +++||+++++.+|+.|+++.+.+.+|.+..+... +.+..+.... +.. .+. ..
T Consensus 240 ~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~----~~ 303 (343)
T TIGR01472 240 LQQDK---PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVE--------IDP-RYF----RP 303 (343)
T ss_pred HhcCC---CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEE--------eCc-ccc----CC
Confidence 98653 3589999999999999999999999865432110 0000000000 000 000 00
Q ss_pred HHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 281 DEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
. .......+.+++++.|||+|+ +++|++++++++|++
T Consensus 304 ~-----~~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 304 T-----EVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred C-----ccchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 0 011112234589899999998 999999999999885
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=269.91 Aligned_cols=279 Identities=18% Similarity=0.150 Sum_probs=206.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh--hhccc-CCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR--HLKLM-GDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
.++|||||||||||++++++|+++|++|++++|+...... .+... ...++++++.+|+++++.+.++++++|+|||+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~ 83 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFHT 83 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEEe
Confidence 4789999999999999999999999999999998654221 11111 11246889999999999999999999999999
Q ss_pred cccccc--cCcc-hhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccCC--CCC---------------CC-------chH
Q 047628 84 IGREYE--TRNY-SFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGA--SSS---------------SP-------SRV 135 (327)
Q Consensus 84 a~~~~~--~~~~-~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~v--~~~---------------~~-------~~y 135 (327)
|+.... ..+. ..+++|+.++.+++++|++. + +++|||+||.++ +.. .| +.|
T Consensus 84 A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 162 (322)
T PLN02662 84 ASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWY 162 (322)
T ss_pred CCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchH
Confidence 987432 2232 67889999999999999987 7 899999999652 321 01 479
Q ss_pred HHhHHHHHHHHHh----hCCCeEEEecCeeecCCCh----hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLR----ELPWATIMRPAAMIGTEDR----LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 136 ~~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+.+|..+|++++. .+++++++||+.+|||... ....+...+..+.. . .+++.++|+|++|+|++++.+
T Consensus 163 ~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~i~v~Dva~a~~~~ 238 (322)
T PLN02662 163 VLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ--T--FPNASYRWVDVRDVANAHIQA 238 (322)
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc--c--CCCCCcCeEEHHHHHHHHHHH
Confidence 9999999998764 3699999999999999642 22222322332322 1 234678999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
++.+.. ++.||+++ +.+|++|+++.+.+.++.. .++.+. .+. .+. .
T Consensus 239 ~~~~~~--~~~~~~~g-~~~s~~e~~~~i~~~~~~~----~~~~~~--------------~~~-~~~------------~ 284 (322)
T PLN02662 239 FEIPSA--SGRYCLVE-RVVHYSEVVKILHELYPTL----QLPEKC--------------ADD-KPY------------V 284 (322)
T ss_pred hcCcCc--CCcEEEeC-CCCCHHHHHHHHHHHCCCC----CCCCCC--------------CCc-ccc------------c
Confidence 998764 34788875 7899999999999987531 112000 000 000 1
Q ss_pred cCcccCCCcccccccCCccccccCccHHHHHHHhhCCCC
Q 047628 288 SDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 288 ~~~~~~~~~~~~~~lg~~p~~~~~~l~~~~~~~~~~g~~ 326 (327)
.....++ +|++ .|||++++++++++++++||+++||.
T Consensus 285 ~~~~~d~-~k~~-~lg~~~~~~~~~l~~~~~~~~~~~~~ 321 (322)
T PLN02662 285 PTYQVSK-EKAK-SLGIEFIPLEVSLKDTVESLKEKGFL 321 (322)
T ss_pred cccccCh-HHHH-HhCCccccHHHHHHHHHHHHHHcCCC
Confidence 1234555 4776 59999999999999999999999984
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=269.85 Aligned_cols=283 Identities=19% Similarity=0.165 Sum_probs=205.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh--hcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH--LKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+++++||||||+||||++|+++|+++|++|+++.|+.+..... .......++++++.+|++|++.+.++++++|+|||
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 86 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVFH 86 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEEE
Confidence 4568999999999999999999999999999999986543211 11111113588999999999999999999999999
Q ss_pred ccccccc--cCcc-hhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-------------------------CC-c
Q 047628 83 LIGREYE--TRNY-SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------------------SP-S 133 (327)
Q Consensus 83 ~a~~~~~--~~~~-~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------------------~~-~ 133 (327)
+|+.... ..+. .++++|+.++.++++++++.+++++||++||..++.. .| +
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~ 166 (338)
T PLN00198 87 VATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTW 166 (338)
T ss_pred eCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccc
Confidence 9986432 2222 3568999999999999988633889999999765431 12 5
Q ss_pred hHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCCh-----hHHHHHHHHhhcCceeeec-CCC----ceecceeHHH
Q 047628 134 RVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTEDR-----LLNKWAQFVKKFNFFPLFG-DGS----TRIQPVYVVD 199 (327)
Q Consensus 134 ~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~-~~~----~~~~~i~~~D 199 (327)
+|+.+|..+|.+++.+ +++++++||+.+|||++. .+. +...+..++.+.+.| ++. ..++|+|++|
T Consensus 167 ~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D 245 (338)
T PLN00198 167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSISITHVED 245 (338)
T ss_pred hhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcceeEHHH
Confidence 6999999999988763 599999999999999642 121 222233344444444 222 2379999999
Q ss_pred HHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhc-CCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCC
Q 047628 200 VAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIRE-YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLF 278 (327)
Q Consensus 200 ~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (327)
+|++++.+++.+.. ++.|+.+ ++.+|+.|+++.+.+.++. +.+....+ .|.
T Consensus 246 ~a~a~~~~~~~~~~--~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~---------------------~~~---- 297 (338)
T PLN00198 246 VCRAHIFLAEKESA--SGRYICC-AANTSVPELAKFLIKRYPQYQVPTDFGD---------------------FPS---- 297 (338)
T ss_pred HHHHHHHHhhCcCc--CCcEEEe-cCCCCHHHHHHHHHHHCCCCCCCccccc---------------------cCC----
Confidence 99999999987654 3468544 4779999999999988753 11110000 000
Q ss_pred CHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCCC
Q 047628 279 NLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~~ 326 (327)
......+. +++++ +||+|+ +++|+++++++||++.||-
T Consensus 298 --------~~~~~~~~-~k~~~-~G~~p~~~l~~gi~~~~~~~~~~~~~ 336 (338)
T PLN00198 298 --------KAKLIISS-EKLIS-EGFSFEYGIEEIYDQTVEYFKAKGLL 336 (338)
T ss_pred --------CCccccCh-HHHHh-CCceecCcHHHHHHHHHHHHHHcCCC
Confidence 01123344 47765 699999 9999999999999999873
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-37 Score=267.76 Aligned_cols=267 Identities=18% Similarity=0.182 Sum_probs=203.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~ 85 (327)
|+||||||+||||++|+++|+++| +|++++|... .+.+|++|++.+.++++ ++|+|||||+
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa 63 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKIRPDVIVNAAA 63 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhcCCCEEEECCc
Confidence 589999999999999999999999 7998887531 23579999999999988 4899999999
Q ss_pred ccccc----CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC---------CC---C-chHHHhHHHHHHHHHh
Q 047628 86 REYET----RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS---------SS---P-SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 86 ~~~~~----~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~---------~~---~-~~y~~~K~~~E~~~~~ 148 (327)
..... .+...+.+|+.++.+++++|++.| + +|||+||..++. +. | +.|+.+|..+|++++.
T Consensus 64 ~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~ 141 (299)
T PRK09987 64 HTAVDKAESEPEFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGTGDIPWQETDATAPLNVYGETKLAGEKALQE 141 (299)
T ss_pred cCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 86432 344567899999999999999998 5 799999976542 11 2 7899999999999999
Q ss_pred hCCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecC--CCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCc
Q 047628 149 ELPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGD--GSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225 (327)
Q Consensus 149 ~~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~ 225 (327)
+..+++++|++++|||++ +++..+...+.+++.++++++ +.+.+.+.+.+|+++++..++..+.. +++||+++++
T Consensus 142 ~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~--~giyni~~~~ 219 (299)
T PRK09987 142 HCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEV--AGLYHLVASG 219 (299)
T ss_pred hCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCC--CCeEEeeCCC
Confidence 888999999999999864 566777777777778888877 55555556677788888877765543 4699999999
Q ss_pred cccHHHHHHHHHHHhhc---CC---ccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccc
Q 047628 226 IFTVHELAELMYDTIRE---YP---HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299 (327)
Q Consensus 226 ~~s~~el~~~i~~~~g~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (327)
.+|+.|+++.+.+.++. +. .+.+++... ++...+. -....++. +|++
T Consensus 220 ~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~--------------~~~~~~r------------p~~~~ld~-~k~~ 272 (299)
T PRK09987 220 TTTWHDYAALVFEEARKAGITLALNKLNAVPTSA--------------YPTPARR------------PHNSRLNT-EKFQ 272 (299)
T ss_pred CccHHHHHHHHHHHHHhcCCCcCcCeeeecchhh--------------cCCCCCC------------CCcccCCH-HHHH
Confidence 99999999999886543 22 122332100 0000000 01223444 5888
Q ss_pred cccCCccccccCccHHHHHHHhh
Q 047628 300 QDLGIVPHKLKGYPTEYLIWYRK 322 (327)
Q Consensus 300 ~~lg~~p~~~~~~l~~~~~~~~~ 322 (327)
+.|||+|++|+++++++++.+-.
T Consensus 273 ~~lg~~~~~~~~~l~~~~~~~~~ 295 (299)
T PRK09987 273 QNFALVLPDWQVGVKRMLTELFT 295 (299)
T ss_pred HHhCCCCccHHHHHHHHHHHHhh
Confidence 88999999999999999987643
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=268.44 Aligned_cols=284 Identities=18% Similarity=0.190 Sum_probs=218.0
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCC-chhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINL 83 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~ 83 (327)
+|+||||||+||++++++|++.| ++|++++|.... ....+......++++++.+|+++++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 789998874321 111111111123688899999999999999987 8999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEeccCCCCCC-------------C-chHHHhHHHHHH
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCLGASSSS-------------P-SRVFSTKAAAEE 144 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~~v~~~~-------------~-~~y~~~K~~~E~ 144 (327)
|+.... ..+..+.++|+.++.+++++|++.+ .+ ++|++||..++... | +.|+.+|..+|.
T Consensus 81 a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 159 (317)
T TIGR01181 81 AAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYW-HEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDH 159 (317)
T ss_pred ccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHH
Confidence 987432 2345678899999999999999875 33 89999997654311 1 579999999999
Q ss_pred HHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 145 AVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 145 ~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
+++.+ +++++++||+.+||+.. .+++.+...+..++.+++++++++.++++|++|+|+++..++++.. .++
T Consensus 160 ~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~--~~~ 237 (317)
T TIGR01181 160 LVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR--VGE 237 (317)
T ss_pred HHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC--CCc
Confidence 88753 59999999999999863 4566666667767778888889999999999999999999998654 478
Q ss_pred eEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcc
Q 047628 218 IYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297 (327)
Q Consensus 218 ~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (327)
+||+++++.+|+.|+++.+.+.+|.+....... .. .+ .. ......++ ++
T Consensus 238 ~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~---------------~~----~~------~~-----~~~~~~~~-~k 286 (317)
T TIGR01181 238 TYNIGGGNERTNLEVVETILELLGKDEDLITHV---------------ED----RP------GH-----DRRYAIDA-SK 286 (317)
T ss_pred eEEeCCCCceeHHHHHHHHHHHhCCCccccccc---------------CC----Cc------cc-----hhhhcCCH-HH
Confidence 999999999999999999999998643221110 00 00 00 01123344 48
Q ss_pred cccccCCccc-cccCccHHHHHHHhhCCCC
Q 047628 298 TFQDLGIVPH-KLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 298 ~~~~lg~~p~-~~~~~l~~~~~~~~~~g~~ 326 (327)
.++.|||.|+ +++++++++++||+++++-
T Consensus 287 ~~~~lG~~p~~~~~~~i~~~~~~~~~~~~~ 316 (317)
T TIGR01181 287 IKRELGWAPKYTFEEGLRKTVQWYLDNEWW 316 (317)
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHHhccCC
Confidence 8889999996 9999999999999998763
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=268.99 Aligned_cols=281 Identities=17% Similarity=0.169 Sum_probs=210.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh---cccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL---KLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~ 82 (327)
|+|||||||||||+++++.|+++|++|++++|..+.....+ .... ..++.++.+|++|++.+.++++ ++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh 79 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALLTEILHDHAIDTVIH 79 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhc-CCCceEEEccCCCHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999999999999987543322211 1111 1346788999999999998886 5899999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC--------------CCchHHHhHHHHHH
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS--------------SPSRVFSTKAAAEE 144 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~--------------~~~~y~~~K~~~E~ 144 (327)
+|+.... ..+...+.+|+.++.+++++|++.+ +++||++||.+++.. ..+.|+.+|..+|+
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~ 158 (338)
T PRK10675 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQ 158 (338)
T ss_pred CCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHH
Confidence 9986532 2335678899999999999999998 899999999766421 12789999999999
Q ss_pred HHHhh-----CCCeEEEecCeeecCC--------C-----hhHHHHHHHHhhc-Cceeeec------CCCceecceeHHH
Q 047628 145 AVLRE-----LPWATIMRPAAMIGTE--------D-----RLLNKWAQFVKKF-NFFPLFG------DGSTRIQPVYVVD 199 (327)
Q Consensus 145 ~~~~~-----~~~~~i~r~~~~~G~~--------~-----~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~i~~~D 199 (327)
+++++ +++++++|++.+||+. . .++..+....... ..+.++| ++.+.++++|++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D 238 (338)
T PRK10675 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_pred HHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHH
Confidence 99764 4789999998888862 1 1223333322221 2344444 5678899999999
Q ss_pred HHHHHHHHhhcC--CCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCC
Q 047628 200 VAAAVTAALKDD--GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL 277 (327)
Q Consensus 200 ~a~~~~~~l~~~--~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (327)
+|++++.+++.. .. .+++||+++++.+|+.|+++.+.+.+|.+..+...|. .+
T Consensus 239 ~a~~~~~~~~~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------~~---- 293 (338)
T PRK10675 239 LADGHVAAMEKLANKP-GVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPR--------------------RE---- 293 (338)
T ss_pred HHHHHHHHHHhhhccC-CCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCC--------------------CC----
Confidence 999999999852 22 3579999999999999999999999997765443331 00
Q ss_pred CCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 278 FNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.+. .....++ +|+++.+||+|+ +++++++++++|++++
T Consensus 294 --~~~-----~~~~~~~-~k~~~~lg~~p~~~~~~~~~~~~~~~~~~ 332 (338)
T PRK10675 294 --GDL-----PAYWADA-SKADRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_pred --Cch-----hhhhcCH-HHHHHHhCCCCcCcHHHHHHHHHHHHHhh
Confidence 000 0123344 488899999998 9999999999999874
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=245.61 Aligned_cols=275 Identities=18% Similarity=0.195 Sum_probs=224.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.+++|+||||.||||+||++.|+.+||+|++++..-......+..+-..++++.+.-|+..+ ++.++|-|+|+|+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~evD~IyhLAa 100 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKEVDQIYHLAA 100 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHHhhhhhhhcc
Confidence 35799999999999999999999999999999876544333444333345677777776554 6778999999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC------------------chHHHhHHHHH
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP------------------SRVFSTKAAAE 143 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~------------------~~y~~~K~~~E 143 (327)
+.++ .+|.....+|..++.+++-.|++.+ +||++.||..+|++.. .-|+..|..+|
T Consensus 101 pasp~~y~~npvktIktN~igtln~lglakrv~--aR~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE 178 (350)
T KOG1429|consen 101 PASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAE 178 (350)
T ss_pred CCCCcccccCccceeeecchhhHHHHHHHHHhC--ceEEEeecccccCCcccCCCccccccccCcCCchhhhhHHHHHHH
Confidence 8544 4566778889999999999999998 7999999999986531 56999999999
Q ss_pred HHHHhh----CCCeEEEecCeeecCC-----ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 144 EAVLRE----LPWATIMRPAAMIGTE-----DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 144 ~~~~~~----~~~~~i~r~~~~~G~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
.+...+ ++++.|.|+..+|||. ...+..+...+.+.+++.++|+|.+.++|.+++|+++.++++++++..
T Consensus 179 ~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~~~- 257 (350)
T KOG1429|consen 179 TLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESDYR- 257 (350)
T ss_pred HHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCCCc-
Confidence 998776 4999999999999994 356788888888899999999999999999999999999999998875
Q ss_pred CCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCC
Q 047628 215 MGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (327)
+-+|+++|+-+|+.||++++.+..+....+...+. .|+ ....+..+
T Consensus 258 --~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~--------------------~~D------------dp~kR~pD 303 (350)
T KOG1429|consen 258 --GPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVEN--------------------GPD------------DPRKRKPD 303 (350)
T ss_pred --CCcccCCccceeHHHHHHHHHHHcCCCcceeecCC--------------------CCC------------CccccCcc
Confidence 35999999999999999999999865444433320 111 11223344
Q ss_pred CcccccccCCccc-cccCccHHHHHHHhh
Q 047628 295 NALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 295 ~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
..++++.|||.|. +|+|+|+.++.|+++
T Consensus 304 it~ake~LgW~Pkv~L~egL~~t~~~fr~ 332 (350)
T KOG1429|consen 304 ITKAKEQLGWEPKVSLREGLPLTVTYFRE 332 (350)
T ss_pred HHHHHHHhCCCCCCcHHHhhHHHHHHHHH
Confidence 4589999999998 999999999999875
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-36 Score=246.27 Aligned_cols=289 Identities=18% Similarity=0.221 Sum_probs=228.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCC-CchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCE-DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi 81 (327)
.++++||||.||||++.+..+... .+..+.++.-.- .....+++....++.+++++|+.+...+...+. .+|.|+
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vi 85 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVI 85 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhh
Confidence 478999999999999999999876 355555544221 112233333345789999999999888887774 489999
Q ss_pred Eccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC--------------chHHHhHHHHH
Q 047628 82 NLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP--------------SRVFSTKAAAE 143 (327)
Q Consensus 82 ~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--------------~~y~~~K~~~E 143 (327)
|+|+..+. .++.++...|+.++..|+++++..|++++|||+||..||+++- ++|+.+|+++|
T Consensus 86 hfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE 165 (331)
T KOG0747|consen 86 HFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAE 165 (331)
T ss_pred hhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccCCCCCchHHHHHHHH
Confidence 99998654 3456778889999999999999997799999999998865431 89999999999
Q ss_pred HHHHhhC----CCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC
Q 047628 144 EAVLREL----PWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG 216 (327)
Q Consensus 144 ~~~~~~~----~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 216 (327)
..+++++ ++++++|.+.||||++ ..++.|+.....+++.++.|++.+.++++|++|+++++..++++++. |
T Consensus 166 ~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~~--g 243 (331)
T KOG0747|consen 166 MLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGEL--G 243 (331)
T ss_pred HHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCCc--c
Confidence 9998875 9999999999999986 46788888888899999999999999999999999999999999764 9
Q ss_pred ceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCc
Q 047628 217 KIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNA 296 (327)
Q Consensus 217 ~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (327)
++|||+.+...+..|+++.+.+.+.+...-...+++... .++ |. .......+++ +
T Consensus 244 eIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~----------------v~d-----Rp---~nd~Ry~~~~-e 298 (331)
T KOG0747|consen 244 EIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFF----------------VED-----RP---YNDLRYFLDD-E 298 (331)
T ss_pred ceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCccee----------------cCC-----CC---cccccccccH-H
Confidence 999999999999999999999999864442222211100 111 00 0011233444 4
Q ss_pred ccccccCCccc-cccCccHHHHHHHhhC
Q 047628 297 LTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 297 ~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
|++ .|||+|+ +|+++++.+++||.+.
T Consensus 299 Kik-~LGw~~~~p~~eGLrktie~y~~~ 325 (331)
T KOG0747|consen 299 KIK-KLGWRPTTPWEEGLRKTIEWYTKN 325 (331)
T ss_pred HHH-hcCCcccCcHHHHHHHHHHHHHhh
Confidence 886 9999998 9999999999999875
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-36 Score=265.43 Aligned_cols=285 Identities=15% Similarity=0.059 Sum_probs=211.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhccc-----CCCCCeeEEeeCCCChhHHHHHhcc--
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLM-----GDLGQIVPMKFNPRDDNTIKATMAK-- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~-----~~~~~v~~~~~Dl~~~~~~~~~~~~-- 76 (327)
.++|+|||||||||||++++++|+++|++|++++|.++.. ...++.. ....+++++.+|++|.+.+.+++++
T Consensus 4 ~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 83 (340)
T PLN02653 4 PPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIK 83 (340)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcC
Confidence 4568999999999999999999999999999999876431 1111111 0013588999999999999998875
Q ss_pred ccEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcc-----eEEEEeccCCCCCC------------CchH
Q 047628 77 ANVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIM-----RFIQISCLGASSSS------------PSRV 135 (327)
Q Consensus 77 ~d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~-----~~v~~Ss~~v~~~~------------~~~y 135 (327)
+|+|||||+.... ..+....++|+.++.+++++|+..+ ++ +||++||..+++.. .+.|
T Consensus 84 ~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y 162 (340)
T PLN02653 84 PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPY 162 (340)
T ss_pred CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChh
Confidence 6999999997532 2344566889999999999999987 65 89999997665431 1689
Q ss_pred HHhHHHHHHHHHhh----CCCeEEEecCeeecCCC--hhH----HHHHHHHhhcCcee-eecCCCceecceeHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE----LPWATIMRPAAMIGTED--RLL----NKWAQFVKKFNFFP-LFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 136 ~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~--~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~ 204 (327)
+.+|.++|.+++.+ +++++..|+...|||+. .++ ..+...+..+...+ +.|++++.++|+|++|+|+++
T Consensus 163 ~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~ 242 (340)
T PLN02653 163 AVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAM 242 (340)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHH
Confidence 99999999998664 46778888888898843 222 23333444454444 448899999999999999999
Q ss_pred HHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCcc-ccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHH
Q 047628 205 TAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY-VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEI 283 (327)
Q Consensus 205 ~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (327)
+.+++.+. ++.||+++++.+|+.|+++.+.+.+|.+... ..+.. .+ ......
T Consensus 243 ~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------~~----~~~~~~ 295 (340)
T PLN02653 243 WLMLQQEK---PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDP--------------------RY----FRPAEV 295 (340)
T ss_pred HHHHhcCC---CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCc--------------------cc----CCcccc
Confidence 99998653 4689999999999999999999999864210 11100 00 000000
Q ss_pred HhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 284 NAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
.....+. +++++.|||+|+ +++|+++++++||++
T Consensus 296 ----~~~~~d~-~k~~~~lgw~p~~~l~~gi~~~~~~~~~ 330 (340)
T PLN02653 296 ----DNLKGDA-SKAREVLGWKPKVGFEQLVKMMVDEDLE 330 (340)
T ss_pred ----ccccCCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 1122344 588899999998 999999999999875
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=260.74 Aligned_cols=279 Identities=17% Similarity=0.176 Sum_probs=205.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh--hh-cccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR--HL-KLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~-~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
.++|||||||||||++++++|+++|++|+++.|+.+.... .+ ...+..++++++.+|+++++.+.++++++|+|||+
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih~ 84 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFHT 84 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEEe
Confidence 5799999999999999999999999999999998765321 11 11111246889999999999999999999999999
Q ss_pred cccccc--cCc-chhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccCCC--CC----------------------CCchH
Q 047628 84 IGREYE--TRN-YSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGAS--SS----------------------SPSRV 135 (327)
Q Consensus 84 a~~~~~--~~~-~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~v~--~~----------------------~~~~y 135 (327)
|+.... .++ ...+++|+.++.+++++|++. + +++||++||.+++ .. ..+.|
T Consensus 85 A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 163 (322)
T PLN02986 85 ASPVFFTVKDPQTELIDPALKGTINVLNTCKETPS-VKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWY 163 (322)
T ss_pred CCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCC-ccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccch
Confidence 987432 122 246788999999999999985 6 8999999997542 11 01569
Q ss_pred HHhHHHHHHHHHhh----CCCeEEEecCeeecCCCh----hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE----LPWATIMRPAAMIGTEDR----LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 136 ~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+.+|..+|.+++.+ +++++++||+.+|||... +...+...+..+... .+ .+.++++|++|+|++++.+
T Consensus 164 ~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~v~v~Dva~a~~~a 239 (322)
T PLN02986 164 PLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--FN--NRFYRFVDVRDVALAHIKA 239 (322)
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--CC--CcCcceeEHHHHHHHHHHH
Confidence 99999999888653 699999999999999532 222333333333332 22 4567999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
++++.. ++.||+++ +.+|+.|+++.+.+.++. .. ++.. .+. .+ .. .
T Consensus 240 l~~~~~--~~~yni~~-~~~s~~e~~~~i~~~~~~-~~---~~~~-------------------~~~-----~~-~~--~ 285 (322)
T PLN02986 240 LETPSA--NGRYIIDG-PIMSVNDIIDILRELFPD-LC---IADT-------------------NEE-----SE-MN--E 285 (322)
T ss_pred hcCccc--CCcEEEec-CCCCHHHHHHHHHHHCCC-CC---CCCC-------------------Ccc-----cc-cc--c
Confidence 998765 45899965 689999999999999862 11 1100 000 00 00 0
Q ss_pred cCcccCCCcccccccCCccccccCccHHHHHHHhhCCCC
Q 047628 288 SDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 288 ~~~~~~~~~~~~~~lg~~p~~~~~~l~~~~~~~~~~g~~ 326 (327)
.....+. ++. +.|||+|++|+|+++++++|+++.|..
T Consensus 286 ~~~~~d~-~~~-~~lg~~~~~l~e~~~~~~~~~~~~~~~ 322 (322)
T PLN02986 286 MICKVCV-EKV-KNLGVEFTPMKSSLRDTILSLKEKCLL 322 (322)
T ss_pred cCCccCH-HHH-HHcCCcccCHHHHHHHHHHHHHHcCCC
Confidence 0112444 355 569999999999999999999998863
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=263.34 Aligned_cols=281 Identities=16% Similarity=0.120 Sum_probs=200.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc---cCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---MGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++|||||||||||++++++|+++|++|++++|+.+........ .+..++++++.+|+++++.+.++++++|+|||+
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~ViH~ 84 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVFHV 84 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEEEe
Confidence 57999999999999999999999999999999986543221110 111125788999999999999999999999999
Q ss_pred ccccccc--Cc-chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC-----------CC------------C-chHH
Q 047628 84 IGREYET--RN-YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS-----------SS------------P-SRVF 136 (327)
Q Consensus 84 a~~~~~~--~~-~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~-----------~~------------~-~~y~ 136 (327)
|+..... .+ ...+++|+.++.+++++|++.+.+++|||+||.+++. .. + ++|+
T Consensus 85 A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~ 164 (351)
T PLN02650 85 ATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYF 164 (351)
T ss_pred CCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHH
Confidence 9864321 23 3578899999999999999875368999999975421 10 1 3799
Q ss_pred HhHHHHHHHHHhh----CCCeEEEecCeeecCCChh--HHHHHHHH--hhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 137 STKAAAEEAVLRE----LPWATIMRPAAMIGTEDRL--LNKWAQFV--KKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 137 ~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+|..+|.+++.+ +++++++||+.+|||+... ...+...+ ..+.. ...+. ...++|+|++|+|++++.++
T Consensus 165 ~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~r~~v~V~Dva~a~~~~l 242 (351)
T PLN02650 165 VSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNE-AHYSI-IKQGQFVHLDDLCNAHIFLF 242 (351)
T ss_pred HHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCc-cccCc-CCCcceeeHHHHHHHHHHHh
Confidence 9999999988654 6999999999999996421 11122111 11221 11222 23479999999999999999
Q ss_pred hcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhc
Q 047628 209 KDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288 (327)
Q Consensus 209 ~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
+++.. ++.|+ ++++.+|+.|+++.+.+.++.. . ++... .. .+. + ..
T Consensus 243 ~~~~~--~~~~i-~~~~~~s~~el~~~i~~~~~~~-~---~~~~~--------------~~--~~~------~-----~~ 288 (351)
T PLN02650 243 EHPAA--EGRYI-CSSHDATIHDLAKMLREKYPEY-N---IPARF--------------PG--IDE------D-----LK 288 (351)
T ss_pred cCcCc--CceEE-ecCCCcCHHHHHHHHHHhCccc-C---CCCCC--------------CC--cCc------c-----cc
Confidence 87654 34785 4557899999999999987521 1 11000 00 000 0 01
Q ss_pred CcccCCCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 289 DTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 289 ~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
....+. ++. +.|||+|+ +++++++++++|+++.++
T Consensus 289 ~~~~d~-~k~-~~lG~~p~~~l~egl~~~i~~~~~~~~ 324 (351)
T PLN02650 289 SVEFSS-KKL-TDLGFTFKYSLEDMFDGAIETCREKGL 324 (351)
T ss_pred cccCCh-HHH-HHhCCCCCCCHHHHHHHHHHHHHHcCC
Confidence 122343 354 67999999 999999999999998875
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=261.29 Aligned_cols=280 Identities=15% Similarity=0.142 Sum_probs=203.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh--h-cccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH--L-KLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~-~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+|++|||||+||||++++++|+++|++|++++|+....... + ...+..++++++.+|+++++.+.++++++|+|||+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih~ 84 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFHT 84 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEEe
Confidence 57999999999999999999999999999999887643221 1 11111136889999999999999999999999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC--------------CCC----------chH
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS--------------SSP----------SRV 135 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~--------------~~~----------~~y 135 (327)
|+.... ......+++|+.++.+++++|.+...+++||++||..++. +.+ ++|
T Consensus 85 A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y 164 (325)
T PLN02989 85 ASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWY 164 (325)
T ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccch
Confidence 986432 1224567889999999999998852268999999975421 111 369
Q ss_pred HHhHHHHHHHHHh----hCCCeEEEecCeeecCCCh----hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLR----ELPWATIMRPAAMIGTEDR----LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 136 ~~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+.+|..+|.+++. .+++++++||+.+|||+.. +...++..+..++.. + + .+.++|+|++|+|++++.+
T Consensus 165 ~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~-~-~--~~~r~~i~v~Dva~a~~~~ 240 (325)
T PLN02989 165 VLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-F-N--TTHHRFVDVRDVALAHVKA 240 (325)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCC-C-C--CcCcCeeEHHHHHHHHHHH
Confidence 9999999999865 3699999999999999643 333334334333322 2 2 2457899999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
++.+.. +++||+++ +.+|++|+++.+.+.++.. .+...+ +. . + ....
T Consensus 241 l~~~~~--~~~~ni~~-~~~s~~ei~~~i~~~~~~~-~~~~~~----------------------~~---~-~---~~~~ 287 (325)
T PLN02989 241 LETPSA--NGRYIIDG-PVVTIKDIENVLREFFPDL-CIADRN----------------------ED---I-T---ELNS 287 (325)
T ss_pred hcCccc--CceEEEec-CCCCHHHHHHHHHHHCCCC-CCCCCC----------------------CC---c-c---cccc
Confidence 987764 45899965 6899999999999998631 110000 00 0 0 0000
Q ss_pred cCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 288 SDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 288 ~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
.....+. ++++ .|||.|. +++|+++++++|+++.|.
T Consensus 288 ~~~~~~~-~k~~-~lg~~p~~~l~~gi~~~~~~~~~~~~ 324 (325)
T PLN02989 288 VTFNVCL-DKVK-SLGIIEFTPTETSLRDTVLSLKEKCL 324 (325)
T ss_pred cCcCCCH-HHHH-HcCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 1123333 4665 4999887 999999999999998763
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=259.51 Aligned_cols=278 Identities=23% Similarity=0.274 Sum_probs=218.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccc-cEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA-NVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~-d~vi~~a~~ 86 (327)
|+|||||||||||++|+++|+++|++|++++|......... .++.++.+|+++.+.+.+++.++ |+|||+|+.
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~vih~aa~ 74 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDAVIHLAAQ 74 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHhcCCCEEEEcccc
Confidence 35999999999999999999999999999999876643322 25788999999998888888888 999999998
Q ss_pred ccccC-----cchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-----------C----chHHHhHHHHHHHH
Q 047628 87 EYETR-----NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-----------P----SRVFSTKAAAEEAV 146 (327)
Q Consensus 87 ~~~~~-----~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-----------~----~~y~~~K~~~E~~~ 146 (327)
..... +..++++|+.++.+++++|++.+ +++|||+||.+++... + ++|+.+|..+|+++
T Consensus 75 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~ 153 (314)
T COG0451 75 SSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLL 153 (314)
T ss_pred CchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 65322 23488999999999999999987 9999998885543211 1 35999999999999
Q ss_pred HhhC----CCeEEEecCeeecCCCh------hHHHHHHHHhhcCc-eeeecCCCceecceeHHHHHHHHHHHhhcCCCCC
Q 047628 147 LREL----PWATIMRPAAMIGTEDR------LLNKWAQFVKKFNF-FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM 215 (327)
Q Consensus 147 ~~~~----~~~~i~r~~~~~G~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 215 (327)
+... ++++++||+.+||+++. ....+...+..+.. ....+++...++++|++|++++++.+++++..
T Consensus 154 ~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-- 231 (314)
T COG0451 154 RAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDG-- 231 (314)
T ss_pred HHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCC--
Confidence 8765 99999999999999753 23333333444443 56666778889999999999999999999886
Q ss_pred CceEEecCCc-cccHHHHHHHHHHHhhcCCc-cccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccC
Q 047628 216 GKIYELGGPD-IFTVHELAELMYDTIREYPH-YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293 (327)
Q Consensus 216 ~~~~~v~~~~-~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (327)
+ .||+++++ .+++.|+++.+.+.+|.+.. +...+. . ..........++
T Consensus 232 ~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--------------~---------------~~~~~~~~~~~~ 281 (314)
T COG0451 232 G-VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL--------------G---------------RRGDLREGKLLD 281 (314)
T ss_pred c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC--------------C---------------CCCcccccccCC
Confidence 4 99999987 89999999999999997755 222221 0 000112233444
Q ss_pred CCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 294 DNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 294 ~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
. .+++..|||.|+ ++++++.+++.|+.....
T Consensus 282 ~-~~~~~~lg~~p~~~~~~~i~~~~~~~~~~~~ 313 (314)
T COG0451 282 I-SKARAALGWEPKVSLEEGLADTLEWLLKKLE 313 (314)
T ss_pred H-HHHHHHhCCCCCCCHHHHHHHHHHHHHHhhc
Confidence 4 488889999997 899999999999887643
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=260.19 Aligned_cols=274 Identities=18% Similarity=0.185 Sum_probs=205.2
Q ss_pred EEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc----cccEEEEcc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----KANVVINLI 84 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~vi~~a 84 (327)
|||||||||||+++++.|+++|+ +|+++.|..... .+.... ...+.+|+.+.+.+..+.+ ++|+|||||
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~~----~~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A 74 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNLA----DLVIADYIDKEDFLDRLEKGAFGKIEAIFHQG 74 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhhh----heeeeccCcchhHHHHHHhhccCCCCEEEECc
Confidence 69999999999999999999997 798887764332 111111 2346778888877776654 799999999
Q ss_pred ccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-------------CCchHHHhHHHHHHHHHhh
Q 047628 85 GREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------SPSRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 85 ~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------~~~~y~~~K~~~E~~~~~~ 149 (327)
+.... .++...+++|+.++.+++++|++.+ + +||++||.+++.+ ..+.|+.+|..+|.+++++
T Consensus 75 ~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~ 152 (314)
T TIGR02197 75 ACSDTTETDGEYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRR 152 (314)
T ss_pred cccCccccchHHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHH
Confidence 87432 3345677899999999999999988 6 8999999877642 1268999999999998752
Q ss_pred ------CCCeEEEecCeeecCCCh-------hHHHHHHHHhhcCceeee------cCCCceecceeHHHHHHHHHHHhhc
Q 047628 150 ------LPWATIMRPAAMIGTEDR-------LLNKWAQFVKKFNFFPLF------GDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 150 ------~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+++++++||+.+||+++. .+..+...+..++.+.++ +++++.++++|++|+++++..+++.
T Consensus 153 ~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~ 232 (314)
T TIGR02197 153 VLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN 232 (314)
T ss_pred hHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc
Confidence 368999999999999642 344555555555555554 4677889999999999999999987
Q ss_pred CCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCc
Q 047628 211 DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290 (327)
Q Consensus 211 ~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
. .+++||+++++++|+.|+++.+.+.+|.+..+...+. |.. . ........
T Consensus 233 -~--~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~---------------------~~~--~----~~~~~~~~ 282 (314)
T TIGR02197 233 -G--VSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPM---------------------PEA--L----RGKYQYFT 282 (314)
T ss_pred -c--cCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccC---------------------ccc--c----cccccccc
Confidence 3 3579999999999999999999999997654332220 000 0 00001112
Q ss_pred ccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 291 IVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 291 ~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
..+. +++++.+||.|+ +++|+++++++|+.+
T Consensus 283 ~~~~-~k~~~~l~~~p~~~l~~~l~~~~~~~~~ 314 (314)
T TIGR02197 283 QADI-TKLRAAGYYGPFTTLEEGVKDYVQWLLA 314 (314)
T ss_pred ccch-HHHHHhcCCCCcccHHHHHHHHHHHHhC
Confidence 3444 588889999997 999999999999863
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=261.76 Aligned_cols=284 Identities=12% Similarity=0.071 Sum_probs=200.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...|+||||||+||||++++++|+++|++|++++|+.+............++++++.+|+++++.+.++++++|+|||+|
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 44689999999999999999999999999999999765432222211112468899999999999999999999999999
Q ss_pred cccccc------Ccchh-----HhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----------------C------
Q 047628 85 GREYET------RNYSF-----EDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS----------------S------ 131 (327)
Q Consensus 85 ~~~~~~------~~~~~-----~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~----------------~------ 131 (327)
+..... .+... ++.|+.++.+++++|++.+.+++||++||..++.. .
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~ 167 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVW 167 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhh
Confidence 875321 22223 33456899999999988743789999999766521 0
Q ss_pred ----C-chHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCCh-hHHHHHHHHh---hcC--ceeeecCC---Cceec
Q 047628 132 ----P-SRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTEDR-LLNKWAQFVK---KFN--FFPLFGDG---STRIQ 193 (327)
Q Consensus 132 ----~-~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~-~~~~~~~~~~---~~~--~~~~~~~~---~~~~~ 193 (327)
+ ++|+.+|.++|++++.+ +++++++||+.+|||+.. .++.+...+. .+. .++..+.. ...++
T Consensus 168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d 247 (353)
T PLN02896 168 NTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMGSIA 247 (353)
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccCcee
Confidence 1 27999999999988664 599999999999999642 1222222111 121 12222111 12369
Q ss_pred ceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcC-CccccCChHHHHHhhhHHHHHhhhCCCCC
Q 047628 194 PVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY-PHYVKVPFPVAKAVAMPREILLKKVPFPL 272 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (327)
|+|++|+|++++.+++.+.. +..|+++ ++.+|+.|+++.+.+.++.. ..+...+
T Consensus 248 fi~v~Dva~a~~~~l~~~~~--~~~~~~~-~~~~s~~el~~~i~~~~~~~~~~~~~~~---------------------- 302 (353)
T PLN02896 248 LVHIEDICDAHIFLMEQTKA--EGRYICC-VDSYDMSELINHLSKEYPCSNIQVRLDE---------------------- 302 (353)
T ss_pred EEeHHHHHHHHHHHHhCCCc--CccEEec-CCCCCHHHHHHHHHHhCCCCCccccccc----------------------
Confidence 99999999999999987654 4578665 47899999999999988632 1111000
Q ss_pred CCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 273 PRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
+.+ . ......+ .++. +.|||+|+ +++++++++++|+++++.
T Consensus 303 ~~~----~------~~~~~~~-~~~~-~~lGw~p~~~l~~~i~~~~~~~~~~~~ 344 (353)
T PLN02896 303 EKR----G------SIPSEIS-SKKL-RDLGFEYKYGIEEIIDQTIDCCVDHGF 344 (353)
T ss_pred ccc----C------ccccccC-HHHH-HHcCCCccCCHHHHHHHHHHHHHHCCC
Confidence 000 0 0011223 3355 46999998 999999999999999874
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=258.38 Aligned_cols=256 Identities=19% Similarity=0.286 Sum_probs=206.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc----cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA----KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~ 77 (327)
..+|+||||||||+||++++++|+++|++|++++|+.+..... .......++++++.+|++|++++.++++ ++
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~ 137 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPV 137 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 3468999999999999999999999999999999987542110 0000011468999999999999999987 58
Q ss_pred cEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHh--hCCCeEE
Q 047628 78 NVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLR--ELPWATI 155 (327)
Q Consensus 78 d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~--~~~~~~i 155 (327)
|+||||++.... ...+.+++|+.++.+++++|++.+ +++||++||.+++. ....|..+|...|+.++. .++++++
T Consensus 138 D~Vi~~aa~~~~-~~~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~-p~~~~~~sK~~~E~~l~~~~~gl~~tI 214 (390)
T PLN02657 138 DVVVSCLASRTG-GVKDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK-PLLEFQRAKLKFEAELQALDSDFTYSI 214 (390)
T ss_pred cEEEECCccCCC-CCccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC-cchHHHHHHHHHHHHHHhccCCCCEEE
Confidence 999999875332 123457789999999999999998 99999999998763 335788999999999986 6799999
Q ss_pred EecCeeecCCChhHHHHHHHHhhcCceeeecCCCcee-cceeHHHHHHHHHHHhhcCCCCCCceEEecCC-ccccHHHHH
Q 047628 156 MRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRI-QPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTVHELA 233 (327)
Q Consensus 156 ~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~-~~~s~~el~ 233 (327)
+||+.+||... .+...+..++++.++|+++..+ ++||++|+|++++.++.++.. .+++||++++ +.+|++|++
T Consensus 215 lRp~~~~~~~~----~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~~-~~~~~~Iggp~~~~S~~Eia 289 (390)
T PLN02657 215 VRPTAFFKSLG----GQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDESK-INKVLPIGGPGKALTPLEQG 289 (390)
T ss_pred EccHHHhcccH----HHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCccc-cCCEEEcCCCCcccCHHHHH
Confidence 99999997532 2334455677777788887644 689999999999999987665 6789999986 689999999
Q ss_pred HHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhC
Q 047628 234 ELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKV 268 (327)
Q Consensus 234 ~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (327)
+.+.+.+|+++++..+|.+.+.....+.+.+.+.+
T Consensus 290 ~~l~~~lG~~~~~~~vp~~~~~~~~~~~~~~~~~~ 324 (390)
T PLN02657 290 EMLFRILGKEPKFFKVPIQIMDFAIGVLDFLAKIF 324 (390)
T ss_pred HHHHHHhCCCCceEEcCHHHHHHHHHHHHHhhhhC
Confidence 99999999999999999999987777666555543
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=255.25 Aligned_cols=264 Identities=19% Similarity=0.228 Sum_probs=204.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccc--cEEEEcccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA--NVVINLIGR 86 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~--d~vi~~a~~ 86 (327)
+|||||||||||+++++.|+++|++|++++|. .+|+.+++.+.++++++ |+||||++.
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~ 60 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------QLDLTDPEALERLLRAIRPDAVVNTAAY 60 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------ccCCCCHHHHHHHHHhCCCCEEEECCcc
Confidence 58999999999999999999999999999884 36888999999999875 999999987
Q ss_pred cccc----CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC---------C----CchHHHhHHHHHHHHHhh
Q 047628 87 EYET----RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS---------S----PSRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 87 ~~~~----~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~---------~----~~~y~~~K~~~E~~~~~~ 149 (327)
.... .+...+++|+.++.+++++|++.+ . +||++||..++.. . .+.|+.+|..+|++++.+
T Consensus 61 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~ 138 (287)
T TIGR01214 61 TDVDGAESDPEKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA 138 (287)
T ss_pred ccccccccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh
Confidence 5322 234577899999999999999988 5 8999999766422 1 168999999999999998
Q ss_pred CCCeEEEecCeeecCCC--hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccc
Q 047628 150 LPWATIMRPAAMIGTED--RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 150 ~~~~~i~r~~~~~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~ 227 (327)
+.+++++||+.+||+.+ +++..+...+.+++.+.+.+ +..++++|++|+|+++..+++.+.. .+++||+++++.+
T Consensus 139 ~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~~-~~~~~ni~~~~~~ 215 (287)
T TIGR01214 139 GPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLAR-ARGVYHLANSGQC 215 (287)
T ss_pred CCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhccC-CCCeEEEECCCCc
Confidence 99999999999999974 45566666666666666655 3678999999999999999988644 5789999999999
Q ss_pred cHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc
Q 047628 228 TVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307 (327)
Q Consensus 228 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~ 307 (327)
|+.|+++.+.+.+|.+....+.+. ..... . ..+. .|.. ......+++ +++++.|||+++
T Consensus 216 s~~e~~~~i~~~~~~~~~~~~~~~--~~~~~--~----~~~~--~~~~----------~~~~~~~d~-~~~~~~lg~~~~ 274 (287)
T TIGR01214 216 SWYEFAQAIFEEAGADGLLLHPQE--VKPIS--S----KEYP--RPAR----------RPAYSVLDN-TKLVKTLGTPLP 274 (287)
T ss_pred CHHHHHHHHHHHhCcccccccCce--eEeec--H----HHcC--CCCC----------CCCccccch-HHHHHHcCCCCc
Confidence 999999999999997654332220 00000 0 0000 0000 011234555 489999999888
Q ss_pred cccCccHHHHH
Q 047628 308 KLKGYPTEYLI 318 (327)
Q Consensus 308 ~~~~~l~~~~~ 318 (327)
+++++++++++
T Consensus 275 ~~~~~l~~~~~ 285 (287)
T TIGR01214 275 HWREALRAYLQ 285 (287)
T ss_pred cHHHHHHHHHh
Confidence 99999988765
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=258.74 Aligned_cols=267 Identities=17% Similarity=0.157 Sum_probs=191.1
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hH-HHHHhc-----cccEE
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NT-IKATMA-----KANVV 80 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~-~~~~~~-----~~d~v 80 (327)
|||||||||||++|+++|++.|++++++.|+.+.... . .....+|+.|. +. +.++++ ++|+|
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~-~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V 72 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-F--------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI 72 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchH-H--------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence 8999999999999999999999988887776543211 0 11223455443 33 333432 68999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------C-chHHHhHHHHHHH
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------P-SRVFSTKAAAEEA 145 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------~-~~y~~~K~~~E~~ 145 (327)
||||+.... ..+...++.|+.++.+|+++|++.+ + +|||+||..++++. | ++|+.+|..+|++
T Consensus 73 ih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 150 (308)
T PRK11150 73 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEY 150 (308)
T ss_pred EECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHH
Confidence 999985432 2334578899999999999999998 6 69999998765421 1 6899999999998
Q ss_pred HHhh----CCCeEEEecCeeecCCCh---h----HHHHHHHHhhcCceeee-cCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 146 VLRE----LPWATIMRPAAMIGTEDR---L----LNKWAQFVKKFNFFPLF-GDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 146 ~~~~----~~~~~i~r~~~~~G~~~~---~----~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
++.+ +++++++||+.+||+++. . ...+...+.++....++ |+++..++++|++|+|++++.+++...
T Consensus 151 ~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~~- 229 (308)
T PRK11150 151 VRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENGV- 229 (308)
T ss_pred HHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcCC-
Confidence 8865 589999999999999642 1 22333445555444343 566778999999999999999988643
Q ss_pred CCCceEEecCCccccHHHHHHHHHHHhhcC-CccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCccc
Q 047628 214 SMGKIYELGGPDIFTVHELAELMYDTIREY-PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV 292 (327)
Q Consensus 214 ~~~~~~~v~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (327)
+++||+++++.+|+.|+++.+.+.+|.+ ....+.| .. ... ........
T Consensus 230 --~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~-----------------------~~--~~~----~~~~~~~~ 278 (308)
T PRK11150 230 --SGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFP-----------------------DK--LKG----RYQAFTQA 278 (308)
T ss_pred --CCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCc-----------------------cc--ccc----ccceeccc
Confidence 4699999999999999999999999842 1111111 00 000 00111233
Q ss_pred CCCcccccccCCccc--cccCccHHHHHHHh
Q 047628 293 SDNALTFQDLGIVPH--KLKGYPTEYLIWYR 321 (327)
Q Consensus 293 ~~~~~~~~~lg~~p~--~~~~~l~~~~~~~~ 321 (327)
+. ++++ .+||+|+ +++++++++++|+.
T Consensus 279 d~-~k~~-~~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 279 DL-TKLR-AAGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred CH-HHHH-hcCCCCCCCCHHHHHHHHHHHhh
Confidence 44 4776 4799874 89999999999985
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=254.90 Aligned_cols=259 Identities=21% Similarity=0.186 Sum_probs=198.6
Q ss_pred EEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEcccccc
Q 047628 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIGREY 88 (327)
Q Consensus 11 lI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~~~~ 88 (327)
||||||||||++|++.|++.|++|+++.+. ..+|+++.+++.++++. +|+|||||+...
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~ 61 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------KELDLTRQADVEAFFAKEKPTYVILAAAKVG 61 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeec
Confidence 699999999999999999999988766432 14799999999998874 799999998743
Q ss_pred -----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC----------------C-c-hHHHhHHHHHHH
Q 047628 89 -----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS----------------P-S-RVFSTKAAAEEA 145 (327)
Q Consensus 89 -----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~----------------~-~-~y~~~K~~~E~~ 145 (327)
...+..+++.|+.++.+++++|++.+ +++|||+||..++... | + .|+.+|..+|++
T Consensus 62 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~ 140 (306)
T PLN02725 62 GIHANMTYPADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKM 140 (306)
T ss_pred ccchhhhCcHHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHH
Confidence 13456788999999999999999998 9999999998775421 2 2 499999999987
Q ss_pred HHh----hCCCeEEEecCeeecCCCh-------hHHHHHH----HHhhcCceee-ecCCCceecceeHHHHHHHHHHHhh
Q 047628 146 VLR----ELPWATIMRPAAMIGTEDR-------LLNKWAQ----FVKKFNFFPL-FGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 146 ~~~----~~~~~~i~r~~~~~G~~~~-------~~~~~~~----~~~~~~~~~~-~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
++. .+++++++||+.+||+++. .++.+.. ....+.++.+ ++++++.++++|++|++++++.+++
T Consensus 141 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~ 220 (306)
T PLN02725 141 CQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMR 220 (306)
T ss_pred HHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHh
Confidence 754 3699999999999999642 2333332 2233444444 6788899999999999999999998
Q ss_pred cCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcC
Q 047628 210 DDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289 (327)
Q Consensus 210 ~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (327)
.... ++.||+++++.+|+.|+++.+++.+|.+..+...+. .+.. ...
T Consensus 221 ~~~~--~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~--------------------~~~~-----------~~~ 267 (306)
T PLN02725 221 RYSG--AEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTS--------------------KPDG-----------TPR 267 (306)
T ss_pred cccc--CcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCC--------------------CCCc-----------ccc
Confidence 7543 468999999999999999999999986544322110 0000 011
Q ss_pred cccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 290 TIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 290 ~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
..++. ++.+ .+||+|+ +++++++++++|++++.
T Consensus 268 ~~~d~-~k~~-~lg~~p~~~~~~~l~~~~~~~~~~~ 301 (306)
T PLN02725 268 KLMDS-SKLR-SLGWDPKFSLKDGLQETYKWYLENY 301 (306)
T ss_pred cccCH-HHHH-HhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 23444 4664 6999998 99999999999998763
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=273.42 Aligned_cols=303 Identities=20% Similarity=0.222 Sum_probs=226.7
Q ss_pred cEEEEEcCCCccHHHHHHHHH--hCCCEEEEeeCCCCCch-hhh-cccCCCCCeeEEeeCCCCh------hHHHHHhccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLA--KMGSQVLVPFRGCEDDP-RHL-KLMGDLGQIVPMKFNPRDD------NTIKATMAKA 77 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll--~~g~~V~~~~R~~~~~~-~~~-~~~~~~~~v~~~~~Dl~~~------~~~~~~~~~~ 77 (327)
|+|||||||||||++|+++|+ +.|++|++++|+..... ..+ ..++ ..+++++.+|++++ +.+.++ +++
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~ 78 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWG-ADRVVPLVGDLTEPGLGLSEADIAEL-GDI 78 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcC-CCcEEEEecccCCccCCcCHHHHHHh-cCC
Confidence 589999999999999999999 57999999999653311 111 1111 13689999999884 455555 889
Q ss_pred cEEEEccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC---------------CchHHHhHHH
Q 047628 78 NVVINLIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS---------------PSRVFSTKAA 141 (327)
Q Consensus 78 d~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~---------------~~~y~~~K~~ 141 (327)
|+|||||+.... .......++|+.++.+++++|++.+ +++|||+||..++... .++|+.+|+.
T Consensus 79 D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~ 157 (657)
T PRK07201 79 DHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFE 157 (657)
T ss_pred CEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHH
Confidence 999999987543 2335577899999999999999998 8999999998775211 1579999999
Q ss_pred HHHHHHh-hCCCeEEEecCeeecCCCh----------hHHHHHHHHhh-cCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 142 AEEAVLR-ELPWATIMRPAAMIGTEDR----------LLNKWAQFVKK-FNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 142 ~E~~~~~-~~~~~~i~r~~~~~G~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|+++++ .+++++++||+.+||+... ++..+...... ...+++++.+....+++|++|+++++..+++
T Consensus 158 ~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~ 237 (657)
T PRK07201 158 AEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMH 237 (657)
T ss_pred HHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhc
Confidence 9999985 4699999999999997431 11112222211 1234455666678899999999999999988
Q ss_pred cCCCCCCceEEecCCccccHHHHHHHHHHHhhcCC---ccccCChHHHHHhhhHH-------HHHhhhCCCCCCCCCCCC
Q 047628 210 DDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP---HYVKVPFPVAKAVAMPR-------EILLKKVPFPLPRPGLFN 279 (327)
Q Consensus 210 ~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~---~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 279 (327)
.+.. .+++||+++++++|+.|+++.+++.+|.+. ....+|.++........ ......++ +.
T Consensus 238 ~~~~-~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 308 (657)
T PRK07201 238 KDGR-DGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAALGPVRRLRNAVATQLG--------IP 308 (657)
T ss_pred CcCC-CCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhcchhhHHHHHHHHhcC--------CC
Confidence 7655 688999999999999999999999999887 66778888777665521 11112211 34
Q ss_pred HHHHHhhhcCcccCCCccccccc---CCccccccCccHHHHHHHhhC
Q 047628 280 LDEINAYTSDTIVSDNALTFQDL---GIVPHKLKGYPTEYLIWYRKG 323 (327)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~l---g~~p~~~~~~l~~~~~~~~~~ 323 (327)
+..++.+.....++.. ++++.| |+...++++.+..+++||.++
T Consensus 309 ~~~l~~~~~~~~f~~~-~~~~~L~~~~~~~p~~~~~~~~~~~~~~~~ 354 (657)
T PRK07201 309 PEVLDFVNYPTTFDSR-ETRAALKGSGIEVPRLASYAPRLWDYWERH 354 (657)
T ss_pred HHHHHhccCCCeeccH-HHHHHhccCCcCCCChHHHHHHHHHHHHhc
Confidence 5666766666677765 888888 677778889999998888664
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-34 Score=272.12 Aligned_cols=257 Identities=19% Similarity=0.166 Sum_probs=196.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+|+|||||||||++++++|+++|++|++++|+..... . .+++++.+|+++.+.+.++++++|+|||||+..
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~---~-----~~v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~ 72 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW---P-----SSADFIAADIRDATAVESAMTGADVVAHCAWVR 72 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc---c-----cCceEEEeeCCCHHHHHHHHhCCCEEEECCCcc
Confidence 58999999999999999999999999999999753311 1 257889999999999999999999999999764
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCCCh
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDR 167 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~~~ 167 (327)
.. ..++|+.++.+++++|++.+ +++||++||.. |.++|+++.+++++++++||+.+||++..
T Consensus 73 ~~-----~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~------------K~aaE~ll~~~gl~~vILRp~~VYGP~~~ 134 (854)
T PRK05865 73 GR-----NDHINIDGTANVLKAMAETG-TGRIVFTSSGH------------QPRVEQMLADCGLEWVAVRCALIFGRNVD 134 (854)
T ss_pred cc-----hHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH------------HHHHHHHHHHcCCCEEEEEeceEeCCChH
Confidence 32 56889999999999999998 89999999964 89999999988999999999999999632
Q ss_pred hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc
Q 047628 168 LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247 (327)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~ 247 (327)
.+...+... .....|+++..++|+|++|+|+++..+++++.. .+++||+++++.+|++|+++.+.+...
T Consensus 135 ---~~i~~ll~~-~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~-~ggvyNIgsg~~~Si~EIae~l~~~~~------ 203 (854)
T PRK05865 135 ---NWVQRLFAL-PVLPAGYADRVVQVVHSDDAQRLLVRALLDTVI-DSGPVNLAAPGELTFRRIAAALGRPMV------ 203 (854)
T ss_pred ---HHHHHHhcC-ceeccCCCCceEeeeeHHHHHHHHHHHHhCCCc-CCCeEEEECCCcccHHHHHHHHhhhhc------
Confidence 222222211 122234556678999999999999999976544 467999999999999999998876431
Q ss_pred cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 248 KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
+++.+....... .............+. +++++.|||+|+ +++++++++++||+.
T Consensus 204 ~v~~~~~~~~~~--------------------~~~~~~~~~~~~~D~-sKar~~LGw~P~~sLeeGL~dti~~~r~ 258 (854)
T PRK05865 204 PIGSPVLRRVTS--------------------FAELELLHSAPLMDV-TLLRDRWGFQPAWNAEECLEDFTLAVRG 258 (854)
T ss_pred cCCchhhhhccc--------------------hhhhhcccCCccCCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHh
Confidence 111111000000 000111112223454 589899999998 999999999999986
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=248.72 Aligned_cols=282 Identities=21% Similarity=0.209 Sum_probs=208.7
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEcccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLIGR 86 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~~ 86 (327)
+||||||||+||++++++|+++|++|+++.|................+++.+.+|+.+++++.++++ ++|+|||+|+.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 5899999999999999999999999998876543322222211111247788999999999999886 58999999987
Q ss_pred ccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHHhh
Q 047628 87 EYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 87 ~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~~~ 149 (327)
... ..+...+..|+.++.+++++|.+.+ ++++|++||..++... .+.|+.+|..+|.+++..
T Consensus 81 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~ 159 (328)
T TIGR01179 81 IAVGESVQDPLKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDL 159 (328)
T ss_pred cCcchhhcCchhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHH
Confidence 432 2334667889999999999999998 8999999997664321 167999999999988753
Q ss_pred -----CCCeEEEecCeeecCCC------------hhHHHHHHHHh-hcCceeeec------CCCceecceeHHHHHHHHH
Q 047628 150 -----LPWATIMRPAAMIGTED------------RLLNKWAQFVK-KFNFFPLFG------DGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 150 -----~~~~~i~r~~~~~G~~~------------~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D~a~~~~ 205 (327)
+++++++||+.+||+.. ..+..+..... ..+.+.++| ++++.++++|++|++++++
T Consensus 160 ~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~ 239 (328)
T TIGR01179 160 SKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHL 239 (328)
T ss_pred HHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHH
Confidence 58999999999999742 12333333332 223333332 5667899999999999999
Q ss_pred HHhhcCC-CCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHH
Q 047628 206 AALKDDG-TSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284 (327)
Q Consensus 206 ~~l~~~~-~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (327)
.++.... ...+++||+++++++|+.|+++.+++.+|.+.++...+.+ +. +
T Consensus 240 ~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~--------------------~~------~--- 290 (328)
T TIGR01179 240 AALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR--------------------PG------D--- 290 (328)
T ss_pred HHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC--------------------Cc------c---
Confidence 9997531 1146899999999999999999999999987665433310 00 0
Q ss_pred hhhcCcccCCCcccccccCCccc-c-ccCccHHHHHHHhhC
Q 047628 285 AYTSDTIVSDNALTFQDLGIVPH-K-LKGYPTEYLIWYRKG 323 (327)
Q Consensus 285 ~~~~~~~~~~~~~~~~~lg~~p~-~-~~~~l~~~~~~~~~~ 323 (327)
......++ +++++.|||+|+ + ++++++++++|+++|
T Consensus 291 --~~~~~~~~-~~~~~~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 291 --PASLVADA-SKIRRELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred --ccchhcch-HHHHHHhCCCCCcchHHHHHHHHHHHHhcC
Confidence 00112344 478888999998 4 999999999999875
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=247.49 Aligned_cols=228 Identities=14% Similarity=0.113 Sum_probs=184.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
++|+||||||+||||++++++|+++| ++|++++|+............ .++++++.+|++|++.+.++++++|+|||+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~ 81 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP-APCLRFFIGDVRDKERLTRALRGVDYVVHA 81 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC-CCcEEEEEccCCCHHHHHHHHhcCCEEEEC
Confidence 46899999999999999999999986 789999987654221111111 136889999999999999999999999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHh-------hCCC
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLR-------ELPW 152 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~-------~~~~ 152 (327)
|+.... ..+...+++|+.++.+++++|++.+ +++||++||..... ..++|+.+|..+|.+++. .+++
T Consensus 82 Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~~~-p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~ 159 (324)
T TIGR03589 82 AALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKAAN-PINLYGATKLASDKLFVAANNISGSKGTR 159 (324)
T ss_pred cccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCCC-CCCHHHHHHHHHHHHHHHHHhhccccCcE
Confidence 987432 2345688999999999999999998 89999999975442 237899999999998864 3599
Q ss_pred eEEEecCeeecCCChhHHHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHH
Q 047628 153 ATIMRPAAMIGTEDRLLNKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231 (327)
Q Consensus 153 ~~i~r~~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~e 231 (327)
++++||+.+||++..+++.+...+..+. .+++ +++++.++|+|++|++++++.+++... .+++|+ ++++.+++.|
T Consensus 160 ~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i-~~~~~~r~~i~v~D~a~a~~~al~~~~--~~~~~~-~~~~~~sv~e 235 (324)
T TIGR03589 160 FSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPI-TDPRMTRFWITLEQGVNFVLKSLERML--GGEIFV-PKIPSMKITD 235 (324)
T ss_pred EEEEeecceeCCCCCcHHHHHHHHHhCCCCeee-CCCCceEeeEEHHHHHHHHHHHHhhCC--CCCEEc-cCCCcEEHHH
Confidence 9999999999998777777777666554 4665 467788999999999999999998753 367885 5556799999
Q ss_pred HHHHHHHHh
Q 047628 232 LAELMYDTI 240 (327)
Q Consensus 232 l~~~i~~~~ 240 (327)
+++.+.+..
T Consensus 236 l~~~i~~~~ 244 (324)
T TIGR03589 236 LAEAMAPEC 244 (324)
T ss_pred HHHHHHhhC
Confidence 999999864
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=247.82 Aligned_cols=262 Identities=24% Similarity=0.276 Sum_probs=194.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~ 85 (327)
||||||||+|++|++|++.|.++|++|+++.|. ..|+.|.+.+.+.++. .|+|||||+
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~~pd~Vin~aa 60 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAFKPDVVINCAA 60 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH--SEEEE---
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHhCCCeEeccce
Confidence 799999999999999999999999999999776 4578899999998875 799999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------C-chHHHhHHHHHHHHHh
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------P-SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------~-~~y~~~K~~~E~~~~~ 148 (327)
.+.. ..+...+.+|+.++.+|+++|...| . ++||+||..|+... | +.||++|..+|+.+++
T Consensus 61 ~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~-~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~ 138 (286)
T PF04321_consen 61 YTNVDACEKNPEEAYAINVDATKNLAEACKERG-A-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRA 138 (286)
T ss_dssp ---HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHH
T ss_pred eecHHhhhhChhhhHHHhhHHHHHHHHHHHHcC-C-cEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 8643 3567899999999999999999998 4 99999998764211 1 7899999999999999
Q ss_pred hCCCeEEEecCeeecC-CChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC--CCCceEEecCCc
Q 047628 149 ELPWATIMRPAAMIGT-EDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT--SMGKIYELGGPD 225 (327)
Q Consensus 149 ~~~~~~i~r~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~--~~~~~~~v~~~~ 225 (327)
...++.|+|++++||+ ..+++..+...+.+++.+.++ .+..++++++.|+|+++..++++... ...++||+++++
T Consensus 139 ~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~--~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~~~~~ 216 (286)
T PF04321_consen 139 ACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLF--DDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHLSGPE 216 (286)
T ss_dssp H-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEE--SSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE---BS
T ss_pred hcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEee--CCceeCCEEHHHHHHHHHHHHHhcccccccceeEEEecCc
Confidence 8889999999999999 456778888888888888875 46789999999999999999987531 135799999999
Q ss_pred cccHHHHHHHHHHHhhcCC-ccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCC
Q 047628 226 IFTVHELAELMYDTIREYP-HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304 (327)
Q Consensus 226 ~~s~~el~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 304 (327)
.+|..|+++.+++.+|.+. .+.+++.... +...+. .....++. +|.++.||.
T Consensus 217 ~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~--------------~~~~~r------------p~~~~L~~-~kl~~~~g~ 269 (286)
T PF04321_consen 217 RVSRYEFAEAIAKILGLDPELIKPVSSSEF--------------PRAAPR------------PRNTSLDC-RKLKNLLGI 269 (286)
T ss_dssp -EEHHHHHHHHHHHHTHCTTEEEEESSTTS--------------TTSSGS-------------SBE-B---HHHHHCTTS
T ss_pred ccCHHHHHHHHHHHhCCCCceEEecccccC--------------CCCCCC------------CCcccccH-HHHHHccCC
Confidence 9999999999999999876 4445541000 000000 12345565 488899999
Q ss_pred ccccccCccHHHHHHH
Q 047628 305 VPHKLKGYPTEYLIWY 320 (327)
Q Consensus 305 ~p~~~~~~l~~~~~~~ 320 (327)
++++|+++++++++.|
T Consensus 270 ~~~~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 270 KPPPWREGLEELVKQY 285 (286)
T ss_dssp ---BHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHh
Confidence 9999999999998876
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=244.58 Aligned_cols=271 Identities=17% Similarity=0.146 Sum_probs=198.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh------cc-ccEEE
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM------AK-ANVVI 81 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~------~~-~d~vi 81 (327)
+|+||||||++|++++++|+++|++|++++|++++... .+++.+.+|+.|++++.+++ ++ +|.|+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~--------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG--------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC--------CCCccccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 48999999999999999999999999999999875321 25777889999999999999 57 99999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhh-CCCeEEEecCe
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAA 160 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~-~~~~~i~r~~~ 160 (327)
|+++.... ......+++++|+++| ++|||++|+.++....+ .+...|+++++. +++++++||++
T Consensus 73 ~~~~~~~~---------~~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~~-----~~~~~~~~l~~~~gi~~tilRp~~ 137 (285)
T TIGR03649 73 LVAPPIPD---------LAPPMIKFIDFARSKG-VRRFVLLSASIIEKGGP-----AMGQVHAHLDSLGGVEYTVLRPTW 137 (285)
T ss_pred EeCCCCCC---------hhHHHHHHHHHHHHcC-CCEEEEeeccccCCCCc-----hHHHHHHHHHhccCCCEEEEeccH
Confidence 99864321 1245678999999999 99999999977654322 345678888886 89999999999
Q ss_pred eecCCChhHHH-HHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHH
Q 047628 161 MIGTEDRLLNK-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239 (327)
Q Consensus 161 ~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~ 239 (327)
+++.. ... ....+.+.+.+. .+.++.++++++++|+|++++.++.++.. .++.|++.+++.+|+.|+++.+.+.
T Consensus 138 f~~~~---~~~~~~~~~~~~~~~~-~~~g~~~~~~v~~~Dva~~~~~~l~~~~~-~~~~~~l~g~~~~s~~eia~~l~~~ 212 (285)
T TIGR03649 138 FMENF---SEEFHVEAIRKENKIY-SATGDGKIPFVSADDIARVAYRALTDKVA-PNTDYVVLGPELLTYDDVAEILSRV 212 (285)
T ss_pred Hhhhh---cccccccccccCCeEE-ecCCCCccCcccHHHHHHHHHHHhcCCCc-CCCeEEeeCCccCCHHHHHHHHHHH
Confidence 88432 111 112233333333 35678889999999999999999998765 6789999999999999999999999
Q ss_pred hhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHH---hhhcCcccCCCcccccccCCccccccCccHHH
Q 047628 240 IREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN---AYTSDTIVSDNALTFQDLGIVPHKLKGYPTEY 316 (327)
Q Consensus 240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lg~~p~~~~~~l~~~ 316 (327)
+|+++.+..++.+....... . .+ .|.. ....+.. .......-..+....+.+|.+|++|++++++.
T Consensus 213 ~g~~v~~~~~~~~~~~~~l~------~-~g--~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~~~~~~~~~~ 281 (285)
T TIGR03649 213 LGRKITHVKLTEEELAQRLQ------S-FG--MPED--LARMLASLDTAVKNGAEVRLNDVVKAVTGSKPRGFRDFAESN 281 (285)
T ss_pred hCCceEEEeCCHHHHHHHHH------H-cC--CCHH--HHHHHHHHHHHHhCCccccccchHHHHhCcCCccHHHHHHHh
Confidence 99999999888765533211 0 01 1110 1111111 11121111122345677999999999999877
Q ss_pred HH
Q 047628 317 LI 318 (327)
Q Consensus 317 ~~ 318 (327)
..
T Consensus 282 ~~ 283 (285)
T TIGR03649 282 KA 283 (285)
T ss_pred hh
Confidence 44
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-33 Score=232.10 Aligned_cols=285 Identities=19% Similarity=0.160 Sum_probs=223.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc----ccCCCCCeeEEeeCCCChhHHHHHhcc--ccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK----LMGDLGQIVPMKFNPRDDNTIKATMAK--ANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~----~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~v 80 (327)
.++||||||.||||+|.+-+|+++||.|.+++.-.......++ .......+.++++|++|.+.|+++|+. +|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 4689999999999999999999999999999876544332222 112225799999999999999999975 6999
Q ss_pred EEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------C-chHHHhHHHH
Q 047628 81 INLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------P-SRVFSTKAAA 142 (327)
Q Consensus 81 i~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~-~~y~~~K~~~ 142 (327)
+|+|+.... ..|..++++|+.++.+|++++++++ ++.+|++||+.+|... | ++|+.+|..+
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~i 160 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAI 160 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHH
Confidence 999988543 4567799999999999999999999 9999999999886432 2 7899999999
Q ss_pred HHHHHhhC----CCeEEEecCeeec--CCC-----------hhHHHHHHHH--------hhcCceeeecCCCceecceeH
Q 047628 143 EEAVLREL----PWATIMRPAAMIG--TED-----------RLLNKWAQFV--------KKFNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 143 E~~~~~~~----~~~~i~r~~~~~G--~~~-----------~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~ 197 (327)
|+.+.... ..++.+|.+..+| |.. +..+.....+ .-+..++.. +++..++++|+
T Consensus 161 E~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~-dgt~vrdyi~v 239 (343)
T KOG1371|consen 161 EEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTI-DGTIVRDYIHV 239 (343)
T ss_pred HHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCccccc-CCCeeecceee
Confidence 99998764 7889999999988 311 1121111111 112234442 56889999999
Q ss_pred HHHHHHHHHHhhcCCC-CCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCC
Q 047628 198 VDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPG 276 (327)
Q Consensus 198 ~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (327)
-|+|.....++.+... ..-.+||++.+...+..||+..+++..|.++++..++. . .+
T Consensus 240 ~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~---------------R----~g--- 297 (343)
T KOG1371|consen 240 LDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPR---------------R----NG--- 297 (343)
T ss_pred EehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCC---------------C----CC---
Confidence 9999999999987553 13359999999999999999999999999988776651 0 01
Q ss_pred CCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 277 LFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
.....+.+.+++.++|||+|+ .+++++++..+|..++-+
T Consensus 298 ----------dv~~~ya~~~~a~~elgwk~~~~iee~c~dlw~W~~~np~ 337 (343)
T KOG1371|consen 298 ----------DVAFVYANPSKAQRELGWKAKYGLQEMLKDLWRWQKQNPS 337 (343)
T ss_pred ----------CceeeeeChHHHHHHhCCccccCHHHHHHHHHHHHhcCCC
Confidence 223455566789999999998 999999999999998654
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=226.91 Aligned_cols=259 Identities=19% Similarity=0.211 Sum_probs=209.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~ 85 (327)
|+|||||++|++|+.|.+.|. .+++|++++|.. .|++|++.+.++++. .|+|||+|+
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~~PDvVIn~AA 59 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE--------------------LDITDPDAVLEVIRETRPDVVINAAA 59 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc--------------------ccccChHHHHHHHHhhCCCEEEECcc
Confidence 459999999999999999988 679999998762 689999999999975 699999999
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC------------CCCC-chHHHhHHHHHHHHHh
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS------------SSSP-SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~------------~~~~-~~y~~~K~~~E~~~~~ 148 (327)
.+.. ..++..+.+|..++.+++++|++.| .++||+||-.|. ...| +.||++|+..|+.+++
T Consensus 60 yt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~ 137 (281)
T COG1091 60 YTAVDKAESEPELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRA 137 (281)
T ss_pred ccccccccCCHHHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHH
Confidence 9754 3456788999999999999999999 489999997652 1122 8899999999999999
Q ss_pred hCCCeEEEecCeeecCC-ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccc
Q 047628 149 ELPWATIMRPAAMIGTE-DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 149 ~~~~~~i~r~~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~ 227 (327)
.+...+|+|.+++||.. .+|...+.+...+++.+.++ .++..+++++.|+|+++..++..... +.+||+++....
T Consensus 138 ~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv--~Dq~gsPt~~~dlA~~i~~ll~~~~~--~~~yH~~~~g~~ 213 (281)
T COG1091 138 AGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVV--DDQYGSPTYTEDLADAILELLEKEKE--GGVYHLVNSGEC 213 (281)
T ss_pred hCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEE--CCeeeCCccHHHHHHHHHHHHhcccc--CcEEEEeCCCcc
Confidence 99999999999999984 57777888888888888875 56899999999999999999998875 459999998889
Q ss_pred cHHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCcc
Q 047628 228 TVHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306 (327)
Q Consensus 228 s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p 306 (327)
|+.|+++.|.+.++.+.... +.+.. -++ .|.+ + -....++. .|..+.+|++|
T Consensus 214 Swydfa~~I~~~~~~~~~v~~~~~~~--------------~~~--~~a~----R------P~~S~L~~-~k~~~~~g~~~ 266 (281)
T COG1091 214 SWYEFAKAIFEEAGVDGEVIEPIASA--------------EYP--TPAK----R------PANSSLDT-KKLEKAFGLSL 266 (281)
T ss_pred cHHHHHHHHHHHhCCCcccccccccc--------------ccC--ccCC----C------Ccccccch-HHHHHHhCCCC
Confidence 99999999999998665433 22210 000 1110 0 01123454 37888999999
Q ss_pred ccccCccHHHHHHH
Q 047628 307 HKLKGYPTEYLIWY 320 (327)
Q Consensus 307 ~~~~~~l~~~~~~~ 320 (327)
++|+++++.+++.+
T Consensus 267 ~~w~~~l~~~~~~~ 280 (281)
T COG1091 267 PEWREALKALLDEL 280 (281)
T ss_pred ccHHHHHHHHHhhc
Confidence 99999998887653
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-32 Score=229.13 Aligned_cols=207 Identities=28% Similarity=0.322 Sum_probs=179.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccc--cEEEEccccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA--NVVINLIGRE 87 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~--d~vi~~a~~~ 87 (327)
|||||||||||++++++|+++|++|+.+.|++......... .+++++.+|+.+.+.+.+++++. |+|||+|+..
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~ 76 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFS 76 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESEEEEEBSSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc----ceEEEEEeeccccccccccccccCceEEEEeeccc
Confidence 79999999999999999999999999999988764322211 15899999999999999999876 9999999874
Q ss_pred c----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC---------C----chHHHhHHHHHHHHHhh-
Q 047628 88 Y----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS---------P----SRVFSTKAAAEEAVLRE- 149 (327)
Q Consensus 88 ~----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~---------~----~~y~~~K~~~E~~~~~~- 149 (327)
. ...+....+.|+.++.+++++|++.+ +++||++||..+++.. + ++|+.+|...|++++.+
T Consensus 77 ~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~ 155 (236)
T PF01370_consen 77 SNPESFEDPEEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYA 155 (236)
T ss_dssp SHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 2 13446788899999999999999999 8999999998775433 1 68999999999999765
Q ss_pred ---CCCeEEEecCeeecCC------ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEE
Q 047628 150 ---LPWATIMRPAAMIGTE------DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYE 220 (327)
Q Consensus 150 ---~~~~~i~r~~~~~G~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~ 220 (327)
+++++++||+.+||+. ..++..+...+..++++.+++++++.++++|++|+|++++.+++++.. .+++||
T Consensus 156 ~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~-~~~~yN 234 (236)
T PF01370_consen 156 KKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKA-AGGIYN 234 (236)
T ss_dssp HHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCT-TTEEEE
T ss_pred cccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCC-CCCEEE
Confidence 5999999999999998 357788888888888899999999999999999999999999999985 689999
Q ss_pred ec
Q 047628 221 LG 222 (327)
Q Consensus 221 v~ 222 (327)
|+
T Consensus 235 ig 236 (236)
T PF01370_consen 235 IG 236 (236)
T ss_dssp ES
T ss_pred eC
Confidence 86
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-32 Score=243.34 Aligned_cols=236 Identities=17% Similarity=0.095 Sum_probs=178.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc---CC----CCCeeEEeeCCCChhHHHHHhcc
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM---GD----LGQIVPMKFNPRDDNTIKATMAK 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~----~~~v~~~~~Dl~~~~~~~~~~~~ 76 (327)
.+++++||||||+||||+++++.|+++|++|+++.|+.+... .+... +. ..++.++.+|++|++.+.+++++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~ 128 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG 128 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh
Confidence 355789999999999999999999999999999988754421 11111 00 12478899999999999999999
Q ss_pred ccEEEEccccccccC----cchhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccC--CCCC----C--------------
Q 047628 77 ANVVINLIGREYETR----NYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLG--ASSS----S-------------- 131 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~----~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~--v~~~----~-------------- 131 (327)
+|.|||+++...... .....++|+.++.+++++|++. + +++|||+||.. ++.. .
T Consensus 129 ~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~ 207 (367)
T PLN02686 129 CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDES 207 (367)
T ss_pred ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCCCCChh
Confidence 999999998753321 2356678999999999999986 6 99999999952 2210 0
Q ss_pred ----C-chHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 132 ----P-SRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 132 ----~-~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
| ++|+.+|..+|++++.+ +++++++||+.+|||+.. ....+.. ...+ ..+++|++ .++++|++|+
T Consensus 208 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~-~~~g-~~~~~g~g--~~~~v~V~Dv 283 (367)
T PLN02686 208 FCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIA-YLKG-AQEMLADG--LLATADVERL 283 (367)
T ss_pred hcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHH-HhcC-CCccCCCC--CcCeEEHHHH
Confidence 1 46999999999998653 699999999999999642 1111222 2223 34555554 3579999999
Q ss_pred HHHHHHHhhcC--CCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc
Q 047628 201 AAAVTAALKDD--GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247 (327)
Q Consensus 201 a~~~~~~l~~~--~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~ 247 (327)
|++++.+++.. .. .+++| +++++.+|+.|+++.+.+.+|.+....
T Consensus 284 a~A~~~al~~~~~~~-~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~ 330 (367)
T PLN02686 284 AEAHVCVYEAMGNKT-AFGRY-ICFDHVVSREDEAEELARQIGLPINKI 330 (367)
T ss_pred HHHHHHHHhccCCCC-CCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcC
Confidence 99999999853 22 45688 777799999999999999999765543
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-31 Score=229.87 Aligned_cols=266 Identities=18% Similarity=0.141 Sum_probs=187.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYE 89 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~ 89 (327)
|||||||||||+++++.|+++|++|++++|+++....... .. ..|+.. ..+.+.+.++|+|||||+....
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~--~~~~~~-~~~~~~~~~~D~Vvh~a~~~~~ 70 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW-------EG--YKPWAP-LAESEALEGADAVINLAGEPIA 70 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc-------ee--eecccc-cchhhhcCCCCEEEECCCCCcc
Confidence 6899999999999999999999999999998766422110 11 112222 4456677899999999987432
Q ss_pred c------CcchhHhhhhHHHHHHHHHHHHcCCcc--eEEEEeccCCCC---------CC-C---chHHHhHHHHHHHHHh
Q 047628 90 T------RNYSFEDVNHFMAERIAGIAKEHGGIM--RFIQISCLGASS---------SS-P---SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 90 ~------~~~~~~~~n~~~~~~l~~a~~~~~~v~--~~v~~Ss~~v~~---------~~-~---~~y~~~K~~~E~~~~~ 148 (327)
. .+..++++|+.++.+++++|++.+ ++ +||++|+.++++ +. + +.|+..+...|+.+..
T Consensus 71 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~ 149 (292)
T TIGR01777 71 DKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQA 149 (292)
T ss_pred cccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhh
Confidence 1 123567889999999999999998 63 566677754432 11 1 2345556566665443
Q ss_pred ---hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCc
Q 047628 149 ---ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225 (327)
Q Consensus 149 ---~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~ 225 (327)
.+++++++||+.+||++++....+......... ..++++++.++++|++|+|+++..+++++.. +++||+++++
T Consensus 150 ~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~--~g~~~~~~~~ 226 (292)
T TIGR01777 150 AEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLG-GPLGSGRQWFSWIHIEDLVQLILFALENASI--SGPVNATAPE 226 (292)
T ss_pred chhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcc-cccCCCCcccccEeHHHHHHHHHHHhcCccc--CCceEecCCC
Confidence 359999999999999976555544433322111 1247788999999999999999999987654 4699999999
Q ss_pred cccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCc
Q 047628 226 IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIV 305 (327)
Q Consensus 226 ~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~ 305 (327)
.+|+.|+++.+++.+|.+.. ..+|.+..+....... ..+..+...+.+ +.+ .+||+
T Consensus 227 ~~s~~di~~~i~~~~g~~~~-~~~p~~~~~~~~~~~~---------------------~~~~~~~~~~~~-~~~-~~g~~ 282 (292)
T TIGR01777 227 PVRNKEFAKALARALHRPAF-FPVPAFVLRALLGEMA---------------------DLLLKGQRVLPE-KLL-EAGFQ 282 (292)
T ss_pred ccCHHHHHHHHHHHhCCCCc-CcCCHHHHHHHhchhh---------------------HHHhCCcccccH-HHH-hcCCe
Confidence 99999999999999997654 4588777664432100 112334455554 664 59999
Q ss_pred cc--cccCcc
Q 047628 306 PH--KLKGYP 313 (327)
Q Consensus 306 p~--~~~~~l 313 (327)
|. +++|++
T Consensus 283 ~~~~~~~~~~ 292 (292)
T TIGR01777 283 FQYPDLDEAL 292 (292)
T ss_pred eeCcChhhcC
Confidence 97 466653
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.6e-31 Score=241.74 Aligned_cols=237 Identities=17% Similarity=0.206 Sum_probs=183.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCch--hhhc-c-------------cC-C-----CCCeeE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDDP--RHLK-L-------------MG-D-----LGQIVP 59 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~--~~~~-~-------------~~-~-----~~~v~~ 59 (327)
...++|+|||||||+|++|++.|+..+ .+|+++.|...... ..+. . .+ . ..++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 346899999999999999999999764 47899999765321 1111 0 00 0 147899
Q ss_pred EeeCCC-------ChhHHHHHhccccEEEEccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-
Q 047628 60 MKFNPR-------DDNTIKATMAKANVVINLIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS- 130 (327)
Q Consensus 60 ~~~Dl~-------~~~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~- 130 (327)
+.+|++ +.+.+.++++++|+|||+|+.... .++....++|+.++.+++++|++.+++++|||+||..+++.
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~ 168 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEK 168 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCC
Confidence 999998 445567788899999999987543 34567889999999999999998633889999999766421
Q ss_pred ---------------------------------------------------------------CCchHHHhHHHHHHHHH
Q 047628 131 ---------------------------------------------------------------SPSRVFSTKAAAEEAVL 147 (327)
Q Consensus 131 ---------------------------------------------------------------~~~~y~~~K~~~E~~~~ 147 (327)
.|+.|+.+|..+|++++
T Consensus 169 ~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv~ 248 (491)
T PLN02996 169 SGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLLG 248 (491)
T ss_pred CceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHHH
Confidence 13569999999999998
Q ss_pred hh--CCCeEEEecCeeecCCChhH----------HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC---C
Q 047628 148 RE--LPWATIMRPAAMIGTEDRLL----------NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD---G 212 (327)
Q Consensus 148 ~~--~~~~~i~r~~~~~G~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~---~ 212 (327)
++ +++++++||+.++|+.+..+ ..+...+..+....++|++++.++++|++|++++++.++... .
T Consensus 249 ~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~ 328 (491)
T PLN02996 249 NFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQ 328 (491)
T ss_pred HhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccC
Confidence 76 49999999999999854321 122222344555667899999999999999999999998763 1
Q ss_pred CCCCceEEecCC--ccccHHHHHHHHHHHhhc
Q 047628 213 TSMGKIYELGGP--DIFTVHELAELMYDTIRE 242 (327)
Q Consensus 213 ~~~~~~~~v~~~--~~~s~~el~~~i~~~~g~ 242 (327)
. .+++||++++ .++|+.|+++.+.+.++.
T Consensus 329 ~-~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~ 359 (491)
T PLN02996 329 G-SEIIYHVGSSLKNPVKFSNLHDFAYRYFSK 359 (491)
T ss_pred C-CCcEEEecCCCCCcccHHHHHHHHHHHhhh
Confidence 2 3679999987 789999999999998874
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=5e-30 Score=230.81 Aligned_cols=246 Identities=15% Similarity=0.144 Sum_probs=186.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCch------hhhcccC------CCCCeeEEeeCCCCh------h
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDP------RHLKLMG------DLGQIVPMKFNPRDD------N 68 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~------~~~~~~~------~~~~v~~~~~Dl~~~------~ 68 (327)
+|+|||||||||++++++|+++| ++|++++|+.+... ..+.... ..++++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 67999999876321 1111100 003689999998753 5
Q ss_pred HHHHHhccccEEEEcccccccc-CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC----------------
Q 047628 69 TIKATMAKANVVINLIGREYET-RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS---------------- 131 (327)
Q Consensus 69 ~~~~~~~~~d~vi~~a~~~~~~-~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~---------------- 131 (327)
.+..+.+++|+|||+|+..... ......+.|+.++.+++++|.+.+ +++|+++||.+++...
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~ 159 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDLSTVTEDDAIVTPPP 159 (367)
T ss_pred HHHHHHhhCCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCCCCcccccccccccc
Confidence 6777778899999999875432 224566789999999999999988 8889999998775321
Q ss_pred --CchHHHhHHHHHHHHHhh---CCCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 132 --PSRVFSTKAAAEEAVLRE---LPWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 132 --~~~y~~~K~~~E~~~~~~---~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
.+.|+.+|+.+|.+++.. +++++++||+.++|+.. ..+..+.......+.++. ......++++++|
T Consensus 160 ~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~vdd 237 (367)
T TIGR01746 160 GLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPD--SPELTEDLTPVDY 237 (367)
T ss_pred ccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCC--CCccccCcccHHH
Confidence 146999999999998765 69999999999999621 233334333333333332 2223678999999
Q ss_pred HHHHHHHHhhcCCC-CCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhh
Q 047628 200 VAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVA 258 (327)
Q Consensus 200 ~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~ 258 (327)
++++++.++..+.. ..+++||+++++++++.|+++.+.+ .|.+++..+.+.|......
T Consensus 238 va~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~~~~~ 296 (367)
T TIGR01746 238 VARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQRLED 296 (367)
T ss_pred HHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHHHHHH
Confidence 99999999887653 1278999999999999999999999 8888887777777776544
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=212.99 Aligned_cols=228 Identities=20% Similarity=0.203 Sum_probs=180.0
Q ss_pred EEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhccc---CCCCCe----eEEeeCCCChhHHHHHhc--cccE
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLM---GDLGQI----VPMKFNPRDDNTIKATMA--KANV 79 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~---~~~~~v----~~~~~Dl~~~~~~~~~~~--~~d~ 79 (327)
||||||+|.||+.|+++|++.+ .++++++|+..+....-.++ ...+++ ..+.+|++|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999987 68999999976643322222 111234 345899999999999998 7999
Q ss_pred EEEcccccc----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhC-----
Q 047628 80 VINLIGREY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLREL----- 150 (327)
Q Consensus 80 vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~----- 150 (327)
|||.|+.-+ ...|.+...+|+.||.|++++|.+++ +++||++||-.+.. +-+.||.+|+.+|+++...+
T Consensus 81 VfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv~-PtnvmGatKrlaE~l~~~~~~~~~~ 158 (293)
T PF02719_consen 81 VFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAVN-PTNVMGATKRLAEKLVQAANQYSGN 158 (293)
T ss_dssp EEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCSS---SHHHHHHHHHHHHHHHHCCTSSS
T ss_pred EEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccCC-CCcHHHHHHHHHHHHHHHHhhhCCC
Confidence 999999854 35678899999999999999999999 99999999987763 33899999999999998875
Q ss_pred --CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcccc
Q 047628 151 --PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 151 --~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s 228 (327)
..++++|+|.|+|.....++.|.+++.+++++++ .+++-.+-|++++++++.++.+...... |++|.+..+++++
T Consensus 159 ~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTv-T~p~mtRffmti~EAv~Lvl~a~~~~~~--geifvl~mg~~v~ 235 (293)
T PF02719_consen 159 SDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTV-TDPDMTRFFMTIEEAVQLVLQAAALAKG--GEIFVLDMGEPVK 235 (293)
T ss_dssp S--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEE-CETT-EEEEE-HHHHHHHHHHHHHH--T--TEEEEE---TCEE
T ss_pred CCcEEEEEEecceecCCCcHHHHHHHHHHcCCccee-CCCCcEEEEecHHHHHHHHHHHHhhCCC--CcEEEecCCCCcC
Confidence 5789999999999999999999999999999988 4678888999999999999999998874 8999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 047628 229 VHELAELMYDTIRE 242 (327)
Q Consensus 229 ~~el~~~i~~~~g~ 242 (327)
+.||++.+.+..|.
T Consensus 236 I~dlA~~~i~~~g~ 249 (293)
T PF02719_consen 236 ILDLAEAMIELSGL 249 (293)
T ss_dssp CCCHHHHHHHHTT-
T ss_pred HHHHHHHHHhhccc
Confidence 99999999999984
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-28 Score=214.98 Aligned_cols=256 Identities=13% Similarity=0.092 Sum_probs=181.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a 84 (327)
.|+||||||+||||++|++.|+++|++|+... .|+.+.+.+...++ ++|+|||||
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------~~~~~~~~v~~~l~~~~~D~ViH~A 65 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------GRLENRASLEADIDAVKPTHVFNAA 65 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-----------------------CccCCHHHHHHHHHhcCCCEEEECC
Confidence 48999999999999999999999999987532 23334555665555 589999999
Q ss_pred ccccc-------cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC---------------CC-C---C-chHHH
Q 047628 85 GREYE-------TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS---------------SS-S---P-SRVFS 137 (327)
Q Consensus 85 ~~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~---------------~~-~---~-~~y~~ 137 (327)
+.... ..+...+++|+.++.+|+++|++.+ +++++ +||..++ |. . + +.|+.
T Consensus 66 a~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~g-v~~v~-~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~ 143 (298)
T PLN02778 66 GVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERG-LVLTN-YATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSK 143 (298)
T ss_pred cccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEE-EecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHH
Confidence 97632 2456788999999999999999998 86555 4443221 11 1 2 68999
Q ss_pred hHHHHHHHHHhhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 138 TKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 138 ~K~~~E~~~~~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
+|+.+|.+++.+. +..++|++..+|.+......++..+.....+...+ .+++|++|++++++.+++.+. ++
T Consensus 144 sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~-----~s~~yv~D~v~al~~~l~~~~---~g 214 (298)
T PLN02778 144 TKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIP-----NSMTILDELLPISIEMAKRNL---TG 214 (298)
T ss_pred HHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcC-----CCCEEHHHHHHHHHHHHhCCC---CC
Confidence 9999999998864 67889998878765333344566666555443332 379999999999999997653 35
Q ss_pred eEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcc
Q 047628 218 IYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297 (327)
Q Consensus 218 ~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (327)
+||+++++.+|+.|+++.+++.+|....+..+...... . . .. .| .....++. +|
T Consensus 215 ~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~---~----~-~~----~~-------------~~~~~Ld~-~k 268 (298)
T PLN02778 215 IYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQA---K----V-IV----AP-------------RSNNELDT-TK 268 (298)
T ss_pred eEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHH---H----H-Hh----CC-------------CccccccH-HH
Confidence 99999999999999999999999965432222210000 0 0 00 01 11123554 47
Q ss_pred cccccCCccccccCccHHHHHHHhh
Q 047628 298 TFQDLGIVPHKLKGYPTEYLIWYRK 322 (327)
Q Consensus 298 ~~~~lg~~p~~~~~~l~~~~~~~~~ 322 (327)
.++.++-.+...++++++.++.+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (298)
T PLN02778 269 LKREFPELLPIKESLIKYVFEPNKK 293 (298)
T ss_pred HHHhcccccchHHHHHHHHHHHHHh
Confidence 7788877666777888888877754
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-28 Score=200.20 Aligned_cols=270 Identities=17% Similarity=0.176 Sum_probs=192.0
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-cccEEEEcccccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-KANVVINLIGREY 88 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-~~d~vi~~a~~~~ 88 (327)
|+|||||||||++|+..|.+.||+|++++|++.+....+.. .+. ..+.+.+... ++|+|||+||.+-
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~-----~v~-------~~~~~~~~~~~~~DavINLAG~~I 68 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP-----NVT-------LWEGLADALTLGIDAVINLAGEPI 68 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc-----ccc-------ccchhhhcccCCCCEEEECCCCcc
Confidence 68999999999999999999999999999998875433221 111 2234444444 7999999999853
Q ss_pred ccC------cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCC---------C---chHHHhHHHHHHHHHh-
Q 047628 89 ETR------NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSS---------P---SRVFSTKAAAEEAVLR- 148 (327)
Q Consensus 89 ~~~------~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~---------~---~~y~~~K~~~E~~~~~- 148 (327)
... .+...+..+..|+.|+++..+.. +.+.+|-.|..+.|+++ | +..+..-.+=|+....
T Consensus 69 ~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a 148 (297)
T COG1090 69 AERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQA 148 (297)
T ss_pred ccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhh
Confidence 222 24577778899999999988554 25667777776665433 2 2223333333444433
Q ss_pred --hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcc
Q 047628 149 --ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI 226 (327)
Q Consensus 149 --~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~ 226 (327)
.+.+++++|.|.|+++..+.+..+...-+- ..-..+|+|.++++|||++|+++++..++++... .+.||+++|.+
T Consensus 149 ~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~-glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~l--sGp~N~taP~P 225 (297)
T COG1090 149 QQLGTRVVLLRTGVVLSPDGGALGKMLPLFKL-GLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQL--SGPFNLTAPNP 225 (297)
T ss_pred hhcCceEEEEEEEEEecCCCcchhhhcchhhh-ccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCC--CCcccccCCCc
Confidence 358999999999999988888776654442 2223448999999999999999999999999875 45999999999
Q ss_pred ccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCcc
Q 047628 227 FTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306 (327)
Q Consensus 227 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p 306 (327)
++.+|+...+++.+++| ...++|....+.... ..... +..+...-+. +. ...|++.
T Consensus 226 V~~~~F~~al~r~l~RP-~~~~vP~~~~rl~LG--------------------e~a~~-lL~gQrvlP~-kl-~~aGF~F 281 (297)
T COG1090 226 VRNKEFAHALGRALHRP-AILPVPSFALRLLLG--------------------EMADL-LLGGQRVLPK-KL-EAAGFQF 281 (297)
T ss_pred CcHHHHHHHHHHHhCCC-ccccCcHHHHHHHhh--------------------hhHHH-HhccchhhHH-HH-HHCCCee
Confidence 99999999999999765 447788887776554 11112 2333333332 32 4456555
Q ss_pred --ccccCccHHHHH
Q 047628 307 --HKLKGYPTEYLI 318 (327)
Q Consensus 307 --~~~~~~l~~~~~ 318 (327)
.++++++++.+.
T Consensus 282 ~y~dl~~AL~~il~ 295 (297)
T COG1090 282 QYPDLEEALADILK 295 (297)
T ss_pred ecCCHHHHHHHHHh
Confidence 488898887764
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.4e-28 Score=213.20 Aligned_cols=227 Identities=14% Similarity=0.096 Sum_probs=170.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch--hhhcccC-CCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP--RHLKLMG-DLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~--~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
.+++|||||||||||++++++|+++|++|++++|+.+... ..+.... ...+++++.+|++|.+.+.+++.++|.|+|
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~ 84 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFC 84 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3578999999999999999999999999999999643311 1112111 113588899999999999999999999999
Q ss_pred cccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC--C------------CCC----------chHH
Q 047628 83 LIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS--S------------SSP----------SRVF 136 (327)
Q Consensus 83 ~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~--~------------~~~----------~~y~ 136 (327)
+++..... .....+++|+.++.+++++|.+...+++||++||..+. . +.+ ..|+
T Consensus 85 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~ 164 (297)
T PLN02583 85 CFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHA 164 (297)
T ss_pred eCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHH
Confidence 87654322 13467899999999999999886228899999996432 1 111 1699
Q ss_pred HhHHHHHHHHHh----hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 137 STKAAAEEAVLR----ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 137 ~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+|..+|++++. .+++++++||+.+|||....... ...+. ....+ ...++++|++|+|++++.+++.+.
T Consensus 165 ~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~----~~~~~-~~~~~--~~~~~~v~V~Dva~a~~~al~~~~ 237 (297)
T PLN02583 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP----YLKGA-AQMYE--NGVLVTVDVNFLVDAHIRAFEDVS 237 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh----hhcCC-cccCc--ccCcceEEHHHHHHHHHHHhcCcc
Confidence 999999999864 36999999999999997532211 11121 12222 234689999999999999999876
Q ss_pred CCCCceEEecCCccccHHHHHHHHHHHhh
Q 047628 213 TSMGKIYELGGPDIFTVHELAELMYDTIR 241 (327)
Q Consensus 213 ~~~~~~~~v~~~~~~s~~el~~~i~~~~g 241 (327)
. ++.|+++++......++++++.+.+.
T Consensus 238 ~--~~r~~~~~~~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 238 S--YGRYLCFNHIVNTEEDAVKLAQMLSP 264 (297)
T ss_pred c--CCcEEEecCCCccHHHHHHHHHHhCC
Confidence 5 44899998655567889999988874
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.9e-28 Score=215.04 Aligned_cols=232 Identities=16% Similarity=0.132 Sum_probs=202.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhcc--cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMAK--AN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d 78 (327)
...++||||||+|-||+.+++++++.+ .+++.++|+..+.... +.......++.++.||+.|.+.+..++++ +|
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd 327 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVD 327 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCc
Confidence 346899999999999999999999986 6899999987664322 22211125688999999999999999998 99
Q ss_pred EEEEcccccc----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhC----
Q 047628 79 VVINLIGREY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLREL---- 150 (327)
Q Consensus 79 ~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~---- 150 (327)
+|||+|+.-+ ..+|.+...+|+-||.|+++||.++| |++||.+||-.+- ++.+.||.+|+.+|+.+...+
T Consensus 328 ~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV-~PtNvmGaTKr~aE~~~~a~~~~~~ 405 (588)
T COG1086 328 IVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAV-NPTNVMGATKRLAEKLFQAANRNVS 405 (588)
T ss_pred eEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCccc-CCchHhhHHHHHHHHHHHHHhhccC
Confidence 9999999754 35678899999999999999999999 9999999998765 244789999999999998763
Q ss_pred ---CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccc
Q 047628 151 ---PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 151 ---~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~ 227 (327)
..++++|+|+|+|.....++-|.+++.+++++++ .+++-.+-|+++.|+++.++++..... .|++|.+..|+++
T Consensus 406 ~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTv-Tdp~mtRyfMTI~EAv~LVlqA~a~~~--gGeifvldMGepv 482 (588)
T COG1086 406 GTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTV-TDPDMTRFFMTIPEAVQLVLQAGAIAK--GGEIFVLDMGEPV 482 (588)
T ss_pred CCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccc-cCCCceeEEEEHHHHHHHHHHHHhhcC--CCcEEEEcCCCCe
Confidence 6789999999999999999999999999999988 578888899999999999999999876 4899999999999
Q ss_pred cHHHHHHHHHHHhh
Q 047628 228 TVHELAELMYDTIR 241 (327)
Q Consensus 228 s~~el~~~i~~~~g 241 (327)
++.|+++.+-+..|
T Consensus 483 kI~dLAk~mi~l~g 496 (588)
T COG1086 483 KIIDLAKAMIELAG 496 (588)
T ss_pred EHHHHHHHHHHHhC
Confidence 99999999999997
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=205.25 Aligned_cols=221 Identities=26% Similarity=0.324 Sum_probs=171.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREY 88 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~ 88 (327)
|+|+||||.+|+++++.|++.+++|++++|+.++. ...++.. +++++.+|+.|++++.++|+++|+||.+.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~----g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~ 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL----GAEVVEADYDDPESLVAALKGVDAVFSVTPPSH 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT----TTEEEES-TT-HHHHHHHHTTCSEEEEESSCSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc----cceEeecccCCHHHHHHHHcCCceEEeecCcch
Confidence 79999999999999999999999999999998432 2333333 478899999999999999999999998887543
Q ss_pred ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----CC-chHHHhHHHHHHHHHhhCCCeEEEecCeeec
Q 047628 89 ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS----SP-SRVFSTKAAAEEAVLRELPWATIMRPAAMIG 163 (327)
Q Consensus 89 ~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~----~~-~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G 163 (327)
. .......++++||+++| |++||+.|....+.. .| .++...|..+|+++++.+++++++|++.++
T Consensus 77 ~--------~~~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~~i~~t~i~~g~f~- 146 (233)
T PF05368_consen 77 P--------SELEQQKNLIDAAKAAG-VKHFVPSSFGADYDESSGSEPEIPHFDQKAEIEEYLRESGIPYTIIRPGFFM- 146 (233)
T ss_dssp C--------CHHHHHHHHHHHHHHHT--SEEEESEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHCTSEBEEEEE-EEH-
T ss_pred h--------hhhhhhhhHHHhhhccc-cceEEEEEecccccccccccccchhhhhhhhhhhhhhhccccceeccccchh-
Confidence 1 13466789999999999 999997666555522 22 456678999999999999999999999988
Q ss_pred CCChhHHHHHHH--Hhhc-CceeeecCCCceecce-eHHHHHHHHHHHhhcCCCC-CCceEEecCCccccHHHHHHHHHH
Q 047628 164 TEDRLLNKWAQF--VKKF-NFFPLFGDGSTRIQPV-YVVDVAAAVTAALKDDGTS-MGKIYELGGPDIFTVHELAELMYD 238 (327)
Q Consensus 164 ~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~i-~~~D~a~~~~~~l~~~~~~-~~~~~~v~~~~~~s~~el~~~i~~ 238 (327)
++++..+... .... ..+.+.++++....++ +.+|+|++++.++.++..+ .++.+.+++ +.+|++|+++.+.+
T Consensus 147 --e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~-~~~t~~eia~~~s~ 223 (233)
T PF05368_consen 147 --ENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG-ETLTYNEIAAILSK 223 (233)
T ss_dssp --HHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-GEEEHHHHHHHHHH
T ss_pred --hhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-CCCCHHHHHHHHHH
Confidence 3333322221 1111 2467777888767775 9999999999999998764 467888877 88999999999999
Q ss_pred HhhcCCccc
Q 047628 239 TIREYPHYV 247 (327)
Q Consensus 239 ~~g~~~~~~ 247 (327)
.+|+++++.
T Consensus 224 ~~G~~v~y~ 232 (233)
T PF05368_consen 224 VLGKKVKYV 232 (233)
T ss_dssp HHTSEEEEE
T ss_pred HHCCccEEe
Confidence 999987754
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.4e-27 Score=220.39 Aligned_cols=197 Identities=20% Similarity=0.167 Sum_probs=153.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+||||||+||||++|++.|+++|++|++++|.+.... .++++++.+|++++. +.+++.++|+||||++..
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~--------~~~ve~v~~Dl~d~~-l~~al~~~D~VIHLAa~~ 71 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL--------DPRVDYVCASLRNPV-LQELAGEADAVIHLAPVD 71 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc--------cCCceEEEccCCCHH-HHHHhcCCCEEEEcCccC
Confidence 58999999999999999999999999999998754311 135889999999985 788888999999999864
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCCCh
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDR 167 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~~~ 167 (327)
.. ....+|+.++.|++++|++.| + ++||+||... .+..|. .+|.++...+++++++|++.+||+...
T Consensus 72 ~~----~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~G---~~~~~~----~aE~ll~~~~~p~~ILR~~nVYGp~~~ 138 (699)
T PRK12320 72 TS----APGGVGITGLAHVANAAARAG-A-RLLFVSQAAG---RPELYR----QAETLVSTGWAPSLVIRIAPPVGRQLD 138 (699)
T ss_pred cc----chhhHHHHHHHHHHHHHHHcC-C-eEEEEECCCC---CCcccc----HHHHHHHhcCCCEEEEeCceecCCCCc
Confidence 22 123579999999999999998 6 7999998631 222232 578888877799999999999998543
Q ss_pred -----hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHH
Q 047628 168 -----LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDT 239 (327)
Q Consensus 168 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~ 239 (327)
++..+...... ...+.+||++|++++++.+++.+. +++||+++++.+|+.|+++.+...
T Consensus 139 ~~~~r~I~~~l~~~~~----------~~pI~vIyVdDvv~alv~al~~~~---~GiyNIG~~~~~Si~el~~~i~~~ 202 (699)
T PRK12320 139 WMVCRTVATLLRSKVS----------ARPIRVLHLDDLVRFLVLALNTDR---NGVVDLATPDTTNVVTAWRLLRSV 202 (699)
T ss_pred ccHhHHHHHHHHHHHc----------CCceEEEEHHHHHHHHHHHHhCCC---CCEEEEeCCCeeEHHHHHHHHHHh
Confidence 22222222211 123446999999999999998643 349999999999999999888665
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-27 Score=192.09 Aligned_cols=302 Identities=16% Similarity=0.110 Sum_probs=210.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hh--hhcccC--CCCCeeEEeeCCCChhHHHHHhcc--ccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PR--HLKLMG--DLGQIVPMKFNPRDDNTIKATMAK--ANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~--~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~--~d~ 79 (327)
+++.||||-||+-|+.|++.|++.||+|+++.|+.+.. .. .+...+ +.++++.+.+|++|..++.++++. .|-
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 57899999999999999999999999999999985432 22 222222 224588999999999999999986 599
Q ss_pred EEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCC-cceEEEEeccCCC---------CCCC----chHHHhHHH
Q 047628 80 VINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGG-IMRFIQISCLGAS---------SSSP----SRVFSTKAA 141 (327)
Q Consensus 80 vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~-v~~~v~~Ss~~v~---------~~~~----~~y~~~K~~ 141 (327)
|+|+|++++. ..|....+++..|+.+|+++.+..++ -.||...||...+ |..| +||+.+|..
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlY 161 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLY 161 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHH
Confidence 9999998754 45666778888999999999999873 2489999996443 2333 899999998
Q ss_pred HHHHHHhhCCCeEEEec-Ceee---cC--CChhH----HHHHHHHhhc-CceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 142 AEEAVLRELPWATIMRP-AAMI---GT--EDRLL----NKWAQFVKKF-NFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 142 ~E~~~~~~~~~~~i~r~-~~~~---G~--~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.-....+.-.+-++-+ |..| +| +..|+ ..-...++.+ ..-...|+-+..++|-|..|.+++++.++..
T Consensus 162 a~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq 241 (345)
T COG1089 162 AYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQ 241 (345)
T ss_pred HHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHcc
Confidence 87665544322222222 3333 22 12232 2222223333 3345558899999999999999999999998
Q ss_pred CCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCc
Q 047628 211 DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290 (327)
Q Consensus 211 ~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
+.+ ..|+++.+++.|++|+++...+..|.++...-.-......-+.......+ +.+...+....+.
T Consensus 242 ~~P---ddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~-----------idp~~fRPaEV~~ 307 (345)
T COG1089 242 EEP---DDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVE-----------IDPRYFRPAEVDL 307 (345)
T ss_pred CCC---CceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEE-----------ECccccCchhhhh
Confidence 875 78999999999999999999999996655321100000000000000000 2222233334455
Q ss_pred ccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 291 IVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 291 ~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
.+.+.+|+++.|||+|. +|+|.+++.+++..+
T Consensus 308 Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~ 340 (345)
T COG1089 308 LLGDPTKAKEKLGWRPEVSLEELVREMVEADLE 340 (345)
T ss_pred hcCCHHHHHHHcCCccccCHHHHHHHHHHHHHH
Confidence 66677899999999998 999999999887543
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-26 Score=186.62 Aligned_cols=172 Identities=27% Similarity=0.338 Sum_probs=145.9
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGREYE 89 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~ 89 (327)
|+|+||||++|+.++++|+++|++|++++|++++... .++++++.+|+.|++++.++++++|+||++++....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcc
Confidence 7999999999999999999999999999999876443 157999999999999999999999999999976443
Q ss_pred cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCc-----------hHHHhHHHHHHHHHhhCCCeEEEec
Q 047628 90 TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPS-----------RVFSTKAAAEEAVLRELPWATIMRP 158 (327)
Q Consensus 90 ~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~-----------~y~~~K~~~E~~~~~~~~~~~i~r~ 158 (327)
+...+.++++++++++ ++++|++|+.+++...+. .|...|..+|+.+++.+++|+++||
T Consensus 74 ---------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ivrp 143 (183)
T PF13460_consen 74 ---------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEALRESGLNWTIVRP 143 (183)
T ss_dssp ---------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHHHHSTSEEEEEEE
T ss_pred ---------cccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHHHhcCCCEEEEEC
Confidence 2677899999999999 999999999999876553 6889999999999999999999999
Q ss_pred CeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 159 AAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 159 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+||+... ...+ +...+....++|+.+|+|++++.++++
T Consensus 144 ~~~~~~~~~-----------~~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 144 GWIYGNPSR-----------SYRL-IKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp SEEEBTTSS-----------SEEE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred cEeEeCCCc-----------ceeE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 999987532 1111 111445667999999999999999864
|
... |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-26 Score=193.97 Aligned_cols=215 Identities=18% Similarity=0.189 Sum_probs=162.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC-hhHHHHHh-ccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD-DNTIKATM-AKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~-~~~d~vi~~a 84 (327)
+|+|+||||||+||++++++|+++|++|+++.|++++....... ..+++++.+|+++ .+.+.+.+ .++|+||+++
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ---DPSLQIVRADVTEGSDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc---CCceEEEEeeCCCCHHHHHHHhhcCCCEEEECC
Confidence 58999999999999999999999999999999987653322211 1358899999988 47787888 6899999998
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------C--------chHHHhHHHHHHHHHhhC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------P--------SRVFSTKAAAEEAVLREL 150 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------~--------~~y~~~K~~~E~~~~~~~ 150 (327)
+......+...+.+|..++.++++++++.+ +++||++||.+++... + ..|...|..+|+++++.+
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~g 172 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSG 172 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 864332333445678889999999999988 8999999998875421 1 122356889999999989
Q ss_pred CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecC---Cccc
Q 047628 151 PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG---PDIF 227 (327)
Q Consensus 151 ~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~---~~~~ 227 (327)
++++++||+++++.... +. +...........+++.+|+|++++.++.++.. .+.++.+.+ +...
T Consensus 173 i~~~iirpg~~~~~~~~-----------~~-~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 239 (251)
T PLN00141 173 INYTIVRPGGLTNDPPT-----------GN-IVMEPEDTLYEGSISRDQVAEVAVEALLCPES-SYKVVEIVARADAPKR 239 (251)
T ss_pred CcEEEEECCCccCCCCC-----------ce-EEECCCCccccCcccHHHHHHHHHHHhcChhh-cCcEEEEecCCCCCch
Confidence 99999999999865311 11 11111111234679999999999999998776 567788775 2247
Q ss_pred cHHHHHHHHHH
Q 047628 228 TVHELAELMYD 238 (327)
Q Consensus 228 s~~el~~~i~~ 238 (327)
++.+++..+++
T Consensus 240 ~~~~~~~~~~~ 250 (251)
T PLN00141 240 SYKDLFASIKQ 250 (251)
T ss_pred hHHHHHHHhhc
Confidence 88888887764
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.9e-26 Score=210.32 Aligned_cols=236 Identities=19% Similarity=0.246 Sum_probs=176.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCc--hhhhc-c-------------cC------CCCCeeEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDD--PRHLK-L-------------MG------DLGQIVPM 60 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~--~~~~~-~-------------~~------~~~~v~~~ 60 (327)
..++|+|||||||+|++|++.|++.+ .+|+++.|..... ...+. . .+ ...+++++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 46899999999999999999999865 3789999976432 11111 0 01 02468999
Q ss_pred eeCCCCh------hHHHHHhccccEEEEccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC---
Q 047628 61 KFNPRDD------NTIKATMAKANVVINLIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS--- 130 (327)
Q Consensus 61 ~~Dl~~~------~~~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~--- 130 (327)
.+|++++ +....+.+++|+|||+|+.... .+.....++|+.++.+++++|++.+.+++|||+||..++++
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G 277 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQG 277 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCC
Confidence 9999986 4556666789999999998653 34567889999999999999988754789999999755210
Q ss_pred --------------------------------------------------------------------CCchHHHhHHHH
Q 047628 131 --------------------------------------------------------------------SPSRVFSTKAAA 142 (327)
Q Consensus 131 --------------------------------------------------------------------~~~~y~~~K~~~ 142 (327)
.|+.|..+|..+
T Consensus 278 ~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~TK~lA 357 (605)
T PLN02503 278 RIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFTKAMG 357 (605)
T ss_pred eeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHHHHHH
Confidence 126799999999
Q ss_pred HHHHHhhC--CCeEEEecCee----------ecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 143 EEAVLREL--PWATIMRPAAM----------IGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 143 E~~~~~~~--~~~~i~r~~~~----------~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
|+++++.. ++++|+||+.| ++++.............+..-.++++++...++|+++.++.+++.++..
T Consensus 358 E~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~ 437 (605)
T PLN02503 358 EMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAK 437 (605)
T ss_pred HHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHh
Confidence 99999764 99999999999 4444332222222222233333778999999999999999999988432
Q ss_pred -C---CCCCCceEEecCC--ccccHHHHHHHHHHHhhc
Q 047628 211 -D---GTSMGKIYELGGP--DIFTVHELAELMYDTIRE 242 (327)
Q Consensus 211 -~---~~~~~~~~~v~~~--~~~s~~el~~~i~~~~g~ 242 (327)
. .. .+++||++++ .++++.|+.+.+.+.+..
T Consensus 438 ~~~~~~~-~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 438 HGGAAKP-EINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred hhcccCC-CCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 1 12 3689999987 789999999999987753
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.3e-25 Score=190.94 Aligned_cols=192 Identities=22% Similarity=0.228 Sum_probs=121.8
Q ss_pred EEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCc--hhhh----cccC--------CCCCeeEEeeCCCCh------hH
Q 047628 12 VFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDD--PRHL----KLMG--------DLGQIVPMKFNPRDD------NT 69 (327)
Q Consensus 12 I~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~--~~~~----~~~~--------~~~~v~~~~~Dl~~~------~~ 69 (327)
|||||||+|++|+++|++++. +|+++.|..+.. ...+ ...+ ...+++++.+|++++ +.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999876 999999987541 1112 1000 136899999999874 56
Q ss_pred HHHHhccccEEEEccccccccC-cchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC----C---------------
Q 047628 70 IKATMAKANVVINLIGREYETR-NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS----S--------------- 129 (327)
Q Consensus 70 ~~~~~~~~d~vi~~a~~~~~~~-~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~----~--------------- 129 (327)
+..+.+.+|+|||||+..+... ..+..++|+.++.++++.|.+.. .++|+|+||..+. .
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~~~~ 159 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSRPGTIEEKVYPEEEDDLD 159 (249)
T ss_dssp HHHHHHH--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HHH--EEE
T ss_pred hhccccccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCCCCcccccccccccccch
Confidence 7777788999999999865543 35688999999999999999776 6699999995331 0
Q ss_pred ---CCCchHHHhHHHHHHHHHhh----CCCeEEEecCeeecCC-------ChhHHH-HHHHHhhcCceeeecCCCceecc
Q 047628 130 ---SSPSRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTE-------DRLLNK-WAQFVKKFNFFPLFGDGSTRIQP 194 (327)
Q Consensus 130 ---~~~~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 194 (327)
..+++|..+|+.+|+++++. +++++|+||+.++|.. ..+... +...+..+.....+++++..+++
T Consensus 160 ~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~ 239 (249)
T PF07993_consen 160 PPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGDPDARLDL 239 (249)
T ss_dssp --TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB---TT--E
T ss_pred hhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCCCCceEeE
Confidence 11289999999999999875 6999999999999941 222333 33434433333355666677999
Q ss_pred eeHHHHHHHH
Q 047628 195 VYVVDVAAAV 204 (327)
Q Consensus 195 i~~~D~a~~~ 204 (327)
++++.+|++|
T Consensus 240 vPVD~va~aI 249 (249)
T PF07993_consen 240 VPVDYVARAI 249 (249)
T ss_dssp EEHHHHHHHH
T ss_pred ECHHHHHhhC
Confidence 9999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.7e-24 Score=196.60 Aligned_cols=222 Identities=21% Similarity=0.219 Sum_probs=164.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--------CC--CCCeeEEeeCCCChhHHHHHhc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--------GD--LGQIVPMKFNPRDDNTIKATMA 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--------~~--~~~v~~~~~Dl~~~~~~~~~~~ 75 (327)
..++||||||+|+||++++++|+++|++|++++|+.++........ +. ..+++++.+|+.+.+.+.+++.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg 158 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG 158 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc
Confidence 4578999999999999999999999999999999876643222111 10 1358899999999999999999
Q ss_pred cccEEEEcccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-C-------CchHHHhHHHHHHH
Q 047628 76 KANVVINLIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-S-------PSRVFSTKAAAEEA 145 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-~-------~~~y~~~K~~~E~~ 145 (327)
++|+|||++|..... .....+++|+.++.+++++|+..+ ++|||++||.++... . ...|...|..+|+.
T Consensus 159 giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~~ 237 (576)
T PLN03209 159 NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEEA 237 (576)
T ss_pred CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCccccchhhHHHHHHHHHHHHHH
Confidence 999999999865321 123457789999999999999998 999999999876421 1 14567789999999
Q ss_pred HHhhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCc
Q 047628 146 VLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225 (327)
Q Consensus 146 ~~~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~ 225 (327)
+...+++|+++|||.+.++.+.... ...+............+...|||++++.++.++....+++|.+.++.
T Consensus 238 L~~sGIrvTIVRPG~L~tp~d~~~~--------t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~ 309 (576)
T PLN03209 238 LIASGLPYTIVRPGGMERPTDAYKE--------THNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAET 309 (576)
T ss_pred HHHcCCCEEEEECCeecCCcccccc--------ccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCC
Confidence 9999999999999999876433210 01111111111122458899999999999997653368899998865
Q ss_pred c---ccHHHHHHHH
Q 047628 226 I---FTVHELAELM 236 (327)
Q Consensus 226 ~---~s~~el~~~i 236 (327)
. .++.+++..+
T Consensus 310 ~~p~~~~~~~~~~i 323 (576)
T PLN03209 310 TAPLTPMEELLAKI 323 (576)
T ss_pred CCCCCCHHHHHHhc
Confidence 3 4455555443
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-24 Score=207.33 Aligned_cols=252 Identities=15% Similarity=0.164 Sum_probs=174.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~ 83 (327)
+.|+||||||+||||++|++.|.++|++|... .+|++|.+.+...++ ++|+||||
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-----------------------~~~l~d~~~v~~~i~~~~pd~Vih~ 435 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-----------------------KGRLEDRSSLLADIRNVKPTHVFNA 435 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEee-----------------------ccccccHHHHHHHHHhhCCCEEEEC
Confidence 35799999999999999999999999987311 235667788877776 58999999
Q ss_pred cccccc-------cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC---------------CC----CC-chHH
Q 047628 84 IGREYE-------TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS---------------SS----SP-SRVF 136 (327)
Q Consensus 84 a~~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~---------------~~----~~-~~y~ 136 (327)
|+.... .++...+++|+.++.+|+++|++.| ++ ++++||..++ |+ .+ +.|+
T Consensus 436 Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g-~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg 513 (668)
T PLN02260 436 AGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENG-LL-MMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYS 513 (668)
T ss_pred CcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC-Ce-EEEEcccceecCCcccccccCCCCCcCCCCCCCCChhh
Confidence 997631 2456788999999999999999999 75 5666664332 11 12 6899
Q ss_pred HhHHHHHHHHHhhCCCeEEEecCeeecCCChhHHHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHHHhhcCCCCC
Q 047628 137 STKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM 215 (327)
Q Consensus 137 ~~K~~~E~~~~~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 215 (327)
.+|+++|++++.+ .+..++|+.++||........+...+.+.. .+.++ .+..+++|++.+++.+++.+ .
T Consensus 514 ~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~~~~~~~~~vp------~~~~~~~~~~~~~~~l~~~~---~ 583 (668)
T PLN02260 514 KTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIP------NSMTVLDELLPISIEMAKRN---L 583 (668)
T ss_pred HHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHHhccceeeccC------CCceehhhHHHHHHHHHHhC---C
Confidence 9999999999887 578889999999643111122333333322 23331 24677788998888888743 2
Q ss_pred CceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCC
Q 047628 216 GKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295 (327)
Q Consensus 216 ~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (327)
+++||+++++.+|+.|+++.+.+.++....+.+++..... + ... -|.| ...++.
T Consensus 584 ~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~------~--~~~----a~rp-------------~~~l~~- 637 (668)
T PLN02260 584 RGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQA------K--VIV----APRS-------------NNEMDA- 637 (668)
T ss_pred CceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhh------h--Hhh----CCCc-------------cccccH-
Confidence 5799999999999999999999987522223333311110 0 000 1111 124454
Q ss_pred cccccccCCccccccCccHHHHHH
Q 047628 296 ALTFQDLGIVPHKLKGYPTEYLIW 319 (327)
Q Consensus 296 ~~~~~~lg~~p~~~~~~l~~~~~~ 319 (327)
+|.++.+|. +.+|+|++++++..
T Consensus 638 ~k~~~~~~~-~~~~~~~l~~~~~~ 660 (668)
T PLN02260 638 SKLKKEFPE-LLSIKESLIKYVFE 660 (668)
T ss_pred HHHHHhCcc-ccchHHHHHHHHhh
Confidence 477778899 88999999888753
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.3e-23 Score=179.13 Aligned_cols=228 Identities=29% Similarity=0.285 Sum_probs=182.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+||||||||++|++++++|+++|++|++++|+++...... ..+++..+|+.++..+...++|+|.++++.+..
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~ 74 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLL 74 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhccccEEEEEeccc
Confidence 57999999999999999999999999999999988754332 368999999999999999999999999998765
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCCCh
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDR 167 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~~~ 167 (327)
. ... ...........+..+.+. .+ +++++++|..++...++..|..+|..+|+.+.+.+++++++|+..+|.....
T Consensus 75 ~-~~~-~~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~e~~l~~sg~~~t~lr~~~~~~~~~~ 150 (275)
T COG0702 75 D-GSD-AFRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGADAASPSALARAKAAVEAALRSSGIPYTTLRRAAFYLGAGA 150 (275)
T ss_pred c-ccc-chhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCCCCCCccHHHHHHHHHHHHHHhcCCCeEEEecCeeeeccch
Confidence 5 333 334444444455555554 44 7899999999999889999999999999999999999999997777754333
Q ss_pred hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc
Q 047628 168 LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247 (327)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~ 247 (327)
.. .........+... .+...++++..+|++.++...+..+.. .+++|.+++++..+..|+++.+.+..|++....
T Consensus 151 ~~--~~~~~~~~~~~~~--~~~~~~~~i~~~d~a~~~~~~l~~~~~-~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~~ 225 (275)
T COG0702 151 AF--IEAAEAAGLPVIP--RGIGRLSPIAVDDVAEALAAALDAPAT-AGRTYELAGPEALTLAELASGLDYTIGRPVGLI 225 (275)
T ss_pred hH--HHHHHhhCCceec--CCCCceeeeEHHHHHHHHHHHhcCCcc-cCcEEEccCCceecHHHHHHHHHHHhCCcceee
Confidence 22 1122222222222 233478999999999999999998876 789999999999999999999999999998886
Q ss_pred cCC
Q 047628 248 KVP 250 (327)
Q Consensus 248 ~~~ 250 (327)
+.+
T Consensus 226 ~~~ 228 (275)
T COG0702 226 PEA 228 (275)
T ss_pred CCc
Confidence 555
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.5e-24 Score=168.46 Aligned_cols=262 Identities=18% Similarity=0.157 Sum_probs=194.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
+++|||+|++|.+|+++.+-+.+.|. +-+++.- .-.+|+++.++.+++|+. ...|||
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-------------------skd~DLt~~a~t~~lF~~ekPthVIh 61 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-------------------SKDADLTNLADTRALFESEKPTHVIH 61 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-------------------cccccccchHHHHHHHhccCCceeee
Confidence 47999999999999999999998875 3222211 115688888888888864 689999
Q ss_pred ccccccc-----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC----------------C--chHHHhH
Q 047628 83 LIGREYE-----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS----------------P--SRVFSTK 139 (327)
Q Consensus 83 ~a~~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~----------------~--~~y~~~K 139 (327)
+|++..+ ..+.+++..|+....|++..|-..| +++++++.|...+++. | ..|+.+|
T Consensus 62 lAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~gYsyAK 140 (315)
T KOG1431|consen 62 LAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFGYSYAK 140 (315)
T ss_pred hHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhc-hhhhhhhcceeecCCCCCCCCCHHHhccCCCCCCchHHHHHH
Confidence 9987543 4567899999999999999999999 9999988887664321 1 5688888
Q ss_pred HHHHHHH----HhhCCCeEEEecCeeecCCCh-------hHHHHHHHH----hhc-CceeeecCCCceecceeHHHHHHH
Q 047628 140 AAAEEAV----LRELPWATIMRPAAMIGTEDR-------LLNKWAQFV----KKF-NFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 140 ~~~E~~~----~~~~~~~~i~r~~~~~G~~~~-------~~~~~~~~~----~~~-~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
+.+.-.- .+.+..++.+-|..+|||.++ .++.++... ..+ ..+.++|+|...+.|+|++|+|++
T Consensus 141 r~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l 220 (315)
T KOG1431|consen 141 RMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADL 220 (315)
T ss_pred HHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHH
Confidence 6654433 445689999999999999654 345444433 222 378999999999999999999999
Q ss_pred HHHHhhcCCCCCCceEEecCCc--cccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHH
Q 047628 204 VTAALKDDGTSMGKIYELGGPD--IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD 281 (327)
Q Consensus 204 ~~~~l~~~~~~~~~~~~v~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
+++++.+=+. -+-.+++.++ -+|++|+++.+.++.+-..+...-. .++ +
T Consensus 221 ~i~vlr~Y~~--vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~Dt----------------------tK~-----D 271 (315)
T KOG1431|consen 221 FIWVLREYEG--VEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDT----------------------TKS-----D 271 (315)
T ss_pred HHHHHHhhcC--ccceEeccCccceeEHHHHHHHHHHHhCCCceEEeec----------------------cCC-----C
Confidence 9999997553 3567777766 6999999999999998655433111 010 0
Q ss_pred HHHhhhcCcccCCCcccccccCCccc--cccCccHHHHHHHhhC
Q 047628 282 EINAYTSDTIVSDNALTFQDLGIVPH--KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~lg~~p~--~~~~~l~~~~~~~~~~ 323 (327)
. +.....++ +|. ..|+|.|+ +|++++.++++||.++
T Consensus 272 G----q~kKtasn-sKL-~sl~pd~~ft~l~~ai~~t~~Wy~~N 309 (315)
T KOG1431|consen 272 G----QFKKTASN-SKL-RSLLPDFKFTPLEQAISETVQWYLDN 309 (315)
T ss_pred C----Ccccccch-HHH-HHhCCCcccChHHHHHHHHHHHHHHh
Confidence 0 11223343 354 66788886 6999999999999764
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=9.7e-24 Score=219.36 Aligned_cols=245 Identities=17% Similarity=0.143 Sum_probs=182.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC----CEEEEeeCCCCCchh--hhcc----cC-----CCCCeeEEeeCCCC-----
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG----SQVLVPFRGCEDDPR--HLKL----MG-----DLGQIVPMKFNPRD----- 66 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~--~~~~----~~-----~~~~v~~~~~Dl~~----- 66 (327)
.++|+|||||||+|+++++.|++++ ++|+++.|....... .+.. .+ ...+++++.+|+.+
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4789999999999999999999876 899999997654211 1110 00 01368899999964
Q ss_pred -hhHHHHHhccccEEEEccccccccCcc-hhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC--------------
Q 047628 67 -DNTIKATMAKANVVINLIGREYETRNY-SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------- 130 (327)
Q Consensus 67 -~~~~~~~~~~~d~vi~~a~~~~~~~~~-~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------- 130 (327)
.+.+.++..++|+|||+|+......+. .+...|+.++.+++++|++.+ +++|+|+||.+++..
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~~~~~~~~ 1129 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLSDELVQAG 1129 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchhhhhhhcc
Confidence 456777778899999999986543333 344679999999999999987 899999999765421
Q ss_pred ----------------CCchHHHhHHHHHHHHHhh---CCCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceee
Q 047628 131 ----------------SPSRVFSTKAAAEEAVLRE---LPWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPL 184 (327)
Q Consensus 131 ----------------~~~~y~~~K~~~E~~~~~~---~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~ 184 (327)
..+.|+.+|+.+|.++..+ +++++++||+.++|+.. .++..+.......+.++
T Consensus 1130 ~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p- 1208 (1389)
T TIGR03443 1130 GAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLGLIP- 1208 (1389)
T ss_pred CCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhCCcC-
Confidence 0146999999999998764 59999999999999843 23344443333333333
Q ss_pred ecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHH
Q 047628 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKA 256 (327)
Q Consensus 185 ~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~ 256 (327)
+....+++++++|++++++.++..+.. ..+.+||++++..+++.++++.+.+. |.+.+..+.+.|..+.
T Consensus 1209 --~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~w~~~l 1278 (1389)
T TIGR03443 1209 --NINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIVDYVHWRKSL 1278 (1389)
T ss_pred --CCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCccCHHHHHHHH
Confidence 345568999999999999999876542 13468999998899999999999764 7776666666666644
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.3e-23 Score=177.99 Aligned_cols=220 Identities=17% Similarity=0.147 Sum_probs=161.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
++++|||||+|+||++++++|+++|++|+++.|+.+.......... .++.++.+|+++.+++.++++ ++|+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG--DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV 79 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999999999999999999998654322212111 368889999999998887664 3799
Q ss_pred EEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 80 VINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 80 vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
|||++|...... ....+++|+.++.++++++ ++.+ ..++|++||.+.....| +.|+.+|.++|.+
T Consensus 80 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 158 (276)
T PRK06482 80 VVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAYPGFSLYHATKWGIEGF 158 (276)
T ss_pred EEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCCCCCchhHHHHHHHHHH
Confidence 999998753211 1346678999999999997 5555 67999999977644333 7899999999987
Q ss_pred HHhh-------CCCeEEEecCee---ecCCCh-----------hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 146 VLRE-------LPWATIMRPAAM---IGTEDR-----------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~---~G~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
++.+ +++++++||+.+ ||++.. ....+...+. .+.+. -+.+++|+++++
T Consensus 159 ~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---------~~~d~~~~~~a~ 228 (276)
T PRK06482 159 VEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALA-DGSFA---------IPGDPQKMVQAM 228 (276)
T ss_pred HHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHh-hccCC---------CCCCHHHHHHHH
Confidence 7543 589999999987 554211 0111222111 11111 135789999999
Q ss_pred HHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhh
Q 047628 205 TAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241 (327)
Q Consensus 205 ~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g 241 (327)
+.+++.+.. +..||+++++..+..|+++.+.+.++
T Consensus 229 ~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 229 IASADQTPA--PRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHcCCCC--CeEEecChHHHHHHHHHHHHHHHHHH
Confidence 999986654 56899999888999988888877775
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=7.1e-23 Score=175.84 Aligned_cols=221 Identities=12% Similarity=0.075 Sum_probs=155.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC-CCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD-LGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
++++++|||||+|+||+++++.|+++|++|+++.|+++......+...+ ..++.++++|+++++++.++++.
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999987654333222111 13578899999999988877653
Q ss_pred ccEEEEcccccccc----Cc----chhHhhhhHH----HHHHHHHH-HHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 77 ANVVINLIGREYET----RN----YSFEDVNHFM----AERIAGIA-KEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~~----~~----~~~~~~n~~~----~~~l~~a~-~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
+|+||||++..... .+ ...+++|+.+ +.++++++ +..+ .+++|++||.......+ ..|+.+|..
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~y~~sk~a 163 (262)
T PRK13394 85 VDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEASPLKSAYVTAKHG 163 (262)
T ss_pred CCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCCCCCcccHHHHHH
Confidence 79999999874321 11 2455678888 66677777 6666 78999999976654433 679999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHh---hcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVK---KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+++.+ +++++++||+.++++... .+........ ......+++.+....++++++|++++++.++..
T Consensus 164 ~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~ 243 (262)
T PRK13394 164 LLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLFLSSF 243 (262)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHcCc
Confidence 98877643 488999999999977421 1111111000 000011222344457899999999999999986
Q ss_pred CCC-CCCceEEecCCcc
Q 047628 211 DGT-SMGKIYELGGPDI 226 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~ 226 (327)
+.. ..|+.|+++++..
T Consensus 244 ~~~~~~g~~~~~~~g~~ 260 (262)
T PRK13394 244 PSAALTGQSFVVSHGWF 260 (262)
T ss_pred cccCCcCCEEeeCCcee
Confidence 543 1478899988643
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3e-22 Score=171.43 Aligned_cols=226 Identities=16% Similarity=0.173 Sum_probs=161.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCch--hhhcc-c--------CCCCCeeEEeeCCCC------hhH
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDP--RHLKL-M--------GDLGQIVPMKFNPRD------DNT 69 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~--~~~~~-~--------~~~~~v~~~~~Dl~~------~~~ 69 (327)
+++|+||||||+|++|+.+|+.+- .+|+|++|..+... ..+.. . ....+++++.+|+.. ...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 479999999999999999999864 59999999877421 11111 0 112579999999974 467
Q ss_pred HHHHhccccEEEEccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-----------------
Q 047628 70 IKATMAKANVVINLIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS----------------- 131 (327)
Q Consensus 70 ~~~~~~~~d~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~----------------- 131 (327)
+.++.+.+|.|||+++..+. .+..++...|+.||..+++.|.... .|.++|+||+++.+..
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~ 159 (382)
T COG3320 81 WQELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFDEISPTRN 159 (382)
T ss_pred HHHHhhhcceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCcccccccccccc
Confidence 88888889999999987653 3445788899999999999999876 7889999998873211
Q ss_pred -----CchHHHhHHHHHHHHHhhC---CCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCceeccee
Q 047628 132 -----PSRVFSTKAAAEEAVLREL---PWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVY 196 (327)
Q Consensus 132 -----~~~y~~~K~~~E~~~~~~~---~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 196 (327)
.++|++||+.+|..+++.+ ++++|+|||.+.|... +++.++...+.+.+.+|- .....+.+.
T Consensus 160 ~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~---~~~~~~~~p 236 (382)
T COG3320 160 VGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPD---SEYSLDMLP 236 (382)
T ss_pred ccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCC---cccchhhCc
Confidence 1789999999999999874 8999999999999743 456667666666655552 222233333
Q ss_pred HHHH-----------HHHHHHHhhcCCCCCCceEE-ecCCccccHHHHHHHHHH
Q 047628 197 VVDV-----------AAAVTAALKDDGTSMGKIYE-LGGPDIFTVHELAELMYD 238 (327)
Q Consensus 197 ~~D~-----------a~~~~~~l~~~~~~~~~~~~-v~~~~~~s~~el~~~i~~ 238 (327)
++++ ++++..+...+.. .-..|. ..-|..+...++.+.+.+
T Consensus 237 ~~~v~~~v~~~~~~~~~~~~~l~~~~~~-~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 237 VDHVARAVVAPSVQVAEAIAALGAHSDI-RFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred cceeeEEeehhhhhHHHHHHHhccCccc-hhhheecccCCCccchhHHHHhHhh
Confidence 3333 3333333322222 112333 333678999999998888
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.3e-22 Score=171.29 Aligned_cols=233 Identities=15% Similarity=0.120 Sum_probs=165.2
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc---cCCCCCeeEEeeCCCChhHHHHHhc--
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---MGDLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
|.+.|.+++++||||+|+||+++++.|+++|++|+++.|+.+........ .....++.++.+|+.+++++.++++
T Consensus 1 ~~~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 80 (276)
T PRK05875 1 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAA 80 (276)
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHH
Confidence 45566679999999999999999999999999999999986543222211 1111367888999999998887765
Q ss_pred -----cccEEEEccccccc------cC---cchhHhhhhHHHHHHHHHHHHcC---CcceEEEEeccCCCCCCC--chHH
Q 047628 76 -----KANVVINLIGREYE------TR---NYSFEDVNHFMAERIAGIAKEHG---GIMRFIQISCLGASSSSP--SRVF 136 (327)
Q Consensus 76 -----~~d~vi~~a~~~~~------~~---~~~~~~~n~~~~~~l~~a~~~~~---~v~~~v~~Ss~~v~~~~~--~~y~ 136 (327)
.+|+|||++|.... .+ ....+++|+.++.++++++.+.. +..+|+++||.......+ +.|+
T Consensus 81 ~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 160 (276)
T PRK05875 81 TAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYG 160 (276)
T ss_pred HHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchH
Confidence 57999999985321 11 12456778899988888765431 135899999987765444 6899
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
.+|.+.|.+++.+ +++++++||+.+.++..... ......... ......+++++|+|+++..
T Consensus 161 ~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ 231 (276)
T PRK05875 161 VTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRA---------CTPLPRVGEVEDVANLAMF 231 (276)
T ss_pred HHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHc---------CCCCCCCcCHHHHHHHHHH
Confidence 9999999998764 38899999998865422110 011111110 0111345679999999999
Q ss_pred HhhcCCC-CCCceEEecCCccc----cHHHHHHHHHHHhhc
Q 047628 207 ALKDDGT-SMGKIYELGGPDIF----TVHELAELMYDTIRE 242 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~~~----s~~el~~~i~~~~g~ 242 (327)
++..+.. ..|++|++++++.+ +..|+++.+.+..|.
T Consensus 232 l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 272 (276)
T PRK05875 232 LLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADGL 272 (276)
T ss_pred HcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHHH
Confidence 9987553 14889999998876 778888877766553
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=7e-22 Score=168.15 Aligned_cols=214 Identities=20% Similarity=0.147 Sum_probs=153.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+++++||||||||+||++++++|+++|++|+++.|+.......+... ....++.++.+|+.+++++.++++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 83 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG 83 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence 45679999999999999999999999999988888765432222110 011468899999999998887764
Q ss_pred cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|+|||++|...... .....++|+.++.++++++ ++.+ ++++|++||.......+ ..|+.+|..
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~~~~~y~~sK~~ 162 (249)
T PRK12825 84 RIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWPGRSNYAAAKAG 162 (249)
T ss_pred CCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCCCchHHHHHHHH
Confidence 4699999999643221 1345678888888888887 4556 78999999987654433 679999998
Q ss_pred HHHHHHh-------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 142 AEEAVLR-------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 142 ~E~~~~~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.|.+++. .+++++++||+.++|+.......... .......+ ...+++.+|+++++..++..+..
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~dva~~~~~~~~~~~~~ 234 (249)
T PRK12825 163 LVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAR-EAKDAETP-------LGRSGTPEDIARAVAFLCSDASDY 234 (249)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhH-HhhhccCC-------CCCCcCHHHHHHHHHHHhCccccC
Confidence 8877653 35999999999999875322111000 00000111 22388999999999999976531
Q ss_pred CCCceEEecCCccc
Q 047628 214 SMGKIYELGGPDIF 227 (327)
Q Consensus 214 ~~~~~~~v~~~~~~ 227 (327)
..|+.|+++++..+
T Consensus 235 ~~g~~~~i~~g~~~ 248 (249)
T PRK12825 235 ITGQVIEVTGGVDV 248 (249)
T ss_pred cCCCEEEeCCCEee
Confidence 26899999987654
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1e-22 Score=176.08 Aligned_cols=226 Identities=15% Similarity=0.125 Sum_probs=161.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
++++|+||||+|+||++++++|+++|++|++++|+.+.......... ..+..+++|+++++++.++++ .+|
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 79 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG--DRLLPLALDVTDRAAVFAAVETAVEHFGRLD 79 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc--CCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 45789999999999999999999999999999998655332222211 357888999999988877664 469
Q ss_pred EEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+||||+|..... .....+++|+.++..+++++ ++.+ .+++|++||.......+ ..|+.+|...+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~ 158 (275)
T PRK08263 80 IVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPMSGIYHASKWALEG 158 (275)
T ss_pred EEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCCccHHHHHHHHHHH
Confidence 999999975321 11346788999987777765 5555 67999999977654444 689999999887
Q ss_pred HHHh-------hCCCeEEEecCeeecCCCh-------hHHHHHHHHhhcCceeeecCCCceecc-eeHHHHHHHHHHHhh
Q 047628 145 AVLR-------ELPWATIMRPAAMIGTEDR-------LLNKWAQFVKKFNFFPLFGDGSTRIQP-VYVVDVAAAVTAALK 209 (327)
Q Consensus 145 ~~~~-------~~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~a~~~~~~l~ 209 (327)
+.+. .+++++++|||.+..+... ....+.. .... + ........+ ++.+|++++++.+++
T Consensus 159 ~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~-~~~~--~---~~~~~~~~~~~~p~dva~~~~~l~~ 232 (275)
T PRK08263 159 MSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDT-LREE--L---AEQWSERSVDGDPEAAAEALLKLVD 232 (275)
T ss_pred HHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhh-HHHH--H---HHHHHhccCCCCHHHHHHHHHHHHc
Confidence 7654 3599999999988654211 0011111 0000 0 000111234 789999999999999
Q ss_pred cCCCCCCceEEecCCccccHHHHHHHHHHHhh
Q 047628 210 DDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241 (327)
Q Consensus 210 ~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g 241 (327)
.+.. .++.|+..+++.+++.++.+.+.+..+
T Consensus 233 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 233 AENP-PLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred CCCC-CeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 8876 556666666678999999999888643
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=6e-21 Score=162.56 Aligned_cols=214 Identities=17% Similarity=0.148 Sum_probs=147.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc-ccC--CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMG--DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~--~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+.++||||||+|+||++++++|+++|++|++++|+.......+. ... ....+.++.+|+++.+++.++++
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 44789999999999999999999999999999987543222211 110 01257889999999999888776
Q ss_pred cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCC-CC-chHHHhHHHHH
Q 047628 76 KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSS-SP-SRVFSTKAAAE 143 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~-~~-~~y~~~K~~~E 143 (327)
++|+|||++|..... .....+++|+.++.++++++...- .-..++.+|+...... .+ ..|+.+|..+|
T Consensus 85 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~ 164 (249)
T PRK09135 85 RLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALE 164 (249)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHH
Confidence 369999999863221 124577899999999999986421 0135666666443322 22 78999999999
Q ss_pred HHHHhh------CCCeEEEecCeeecCCChh-HHH-HHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCC
Q 047628 144 EAVLRE------LPWATIMRPAAMIGTEDRL-LNK-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM 215 (327)
Q Consensus 144 ~~~~~~------~~~~~i~r~~~~~G~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 215 (327)
.+++.+ +++++++||+.++|+.+.. +.. ..........+. .+.+++|+|+++..++.......
T Consensus 165 ~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~d~a~~~~~~~~~~~~~~ 235 (249)
T PRK09135 165 MLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLK---------RIGTPEDIAEAVRFLLADASFIT 235 (249)
T ss_pred HHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcC---------CCcCHHHHHHHHHHHcCcccccc
Confidence 998764 3889999999999986431 122 222222121111 12247999999976665432226
Q ss_pred CceEEecCCcccc
Q 047628 216 GKIYELGGPDIFT 228 (327)
Q Consensus 216 ~~~~~v~~~~~~s 228 (327)
|++|++++++.++
T Consensus 236 g~~~~i~~g~~~~ 248 (249)
T PRK09135 236 GQILAVDGGRSLT 248 (249)
T ss_pred CcEEEECCCeecc
Confidence 8899999987654
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.6e-21 Score=165.00 Aligned_cols=211 Identities=20% Similarity=0.158 Sum_probs=152.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++|+||||+|++|++++++|+++|++|++++|+.++......... ...++.++.+|+.+++++.++++ .
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 446899999999999999999999999999999998654322222111 11358889999999998888775 5
Q ss_pred ccEEEEccccccc-----cC---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCC-CCCC--chHHHhHHH
Q 047628 77 ANVVINLIGREYE-----TR---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGAS-SSSP--SRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~-----~~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~-~~~~--~~y~~~K~~ 141 (327)
+|+|||+++.... .. ....+++|+.++.++++++. +.+ .++||++||.... ...+ ..|+.+|.+
T Consensus 84 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~~y~~sK~a 162 (251)
T PRK12826 84 LDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGYPGLAHYAASKAG 162 (251)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCCCCccHHHHHHHH
Confidence 7999999987542 11 13467888999998988774 445 6789999998765 2222 679999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH-HHH-HHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKW-AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+|.+++.. +++++++||+.++|+..... ... ....... .++ ..+++++|+|.++..++....
T Consensus 163 ~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~dva~~~~~l~~~~~ 233 (251)
T PRK12826 163 LVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAA--IPL-------GRLGEPEDIAAAVLFLASDEA 233 (251)
T ss_pred HHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCccc
Confidence 88887653 58999999999998753221 111 1111111 111 257899999999999887654
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|+.|++.++.
T Consensus 234 ~~~~g~~~~~~~g~ 247 (251)
T PRK12826 234 RYITGQTLPVDGGA 247 (251)
T ss_pred cCcCCcEEEECCCc
Confidence 2 158899998864
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.2e-21 Score=165.18 Aligned_cols=218 Identities=15% Similarity=0.084 Sum_probs=150.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
|.+++++||||||+||++++++|+++|++|++++|++++......... ...+++.+.+|+.+++++.++++ +
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999999999999998765433222111 11468889999999998887765 4
Q ss_pred ccEEEEccccccccC----c----chhHhhhhHH----HHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR----N----YSFEDVNHFM----AERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~----~----~~~~~~n~~~----~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||+++...... + ...+++|+.+ +..+++++++.+ .++||++||.......+ ..|+.+|.+.
T Consensus 82 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~~k~a~ 160 (258)
T PRK12429 82 VDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSAGKAAYVSAKHGL 160 (258)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence 799999998643211 1 2355678777 445555556666 78999999976543333 7899999988
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcC-c-----eeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN-F-----FPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+.+.+.. ++.+.++||+.+.++.... .+.......+ . ...++.......+++++|+|+++..++.
T Consensus 161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~ 238 (258)
T PRK12429 161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRK--QIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLAS 238 (258)
T ss_pred HHHHHHHHHHhcccCeEEEEEecCCCcchhhhh--hhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcC
Confidence 8777543 4889999999998764211 1111110000 0 0011122234579999999999999997
Q ss_pred cCCC-CCCceEEecCCc
Q 047628 210 DDGT-SMGKIYELGGPD 225 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~ 225 (327)
.... ..|+.|++.++-
T Consensus 239 ~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 239 FAAKGVTGQAWVVDGGW 255 (258)
T ss_pred ccccCccCCeEEeCCCE
Confidence 6442 157899998863
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.4e-21 Score=164.08 Aligned_cols=214 Identities=20% Similarity=0.181 Sum_probs=150.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
++.++++||||+|+||++++++|+++|++|++++|+.+..... +...+ .++..+++|+++++++.++++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAG--GRASAVGADLTDEESVAALMDTAREE 81 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4458999999999999999999999999999999976432211 11111 357889999999998877665
Q ss_pred --cccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCC-----CCCC--chHHHhHHHHH
Q 047628 76 --KANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGAS-----SSSP--SRVFSTKAAAE 143 (327)
Q Consensus 76 --~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~-----~~~~--~~y~~~K~~~E 143 (327)
++|+|||+++.... ..+...+++|+.++.++++++...- ...++|++||.... +..+ ..|+.+|.++|
T Consensus 82 ~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e 161 (248)
T PRK07806 82 FGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGE 161 (248)
T ss_pred CCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHH
Confidence 47999999986422 2344567889999999999998652 12489999995432 1222 68999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG 216 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 216 (327)
.+++.+ ++++.+++|+.+-++. ...+.. +..+-...........+++++|+|++++.+++.+.. .|
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~-~g 234 (248)
T PRK07806 162 DALRALRPELAEKGIGFVVVSGDMIEGTV---TATLLN---RLNPGAIEARREAAGKLYTVSEFAAEVARAVTAPVP-SG 234 (248)
T ss_pred HHHHHHHHHhhccCeEEEEeCCccccCch---hhhhhc---cCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhcccc-Cc
Confidence 998774 3788888888765431 111110 000000000000123689999999999999997765 78
Q ss_pred ceEEecCCccc
Q 047628 217 KIYELGGPDIF 227 (327)
Q Consensus 217 ~~~~v~~~~~~ 227 (327)
++|++++++..
T Consensus 235 ~~~~i~~~~~~ 245 (248)
T PRK07806 235 HIEYVGGADYF 245 (248)
T ss_pred cEEEecCccce
Confidence 99999998643
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.8e-21 Score=161.83 Aligned_cols=213 Identities=17% Similarity=0.109 Sum_probs=151.5
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
.|++++|+||||+|++|+++++.|+++|++|+++.|++.+......... ...++.++.+|+.+++++.+++++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4456799999999999999999999999999999998765322221111 113578889999999988777754
Q ss_pred -ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC--CCchHHHhHHH
Q 047628 77 -ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS--SPSRVFSTKAA 141 (327)
Q Consensus 77 -~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~ 141 (327)
+|+|||++|...... ....++.|+.++.++++++. +.+ ++++|++||...... ....|..+|..
T Consensus 82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~~~~~y~~sk~~ 160 (246)
T PRK05653 82 ALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNPGQTNYSAAKAG 160 (246)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCCCCcHhHhHHHH
Confidence 599999998743311 13456788889888888874 455 789999999754322 23679999998
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.|.+.+.. +++++++||+.++++....+......... ..++ ...+++.+|+++++..++.....
T Consensus 161 ~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~dva~~~~~~~~~~~~~ 232 (246)
T PRK05653 161 VIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEIL-KEIP-------LGRLGQPEEVANAVAFLASDAASY 232 (246)
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHH-hcCC-------CCCCcCHHHHHHHHHHHcCchhcC
Confidence 87776553 48999999999998755432222111110 0111 24578899999999999875332
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..++.|++++++
T Consensus 233 ~~g~~~~~~gg~ 244 (246)
T PRK05653 233 ITGQVIPVNGGM 244 (246)
T ss_pred ccCCEEEeCCCe
Confidence 157899999875
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.4e-20 Score=161.40 Aligned_cols=213 Identities=15% Similarity=0.130 Sum_probs=145.9
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+..+.+++++||||+|+||++++++|+++|++|++++|+... ....... ....++.++.+|+++++++.++++
T Consensus 3 ~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (260)
T PRK12823 3 NQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELV-HEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA 81 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHH-HHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 444667899999999999999999999999999999997432 1111111 111357788999999888776664
Q ss_pred --cccEEEEccccccccC------c---chhHhhhhHHHHHH----HHHHHHcCCcceEEEEeccCCCCCCCchHHHhHH
Q 047628 76 --KANVVINLIGREYETR------N---YSFEDVNHFMAERI----AGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKA 140 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~------~---~~~~~~n~~~~~~l----~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~ 140 (327)
++|++||+||...... . ...+++|+.++..+ ++.+++.+ ..++|++||...+.....+|+.+|.
T Consensus 82 ~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~Y~~sK~ 160 (260)
T PRK12823 82 FGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRGINRVPYSAAKG 160 (260)
T ss_pred cCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccCCCCCccHHHHH
Confidence 4799999998532111 1 23456777666544 44455555 5689999998776555578999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChh--------------HHHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRL--------------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
+.+.+.+.+ ++++.+++||.++++.... ...+........++ ..+.+.+|
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~d 231 (260)
T PRK12823 161 GVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM---------KRYGTIDE 231 (260)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc---------ccCCCHHH
Confidence 999887654 5899999999999863111 11111111111111 23446899
Q ss_pred HHHHHHHHhhcCCC-CCCceEEecCCc
Q 047628 200 VAAAVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 200 ~a~~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
+|++++.++..... ..|+.|++.+++
T Consensus 232 va~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 232 QVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred HHHHHHHHcCcccccccCcEEeecCCC
Confidence 99999998875432 258899998765
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-21 Score=162.34 Aligned_cols=215 Identities=18% Similarity=0.098 Sum_probs=148.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHh-------ccccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATM-------AKANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~-------~~~d~ 79 (327)
+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++..+.+|+.+++++..++ .++|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999999999998654322211110 1135888999999999665544 34799
Q ss_pred EEEcccccccc-----Cc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 80 VINLIGREYET-----RN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 80 vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
|||+++..... ++ ...+..|+.++..+++++ ++.+ ++++|++||.......+ ..|+.+|...|.+
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~ 160 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPFKSAYVAAKHGLIGL 160 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCCCchhHHHHHHHHHH
Confidence 99999874321 11 234567888877777766 5556 78999999976544333 6799999988877
Q ss_pred HHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCce------eeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF------PLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.. +++++++||+.++++.... .+.......... .....+....++++++|+|++++.++....
T Consensus 161 ~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~ 238 (255)
T TIGR01963 161 TKVLALEVAAHGITVNAICPGYVRTPLVEK--QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAA 238 (255)
T ss_pred HHHHHHHhhhcCeEEEEEecCccccHHHHH--HHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCccc
Confidence 7643 5899999999998763211 011111100000 001123445679999999999999998642
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|+.|+++++.
T Consensus 239 ~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 239 AGITGQAIVLDGGW 252 (255)
T ss_pred cCccceEEEEcCcc
Confidence 2 157899998864
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.2e-20 Score=163.41 Aligned_cols=210 Identities=19% Similarity=0.131 Sum_probs=144.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
++++++||||+|+||++++++|+++|++|++++|++++........+ .++..+.+|+++++++.++++ .+|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHP--DRALARLLDVTDFDAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcC--CCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 35789999999999999999999999999999998765322211111 357888999999998887775 479
Q ss_pred EEEEccccccccC----c----chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYETR----N----YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|||+||...... + ...+++|+.++.++++++. +.+ ..++|++||.......| ..|+.+|..+|.
T Consensus 81 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~ 159 (277)
T PRK06180 81 VLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMPGIGYYCGSKFALEG 159 (277)
T ss_pred EEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCCCcchhHHHHHHHHH
Confidence 9999999743211 1 2357899999999999853 344 56899999976654333 789999999988
Q ss_pred HHHhh-------CCCeEEEecCeeecCCCh--------hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDR--------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+.+.. +++++++||+.+.++... ....+...............+ ..+.+++|+|++++.+++
T Consensus 160 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~dva~~~~~~l~ 236 (277)
T PRK06180 160 ISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG---KQPGDPAKAAQAILAAVE 236 (277)
T ss_pred HHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc---CCCCCHHHHHHHHHHHHc
Confidence 77553 599999999998754210 111111111000000000111 245678999999999999
Q ss_pred cCCCCCCceEEecC
Q 047628 210 DDGTSMGKIYELGG 223 (327)
Q Consensus 210 ~~~~~~~~~~~v~~ 223 (327)
.+.. +..|.++.
T Consensus 237 ~~~~--~~~~~~g~ 248 (277)
T PRK06180 237 SDEP--PLHLLLGS 248 (277)
T ss_pred CCCC--CeeEeccH
Confidence 8765 34455544
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-21 Score=161.01 Aligned_cols=209 Identities=18% Similarity=0.137 Sum_probs=152.8
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
|.+.++.+++|||||||+||+++++.|+++|++|++++|++.+.......... ..++.+.+|+.+.+++.++++
T Consensus 1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-cCceEEEeecCCHHHHHHHHHHHHHH
Confidence 45556678999999999999999999999999999999987654333222211 246788899999998877765
Q ss_pred --cccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|+|||+++..... .. ...+..|+.++.++++++. +.+ ++++|++||...+...+ ..|+.+|
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk 158 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGPGMGAYAAAK 158 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCCCcchhHHHH
Confidence 479999999864221 11 2346788888888888774 345 78999999987765444 6799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.+.+++.. ++++.++||+.++++.... ..+ ......+++++|+|+++..++.++.
T Consensus 159 ~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~------------~~~----~~~~~~~~~~~dva~~~~~~l~~~~ 222 (239)
T PRK12828 159 AGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRA------------DMP----DADFSRWVTPEQIAAVIAFLLSDEA 222 (239)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhh------------cCC----chhhhcCCCHHHHHHHHHHHhCccc
Confidence 9887777543 5899999999998762110 000 0112347899999999999998653
Q ss_pred C-CCCceEEecCCccc
Q 047628 213 T-SMGKIYELGGPDIF 227 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~ 227 (327)
. ..|+.+++.+++.+
T Consensus 223 ~~~~g~~~~~~g~~~~ 238 (239)
T PRK12828 223 QAITGASIPVDGGVAL 238 (239)
T ss_pred ccccceEEEecCCEeC
Confidence 2 25889999887654
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-21 Score=164.45 Aligned_cols=220 Identities=16% Similarity=0.064 Sum_probs=149.2
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+.++.+++|||||+|+||++++++|+++|++|+++.|+.+........... .++.++.+|+++++++.++++
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPG-AKVTATVADVADPAQVERVFDTAVERFG 85 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 345678999999999999999999999999999999986543322221111 146889999999998877664
Q ss_pred cccEEEEccccccccC---------cchhHhhhhHHHHHHHHHHH----HcCCc-ceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 KANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAK----EHGGI-MRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~----~~~~v-~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|+|||++|...... ....+++|+.++.++++++. ..+ . ++++++||.......+ ..|+.+|
T Consensus 86 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~~~~~~y~~~K 164 (264)
T PRK12829 86 GLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGYPGRTPYAASK 164 (264)
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCCCCCchhHHHH
Confidence 5799999998752211 13567889999998888763 333 3 5688888755432222 5799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeee---cCCCceecceeHHHHHHHHHHHh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLF---GDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+.|.+++.. +++++++|||.++|+..... ........ ....... ........+++++|+|.++..++
T Consensus 165 ~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~ 243 (264)
T PRK12829 165 WAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLG-IGLDEMEQEYLEKISLGRMVEPEDIAATALFLA 243 (264)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccC-CChhHHHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 9999887664 58999999999998753211 11000000 0000000 00001235799999999999888
Q ss_pred hcCC-CCCCceEEecCCc
Q 047628 209 KDDG-TSMGKIYELGGPD 225 (327)
Q Consensus 209 ~~~~-~~~~~~~~v~~~~ 225 (327)
.... ...|+.|+++++.
T Consensus 244 ~~~~~~~~g~~~~i~~g~ 261 (264)
T PRK12829 244 SPAARYITGQAISVDGNV 261 (264)
T ss_pred CccccCccCcEEEeCCCc
Confidence 6432 1257899999865
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=3e-21 Score=165.30 Aligned_cols=222 Identities=12% Similarity=0.048 Sum_probs=154.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.++++||||+|+||+++++.|+++|++|++++|+.+.......... .++..+.+|+++++++.++++ .+
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG--PAAIAVSLDVTRQDSIDRIVAAAVERFGGI 81 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 345789999999999999999999999999999998765433222222 357889999999998887765 47
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHcC----CcceEEEEeccCC-CCCC-CchHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEHG----GIMRFIQISCLGA-SSSS-PSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~~----~v~~~v~~Ss~~v-~~~~-~~~y~~~K~~~E 143 (327)
|++||+++..... .....+++|+.++.++++++.... .-.++|++||... .+.. ...|+.+|.+.+
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 161 (257)
T PRK07067 82 DILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVI 161 (257)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHH
Confidence 9999999864321 113467889999999999886431 0147999999643 3222 278999999988
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh---cCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK---FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++++++|+.++++.............. .......+.......+++.+|+|+++..++.....
T Consensus 162 ~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~ 241 (257)
T PRK07067 162 SYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLASADAD 241 (257)
T ss_pred HHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhCcccc
Confidence 887643 48999999999987632211111110000 00011122333445788999999999999986542
Q ss_pred -CCCceEEecCCcccc
Q 047628 214 -SMGKIYELGGPDIFT 228 (327)
Q Consensus 214 -~~~~~~~v~~~~~~s 228 (327)
..|++|++.+++.+|
T Consensus 242 ~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 242 YIVAQTYNVDGGNWMS 257 (257)
T ss_pred cccCcEEeecCCEeCC
Confidence 258999999986553
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.2e-21 Score=165.00 Aligned_cols=215 Identities=18% Similarity=0.151 Sum_probs=150.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
|+++++|||||||++|+++++.|+++|++|++++|+++....... ..+...+++++.+|++|++++.+ ++
T Consensus 1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 345789999999999999999999999999999998765332211 11112368899999999988765 43
Q ss_pred -cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC--CCchHHHhHH
Q 047628 76 -KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS--SPSRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~ 140 (327)
.+|+||||+|...... ....+++|+.++.++++++ ++.+ ..++|++||...... ....|+.+|.
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~ 158 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVSSKY 158 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCCCCchhHHhHH
Confidence 4699999998744211 1235678888888888775 5555 679999999654322 2378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChh--------------HHHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRL--------------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
..|.+++.. +++++++|||.+.++.... .......+... . ......+++++|
T Consensus 159 ~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~d 231 (280)
T PRK06914 159 ALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH--I-----NSGSDTFGNPID 231 (280)
T ss_pred HHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH--H-----hhhhhccCCHHH
Confidence 999887653 5999999999887652110 00111111100 0 011245688999
Q ss_pred HHHHHHHHhhcCCCCCCceEEecCCccccHH
Q 047628 200 VAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230 (327)
Q Consensus 200 ~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~ 230 (327)
+|++++.+++++.. +..|+++++..+++.
T Consensus 232 va~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 232 VANLIVEIAESKRP--KLRYPIGKGVKLMIL 260 (280)
T ss_pred HHHHHHHHHcCCCC--CcccccCCchHHHHH
Confidence 99999999998876 357999876666554
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=159.55 Aligned_cols=221 Identities=15% Similarity=0.065 Sum_probs=158.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------ccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------ANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d~ 79 (327)
+++++||||||+||+++++.|+++|++|++++|+++.......... ..+++.+++|+.+++++.++++. +|+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG-DARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999999999999999999999999998765332222211 13588899999999998877753 799
Q ss_pred EEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC-CCchHHHhHHHHHHHH
Q 047628 80 VINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS-SPSRVFSTKAAAEEAV 146 (327)
Q Consensus 80 vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~-~~~~y~~~K~~~E~~~ 146 (327)
|||++|..... ++ .....+|+.++.++++++. +.+ ..++|++||...... ....|+.+|.+.+.++
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~y~~sK~a~~~~~ 159 (257)
T PRK07074 81 LVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAALGHPAYSAAKAGLIHYT 159 (257)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCCCCcccHHHHHHHHHHH
Confidence 99999864321 11 1234678888888888773 344 568999999644321 2257999999999888
Q ss_pred Hhh-------CCCeEEEecCeeecCCChh----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CC
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDRL----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TS 214 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~ 214 (327)
+.. ++++.+++|+.+.++.... ...+...... .....++++++|++++++.++.... ..
T Consensus 160 ~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~~~~ 230 (257)
T PRK07074 160 KLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK---------WYPLQDFATPDDVANAVLFLASPAARAI 230 (257)
T ss_pred HHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCchhcCc
Confidence 764 4888999999988763211 0111111110 1123578999999999999997532 21
Q ss_pred CCceEEecCCccccHHHHHHHHHH
Q 047628 215 MGKIYELGGPDIFTVHELAELMYD 238 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~el~~~i~~ 238 (327)
.|+.+++.++...+..||.+.+.+
T Consensus 231 ~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 231 TGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred CCcEEEeCCCcCcCChhhhhhhcc
Confidence 578899999999999999987754
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.4e-20 Score=159.50 Aligned_cols=213 Identities=16% Similarity=0.170 Sum_probs=152.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC-CCCeeEEeeCCCChhHHHHHhcc-------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD-LGQIVPMKFNPRDDNTIKATMAK-------A 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~-------~ 77 (327)
.++++|||||+|+||++++++|+++|++|++++|+.++.......... ..++..+.+|+++++++.+++++ +
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 358999999999999999999999999999999986543222221111 13578889999999988877753 6
Q ss_pred cEEEEcccccccc----Cc----chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET----RN----YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~----~~----~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||++|..... .+ ...+.+|+.++.++++++.+. + ..++|++||.......+ ..|+.+|.+.|
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~~sK~a~~ 167 (255)
T PRK07523 89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALARPGIAPYTATKGAVG 167 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCCCCCccHHHHHHHHH
Confidence 9999999874321 11 345678999999999887643 4 56899999976544333 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++.++||+.+.++..... ..+...+... .+ ...+...+|+|++++.++.....
T Consensus 168 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~l~~~~~~ 238 (255)
T PRK07523 168 NLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKR--TP-------AGRWGKVEELVGACVFLASDASS 238 (255)
T ss_pred HHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCchhc
Confidence 887654 58999999999987632111 1111112111 11 12456789999999999975432
Q ss_pred -CCCceEEecCCcccc
Q 047628 214 -SMGKIYELGGPDIFT 228 (327)
Q Consensus 214 -~~~~~~~v~~~~~~s 228 (327)
..|+.+++.++..+|
T Consensus 239 ~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 239 FVNGHVLYVDGGITAS 254 (255)
T ss_pred CccCcEEEECCCeecc
Confidence 258899999876554
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-20 Score=158.43 Aligned_cols=212 Identities=15% Similarity=0.095 Sum_probs=148.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+..+++|||||+|+||++++++|+++|++|++++|++.+............++.++++|+.+++++.++++ .+
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 45689999999999999999999999999999999976543322221112357899999999999987775 46
Q ss_pred cEEEEccccccccC---------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 78 NVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 78 d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
|+|||+++...... ....+++|+.++.++++.+. +.+ .++||++||.......+ ..|+.+|...
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk~~~ 161 (251)
T PRK07231 83 DILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRPGLGWYNASKGAV 161 (251)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCCCchHHHHHHHHH
Confidence 99999998743211 13467788887777776654 345 67999999987765444 6799999998
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChh-HH----HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRL-LN----KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+.. +++++.++||.+..+.... .. ....... .......+++++|+|++++.++..
T Consensus 162 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~~~ 232 (251)
T PRK07231 162 ITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFL---------ATIPLGRLGTPEDIANAALFLASD 232 (251)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHh---------cCCCCCCCcCHHHHHHHHHHHhCc
Confidence 8877653 4889999999886542111 11 1111111 011123568999999999999976
Q ss_pred CCC-CCCceEEecCCcc
Q 047628 211 DGT-SMGKIYELGGPDI 226 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~ 226 (327)
+.. ..|+.+.+.++..
T Consensus 233 ~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 233 EASWITGVTLVVDGGRC 249 (251)
T ss_pred cccCCCCCeEEECCCcc
Confidence 542 1467788877543
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6e-20 Score=157.11 Aligned_cols=213 Identities=15% Similarity=0.068 Sum_probs=148.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-hhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++||||+|+||++++++|+++|++|++++|+..... ....... ...++.++++|+++++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 478999999999999999999999999999998754321 1111111 11368899999999988877664 47
Q ss_pred cEEEEcccccccc----------CcchhHhhhhHHHHHHHHHHHHc----C--C---cceEEEEeccCCCCC--CCchHH
Q 047628 78 NVVINLIGREYET----------RNYSFEDVNHFMAERIAGIAKEH----G--G---IMRFIQISCLGASSS--SPSRVF 136 (327)
Q Consensus 78 d~vi~~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~~~~----~--~---v~~~v~~Ss~~v~~~--~~~~y~ 136 (327)
|+|||++|..... .....+++|+.++.++++++... . . +.++|++||...... ....|+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~ 161 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC 161 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence 9999999864211 11345788999999998887542 1 0 457999999765432 337899
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+|.+.|.+.+.+ ++++++++||.+.++... ....+...... ...+ ...+.+..|+++++..++
T Consensus 162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~d~a~~i~~l~ 233 (256)
T PRK12745 162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAK-GLVP-------MPRWGEPEDVARAVAALA 233 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhh-cCCC-------cCCCcCHHHHHHHHHHHh
Confidence 9999998887654 489999999999876432 12222221111 1111 124668899999999888
Q ss_pred hcCCC-CCCceEEecCCccc
Q 047628 209 KDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~~ 227 (327)
..... ..|+.|++.++...
T Consensus 234 ~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 234 SGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred CCcccccCCCEEEECCCeec
Confidence 65432 15789999887543
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.1e-20 Score=157.76 Aligned_cols=215 Identities=16% Similarity=0.114 Sum_probs=147.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|+||++++++|+++|++|+++.|+.+.............++..+++|++|++++.++++ ++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999999865433222221111357899999999999887765 57
Q ss_pred cEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCC-CC-CCchHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGAS-SS-SPSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~-~~-~~~~y~~~K~~~E 143 (327)
|+|||+++..... +. ...+++|+.++.++.+++ ++.+ .++++++||.... +. ....|+.+|.+.+
T Consensus 83 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~ 161 (252)
T PRK06138 83 DVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGRGRAAYVASKGAIA 161 (252)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCCccHHHHHHHHHH
Confidence 9999999974321 11 234678888887666654 4555 6799999997553 22 2378999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCce-eeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFF-PLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+++.. +++++++||+.+.++... .+... .....+ ...........+++.+|++++++.++.++..
T Consensus 162 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~ 237 (252)
T PRK06138 162 SLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARH----ADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSF 237 (252)
T ss_pred HHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccc----cChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence 887664 589999999999876321 11100 000000 0000001112368899999999999987543
Q ss_pred CCCceEEecCC
Q 047628 214 SMGKIYELGGP 224 (327)
Q Consensus 214 ~~~~~~~v~~~ 224 (327)
..|..+.+.++
T Consensus 238 ~~g~~~~~~~g 248 (252)
T PRK06138 238 ATGTTLVVDGG 248 (252)
T ss_pred ccCCEEEECCC
Confidence 14677877765
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.3e-20 Score=158.96 Aligned_cols=210 Identities=18% Similarity=0.145 Sum_probs=142.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
++++++||||+|+||++++++|+++|++|++++|+.++... +.. .+++++.+|+++++++.++++ ++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id 76 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID 76 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 45799999999999999999999999999999998654322 211 247889999999999887775 579
Q ss_pred EEEEcccccccc--------CcchhHhhhhHH----HHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYET--------RNYSFEDVNHFM----AERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~--------~~~~~~~~n~~~----~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|||++|..... .....+++|+.+ +..+++.+++.+ ..++|++||.+.....| ..|+.+|.+.+.
T Consensus 77 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 155 (273)
T PRK06182 77 VLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTPLGAWYHATKFALEG 155 (273)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCCCccHhHHHHHHHHH
Confidence 999999875321 113456778877 455555666666 67999999976533333 679999999998
Q ss_pred HHHh-------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCce--------eeecCCCceecceeHHHHHHHHHHHhh
Q 047628 145 AVLR-------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF--------PLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 145 ~~~~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+.+. .++++++++||.+..+.................. ..+........+.+.+|+|++++.++.
T Consensus 156 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~~ 235 (273)
T PRK06182 156 FSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAVT 235 (273)
T ss_pred HHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHh
Confidence 7543 3599999999999765321110000000000000 000001112345788999999999988
Q ss_pred cCCCCCCceEEecC
Q 047628 210 DDGTSMGKIYELGG 223 (327)
Q Consensus 210 ~~~~~~~~~~~v~~ 223 (327)
.... ...|+++.
T Consensus 236 ~~~~--~~~~~~g~ 247 (273)
T PRK06182 236 ARRP--KTRYAVGF 247 (273)
T ss_pred CCCC--CceeecCc
Confidence 6543 34677665
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.4e-20 Score=156.57 Aligned_cols=217 Identities=16% Similarity=0.088 Sum_probs=148.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-hhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+.+++||||||+|+||++++++|+++|++|++..|+..... ...... ....++..+.+|+++++++.++++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG 83 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC
Confidence 34589999999999999999999999999988776543211 111111 011356788999999988877664
Q ss_pred cccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 76 KANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
++|+|||++|..... .. ...+++|+.++.++++++...- +..+||++||...+...+ ..|+.+|...|.
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~ 163 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVIN 163 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHH
Confidence 479999999863221 11 2456888999888888887541 124899999987654433 689999999998
Q ss_pred HHHhh------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCce
Q 047628 145 AVLRE------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218 (327)
Q Consensus 145 ~~~~~------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 218 (327)
+.+.+ ++.+.+++|+.+.++.......+..... +... ........+++++|+|++++.++..+.. .|++
T Consensus 164 ~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~~~~dva~~~~~~~~~~~~-~g~~ 238 (252)
T PRK06077 164 LTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSE--KEFA--EKFTLMGKILDPEEVAEFVAAILKIESI-TGQV 238 (252)
T ss_pred HHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccH--HHHH--HhcCcCCCCCCHHHHHHHHHHHhCcccc-CCCe
Confidence 88754 3788999999887553211111000000 0000 0011123679999999999999986655 6889
Q ss_pred EEecCCcc
Q 047628 219 YELGGPDI 226 (327)
Q Consensus 219 ~~v~~~~~ 226 (327)
|++.+++.
T Consensus 239 ~~i~~g~~ 246 (252)
T PRK06077 239 FVLDSGES 246 (252)
T ss_pred EEecCCee
Confidence 99998754
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=155.65 Aligned_cols=210 Identities=19% Similarity=0.169 Sum_probs=145.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
.+++++||||+|+||++++++|+++|++|+++.|+.+.......... ...++.++.+|+++++++.++++ .+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEI 88 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 34689999999999999999999999999999987654322111110 11357888999999998887765 46
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||++|...... ....+++|+.++.++++++. +.+ ..+||++||...+...+ ..|+.+|.+.|
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 167 (274)
T PRK07775 89 EVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRPHMGAYGAAKAGLE 167 (274)
T ss_pred CEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCcchHHHHHHHHH
Confidence 99999998743211 12345789999999988765 333 45899999987665444 67999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecC-CChhHHH-HHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGT-EDRLLNK-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
.+++.. +++++++|||.+..+ +...... ....... ....+ ......+++++|+|++++.+++++.
T Consensus 168 ~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~dva~a~~~~~~~~~-- 241 (274)
T PRK07775 168 AMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLED---WAKWG-QARHDYFLRASDLARAITFVAETPR-- 241 (274)
T ss_pred HHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHH---HHHhc-ccccccccCHHHHHHHHHHHhcCCC--
Confidence 988754 589999999987543 2111111 0000110 00001 1123568999999999999998764
Q ss_pred CCceEEec
Q 047628 215 MGKIYELG 222 (327)
Q Consensus 215 ~~~~~~v~ 222 (327)
.+.+||+.
T Consensus 242 ~~~~~~~~ 249 (274)
T PRK07775 242 GAHVVNME 249 (274)
T ss_pred CCCeeEEe
Confidence 35678875
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.6e-19 Score=153.38 Aligned_cols=215 Identities=16% Similarity=0.089 Sum_probs=149.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh-ccc-CCCCCeeEEeeCCCChhHHHHHhcc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLM-GDLGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
.+++++|||||+|+||++++++|+++|++|+++.|........+ ... ....++.++.+|++|.+++.+++++
T Consensus 7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 34579999999999999999999999999988877543221111 111 1113588899999999988877653
Q ss_pred -ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHcC---CcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 -ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEHG---GIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 -~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~~---~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||+||..... .....+++|+.++.++++++.... .-.++|++||.......| ..|+.+|.++
T Consensus 87 ~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~ 166 (258)
T PRK09134 87 PITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAAL 166 (258)
T ss_pred CCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHH
Confidence 69999999864321 113467889999999999876532 024788888765544444 5799999999
Q ss_pred HHHHHhhC------CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC
Q 047628 143 EEAVLREL------PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG 216 (327)
Q Consensus 143 E~~~~~~~------~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 216 (327)
|.+.+... +.+..++||.+..........+..... . .+. ....+++|+|++++.+++.+.. .|
T Consensus 167 ~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~-~--~~~-------~~~~~~~d~a~~~~~~~~~~~~-~g 235 (258)
T PRK09134 167 WTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDFARQHA-A--TPL-------GRGSTPEEIAAAVRYLLDAPSV-TG 235 (258)
T ss_pred HHHHHHHHHHhcCCcEEEEeecccccCCcccChHHHHHHHh-c--CCC-------CCCcCHHHHHHHHHHHhcCCCc-CC
Confidence 88877642 788999999886543221222222111 1 111 1236689999999999997765 78
Q ss_pred ceEEecCCccccHH
Q 047628 217 KIYELGGPDIFTVH 230 (327)
Q Consensus 217 ~~~~v~~~~~~s~~ 230 (327)
+.|++.++..+++.
T Consensus 236 ~~~~i~gg~~~~~~ 249 (258)
T PRK09134 236 QMIAVDGGQHLAWL 249 (258)
T ss_pred CEEEECCCeecccc
Confidence 89999987766553
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=154.88 Aligned_cols=213 Identities=19% Similarity=0.162 Sum_probs=150.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++++||||+|+||++++++|+++|++|++++|+.+.......... ...++..+.+|+++.+++.++++ .
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 456899999999999999999999999999999998654322111111 11357788999999988876664 4
Q ss_pred ccEEEEccccccc-------c-C---cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCCchHHHhHHH
Q 047628 77 ANVVINLIGREYE-------T-R---NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSPSRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~-------~-~---~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~~~y~~~K~~ 141 (327)
+|+|||++|.... . + ....+++|+.++.++++++... + ..++|++||...+. ..+.|+.+|.+
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-~~~~Y~~sK~a 161 (250)
T PRK07774 84 IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWL-YSNFYGLAKVG 161 (250)
T ss_pred CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccC-CccccHHHHHH
Confidence 7999999997421 0 1 1235678999999999887653 2 45899999987763 34689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+|.+.+.. ++.+++++||.+..+.... ...+.....+. .+. ..+.+++|++++++.++....
T Consensus 162 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~d~a~~~~~~~~~~~ 232 (250)
T PRK07774 162 LNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKG--IPL-------SRMGTPEDLVGMCLFLLSDEA 232 (250)
T ss_pred HHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhChhh
Confidence 99988764 3789999999887654321 11222222221 111 123567999999999887643
Q ss_pred C-CCCceEEecCCcccc
Q 047628 213 T-SMGKIYELGGPDIFT 228 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~s 228 (327)
. ..|++|++.+++.++
T Consensus 233 ~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 233 SWITGQIFNVDGGQIIR 249 (250)
T ss_pred hCcCCCEEEECCCeecc
Confidence 1 257899999987653
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.5e-19 Score=150.78 Aligned_cols=211 Identities=16% Similarity=0.127 Sum_probs=146.1
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh-ccc-CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLM-GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
.+.+++++||||||++|+++++.|+++|++|+++.|+........ ... ....++..+.+|+++++++.++++
T Consensus 2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF 81 (248)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 345679999999999999999999999999999888765321111 111 112467888999999998887765
Q ss_pred -cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCC--CCchHHHhHH
Q 047628 76 -KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSS--SPSRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~--~~~~y~~~K~ 140 (327)
++|+|||+++...... ....+.+|+.++.++++++... + .++||++||...... ....|+.+|.
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~~~~~y~~sk~ 160 (248)
T PRK05557 82 GGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNPGQANYAASKA 160 (248)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCCCCchhHHHHH
Confidence 4799999998743211 1235668888888888887643 4 568999999644322 2378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc--
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD-- 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~-- 210 (327)
+.|.+++.. ++++++++|+.+.++... ....+........ + ...+.+.+|++.++..++..
T Consensus 161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~va~~~~~l~~~~~ 231 (248)
T PRK05557 161 GVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQI--P-------LGRLGQPEEIASAVAFLASDEA 231 (248)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcC--C-------CCCCcCHHHHHHHHHHHcCccc
Confidence 988776543 489999999988644221 1222222222111 1 12356889999999988865
Q ss_pred CCCCCCceEEecCCc
Q 047628 211 DGTSMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~~~~~~~~v~~~~ 225 (327)
... .|+.|++.++.
T Consensus 232 ~~~-~g~~~~i~~~~ 245 (248)
T PRK05557 232 AYI-TGQTLHVNGGM 245 (248)
T ss_pred CCc-cccEEEecCCc
Confidence 233 67899998753
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.5e-20 Score=155.72 Aligned_cols=211 Identities=18% Similarity=0.114 Sum_probs=146.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+++++++||||+|+||++++++|+++|++|.++ .|+.++......... ...++.++.+|++|++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence 345899999999999999999999999999775 565433222222111 11357889999999999887765
Q ss_pred ------cccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 ------KANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 ------~~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
++|+|||++|...... + ...+++|+.++.++++++...- ...++|++||..+....+ ..|+.+
T Consensus 84 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~s 163 (254)
T PRK12746 84 IRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLS 163 (254)
T ss_pred cccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhh
Confidence 4799999998743211 1 2355689999999999887631 134899999987654333 679999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
|.+.|.+.+.. ++++++++|+.+.++-.... ..+....... .....+++++|+|+++..++
T Consensus 164 K~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~ 234 (254)
T PRK12746 164 KGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNS---------SVFGRIGQVEDIADAVAFLA 234 (254)
T ss_pred HHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhc---------CCcCCCCCHHHHHHHHHHHc
Confidence 99998876443 48899999999886632111 1111111111 11234668999999999888
Q ss_pred hcCCC-CCCceEEecCC
Q 047628 209 KDDGT-SMGKIYELGGP 224 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~ 224 (327)
.++.. ..|++|++.++
T Consensus 235 ~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 235 SSDSRWVTGQIIDVSGG 251 (254)
T ss_pred CcccCCcCCCEEEeCCC
Confidence 76532 15789999875
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=152.34 Aligned_cols=198 Identities=15% Similarity=0.042 Sum_probs=138.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---cccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---KANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~vi~ 82 (327)
++|+++||||+|+||+++++.|+++ ++|++++|+.+......+.. ++++++++|+.+++++.++++ ++|+|||
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~ 77 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL---PGATPFPVDLTDPEAIAAAVEQLGRLDVLVH 77 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh---ccceEEecCCCCHHHHHHHHHhcCCCCEEEE
Confidence 3578999999999999999999999 99999999865432211111 357889999999999998886 4899999
Q ss_pred ccccccccC-----c---chhHhhhhHH----HHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHh
Q 047628 83 LIGREYETR-----N---YSFEDVNHFM----AERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 83 ~a~~~~~~~-----~---~~~~~~n~~~----~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~ 148 (327)
++|...... + ...+.+|+.+ +.++++++++.+ .++|++||...+...+ ..|+.+|...|.+++.
T Consensus 78 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~ 155 (227)
T PRK08219 78 NAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRANPGWGSYAASKFALRALADA 155 (227)
T ss_pred CCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHH
Confidence 998743211 1 1235667766 455555555554 6899999876654333 7899999999887665
Q ss_pred h-----C-CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEec
Q 047628 149 E-----L-PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222 (327)
Q Consensus 149 ~-----~-~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~ 222 (327)
. . +++..++|+.+.++.. ..+.. .... ......+++.+|+|++++.+++.+.. +.+|++.
T Consensus 156 ~~~~~~~~i~~~~i~pg~~~~~~~---~~~~~----~~~~-----~~~~~~~~~~~dva~~~~~~l~~~~~--~~~~~~~ 221 (227)
T PRK08219 156 LREEEPGNVRVTSVHPGRTDTDMQ---RGLVA----QEGG-----EYDPERYLRPETVAKAVRFAVDAPPD--AHITEVV 221 (227)
T ss_pred HHHHhcCCceEEEEecCCccchHh---hhhhh----hhcc-----ccCCCCCCCHHHHHHHHHHHHcCCCC--CccceEE
Confidence 3 3 7888888887653311 11111 1001 11124679999999999999987653 6677765
Q ss_pred C
Q 047628 223 G 223 (327)
Q Consensus 223 ~ 223 (327)
-
T Consensus 222 ~ 222 (227)
T PRK08219 222 V 222 (227)
T ss_pred E
Confidence 3
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-20 Score=148.64 Aligned_cols=296 Identities=15% Similarity=0.116 Sum_probs=190.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCC------CCCeeEEeeCCCChhHHHHHhcc--cc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGD------LGQIVPMKFNPRDDNTIKATMAK--AN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~------~~~v~~~~~Dl~~~~~~~~~~~~--~d 78 (327)
+..||||-||.=|+.|++.|+..||+|.++.|+.+.- ...+..+.. ........+|++|...+.+++.. .+
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 5689999999999999999999999999999987652 223332221 14577889999999999999875 58
Q ss_pred EEEEcccccccc----CcchhHhhhhHHHHHHHHHHHHcCCcc---eEEEEeccCCCC---------CCC----chHHHh
Q 047628 79 VVINLIGREYET----RNYSFEDVNHFMAERIAGIAKEHGGIM---RFIQISCLGASS---------SSP----SRVFST 138 (327)
Q Consensus 79 ~vi~~a~~~~~~----~~~~~~~~n~~~~~~l~~a~~~~~~v~---~~v~~Ss~~v~~---------~~~----~~y~~~ 138 (327)
-|+|+|++++.. -++..-++...|+.+|++|.+.++ +. +|...||...++ ..| ++|+.+
T Consensus 109 EiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~-l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~a 187 (376)
T KOG1372|consen 109 EVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR-LTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAA 187 (376)
T ss_pred hhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC-cccceeEEecccHhhcccccCCCcccCCCCCCCChhHHh
Confidence 999999987643 234455677889999999999886 32 788888864432 122 789888
Q ss_pred HHHHHHHHHhhCCCeEEEe-cCeeecC-----CChhHHHHH-HH----HhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 139 KAAAEEAVLRELPWATIMR-PAAMIGT-----EDRLLNKWA-QF----VKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 139 K~~~E~~~~~~~~~~~i~r-~~~~~G~-----~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|...--++-.+.-.+..+. -|+.|-- +.+++.+-+ +. ..........|+-+..++|-|..|.+++++.+
T Consensus 188 Kmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVEAMW~m 267 (376)
T KOG1372|consen 188 KMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVEAMWLM 267 (376)
T ss_pred hhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHHHHHHH
Confidence 8765433222211122222 2344421 234443322 11 12222334447888999999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
|.++.+ .-|.|..++..|++|+.+.--...|..+...-....... .-..... .... .|+- +.+..+
T Consensus 268 LQ~d~P---dDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~---~n~~g~v-~V~v-~~kY--yRPtEV---- 333 (376)
T KOG1372|consen 268 LQQDSP---DDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVG---KNDDGVV-RVKV-DPKY--YRPTEV---- 333 (376)
T ss_pred HhcCCC---CceEEecCCcccHHHHHHHHHHhhCcEEeeccccccccc---ccCCceE-EEEe-cccc--cCcchh----
Confidence 998876 579998889999999999877777643322210000000 0000000 0000 0000 112223
Q ss_pred cCcccCCCcccccccCCccc-cccCccHHHHHH
Q 047628 288 SDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIW 319 (327)
Q Consensus 288 ~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~ 319 (327)
++...+.+|+++.|||+|+ .+.+.+++++..
T Consensus 334 -d~LqGdasKAk~~LgW~pkv~f~eLVkeMv~~ 365 (376)
T KOG1372|consen 334 -DTLQGDASKAKKTLGWKPKVTFPELVKEMVAS 365 (376)
T ss_pred -hhhcCChHHHHHhhCCCCccCHHHHHHHHHHh
Confidence 3444556799999999998 999888887654
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=153.54 Aligned_cols=212 Identities=19% Similarity=0.134 Sum_probs=150.5
Q ss_pred CCcc--cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--
Q 047628 1 MTYV--YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-- 76 (327)
Q Consensus 1 ~~~~--~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-- 76 (327)
|++. +++++++||||+|+||+++++.|+++|++|++++|+.++....... .++.++.+|+++.+++.++++.
T Consensus 1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~ 76 (245)
T PRK07060 1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE----TGCEPLRLDVGDDAAIRAALAAAG 76 (245)
T ss_pred CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hCCeEEEecCCCHHHHHHHHHHhC
Confidence 4544 4457999999999999999999999999999999986543222121 1367789999999988887763
Q ss_pred -ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCC--CCchHHHhHHH
Q 047628 77 -ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSS--SPSRVFSTKAA 141 (327)
Q Consensus 77 -~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~ 141 (327)
+|+|||+++...... ....+.+|+.++.++++++.+. +...+||++||...+.. ....|+.+|.+
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a 156 (245)
T PRK07060 77 AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAA 156 (245)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHH
Confidence 799999998743211 1235568999999999887653 11258999999765433 23789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChh-HH--HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRL-LN--KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+|.+++.. +++++.+||+.+.++.... +. ........ ......+++++|+|++++.++..+
T Consensus 157 ~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~ 227 (245)
T PRK07060 157 LDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLA---------AIPLGRFAEVDDVAAPILFLLSDA 227 (245)
T ss_pred HHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCcc
Confidence 99987654 4899999999998764211 10 01111110 011235789999999999999865
Q ss_pred CC-CCCceEEecCCc
Q 047628 212 GT-SMGKIYELGGPD 225 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~ 225 (327)
.. ..|+.+++.++.
T Consensus 228 ~~~~~G~~~~~~~g~ 242 (245)
T PRK07060 228 ASMVSGVSLPVDGGY 242 (245)
T ss_pred cCCccCcEEeECCCc
Confidence 43 158888888753
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.4e-19 Score=154.31 Aligned_cols=210 Identities=20% Similarity=0.131 Sum_probs=146.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEE-eeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLV-PFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~-~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
.+++++||||+|+||+++++.|+++|++|++ ..|+.+..... ++..+ .++.++.+|+++++++.++++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALG--RKALAVKANVGDVEKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4579999999999999999999999999876 46665432221 11112 357889999999998887775
Q ss_pred -cccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHH
Q 047628 76 -KANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~ 140 (327)
.+|+|||++|...... + ...+++|+.++.++++++.. .+ .++||++||....... ...|+.+|.
T Consensus 81 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK~ 159 (250)
T PRK08063 81 GRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVGVSKA 159 (250)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCccHHHHHHH
Confidence 3799999998643211 1 12457888888888887764 33 4699999997654332 278999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
++|.+++.. ++++++++|+.+..+..... ..+...... ..+ ...+++.+|+|++++.++.+
T Consensus 160 a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~dva~~~~~~~~~ 230 (250)
T PRK08063 160 ALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARA--KTP-------AGRMVEPEDVANAVLFLCSP 230 (250)
T ss_pred HHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhc--CCC-------CCCCcCHHHHHHHHHHHcCc
Confidence 999998753 48999999998875431111 111111111 011 12468899999999999976
Q ss_pred CCC-CCCceEEecCCccc
Q 047628 211 DGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~ 227 (327)
+.. ..|+.+++.++..+
T Consensus 231 ~~~~~~g~~~~~~gg~~~ 248 (250)
T PRK08063 231 EADMIRGQTIIVDGGRSL 248 (250)
T ss_pred hhcCccCCEEEECCCeee
Confidence 542 15889999887643
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.5e-19 Score=153.79 Aligned_cols=229 Identities=10% Similarity=0.008 Sum_probs=151.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
+++++++||||+|+||+++++.|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 456789999999999999999999999999999998655332222211 113578889999999988877653
Q ss_pred ccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||+||..... +. ...+++|+.++.++++++. +.+...++|++||.......+ ..|+.+|.++
T Consensus 84 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 163 (275)
T PRK05876 84 VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGV 163 (275)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHH
Confidence 69999999974321 11 2456889999998888864 332125899999976654333 7899999974
Q ss_pred HHH----HHhh---CCCeEEEecCeeecCCChhHHHHHH-HHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 143 EEA----VLRE---LPWATIMRPAAMIGTEDRLLNKWAQ-FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 143 E~~----~~~~---~~~~~i~r~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
+.+ ..++ ++++++++|+.+.++.......... ..........++......++++++|+|+.++.++.++
T Consensus 164 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~~--- 240 (275)
T PRK05876 164 VGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN--- 240 (275)
T ss_pred HHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHcC---
Confidence 444 3333 5999999999887653211111000 0000111122233334567899999999999999754
Q ss_pred CCceEEecCCccccHHHHHHHHHHHh
Q 047628 215 MGKIYELGGPDIFTVHELAELMYDTI 240 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~el~~~i~~~~ 240 (327)
+.|.+.++ ....++.+...+..
T Consensus 241 --~~~~~~~~--~~~~~~~~~~~~~~ 262 (275)
T PRK05876 241 --RLYVLPHA--ASRASIRRRFERID 262 (275)
T ss_pred --CeEEecCh--hhHHHHHHHHHHHH
Confidence 35556543 34455554444443
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.5e-19 Score=155.96 Aligned_cols=213 Identities=13% Similarity=0.098 Sum_probs=146.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
+.++++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.+++++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~ 83 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGA 83 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 445789999999999999999999999999999997654332222111 113578899999999999887763
Q ss_pred ccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHH----HHHcCCc------ceEEEEeccCCCCCCC--chHH
Q 047628 77 ANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGI----AKEHGGI------MRFIQISCLGASSSSP--SRVF 136 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a----~~~~~~v------~~~v~~Ss~~v~~~~~--~~y~ 136 (327)
+|+|||+||..... +. ...+++|+.++.+++++ +.+.+ . .++|++||.......+ ..|+
T Consensus 84 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~ 162 (287)
T PRK06194 84 VHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAA-EKDPAYEGHIVNTASMAGLLAPPAMGIYN 162 (287)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCCCCCCeEEEEeCChhhccCCCCCcchH
Confidence 69999999985431 11 23577899988887776 44444 2 4899999976654333 6799
Q ss_pred HhHHHHHHHHHhhC---------CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 137 STKAAAEEAVLREL---------PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 137 ~~K~~~E~~~~~~~---------~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
.+|.+.|.+.+.+. +++..+.|+.+..+ +. .....++..+.+++.+.+++++++|.+..+...
T Consensus 163 ~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~----~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T PRK06194 163 VSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG----IW----QSERNRPADLANTAPPTRSQLIAQAMSQKAVGS 234 (287)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc----cc----cccccCchhcccCccccchhhHHHHHHHhhhhc
Confidence 99999998886542 44556666555321 11 111123455556667777888888877654311
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcC
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREY 243 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~ 243 (327)
+ .++..|+++.+.+..+..
T Consensus 235 --------~---------~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 235 --------G---------KVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred --------c---------CCCHHHHHHHHHHHHHcC
Confidence 1 168888888888876543
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5e-19 Score=150.60 Aligned_cols=211 Identities=13% Similarity=0.104 Sum_probs=147.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh-ccc-CCCCCeeEEeeCCCChhHHHHHhcc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLM-GDLGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
+.+++++||||+|+||++++++|+++|++|+++.+......... ... ....++.++.+|+++++++.++++.
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34689999999999999999999999999987655432221111 111 1113588899999999998887764
Q ss_pred -ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC--CCchHHHhHHH
Q 047628 77 -ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS--SPSRVFSTKAA 141 (327)
Q Consensus 77 -~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~ 141 (327)
+|+|||+++..... .....+++|+.++.++++++.. .+ ..++|++||...... ....|+.+|.+
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a 162 (247)
T PRK12935 84 KVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTNYSAAKAG 162 (247)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence 69999999874321 1235678899999999998864 33 458999999754322 22789999998
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHH-HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.+.. ++++++++|+.+.++...... ........ ......+.+++|++++++.+++....
T Consensus 163 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~edva~~~~~~~~~~~~ 233 (247)
T PRK12935 163 MLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVA---------KIPKKRFGQADEIAKGVVYLCRDGAY 233 (247)
T ss_pred HHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHH---------hCCCCCCcCHHHHHHHHHHHcCcccC
Confidence 88776543 589999999988754211111 11111110 11224678999999999999976542
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..|+.|++.++.
T Consensus 234 ~~g~~~~i~~g~ 245 (247)
T PRK12935 234 ITGQQLNINGGL 245 (247)
T ss_pred ccCCEEEeCCCc
Confidence 268999999863
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.7e-19 Score=154.63 Aligned_cols=220 Identities=15% Similarity=0.060 Sum_probs=147.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc---cCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---MGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++|+||||+|+||+++++.|+++|++|++++|+.......... .....++.++.+|+++++++..+++ .
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999986543222111 1111358899999999988876664 4
Q ss_pred ccEEEEcccccccc----Cc----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCC-CCC-CCchHHHhHHHH
Q 047628 77 ANVVINLIGREYET----RN----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGA-SSS-SPSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~----~~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v-~~~-~~~~y~~~K~~~ 142 (327)
+|+|||++|..... .+ ...+++|+.++.++++++.. .+.-.++|++||... .+. ....|+.+|.+.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~ 161 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGG 161 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHH
Confidence 69999999864321 11 24567889888877776643 330148999988643 322 226899999998
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCC--hhHHHHHHHHh--hcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTED--RLLNKWAQFVK--KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+.+.+.. ++++.++|||.++++.. ..++.+..... .........+......+++.+|++++++.++...
T Consensus 162 ~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~~ 241 (259)
T PRK12384 162 VGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASPK 241 (259)
T ss_pred HHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCcc
Confidence 7776543 49999999998886532 12222211100 0000111122333456789999999999888754
Q ss_pred CC-CCCceEEecCCcc
Q 047628 212 GT-SMGKIYELGGPDI 226 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~~ 226 (327)
.. ..|++|++.+++.
T Consensus 242 ~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 242 ASYCTGQSINVTGGQV 257 (259)
T ss_pred cccccCceEEEcCCEE
Confidence 32 2588999998764
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=6e-19 Score=152.96 Aligned_cols=221 Identities=15% Similarity=0.067 Sum_probs=150.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|+||++++++|+++|++|++++|+.+.............++.++++|++|++++.++++ .+
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 34578999999999999999999999999999998765432222222222468899999999999888775 58
Q ss_pred cEEEEcccccccc----------CcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCC-C-CCCchHHHhHHH
Q 047628 78 NVVINLIGREYET----------RNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGAS-S-SSPSRVFSTKAA 141 (327)
Q Consensus 78 d~vi~~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~-~-~~~~~y~~~K~~ 141 (327)
|+|||+||..... .....+++|+.++.++++++... + -.++|++||.... . ..+..|+.+|.+
T Consensus 96 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~Y~~sK~a 174 (280)
T PLN02253 96 DIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGGLGPHAYTGSKHA 174 (280)
T ss_pred CEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccCCCCcccHHHHHH
Confidence 9999999874321 11357889999999988877542 2 2478888886542 2 234689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCCh-hH------HHHHHHHhhcCceeeecCCC-ceecceeHHHHHHHHHH
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDR-LL------NKWAQFVKKFNFFPLFGDGS-TRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~------~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~ 206 (327)
.|.+.+.. ++.+.+++|+.+..+... .. ........ ....... .....++.+|+|++++.
T Consensus 175 ~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~~~~~dva~~~~~ 249 (280)
T PLN02253 175 VLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFR-----AFAGKNANLKGVELTVDDVANAVLF 249 (280)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhH-----HHhhcCCCCcCCCCCHHHHHHHHHh
Confidence 99988764 488899999988754210 00 00000000 0000000 01224679999999999
Q ss_pred HhhcCCC-CCCceEEecCCccccHHH
Q 047628 207 ALKDDGT-SMGKIYELGGPDIFTVHE 231 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~~~s~~e 231 (327)
++..... ..|+.+++.++...+..+
T Consensus 250 l~s~~~~~i~G~~i~vdgG~~~~~~~ 275 (280)
T PLN02253 250 LASDEARYISGLNLMIDGGFTCTNHS 275 (280)
T ss_pred hcCcccccccCcEEEECCchhhccch
Confidence 9875432 257889998875544433
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.83 E-value=3e-19 Score=152.19 Aligned_cols=210 Identities=17% Similarity=0.110 Sum_probs=147.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
.++++|||||+|+||++++++|++.|++|++++|+.+.......... ...++.++.+|+++++++.++++ ++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45789999999999999999999999999999998654322211110 11358899999999998887765 47
Q ss_pred cEEEEccccccc-----cCc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYE-----TRN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~-----~~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+++.... .+. ...+++|+.++.++++++. +.+ ..++|++||...+...+ ..|+.+|.+.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~ 160 (250)
T TIGR03206 82 DVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEAVYAACKGGLV 160 (250)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCCCchHHHHHHHHH
Confidence 999999986321 111 2457889999998888765 445 67999999987654333 78999998887
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH-------HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL-------NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.+.+ ++++++++|+.++++....+ ..+....... .+ ...+...+|+|+++..++.
T Consensus 161 ~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~l~~ 231 (250)
T TIGR03206 161 AFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRA--IP-------LGRLGQPDDLPGAILFFSS 231 (250)
T ss_pred HHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhc--CC-------ccCCcCHHHHHHHHHHHcC
Confidence 776643 59999999999986521110 0011111111 11 1124567999999999887
Q ss_pred cCCC-CCCceEEecCCc
Q 047628 210 DDGT-SMGKIYELGGPD 225 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~ 225 (327)
.... ..|+++++.++.
T Consensus 232 ~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 232 DDASFITGQVLSVSGGL 248 (250)
T ss_pred cccCCCcCcEEEeCCCc
Confidence 6542 258899998753
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=6.2e-19 Score=150.13 Aligned_cols=210 Identities=17% Similarity=0.111 Sum_probs=147.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc----c-CCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL----M-GDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~----~-~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
+++|+++||||+|+||+++++.|+++|++|+++.|...+....... . ....++.++.+|+.+++++.++++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 4468999999999999999999999999999988754332222111 1 011368899999999998887764
Q ss_pred ---cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHH-----HcCCcceEEEEeccCCCCC--CCchHHH
Q 047628 76 ---KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAK-----EHGGIMRFIQISCLGASSS--SPSRVFS 137 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~-----~~~~v~~~v~~Ss~~v~~~--~~~~y~~ 137 (327)
++|+|||++|..... + ....+++|+.++.++++++. +.+ ..++|++||...... ....|+.
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~ 162 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNRGQVNYAA 162 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCCCCchhHH
Confidence 479999999875421 1 13456889999999999987 444 678999999766432 2378999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+|.+.+.+++.. +++++++|||.+.++........ ....+. .+ ...+.+.+|+++++..++..
T Consensus 163 sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~-~~~~~~--~~-------~~~~~~~~~va~~~~~l~~~ 232 (249)
T PRK12827 163 SKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT-EHLLNP--VP-------VQRLGEPDEVAALVAFLVSD 232 (249)
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH-HHHHhh--CC-------CcCCcCHHHHHHHHHHHcCc
Confidence 999888776543 59999999999987643211100 111111 11 11235779999999988865
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
... ..|+.+++.++.
T Consensus 233 ~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 233 AASYVTGQVIPVDGGF 248 (249)
T ss_pred ccCCccCcEEEeCCCC
Confidence 432 147888888753
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.5e-19 Score=149.34 Aligned_cols=214 Identities=15% Similarity=0.008 Sum_probs=148.1
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-----
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK----- 76 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----- 76 (327)
.+.+..+++|||||+|+||++++++|+++|++|+++.|+.. ...+ .++..+++|+++++++.+++++
T Consensus 3 ~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~------~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (252)
T PRK08220 3 AMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL------TQED--YPFATFVLDVSDAAAVAQVCQRLLAET 74 (252)
T ss_pred ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh------hhcC--CceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 34456689999999999999999999999999999999761 1111 3588899999999999887754
Q ss_pred --ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHH
Q 047628 77 --ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKA 140 (327)
Q Consensus 77 --~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~ 140 (327)
+|+|||+++..... .....+++|+.++..+++++.. .+ ..++|++||....... ...|+.+|.
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~~~~~Y~~sK~ 153 (252)
T PRK08220 75 GPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRIGMAAYGASKA 153 (252)
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCCCCchhHHHHH
Confidence 69999999874321 1134678899998888888753 33 4589999997654332 278999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHH---HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLN---KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
..|.+.+.. ++++.+++|+.+.++....+. ........+ .............+++++|+|++++.++..
T Consensus 154 a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 232 (252)
T PRK08220 154 ALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAG-FPEQFKLGIPLGKIARPQEIANAVLFLASD 232 (252)
T ss_pred HHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhh-HHHHHhhcCCCcccCCHHHHHHHHHHHhcc
Confidence 998887543 488999999999876421110 000000000 000000111124578899999999998875
Q ss_pred CC-CCCCceEEecCCc
Q 047628 211 DG-TSMGKIYELGGPD 225 (327)
Q Consensus 211 ~~-~~~~~~~~v~~~~ 225 (327)
.. ...|+...+.++.
T Consensus 233 ~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 233 LASHITLQDIVVDGGA 248 (252)
T ss_pred hhcCccCcEEEECCCe
Confidence 43 2257777777754
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=154.51 Aligned_cols=222 Identities=15% Similarity=0.076 Sum_probs=149.1
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
.++.++++||||+|+||++++++|+++|++|++++|+++.......... ...++..+.+|+++++++..+++
T Consensus 2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 3556899999999999999999999999999999998754322222111 11357889999999998877664
Q ss_pred cccEEEEccccccc------c---CcchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 76 KANVVINLIGREYE------T---RNYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 76 ~~d~vi~~a~~~~~------~---~~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
.+|+|||++|.... . .....+++|+.++..+++++...- ...++|++||.......+ ..|+.+|...
T Consensus 82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~ 161 (258)
T PRK07890 82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGAL 161 (258)
T ss_pred CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHH
Confidence 46999999986422 1 113467889999999999886531 024899999976654333 6899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHH--hhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFV--KKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+++.. ++++.+++||.++++... .+....... .........-.......+.+++|++++++.++....
T Consensus 162 ~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~ 241 (258)
T PRK07890 162 LAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLA 241 (258)
T ss_pred HHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhh
Confidence 9888754 489999999999987421 111000000 000000000000111246788999999999887532
Q ss_pred -CCCCceEEecCCc
Q 047628 213 -TSMGKIYELGGPD 225 (327)
Q Consensus 213 -~~~~~~~~v~~~~ 225 (327)
...|+.+.+.++.
T Consensus 242 ~~~~G~~i~~~gg~ 255 (258)
T PRK07890 242 RAITGQTLDVNCGE 255 (258)
T ss_pred hCccCcEEEeCCcc
Confidence 1257777777654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=148.84 Aligned_cols=213 Identities=17% Similarity=0.099 Sum_probs=149.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
.+.+++++||||+|.||+++++.|+++|++|++++|++++........ ....++.++.+|+++++++.++++
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALG 83 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 355689999999999999999999999999999998865432222111 111368899999999998887764
Q ss_pred cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHcC---CcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 76 KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEHG---GIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~~---~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
++|+|||++|..... + ....++.|+.++.++++++...- +..++|++||.......+ ..|+.+|...
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~ 163 (250)
T PRK12939 84 GLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAV 163 (250)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHH
Confidence 479999999874321 1 12346789999988988875431 034899999976543333 6799999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHH--HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLN--KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
|.+.+.. ++.+.+++||.+..+...... .+...... ......+++.+|+|++++.++..+..
T Consensus 164 ~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~~ 234 (250)
T PRK12939 164 IGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLK---------GRALERLQVPDDVAGAVLFLLSDAAR 234 (250)
T ss_pred HHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCcccc
Confidence 9988753 488899999988655321111 11111111 11224568899999999999986432
Q ss_pred -CCCceEEecCCc
Q 047628 214 -SMGKIYELGGPD 225 (327)
Q Consensus 214 -~~~~~~~v~~~~ 225 (327)
..|+.+.+.++.
T Consensus 235 ~~~G~~i~~~gg~ 247 (250)
T PRK12939 235 FVTGQLLPVNGGF 247 (250)
T ss_pred CccCcEEEECCCc
Confidence 268889988864
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-18 Score=148.99 Aligned_cols=210 Identities=15% Similarity=0.123 Sum_probs=146.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+..+++|||||+|+||+++++.|+++|++|++++|+.++......... ...++.++.+|++|++++.++++ .
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 345899999999999999999999999999999998654322221111 11357789999999998876654 4
Q ss_pred ccEEEEcccccccc----Cc----chhHhhhhHHHHHHHHHHHHc-----CCcceEEEEeccCCCC-CCC-----chHHH
Q 047628 77 ANVVINLIGREYET----RN----YSFEDVNHFMAERIAGIAKEH-----GGIMRFIQISCLGASS-SSP-----SRVFS 137 (327)
Q Consensus 77 ~d~vi~~a~~~~~~----~~----~~~~~~n~~~~~~l~~a~~~~-----~~v~~~v~~Ss~~v~~-~~~-----~~y~~ 137 (327)
+|+|||++|..... .+ ...+++|+.++.++++++... + ..+||++||..... ..+ ..|..
T Consensus 90 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~~~~Y~~ 168 (259)
T PRK08213 90 VDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTIAYNT 168 (259)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccCcchHHH
Confidence 79999999864221 11 235678999999999987654 4 57999999965432 221 68999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|..+|.+++.+ ++.+.+++|+.+-.+.. ..++.+........+.. .+...+|++..+..++.
T Consensus 169 sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~va~~~~~l~~ 239 (259)
T PRK08213 169 SKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLG---------RLGDDEDLKGAALLLAS 239 (259)
T ss_pred HHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhC
Confidence 999999988764 48889999998865432 23333333332222221 23456999999988886
Q ss_pred cCCC-CCCceEEecCC
Q 047628 210 DDGT-SMGKIYELGGP 224 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~ 224 (327)
.... ..|+.+++.++
T Consensus 240 ~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 240 DASKHITGQILAVDGG 255 (259)
T ss_pred ccccCccCCEEEECCC
Confidence 5432 25788888875
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.4e-19 Score=150.01 Aligned_cols=207 Identities=14% Similarity=0.116 Sum_probs=140.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC---CCCCeeEEeeCCCChhHHHHHhcc------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG---DLGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
++++++||||+|+||+++++.|+++|++|+++.|++++......... ....+.++.+|++|++++.++++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999998765432222111 112466779999999998877753
Q ss_pred -ccEEEEcccccccc--------C---cchhHhhhhHHHHHH----HHHHHHcCCcceEEEEeccCCCCC----------
Q 047628 77 -ANVVINLIGREYET--------R---NYSFEDVNHFMAERI----AGIAKEHGGIMRFIQISCLGASSS---------- 130 (327)
Q Consensus 77 -~d~vi~~a~~~~~~--------~---~~~~~~~n~~~~~~l----~~a~~~~~~v~~~v~~Ss~~v~~~---------- 130 (327)
+|+|||+|+..... + -...+++|+.++..+ ++++++.+ ..++|++||......
T Consensus 83 ~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~ 161 (256)
T PRK09186 83 KIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGTS 161 (256)
T ss_pred CccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhccccc
Confidence 79999999753210 0 123456676555544 44455556 679999999643211
Q ss_pred --CCchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHH
Q 047628 131 --SPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201 (327)
Q Consensus 131 --~~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 201 (327)
.+..|+.+|...+.+.+.. ++++++++|+.++++.... +....... .+ ...+++.+|+|
T Consensus 162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~---~~~~~~~~--~~-------~~~~~~~~dva 229 (256)
T PRK09186 162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEA---FLNAYKKC--CN-------GKGMLDPDDIC 229 (256)
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHH---HHHHHHhc--CC-------ccCCCCHHHhh
Confidence 1246999999998887532 4889999999887543221 11111111 11 13468999999
Q ss_pred HHHHHHhhcCCC-CCCceEEecCCc
Q 047628 202 AAVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 202 ~~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
++++.++.+... ..|+.+.+.++.
T Consensus 230 ~~~~~l~~~~~~~~~g~~~~~~~g~ 254 (256)
T PRK09186 230 GTLVFLLSDQSKYITGQNIIVDDGF 254 (256)
T ss_pred hhHhheeccccccccCceEEecCCc
Confidence 999999976542 147777777753
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-19 Score=150.78 Aligned_cols=215 Identities=14% Similarity=0.101 Sum_probs=150.4
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
|.++++.+++|||||+|.||++++++|+++|++|++++|+++.. ....... ...++.++.+|+++++++.++++
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 55667778999999999999999999999999999999987653 2211110 11468899999999998887775
Q ss_pred ---cccEEEEccccccccC-------cchhHhhhhHHHHHHHHHHHH---cCCcceEEEEeccCCCCCC--CchHHHhHH
Q 047628 76 ---KANVVINLIGREYETR-------NYSFEDVNHFMAERIAGIAKE---HGGIMRFIQISCLGASSSS--PSRVFSTKA 140 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~-------~~~~~~~n~~~~~~l~~a~~~---~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~ 140 (327)
.+|+|||++|...... -...+++|+.++.++.+++.. .+ ..+||++||....... ...|+.+|.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~ 158 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTALTGQGGTSGYAAAKG 158 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHhccCCCCCchhHHHHH
Confidence 4799999998632211 123567788888888887653 22 3589999997654332 278999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHH------HHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWA------QFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
..|.+.+.. ++++..++||.++++... ++..+. ..+. ...+. + ..++..+|+|++++.
T Consensus 159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~---~---~~~~~~~dva~~~~~ 230 (258)
T PRK08628 159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAIT--AKIPL---G---HRMTTAEEIADTAVF 230 (258)
T ss_pred HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHH--hcCCc---c---ccCCCHHHHHHHHHH
Confidence 999988754 489999999999876321 111000 0000 00111 0 246788999999999
Q ss_pred HhhcCCC-CCCceEEecCCc
Q 047628 207 ALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~ 225 (327)
++..... ..|+.+.+.++.
T Consensus 231 l~~~~~~~~~g~~~~~~gg~ 250 (258)
T PRK08628 231 LLSERSSHTTGQWLFVDGGY 250 (258)
T ss_pred HhChhhccccCceEEecCCc
Confidence 9976532 257788887653
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-18 Score=148.50 Aligned_cols=201 Identities=19% Similarity=0.164 Sum_probs=141.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------ccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------ANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d~ 79 (327)
+++++||||||+||++++++|+++|++|++++|+.+..... .+++++++|++|++++.+++++ +|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~ 76 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI-------PGVELLELDVTDDASVQAAVDEVIARAGRIDV 76 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc-------CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence 46899999999999999999999999999999986553211 3588999999999999888764 699
Q ss_pred EEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 80 VINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 80 vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
|||++|..... .....+++|+.++.++++++ ++.+ ..++|++||.......| ..|+.+|...|.+
T Consensus 77 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 155 (270)
T PRK06179 77 LVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAPYMALYAASKHAVEGY 155 (270)
T ss_pred EEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCCCccHHHHHHHHHHHH
Confidence 99999974321 11356788888888888874 5566 78999999976654444 6899999999988
Q ss_pred HHhh-------CCCeEEEecCeeecCCCh-------hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDR-------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.. ++++++++||.+.++... .+..+.. .. ........ .........+|+|+.++.++..+
T Consensus 156 ~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~--~~~~~~~~~~~va~~~~~~~~~~ 231 (270)
T PRK06179 156 SESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDR-ER-AVVSKAVA--KAVKKADAPEVVADTVVKAALGP 231 (270)
T ss_pred HHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHH-HH-HHHHHHHH--hccccCCCHHHHHHHHHHHHcCC
Confidence 6653 699999999988765211 0110000 00 00000000 01112356789999999998876
Q ss_pred CCCCCceEEe
Q 047628 212 GTSMGKIYEL 221 (327)
Q Consensus 212 ~~~~~~~~~v 221 (327)
.. +..|..
T Consensus 232 ~~--~~~~~~ 239 (270)
T PRK06179 232 WP--KMRYTA 239 (270)
T ss_pred CC--CeeEec
Confidence 53 445654
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-18 Score=146.35 Aligned_cols=208 Identities=14% Similarity=0.016 Sum_probs=143.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|+||++++++|+++|++|++++|+.+.........+ .++.++++|+++.+++..+++ ++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG--ESALVIRADAGDVAAQKALAQALAEAFGRL 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 446799999999999999999999999999999997544322222222 357788999999887665543 57
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc--CCcceEEEEeccCC-CCC-CCchHHHhHHHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH--GGIMRFIQISCLGA-SSS-SPSRVFSTKAAAEEA 145 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~--~~v~~~v~~Ss~~v-~~~-~~~~y~~~K~~~E~~ 145 (327)
|+|||++|..... .....+++|+.++.++++++... . ..++|++||... ++. ....|+.+|.+.|.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~ 160 (249)
T PRK06500 82 DAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN-PASIVLNGSINAHIGMPNSSVYAASKAALLSL 160 (249)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc-CCEEEEEechHhccCCCCccHHHHHHHHHHHH
Confidence 9999999864321 12356789999999999999752 2 246777777443 332 237899999999998
Q ss_pred HHhh-------CCCeEEEecCeeecCCCh-------hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDR-------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
++.. ++++.+++|+.++++... ....+...+....++ ..+.+.+|+|+++..++...
T Consensus 161 ~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~~ 231 (249)
T PRK06500 161 AKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL---------GRFGTPEEIAKAVLYLASDE 231 (249)
T ss_pred HHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHcCcc
Confidence 8543 489999999999876211 111222222211111 12357799999999988754
Q ss_pred CC-CCCceEEecCC
Q 047628 212 GT-SMGKIYELGGP 224 (327)
Q Consensus 212 ~~-~~~~~~~v~~~ 224 (327)
.. ..|....+.++
T Consensus 232 ~~~~~g~~i~~~gg 245 (249)
T PRK06500 232 SAFIVGSEIIVDGG 245 (249)
T ss_pred ccCccCCeEEECCC
Confidence 42 24667777664
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=147.91 Aligned_cols=210 Identities=16% Similarity=0.080 Sum_probs=146.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
..+++++||||+|+||+++++.|+++|++|++++|+.++.....+..+ .++.++++|+++++++.++++ .+
T Consensus 8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 85 (255)
T PRK05717 8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG--ENAWFIAMDVADEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC--CceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 345789999999999999999999999999999887654332222222 357889999999988766543 36
Q ss_pred cEEEEcccccccc-C---------cchhHhhhhHHHHHHHHHHHHc--CCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET-R---------NYSFEDVNHFMAERIAGIAKEH--GGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-~---------~~~~~~~n~~~~~~l~~a~~~~--~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... . ....+++|+.++.++++++... .+..++|++||.......+ ..|+.+|.++|
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~ 165 (255)
T PRK05717 86 DALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLL 165 (255)
T ss_pred CEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHH
Confidence 9999999875321 1 1357789999999999998642 1125799999876543333 78999999999
Q ss_pred HHHHhh------CCCeEEEecCeeecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE------LPWATIMRPAAMIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~------~~~~~i~r~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++.+++||.+.++.... ...+..... ...+ ...+.+.+|+|.++..++..... .
T Consensus 166 ~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~va~~~~~l~~~~~~~~ 236 (255)
T PRK05717 166 ALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADH--AQHP-------AGRVGTVEDVAAMVAWLLSRQAGFV 236 (255)
T ss_pred HHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHh--hcCC-------CCCCcCHHHHHHHHHHHcCchhcCc
Confidence 888754 2788999999998753211 011111000 0111 12456889999999988865422 1
Q ss_pred CCceEEecCCc
Q 047628 215 MGKIYELGGPD 225 (327)
Q Consensus 215 ~~~~~~v~~~~ 225 (327)
.|+.+.+.++.
T Consensus 237 ~g~~~~~~gg~ 247 (255)
T PRK05717 237 TGQEFVVDGGM 247 (255)
T ss_pred cCcEEEECCCc
Confidence 57788887654
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-18 Score=150.17 Aligned_cols=213 Identities=14% Similarity=0.132 Sum_probs=150.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-h----hhcccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-R----HLKLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~----~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
+.++++|||||+|+||+++++.|+++|++|++..|+.+... . .+...+ .++.++.+|+++++++.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~ 130 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEG--RKAVALPGDLKDEAFCRQLVERAVK 130 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcC--CeEEEEecCCCCHHHHHHHHHHHHH
Confidence 33579999999999999999999999999988877643211 1 111112 357788999999988877664
Q ss_pred ---cccEEEEcccccccc---------CcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 ---KANVVINLIGREYET---------RNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
++|+|||+||..... .....+++|+.++.++++++...- +-.++|++||...+...+ ..|+.+|.
T Consensus 131 ~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~ 210 (300)
T PRK06128 131 ELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKA 210 (300)
T ss_pred HhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHH
Confidence 479999999864211 113578899999999999987531 024899999987765444 67999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh---hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR---LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+.+.. ++++.+++||.+.++... ............ . ....+.+.+|+|.+++.++..
T Consensus 211 a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~--~-------p~~r~~~p~dva~~~~~l~s~ 281 (300)
T PRK06128 211 AIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSE--T-------PMKRPGQPVEMAPLYVLLASQ 281 (300)
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcC--C-------CCCCCcCHHHHHHHHHHHhCc
Confidence 998887654 589999999999877321 111111111111 1 112456789999999988875
Q ss_pred CCC-CCCceEEecCCcccc
Q 047628 211 DGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~s 228 (327)
... ..|++|++.++..++
T Consensus 282 ~~~~~~G~~~~v~gg~~~~ 300 (300)
T PRK06128 282 ESSYVTGEVFGVTGGLLLS 300 (300)
T ss_pred cccCccCcEEeeCCCEeCc
Confidence 432 258899999876543
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-18 Score=146.13 Aligned_cols=204 Identities=15% Similarity=0.062 Sum_probs=143.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++|+||||||+||++++++|+++|++|++++|++++............+++.+.+|+.+++++.++++ ++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 34578999999999999999999999999999999875533322222111468889999999998877765 58
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHc---CCcceEEEEeccCCCCCC--CchHHHhHHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH---GGIMRFIQISCLGASSSS--PSRVFSTKAAAEE 144 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~---~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E~ 144 (327)
|+|||+++...... ....+++|+.++..+++++... + ..++|++||....... ...|..+|.+.+.
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~ 162 (237)
T PRK07326 84 DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRG-GGYIINISSLAGTNFFAGGAAYNASKFGLVG 162 (237)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHC-CeEEEEECChhhccCCCCCchHHHHHHHHHH
Confidence 99999998643211 1245778888888888877542 3 4689999997553222 2679999998877
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
+.+.. +++++++||+.+..+..... .. .. ....+..+|++++++.++..+......
T Consensus 163 ~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~-----------~~----~~--~~~~~~~~d~a~~~~~~l~~~~~~~~~ 225 (237)
T PRK07326 163 FSEAAMLDLRQYGIKVSTIMPGSVATHFNGHT-----------PS----EK--DAWKIQPEDIAQLVLDLLKMPPRTLPS 225 (237)
T ss_pred HHHHHHHHhcccCcEEEEEeeccccCcccccc-----------cc----hh--hhccCCHHHHHHHHHHHHhCCcccccc
Confidence 66553 58999999998864321000 00 00 011378899999999999877643445
Q ss_pred eEEecCCcc
Q 047628 218 IYELGGPDI 226 (327)
Q Consensus 218 ~~~v~~~~~ 226 (327)
...+..+.+
T Consensus 226 ~~~~~~~~~ 234 (237)
T PRK07326 226 KIEVRPSRP 234 (237)
T ss_pred ceEEecCCC
Confidence 555554443
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.4e-18 Score=148.04 Aligned_cols=196 Identities=18% Similarity=0.119 Sum_probs=135.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~v 80 (327)
|+|+||||||+||.++++.|+++|++|++++|++++........+ .++.++.+|+.+++++.++++ ++|+|
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 589999999999999999999999999999998654332222222 358889999999988877664 58999
Q ss_pred EEcccccccc------C---cchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 81 INLIGREYET------R---NYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 81 i~~a~~~~~~------~---~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
||++|..... + ....+++|+.++..++++ +++.+ ..++|++||.......+ ..|+.+|...|.+
T Consensus 79 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~ 157 (248)
T PRK10538 79 VNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQF 157 (248)
T ss_pred EECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCCCCCchhHHHHHHHHHH
Confidence 9999864211 1 134567888886555555 44555 67999999976543322 6899999999988
Q ss_pred HHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.. ++.+.+++||.+.|+...... +..... .....+ . ...++..+|+|++++.++..+..
T Consensus 158 ~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~-~~~~~~--~~~~~~-~---~~~~~~~~dvA~~~~~l~~~~~~ 225 (248)
T PRK10538 158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR-FKGDDG--KAEKTY-Q---NTVALTPEDVSEAVWWVATLPAH 225 (248)
T ss_pred HHHHHHHhcCCCcEEEEEeCCeecccccchhh-ccCcHH--HHHhhc-c---ccCCCCHHHHHHHHHHHhcCCCc
Confidence 7654 388999999998755321100 000000 000000 0 12356889999999999876543
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1e-18 Score=150.13 Aligned_cols=196 Identities=14% Similarity=0.090 Sum_probs=139.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
+++|||||+|+||+++++.|+++|++|++++|++.......... ....++.++.+|+.+++++.++++ ++|+
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68999999999999999999999999999999865432221111 111368889999999998887765 5799
Q ss_pred EEEccccccccC------c---chhHhhhhHHHHHHHHHHHH---cCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 80 VINLIGREYETR------N---YSFEDVNHFMAERIAGIAKE---HGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 80 vi~~a~~~~~~~------~---~~~~~~n~~~~~~l~~a~~~---~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
|||+++...... . ...+++|+.++.++++.+.. .+ ..++|++||...+...+ ..|+.+|...|.+
T Consensus 82 vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~ 160 (263)
T PRK06181 82 LVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGLTGVPTRSGYAASKHALHGF 160 (263)
T ss_pred EEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEecccccCCCCCccHHHHHHHHHHHH
Confidence 999998743221 1 23478899999999998753 23 46899999976654333 7899999999888
Q ss_pred HHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.. ++++.+++||.+..+.... ... ..+.... ..+.....+++++|+|+++..+++.+
T Consensus 161 ~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~---~~~--~~~~~~~--~~~~~~~~~~~~~dva~~i~~~~~~~ 226 (263)
T PRK06181 161 FDSLRIELADDGVAVTVVCPGFVATDIRKR---ALD--GDGKPLG--KSPMQESKIMSAEECAEAILPAIARR 226 (263)
T ss_pred HHHHHHHhhhcCceEEEEecCccccCcchh---hcc--ccccccc--cccccccCCCCHHHHHHHHHHHhhCC
Confidence 7543 4899999999887542211 000 0011111 11222247899999999999999854
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.5e-18 Score=132.07 Aligned_cols=195 Identities=17% Similarity=0.201 Sum_probs=143.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|||.|+||||.+|+.++++.+.+||+|++++|++++.... ..+..++.|+-|++++.+.+.+.|+||..-+..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~DaVIsA~~~~ 73 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLAGHDAVISAFGAG 73 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhcCCceEEEeccCC
Confidence 7899999999999999999999999999999998875432 257889999999999999999999999876654
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC-----------CCCC-chHHHhHHHHH--HHHHhh-CCC
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS-----------SSSP-SRVFSTKAAAE--EAVLRE-LPW 152 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~-----------~~~~-~~y~~~K~~~E--~~~~~~-~~~ 152 (327)
.... ..........|++..+.++ +.|++.+++.+.- +..| ..|..++..+| +.++.. .++
T Consensus 74 ~~~~----~~~~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae~L~~Lr~~~~l~ 148 (211)
T COG2910 74 ASDN----DELHSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAEFLDSLRAEKSLD 148 (211)
T ss_pred CCCh----hHHHHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHHHHHHHhhccCcc
Confidence 2211 1112344678999999999 9999999887652 2223 34556777777 445543 499
Q ss_pred eEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEec
Q 047628 153 ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222 (327)
Q Consensus 153 ~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~ 222 (327)
|+.+-|+.+|-|+.+.-. + -..+..+..- ..--+.|+..|.|.+++.-++++.+ ..+.|-+.
T Consensus 149 WTfvSPaa~f~PGerTg~-y---rlggD~ll~n---~~G~SrIS~aDYAiA~lDe~E~~~h-~rqRftv~ 210 (211)
T COG2910 149 WTFVSPAAFFEPGERTGN-Y---RLGGDQLLVN---AKGESRISYADYAIAVLDELEKPQH-IRQRFTVA 210 (211)
T ss_pred eEEeCcHHhcCCccccCc-e---EeccceEEEc---CCCceeeeHHHHHHHHHHHHhcccc-cceeeeec
Confidence 999999999987543211 0 0112222221 1224789999999999999999997 77777654
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=155.41 Aligned_cols=236 Identities=19% Similarity=0.217 Sum_probs=174.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCc--hhhhccc-------------C-CCCCeeEEeeCCCC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDD--PRHLKLM-------------G-DLGQIVPMKFNPRD 66 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~--~~~~~~~-------------~-~~~~v~~~~~Dl~~ 66 (327)
..++|+|||||||+|.-+++.|+..- .+++++.|..... ...+..+ + ...++..+.||+++
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 46899999999999999999999752 4899999976543 1112111 0 12578899999875
Q ss_pred h------hHHHHHhccccEEEEccccccccCc-chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC-----------
Q 047628 67 D------NTIKATMAKANVVINLIGREYETRN-YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS----------- 128 (327)
Q Consensus 67 ~------~~~~~~~~~~d~vi~~a~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~----------- 128 (327)
+ ..+....+++|+|||+|+.....++ .....+|..|++++++.|++..+.+-++++||..+.
T Consensus 91 ~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y 170 (467)
T KOG1221|consen 91 PDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPY 170 (467)
T ss_pred cccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccccccccc
Confidence 4 4556667789999999988655443 457788999999999999998768899999997552
Q ss_pred -------------------------------CCCCchHHHhHHHHHHHHHhhC--CCeEEEecCeeecCCChhHHHHHHH
Q 047628 129 -------------------------------SSSPSRVFSTKAAAEEAVLREL--PWATIMRPAAMIGTEDRLLNKWAQF 175 (327)
Q Consensus 129 -------------------------------~~~~~~y~~~K~~~E~~~~~~~--~~~~i~r~~~~~G~~~~~~~~~~~~ 175 (327)
+..|+.|.-+|..+|+++.+.. ++.+|+||+.|.......++.|...
T Consensus 171 ~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn 250 (467)
T KOG1221|consen 171 PMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDN 250 (467)
T ss_pred CccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCcccc
Confidence 1223789999999999998875 9999999999987644433333332
Q ss_pred Hh----------hcCceeeecCCCceecceeHHHHHHHHHHHhhc--CCC--CCCceEEecCCc--cccHHHHHHHHHHH
Q 047628 176 VK----------KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD--DGT--SMGKIYELGGPD--IFTVHELAELMYDT 239 (327)
Q Consensus 176 ~~----------~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~--~~~--~~~~~~~v~~~~--~~s~~el~~~i~~~ 239 (327)
.. +|..-.+..+.+...+.|.++.++.+++.+.-. ... ....+||+++.+ ++++.++.+...+.
T Consensus 251 ~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~~~~ 330 (467)
T KOG1221|consen 251 LNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELALRY 330 (467)
T ss_pred CCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHHHHh
Confidence 22 122234445778888999999999999865521 111 024599998754 59999999988887
Q ss_pred hh
Q 047628 240 IR 241 (327)
Q Consensus 240 ~g 241 (327)
.-
T Consensus 331 ~~ 332 (467)
T KOG1221|consen 331 FE 332 (467)
T ss_pred cc
Confidence 64
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=9.9e-19 Score=149.67 Aligned_cols=204 Identities=13% Similarity=0.073 Sum_probs=134.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-cccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-KANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-~~d~vi~~a 84 (327)
++++|||||||+||++++++|+++|++|++++|+++......... ....++.++.+|+++++++.+++. ++|+|||++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 468999999999999999999999999999999865422111100 011358889999999999998887 799999999
Q ss_pred ccccccC--------cchhHhhhhHHHHHHHH----HHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHh--
Q 047628 85 GREYETR--------NYSFEDVNHFMAERIAG----IAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLR-- 148 (327)
Q Consensus 85 ~~~~~~~--------~~~~~~~n~~~~~~l~~----a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~-- 148 (327)
|...... -...+++|+.++.++.+ .+++.+ .+++|++||.......+ ..|+.+|.++|.+.+.
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~ 160 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMH 160 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHH
Confidence 8643211 12355677776655544 455666 68999999975543333 6899999999876543
Q ss_pred -----hCCCeEEEecCeeecCCCh-hHHHHHHHHh-hcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 149 -----ELPWATIMRPAAMIGTEDR-LLNKWAQFVK-KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 149 -----~~~~~~i~r~~~~~G~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+++++++|||.+.-+... ....+..... ....+.. .+.......++.+|++..++.++..+.
T Consensus 161 ~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~ 230 (257)
T PRK09291 161 AELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDP-EDLAFPLEQFDPQEMIDAMVEVIPADT 230 (257)
T ss_pred HHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhh-hhhhccccCCCHHHHHHHHHHHhcCCC
Confidence 4699999999977422111 1111110000 0000111 011223455788899888888887544
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.2e-18 Score=146.73 Aligned_cols=207 Identities=15% Similarity=0.115 Sum_probs=141.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++.+|||||+|+||++++++|+++|++|++..++....... +...+ .++.++.+|+++.+++.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQG--GEALAVAADVADEADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCC--CcEEEEEeccCCHHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999988776543221111 11111 357789999999998887775
Q ss_pred cccEEEEccccccccC-----c----chhHhhhhHHHHHHHHHHHHcC------CcceEEEEeccCCCCCCC---chHHH
Q 047628 76 KANVVINLIGREYETR-----N----YSFEDVNHFMAERIAGIAKEHG------GIMRFIQISCLGASSSSP---SRVFS 137 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~-----~----~~~~~~n~~~~~~l~~a~~~~~------~v~~~v~~Ss~~v~~~~~---~~y~~ 137 (327)
.+|+|||+++...... . ...+++|+.++.++++++...- +-.++|++||.......+ ..|+.
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~ 159 (248)
T PRK06123 80 RLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAA 159 (248)
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHH
Confidence 4799999998743211 1 2457889999988888775431 012689999975432222 36999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
+|...|.+++.. ++++.++||+.++++... ..+..........++. -+.+++|+++++..++
T Consensus 160 sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~---------~~~~~~d~a~~~~~l~ 230 (248)
T PRK06123 160 SKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMG---------RGGTAEEVARAILWLL 230 (248)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHh
Confidence 999999877653 599999999999987321 1122222222111111 1236799999999988
Q ss_pred hcCCC-CCCceEEecCC
Q 047628 209 KDDGT-SMGKIYELGGP 224 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~ 224 (327)
..... ..|+.|++.++
T Consensus 231 ~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 231 SDEASYTTGTFIDVSGG 247 (248)
T ss_pred CccccCccCCEEeecCC
Confidence 76432 15789999875
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.7e-18 Score=167.05 Aligned_cols=218 Identities=20% Similarity=0.137 Sum_probs=154.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
..+++|||||+|+||+++++.|+++|++|++++|+.+.........+...++..+.+|+++++++.++++ ++|
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iD 500 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVD 500 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4579999999999999999999999999999999876543322222211368899999999998877765 579
Q ss_pred EEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCc-ceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 79 VVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGI-MRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 79 ~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v-~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
+|||++|...... -...+++|+.++.++++++. +.+ . .+||++||.......+ ..|+.+|...+
T Consensus 501 vvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~-~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~ 579 (681)
T PRK08324 501 IVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQG-LGGSIVFIASKNAVNPGPNFGAYGAAKAAEL 579 (681)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcEEEEECCccccCCCCCcHHHHHHHHHHH
Confidence 9999999643211 13467889999888877664 433 3 5899999976654333 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeee-cCCC--hhHHHHHHHHhhcCc----eeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 144 EAVLRE-------LPWATIMRPAAMI-GTED--RLLNKWAQFVKKFNF----FPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~-G~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+++.+ ++++.+++|+.+| +.+. .... .......+.. ....+.+.....+++.+|+|++++.++.
T Consensus 580 ~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s 658 (681)
T PRK08324 580 HLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWI-EARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFLAS 658 (681)
T ss_pred HHHHHHHHHhcccCeEEEEEeCceeecCCccccchhh-hhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHHhC
Confidence 988764 3889999999998 5421 1110 0000000100 0122344455678999999999999884
Q ss_pred --cCCCCCCceEEecCCcc
Q 047628 210 --DDGTSMGKIYELGGPDI 226 (327)
Q Consensus 210 --~~~~~~~~~~~v~~~~~ 226 (327)
.... .|++|++.++..
T Consensus 659 ~~~~~~-tG~~i~vdgG~~ 676 (681)
T PRK08324 659 GLLSKT-TGAIITVDGGNA 676 (681)
T ss_pred ccccCC-cCCEEEECCCch
Confidence 3333 688999998754
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=150.98 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=149.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc-cc-CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LM-GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~-~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++++++|||||+|+||++++++|+++|++|+++.|+......... .. ....++.++.+|+++.+++.++++
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 445799999999999999999999999999999997643221111 11 111357889999999998877764
Q ss_pred cccEEEEccccccccC---------cchhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 76 KANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
.+|+|||+|+...... -...+++|+.++.++++++... .+..++|++||...+...+ ..|+.+|.+.+
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~ 203 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIH 203 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHHH
Confidence 4799999998642211 1346788999999999998753 1125899999987765444 67999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.+.. ++++..++||.+..+... .......... .......+.+.+|+|++++.++.....
T Consensus 204 ~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~ll~~~~~~ 274 (290)
T PRK06701 204 AFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFG---------SNTPMQRPGQPEELAPAYVFLASPDSSY 274 (290)
T ss_pred HHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHH---------hcCCcCCCcCHHHHHHHHHHHcCcccCC
Confidence 887654 489999999988865211 1111111111 111224568889999999999986532
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..|..+++.++.
T Consensus 275 ~~G~~i~idgg~ 286 (290)
T PRK06701 275 ITGQMLHVNGGV 286 (290)
T ss_pred ccCcEEEeCCCc
Confidence 257888888764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.9e-18 Score=146.37 Aligned_cols=193 Identities=18% Similarity=0.065 Sum_probs=138.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
.+.+++++||||+|+||++++++|+++|++|++++|++++......... ...++.++.+|+++++++.++++
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELG 83 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3446789999999999999999999999999999998754322211111 11368889999999999888775
Q ss_pred cccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|+|||++|..... .. ...+++|+.++.++.+++.. .+ .+++|++||.......+ ..|+.+|.+
T Consensus 84 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a 162 (239)
T PRK07666 84 SIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAAVTSAYSASKFG 162 (239)
T ss_pred CccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCCCCcchHHHHHH
Confidence 589999999874321 11 24578899888888887753 44 57899999976543333 679999998
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.+++.. +++++++|||.+..+..... . ... +. ...++..+|+|+++..+++++.
T Consensus 163 ~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~------~-----~~~-~~---~~~~~~~~~~a~~~~~~l~~~~ 225 (239)
T PRK07666 163 VLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL------G-----LTD-GN---PDKVMQPEDLAEFIVAQLKLNK 225 (239)
T ss_pred HHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc------c-----ccc-cC---CCCCCCHHHHHHHHHHHHhCCC
Confidence 88776542 59999999998875421100 0 000 11 1245788999999999998763
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.9e-18 Score=144.71 Aligned_cols=211 Identities=16% Similarity=0.163 Sum_probs=145.1
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
|.+.+..++++||||+|.||+++++.|+++|++|.++.|+.+.....+.. .++.++.+|+++++++.++++
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~ 76 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKE 76 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHH
Confidence 66666779999999999999999999999999999887765433333322 147889999999998887765
Q ss_pred --cccEEEEcccccccc-----Cc---chhHhhhhHHHHHH----HHHHHHcCCcceEEEEeccCCCCC---CCchHHHh
Q 047628 76 --KANVVINLIGREYET-----RN---YSFEDVNHFMAERI----AGIAKEHGGIMRFIQISCLGASSS---SPSRVFST 138 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l----~~a~~~~~~v~~~v~~Ss~~v~~~---~~~~y~~~ 138 (327)
++|+|||++|..... +. ...+++|+.++..+ ++.+++.+ ..++|++||...... ....|+.+
T Consensus 77 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~as 155 (255)
T PRK06463 77 FGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAEGTTFYAIT 155 (255)
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCCCccHhHHH
Confidence 479999999874321 11 24567888886555 44444444 468999999765532 22679999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCC------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTED------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
|.+.+.+.+.. ++++.+++||.+-.+.. .....+....... .....+...+|+|++++
T Consensus 156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~va~~~~ 226 (255)
T PRK06463 156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNK---------TVLKTTGKPEDIANIVL 226 (255)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhC---------CCcCCCcCHHHHHHHHH
Confidence 99998887664 48899999998743210 0001111111111 11123467899999999
Q ss_pred HHhhcCCC-CCCceEEecCCc
Q 047628 206 AALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 206 ~~l~~~~~-~~~~~~~v~~~~ 225 (327)
.++..... ..|+.+.+.+++
T Consensus 227 ~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 227 FLASDDARYITGQVIVADGGR 247 (255)
T ss_pred HHcChhhcCCCCCEEEECCCe
Confidence 99876542 268888888765
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.1e-18 Score=145.07 Aligned_cols=209 Identities=18% Similarity=0.164 Sum_probs=145.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++.+++|||||+|.||++++++|+++|++|+++.|+..... . .++.++++|+++++++.++++ .
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~------~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 77 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL------P--EGVEFVAADLTTAEGCAAVARAVLERLGG 77 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc------C--CceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 355689999999999999999999999999999999865421 1 257889999999988775543 4
Q ss_pred ccEEEEccccccc----------cCcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC---CCchHHHhH
Q 047628 77 ANVVINLIGREYE----------TRNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS---SPSRVFSTK 139 (327)
Q Consensus 77 ~d~vi~~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~---~~~~y~~~K 139 (327)
+|+|||+||.... ......+++|+.++.++.+++ ++.+ ..++|++||...... ....|+.+|
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~~Y~~sK 156 (260)
T PRK06523 78 VDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLPESTTAYAAAK 156 (260)
T ss_pred CCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCCcchhHHHH
Confidence 7999999985321 111345678888887776654 4444 568999999766533 237899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHH-----------HHHhh-cCceeeecCCCceecceeHHH
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWA-----------QFVKK-FNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~i~~~D 199 (327)
.+++.+.+.. ++++.+++||.+..+... ....+. ..+.. ....+ ...+...+|
T Consensus 157 ~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~~ 229 (260)
T PRK06523 157 AALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP-------LGRPAEPEE 229 (260)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc-------cCCCCCHHH
Confidence 9998887654 489999999999876321 111111 00000 00011 123457799
Q ss_pred HHHHHHHHhhcCC-CCCCceEEecCCcccc
Q 047628 200 VAAAVTAALKDDG-TSMGKIYELGGPDIFT 228 (327)
Q Consensus 200 ~a~~~~~~l~~~~-~~~~~~~~v~~~~~~s 228 (327)
+|+++..++.... ...|+.+.+.++...|
T Consensus 230 va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 230 VAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred HHHHHHHHhCcccccccCceEEecCCccCC
Confidence 9999999987543 2268899998876544
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=146.02 Aligned_cols=206 Identities=16% Similarity=0.076 Sum_probs=146.4
Q ss_pred EEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---ccEEEEccccc
Q 047628 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---ANVVINLIGRE 87 (327)
Q Consensus 11 lI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d~vi~~a~~~ 87 (327)
+||||+|+||++++++|+++|++|++++|+++.............+++++.+|+++++++.++++. +|++||++|..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 699999999999999999999999999998654332222111113588899999999999988864 69999999864
Q ss_pred ccc--------CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhhC-----CC
Q 047628 88 YET--------RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLREL-----PW 152 (327)
Q Consensus 88 ~~~--------~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~~-----~~ 152 (327)
... .....+++|+.++.++.++....+ ..++|++||...+...+ ..|+.+|.+.+.+.+... ++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~ir 159 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAPVR 159 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhCce
Confidence 321 123567889999999999666555 67999999987764443 789999999999987753 66
Q ss_pred eEEEecCeeecCCChhH-----HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccc
Q 047628 153 ATIMRPAAMIGTEDRLL-----NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 153 ~~i~r~~~~~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~ 227 (327)
+..++|+.+-.+..... ..+...... .++. ..+...+|+|++++.++.++.. .|+.|++.+++++
T Consensus 160 v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~dva~~~~~l~~~~~~-~G~~~~v~gg~~~ 229 (230)
T PRK07041 160 VNTVSPGLVDTPLWSKLAGDAREAMFAAAAE--RLPA-------RRVGQPEDVANAILFLAANGFT-TGSTVLVDGGHAI 229 (230)
T ss_pred EEEEeecccccHHHHhhhccchHHHHHHHHh--cCCC-------CCCcCHHHHHHHHHHHhcCCCc-CCcEEEeCCCeec
Confidence 78888887653311000 001111111 1111 1234679999999999987654 6899999987653
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.7e-18 Score=147.10 Aligned_cols=152 Identities=17% Similarity=0.179 Sum_probs=117.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--------ccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--------KAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--------~~d 78 (327)
+++++||||+|+||+++++.|+++|++|++++|+++... .+.. .+++++.+|++|++++.++++ .+|
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~-~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id 78 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVA-ALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD 78 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence 478999999999999999999999999999999876532 2222 247889999999988876654 369
Q ss_pred EEEEccccccccC--------cchhHhhhhHH----HHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYETR--------NYSFEDVNHFM----AERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~~--------~~~~~~~n~~~----~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|||+||...... -...+++|+.+ +..+++.+++.+ ..++|++||.......+ ..|+.+|.++|.
T Consensus 79 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 157 (277)
T PRK05993 79 ALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPMKYRGAYNASKFAIEG 157 (277)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCCCccchHHHHHHHHHH
Confidence 9999998743211 12467788887 666777777777 67999999976543333 789999999999
Q ss_pred HHHh-------hCCCeEEEecCeeecC
Q 047628 145 AVLR-------ELPWATIMRPAAMIGT 164 (327)
Q Consensus 145 ~~~~-------~~~~~~i~r~~~~~G~ 164 (327)
+.+. .++++++++||.+-.+
T Consensus 158 ~~~~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 158 LSLTLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHHHHhhhhCCEEEEEecCCccCc
Confidence 8754 3599999999988643
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=9.9e-18 Score=143.08 Aligned_cols=209 Identities=16% Similarity=0.082 Sum_probs=147.5
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
.++.++++||||+|.||+++++.|+++|++|++++|+.+... . ..++.++++|+.+++++.++++.
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~-----~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETV-----D--GRPAEFHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhh-----c--CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 455689999999999999999999999999999999864411 1 13578899999999988877754
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||++|..... + ....+++|+.++..+++++.. .+...++|++||.......+ ..|+.+|.+.
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~ 155 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGL 155 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHH
Confidence 59999999864221 1 134678899999999988754 11135899999986654333 7899999999
Q ss_pred HHHHHhhC------CCeEEEecCeeecCCChh-H--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-
Q 047628 143 EEAVLREL------PWATIMRPAAMIGTEDRL-L--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG- 212 (327)
Q Consensus 143 E~~~~~~~------~~~~i~r~~~~~G~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 212 (327)
|.+.+... +.+..++||.+..+.... . ......... ..+ ...+...+|+|+.++.++....
T Consensus 156 ~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~p~~va~~~~~L~~~~~~ 226 (252)
T PRK07856 156 LNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAA--TVP-------LGRLATPADIAWACLFLASDLAS 226 (252)
T ss_pred HHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhh--cCC-------CCCCcCHHHHHHHHHHHcCcccC
Confidence 99887642 678888999886442110 0 000011111 111 1234577999999999887543
Q ss_pred CCCCceEEecCCcccc
Q 047628 213 TSMGKIYELGGPDIFT 228 (327)
Q Consensus 213 ~~~~~~~~v~~~~~~s 228 (327)
...|+.+.+.++...+
T Consensus 227 ~i~G~~i~vdgg~~~~ 242 (252)
T PRK07856 227 YVSGANLEVHGGGERP 242 (252)
T ss_pred CccCCEEEECCCcchH
Confidence 2268889998876544
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.4e-18 Score=147.33 Aligned_cols=187 Identities=16% Similarity=0.117 Sum_probs=135.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------ccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------ANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d~ 79 (327)
+++++||||+|+||+++++.|+++|++|++++|+++.............++.++++|+++++++.++++. +|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4789999999999999999999999999999998655332222221112688999999999988877653 699
Q ss_pred EEEcccccccc---------CcchhHhhhhHHHHHHHH----HHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 80 VINLIGREYET---------RNYSFEDVNHFMAERIAG----IAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 80 vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~----a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+||++|..... .....+++|+.++.++++ ++++.+ ..++|++||.......| ..|+.+|.+.+.
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 160 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLPGAGAYSASKAAAIK 160 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence 99999874321 113467888888888776 445555 57899999865543333 679999999998
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.. ++++++++||.+.++... ...... ..++..+|+++.++.++.++.
T Consensus 161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~-----------~~~~~~-------~~~~~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 161 YLESLRVELRPAGVRVVTIAPGYIRTPMTA-----------HNPYPM-------PFLMDADRFAARAARAIARGR 217 (257)
T ss_pred HHHHHHHHhhccCcEEEEEecCCCcCchhh-----------cCCCCC-------CCccCHHHHHHHHHHHHhCCC
Confidence 87543 599999999999754210 000100 113578999999999998654
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=147.44 Aligned_cols=189 Identities=17% Similarity=0.152 Sum_probs=135.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.+++++++||||||.||+++++.|+++|++|++++|+++......... .++.++.+|+++++++.++++ +
T Consensus 2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (273)
T PRK07825 2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL---GLVVGGPLDVTDPASFAAFLDAVEADLGP 78 (273)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 345679999999999999999999999999999999865533222222 147888999999998766554 4
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||++|...... -...+++|+.++..+++++ ++.+ ..++|++||.......+ ..|+.+|...
T Consensus 79 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 157 (273)
T PRK07825 79 IDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVPGMATYCASKHAV 157 (273)
T ss_pred CCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCCCCcchHHHHHHH
Confidence 699999999743211 1345678888777766655 4555 67999999986654333 6799999877
Q ss_pred HHHHHh-------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLR-------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.+. .++++++++|+.+-.+ +.. +. . ......+++.+|+|+.++.++.++..
T Consensus 158 ~~~~~~l~~el~~~gi~v~~v~Pg~v~t~---~~~--------~~--~----~~~~~~~~~~~~va~~~~~~l~~~~~ 218 (273)
T PRK07825 158 VGFTDAARLELRGTGVHVSVVLPSFVNTE---LIA--------GT--G----GAKGFKNVEPEDVAAAIVGTVAKPRP 218 (273)
T ss_pred HHHHHHHHHHhhccCcEEEEEeCCcCcch---hhc--------cc--c----cccCCCCCCHHHHHHHHHHHHhCCCC
Confidence 765433 3599999999987522 110 00 0 11123578999999999999987654
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.6e-18 Score=144.86 Aligned_cols=210 Identities=16% Similarity=0.129 Sum_probs=147.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+..+++|||||+|+||+++++.|+++|++|+++.|+.... ....... ..++..+.+|+++++++.++++ .+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 90 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLL-GGNAKGLVCDVSDSQSVEAAVAAVISAFGRI 90 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhh-CCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 3467999999999999999999999999999999976532 1111111 1346788999999998877765 46
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E 143 (327)
|+|||++|...... ....+++|+.++.++++++.. .+ ..+||++||....... ...|+.+|.+.+
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 169 (255)
T PRK06841 91 DILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALERHVAYCASKAGVV 169 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCCCCCchHHHHHHHHH
Confidence 99999998743211 123678899999999988764 34 5699999997543222 268999999988
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChh-HH-HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRL-LN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.+.. ++.+..++||.+..+.... .. ........ ..+ ...+.+.+|+|++++.++.....
T Consensus 170 ~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~va~~~~~l~~~~~~~ 240 (255)
T PRK06841 170 GMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKK--LIP-------AGRFAYPEEIAAAALFLASDAAAM 240 (255)
T ss_pred HHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHh--cCC-------CCCCcCHHHHHHHHHHHcCccccC
Confidence 877653 4889999999887542111 00 01111111 111 13467889999999999976543
Q ss_pred CCCceEEecCCcc
Q 047628 214 SMGKIYELGGPDI 226 (327)
Q Consensus 214 ~~~~~~~v~~~~~ 226 (327)
..|+.+.+.++..
T Consensus 241 ~~G~~i~~dgg~~ 253 (255)
T PRK06841 241 ITGENLVIDGGYT 253 (255)
T ss_pred ccCCEEEECCCcc
Confidence 2578888887653
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-17 Score=140.52 Aligned_cols=200 Identities=20% Similarity=0.122 Sum_probs=141.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc------cccE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------KANV 79 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~d~ 79 (327)
..++++||||+|+||++++++|+++|++|+++.|+.+... ..+++.+|+++++++.++++ ++|+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~ 71 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF----------PGELFACDLADIEQTAATLAQINEIHPVDA 71 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc----------CceEEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence 3578999999999999999999999999999999875411 13577999999998877765 5799
Q ss_pred EEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC-CCchHHHhHHHHHHHH
Q 047628 80 VINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS-SPSRVFSTKAAAEEAV 146 (327)
Q Consensus 80 vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~-~~~~y~~~K~~~E~~~ 146 (327)
|||+++...... ....+++|+.++.++.+++ ++.+ ..++|++||...+.. ....|+.+|...|.+.
T Consensus 72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~Y~~sK~a~~~~~ 150 (234)
T PRK07577 72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIFGALDRTSYSAAKSALVGCT 150 (234)
T ss_pred EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccccCCCCchHHHHHHHHHHHHH
Confidence 999998743211 1235677777776666554 4455 679999999876533 3478999999998877
Q ss_pred Hhh-------CCCeEEEecCeeecCCChhH----HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDRLL----NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
+.. ++.++++|||.+..+..... .......... .+ .......+|+|++++.++..+.. .
T Consensus 151 ~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~l~~~~~~~~ 221 (234)
T PRK07577 151 RTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLAS--IP-------MRRLGTPEEVAAAIAFLLSDDAGFI 221 (234)
T ss_pred HHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhc--CC-------CCCCcCHHHHHHHHHHHhCcccCCc
Confidence 643 59999999998875531100 1111111111 11 11234679999999999976532 2
Q ss_pred CCceEEecCCc
Q 047628 215 MGKIYELGGPD 225 (327)
Q Consensus 215 ~~~~~~v~~~~ 225 (327)
.|+.+.+.++.
T Consensus 222 ~g~~~~~~g~~ 232 (234)
T PRK07577 222 TGQVLGVDGGG 232 (234)
T ss_pred cceEEEecCCc
Confidence 57888888764
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.9e-18 Score=144.38 Aligned_cols=210 Identities=17% Similarity=0.119 Sum_probs=145.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++++++|||||||+||+++++.|+++|++|+++ .|+++.......... ...++.++.+|+++++++.++++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG 82 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 456799999999999999999999999999998 887654322222111 11358889999999998877765
Q ss_pred cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHH
Q 047628 76 KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~ 141 (327)
++|+|||++|..... + ....+++|+.++.++++++.. .+ ..++|++||....... ...|+.+|..
T Consensus 83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK~a 161 (247)
T PRK05565 83 KIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASCEVLYSASKGA 161 (247)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCCccHHHHHHHH
Confidence 689999999875221 1 134677889988888777654 33 4679999997554332 2679999988
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+++.. ++++++++||.+..+..... ......... .. ....+...+|++++++.++.....
T Consensus 162 ~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~va~~~~~l~~~~~~ 232 (247)
T PRK05565 162 VNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAE--EI-------PLGRLGKPEEIAKVVLFLASDDAS 232 (247)
T ss_pred HHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHh--cC-------CCCCCCCHHHHHHHHHHHcCCccC
Confidence 77766543 58999999998865422211 111111111 01 112356789999999999876442
Q ss_pred -CCCceEEecCC
Q 047628 214 -SMGKIYELGGP 224 (327)
Q Consensus 214 -~~~~~~~v~~~ 224 (327)
..|+.+++.++
T Consensus 233 ~~~g~~~~~~~~ 244 (247)
T PRK05565 233 YITGQIITVDGG 244 (247)
T ss_pred CccCcEEEecCC
Confidence 25778888775
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.3e-18 Score=144.97 Aligned_cols=215 Identities=14% Similarity=0.041 Sum_probs=148.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC---CCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG---DLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
.+++++++||||+|.||+++++.|+++|++|++++|+.+.......... ...++.++++|+++++++.++++
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA 83 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3556899999999999999999999999999999998655332222211 12357889999999988887765
Q ss_pred --cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+||...... -...+++|+.++..+++++. +.+ ..++|++||.......+ ..|+.+|
T Consensus 84 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (260)
T PRK07063 84 FGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIPGCFPYPVAK 162 (260)
T ss_pred hCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCCCchHHHHHH
Confidence 4799999999642211 12456788888888888764 334 46899999976654333 6799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHH-----H-HHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLN-----K-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.+.+.+.+.. ++++..++||.+-.+... ... . ...... ...+ ...+...+|+|.+++
T Consensus 163 aa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~-------~~r~~~~~~va~~~~ 233 (260)
T PRK07063 163 HGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETL--ALQP-------MKRIGRPEEVAMTAV 233 (260)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHH--hcCC-------CCCCCCHHHHHHHHH
Confidence 9999888764 488999999987543111 000 0 000011 0111 113456799999999
Q ss_pred HHhhcCCC-CCCceEEecCCcccc
Q 047628 206 AALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 206 ~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
.++..... ..|+...+.++..+.
T Consensus 234 fl~s~~~~~itG~~i~vdgg~~~~ 257 (260)
T PRK07063 234 FLASDEAPFINATCITIDGGRSVL 257 (260)
T ss_pred HHcCccccccCCcEEEECCCeeee
Confidence 99876432 268888888775543
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-18 Score=144.05 Aligned_cols=210 Identities=18% Similarity=0.117 Sum_probs=143.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|+||+++++.|+++|+.|.+..|+.++........+ .++.++.+|+++.+++.++++ .+
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG--ERVKIFPANLSDRDEVKALGQKAEADLEGV 81 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 456899999999999999999999999999888887654332222222 357888999999988877653 47
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC--CCchHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS--SPSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E 143 (327)
|+|||++|..... .....+++|+.++.++++++.. .+ ..+||++||...... ....|+.+|.+.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~ 160 (245)
T PRK12936 82 DILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMI 160 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCCCcchHHHHHHHH
Confidence 9999999874321 1134678899998888887643 34 568999999654322 2367999999777
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SM 215 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~ 215 (327)
.+.+.. ++++++++|+.+..+............. ....+ ...+.+.+|+++++..++..... ..
T Consensus 161 ~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~-~~~~~-------~~~~~~~~~ia~~~~~l~~~~~~~~~ 232 (245)
T PRK12936 161 GFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAI-MGAIP-------MKRMGTGAEVASAVAYLASSEAAYVT 232 (245)
T ss_pred HHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHH-hcCCC-------CCCCcCHHHHHHHHHHHcCccccCcC
Confidence 666542 4899999999775432111111110000 01111 12355689999999988865432 25
Q ss_pred CceEEecCCc
Q 047628 216 GKIYELGGPD 225 (327)
Q Consensus 216 ~~~~~v~~~~ 225 (327)
|+.+++.++.
T Consensus 233 G~~~~~~~g~ 242 (245)
T PRK12936 233 GQTIHVNGGM 242 (245)
T ss_pred CCEEEECCCc
Confidence 8899998863
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=141.94 Aligned_cols=210 Identities=16% Similarity=0.112 Sum_probs=145.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh-cccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++||||+|+||+++++.|+++|++|+++.|+........ .... ...++.++.+|+.+++++.++++ .+
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 368999999999999999999999999999999854211111 1111 11358899999999998877764 37
Q ss_pred cEEEEcccccccc-----C---cchhHhhhhHHHHHHHH----HHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----R---NYSFEDVNHFMAERIAG----IAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~----a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||++|..... + ....+++|+.++.++.+ .+++.+ ..+||++||.......+ ..|..+|.+.+
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~ 160 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFGQTNYSAAKAGMI 160 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence 9999999864321 1 13456788888887755 445555 67999999976654333 67999999888
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.+ ++++.+++|+.+.++.... ............ + ...+...+|+++++..++..... .
T Consensus 161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~va~~~~~l~~~~~~~~ 231 (245)
T PRK12824 161 GFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQI--P-------MKRLGTPEEIAAAVAFLVSEAAGFI 231 (245)
T ss_pred HHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcC--C-------CCCCCCHHHHHHHHHHHcCccccCc
Confidence 776653 4899999999988653221 111111111111 1 12345679999999888865321 2
Q ss_pred CCceEEecCCcc
Q 047628 215 MGKIYELGGPDI 226 (327)
Q Consensus 215 ~~~~~~v~~~~~ 226 (327)
.|+.+++.++..
T Consensus 232 ~G~~~~~~~g~~ 243 (245)
T PRK12824 232 TGETISINGGLY 243 (245)
T ss_pred cCcEEEECCCee
Confidence 688999998754
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=143.03 Aligned_cols=204 Identities=14% Similarity=0.076 Sum_probs=143.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++++++|||||+|.||++++++|++.|++|++++|+.... .++..+++|+++++++.++++ .+
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i 73 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI 73 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5568999999999999999999999999999999986542 147889999999998877664 47
Q ss_pred cEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... +. ...+++|+.++..+++++.. .+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 74 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaal~ 152 (258)
T PRK06398 74 DILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTRNAAAYVTSKHAVL 152 (258)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCCCCchhhhhHHHHH
Confidence 9999999874321 11 23568899998888887653 34 46899999987654333 78999999999
Q ss_pred HHHHhhC------CCeEEEecCeeecCCChhH--------HH-HHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 144 EAVLREL------PWATIMRPAAMIGTEDRLL--------NK-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 144 ~~~~~~~------~~~~i~r~~~~~G~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+.+... +.+..++||.+-.+..... +. +...... ++.......+...+|+|++++.++
T Consensus 153 ~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~eva~~~~~l~ 226 (258)
T PRK06398 153 GLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------WGEMHPMKRVGKPEEVAYVVAFLA 226 (258)
T ss_pred HHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------hhhcCCcCCCcCHHHHHHHHHHHc
Confidence 9887642 7789999997753311000 00 0000000 001111124567899999999988
Q ss_pred hcCCC-CCCceEEecCCc
Q 047628 209 KDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~ 225 (327)
..... ..|+.+.+.++.
T Consensus 227 s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 227 SDLASFITGECVTVDGGL 244 (258)
T ss_pred CcccCCCCCcEEEECCcc
Confidence 75432 267788887764
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.3e-17 Score=142.41 Aligned_cols=209 Identities=16% Similarity=0.099 Sum_probs=144.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc-ccCCCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMGDLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
.++++++||||+|+||+++++.|++.|++|+++.|+.......+. ..+ .++.++++|+.+++++.++++.
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 80 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG--DRAIALQADVTDREQVQAMFATATEHFGK 80 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 345799999999999999999999999999887664332222221 111 3578899999999988877653
Q ss_pred -ccEEEEccccccc------c-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchH
Q 047628 77 -ANVVINLIGREYE------T-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRV 135 (327)
Q Consensus 77 -~d~vi~~a~~~~~------~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y 135 (327)
+|++||+++.... . + ....+++|+.++.++++++.. .+ ..++|++||....... ...|
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y 159 (253)
T PRK08642 81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQNPVVPYHDY 159 (253)
T ss_pred CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCccch
Confidence 8999999975310 0 0 123578899999999988753 33 4689999986543222 2689
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+.+|.+.|.+++.. ++.+..++||.+..+... .-........+ ..+ ...+.+.+|+|+++..
T Consensus 160 ~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~va~~~~~ 230 (253)
T PRK08642 160 TTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAA--TTP-------LRKVTTPQEFADAVLF 230 (253)
T ss_pred HHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHh--cCC-------cCCCCCHHHHHHHHHH
Confidence 99999999998875 378899999988643111 01111111111 112 1346888999999999
Q ss_pred HhhcCC-CCCCceEEecCCc
Q 047628 207 ALKDDG-TSMGKIYELGGPD 225 (327)
Q Consensus 207 ~l~~~~-~~~~~~~~v~~~~ 225 (327)
++.... ...|+.+.+.++.
T Consensus 231 l~~~~~~~~~G~~~~vdgg~ 250 (253)
T PRK08642 231 FASPWARAVTGQNLVVDGGL 250 (253)
T ss_pred HcCchhcCccCCEEEeCCCe
Confidence 997543 2268888888763
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=140.94 Aligned_cols=209 Identities=19% Similarity=0.147 Sum_probs=144.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh----hhcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR----HLKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
.+.++++||||+|+||+++++.|+++|++|+++.|+.+.... .+...+ .++.++.+|+++++++.++++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAG--GRAIAVQADVADAAAVTRLFDAAETA 80 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 446899999999999999999999999999888776543211 111112 358889999999998888776
Q ss_pred --cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 76 --KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
++|+|||++|..... . ....+++|+.++.++++++...- ...++|++||.......| ..|+.+|...
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 160 (245)
T PRK12937 81 FGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAV 160 (245)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHH
Confidence 479999999874321 1 12456789999999998876542 124899999876654333 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCC--ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTE--DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+++.. ++.+++++||.+-.+. ..........+.+. .+ ...+.+.+|+++++..++.....
T Consensus 161 ~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~d~a~~~~~l~~~~~~ 231 (245)
T PRK12937 161 EGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGL--AP-------LERLGTPEEIAAAVAFLAGPDGA 231 (245)
T ss_pred HHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhc--CC-------CCCCCCHHHHHHHHHHHcCcccc
Confidence 9888654 4888999999876442 11111122222211 11 12345679999999998876432
Q ss_pred -CCCceEEecCC
Q 047628 214 -SMGKIYELGGP 224 (327)
Q Consensus 214 -~~~~~~~v~~~ 224 (327)
..|+.+++.++
T Consensus 232 ~~~g~~~~~~~g 243 (245)
T PRK12937 232 WVNGQVLRVNGG 243 (245)
T ss_pred CccccEEEeCCC
Confidence 25778888764
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.7e-17 Score=142.49 Aligned_cols=210 Identities=17% Similarity=0.112 Sum_probs=145.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.++++|||||+|+||.++++.|+++|++|++++|+.++........ ....++.++.+|+++++++.++++ +
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999999999999999999865432221111 111357889999999998877665 5
Q ss_pred ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH-----cCCcceEEEEeccCCCCCC--CchHHHhHHH
Q 047628 77 ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE-----HGGIMRFIQISCLGASSSS--PSRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~-----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~ 141 (327)
+|+|||+||..... .....+.+|+.++.++++++.. .+ ..++|++||....... ...|+.+|..
T Consensus 88 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~sK~a 166 (263)
T PRK07814 88 LDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSG-GGSVINISSTMGRLAGRGFAAYGTAKAA 166 (263)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcC-CeEEEEEccccccCCCCCCchhHHHHHH
Confidence 79999999863221 1234678899999999999864 33 4689999997554322 3789999999
Q ss_pred HHHHHHhhC------CCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLREL------PWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~~------~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
++.+.+... +.+..++||.+..+..... ..+....... .+ ...+...+|+|++++.++....
T Consensus 167 ~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~~~~~l~~~~~ 237 (263)
T PRK07814 167 LAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKA--TP-------LRRLGDPEDIAAAAVYLASPAG 237 (263)
T ss_pred HHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCccc
Confidence 998887653 6788889988764321110 1111111110 11 1234578999999999987542
Q ss_pred C-CCCceEEecCC
Q 047628 213 T-SMGKIYELGGP 224 (327)
Q Consensus 213 ~-~~~~~~~v~~~ 224 (327)
. ..|+.+.+.++
T Consensus 238 ~~~~g~~~~~~~~ 250 (263)
T PRK07814 238 SYLTGKTLEVDGG 250 (263)
T ss_pred cCcCCCEEEECCC
Confidence 2 25777777764
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.8e-18 Score=143.99 Aligned_cols=208 Identities=18% Similarity=0.123 Sum_probs=138.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc-------cc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK-------AN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~-------~d 78 (327)
++++||||+|+||++++++|+++|++|+++ .|+++.......... ...++..+.+|+.|++++.++++. +|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 579999999999999999999999999875 454433221111110 113578899999999988887764 58
Q ss_pred EEEEccccccccC----c-----chhHhhhhHHHHHHHHHHHHcC------CcceEEEEeccCCCCCCC---chHHHhHH
Q 047628 79 VVINLIGREYETR----N-----YSFEDVNHFMAERIAGIAKEHG------GIMRFIQISCLGASSSSP---SRVFSTKA 140 (327)
Q Consensus 79 ~vi~~a~~~~~~~----~-----~~~~~~n~~~~~~l~~a~~~~~------~v~~~v~~Ss~~v~~~~~---~~y~~~K~ 140 (327)
+|||+++...... . ...+++|+.++..+++++...- +-.+||++||.......| ..|+.+|.
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~ 161 (247)
T PRK09730 82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG 161 (247)
T ss_pred EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence 9999998642211 1 2467888888877777654321 024699999975543333 46999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
..|.+++.. +++++++||+.++++... ..+......... .+. ....+.+|+|++++.++...
T Consensus 162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~dva~~~~~~~~~~ 232 (247)
T PRK09730 162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSN--IPM-------QRGGQPEEVAQAIVWLLSDK 232 (247)
T ss_pred HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHhhcChh
Confidence 998877542 589999999999987421 112111112111 111 01236799999999988754
Q ss_pred CC-CCCceEEecCC
Q 047628 212 GT-SMGKIYELGGP 224 (327)
Q Consensus 212 ~~-~~~~~~~v~~~ 224 (327)
.. ..|+.|++.++
T Consensus 233 ~~~~~g~~~~~~g~ 246 (247)
T PRK09730 233 ASYVTGSFIDLAGG 246 (247)
T ss_pred hcCccCcEEecCCC
Confidence 32 15778877764
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=142.33 Aligned_cols=211 Identities=13% Similarity=0.097 Sum_probs=147.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.++++|||||+|.||++++++|+++|++|++++|+.++......... ...++..+.+|+++++++.++++ .
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 346799999999999999999999999999999998655332222111 11357788999999998887764 3
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC--CCchHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS--SPSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~ 142 (327)
+|+|||++|..... + -...+++|+.++..+++++.. .+ ..++|++||...... ....|+.+|.+.
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 165 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRDTITPYAASKGAV 165 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCCCCcchHHHHHHH
Confidence 79999999864221 1 124678888888888887654 33 468999999754322 237899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++.+++||.+..+..... ..+...+... .+ ...+...+|++.++..++....
T Consensus 166 ~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~--~p-------~~~~~~~~~va~~~~~l~~~~~ 236 (254)
T PRK08085 166 KMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKR--TP-------AARWGDPQELIGAAVFLSSKAS 236 (254)
T ss_pred HHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHhCccc
Confidence 9988765 49999999999876532111 1111112111 11 1245678999999999887543
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|++..+.++.
T Consensus 237 ~~i~G~~i~~dgg~ 250 (254)
T PRK08085 237 DFVNGHLLFVDGGM 250 (254)
T ss_pred cCCcCCEEEECCCe
Confidence 2 267777777754
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.8e-18 Score=145.35 Aligned_cols=195 Identities=15% Similarity=0.106 Sum_probs=135.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--------ccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--------KAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--------~~d 78 (327)
+++++||||+|+||+++++.|+++|++|+++.|+.++... +.. .+++.+.+|+.+.+++.++++ .+|
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~-~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 76 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR-MNS----LGFTGILLDLDDPESVERAADEVIALTDNRLY 76 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH-HHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence 3689999999999999999999999999999998765322 221 147888999999887765543 358
Q ss_pred EEEEcccccccc--------CcchhHhhhhHHHHHH----HHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYET--------RNYSFEDVNHFMAERI----AGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l----~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
.+||++|..... .....+++|+.++.++ ++++++.+ ..++|++||.......+ ..|+.+|...|.
T Consensus 77 ~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~ 155 (256)
T PRK08017 77 GLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTPGRGAYAASKYALEA 155 (256)
T ss_pred EEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence 999999863211 1134667888777665 56666676 67999999965433332 789999999998
Q ss_pred HHHh-------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 145 AVLR-------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 145 ~~~~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+. .++++++++||.+..+ +...... .. ...+....+.....+++++|+++++..+++++..
T Consensus 156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~---~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~ 225 (256)
T PRK08017 156 WSDALRMELRHSGIKVSLIEPGPIRTR---FTDNVNQ-TQ--SDKPVENPGIAARFTLGPEAVVPKLRHALESPKP 225 (256)
T ss_pred HHHHHHHHHhhcCCEEEEEeCCCcccc---hhhcccc-hh--hccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCC
Confidence 7643 3589999999877532 1111100 00 0111111222334579999999999999987765
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.1e-17 Score=142.95 Aligned_cols=212 Identities=17% Similarity=0.163 Sum_probs=147.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.+++|+||||+|+||+++++.|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++ +
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 446899999999999999999999999999999987654322111110 11357888999999998877654 4
Q ss_pred ccEEEEcccccccc-------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHHHH
Q 047628 77 ANVVINLIGREYET-------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAAAE 143 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E 143 (327)
+|++||+++..... .....+++|+.++.++++++.. .+ ..++|++||....... ...|+.+|.+.+
T Consensus 89 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 167 (255)
T PRK06113 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCcchhHHHHHHHH
Confidence 69999999864321 1123478899999999998863 33 3589999997654332 278999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCCh-h-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDR-L-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+++.. ++.+.++.||.+..+... . .+.+.....+. .+ ...+...+|++.+++.++.....
T Consensus 168 ~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~d~a~~~~~l~~~~~~~ 238 (255)
T PRK06113 168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQH--TP-------IRRLGQPQDIANAALFLCSPAASW 238 (255)
T ss_pred HHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCccccC
Confidence 988764 378899999987643211 1 11121112111 11 12346779999999999875432
Q ss_pred CCCceEEecCCcc
Q 047628 214 SMGKIYELGGPDI 226 (327)
Q Consensus 214 ~~~~~~~v~~~~~ 226 (327)
..|+.+++.++..
T Consensus 239 ~~G~~i~~~gg~~ 251 (255)
T PRK06113 239 VSGQILTVSGGGV 251 (255)
T ss_pred ccCCEEEECCCcc
Confidence 2588999988754
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.5e-17 Score=139.30 Aligned_cols=209 Identities=15% Similarity=0.122 Sum_probs=145.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++++||||+|.||++++++|+++|++|+++.|+.... ...+...+ .++..+.+|+++++++..+++ +
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFGH 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5568999999999999999999999999999999865221 11222222 358899999999998876654 4
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~ 142 (327)
+|++||++|...... ....+++|+.++.++++++.. .+...++|++||...+... ...|+.+|.+.
T Consensus 81 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~ 160 (248)
T TIGR01832 81 IDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGV 160 (248)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHH
Confidence 799999998743211 134567899998888888753 2212589999997665433 36899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHH---HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLN---KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++.+++||.+..+...... ....... ...+ ...++..+|+|++++.++....
T Consensus 161 ~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~dva~~~~~l~s~~~ 231 (248)
T TIGR01832 161 AGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAIL--ERIP-------AGRWGTPDDIGGPAVFLASSAS 231 (248)
T ss_pred HHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHH--hcCC-------CCCCcCHHHHHHHHHHHcCccc
Confidence 9887654 489999999988755321110 0000111 0111 2367889999999999997544
Q ss_pred C-CCCceEEecCC
Q 047628 213 T-SMGKIYELGGP 224 (327)
Q Consensus 213 ~-~~~~~~~v~~~ 224 (327)
. ..|+++.+.++
T Consensus 232 ~~~~G~~i~~dgg 244 (248)
T TIGR01832 232 DYVNGYTLAVDGG 244 (248)
T ss_pred cCcCCcEEEeCCC
Confidence 2 14777777664
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.4e-17 Score=140.96 Aligned_cols=203 Identities=19% Similarity=0.197 Sum_probs=141.3
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh----hhcccCCCCCeeEEeeCCCChhHHHHHhcc-------cc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR----HLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------AN 78 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d 78 (327)
++|||++|+||+++++.|+++|++|++++|+...... .+...+ .++.++.+|+++++++.+++++ +|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYG--VKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999997632211 111111 3578899999999988887754 59
Q ss_pred EEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCC-CCC-CCchHHHhHHHHHH
Q 047628 79 VVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGA-SSS-SPSRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v-~~~-~~~~y~~~K~~~E~ 144 (327)
+|||++|..... .....+++|+.++.++++++.. .+ .++|+++||... ++. ....|+.+|.+.+.
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~ 157 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGNAGQANYAASKAGVIG 157 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCCchhHHHHHHHHH
Confidence 999999974321 1245677899999999998865 34 569999999654 332 23789999998887
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHH-HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SM 215 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~ 215 (327)
+.+.. ++.+++++|+.+.++...... ......... .+ ...+.+.+|++++++.++..... ..
T Consensus 158 ~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~~~~~~~~~~~ 228 (239)
T TIGR01830 158 FTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQ--IP-------LGRFGTPEEVANAVAFLASDEASYIT 228 (239)
T ss_pred HHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhc--CC-------cCCCcCHHHHHHHHHHHhCcccCCcC
Confidence 76543 589999999987654222111 111112111 11 12356789999999988854321 16
Q ss_pred CceEEecCC
Q 047628 216 GKIYELGGP 224 (327)
Q Consensus 216 ~~~~~v~~~ 224 (327)
|+.|++.++
T Consensus 229 g~~~~~~~g 237 (239)
T TIGR01830 229 GQVIHVDGG 237 (239)
T ss_pred CCEEEeCCC
Confidence 789999764
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-17 Score=141.46 Aligned_cols=215 Identities=20% Similarity=0.170 Sum_probs=147.1
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK--- 76 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~--- 76 (327)
|.+.+..++++||||+|+||++++++|+++|++|+++.|+.+.......... ...++..+.+|+++++++.++++.
T Consensus 1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 5556667899999999999999999999999999999998765322222111 113588899999999988877653
Q ss_pred ----ccEEEEccccccccC---------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 77 ----ANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 77 ----~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
+|+|||++|...... ....+++|+.++..+++++ ++.+ ..++|++||.......+ ..|+.
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~ 159 (253)
T PRK06172 81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPKMSIYAA 159 (253)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCCCchhHH
Confidence 599999998642111 1345678888887666644 3444 46899999976654333 78999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH----HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL----NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+|.+.+.+.+.. ++++..+.||.+-.+..... +........ ..+ ...+...+|+++.++.
T Consensus 160 sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~p~~ia~~~~~ 230 (253)
T PRK06172 160 SKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAA--MHP-------VGRIGKVEEVASAVLY 230 (253)
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhc--cCC-------CCCccCHHHHHHHHHH
Confidence 999998887654 38889999998753321110 111111110 011 1234678999999999
Q ss_pred HhhcCC-CCCCceEEecCCc
Q 047628 207 ALKDDG-TSMGKIYELGGPD 225 (327)
Q Consensus 207 ~l~~~~-~~~~~~~~v~~~~ 225 (327)
++.... ...|+.+.+.++.
T Consensus 231 l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 231 LCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred HhCccccCcCCcEEEECCCc
Confidence 987643 2268888888864
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.3e-17 Score=142.21 Aligned_cols=211 Identities=18% Similarity=0.135 Sum_probs=145.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+..++++|||++|+||+.+++.|+++|++|++++|+.++......... ...++..+++|+++++++.++++ .
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 456799999999999999999999999999999998654322222111 11357889999999888776654 3
Q ss_pred ccEEEEcccccccc-----------C------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCC-Cch
Q 047628 77 ANVVINLIGREYET-----------R------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSS-PSR 134 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----------~------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~-~~~ 134 (327)
+|+|||++|..... . ....+++|+.++..+.+++. +...-.+++++||...++.. ...
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~ 162 (253)
T PRK08217 83 LNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMGQTN 162 (253)
T ss_pred CCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCCCCCch
Confidence 69999999863210 0 02355678888776665443 22112468999997766443 378
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
|+.+|.+.|.+++.+ +++++.++|+.+.++... ..+......... .+ ...+.+.+|+|+++..
T Consensus 163 Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~ 233 (253)
T PRK08217 163 YSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKM--IP-------VGRLGEPEEIAHTVRF 233 (253)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhc--CC-------cCCCcCHHHHHHHHHH
Confidence 999999998887653 499999999999866322 122222222211 11 1245678999999999
Q ss_pred HhhcCCCCCCceEEecCCc
Q 047628 207 ALKDDGTSMGKIYELGGPD 225 (327)
Q Consensus 207 ~l~~~~~~~~~~~~v~~~~ 225 (327)
++..... .|++|++.++-
T Consensus 234 l~~~~~~-~g~~~~~~gg~ 251 (253)
T PRK08217 234 IIENDYV-TGRVLEIDGGL 251 (253)
T ss_pred HHcCCCc-CCcEEEeCCCc
Confidence 9976544 78899998853
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1e-17 Score=143.47 Aligned_cols=220 Identities=14% Similarity=0.078 Sum_probs=143.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh----cccC-CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL----KLMG-DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~----~~~~-~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
+++++++||||+|+||.++++.|+++|++|+++.++.+...... .... ...++..+++|+++++++.++++
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 44589999999999999999999999999888876543321111 1111 11357889999999998887765
Q ss_pred ---cccEEEEccccccc-----cC---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEE-ec-cCCCCCCCchHHHhHHH
Q 047628 76 ---KANVVINLIGREYE-----TR---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQI-SC-LGASSSSPSRVFSTKAA 141 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~-----~~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~-Ss-~~v~~~~~~~y~~~K~~ 141 (327)
.+|++||+||.... .+ ....+++|+.++..+++++...- +-.+++++ || .+........|+.+|.+
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~a 165 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAP 165 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHHH
Confidence 47999999997321 11 13467789999999988886531 01355554 33 34444444789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
.|.+.+.. ++++++++||.+..+........ ........ .....+.....+.+.+|+|.++..++......
T Consensus 166 ~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~ 243 (257)
T PRK12744 166 VEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA-EAVAYHKT-AAALSPFSKTGLTDIEDIVPFIRFLVTDGWWI 243 (257)
T ss_pred HHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc-chhhcccc-cccccccccCCCCCHHHHHHHHHHhhccccee
Confidence 99998765 38899999999875421000000 00000000 00011112235788999999999999854322
Q ss_pred CCceEEecCCcc
Q 047628 215 MGKIYELGGPDI 226 (327)
Q Consensus 215 ~~~~~~v~~~~~ 226 (327)
.|+++++.++..
T Consensus 244 ~g~~~~~~gg~~ 255 (257)
T PRK12744 244 TGQTILINGGYT 255 (257)
T ss_pred ecceEeecCCcc
Confidence 588999988643
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.1e-17 Score=141.34 Aligned_cols=216 Identities=19% Similarity=0.070 Sum_probs=142.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
+++++||||+|+||+++++.|+++|++|++++|+.+.......... ...++.++++|+++++++.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999999998755332222211 11357889999999998877665 479
Q ss_pred EEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|||++|...... -...+++|+.++..+++++.. .+.-.++|++||.......+ ..|+.+|...+.
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~ 161 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRG 161 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHH
Confidence 9999998743211 134567888887777766543 22124899999876543333 679999999887
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh--cCce-----eeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK--FNFF-----PLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.. +++++.++||.+..+.. ......... +... .+... .....+...+|+|.++..++..
T Consensus 162 ~~~~la~e~~~~gi~v~~i~Pg~v~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~va~~~~~L~~~ 237 (256)
T PRK08643 162 LTQTAARDLASEGITVNAYAPGIVKTPMM---FDIAHQVGENAGKPDEWGMEQFAKD-ITLGRLSEPEDVANCVSFLAGP 237 (256)
T ss_pred HHHHHHHHhcccCcEEEEEeeCCCcChhh---hHHHhhhccccCCCchHHHHHHhcc-CCCCCCcCHHHHHHHHHHHhCc
Confidence 77653 48899999998875421 111100000 0000 00000 0012356789999999999875
Q ss_pred CCC-CCCceEEecCCcc
Q 047628 211 DGT-SMGKIYELGGPDI 226 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~ 226 (327)
... ..|+.+.+.++..
T Consensus 238 ~~~~~~G~~i~vdgg~~ 254 (256)
T PRK08643 238 DSDYITGQTIIVDGGMV 254 (256)
T ss_pred cccCccCcEEEeCCCee
Confidence 432 2678888877643
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.9e-17 Score=137.40 Aligned_cols=205 Identities=14% Similarity=0.053 Sum_probs=140.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
++++|||||+|.||+++++.|+++|++|++++|+++.....+... ++.++.+|+.+++++.++++ .+|+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 77 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDGLRA 77 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence 578999999999999999999999999999999876543333322 36788999999988876653 3799
Q ss_pred EEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cC-CcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 80 VINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 80 vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+||++|...... -...+++|+.++..+.+++.. .+ +..++|++||.......+ ..|+.+|.+.|.
T Consensus 78 lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~ 157 (236)
T PRK06483 78 IIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDN 157 (236)
T ss_pred EEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHH
Confidence 999998642211 134567788887776665543 21 024799999876543333 689999999999
Q ss_pred HHHhh------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCce
Q 047628 145 AVLRE------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218 (327)
Q Consensus 145 ~~~~~------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 218 (327)
+.+.+ ++++..++||.+.-..... .......... .++ --+...+|+++++..++...-. .|++
T Consensus 158 l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~-~~~~~~~~~~--~~~-------~~~~~~~~va~~~~~l~~~~~~-~G~~ 226 (236)
T PRK06483 158 MTLSFAAKLAPEVKVNSIAPALILFNEGDD-AAYRQKALAK--SLL-------KIEPGEEEIIDLVDYLLTSCYV-TGRS 226 (236)
T ss_pred HHHHHHHHHCCCcEEEEEccCceecCCCCC-HHHHHHHhcc--Ccc-------ccCCCHHHHHHHHHHHhcCCCc-CCcE
Confidence 98764 2788999999874321110 1111111111 111 1134579999999999975444 7888
Q ss_pred EEecCCcc
Q 047628 219 YELGGPDI 226 (327)
Q Consensus 219 ~~v~~~~~ 226 (327)
+.+.++..
T Consensus 227 i~vdgg~~ 234 (236)
T PRK06483 227 LPVDGGRH 234 (236)
T ss_pred EEeCcccc
Confidence 88887643
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-17 Score=141.41 Aligned_cols=210 Identities=19% Similarity=0.150 Sum_probs=145.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|.||++++++|+++|++|++++|+.+.........+ .++.++++|+++++++.++++ .+
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG--ERARFIATDITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 456899999999999999999999999999999998765333222222 358889999999998877765 36
Q ss_pred cEEEEcccccccc----C---cchhHhhhhHHHHHHHHHHHH---cCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 78 NVVINLIGREYET----R---NYSFEDVNHFMAERIAGIAKE---HGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 78 d~vi~~a~~~~~~----~---~~~~~~~n~~~~~~l~~a~~~---~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
|++||++|..... . -...+++|+.++..+++++.. .+ -.++|++||.......+ ..|+.+|...+.+
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~ 160 (261)
T PRK08265 82 DILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARG-GGAIVNFTSISAKFAQTGRWLYPASKAAIRQL 160 (261)
T ss_pred CEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCCCchhHHHHHHHHHH
Confidence 9999999864211 1 134567888888888887653 22 35899999976543322 6899999999888
Q ss_pred HHhh-------CCCeEEEecCeeecCCChhHH----HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRLLN----KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.. ++++.+++||.+..+...... ....... ....+ ...+...+|+|+++..++.....
T Consensus 161 ~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~-~~~~p-------~~r~~~p~dva~~~~~l~s~~~~~ 232 (261)
T PRK08265 161 TRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVA-APFHL-------LGRVGDPEEVAQVVAFLCSDAASF 232 (261)
T ss_pred HHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhh-cccCC-------CCCccCHHHHHHHHHHHcCccccC
Confidence 7653 488999999987643111000 0000000 00001 12345789999999999975432
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..|+.+.+.++.
T Consensus 233 ~tG~~i~vdgg~ 244 (261)
T PRK08265 233 VTGADYAVDGGY 244 (261)
T ss_pred ccCcEEEECCCe
Confidence 268888888863
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.7e-17 Score=139.69 Aligned_cols=211 Identities=18% Similarity=0.092 Sum_probs=143.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++++||||+|.||.+++++|+++|++|++++|++++......... ...++.++.+|+++++++.++++ .
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 445799999999999999999999999999999998765332222111 11357889999999998887765 4
Q ss_pred ccEEEEcccccccc------C---cchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCC-CC--CchHHHhHH
Q 047628 77 ANVVINLIGREYET------R---NYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASS-SS--PSRVFSTKA 140 (327)
Q Consensus 77 ~d~vi~~a~~~~~~------~---~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~-~~--~~~y~~~K~ 140 (327)
+|++||+||..... + -...+++|+.++..++++ +++.+ -.++|++||..... .. ...|+.+|.
T Consensus 84 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK~ 162 (254)
T PRK07478 84 LDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGFPGMAAYAASKA 162 (254)
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCCCCcchhHHHHH
Confidence 79999999864211 1 134678888766666554 44444 46899999975532 22 278999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+.+.. ++.+.+++||.+-.+..... .......... .+ ...+...+|+|+.++.++..
T Consensus 163 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~va~~~~~l~s~ 233 (254)
T PRK07478 163 GLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGL--HA-------LKRMAQPEEIAQAALFLASD 233 (254)
T ss_pred HHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCc
Confidence 998887654 38899999998864411100 1111111111 11 12346789999999998875
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
... ..|+++.+.++.
T Consensus 234 ~~~~~~G~~~~~dgg~ 249 (254)
T PRK07478 234 AASFVTGTALLVDGGV 249 (254)
T ss_pred hhcCCCCCeEEeCCch
Confidence 432 257888887754
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6.1e-17 Score=138.54 Aligned_cols=209 Identities=16% Similarity=0.133 Sum_probs=144.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+++++||||+|.||+++++.|+++|++|.++.|+....... +...+ .++..+.+|+++++++.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG--VRAEIRQLDLSDLPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999998887654332211 11112 368899999999988877664
Q ss_pred cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
.+|+|||++|...... ....+.+|+.++..+++++... ++-.++|++||.......+ ..|+.+|.+
T Consensus 80 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a 159 (256)
T PRK12743 80 RIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHA 159 (256)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHH
Confidence 3799999998743211 1346788999999999877543 1124899999976543332 689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+++.. +++++.++||.+.++..... ........ ...+. ..+.+.+|++.++..++.....
T Consensus 160 ~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~dva~~~~~l~~~~~~ 230 (256)
T PRK12743 160 LGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSR--PGIPL-------GRPGDTHEIASLVAWLCSEGAS 230 (256)
T ss_pred HHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHH--hcCCC-------CCCCCHHHHHHHHHHHhCcccc
Confidence 98887653 48899999999987632211 11111111 11111 1245779999999988875432
Q ss_pred -CCCceEEecCCcc
Q 047628 214 -SMGKIYELGGPDI 226 (327)
Q Consensus 214 -~~~~~~~v~~~~~ 226 (327)
..|+.+.+.++..
T Consensus 231 ~~~G~~~~~dgg~~ 244 (256)
T PRK12743 231 YTTGQSLIVDGGFM 244 (256)
T ss_pred CcCCcEEEECCCcc
Confidence 2578888887643
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=6e-17 Score=138.56 Aligned_cols=210 Identities=15% Similarity=0.183 Sum_probs=147.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
+.+++++||||+|+||++++++|+++|++|+++.|+++.......... ...++.++.+|+++++++.+++++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 446899999999999999999999999999999998654322221111 113588999999999988877653
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||++|...... ....+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|.+.
T Consensus 89 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~ 167 (256)
T PRK06124 89 LDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAGDAVYPAAKQGL 167 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCCccHhHHHHHHH
Confidence 599999998743211 123577888888888866543 45 57899999976543333 7899999998
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++..++|+.+.++..... ..+....... .+ ...+++.+|++++++.++..+.
T Consensus 168 ~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~l~~~~~ 238 (256)
T PRK06124 168 TGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQR--TP-------LGRWGRPEEIAGAAVFLASPAA 238 (256)
T ss_pred HHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHHHcCccc
Confidence 8877653 49999999999987642111 1111112111 11 1246889999999999998764
Q ss_pred C-CCCceEEecCC
Q 047628 213 T-SMGKIYELGGP 224 (327)
Q Consensus 213 ~-~~~~~~~v~~~ 224 (327)
. ..|+.+.+.++
T Consensus 239 ~~~~G~~i~~dgg 251 (256)
T PRK06124 239 SYVNGHVLAVDGG 251 (256)
T ss_pred CCcCCCEEEECCC
Confidence 3 15777777765
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.3e-17 Score=140.33 Aligned_cols=211 Identities=14% Similarity=0.088 Sum_probs=145.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhccc--CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLM--GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
..++++||||+|+||++++++|+++|++|+++.|+.... ...+... ....++.++.+|+++++++.++++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 347899999999999999999999999999887754321 1112111 011357788999999988876654
Q ss_pred cccEEEEccccccc---------cCcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 76 KANVVINLIGREYE---------TRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 76 ~~d~vi~~a~~~~~---------~~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
.+|++||+||.... ......+++|+.++..+++++...- .-.++|++||...+...+ ..|+.+|.+.+
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal~ 207 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAIL 207 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHHH
Confidence 46999999986321 1113567899999999999886531 024899999987765444 68999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++.+++||.+.++.... -......... ..+. ..+...+|+|++++.++.....
T Consensus 208 ~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~--~~~~-------~r~~~pedva~~~~fL~s~~~~ 278 (294)
T PRK07985 208 NYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQ--QTPM-------KRAGQPAELAPVYVYLASQESS 278 (294)
T ss_pred HHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhc--cCCC-------CCCCCHHHHHHHHHhhhChhcC
Confidence 877643 5999999999998763210 0111111111 1111 1345689999999999876432
Q ss_pred -CCCceEEecCCc
Q 047628 214 -SMGKIYELGGPD 225 (327)
Q Consensus 214 -~~~~~~~v~~~~ 225 (327)
..|+++.+.++.
T Consensus 279 ~itG~~i~vdgG~ 291 (294)
T PRK07985 279 YVTAEVHGVCGGE 291 (294)
T ss_pred CccccEEeeCCCe
Confidence 257888888764
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=139.37 Aligned_cols=192 Identities=14% Similarity=0.029 Sum_probs=136.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
+++++||||+|.+|+.++++|+++|++|++++|+++.......... ...++.++.+|+++++++.++++ .+|
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD 85 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998754322211111 11368889999999998877765 379
Q ss_pred EEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|||++|..... .....+++|+.++.++++++ ++.+ ..++|++||...+...+ ..|+.+|...+.
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~ 164 (241)
T PRK07454 86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFPQWGAYCVSKAALAA 164 (241)
T ss_pred EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCCCccHHHHHHHHHHH
Confidence 999999874321 11345677888877776665 4444 56899999987654433 789999999988
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.. +++++++|||.+-.+... ...... ......++..+|+|++++.++..+..
T Consensus 165 ~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~-----------~~~~~~---~~~~~~~~~~~~va~~~~~l~~~~~~ 226 (241)
T PRK07454 165 FTKCLAEEERSHGIRVCTITLGAVNTPLWD-----------TETVQA---DFDRSAMLSPEQVAQTILHLAQLPPS 226 (241)
T ss_pred HHHHHHHHhhhhCCEEEEEecCcccCCccc-----------cccccc---ccccccCCCHHHHHHHHHHHHcCCcc
Confidence 77542 599999999988644210 000000 00012357889999999999987753
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-17 Score=140.14 Aligned_cols=212 Identities=14% Similarity=0.110 Sum_probs=145.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++.++++||||+|.||+++++.|+++|++|+++.|+.+.......... ...++..+.+|+++++++.++++ .
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 446899999999999999999999999999999998654322222111 11357888999999998877664 5
Q ss_pred ccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCC-C-C--CchHHHhHH
Q 047628 77 ANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASS-S-S--PSRVFSTKA 140 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~-~-~--~~~y~~~K~ 140 (327)
+|++||++|...... + ...+++|+.++..+++++.. .+.-.++|++||..... . . ...|+.+|.
T Consensus 87 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKa 166 (253)
T PRK05867 87 IDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKA 166 (253)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHH
Confidence 799999998743211 1 23567899998888887643 22113689998865431 1 1 257999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG- 212 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 212 (327)
+.+.+.+.. ++++..++||.+-.+............... .+. ..+...+|+|++++.++....
T Consensus 167 al~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~~~~~~--~~~-------~r~~~p~~va~~~~~L~s~~~~ 237 (253)
T PRK05867 167 AVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQPLWEPK--IPL-------GRLGRPEELAGLYLYLASEASS 237 (253)
T ss_pred HHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHcCcccC
Confidence 999888764 489999999988654221111111111111 111 235678999999999987533
Q ss_pred CCCCceEEecCCc
Q 047628 213 TSMGKIYELGGPD 225 (327)
Q Consensus 213 ~~~~~~~~v~~~~ 225 (327)
...|+++.+.++.
T Consensus 238 ~~tG~~i~vdgG~ 250 (253)
T PRK05867 238 YMTGSDIVIDGGY 250 (253)
T ss_pred CcCCCeEEECCCc
Confidence 2268888888764
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.2e-17 Score=137.99 Aligned_cols=179 Identities=20% Similarity=0.184 Sum_probs=134.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---ccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---ANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d~v 80 (327)
+.+++++||||||+||+++++.|+++|+ +|++++|+.++... .+ .++.++.+|+.+++++.++++. +|+|
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~v 77 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LG--PRVVPLQLDVTDPASVAAAAEAASDVTIL 77 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cC--CceEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 4457999999999999999999999998 99999998765332 11 3688999999999998887764 7999
Q ss_pred EEccccc-ccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 81 INLIGRE-YET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 81 i~~a~~~-~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
||+++.. ... . ....+++|+.++.++++++. ..+ ..+||++||.......+ ..|+.+|..+|.+
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~ 156 (238)
T PRK08264 78 VNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFPNLGTYSASKAAAWSL 156 (238)
T ss_pred EECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCCCchHhHHHHHHHHHH
Confidence 9999872 211 1 13456788999999988865 344 56899999976654333 6899999999887
Q ss_pred HHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.. +++++++||+.+.++... . . . ...+..+|+++.++..+..+
T Consensus 157 ~~~l~~~~~~~~i~~~~v~pg~v~t~~~~-----------~--~----~----~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 157 TQALRAELAPQGTRVLGVHPGPIDTDMAA-----------G--L----D----APKASPADVARQILDALEAG 208 (238)
T ss_pred HHHHHHHhhhcCeEEEEEeCCcccccccc-----------c--C----C----cCCCCHHHHHHHHHHHHhCC
Confidence 7653 488999999988643110 0 0 0 12577799999999888754
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.2e-17 Score=140.22 Aligned_cols=210 Identities=16% Similarity=0.136 Sum_probs=143.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+..++++||||+|+||++++++|+++|++|++++|+.+.......... ...++.++++|+.+++++..+++ .
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 345799999999999999999999999999999998654322222111 11357889999999988876654 5
Q ss_pred ccEEEEccccccccC-----------------------cchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCC
Q 047628 77 ANVVINLIGREYETR-----------------------NYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASS 129 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~-----------------------~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~ 129 (327)
+|++||++|...... ....+++|+.++..++++ +++.+ ..++|++||...+.
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~ 166 (278)
T PRK08277 88 CDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAFT 166 (278)
T ss_pred CCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcC
Confidence 799999998532110 123567788777655554 44444 46899999987765
Q ss_pred CCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH--------HHHHHHHhhcCceeeecCCCcee
Q 047628 130 SSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL--------NKWAQFVKKFNFFPLFGDGSTRI 192 (327)
Q Consensus 130 ~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 192 (327)
..+ ..|+.+|.+.+.+.+.. ++++.+++||.+..+....+ .......... . ...
T Consensus 167 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~ 237 (278)
T PRK08277 167 PLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH--T-------PMG 237 (278)
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhcc--C-------Ccc
Confidence 443 67999999999888654 48899999999986632110 0000111100 1 112
Q ss_pred cceeHHHHHHHHHHHhhc-CCC-CCCceEEecCC
Q 047628 193 QPVYVVDVAAAVTAALKD-DGT-SMGKIYELGGP 224 (327)
Q Consensus 193 ~~i~~~D~a~~~~~~l~~-~~~-~~~~~~~v~~~ 224 (327)
.+...+|+|++++.++.. ... ..|+.+.+.++
T Consensus 238 r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 238 RFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred CCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 356779999999998876 332 26788888775
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.1e-17 Score=137.69 Aligned_cols=210 Identities=17% Similarity=0.088 Sum_probs=140.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC-CCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC-EDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++.++|||+||+||++++++|+++|++|+++.+.. ......+.... ...++..+.+|+.+.+++.++++ .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 457899999999999999999999999988865432 22221122111 11357778999999988877664 4
Q ss_pred ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC--CCchHHHhHHHH
Q 047628 77 ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS--SPSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~ 142 (327)
+|+|||++|..... .....+++|+.++.++.+++ ++.+ ..++|++||...... ....|+.+|.+.
T Consensus 82 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sK~a~ 160 (246)
T PRK12938 82 IDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAKAGI 160 (246)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCCCChhHHHHHHHH
Confidence 79999999874321 11345678888866655544 4555 679999999754322 237899999988
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
+.+.+.. ++++.+++|+.+.++.... .+.....+... . ....+...+|+++++..++.....
T Consensus 161 ~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~v~~~~~~l~~~~~~~ 231 (246)
T PRK12938 161 HGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVAT--I-------PVRRLGSPDEIGSIVAWLASEESGF 231 (246)
T ss_pred HHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhc--C-------CccCCcCHHHHHHHHHHHcCcccCC
Confidence 8776543 4889999999987653211 12222112111 1 112345689999999988865432
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..|+.+.+.++.
T Consensus 232 ~~g~~~~~~~g~ 243 (246)
T PRK12938 232 STGADFSLNGGL 243 (246)
T ss_pred ccCcEEEECCcc
Confidence 267888887753
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.7e-17 Score=141.10 Aligned_cols=191 Identities=19% Similarity=-0.025 Sum_probs=133.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--------ccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--------KAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--------~~d 78 (327)
|+++|||||||+||++++++|+++|++|++++|+.+.......... ..++.++++|+++.+++.++++ .+|
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG-AGNAWTGALDVTDRAAWDAALADFAAATGGRLD 79 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc-CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence 3689999999999999999999999999999998765332222111 1368899999999998887664 359
Q ss_pred EEEEcccccccc--------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC--CCchHHHhHHHHHH
Q 047628 79 VVINLIGREYET--------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS--SPSRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E~ 144 (327)
+|||+||..... .....+++|+.++.++++++. ..+ ..++|++||...... ....|+.+|...+.
T Consensus 80 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~ 158 (260)
T PRK08267 80 VLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPGLAVYSATKFAVRG 158 (260)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence 999999974321 113567889999999988774 333 468999999654322 23789999999888
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChh-HH-HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRL-LN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+.+.. ++++++++|+.+-.+.... .. ....... .....+..+|+|++++.+++.+
T Consensus 159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~------------~~~~~~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDAGSTK------------RLGVRLTPEDVAEAVWAAVQHP 222 (260)
T ss_pred HHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhhhhHh------------hccCCCCHHHHHHHHHHHHhCC
Confidence 77654 4899999999876431110 00 0000000 0111356699999999999754
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.2e-17 Score=130.63 Aligned_cols=199 Identities=18% Similarity=0.140 Sum_probs=142.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh-------cccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM-------AKAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-------~~~d 78 (327)
..+.++|||||+-||.++++.|.+.|++|++..|+.++......+.++ ..+.++..|++|.+++.+++ ..+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 357899999999999999999999999999999998876554444432 36889999999998866554 3589
Q ss_pred EEEEccccccccC-----c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
++||+||.....+ . ..++++|+.|..+..++.. +.+ -.++|.+||.......| +.|+.+|+.+..
T Consensus 84 iLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~ 162 (246)
T COG4221 84 ILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPGGAVYGATKAAVRA 162 (246)
T ss_pred EEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCCCccchhhHHHHHH
Confidence 9999999864421 1 3578999998888877653 443 34999999987655555 789999999877
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.... +++++.+-||.+-...-..+.. .....+...+. ....++..+|+|+.+..+++.|.+
T Consensus 163 fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~-~g~~~~~~~~y------~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 163 FSLGLRQELAGTGIRVTVISPGLVETTEFSTVRF-EGDDERADKVY------KGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred HHHHHHHHhcCCCeeEEEecCceecceecccccC-CchhhhHHHHh------ccCCCCCHHHHHHHHHHHHhCCCc
Confidence 76543 3899999999884321100000 00000000000 124568889999999999998875
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=1e-16 Score=135.55 Aligned_cols=208 Identities=13% Similarity=0.149 Sum_probs=140.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---ccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---ANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d~vi 81 (327)
+++++|+||||+|.||+++++.|+++|++|+++.|+.......+... .++..+.+|+++.+++.+.++. +|++|
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~li 80 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE---TGATAVQTDSADRDAVIDVVRKSGALDILV 80 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH---hCCeEEecCCCCHHHHHHHHHHhCCCcEEE
Confidence 44689999999999999999999999999988776433222222111 1356788999999888777653 79999
Q ss_pred EccccccccC--------cchhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccCCC-CC--CCchHHHhHHHHHHHHHhh
Q 047628 82 NLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGAS-SS--SPSRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 82 ~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~v~-~~--~~~~y~~~K~~~E~~~~~~ 149 (327)
|++|...... ....+++|+.++..++..+... .+..++|++||.... .. ....|+.+|.+.|.+++..
T Consensus 81 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~l 160 (237)
T PRK12742 81 VNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGL 160 (237)
T ss_pred ECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHH
Confidence 9998743211 1346788999988887665543 113589999997653 22 2278999999999888653
Q ss_pred -------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEe
Q 047628 150 -------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYEL 221 (327)
Q Consensus 150 -------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v 221 (327)
++++.+++||.+..+.............. ..+. ..+.+.+|+++++..++..... ..|..+.+
T Consensus 161 a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~--~~~~-------~~~~~p~~~a~~~~~l~s~~~~~~~G~~~~~ 231 (237)
T PRK12742 161 ARDFGPRGITINVVQPGPIDTDANPANGPMKDMMHS--FMAI-------KRHGRPEEVAGMVAWLAGPEASFVTGAMHTI 231 (237)
T ss_pred HHHHhhhCeEEEEEecCcccCCccccccHHHHHHHh--cCCC-------CCCCCHHHHHHHHHHHcCcccCcccCCEEEe
Confidence 48999999998865422111111111111 1111 1346789999999998875432 25778877
Q ss_pred cCC
Q 047628 222 GGP 224 (327)
Q Consensus 222 ~~~ 224 (327)
.++
T Consensus 232 dgg 234 (237)
T PRK12742 232 DGA 234 (237)
T ss_pred CCC
Confidence 765
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.7e-17 Score=140.58 Aligned_cols=211 Identities=15% Similarity=0.102 Sum_probs=145.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC-CCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD-LGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
+.+++++||||+|.||++++++|+++|++|+++.|+.++.......... ..++..+++|+++++++.++++.
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4467899999999999999999999999999998887654332222211 13588899999999988877743
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCC-CC-CCchHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGAS-SS-SPSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~-~~-~~~~y~~~K~~~ 142 (327)
+|+|||++|..... + ....+++|+.++..+.+++. +.+ ..++|++||.... .. ....|+.+|.+.
T Consensus 88 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaal 166 (265)
T PRK07097 88 IDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRETVSAYAAAKGGL 166 (265)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCCCCccHHHHHHHH
Confidence 79999999975321 1 13456788888777766654 344 5689999986443 22 237899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHH---------HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLN---------KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+.+.+.+ ++.+..++||.+..+...... .+...+... .+ ...+...+|+|+.+..
T Consensus 167 ~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~ 237 (265)
T PRK07097 167 KMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAK--TP-------AARWGDPEDLAGPAVF 237 (265)
T ss_pred HHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhc--CC-------ccCCcCHHHHHHHHHH
Confidence 9888765 499999999999765321110 011111100 01 1235567999999999
Q ss_pred HhhcCCC-CCCceEEecCCc
Q 047628 207 ALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~ 225 (327)
++..... ..|+.+.+.++.
T Consensus 238 l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 238 LASDASNFVNGHILYVDGGI 257 (265)
T ss_pred HhCcccCCCCCCEEEECCCc
Confidence 9986432 257778887754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.3e-17 Score=142.27 Aligned_cols=193 Identities=16% Similarity=0.077 Sum_probs=133.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
|+++||||||+||++++++|+++|++|++++|+.+......... ....++.++++|+.+++++.++++ ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999999999999876543322211 112468889999999988877664 5799
Q ss_pred EEEccccccccC----c----chhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 80 VINLIGREYETR----N----YSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 80 vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
|||++|...... . ...+++|+.++.++.++ +++.+ ..++|++||.......+ ..|+.+|.+.+.+
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~ 159 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL 159 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence 999999743211 1 22456787766665555 45665 67999999976543333 7899999987666
Q ss_pred HHhh-------CCCeEEEecCeeecCCChh----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRL----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.. ++++++++|+.+..+.... ......... ......+++++|+|+.++.+++++
T Consensus 160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVG----------KLLEKSPITAADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHH----------HHhhcCCCCHHHHHHHHHHHHhCC
Confidence 5432 4889999999997653211 111111110 000124578999999999999854
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.6e-17 Score=139.50 Aligned_cols=212 Identities=16% Similarity=0.088 Sum_probs=139.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc-ccC---CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LMG---DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~~---~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++||||+|+||+++++.|+++|++|++++|+.......+. ... ....+..+++|+++++++.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999998432222111 111 01124567899999998877664 46
Q ss_pred cEEEEccccccccC-----c---chhHhhhhH----HHHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR-----N---YSFEDVNHF----MAERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----~---~~~~~~n~~----~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||++|...... . ...+++|+. ++..+++++++.+ .++||++||.......+ ..|+.+|...+
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~ 159 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPDYTAYNASKAAVA 159 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCCCchhHHHHHHHH
Confidence 99999998753211 1 234567776 7788888888776 78999999987654333 68999999998
Q ss_pred HHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.+.. ++++..++|+.+.++....... ...................+.+.+|++.+++.++.....
T Consensus 160 ~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~ 236 (251)
T PRK07069 160 SLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQ---RLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRF 236 (251)
T ss_pred HHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhh---hccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccC
Confidence 887643 2678999999888664221100 000000000000111112346789999999988765432
Q ss_pred CCCceEEecCC
Q 047628 214 SMGKIYELGGP 224 (327)
Q Consensus 214 ~~~~~~~v~~~ 224 (327)
..|+.+.+.++
T Consensus 237 ~~g~~i~~~~g 247 (251)
T PRK07069 237 VTGAELVIDGG 247 (251)
T ss_pred ccCCEEEECCC
Confidence 25667666654
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.3e-17 Score=138.04 Aligned_cols=188 Identities=15% Similarity=0.137 Sum_probs=132.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCC-chhhhcccC--CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCED-DPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~-~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+.++|+||||+|.||++++++|+++| ++|++++|+++. .....+... ...+++++++|++|++++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 45789999999999999999999995 999999998775 322222111 11268899999999887655443
Q ss_pred cccEEEEcccccccc-----Cc---chhHhhhhHHHHH----HHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYET-----RN---YSFEDVNHFMAER----IAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~----l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|++||++|..... .. .+.+++|+.++.. +++++++.+ ..++|++||.......+ ..|+.+|.+
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~~~~~~Y~~sKaa 165 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVRRSNFVYGSTKAG 165 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCCCCcchHHHHHH
Confidence 589999999874321 11 1246888876665 566677766 67999999976533222 579999998
Q ss_pred HHHHHHh-------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 142 AEEAVLR-------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 142 ~E~~~~~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
...+.+. .++++++++||.+..+ .. . ... . ....+..+|+|+.++.++.++..
T Consensus 166 ~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~---~~----~---~~~--~-------~~~~~~~~~~A~~i~~~~~~~~~ 225 (253)
T PRK07904 166 LDGFYLGLGEALREYGVRVLVVRPGQVRTR---MS----A---HAK--E-------APLTVDKEDVAKLAVTAVAKGKE 225 (253)
T ss_pred HHHHHHHHHHHHhhcCCEEEEEeeCceecc---hh----c---cCC--C-------CCCCCCHHHHHHHHHHHHHcCCC
Confidence 8755433 3599999999998732 11 0 000 0 01246889999999999987653
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.1e-17 Score=138.70 Aligned_cols=208 Identities=13% Similarity=0.128 Sum_probs=144.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh---hhcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~---~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+..+++|||||+|.||.+++++|++.|++|+++.|+ +.... .+...+ .++.++++|+++++++.++++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~ 89 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEG--RKVTFVQVDLTKPESAEKVVKEALEEF 89 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999999999999997 32111 121112 358899999999998887775
Q ss_pred -cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 -KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
.+|++||++|..... . -...+++|+.++..+.+++. +.+ ..++|++||.......+ ..|+.+|.
T Consensus 90 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~ 168 (258)
T PRK06935 90 GKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKFVPAYTASKH 168 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCCCchhhHHHHH
Confidence 479999999874321 1 12456788888777776554 444 46899999987654333 68999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+.+.. ++++.+++||.+..+..... ........ ...+ ...+...+|++..+..++..
T Consensus 169 a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~dva~~~~~l~s~ 239 (258)
T PRK06935 169 GVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEIL--KRIP-------AGRWGEPDDLMGAAVFLASR 239 (258)
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHH--hcCC-------CCCCCCHHHHHHHHHHHcCh
Confidence 998887654 48999999998875432111 00001111 0111 12456779999999988875
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
... ..|+++.+.++.
T Consensus 240 ~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 240 ASDYVNGHILAVDGGW 255 (258)
T ss_pred hhcCCCCCEEEECCCe
Confidence 432 267888888763
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=7.8e-17 Score=138.34 Aligned_cols=220 Identities=13% Similarity=0.066 Sum_probs=145.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~------~ 76 (327)
++.++++||||+|.||+++++.|+++|++|++++|+.++......... ...++.++.+|+++++++.++++ .
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 456889999999999999999999999999999998655322222111 01358899999999998887775 3
Q ss_pred ccEEEEcccccccc-----Cc---chhHhhhhHHHHHHH----HHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----RN---YSFEDVNHFMAERIA----GIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~----~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||++|..... +. ...+++|+.+...+. ..+++.+ ..++|++||.......| ..|+.+|.+.
T Consensus 86 iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~~~~~y~asKaal 164 (263)
T PRK08339 86 PDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIPNIALSNVVRISM 164 (263)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCCcchhhHHHHHHH
Confidence 79999999864321 11 235677766555544 4445555 56899999987654444 5699999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHH-HHhhc-----CceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQ-FVKKF-----NFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+.+.+.. ++++..+.||.+-.+ ....+.. ..... ..............+...+|+|++++.++.
T Consensus 165 ~~l~~~la~el~~~gIrVn~v~PG~v~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s 241 (263)
T PRK08339 165 AGLVRTLAKELGPKGITVNGIMPGIIRTD---RVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLAS 241 (263)
T ss_pred HHHHHHHHHHhcccCeEEEEEEeCcCccH---HHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhc
Confidence 8877654 488999999988533 1111100 00000 000000000011235678999999999887
Q ss_pred cCCC-CCCceEEecCCcccc
Q 047628 210 DDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~~~s 228 (327)
.... ..|+.+.+.++...|
T Consensus 242 ~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 242 DLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred chhcCccCceEEECCCcccc
Confidence 5432 267888888876554
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=5.7e-17 Score=137.61 Aligned_cols=187 Identities=13% Similarity=0.058 Sum_probs=135.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCChhHHHHHhcc----ccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRDDNTIKATMAK----ANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~~----~d~v 80 (327)
||+++||||||+||.++++.|+++|++|++++|++++........ ....+++++++|+++++++.++++. +|.|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 468999999999999999999999999999999876533222211 0113688999999999988877654 5999
Q ss_pred EEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHHHHHHH
Q 047628 81 INLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAAAEEAV 146 (327)
Q Consensus 81 i~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E~~~ 146 (327)
||++|...... ....+++|+.++.++++++.. .+ ..++|++||....... ...|+.+|...+.+.
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~ 159 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRASNYVYGSAKAALTAFL 159 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCCCCcccHHHHHHHHHHH
Confidence 99998643211 124578899998888887654 34 5789999997543222 267999999988877
Q ss_pred Hhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.. ++++.+++|+.+.++.. . . ...+ ....+..+|+++.+++.++++.
T Consensus 160 ~~l~~el~~~gi~v~~v~pg~v~t~~~-------~----~--~~~~-----~~~~~~~~~~a~~i~~~~~~~~ 214 (243)
T PRK07102 160 SGLRNRLFKSGVHVLTVKPGFVRTPMT-------A----G--LKLP-----GPLTAQPEEVAKDIFRAIEKGK 214 (243)
T ss_pred HHHHHHhhccCcEEEEEecCcccChhh-------h----c--cCCC-----ccccCCHHHHHHHHHHHHhCCC
Confidence 654 48899999998875411 0 0 1110 1234678999999999888553
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.6e-17 Score=137.85 Aligned_cols=210 Identities=16% Similarity=0.103 Sum_probs=140.9
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
..+++++|+||||+|+||.+++++|+++|++|++++|+........... ...++++|+++++++.++++
T Consensus 3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06057 3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV----GGLFVPTDVTDEDAVNALFDTAAETYG 78 (255)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc----CCcEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 3456789999999999999999999999999999999765432222222 13578999999998887775
Q ss_pred cccEEEEcccccccc-C---------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccC-CCCC--CCchHHHh
Q 047628 76 KANVVINLIGREYET-R---------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLG-ASSS--SPSRVFST 138 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-~---------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~-v~~~--~~~~y~~~ 138 (327)
.+|+|||++|..... . ....+++|+.++..+++.+. +.+ ..++|++||.. +... ....|+.+
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~~~~~Y~~s 157 (255)
T PRK06057 79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSATSQISYTAS 157 (255)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCCCCcchHHH
Confidence 469999999864221 1 13456788888777766653 344 45889888853 4432 23679999
Q ss_pred HHHHHHHHHh-------hCCCeEEEecCeeecCCCh-hHHHHHHHHhh-cCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 139 KAAAEEAVLR-------ELPWATIMRPAAMIGTEDR-LLNKWAQFVKK-FNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 139 K~~~E~~~~~-------~~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
|.+.+.+.+. .++++++++||.+.++... ....-.....+ ....+ ...+.+++|+++++..++.
T Consensus 158 Kaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~a~~~~~l~~ 230 (255)
T PRK06057 158 KGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVP-------MGRFAEPEEIAAAVAFLAS 230 (255)
T ss_pred HHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCC-------CCCCcCHHHHHHHHHHHhC
Confidence 9877666553 2599999999999765321 11000000000 00111 1256889999999988886
Q ss_pred cCCC-CCCceEEecCC
Q 047628 210 DDGT-SMGKIYELGGP 224 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~ 224 (327)
.... ..|+.+.+.++
T Consensus 231 ~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 231 DDASFITASTFLVDGG 246 (255)
T ss_pred ccccCccCcEEEECCC
Confidence 5432 25778888765
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.3e-17 Score=140.70 Aligned_cols=213 Identities=15% Similarity=0.105 Sum_probs=142.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++++++|||||+|.||+++++.|+++|++|+++.|+ +.......... ...++..+.+|+++++++.++++ .
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999999999998 43322222211 11358899999999988877664 3
Q ss_pred ccEEEEcccccccc-----Cc----chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCC--CchHHHhHHH
Q 047628 77 ANVVINLIGREYET-----RN----YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSS--PSRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~~----~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~ 141 (327)
+|++||+||..... .+ ...+++|+.++..+++++. +.+ .++|++||....... ...|+.+|.+
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asKaa 160 (272)
T PRK08589 83 VDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQAADLYRSGYNAAKGA 160 (272)
T ss_pred cCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcCCCCCCchHHHHHHH
Confidence 69999999874321 11 2355678877776666543 333 489999997665433 3789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH-H----HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL-N----KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.+.+.. ++++..+.||.+..+..... . .............. + ...+...+|+|++++.++.
T Consensus 161 l~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~va~~~~~l~s 235 (272)
T PRK08589 161 VINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMT---P--LGRLGKPEEVAKLVVFLAS 235 (272)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccC---C--CCCCcCHHHHHHHHHHHcC
Confidence 99888764 48999999998864421110 0 00000000000000 1 1134678999999999887
Q ss_pred cCCC-CCCceEEecCCc
Q 047628 210 DDGT-SMGKIYELGGPD 225 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~ 225 (327)
.... ..|+.+.+.++.
T Consensus 236 ~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 236 DDSSFITGETIRIDGGV 252 (272)
T ss_pred chhcCcCCCEEEECCCc
Confidence 5432 267788888764
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-16 Score=136.81 Aligned_cols=212 Identities=19% Similarity=0.156 Sum_probs=141.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC-CCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc--------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------- 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------- 75 (327)
++++++||||+|+||++++++|++.|++|.+..+ +.+......... ....++..+.+|+.+.+++..+++
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 4589999999999999999999999999988754 333222111111 011346788999998776654331
Q ss_pred -----cccEEEEcccccccc----Cc----chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -----KANVVINLIGREYET----RN----YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -----~~d~vi~~a~~~~~~----~~----~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+||..... .+ ...+++|+.++..+++++...- +..++|++||.......+ ..|+.+|
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK 162 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTK 162 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHH
Confidence 589999999964221 11 3456799999999998776532 124899999987654433 6899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHH-HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+++.+.+.. ++++.++.||.+.++... ... ........ . . .+ ...+.+.+|+|.++..++..
T Consensus 163 aa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~-~-~----~~--~~~~~~~~dva~~~~~l~s~ 234 (252)
T PRK12747 163 GAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYAT-T-I----SA--FNRLGEVEDIADTAAFLASP 234 (252)
T ss_pred HHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHH-h-c----Cc--ccCCCCHHHHHHHHHHHcCc
Confidence 9999887653 489999999999765321 110 00000000 0 0 01 12467889999999998875
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
... ..|+.+.+.++.
T Consensus 235 ~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 235 DSRWVTGQLIDVSGGS 250 (252)
T ss_pred cccCcCCcEEEecCCc
Confidence 432 257888887753
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.9e-17 Score=139.70 Aligned_cols=212 Identities=19% Similarity=0.163 Sum_probs=144.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
+++++++||||+|.||++++++|+++|++|++++|+++.......... ...++.++.+|+++++++.+++++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 345799999999999999999999999999999998654322211111 113567889999999988877653
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHc--CCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEH--GGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~--~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|+|||+++..... + ....+++|+.++.++++++... .+-.++|++||.......+ ..|+.+|.+.|.
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~ 166 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDM 166 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHHHH
Confidence 69999999753211 1 1235678999999999887642 1024899999976543333 689999999999
Q ss_pred HHHhh-------CCCeEEEecCeeecCCC--hhHH--HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTED--RLLN--KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.. ++.+..++|+.+.+... ...+ ....... ...+ ...+...+|+|++++.++.....
T Consensus 167 l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~dva~~~~~l~~~~~~ 237 (264)
T PRK07576 167 LTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVA--QSVP-------LKRNGTKQDIANAALFLASDMAS 237 (264)
T ss_pred HHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHH--hcCC-------CCCCCCHHHHHHHHHHHcChhhc
Confidence 88764 37889999998764311 0000 0001111 1111 12356789999999999975432
Q ss_pred -CCCceEEecCCc
Q 047628 214 -SMGKIYELGGPD 225 (327)
Q Consensus 214 -~~~~~~~v~~~~ 225 (327)
..|+.+.+.++.
T Consensus 238 ~~~G~~~~~~gg~ 250 (264)
T PRK07576 238 YITGVVLPVDGGW 250 (264)
T ss_pred CccCCEEEECCCc
Confidence 257777777754
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.4e-17 Score=136.00 Aligned_cols=184 Identities=17% Similarity=0.109 Sum_probs=135.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc----ccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK----ANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----~d~vi~~ 83 (327)
++++||||||+||++++++|+++|++|++++|+++.... +.... .++.++.+|+++++++.++++. .|.+||+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~-~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE-LHTQS--ANIFTLAFDVTDHPGTKAALSQLPFIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHhc--CCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEc
Confidence 689999999999999999999999999999998654322 22111 3588899999999999988865 4889999
Q ss_pred ccccccc-----Cc---chhHhhhhHHHHHHHHHHHHc--CCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHh---
Q 047628 84 IGREYET-----RN---YSFEDVNHFMAERIAGIAKEH--GGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLR--- 148 (327)
Q Consensus 84 a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~--~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~--- 148 (327)
+|..... +. ...+++|+.++.++++++... . -.++|++||.......+ ..|+.+|..++.+.+.
T Consensus 79 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~ 157 (240)
T PRK06101 79 AGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC-GHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQL 157 (240)
T ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHH
Confidence 8753211 11 246789999999999998753 2 24788888865433233 6899999999988754
Q ss_pred ----hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 149 ----ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 149 ----~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.++++++++||.+.++.... ..... ...+..+|+|+.++..++.+..
T Consensus 158 e~~~~gi~v~~v~pg~i~t~~~~~-----------~~~~~-------~~~~~~~~~a~~i~~~i~~~~~ 208 (240)
T PRK06101 158 DLRPKGIEVVTVFPGFVATPLTDK-----------NTFAM-------PMIITVEQASQEIRAQLARGKS 208 (240)
T ss_pred HHHhcCceEEEEeCCcCCCCCcCC-----------CCCCC-------CcccCHHHHHHHHHHHHhcCCC
Confidence 35899999999998653211 00100 1136789999999999987653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-17 Score=139.94 Aligned_cols=210 Identities=13% Similarity=0.077 Sum_probs=143.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++++||||+|+||+++++.|+++|++|++++|+... ....... ....++.++.+|+.+++++.++++ .
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 446899999999999999999999999999999997642 1111111 111357889999999998887765 4
Q ss_pred ccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCC-CC--CCchHHHhHHH
Q 047628 77 ANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGAS-SS--SPSRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~-~~--~~~~y~~~K~~ 141 (327)
+|+|||++|...... + ...+++|+.++.++++++.. .+ ..++|++||.... .. ....|+.+|..
T Consensus 83 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~sK~a 161 (263)
T PRK08226 83 IDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVADPGETAYALTKAA 161 (263)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCCCCcchHHHHHHH
Confidence 699999999743211 1 23577899999888887653 33 4689999886542 22 23689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH---------HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL---------NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.|.+.+.. ++++..++||.+.++....+ ......+.+. .+ ...+...+|+|+++.
T Consensus 162 ~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~~~~~~~~va~~~~ 232 (263)
T PRK08226 162 IVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKA--IP-------LRRLADPLEVGELAA 232 (263)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhcc--CC-------CCCCCCHHHHHHHHH
Confidence 98887654 48899999998875421100 1111111111 11 123467899999998
Q ss_pred HHhhcCC-CCCCceEEecCCc
Q 047628 206 AALKDDG-TSMGKIYELGGPD 225 (327)
Q Consensus 206 ~~l~~~~-~~~~~~~~v~~~~ 225 (327)
.++.... ...|+.+.+.++.
T Consensus 233 ~l~~~~~~~~~g~~i~~dgg~ 253 (263)
T PRK08226 233 FLASDESSYLTGTQNVIDGGS 253 (263)
T ss_pred HHcCchhcCCcCceEeECCCc
Confidence 8876432 2267777787753
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-16 Score=135.03 Aligned_cols=211 Identities=13% Similarity=0.110 Sum_probs=143.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
+..++++||||+|.||++++++|++.|++|++++|+.+.. ........ ...++..+.+|+.+++++.++++.
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999999999999999999999999999976532 11111111 113578889999999988877653
Q ss_pred -ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCC----CchHHHhH
Q 047628 77 -ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSS----PSRVFSTK 139 (327)
Q Consensus 77 -~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~----~~~y~~~K 139 (327)
+|++||++|..... + -...+++|+.++..+++++ ++.+ ..++|++||....... ...|+.+|
T Consensus 86 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~sK 164 (254)
T PRK06114 86 ALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQAHYNASK 164 (254)
T ss_pred CCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCCcchHHHHH
Confidence 59999999974321 1 1345678888887776665 3344 4689999986543211 26799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.+.. ++++.+++||.+..+... .......... ...+. ..+...+|++..++.++.+
T Consensus 165 aa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~--~~~p~-------~r~~~~~dva~~~~~l~s~ 235 (254)
T PRK06114 165 AGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFE--EQTPM-------QRMAKVDEMVGPAVFLLSD 235 (254)
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHH--hcCCC-------CCCcCHHHHHHHHHHHcCc
Confidence 9988887654 489999999988765321 1111111111 11111 1345679999999998875
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
... ..|+++.+.++.
T Consensus 236 ~~~~~tG~~i~~dgg~ 251 (254)
T PRK06114 236 AASFCTGVDLLVDGGF 251 (254)
T ss_pred cccCcCCceEEECcCE
Confidence 432 267888888753
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9e-17 Score=139.99 Aligned_cols=190 Identities=17% Similarity=0.121 Sum_probs=134.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+..++++||||+|.||+++++.|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++ .
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999999999999998654322211110 11357789999999998887776 5
Q ss_pred ccEEEEccccccccC----------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCC-CCC--chHHHhH
Q 047628 77 ANVVINLIGREYETR----------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASS-SSP--SRVFSTK 139 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~----------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~-~~~--~~y~~~K 139 (327)
+|+|||+||...... ....+++|+.++.++++++ ++.+ ..++|++||.++.. ..| ..|+.+|
T Consensus 118 id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~p~~~~Y~asK 196 (293)
T PRK05866 118 VDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEASPLFSVYNASK 196 (293)
T ss_pred CCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCCcchHHHHH
Confidence 899999998743211 1235678888877777654 3555 57999999976543 233 6799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.+.+.+.. ++.+++++||.+-.+.. . .. ... . ....+..+++|+.++.+++++.
T Consensus 197 aal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~---~-------~~--~~~--~---~~~~~~pe~vA~~~~~~~~~~~ 259 (293)
T PRK05866 197 AALSAVSRVIETEWGDRGVHSTTLYYPLVATPMI---A-------PT--KAY--D---GLPALTADEAAEWMVTAARTRP 259 (293)
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEEcCcccCccc---c-------cc--ccc--c---CCCCCCHHHHHHHHHHHHhcCC
Confidence 9998876653 48899999996643211 0 00 000 0 1224678999999999998653
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=135.69 Aligned_cols=211 Identities=18% Similarity=0.123 Sum_probs=143.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
.++.++++||||+|+||.+++++|+++|++|++++|+............ ...++..+++|+.+.+++.++++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG 84 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3456899999999999999999999999999999997654322222111 11357788999999988876654
Q ss_pred cccEEEEccccccc------cCc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 KANVVINLIGREYE------TRN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ~~d~vi~~a~~~~~------~~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
.+|++||+++.... .+. ...+++|+.++..+++++ ++.+ ..+++++||.......+ ..|+.+|.
T Consensus 85 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 163 (252)
T PRK07035 85 RLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGIYSITKA 163 (252)
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCCCCcchHHHHH
Confidence 37999999985321 111 246778888888777766 4444 56899999865433222 68999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh-hH--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR-LL--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
++|.+++.. ++++..+.||.+..+... .. ......... ..+ ...+...+|+|+.++.++..
T Consensus 164 al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~va~~~~~l~~~ 234 (252)
T PRK07035 164 AVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALA--HIP-------LRRHAEPSEMAGAVLYLASD 234 (252)
T ss_pred HHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHc--cCC-------CCCcCCHHHHHHHHHHHhCc
Confidence 999988764 488999999988543111 10 111111111 111 12355779999999998876
Q ss_pred CCC-CCCceEEecCC
Q 047628 211 DGT-SMGKIYELGGP 224 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~ 224 (327)
... ..|+++.+.++
T Consensus 235 ~~~~~~g~~~~~dgg 249 (252)
T PRK07035 235 ASSYTTGECLNVDGG 249 (252)
T ss_pred cccCccCCEEEeCCC
Confidence 542 25778888764
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.74 E-value=2e-17 Score=125.98 Aligned_cols=154 Identities=21% Similarity=0.287 Sum_probs=132.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|.+|..+|+||||.+|+.+++.+++++ .+|+++.|+....+..- ..+.....|....+++...+++.|+.|.
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~------k~v~q~~vDf~Kl~~~a~~~qg~dV~Fc 89 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATD------KVVAQVEVDFSKLSQLATNEQGPDVLFC 89 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcccc------ceeeeEEechHHHHHHHhhhcCCceEEE
Confidence 557899999999999999999999997 58999999853322111 3577778898888999999999999999
Q ss_pred ccccccccC-cchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhC-CCeEEEecCe
Q 047628 83 LIGREYETR-NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLREL-PWATIMRPAA 160 (327)
Q Consensus 83 ~a~~~~~~~-~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~-~~~~i~r~~~ 160 (327)
|.|.+.... .+.++.++-+....++++|++.| +++|+.+||.+++.++...|...|..+|+-+.+.. -.++|+|||.
T Consensus 90 aLgTTRgkaGadgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~sSrFlY~k~KGEvE~~v~eL~F~~~~i~RPG~ 168 (238)
T KOG4039|consen 90 ALGTTRGKAGADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADPSSRFLYMKMKGEVERDVIELDFKHIIILRPGP 168 (238)
T ss_pred eecccccccccCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCcccceeeeeccchhhhhhhhccccEEEEecCcc
Confidence 988875533 45677888888899999999999 99999999999999999999999999999999987 7789999999
Q ss_pred eecCC
Q 047628 161 MIGTE 165 (327)
Q Consensus 161 ~~G~~ 165 (327)
+.|..
T Consensus 169 ll~~R 173 (238)
T KOG4039|consen 169 LLGER 173 (238)
T ss_pred eeccc
Confidence 99874
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.2e-16 Score=141.65 Aligned_cols=203 Identities=15% Similarity=0.084 Sum_probs=138.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.+++|+||||||.||++++++|+++|++|++++|+.+......... ....++.++.+|++|++++.++++ .
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 44678999999999999999999999999999999865432222111 011467889999999998887754 4
Q ss_pred ccEEEEcccccccc-----Cc---chhHhhhhHHHHH----HHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----RN---YSFEDVNHFMAER----IAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~----l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+++..... +. ...+++|+.++.+ +++.+++.+ ..+||++||...+...| ..|+.+|...
T Consensus 86 iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asK~a~ 164 (334)
T PRK07109 86 IDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIPLQSAYCAAKHAI 164 (334)
T ss_pred CCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCCcchHHHHHHHHH
Confidence 79999999864221 11 2355666655544 555555555 56899999987765544 6899999988
Q ss_pred HHHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.+.. ++.+++++|+.+..+. ........ .. .......+...+|+|++++.+++++.
T Consensus 165 ~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~---~~~~~~~~---~~-----~~~~~~~~~~pe~vA~~i~~~~~~~~- 232 (334)
T PRK07109 165 RGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQ---FDWARSRL---PV-----EPQPVPPIYQPEVVADAILYAAEHPR- 232 (334)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEeCCCccCch---hhhhhhhc---cc-----cccCCCCCCCHHHHHHHHHHHHhCCC-
Confidence 7765432 3889999999886442 11111000 00 01111245678999999999998663
Q ss_pred CCCceEEecC
Q 047628 214 SMGKIYELGG 223 (327)
Q Consensus 214 ~~~~~~~v~~ 223 (327)
+.+.+++
T Consensus 233 ---~~~~vg~ 239 (334)
T PRK07109 233 ---RELWVGG 239 (334)
T ss_pred ---cEEEeCc
Confidence 3566665
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.1e-17 Score=139.88 Aligned_cols=212 Identities=16% Similarity=0.119 Sum_probs=148.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++.++++||||+|.||+++++.|+++|++ |+++.|+.++........ ....++.++.+|+++++++.++++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG 83 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 45689999999999999999999999998 999999865432211111 011357788999999998887764
Q ss_pred cccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|+|||+++..... .. ...+++|+.++.++++++... +...++|++||.......+ ..|+.+|..
T Consensus 84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a 163 (260)
T PRK06198 84 RLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGA 163 (260)
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHH
Confidence 479999999874321 11 235788999999988877542 1124799999987654443 689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH--------HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL--------NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
.|.+.+.. ++.++.++|+.+.++..... ..+....... . ....+++.+|+++++..
T Consensus 164 ~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~a~~~~~ 234 (260)
T PRK06198 164 LATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAAT--Q-------PFGRLLDPDEVARAVAF 234 (260)
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhcc--C-------CccCCcCHHHHHHHHHH
Confidence 99887753 37889999999987643211 1111111100 1 12346789999999999
Q ss_pred HhhcCCC-CCCceEEecCCc
Q 047628 207 ALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~ 225 (327)
++..... ..|+.+.+.++.
T Consensus 235 l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 235 LLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred HcChhhCCccCceEeECCcc
Confidence 8865432 258888888753
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=136.67 Aligned_cols=210 Identities=16% Similarity=0.117 Sum_probs=145.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc---cCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---MGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+.+++++||||+|.||+++++.|+++|++|++++|+.+........ .....++..+.+|+.+++++.++++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4468999999999999999999999999999999986553322211 1111367888999999988766554
Q ss_pred -cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 -KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
.+|+|||++|..... .....+.+|+.++.++++++. +.+ ..++|++||.......+ ..|+.+|.
T Consensus 87 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~ 165 (257)
T PRK09242 87 DGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVRSGAPYGMTKA 165 (257)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCCCCcchHHHHH
Confidence 469999999863211 113467888999888888764 344 56899999976654333 67999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh-hH--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR-LL--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
..+.+++.. ++++..++||.+..+... .. ...........++ ..+...+|++.++..++..
T Consensus 166 a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~~~l~~~ 236 (257)
T PRK09242 166 ALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM---------RRVGEPEEVAAAVAFLCMP 236 (257)
T ss_pred HHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC---------CCCcCHHHHHHHHHHHhCc
Confidence 999887753 489999999998765321 11 1111111111111 1234569999999998875
Q ss_pred CCC-CCCceEEecCC
Q 047628 211 DGT-SMGKIYELGGP 224 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~ 224 (327)
... ..|+.+.+.++
T Consensus 237 ~~~~~~g~~i~~~gg 251 (257)
T PRK09242 237 AASYITGQCIAVDGG 251 (257)
T ss_pred ccccccCCEEEECCC
Confidence 432 14778888764
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.9e-17 Score=136.54 Aligned_cols=209 Identities=15% Similarity=0.103 Sum_probs=136.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC-CCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC-EDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++|+||||+|+||+.+++.|+++|++|.++.++. +.......... ...++..+++|+++++++.++++ .+
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999988765433 32221111111 11368899999999988876653 47
Q ss_pred cEEEEcccccccc------Cc---chhHhhhhHHHHHHHHHHHH-cC-----CcceEEEEeccCCC-CCC--CchHHHhH
Q 047628 78 NVVINLIGREYET------RN---YSFEDVNHFMAERIAGIAKE-HG-----GIMRFIQISCLGAS-SSS--PSRVFSTK 139 (327)
Q Consensus 78 d~vi~~a~~~~~~------~~---~~~~~~n~~~~~~l~~a~~~-~~-----~v~~~v~~Ss~~v~-~~~--~~~y~~~K 139 (327)
|+|||++|..... .. ...+++|+.++..+++++.. .. .-.+||++||.... ... ...|+.+|
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK 161 (248)
T PRK06947 82 DALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK 161 (248)
T ss_pred CEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence 9999999864221 11 23477888888888764432 21 01259999986543 322 24799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
...+.+.+.. ++++++++||.+..+.... .+....... ...+. -.+...+|+++.++.++.+
T Consensus 162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~e~va~~~~~l~~~ 232 (248)
T PRK06947 162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLG--AQTPL-------GRAGEADEVAETIVWLLSD 232 (248)
T ss_pred HHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHh--hcCCC-------CCCcCHHHHHHHHHHHcCc
Confidence 9998776543 4899999999987652110 111111111 11111 1235779999999999886
Q ss_pred CCC-CCCceEEecCC
Q 047628 211 DGT-SMGKIYELGGP 224 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~ 224 (327)
... ..|+.+.+.++
T Consensus 233 ~~~~~~G~~~~~~gg 247 (248)
T PRK06947 233 AASYVTGALLDVGGG 247 (248)
T ss_pred cccCcCCceEeeCCC
Confidence 542 25777777654
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.3e-16 Score=136.64 Aligned_cols=211 Identities=18% Similarity=0.106 Sum_probs=144.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.+++|+||||+|+||+++++.|+++|++|+++.|+.+......... ....++..+.+|+++++++.++++ .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 44689999999999999999999999999999999876532222111 111357889999999998887765 4
Q ss_pred ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cC-------CcceEEEEeccCCCCCC--CchH
Q 047628 77 ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HG-------GIMRFIQISCLGASSSS--PSRV 135 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~-------~v~~~v~~Ss~~v~~~~--~~~y 135 (327)
+|++||+++..... .....+++|+.++.++++++.. .. ...++|++||....... ...|
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y 166 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLY 166 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHH
Confidence 79999999863221 1234567888888888887652 11 01489999997665333 3789
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+.+|.+.+.+.+.. ++++++++||.+.++.... .......+. +..+ ...+...+|+++++..
T Consensus 167 ~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~--~~~~-------~~~~~~p~~~~~~~~~ 237 (258)
T PRK06949 167 CMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLV--SMLP-------RKRVGKPEDLDGLLLL 237 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHH--hcCC-------CCCCcCHHHHHHHHHH
Confidence 99999988887653 4899999999998764321 111111111 1111 1234556999999999
Q ss_pred HhhcCC-CCCCceEEecCC
Q 047628 207 ALKDDG-TSMGKIYELGGP 224 (327)
Q Consensus 207 ~l~~~~-~~~~~~~~v~~~ 224 (327)
++.... ...|+...+.++
T Consensus 238 l~~~~~~~~~G~~i~~dgg 256 (258)
T PRK06949 238 LAADESQFINGAIISADDG 256 (258)
T ss_pred HhChhhcCCCCcEEEeCCC
Confidence 887543 225666666653
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.8e-16 Score=133.88 Aligned_cols=204 Identities=13% Similarity=0.030 Sum_probs=142.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh-hHHHHHhccccEEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTIKATMAKANVVIN 82 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~d~vi~ 82 (327)
.++.++++||||+|+||+++++.|+++|++|++++|+..... ..++..+.+|++++ +.+.+.+..+|+|||
T Consensus 2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~id~lv~ 73 (235)
T PRK06550 2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------SGNFHFLQLDLSDDLEPLFDWVPSVDILCN 73 (235)
T ss_pred CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------CCcEEEEECChHHHHHHHHHhhCCCCEEEE
Confidence 355689999999999999999999999999999999764421 13578899999887 555555567899999
Q ss_pred ccccccc-----c-C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHH
Q 047628 83 LIGREYE-----T-R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVL 147 (327)
Q Consensus 83 ~a~~~~~-----~-~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~ 147 (327)
++|.... . . ....+++|+.++.++++++.. .+ -.++|++||.......+ ..|+.+|...+.+.+
T Consensus 74 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~ 152 (235)
T PRK06550 74 TAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGGGGAAYTASKHALAGFTK 152 (235)
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcccHHHHHHHHHHHH
Confidence 9985321 1 1 134678899999999888753 33 35899999976543333 679999999888765
Q ss_pred hh-------CCCeEEEecCeeecCCCh--hH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CCCC
Q 047628 148 RE-------LPWATIMRPAAMIGTEDR--LL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TSMG 216 (327)
Q Consensus 148 ~~-------~~~~~i~r~~~~~G~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~ 216 (327)
.. ++++++++||.+..+... +. ..+....... .+ ...+...+|+|++++.++.... ...|
T Consensus 153 ~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~~a~~~~~l~s~~~~~~~g 223 (235)
T PRK06550 153 QLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARE--TP-------IKRWAEPEEVAELTLFLASGKADYMQG 223 (235)
T ss_pred HHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhcc--CC-------cCCCCCHHHHHHHHHHHcChhhccCCC
Confidence 42 489999999998765321 11 1111111111 11 1235677999999999986543 2257
Q ss_pred ceEEecCCc
Q 047628 217 KIYELGGPD 225 (327)
Q Consensus 217 ~~~~v~~~~ 225 (327)
+++.+.++.
T Consensus 224 ~~~~~~gg~ 232 (235)
T PRK06550 224 TIVPIDGGW 232 (235)
T ss_pred cEEEECCce
Confidence 788887753
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=136.27 Aligned_cols=186 Identities=15% Similarity=0.060 Sum_probs=133.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++||||+|+||++++++|+++|++|++++|++++...... ......++.++++|+++++++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4789999999999999999999999999999998755322211 11112368889999999988876654 4
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCC---CchHHHhHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSS---PSRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~---~~~y~~~K~~ 141 (327)
+|+|||++|...... ....+++|+.++.++++++. +.+ ..++|++||....... ...|+.+|.+
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a 160 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPGVKAAYAASKAG 160 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCCCcccHHHHHHH
Confidence 799999998743211 12456788888888887764 445 6789999996543222 2679999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.+.+.. ++++++++||.+.++... ..+. ....++.+|.|+.++++++++.
T Consensus 161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~----------~~~~---------~~~~~~~~~~a~~i~~~~~~~~ 219 (248)
T PRK08251 161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNA----------KAKS---------TPFMVDTETGVKALVKAIEKEP 219 (248)
T ss_pred HHHHHHHHHHHhcccCcEEEEEecCcCcchhhh----------cccc---------CCccCCHHHHHHHHHHHHhcCC
Confidence 88777543 378899999988643110 0000 1235778999999999998654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.6e-16 Score=135.49 Aligned_cols=209 Identities=13% Similarity=0.096 Sum_probs=143.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++.++++||||+|.||++++++|+++|++|+++.|+.... ...+...+ .++.++.+|+++++++.++++ .
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 83 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALG--RKFHFITADLIQQKDIDSIVSQAVEVMGH 83 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 4468999999999999999999999999999998864321 11222222 358889999999998887765 3
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||..... + -...+++|+.++..+.+++.. .+.-.++|++||.......+ ..|+.+|.+.
T Consensus 84 iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~ 163 (251)
T PRK12481 84 IDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAV 163 (251)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHH
Confidence 79999999874321 1 134677898888888776643 22124899999976554333 6899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++..++||.+-.+....+ ......... ..+. ..+...+|+|+++..++....
T Consensus 164 ~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~p~-------~~~~~peeva~~~~~L~s~~~ 234 (251)
T PRK12481 164 MGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILE--RIPA-------SRWGTPDDLAGPAIFLSSSAS 234 (251)
T ss_pred HHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHh--cCCC-------CCCcCHHHHHHHHHHHhCccc
Confidence 8887643 58999999998864321111 011111111 1111 135678999999999987533
Q ss_pred C-CCCceEEecCC
Q 047628 213 T-SMGKIYELGGP 224 (327)
Q Consensus 213 ~-~~~~~~~v~~~ 224 (327)
. ..|+.+.+.++
T Consensus 235 ~~~~G~~i~vdgg 247 (251)
T PRK12481 235 DYVTGYTLAVDGG 247 (251)
T ss_pred cCcCCceEEECCC
Confidence 2 26778888765
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.2e-17 Score=134.74 Aligned_cols=197 Identities=18% Similarity=0.132 Sum_probs=142.1
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCeeEEeeCCCChhHHHHHhc------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
.+++++++|||||+-||..+++.|.++|++|+++.|+.++.....+++.+ ..+++++.+|+++++++.++.+
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 35568999999999999999999999999999999998876544433321 1357899999999998887664
Q ss_pred -cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 -KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
.+|++||+||..... ...+.+++|+.+...|..+ +.+.+ -.++|.++|.......| ..|+.+|.
T Consensus 83 ~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~~avY~ATKa 161 (265)
T COG0300 83 GPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPYMAVYSATKA 161 (265)
T ss_pred CcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcchHHHHHHHH
Confidence 489999999984321 2246788888765555554 44555 45899999998876666 78999998
Q ss_pred HHHHHH-------HhhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 141 AAEEAV-------LRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 141 ~~E~~~-------~~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+-.+. +..++.++.+.||.+.- .+.. . ....... .....-++..+|+|+..+..+++...
T Consensus 162 ~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T---~f~~--~---~~~~~~~----~~~~~~~~~~~~va~~~~~~l~~~k~ 229 (265)
T COG0300 162 FVLSFSEALREELKGTGVKVTAVCPGPTRT---EFFD--A---KGSDVYL----LSPGELVLSPEDVAEAALKALEKGKR 229 (265)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEecCcccc---cccc--c---ccccccc----ccchhhccCHHHHHHHHHHHHhcCCc
Confidence 764443 33459999999998762 2211 0 1011111 01135678899999999999997654
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=134.31 Aligned_cols=208 Identities=19% Similarity=0.110 Sum_probs=138.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC-chhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
+.+|||||+|+||+++++.|+++|++|+++.|+... ......... ...++.++.+|+.+++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 479999999999999999999999999999883222 111111111 11358899999999988876664 379
Q ss_pred EEEEcccccccc--------CcchhHhhhhHHHHHHHH----HHHHcCCcceEEEEeccCCCCC--CCchHHHhHHHHHH
Q 047628 79 VVINLIGREYET--------RNYSFEDVNHFMAERIAG----IAKEHGGIMRFIQISCLGASSS--SPSRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~----a~~~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E~ 144 (327)
+|||++|..... .....+.+|+.++..+++ .+++.+ ..++|++||...... ....|+.+|...+.
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~ 159 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQFGQTNYSAAKAGMIG 159 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence 999999864321 113355778887666544 445555 679999999654322 23679999998877
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SM 215 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~ 215 (327)
+++.. ++++..++|+.+.++.... .+......... .+. ..+...+|+++++..++.++.. ..
T Consensus 160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~~a~~~~~l~~~~~~~~~ 230 (242)
T TIGR01829 160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQ--IPV-------GRLGRPEEIAAAVAFLASEEAGYIT 230 (242)
T ss_pred HHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHcCchhcCcc
Confidence 66543 4899999999988663221 12222222211 111 1234568999999887765431 26
Q ss_pred CceEEecCCc
Q 047628 216 GKIYELGGPD 225 (327)
Q Consensus 216 ~~~~~v~~~~ 225 (327)
|+.+.+.++.
T Consensus 231 G~~~~~~gg~ 240 (242)
T TIGR01829 231 GATLSINGGL 240 (242)
T ss_pred CCEEEecCCc
Confidence 8889888864
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=4e-16 Score=133.48 Aligned_cols=207 Identities=16% Similarity=0.109 Sum_probs=142.1
Q ss_pred ccCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCc-----------h---hhhcccCCCCCeeEEeeCCCCh
Q 047628 4 VYSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDD-----------P---RHLKLMGDLGQIVPMKFNPRDD 67 (327)
Q Consensus 4 ~~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~-----------~---~~~~~~~~~~~v~~~~~Dl~~~ 67 (327)
.+++++|+|||||| .||.+++++|+++|++|+++.|++.+. . ..+...+ .+++++.+|++++
T Consensus 2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~ 79 (256)
T PRK12748 2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYG--VRCEHMEIDLSQP 79 (256)
T ss_pred CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcC--CeEEEEECCCCCH
Confidence 34567899999996 699999999999999999999873211 0 1111111 3588999999999
Q ss_pred hHHHHHhc-------cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCC
Q 047628 68 NTIKATMA-------KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGAS 128 (327)
Q Consensus 68 ~~~~~~~~-------~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~ 128 (327)
+++..+++ .+|+|||++|...... ....+++|+.++..+++++... + ..++|++||....
T Consensus 80 ~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~ 158 (256)
T PRK12748 80 YAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQSL 158 (256)
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCcccc
Confidence 88776654 3699999998742211 1345789999999999987643 2 3589999997665
Q ss_pred CCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 129 SSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 129 ~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
...+ ..|+.+|.+.|.+++.. +++++.++||.+..+... ........ ...+ ...+...+|
T Consensus 159 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~--~~~~~~~~--~~~~-------~~~~~~~~~ 227 (256)
T PRK12748 159 GPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWIT--EELKHHLV--PKFP-------QGRVGEPVD 227 (256)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCC--hhHHHhhh--ccCC-------CCCCcCHHH
Confidence 4333 68999999999987653 489999999987643211 11111111 0011 012345699
Q ss_pred HHHHHHHHhhcCCC-CCCceEEecCC
Q 047628 200 VAAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 200 ~a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
+|+.+..++..... ..|+++++.++
T Consensus 228 ~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 228 AARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred HHHHHHHHhCcccccccCCEEEecCC
Confidence 99999988876432 15788888765
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2e-16 Score=133.83 Aligned_cols=207 Identities=16% Similarity=0.121 Sum_probs=139.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.++|+||||+|+||+++++.|+++|++|++++|+++.............+++++++|+++++++.++++ ++
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 44679999999999999999999999999999999875432221221111357889999999988877654 35
Q ss_pred cEEEEccccccccC------cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCC-CCCCC--chHHHhHHHHHHHHH
Q 047628 78 NVVINLIGREYETR------NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGA-SSSSP--SRVFSTKAAAEEAVL 147 (327)
Q Consensus 78 d~vi~~a~~~~~~~------~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v-~~~~~--~~y~~~K~~~E~~~~ 147 (327)
|.+||+++...... ....++.|+.+...+++.+...- +-.++|++||... ....+ ..|+.+|...+.+++
T Consensus 83 d~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~ 162 (238)
T PRK05786 83 DGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVE 162 (238)
T ss_pred CEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHH
Confidence 99999997532211 12345677777777777665431 0147888888754 22222 679999998876654
Q ss_pred h-------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceE
Q 047628 148 R-------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIY 219 (327)
Q Consensus 148 ~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~ 219 (327)
. .+++++++||+.++++.... ..+ .. ... ....++..+|+++++..++..+.. ..|+.+
T Consensus 163 ~~~~~~~~~gi~v~~i~pg~v~~~~~~~-~~~----~~---~~~-----~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~ 229 (238)
T PRK05786 163 ILASELLGRGIRVNGIAPTTISGDFEPE-RNW----KK---LRK-----LGDDMAPPEDFAKVIIWLLTDEADWVDGVVI 229 (238)
T ss_pred HHHHHHhhcCeEEEEEecCccCCCCCch-hhh----hh---hcc-----ccCCCCCHHHHHHHHHHHhcccccCccCCEE
Confidence 3 25999999999999763211 000 00 100 012356779999999999976442 256777
Q ss_pred EecCC
Q 047628 220 ELGGP 224 (327)
Q Consensus 220 ~v~~~ 224 (327)
.+.++
T Consensus 230 ~~~~~ 234 (238)
T PRK05786 230 PVDGG 234 (238)
T ss_pred EECCc
Confidence 77654
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.4e-16 Score=136.83 Aligned_cols=195 Identities=15% Similarity=0.040 Sum_probs=135.5
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc------cc
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------KA 77 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~ 77 (327)
.+++++++||||+|+||.+++++|+++|++|++++|+.+.............++.++.+|++|++++.++++ .+
T Consensus 2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 81 (263)
T PRK09072 2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGI 81 (263)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCC
Confidence 345689999999999999999999999999999999865533222221112468899999999988876654 47
Q ss_pred cEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC--CCchHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS--SPSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E 143 (327)
|+|||++|..... + ....+++|+.++.++++++.. .+ ..++|++||...... ....|+.+|.+.+
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 160 (263)
T PRK09072 82 NVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYPGYASYCASKFALR 160 (263)
T ss_pred CEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCCCccHHHHHHHHHH
Confidence 9999999874321 1 134667899999988888754 33 357888888644322 2368999999987
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+++.. ++.+..+.||.+..+... . .. ..... .........+|+|+.++.+++++.
T Consensus 161 ~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~---~----~~-~~~~~-----~~~~~~~~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 161 GFSEALRRELADTGVRVLYLAPRATRTAMNS---E----AV-QALNR-----ALGNAMDDPEDVAAAVLQAIEKER 223 (263)
T ss_pred HHHHHHHHHhcccCcEEEEEecCcccccchh---h----hc-ccccc-----cccCCCCCHHHHHHHHHHHHhCCC
Confidence 776543 378888999877543211 0 00 00000 001235678999999999999764
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.3e-17 Score=141.86 Aligned_cols=197 Identities=18% Similarity=0.109 Sum_probs=133.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++|+||||||+||++++++|+++|++|++++|+.++........ .++.++.+|++|.+++.++++ ++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l---~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~i 100 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI---DGVEVVMLDLADLESVRAFAERFLDSGRRI 100 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---hhCeEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 34578999999999999999999999999999999866533322222 247889999999998877663 47
Q ss_pred cEEEEcccccccc---C---cchhHhhhhHHHHHHHH----HHHHcCCcceEEEEeccCCCC------------C-CC-c
Q 047628 78 NVVINLIGREYET---R---NYSFEDVNHFMAERIAG----IAKEHGGIMRFIQISCLGASS------------S-SP-S 133 (327)
Q Consensus 78 d~vi~~a~~~~~~---~---~~~~~~~n~~~~~~l~~----a~~~~~~v~~~v~~Ss~~v~~------------~-~~-~ 133 (327)
|+|||+||..... . -+..+++|+.++..+.+ .+++.+ ..++|++||.+... . .+ .
T Consensus 101 D~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~ 179 (315)
T PRK06196 101 DILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTRGYDKWL 179 (315)
T ss_pred CEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccCCCChHH
Confidence 9999999974321 1 13456788888655555 455554 46999999964321 0 11 5
Q ss_pred hHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHH--H--HHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 134 RVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKW--A--QFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 134 ~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
.|+.+|.+.+.+.+.. ++++++++||.+.++....+... . ..+... ..++ . ..+...+|.|.
T Consensus 180 ~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~-~-----~~~~~~~~~a~ 252 (315)
T PRK06196 180 AYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEH-GNPI-D-----PGFKTPAQGAA 252 (315)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhh-hhhh-h-----hhcCCHhHHHH
Confidence 7999999988876543 49999999999987642211100 0 000000 0010 0 02356799999
Q ss_pred HHHHHhhcCC
Q 047628 203 AVTAALKDDG 212 (327)
Q Consensus 203 ~~~~~l~~~~ 212 (327)
.++.++..+.
T Consensus 253 ~~~~l~~~~~ 262 (315)
T PRK06196 253 TQVWAATSPQ 262 (315)
T ss_pred HHHHHhcCCc
Confidence 9999887544
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=9.4e-17 Score=138.78 Aligned_cols=152 Identities=15% Similarity=0.124 Sum_probs=114.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
|+++|||||+|+||+++++.|+++|++|++++|+.+.... +.. .+++++.+|+.+++++.++++ ++|+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 3689999999999999999999999999999998654322 211 246788999999988877663 4799
Q ss_pred EEEccccccccC--------cchhHhhhhHHHHHHHHHHHH---cCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 80 VINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE---HGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 80 vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~---~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
|||++|...... ....+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|.+.+.+.
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~ 154 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALS 154 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCCCCccHHHHHHHHHHHHH
Confidence 999998643211 134677899998888887643 23 35789999865443333 78999999988876
Q ss_pred Hh-------hCCCeEEEecCeeecC
Q 047628 147 LR-------ELPWATIMRPAAMIGT 164 (327)
Q Consensus 147 ~~-------~~~~~~i~r~~~~~G~ 164 (327)
+. .++++++++||.+..+
T Consensus 155 ~~l~~e~~~~gi~v~~v~pg~v~t~ 179 (274)
T PRK05693 155 DALRLELAPFGVQVMEVQPGAIASQ 179 (274)
T ss_pred HHHHHHhhhhCeEEEEEecCccccc
Confidence 44 3599999999988643
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.1e-16 Score=136.00 Aligned_cols=204 Identities=16% Similarity=0.084 Sum_probs=142.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|+||+++++.|+++|++|.+++|+...... .++..+.+|+++++++.++++ .+
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH--------ENYQFVPTDVSSAEEVNHTVAEIIEKFGRI 78 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 446899999999999999999999999999999988755321 257889999999998887665 36
Q ss_pred cEEEEcccccccc--------------Cc---chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--ch
Q 047628 78 NVVINLIGREYET--------------RN---YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SR 134 (327)
Q Consensus 78 d~vi~~a~~~~~~--------------~~---~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~ 134 (327)
|+|||+||..... .. ...+++|+.++..+++++... + -.++|++||.......+ ..
T Consensus 79 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~ 157 (266)
T PRK06171 79 DGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSEGQSC 157 (266)
T ss_pred CEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCCch
Confidence 9999999863211 11 236778999999988887643 2 34799999976654333 78
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeec-C-CChhHH------------HHHHHHhhcCceeeecCCCceec
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIG-T-EDRLLN------------KWAQFVKKFNFFPLFGDGSTRIQ 193 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G-~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 193 (327)
|+.+|.+.+.+.+.. ++++.+++||.+.. + ...... .+.....+....+ ...
T Consensus 158 Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r 230 (266)
T PRK06171 158 YAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIP-------LGR 230 (266)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhccccccc-------CCC
Confidence 999999999887654 48899999998741 1 111110 0000011000111 123
Q ss_pred ceeHHHHHHHHHHHhhcCCC-CCCceEEecCC
Q 047628 194 PVYVVDVAAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
+...+|+|.++..++..... ..|++.++.++
T Consensus 231 ~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 231 SGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred CCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 56779999999998875442 26788888775
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=139.19 Aligned_cols=210 Identities=20% Similarity=0.162 Sum_probs=140.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh-hHHHHHhcc----ccE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTIKATMAK----ANV 79 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~----~d~ 79 (327)
+++++|+|+||||.+|+-+++.|+++|+.|+++.|+.++....+...........+..|...+ +.+...... ..+
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~ 156 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVI 156 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcccccee
Confidence 446799999999999999999999999999999999887655544111123455555555443 333333322 345
Q ss_pred EEEccccccccC-cchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC--c------hHHHhHHHHHHHHHhhC
Q 047628 80 VINLIGREYETR-NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP--S------RVFSTKAAAEEAVLREL 150 (327)
Q Consensus 80 vi~~a~~~~~~~-~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~------~y~~~K~~~E~~~~~~~ 150 (327)
++-|++-.+... -..-+.++..++.|+++||+.+| ++|++++|+++.....+ + .+..+|..+|+++++.+
T Consensus 157 v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~~e~~~~~Sg 235 (411)
T KOG1203|consen 157 VIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLKAEKFLQDSG 235 (411)
T ss_pred EEecccCCCCcccCCCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCCCchhhhhhhhhhHHHHhHHHHHHhcC
Confidence 555555433321 12345678899999999999999 99999999998754332 3 34489999999999999
Q ss_pred CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC-ceEEec
Q 047628 151 PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG-KIYELG 222 (327)
Q Consensus 151 ~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~-~~~~v~ 222 (327)
++++|+|++...-........ ... ...... ..+..--.+...|+|+.++.++.+... .+ .+..+.
T Consensus 236 l~ytiIR~g~~~~~~~~~~~~---~~~-~~~~~~--~~~~~~~~i~r~~vael~~~all~~~~-~~~k~~~~v 301 (411)
T KOG1203|consen 236 LPYTIIRPGGLEQDTGGQREV---VVD-DEKELL--TVDGGAYSISRLDVAELVAKALLNEAA-TFKKVVELV 301 (411)
T ss_pred CCcEEEeccccccCCCCccee---ccc-Cccccc--cccccceeeehhhHHHHHHHHHhhhhh-ccceeEEee
Confidence 999999999776322111110 011 111111 122222467889999999999998776 44 343333
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.5e-16 Score=132.85 Aligned_cols=214 Identities=14% Similarity=0.067 Sum_probs=140.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
.++.++++||||+|.||++++++|+++|++|++++|++++...... ......++..+.+|+++++++.++++
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEAR 84 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 3556899999999999999999999999999999998765432221 11111357788999999998876654
Q ss_pred --cccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+||..... +. ...+++|+.+...+.++ +++.+ ..++|++||.......+ ..|+.+|
T Consensus 85 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~asK 163 (265)
T PRK07062 85 FGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEPHMVATSAAR 163 (265)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCCCchHhHHHH
Confidence 469999999864221 11 23456676655555544 44444 46899999976654333 6799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHH----------HHHHHHhhcCceeeecCCCceecceeHHHHH
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLN----------KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 201 (327)
.+.+.+.+.. ++++..++||.+-.+... .+. .+..........+ ...+...+|+|
T Consensus 164 aal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~p~~va 236 (265)
T PRK07062 164 AGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP-------LGRLGRPDEAA 236 (265)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCC-------cCCCCCHHHHH
Confidence 9887776542 489999999988643210 000 0000000001111 12356779999
Q ss_pred HHHHHHhhcCC-CCCCceEEecCCc
Q 047628 202 AAVTAALKDDG-TSMGKIYELGGPD 225 (327)
Q Consensus 202 ~~~~~~l~~~~-~~~~~~~~v~~~~ 225 (327)
.+++.++.... ...|+++.+.++.
T Consensus 237 ~~~~~L~s~~~~~~tG~~i~vdgg~ 261 (265)
T PRK07062 237 RALFFLASPLSSYTTGSHIDVSGGF 261 (265)
T ss_pred HHHHHHhCchhcccccceEEEcCce
Confidence 99999887533 2268888888763
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-16 Score=135.31 Aligned_cols=210 Identities=13% Similarity=0.003 Sum_probs=143.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.++++||||+|.||++++++|+++|++|++++|+.+.........+ .++.++++|+++++++.++++ .+
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 81 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG--DHVLVVEGDVTSYADNQRAVDQTVDAFGKL 81 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 446899999999999999999999999999999998655332222222 357889999999988877664 47
Q ss_pred cEEEEccccccc-----c-Cc-------chhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 78 NVVINLIGREYE-----T-RN-------YSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~-----~-~~-------~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
|++||++|.... . .. ...+++|+.++..+++++...- +-.++|++||.......+ ..|+.+|.
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~ 161 (263)
T PRK06200 82 DCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKH 161 (263)
T ss_pred CEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHH
Confidence 999999996421 1 11 1245778888888888775321 024799999976653333 57999999
Q ss_pred HHHHHHHhhC------CCeEEEecCeeecCCChh------------HHHHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 141 AAEEAVLREL------PWATIMRPAAMIGTEDRL------------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 141 ~~E~~~~~~~------~~~~i~r~~~~~G~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
+.+.+.+... +++..+.||.+..+-... .+....... ...+ ...+...+|+|.
T Consensus 162 a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-------~~r~~~~~eva~ 232 (263)
T PRK06200 162 AVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIA--AITP-------LQFAPQPEDHTG 232 (263)
T ss_pred HHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhh--cCCC-------CCCCCCHHHHhh
Confidence 9998887642 788899999886431100 000001111 0111 124567899999
Q ss_pred HHHHHhhcC-CC-CCCceEEecCCc
Q 047628 203 AVTAALKDD-GT-SMGKIYELGGPD 225 (327)
Q Consensus 203 ~~~~~l~~~-~~-~~~~~~~v~~~~ 225 (327)
+++.++... .. ..|+.+.+.++.
T Consensus 233 ~~~fl~s~~~~~~itG~~i~vdgG~ 257 (263)
T PRK06200 233 PYVLLASRRNSRALTGVVINADGGL 257 (263)
T ss_pred hhhheecccccCcccceEEEEcCce
Confidence 999988755 32 267888887763
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.3e-16 Score=138.27 Aligned_cols=200 Identities=17% Similarity=0.093 Sum_probs=138.1
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
.+.+.+++++||||||.||+++++.|+++|++|+++.|+.+.......... ...++.++.+|++|++++.++++
T Consensus 2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~ 81 (330)
T PRK06139 2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF 81 (330)
T ss_pred CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence 344556899999999999999999999999999999998765432222110 11357788999999998887763
Q ss_pred --cccEEEEccccccccC----c----chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+||...... + ...+++|+.++.++.+++ ++.+ ..++|++||.......| ..|+.+|
T Consensus 82 ~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p~~~~Y~asK 160 (330)
T PRK06139 82 GGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQPYAAAYSASK 160 (330)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCCCchhHHHHH
Confidence 4799999998643211 1 246788988888877765 3444 35899999876654444 6899999
Q ss_pred HHHHHHHHhh--------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 140 AAAEEAVLRE--------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 140 ~~~E~~~~~~--------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+.+.+.. ++.++.+.|+.+..+.......+ . .... .....+.+.+|+|++++.+++++
T Consensus 161 aal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~----~-~~~~------~~~~~~~~pe~vA~~il~~~~~~ 229 (330)
T PRK06139 161 FGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY----T-GRRL------TPPPPVYDPRRVAKAVVRLADRP 229 (330)
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc----c-cccc------cCCCCCCCHHHHHHHHHHHHhCC
Confidence 9866555432 47889999998876532110000 0 0000 11123578899999999999876
Q ss_pred CC
Q 047628 212 GT 213 (327)
Q Consensus 212 ~~ 213 (327)
..
T Consensus 230 ~~ 231 (330)
T PRK06139 230 RA 231 (330)
T ss_pred CC
Confidence 53
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-16 Score=132.61 Aligned_cols=209 Identities=16% Similarity=0.076 Sum_probs=132.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccc----------
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA---------- 77 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~---------- 77 (327)
++++||||+|+||++++++|+++|++|++++|++.+....+... ...+++++.+|+++++++.++++.+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQ-YNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhc-cCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 68999999999999999999999999999999863322222111 1136888999999999888777532
Q ss_pred -cEEEEcccccccc-----Cc----chhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 78 -NVVINLIGREYET-----RN----YSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 78 -d~vi~~a~~~~~~-----~~----~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
+++||++|..... .. ...+++|+.+...+++. +++.+...++|++||.......+ ..|+.+|.+
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa 160 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAG 160 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHH
Confidence 1788998864221 11 23456677765555544 44432135899999976654433 689999999
Q ss_pred HHHHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeee---cCCCceecceeHHHHHHHHHHHhh
Q 047628 142 AEEAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF---GDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 142 ~E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.|.+.+.+ ++++..++||.+-.+. ..... ... ...+... ........+...+|+|+.++.++.
T Consensus 161 ~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~---~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~ 235 (251)
T PRK06924 161 LDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNM---QAQIR-SSS-KEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLE 235 (251)
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEecCCccccHh---HHHHH-hcC-cccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHh
Confidence 99987643 3778888998775321 11000 000 0000000 000001135788999999999998
Q ss_pred cCCCCCCceEEec
Q 047628 210 DDGTSMGKIYELG 222 (327)
Q Consensus 210 ~~~~~~~~~~~v~ 222 (327)
.+....|+.+.+.
T Consensus 236 ~~~~~~G~~~~v~ 248 (251)
T PRK06924 236 TEDFPNGEVIDID 248 (251)
T ss_pred cccCCCCCEeehh
Confidence 7433256666554
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.7e-16 Score=137.23 Aligned_cols=159 Identities=16% Similarity=0.085 Sum_probs=113.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh---cccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL---KLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+.+++|+||||+|+||++++++|+++|++|+++.|+.++..... .......++.++++|+.+.+++.++++
T Consensus 14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 34579999999999999999999999999999999865432221 111111357889999999998877664
Q ss_pred -cccEEEEcccccccc------CcchhHhhhhHH----HHHHHHHHHHcCCcceEEEEeccCCCC--C------------
Q 047628 76 -KANVVINLIGREYET------RNYSFEDVNHFM----AERIAGIAKEHGGIMRFIQISCLGASS--S------------ 130 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~------~~~~~~~~n~~~----~~~l~~a~~~~~~v~~~v~~Ss~~v~~--~------------ 130 (327)
++|+|||+||..... ..+..+++|+.+ +..+++.+++.+ ..++|++||..... .
T Consensus 94 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~~~~ 172 (306)
T PRK06197 94 PRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQWERRY 172 (306)
T ss_pred CCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCcccCC
Confidence 479999999874321 113467888888 666666676665 57999999965321 0
Q ss_pred -CCchHHHhHHHHHHHHHhh-------CCCeE--EEecCeeecC
Q 047628 131 -SPSRVFSTKAAAEEAVLRE-------LPWAT--IMRPAAMIGT 164 (327)
Q Consensus 131 -~~~~y~~~K~~~E~~~~~~-------~~~~~--i~r~~~~~G~ 164 (327)
....|+.+|.+.+.+.+.. ++++. .+.||.+..+
T Consensus 173 ~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCc
Confidence 1157999999998887653 24444 4479988644
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.6e-16 Score=150.24 Aligned_cols=221 Identities=19% Similarity=0.161 Sum_probs=143.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc---CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM---GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+......... ....++..+++|+++++++.++++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 34689999999999999999999999999999999865432221111 111246788999999999888775
Q ss_pred -cccEEEEccccccccC----c----chhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCC--CchHHHhHH
Q 047628 76 -KANVVINLIGREYETR----N----YSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSS--PSRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~ 140 (327)
++|+|||+||...... + ...+++|+.+...+.+. +++.+.-.++|++||....... ...|+.+|.
T Consensus 492 g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKa 571 (676)
T TIGR02632 492 GGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKA 571 (676)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHH
Confidence 5799999999743211 1 23456677766655543 3343312489999996543333 378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeee-cCCChhHHHH-HHHHhh-c-Cc---eeeecCCCceecceeHHHHHHHHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMI-GTEDRLLNKW-AQFVKK-F-NF---FPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~-G~~~~~~~~~-~~~~~~-~-~~---~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+.+.+++.+ ++++..++|+.++ |.+. +-..+ ...... + .. ...+........+++.+|+|+++..
T Consensus 572 A~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~av~~ 650 (676)
T TIGR02632 572 AEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGI-WDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEAVFF 650 (676)
T ss_pred HHHHHHHHHHHHhcccCeEEEEEECCceecCccc-ccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence 999988754 4888999999886 3210 00000 000000 0 00 0000111122356889999999998
Q ss_pred HhhcCC-CCCCceEEecCCcc
Q 047628 207 ALKDDG-TSMGKIYELGGPDI 226 (327)
Q Consensus 207 ~l~~~~-~~~~~~~~v~~~~~ 226 (327)
++.... ...|+++++.++..
T Consensus 651 L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 651 LASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred HhCCcccCCcCcEEEECCCch
Confidence 886432 22588999988653
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.3e-16 Score=141.02 Aligned_cols=160 Identities=13% Similarity=0.101 Sum_probs=116.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
+++++++||||+|+||.++++.|+++|++|++++|+.++......... ...++.++.+|+++.+++.++++.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 446889999999999999999999999999999998655332222221 113588899999999988877753
Q ss_pred ccEEEEcccccccc------C---cchhHhhhhHHHHHHHHHHHH----cCC-cceEEEEeccCCCC-------------
Q 047628 77 ANVVINLIGREYET------R---NYSFEDVNHFMAERIAGIAKE----HGG-IMRFIQISCLGASS------------- 129 (327)
Q Consensus 77 ~d~vi~~a~~~~~~------~---~~~~~~~n~~~~~~l~~a~~~----~~~-v~~~v~~Ss~~v~~------------- 129 (327)
+|+|||+||..... . .+..+++|+.++.++++++.. .+. ..|+|++||...+.
T Consensus 84 iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~ 163 (322)
T PRK07453 84 LDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPA 163 (322)
T ss_pred ccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCcc
Confidence 89999999964221 1 134678999998888887654 221 24999999854310
Q ss_pred -----------------------CCC-chHHHhHHHHHHHHH----hh----CCCeEEEecCeeecC
Q 047628 130 -----------------------SSP-SRVFSTKAAAEEAVL----RE----LPWATIMRPAAMIGT 164 (327)
Q Consensus 130 -----------------------~~~-~~y~~~K~~~E~~~~----~~----~~~~~i~r~~~~~G~ 164 (327)
..| ..|+.+|.+.+.+.+ ++ ++.+..++||.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 011 579999987755443 32 488999999999764
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.8e-16 Score=136.08 Aligned_cols=210 Identities=15% Similarity=0.037 Sum_probs=141.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|.||++++++|+++|++|++++|+.+.........+ .++..+++|+.+++++.++++ .+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHG--DAVVGVEGDVRSLDDHKEAVARCVAAFGKI 80 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcC--CceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 456899999999999999999999999999999997654322211111 357889999999888776664 46
Q ss_pred cEEEEccccccc-----cCc--------chhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 78 NVVINLIGREYE-----TRN--------YSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~-----~~~--------~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
|++||+||.... ..+ ...+++|+.++..+++++...- .-.++|++||.......+ ..|+.+|.
T Consensus 81 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa 160 (262)
T TIGR03325 81 DCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKH 160 (262)
T ss_pred CEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHHH
Confidence 999999986321 111 2467889999999988886531 013688888765443322 57999999
Q ss_pred HHHHHHHhhC------CCeEEEecCeeecCCChh--H--HH-------HHHHHhhcCceeeecCCCceecceeHHHHHHH
Q 047628 141 AAEEAVLREL------PWATIMRPAAMIGTEDRL--L--NK-------WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 141 ~~E~~~~~~~------~~~~i~r~~~~~G~~~~~--~--~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
+.+.+.+... +++..+.||.+..+-... . .. ...... ...+ ...+...+|+|++
T Consensus 161 a~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-------~~r~~~p~eva~~ 231 (262)
T TIGR03325 161 AVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLK--SVLP-------IGRMPDAEEYTGA 231 (262)
T ss_pred HHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhh--hcCC-------CCCCCChHHhhhh
Confidence 9998886642 678888999886442110 0 00 000001 0111 1235667999999
Q ss_pred HHHHhhcCC-C-CCCceEEecCCc
Q 047628 204 VTAALKDDG-T-SMGKIYELGGPD 225 (327)
Q Consensus 204 ~~~~l~~~~-~-~~~~~~~v~~~~ 225 (327)
++.++..+. . ..|+++.+.++.
T Consensus 232 ~~~l~s~~~~~~~tG~~i~vdgg~ 255 (262)
T TIGR03325 232 YVFFATRGDTVPATGAVLNYDGGM 255 (262)
T ss_pred eeeeecCCCcccccceEEEecCCe
Confidence 998887532 1 267888887753
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.4e-16 Score=132.93 Aligned_cols=209 Identities=14% Similarity=0.110 Sum_probs=143.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
++++||||+|.||+++++.|+++|++|++++|+............ ...++.++++|+++++++.++++ .+|+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 689999999999999999999999999999998654322221111 01368899999999998877664 4699
Q ss_pred EEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC--CCchHHHhHHHHHHH
Q 047628 80 VINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS--SPSRVFSTKAAAEEA 145 (327)
Q Consensus 80 vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E~~ 145 (327)
|||++|..... +. ...+++|+.++.++++++.. .+.-.++|++||...... ....|+.+|.+.+.+
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~ 161 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAM 161 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHH
Confidence 99999853211 11 34678899999999988843 221258999998765433 236799999999888
Q ss_pred HHh--------hCCCeEEEecCeeecCCC--hh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-
Q 047628 146 VLR--------ELPWATIMRPAAMIGTED--RL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG- 212 (327)
Q Consensus 146 ~~~--------~~~~~~i~r~~~~~G~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 212 (327)
.+. .++++..++||.+.++.. .. -......+.+. .++ ..+...+|+++++..++....
T Consensus 162 ~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~va~~~~~l~~~~~~ 232 (252)
T PRK07677 162 TRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQS--VPL-------GRLGTPEEIAGLAYFLLSDEAA 232 (252)
T ss_pred HHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhcc--CCC-------CCCCCHHHHHHHHHHHcCcccc
Confidence 764 258899999998874321 11 01111112111 111 235677999999988887542
Q ss_pred CCCCceEEecCCc
Q 047628 213 TSMGKIYELGGPD 225 (327)
Q Consensus 213 ~~~~~~~~v~~~~ 225 (327)
...|+.+.+.++.
T Consensus 233 ~~~g~~~~~~gg~ 245 (252)
T PRK07677 233 YINGTCITMDGGQ 245 (252)
T ss_pred ccCCCEEEECCCe
Confidence 2267788887764
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.6e-16 Score=135.33 Aligned_cols=200 Identities=15% Similarity=0.054 Sum_probs=139.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+..++++||||+|.||.++++.|+++|++|++++|+.+.........+....+..+++|++|++++.++++ .+
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 34689999999999999999999999999999999876543322323222346667899999988877654 47
Q ss_pred cEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHHc---CCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 78 NVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKEH---GGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~---~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
|+|||++|..... +. ...+++|+.++.++++++... . ..++|++||.......+ ..|+.+|..++.
T Consensus 87 d~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaal~~ 165 (296)
T PRK05872 87 DVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAAFAAAPGMAAYCASKAGVEA 165 (296)
T ss_pred CEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhhcCCCCCchHHHHHHHHHHH
Confidence 9999999974321 11 346778999999998887542 2 24899999987655444 689999999998
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChh-HH--HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRL-LN--KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.. ++.+.++.||.+..+.... .. ......... ++. ....++..+|+|++++.++.+..
T Consensus 166 ~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~--~~~-----p~~~~~~~~~va~~i~~~~~~~~ 236 (296)
T PRK05872 166 FANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRAR--LPW-----PLRRTTSVEKCAAAFVDGIERRA 236 (296)
T ss_pred HHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhh--CCC-----cccCCCCHHHHHHHHHHHHhcCC
Confidence 87653 4889999999886431110 00 011111111 111 11245678999999999988654
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=134.10 Aligned_cols=214 Identities=19% Similarity=0.097 Sum_probs=139.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
++++|||++|.||.+++++|++.|++|+++.|+.+.......... ...++..+.+|+++++++.++++ .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 479999999999999999999999999999998554322222111 11357889999999998887764 3699
Q ss_pred EEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCC--CchHHHhHHHHHHH
Q 047628 80 VINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSS--PSRVFSTKAAAEEA 145 (327)
Q Consensus 80 vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E~~ 145 (327)
|||+++..... +. ...+++|+.++..+++++. +.+.-.++|++||....... ...|+.+|.+.|.+
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~ 160 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGL 160 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHH
Confidence 99999874321 11 2457788888877766554 33312589999986553333 37899999999988
Q ss_pred HHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeee------cCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF------GDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.. ++.+.+++||.+..+.. ..+..........+.. ........+.+.+|+++++..++..+.
T Consensus 161 ~~~l~~~~~~~~i~v~~v~Pg~i~t~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~ 237 (254)
T TIGR02415 161 TQTAAQELAPKGITVNAYCPGIVKTPMW---EEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDS 237 (254)
T ss_pred HHHHHHHhcccCeEEEEEecCcccChhh---hhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhccccc
Confidence 8653 48899999998754321 1111100000000000 000011236788999999999998765
Q ss_pred C-CCCceEEecCC
Q 047628 213 T-SMGKIYELGGP 224 (327)
Q Consensus 213 ~-~~~~~~~v~~~ 224 (327)
. ..|+.+.+.++
T Consensus 238 ~~~~g~~~~~d~g 250 (254)
T TIGR02415 238 DYITGQSILVDGG 250 (254)
T ss_pred CCccCcEEEecCC
Confidence 3 14666666664
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.9e-15 Score=130.46 Aligned_cols=191 Identities=15% Similarity=0.131 Sum_probs=134.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh----------hhcccCCCCCeeEEeeCCCChhHHHHHh
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR----------HLKLMGDLGQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----------~~~~~~~~~~v~~~~~Dl~~~~~~~~~~ 74 (327)
+.+++++||||+|+||+++++.|+++|++|+++.|+.+.... .+...+ .++.++.+|+++++++.+++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~ 81 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG--GQALPLVGDVRDEDQVAAAV 81 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHH
Confidence 445799999999999999999999999999999998653211 111111 35788899999999888776
Q ss_pred c-------cccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCC--C-
Q 047628 75 A-------KANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSS--P- 132 (327)
Q Consensus 75 ~-------~~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~--~- 132 (327)
+ .+|+|||++|...... + ...+++|+.++.++++++... + -.+++++||....... +
T Consensus 82 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~ 160 (273)
T PRK08278 82 AKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWFAP 160 (273)
T ss_pred HHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhccccccCC
Confidence 5 5799999998743211 1 346678999999999988642 2 2478888886433222 2
Q ss_pred -chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 133 -SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 133 -~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
..|+.+|.++|.+++.. ++.+..+.|+.++.. ..... .. .. ......+...+|+|+.+
T Consensus 161 ~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t--~~~~~----~~-~~-------~~~~~~~~~p~~va~~~ 226 (273)
T PRK08278 161 HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIAT--AAVRN----LL-GG-------DEAMRRSRTPEIMADAA 226 (273)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCcccc--HHHHh----cc-cc-------cccccccCCHHHHHHHH
Confidence 78999999999988764 388889999854321 11111 11 01 11112356789999999
Q ss_pred HHHhhcCC
Q 047628 205 TAALKDDG 212 (327)
Q Consensus 205 ~~~l~~~~ 212 (327)
+.++..+.
T Consensus 227 ~~l~~~~~ 234 (273)
T PRK08278 227 YEILSRPA 234 (273)
T ss_pred HHHhcCcc
Confidence 99988654
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.9e-16 Score=132.76 Aligned_cols=213 Identities=13% Similarity=0.040 Sum_probs=137.6
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh-hhcccC--CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR-HLKLMG--DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
..++.++++||||++.||++++++|++.|++|+++.|+.+.... ...... ...++.++.+|+++++++.++++
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE 83 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 44667899999999999999999999999999888765432211 111110 11357899999999998877664
Q ss_pred ---cccEEEEccccccc------c-----Cc---chhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--
Q 047628 76 ---KANVVINLIGREYE------T-----RN---YSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP-- 132 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~------~-----~~---~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~-- 132 (327)
.+|++||+||.... . ++ ...+++|+.+...+.+. +++.+ -.++|++||.......|
T Consensus 84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~ 162 (260)
T PRK08416 84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIENY 162 (260)
T ss_pred hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCCCCc
Confidence 36999999975321 0 01 22455566554444443 44444 45899999976543333
Q ss_pred chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 133 SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 133 ~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
..|+.+|.+++.+.+.+ ++++..+.||.+-.+..... .......... .+ ...+...+|+|.
T Consensus 163 ~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~--~~-------~~r~~~p~~va~ 233 (260)
T PRK08416 163 AGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEEL--SP-------LNRMGQPEDLAG 233 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhc--CC-------CCCCCCHHHHHH
Confidence 68999999999888653 48889999987743210000 0111111110 11 123567899999
Q ss_pred HHHHHhhcCCC-CCCceEEecCCc
Q 047628 203 AVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 203 ~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
+++.++..... ..|+.+.+.++.
T Consensus 234 ~~~~l~~~~~~~~~G~~i~vdgg~ 257 (260)
T PRK08416 234 ACLFLCSEKASWLTGQTIVVDGGT 257 (260)
T ss_pred HHHHHcChhhhcccCcEEEEcCCe
Confidence 99998875432 257788887753
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.9e-16 Score=133.24 Aligned_cols=151 Identities=19% Similarity=0.131 Sum_probs=112.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----------
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----------- 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----------- 75 (327)
||+++||||||+||++++++|+++|++|++++|+..... ....+ .++.++.+|+.+++++.+++.
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--AAAAG--ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--hhccC--CeEEEEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 468999999999999999999999999999999865421 11111 358889999999988877442
Q ss_pred cccEEEEccccccccC---------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 KANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
..|++||+++...... ....+++|+.++..+.+.+. +.+ ..++|++||.......+ ..|+.+|.
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~ 155 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYAGWSVYCATKA 155 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCCCchHHHHHHH
Confidence 3689999998643211 13456788888666655544 333 56999999987654333 68999999
Q ss_pred HHHHHHHhh------CCCeEEEecCeee
Q 047628 141 AAEEAVLRE------LPWATIMRPAAMI 162 (327)
Q Consensus 141 ~~E~~~~~~------~~~~~i~r~~~~~ 162 (327)
.+|.+++.+ ++++.+++||.+-
T Consensus 156 a~~~~~~~~~~~~~~~i~v~~v~pg~~~ 183 (243)
T PRK07023 156 ALDHHARAVALDANRALRIVSLAPGVVD 183 (243)
T ss_pred HHHHHHHHHHhcCCCCcEEEEecCCccc
Confidence 999998743 4889999998774
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-15 Score=128.97 Aligned_cols=213 Identities=16% Similarity=0.130 Sum_probs=145.2
Q ss_pred CCcccCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|+..++.++++||||+ +-||+.++++|+++|++|++..|+. +....+.+... .++..+++|+++++++.++++
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~ 78 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVD-EEDLLVECDVASDESIERAFATIK 78 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHH
Confidence 6666778999999999 7999999999999999999999873 22222222211 357889999999988876653
Q ss_pred ----cccEEEEccccccc---------cCc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHH
Q 047628 76 ----KANVVINLIGREYE---------TRN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVF 136 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~---------~~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~ 136 (327)
.+|++||+||.... .+. ...+++|+.++..+.+++...- +-.++|++||.......| ..|+
T Consensus 79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~ 158 (252)
T PRK06079 79 ERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMG 158 (252)
T ss_pred HHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhH
Confidence 37999999986431 011 2356778888888877765431 014789999876543333 6799
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCC-hh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTED-RL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
.+|.+.+.+.+.. ++++..+.||.+-.+.. .. -........+. .+. ..+...+|+|+++..
T Consensus 159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~pedva~~~~~ 229 (252)
T PRK06079 159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSR--TVD-------GVGVTIEEVGNTAAF 229 (252)
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhc--Ccc-------cCCCCHHHHHHHHHH
Confidence 9999999888653 48899999998854311 11 01111111111 111 235677999999999
Q ss_pred HhhcCCC-CCCceEEecCC
Q 047628 207 ALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~ 224 (327)
++..... ..|++..+.++
T Consensus 230 l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 230 LLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred HhCcccccccccEEEeCCc
Confidence 9876432 26778877765
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-15 Score=133.13 Aligned_cols=210 Identities=19% Similarity=0.129 Sum_probs=139.2
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh-hcccC-CCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH-LKLMG-DLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
..+..++++||||+|+||++++++|+++|++|++.+|........ ..... ...++..+.+|+++++++.++++
T Consensus 8 ~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~ 87 (306)
T PRK07792 8 TDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGL 87 (306)
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 345578999999999999999999999999999988764332111 11110 11367889999999988877664
Q ss_pred -cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc--------C-C-cceEEEEeccCCCCCC--Cch
Q 047628 76 -KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH--------G-G-IMRFIQISCLGASSSS--PSR 134 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~--------~-~-v~~~v~~Ss~~v~~~~--~~~ 134 (327)
.+|+|||+||..... .....+++|+.++.++++++... + . -.++|++||....... ...
T Consensus 88 g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 167 (306)
T PRK07792 88 GGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQAN 167 (306)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCch
Confidence 479999999975331 11346788999999998876421 0 0 1389999987654333 367
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|+.+|.+++.+.+.+ ++.+.++.|+. . ......... . .+.. ......++..+|++.++..+
T Consensus 168 Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~--t~~~~~~~~----~--~~~~--~~~~~~~~~pe~va~~v~~L 235 (306)
T PRK07792 168 YGAAKAGITALTLSAARALGRYGVRANAICPRA--R--TAMTADVFG----D--APDV--EAGGIDPLSPEHVVPLVQFL 235 (306)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--C--Cchhhhhcc----c--cchh--hhhccCCCCHHHHHHHHHHH
Confidence 999999999887643 47788888873 1 111111000 0 0000 00123446789999999988
Q ss_pred hhcCC-CCCCceEEecCC
Q 047628 208 LKDDG-TSMGKIYELGGP 224 (327)
Q Consensus 208 l~~~~-~~~~~~~~v~~~ 224 (327)
+.... ...|++|.+.++
T Consensus 236 ~s~~~~~~tG~~~~v~gg 253 (306)
T PRK07792 236 ASPAAAEVNGQVFIVYGP 253 (306)
T ss_pred cCccccCCCCCEEEEcCC
Confidence 87533 126778888764
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.1e-15 Score=128.32 Aligned_cols=216 Identities=16% Similarity=0.103 Sum_probs=142.3
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc-cc-CCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-LM-GDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-~~-~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|...++.++++||||+|.||+++++.|+++|+.|+++.|+......... .. ....++.++.+|+++++++.++++
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 4556777899999999999999999999999999988886533221111 11 011357788999999998877664
Q ss_pred ----cccEEEEccccccccC--------cchhHhhhhHHHHHHH----HHHHHcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ----KANVVINLIGREYETR--------NYSFEDVNHFMAERIA----GIAKEHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~----~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
.+|++||++|...... ....+++|+.++..++ +.+++.+.-.++|++||.......+ ..|+.
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~ 160 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAA 160 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHH
Confidence 3799999999743211 1235678877665544 4445543125899999976543333 68999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-hH--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LL--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+|.+.+.+.+.. ++++..++||.+..+... .+ +........ ..+. ..+...+|+++.+..+
T Consensus 161 sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~va~~~~~l 231 (261)
T PRK08936 161 SKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVES--MIPM-------GYIGKPEEIAAVAAWL 231 (261)
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHh--cCCC-------CCCcCHHHHHHHHHHH
Confidence 998887766543 489999999988765321 11 111111111 1111 2356679999999998
Q ss_pred hhcCCC-CCCceEEecCCc
Q 047628 208 LKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~ 225 (327)
+..... ..|..+.+.++.
T Consensus 232 ~s~~~~~~~G~~i~~d~g~ 250 (261)
T PRK08936 232 ASSEASYVTGITLFADGGM 250 (261)
T ss_pred cCcccCCccCcEEEECCCc
Confidence 875432 256667776653
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-15 Score=129.56 Aligned_cols=220 Identities=11% Similarity=0.022 Sum_probs=145.1
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|.+.+.+++++|||++|.||+++++.|+++|++|++++|+.++.......... ..++..+.+|+++++++.++++
T Consensus 1 ~~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g 80 (259)
T PRK06125 1 MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG 80 (259)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC
Confidence 45556678999999999999999999999999999999987643322211110 1357889999999998887765
Q ss_pred cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
.+|++||++|...... . ...+++|+.+...+++++ ++.+ -.++|++||.......+ ..|..+|.+
T Consensus 81 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~ask~a 159 (259)
T PRK06125 81 DIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPDADYICGSAGNAA 159 (259)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCCCCchHhHHHHHH
Confidence 4799999998743211 1 235677888887777765 3333 34799988865543222 568899999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCcee------eecCCCceecceeHHHHHHHHHHHh
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP------LFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+.+.+.. ++++..+.||.+..+. ...+...-. ...+. .+-.......+...+|+|++++.++
T Consensus 160 l~~~~~~la~e~~~~gi~v~~i~PG~v~t~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~ 235 (259)
T PRK06125 160 LMAFTRALGGKSLDDGVRVVGVNPGPVATDR---MLTLLKGRA-RAELGDESRWQELLAGLPLGRPATPEEVADLVAFLA 235 (259)
T ss_pred HHHHHHHHHHHhCccCeEEEEEecCccccHH---HHHHHHhhh-hcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHc
Confidence 98887754 4889999999886431 111110000 00000 0000001123567899999999988
Q ss_pred hcCCC-CCCceEEecCCc
Q 047628 209 KDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~ 225 (327)
..... ..|+.+.+.++.
T Consensus 236 ~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 236 SPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred CchhccccCceEEecCCe
Confidence 75432 267888888764
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-15 Score=129.32 Aligned_cols=209 Identities=14% Similarity=0.105 Sum_probs=143.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.+++++|||++|.||++++++|++.|++|++++|..... ...+...+ .++..+++|+++++++.++++ .
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALG--RRFLSLTADLRKIDGIPALLERAVAEFGH 85 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4468999999999999999999999999999887754221 12222222 357888999999988887775 4
Q ss_pred ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||..... .-...+++|+.++.++++++... +.-.++|++||.......+ ..|+.+|.+.
T Consensus 86 ~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~ 165 (253)
T PRK08993 86 IDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGV 165 (253)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHH
Confidence 79999999874321 11356789999998888876532 2114799999976654443 6899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
|.+.+.. ++++..++||.+-.+..... ........ ..++. ..+...+|+|+.++.++....
T Consensus 166 ~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~--~~~p~-------~r~~~p~eva~~~~~l~s~~~ 236 (253)
T PRK08993 166 MGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEIL--DRIPA-------GRWGLPSDLMGPVVFLASSAS 236 (253)
T ss_pred HHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHH--hcCCC-------CCCcCHHHHHHHHHHHhCccc
Confidence 8887654 48899999998864321111 00011111 11111 235677999999999997653
Q ss_pred C-CCCceEEecCC
Q 047628 213 T-SMGKIYELGGP 224 (327)
Q Consensus 213 ~-~~~~~~~v~~~ 224 (327)
. ..|+.+.+.++
T Consensus 237 ~~~~G~~~~~dgg 249 (253)
T PRK08993 237 DYINGYTIAVDGG 249 (253)
T ss_pred cCccCcEEEECCC
Confidence 3 25777777664
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.9e-16 Score=129.65 Aligned_cols=205 Identities=13% Similarity=0.069 Sum_probs=137.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh-hhccc-CCCCCeeEEeeCCCChhHHHHHhc-------cccEE
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR-HLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------KANVV 80 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~v 80 (327)
|+||||+|+||.++++.|+++|++|+++.|+.+.... ..... ....++.++.+|+++++++.++++ ..|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999999876543211 11111 111368899999999998877664 35999
Q ss_pred EEcccccccc--------CcchhHhhhhHHHHHHHHHHH-----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 81 INLIGREYET--------RNYSFEDVNHFMAERIAGIAK-----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 81 i~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~-----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
||++|..... .....+++|+.++.++++++. +.+ ..++|++||.......+ ..|+.+|.+.+.+
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~ 159 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRGQVNYSAAKAGLIGA 159 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence 9999864321 123467889999999888752 233 46899999965432322 6899999988776
Q ss_pred HHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCc
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGK 217 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~ 217 (327)
.+.. +++++.++||.+.++.............. ..++ ..+...+|+++++..++..+.. ..|.
T Consensus 160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~va~~~~~l~~~~~~~~~g~ 230 (239)
T TIGR01831 160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALK--TVPM-------NRMGQPAEVASLAGFLMSDGASYVTRQ 230 (239)
T ss_pred HHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHHHHHh--cCCC-------CCCCCHHHHHHHHHHHcCchhcCccCC
Confidence 6543 48899999998876532212111111111 1111 1245669999999999886432 2465
Q ss_pred eEEecCC
Q 047628 218 IYELGGP 224 (327)
Q Consensus 218 ~~~v~~~ 224 (327)
...+.++
T Consensus 231 ~~~~~gg 237 (239)
T TIGR01831 231 VISVNGG 237 (239)
T ss_pred EEEecCC
Confidence 6666553
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.8e-15 Score=129.73 Aligned_cols=208 Identities=14% Similarity=0.096 Sum_probs=136.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~v 80 (327)
|+++||||+|.||++++++|+++|++|++++|+.+.............++.++++|+++++++.++++ .+|++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 58999999999999999999999999999999865433222222111357889999999998887764 47999
Q ss_pred EEcccccccc-------Ccc---hhHhhhhHHHHHH----HHHHH-HcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 81 INLIGREYET-------RNY---SFEDVNHFMAERI----AGIAK-EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 81 i~~a~~~~~~-------~~~---~~~~~n~~~~~~l----~~a~~-~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
||++|..... ..+ ....+|+.++..+ +..+. +.+ -.++|++||.......| ..|+.+|.+.+
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~~sKaa~~ 159 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKM-KGVLVYLSSVSVKEPMPPLVLADVTRAGLV 159 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCC-CCEEEEEeCcccCCCCCCchHHHHHHHHHH
Confidence 9999864210 111 1234555544333 33333 233 35899999987654433 67999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCCh-hHHHHH------------HHHhhcCceeeecCCCceecceeHHHHHHH
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWA------------QFVKKFNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
.+.+.. ++.+..+.||.+-.+... .+.... .... ...+ ...+...+|+|++
T Consensus 160 ~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p-------~~r~~~p~dva~~ 230 (259)
T PRK08340 160 QLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVL--ERTP-------LKRTGRWEELGSL 230 (259)
T ss_pred HHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHh--ccCC-------ccCCCCHHHHHHH
Confidence 888764 377888899887544211 111000 0000 0111 1235678999999
Q ss_pred HHHHhhcCCC-CCCceEEecCCc
Q 047628 204 VTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 204 ~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
++.++..... ..|++..+.++.
T Consensus 231 ~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 231 IAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred HHHHcCcccccccCceEeecCCc
Confidence 9999885432 267778887764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.7e-15 Score=142.68 Aligned_cols=209 Identities=17% Similarity=0.125 Sum_probs=147.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
..++++||||+|.||.+++++|+++|++|+++.|+.++........+ .++..+.+|++|++++.++++ .+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG--DEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999999999999999999999999999998654333222222 356778999999998887764 369
Q ss_pred EEEEcccccccc------C---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 79 VVINLIGREYET------R---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 79 ~vi~~a~~~~~~------~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
++||+||..... + -...+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|...+.+.
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~ 425 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLS 425 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHH
Confidence 999999974211 1 13467889999999988876531 125899999976654333 78999999999887
Q ss_pred Hhh-------CCCeEEEecCeeecCCChhH----HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDRLL----NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
+.. ++++..++||.+..+..... ........+. .+. ..+...+|+|++++.++..... .
T Consensus 426 ~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~dia~~~~~l~s~~~~~~ 496 (520)
T PRK06484 426 RSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRR--IPL-------GRLGDPEEVAEAIAFLASPAASYV 496 (520)
T ss_pred HHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCccccCc
Confidence 654 48999999998875421110 0001111111 111 1346789999999999875432 2
Q ss_pred CCceEEecCCc
Q 047628 215 MGKIYELGGPD 225 (327)
Q Consensus 215 ~~~~~~v~~~~ 225 (327)
.|+.+.+.++.
T Consensus 497 ~G~~i~vdgg~ 507 (520)
T PRK06484 497 NGATLTVDGGW 507 (520)
T ss_pred cCcEEEECCCc
Confidence 68888888763
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.8e-15 Score=128.67 Aligned_cols=211 Identities=12% Similarity=0.057 Sum_probs=142.6
Q ss_pred cCCcEEEEEcCCC-ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc---CCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTG-FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM---GDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG-~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+..++++||||+| -||+++++.|+++|++|++++|+..+........ ....++..+++|+++++++.++++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3468999999998 5999999999999999999998765533222211 111257889999999988887664
Q ss_pred --cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC--CCchHHHhH
Q 047628 76 --KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS--SPSRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~--~~~~y~~~K 139 (327)
.+|+|||++|...... -...+++|+.++..+++++.. .+.-.++|++||...... ....|+.+|
T Consensus 95 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK 174 (262)
T PRK07831 95 LGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAK 174 (262)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHH
Confidence 4699999999642211 123567888888888777643 210247888888654322 226799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.+.. ++++.+++||.+..+.... -........... ++ ..+...+|+|++++.++..
T Consensus 175 aal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~--~~-------~r~~~p~~va~~~~~l~s~ 245 (262)
T PRK07831 175 AGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAARE--AF-------GRAAEPWEVANVIAFLASD 245 (262)
T ss_pred HHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHcCc
Confidence 9999988754 4899999999887653211 111112222111 11 2355679999999998876
Q ss_pred CCC-CCCceEEecCC
Q 047628 211 DGT-SMGKIYELGGP 224 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~ 224 (327)
... ..|+++.+.++
T Consensus 246 ~~~~itG~~i~v~~~ 260 (262)
T PRK07831 246 YSSYLTGEVVSVSSQ 260 (262)
T ss_pred hhcCcCCceEEeCCC
Confidence 532 26778877764
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.6e-15 Score=127.13 Aligned_cols=189 Identities=13% Similarity=0.072 Sum_probs=129.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCC--hhHHHHHh------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRD--DNTIKATM------ 74 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~--~~~~~~~~------ 74 (327)
|++++++||||+|+||+++++.|+++|++|++++|+++......... .....+..+.+|+.+ .+++.+++
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 44579999999999999999999999999999999876533222211 011246678899865 33444332
Q ss_pred --ccccEEEEccccccccC-----c----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHH
Q 047628 75 --AKANVVINLIGREYETR-----N----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 75 --~~~d~vi~~a~~~~~~~-----~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
..+|+|||+||...... + ...+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.
T Consensus 84 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~ 162 (239)
T PRK08703 84 TQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPKAYWGGFGA 162 (239)
T ss_pred hCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCCCCccchHH
Confidence 34799999999642211 1 23578899988888887643 33 45899999865543333 57999
Q ss_pred hHHHHHHHHHhh--------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 138 TKAAAEEAVLRE--------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 138 ~K~~~E~~~~~~--------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|.+.+.+.+.. ++++.+++||.+.++.... .. ++ .....+...+|++..+..++.
T Consensus 163 sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~------------~~--~~--~~~~~~~~~~~~~~~~~~~~~ 226 (239)
T PRK08703 163 SKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIK------------SH--PG--EAKSERKSYGDVLPAFVWWAS 226 (239)
T ss_pred hHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccc------------cC--CC--CCccccCCHHHHHHHHHHHhC
Confidence 999999987653 3788999999998653110 00 01 111234678999999999987
Q ss_pred c
Q 047628 210 D 210 (327)
Q Consensus 210 ~ 210 (327)
.
T Consensus 227 ~ 227 (239)
T PRK08703 227 A 227 (239)
T ss_pred c
Confidence 4
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=128.11 Aligned_cols=191 Identities=14% Similarity=0.014 Sum_probs=130.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCC--ChhHHHHHh------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPR--DDNTIKATM------ 74 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~--~~~~~~~~~------ 74 (327)
+..++++||||+|+||.++++.|++.|++|++++|+.+.......... ...++.++.+|++ +++++.+++
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999999999999998754332222211 1135677788886 555444433
Q ss_pred -ccccEEEEcccccccc---------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHh
Q 047628 75 -AKANVVINLIGREYET---------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 75 -~~~d~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
..+|+|||+|+..... .....+++|+.++.++++++. +.+ ..+||++||.......+ ..|+.+
T Consensus 90 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~s 168 (247)
T PRK08945 90 FGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRANWGAYAVS 168 (247)
T ss_pred hCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCCCCcccHHH
Confidence 3579999999864221 113467789998888887764 445 67999999975543322 679999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
|.+.|.+++.. ++++.+++|+.+-.+... .. ++- .....+...+|++.++..++...
T Consensus 169 K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~-------~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~ 232 (247)
T PRK08945 169 KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRA-------SA-----FPG----EDPQKLKTPEDIMPLYLYLMGDD 232 (247)
T ss_pred HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchh-------hh-----cCc----ccccCCCCHHHHHHHHHHHhCcc
Confidence 99999987654 377888888877533110 00 000 01124567899999999988654
Q ss_pred C
Q 047628 212 G 212 (327)
Q Consensus 212 ~ 212 (327)
.
T Consensus 233 ~ 233 (247)
T PRK08945 233 S 233 (247)
T ss_pred c
Confidence 4
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.68 E-value=4.4e-15 Score=127.84 Aligned_cols=211 Identities=12% Similarity=0.099 Sum_probs=137.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC-CchhhhcccC--CCCCeeEEeeCCCChhHH----HHHh------
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE-DDPRHLKLMG--DLGQIVPMKFNPRDDNTI----KATM------ 74 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~-~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~----~~~~------ 74 (327)
+.++||||+|+||++++++|+++|++|+++.|+.. ........+. ...++..+.+|++|++++ .+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 47999999999999999999999999999876543 3222222111 113466789999998754 3332
Q ss_pred -ccccEEEEcccccccc-----Cc--------------chhHhhhhHHHHHHHHHHHHcC---------CcceEEEEecc
Q 047628 75 -AKANVVINLIGREYET-----RN--------------YSFEDVNHFMAERIAGIAKEHG---------GIMRFIQISCL 125 (327)
Q Consensus 75 -~~~d~vi~~a~~~~~~-----~~--------------~~~~~~n~~~~~~l~~a~~~~~---------~v~~~v~~Ss~ 125 (327)
.++|+|||+||..... +. ...+++|+.++..+++++.... ...+++.+||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 3489999999863211 10 1347888888888887754321 02367888876
Q ss_pred CCCCCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceeccee
Q 047628 126 GASSSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVY 196 (327)
Q Consensus 126 ~v~~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 196 (327)
......+ ..|+.+|.+++.+.+.. +++++.++||.+..+.+.. ......... ..+. + ..+..
T Consensus 162 ~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-~~~~~~~~~--~~~~-~-----~~~~~ 232 (267)
T TIGR02685 162 MTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-FEVQEDYRR--KVPL-G-----QREAS 232 (267)
T ss_pred hccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-hhHHHHHHH--hCCC-C-----cCCCC
Confidence 5543333 68999999999888764 4899999999886542211 111111111 1111 0 12457
Q ss_pred HHHHHHHHHHHhhcCCC-CCCceEEecCCccc
Q 047628 197 VVDVAAAVTAALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 197 ~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
.+|++++++.++..... ..|+.+.+.++..+
T Consensus 233 ~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 233 AEQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264 (267)
T ss_pred HHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence 79999999999876432 26778888876544
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=3.1e-15 Score=129.18 Aligned_cols=200 Identities=15% Similarity=0.085 Sum_probs=130.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh---cccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL---KLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
|+++||||+|.||.++++.|+++|++|++++|+.+...... ...+ ...+.++.+|+.+++++.++++ .+
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALG-GTVPEHRALDISDYDAVAAFAADIHAAHGSM 79 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CCcceEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 47999999999999999999999999999999765432221 1111 1124557899999988776554 36
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||++|...... -...+++|+.++.++++++.. .+...++|++||.......+ ..|+.+|.+.+
T Consensus 80 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~ 159 (272)
T PRK07832 80 DVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR 159 (272)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence 99999998642211 134678899999999998642 22135899999976543333 67999998777
Q ss_pred HHHHh-------hCCCeEEEecCeeecCCChhHHHHHHHHh-hcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 144 EAVLR-------ELPWATIMRPAAMIGTEDRLLNKWAQFVK-KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 144 ~~~~~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+. .++++++++||.+.++....... .... ..+...... .......+..+|+|+.++.+++++
T Consensus 160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEI--AGVDREDPRVQKWV-DRFRGHAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccc--cccCcchhhHHHHH-HhcccCCCCHHHHHHHHHHHHhcC
Confidence 66543 34999999999997652111000 0000 000000000 001123578999999999999644
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.8e-15 Score=120.80 Aligned_cols=223 Identities=21% Similarity=0.174 Sum_probs=162.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCE-EEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQ-VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~-V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~ 82 (327)
..+|||||+-|.+|..+++.|-.+ |.+ |++-+-.... ...- ..-.++..|+.|...+.++.- .+|.+||
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp--~~V~-----~~GPyIy~DILD~K~L~eIVVn~RIdWL~H 116 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP--ANVT-----DVGPYIYLDILDQKSLEEIVVNKRIDWLVH 116 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc--hhhc-----ccCCchhhhhhccccHHHhhcccccceeee
Confidence 468999999999999999988765 654 4443322111 1111 123577889999999998874 4899999
Q ss_pred cccccc---ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-CC-------------chHHHhHHHHHHH
Q 047628 83 LIGREY---ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-SP-------------SRVFSTKAAAEEA 145 (327)
Q Consensus 83 ~a~~~~---~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-~~-------------~~y~~~K~~~E~~ 145 (327)
..+..+ ..+.....++|+.|..|+++.|+++. + ++...||+++.+. +| .-||.+|..+|-+
T Consensus 117 fSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L-~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSKVHAEL~ 194 (366)
T KOG2774|consen 117 FSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-L-KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSKVHAELL 194 (366)
T ss_pred HHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-e-eEeecccccccCCCCCCCCCCCeeeecCceeechhHHHHHHH
Confidence 876532 23334567889999999999999997 6 5556889887532 22 6799999998765
Q ss_pred HH----hhCCCeEEEecCeeecC---C----ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 146 VL----RELPWATIMRPAAMIGT---E----DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 146 ~~----~~~~~~~i~r~~~~~G~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
-. ..++++-.+|.+.++.. + +.....|..... .+....+-.++.+..+++.+|.-++++..+..+...
T Consensus 195 GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~-~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~~ 273 (366)
T KOG2774|consen 195 GEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQ-KGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQS 273 (366)
T ss_pred HHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHH-cCCcccccCCCccCceeehHHHHHHHHHHHhCCHHH
Confidence 43 34699999998877753 2 223444554444 444555557889999999999999999888866531
Q ss_pred -CCceEEecCCccccHHHHHHHHHHHh
Q 047628 215 -MGKIYELGGPDIFTVHELAELMYDTI 240 (327)
Q Consensus 215 -~~~~~~v~~~~~~s~~el~~~i~~~~ 240 (327)
..++||+++ -.+|.+|+++.+.+..
T Consensus 274 lkrr~ynvt~-~sftpee~~~~~~~~~ 299 (366)
T KOG2774|consen 274 LKRRTYNVTG-FSFTPEEIADAIRRVM 299 (366)
T ss_pred hhhheeeece-eccCHHHHHHHHHhhC
Confidence 457999998 8899999999998875
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.8e-15 Score=125.44 Aligned_cols=192 Identities=11% Similarity=0.052 Sum_probs=135.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc----cccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----KANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~vi~~ 83 (327)
|+++||||+|.||+++++.|+++|++|+++.|+.++........ +++.+++|+++++++.++++ .+|++||+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ 76 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL----DVDAIVCDNTDPASLEEARGLFPHHLDTIVNV 76 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCcEEecCCCCHHHHHHHHHHHhhcCcEEEEC
Confidence 47999999999999999999999999999999865432222221 36788999999999887775 47999999
Q ss_pred cccccc---------c-Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhh
Q 047628 84 IGREYE---------T-RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 84 a~~~~~---------~-~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~ 149 (327)
++.... . .. ...+++|+.++..+++++...- +-.++|++||... .....|+.+|.+.+.+.+..
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--~~~~~Y~asKaal~~~~~~l 154 (223)
T PRK05884 77 PAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--PAGSAEAAIKAALSNWTAGQ 154 (223)
T ss_pred CCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--CCccccHHHHHHHHHHHHHH
Confidence 874210 0 11 3466889999888888875421 0248999998662 22367999999998887654
Q ss_pred -------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEe
Q 047628 150 -------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYEL 221 (327)
Q Consensus 150 -------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v 221 (327)
++++..+.||.+..+. . ... ... +.-..+|+++.+..++..... ..|+++.+
T Consensus 155 a~e~~~~gI~v~~v~PG~v~t~~---~----~~~---~~~----------p~~~~~~ia~~~~~l~s~~~~~v~G~~i~v 214 (223)
T PRK05884 155 AAVFGTRGITINAVACGRSVQPG---Y----DGL---SRT----------PPPVAAEIARLALFLTTPAARHITGQTLHV 214 (223)
T ss_pred HHHhhhcCeEEEEEecCccCchh---h----hhc---cCC----------CCCCHHHHHHHHHHHcCchhhccCCcEEEe
Confidence 3889999999875221 0 000 000 112679999999998875432 26788888
Q ss_pred cCCc
Q 047628 222 GGPD 225 (327)
Q Consensus 222 ~~~~ 225 (327)
.++.
T Consensus 215 dgg~ 218 (223)
T PRK05884 215 SHGA 218 (223)
T ss_pred CCCe
Confidence 7754
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.4e-15 Score=132.66 Aligned_cols=183 Identities=15% Similarity=0.098 Sum_probs=123.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+++++++||||+|+||++++++|+++|++|++++|++++......... .++..+.+|++|++++.+.+.++|++||+|
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~--~~v~~v~~Dvsd~~~v~~~l~~IDiLInnA 253 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGED--LPVKTLHWQVGQEAALAELLEKVDILIINH 253 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcC--CCeEEEEeeCCCHHHHHHHhCCCCEEEECC
Confidence 456899999999999999999999999999999998654322221111 246788999999999999999999999999
Q ss_pred cccccc-----CcchhHhhhhHHHHHHHHHHHH----cCC---cceEEEEeccCCCCCCCchHHHhHHHHHHHHH--hh-
Q 047628 85 GREYET-----RNYSFEDVNHFMAERIAGIAKE----HGG---IMRFIQISCLGASSSSPSRVFSTKAAAEEAVL--RE- 149 (327)
Q Consensus 85 ~~~~~~-----~~~~~~~~n~~~~~~l~~a~~~----~~~---v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~--~~- 149 (327)
|..... .....+++|+.++.++++++.. .+. -..+|.+|+.+........|+.+|.+.+.+.. ..
T Consensus 254 Gi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~~~~~~~~Y~ASKaAl~~l~~l~~~~ 333 (406)
T PRK07424 254 GINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEVNPAFSPLYELSKRALGDLVTLRRLD 333 (406)
T ss_pred CcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccccCCCchHHHHHHHHHHHHHHHHHhC
Confidence 864221 1245788999999999998643 220 12355565543322112469999999988542 21
Q ss_pred -CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 150 -LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 150 -~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+..+..+.|+ +-... + .....+..+|+|+.++.+++++..
T Consensus 334 ~~~~I~~i~~g----p~~t~-------------~-------~~~~~~spe~vA~~il~~i~~~~~ 374 (406)
T PRK07424 334 APCVVRKLILG----PFKSN-------------L-------NPIGVMSADWVAKQILKLAKRDFR 374 (406)
T ss_pred CCCceEEEEeC----CCcCC-------------C-------CcCCCCCHHHHHHHHHHHHHCCCC
Confidence 1223333332 21100 0 011246889999999999987654
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4e-15 Score=122.33 Aligned_cols=178 Identities=22% Similarity=0.306 Sum_probs=129.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---cccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---KANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~vi~~a 84 (327)
|+++||||+|.||++++++|.++ ++|++++|+.. .+++|+++++++.++++ ++|++||++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~id~lv~~a 63 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEKVGKVDAVVSAA 63 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHhcCCCCEEEECC
Confidence 47999999999999999999999 99999988642 25789999999888776 579999999
Q ss_pred cccccc-----Cc---chhHhhhhHHHHHHHHHHHHc--CCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh---
Q 047628 85 GREYET-----RN---YSFEDVNHFMAERIAGIAKEH--GGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE--- 149 (327)
Q Consensus 85 ~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~--~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~--- 149 (327)
|..... .. ...+++|+.++.++++++... . -.+++++||.......| ..|+.+|.+.+.+.+..
T Consensus 64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e 142 (199)
T PRK07578 64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND-GGSFTLTSGILSDEPIPGGASAATVNGALEGFVKAAALE 142 (199)
T ss_pred CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 864221 11 235678899999999887642 2 24799999866543333 67999999988877643
Q ss_pred ---CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEec
Q 047628 150 ---LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222 (327)
Q Consensus 150 ---~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~ 222 (327)
++.+..++||.+-.+ .... ...++ + ..++..+|+|+++..+++... .|++|+++
T Consensus 143 ~~~gi~v~~i~Pg~v~t~----~~~~------~~~~~--~-----~~~~~~~~~a~~~~~~~~~~~--~g~~~~~~ 199 (199)
T PRK07578 143 LPRGIRINVVSPTVLTES----LEKY------GPFFP--G-----FEPVPAARVALAYVRSVEGAQ--TGEVYKVG 199 (199)
T ss_pred ccCCeEEEEEcCCcccCc----hhhh------hhcCC--C-----CCCCCHHHHHHHHHHHhccce--eeEEeccC
Confidence 588888999877422 1100 01111 1 235789999999999998653 57787753
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.1e-15 Score=127.43 Aligned_cols=209 Identities=14% Similarity=0.059 Sum_probs=139.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------~~d 78 (327)
|++.++|||+ |.||++++++|. +|++|++++|+.++......... ...++.++++|+++++++.++++ .+|
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 3468899998 689999999996 79999999998654322222111 11357889999999998887764 479
Q ss_pred EEEEccccccc-cCcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCC--------------------------
Q 047628 79 VVINLIGREYE-TRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSS-------------------------- 130 (327)
Q Consensus 79 ~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~-------------------------- 130 (327)
++||+||.... ......+++|+.++.++++++...- +-.++|++||......
T Consensus 79 ~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (275)
T PRK06940 79 GLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQ 158 (275)
T ss_pred EEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccccccccccc
Confidence 99999997532 2345688999999999999876531 0124566666433211
Q ss_pred ------CCchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCC-hhH----HHHHHHHhhcCceeeecCCCcee
Q 047628 131 ------SPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTED-RLL----NKWAQFVKKFNFFPLFGDGSTRI 192 (327)
Q Consensus 131 ------~~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~ 192 (327)
....|+.+|.+.+.+.+.. ++.+..+.||.+..+.. ..+ ......+.. ..+. .
T Consensus 159 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--~~p~-------~ 229 (275)
T PRK06940 159 PDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFA--KSPA-------G 229 (275)
T ss_pred ccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhh--hCCc-------c
Confidence 1257999999988877643 48899999998865421 111 011111111 1111 2
Q ss_pred cceeHHHHHHHHHHHhhcCC-CCCCceEEecCCc
Q 047628 193 QPVYVVDVAAAVTAALKDDG-TSMGKIYELGGPD 225 (327)
Q Consensus 193 ~~i~~~D~a~~~~~~l~~~~-~~~~~~~~v~~~~ 225 (327)
.+...+|+|++++.++.... ...|+.+.+.++.
T Consensus 230 r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 230 RPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred cCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 35678999999999886433 2267888888764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-14 Score=123.08 Aligned_cols=181 Identities=11% Similarity=0.035 Sum_probs=121.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+++++++||||+|+||++++++|+++|++|++++|+......... . .....+.+|+++.+++.+.+.++|++||+|
T Consensus 12 l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~--~--~~~~~~~~D~~~~~~~~~~~~~iDilVnnA 87 (245)
T PRK12367 12 WQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND--E--SPNEWIKWECGKEESLDKQLASLDVLILNH 87 (245)
T ss_pred hCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc--c--CCCeEEEeeCCCHHHHHHhcCCCCEEEECC
Confidence 345899999999999999999999999999999998632111111 1 123567899999999998888899999999
Q ss_pred cccccc-----CcchhHhhhhHHHHHHHHHHHHcC------CcceEEEEeccC-CCCCCCchHHHhHHHHHHHH---Hh-
Q 047628 85 GREYET-----RNYSFEDVNHFMAERIAGIAKEHG------GIMRFIQISCLG-ASSSSPSRVFSTKAAAEEAV---LR- 148 (327)
Q Consensus 85 ~~~~~~-----~~~~~~~~n~~~~~~l~~a~~~~~------~v~~~v~~Ss~~-v~~~~~~~y~~~K~~~E~~~---~~- 148 (327)
|..... .....+++|+.++.++++++...- .-..++..||.+ ........|+.+|.+.+.+. ++
T Consensus 88 G~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~~~~~~Y~aSKaal~~~~~l~~~l 167 (245)
T PRK12367 88 GINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQPALSPSYEISKRLIGQLVSLKKNL 167 (245)
T ss_pred ccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCCCCCchhHHHHHHHHHHHHHHHHH
Confidence 874221 124577899999999998765320 012343344433 22222356999999975332 11
Q ss_pred ------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 149 ------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 149 ------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.++.+..+.|+.+-.+ + . . ...+..+|+|+.++.+++++..
T Consensus 168 ~~e~~~~~i~v~~~~pg~~~t~---~--------------~----~---~~~~~~~~vA~~i~~~~~~~~~ 214 (245)
T PRK12367 168 LDKNERKKLIIRKLILGPFRSE---L--------------N----P---IGIMSADFVAKQILDQANLGLY 214 (245)
T ss_pred HHhhcccccEEEEecCCCcccc---c--------------C----c---cCCCCHHHHHHHHHHHHhcCCc
Confidence 2355666666654211 0 0 0 1246789999999999986653
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.3e-14 Score=125.11 Aligned_cols=215 Identities=17% Similarity=0.168 Sum_probs=141.0
Q ss_pred CCcccCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc--
Q 047628 1 MTYVYSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
|...|+.+.+|||||++ -||+.++++|+++|++|.+..|+.... ...... ........+++|++|++++.++++
T Consensus 1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~-~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~ 79 (271)
T PRK06505 1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG-KRVKPLAESLGSDFVLPCDVEDIASVDAVFEAL 79 (271)
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH-HHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHH
Confidence 44556678999999996 999999999999999999998874321 111111 001123468999999988876653
Q ss_pred -----cccEEEEcccccccc---------Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chH
Q 047628 76 -----KANVVINLIGREYET---------RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRV 135 (327)
Q Consensus 76 -----~~d~vi~~a~~~~~~---------~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y 135 (327)
.+|++||+||..... +. ...+++|+.++.++.+++...= +-.++|++||.......| ..|
T Consensus 80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y 159 (271)
T PRK06505 80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVM 159 (271)
T ss_pred HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchh
Confidence 379999999964310 11 2356788888888777664321 014799999876543333 679
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH-H--HHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-N--KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
+.+|.+.+.+.+.. ++++..+.||.+-.+....+ . .......+ ..+. ..+...+|+|++++
T Consensus 160 ~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~peeva~~~~ 230 (271)
T PRK06505 160 GVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQR--NSPL-------RRTVTIDEVGGSAL 230 (271)
T ss_pred hhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhh--cCCc-------cccCCHHHHHHHHH
Confidence 99999998887654 48899999998864321100 0 01111111 1111 12456799999999
Q ss_pred HHhhcCCC-CCCceEEecCCc
Q 047628 206 AALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 206 ~~l~~~~~-~~~~~~~v~~~~ 225 (327)
.++..... ..|+.+.+.++.
T Consensus 231 fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 231 YLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred HHhCccccccCceEEeecCCc
Confidence 99875432 257888887764
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=120.44 Aligned_cols=188 Identities=12% Similarity=0.069 Sum_probs=133.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh---c--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM---A--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~---~--~~d~vi 81 (327)
|++++||||+|.||++++++|+++|++|++++|+++... .+.. .+++++.+|+++.+++.+++ . .+|+||
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~-~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA-ALQA----LGAEALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH-HHHh----ccceEEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 368999999999999999999999999999999865432 2222 13678899999998888754 2 379999
Q ss_pred Ecccccccc----------CcchhHhhhhHHHHHHHHHHHHc---CCcceEEEEeccC-CCCCCC----chHHHhHHHHH
Q 047628 82 NLIGREYET----------RNYSFEDVNHFMAERIAGIAKEH---GGIMRFIQISCLG-ASSSSP----SRVFSTKAAAE 143 (327)
Q Consensus 82 ~~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~~~~---~~v~~~v~~Ss~~-v~~~~~----~~y~~~K~~~E 143 (327)
|++|..... .....+++|+.++.++++++... . -.+++++||.. ..+..+ ..|+.+|...+
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~ 154 (222)
T PRK06953 76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA-GGVLAVLSSRMGSIGDATGTTGWLYRASKAALN 154 (222)
T ss_pred ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc-CCeEEEEcCcccccccccCCCccccHHhHHHHH
Confidence 999875211 11347788999999999988652 1 23688888853 333222 35999999999
Q ss_pred HHHHhhC-----CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCc
Q 047628 144 EAVLREL-----PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGK 217 (327)
Q Consensus 144 ~~~~~~~-----~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~ 217 (327)
.+++.+. +++..++||.+..+... + ...+..+|.+..+..++..... ..+.
T Consensus 155 ~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~-------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK06953 155 DALRAASLQARHATCIALHPGWVRTDMGG-------------------A----QAALDPAQSVAGMRRVIAQATRRDNGR 211 (222)
T ss_pred HHHHHHhhhccCcEEEEECCCeeecCCCC-------------------C----CCCCCHHHHHHHHHHHHHhcCcccCce
Confidence 9888653 67889999987632110 0 1235668888888887765432 1344
Q ss_pred eEEecC
Q 047628 218 IYELGG 223 (327)
Q Consensus 218 ~~~v~~ 223 (327)
.|...+
T Consensus 212 ~~~~~~ 217 (222)
T PRK06953 212 FFQYDG 217 (222)
T ss_pred EEeeCC
Confidence 555554
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.1e-15 Score=143.40 Aligned_cols=189 Identities=17% Similarity=0.171 Sum_probs=137.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.+++++||||||+||+++++.|+++|++|++++|+++......... ....++.++.+|+.+++++.++++ +
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 44678999999999999999999999999999999875533222111 011368889999999998887775 4
Q ss_pred ccEEEEcccccccc----------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 77 ANVVINLIGREYET----------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 77 ~d~vi~~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+|++||+||..... .....+++|+.++.++++++ ++.+ ..++|++||.+.+...| ..|+.+|.
T Consensus 449 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~ 527 (657)
T PRK07201 449 VDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAPRFSAYVASKA 527 (657)
T ss_pred CCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCcchHHHHHH
Confidence 79999999964211 11345778888887776665 4455 57999999987765444 68999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+.+.+.+.. ++.+++++||.+..+.... .... .....+..+++|+.++..+.+.
T Consensus 528 a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~----------~~~~-------~~~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 528 ALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAP----------TKRY-------NNVPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred HHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCc----------cccc-------cCCCCCCHHHHHHHHHHHHHhC
Confidence 999988653 4999999999886432110 0000 0123577899999999988754
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.1e-14 Score=124.81 Aligned_cols=212 Identities=17% Similarity=0.075 Sum_probs=140.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC---------CCchhhhcccC-CCCCeeEEeeCCCChhHHHHHh
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC---------EDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~---------~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~ 74 (327)
++.++++||||++.||+++++.|++.|++|+++.|+. +.......... ...++..+.+|+++++++.+++
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 4568999999999999999999999999999988765 22111111111 1135778899999998887665
Q ss_pred c-------cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCC-----cceEEEEeccCCCCC
Q 047628 75 A-------KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGG-----IMRFIQISCLGASSS 130 (327)
Q Consensus 75 ~-------~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~-----v~~~v~~Ss~~v~~~ 130 (327)
+ .+|++||+||..... . -...+++|+.++..+.+++.. .+. -.++|++||......
T Consensus 84 ~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~ 163 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG 163 (286)
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcC
Confidence 3 469999999974321 1 134678899998888776642 110 138999999765433
Q ss_pred CC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHH
Q 047628 131 SP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201 (327)
Q Consensus 131 ~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 201 (327)
.+ ..|+.+|.+++.+.+.. ++++..+.|+ +..+ ............. + .........+|+|
T Consensus 164 ~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~---~~~~~~~~~~~~~--~-----~~~~~~~~pedva 232 (286)
T PRK07791 164 SVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTR---MTETVFAEMMAKP--E-----EGEFDAMAPENVS 232 (286)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCC---cchhhHHHHHhcC--c-----ccccCCCCHHHHH
Confidence 33 68999999998887653 4889999998 3211 1111111111110 1 1112346789999
Q ss_pred HHHHHHhhcCC-CCCCceEEecCCccc
Q 047628 202 AAVTAALKDDG-TSMGKIYELGGPDIF 227 (327)
Q Consensus 202 ~~~~~~l~~~~-~~~~~~~~v~~~~~~ 227 (327)
.+++.++.... ...|+.+.+.++...
T Consensus 233 ~~~~~L~s~~~~~itG~~i~vdgG~~~ 259 (286)
T PRK07791 233 PLVVWLGSAESRDVTGKVFEVEGGKIS 259 (286)
T ss_pred HHHHHHhCchhcCCCCcEEEEcCCceE
Confidence 99999887533 226888888876543
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-15 Score=143.41 Aligned_cols=157 Identities=18% Similarity=0.139 Sum_probs=119.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhcc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMAK----- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----- 76 (327)
+..+++|||||+|+||++++++|+++|++|++++|+.++.... ++..+ .++.++.+|+++++++.++++.
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 390 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAG--AVAHAYRVDVSDADAMEAFAEWVRAEH 390 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4467899999999999999999999999999999986543322 11222 3688999999999988877753
Q ss_pred --ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 77 --ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 77 --~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+|++||+||..... + -...+++|+.++.++++++. +.+.-.++|++||...+...+ ..|+.+|.
T Consensus 391 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa 470 (582)
T PRK05855 391 GVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKA 470 (582)
T ss_pred CCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHH
Confidence 79999999985321 1 13456789999888888653 333124899999987765444 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeec
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIG 163 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G 163 (327)
+.+.+.+.. ++++++++||.+-.
T Consensus 471 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t 500 (582)
T PRK05855 471 AVLMLSECLRAELAAAGIGVTAICPGFVDT 500 (582)
T ss_pred HHHHHHHHHHHHhcccCcEEEEEEeCCCcc
Confidence 988876543 48999999998753
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.6e-14 Score=122.47 Aligned_cols=214 Identities=16% Similarity=0.165 Sum_probs=139.4
Q ss_pred CCcccCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc--
Q 047628 1 MTYVYSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
|.+ +++++++||||++ -||+++++.|+++|++|++..|+. +......+.. ..+.+..+.+|++|++++.++++
T Consensus 1 ~~~-l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 78 (262)
T PRK07984 1 MGF-LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAEL 78 (262)
T ss_pred Ccc-cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHH
Confidence 444 4568999999985 899999999999999999888863 2112222111 11346678999999998887664
Q ss_pred -----cccEEEEcccccccc----------Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--ch
Q 047628 76 -----KANVVINLIGREYET----------RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SR 134 (327)
Q Consensus 76 -----~~d~vi~~a~~~~~~----------~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~ 134 (327)
.+|++||+||..... .. ...+++|+.+...+.+++...- +-.++|++||.+.....| ..
T Consensus 79 ~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~ 158 (262)
T PRK07984 79 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNV 158 (262)
T ss_pred HhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcch
Confidence 369999999864321 11 1345678877777777654320 014789999876543333 67
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh---hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR---LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
|+.+|.+.+.+.+.. ++++..+.||.+--+... ........... ..+ ...+...+|++.++
T Consensus 159 Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~--~~p-------~~r~~~pedva~~~ 229 (262)
T PRK07984 159 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEA--VTP-------IRRTVTIEDVGNSA 229 (262)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHH--cCC-------CcCCCCHHHHHHHH
Confidence 999999999888754 388899999987532100 00011111111 111 12356779999999
Q ss_pred HHHhhcCC-CCCCceEEecCCc
Q 047628 205 TAALKDDG-TSMGKIYELGGPD 225 (327)
Q Consensus 205 ~~~l~~~~-~~~~~~~~v~~~~ 225 (327)
+.++.... ...|+.+.+.++.
T Consensus 230 ~~L~s~~~~~itG~~i~vdgg~ 251 (262)
T PRK07984 230 AFLCSDLSAGISGEVVHVDGGF 251 (262)
T ss_pred HHHcCcccccccCcEEEECCCc
Confidence 99987533 2267788887764
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.64 E-value=7.1e-15 Score=117.01 Aligned_cols=212 Identities=21% Similarity=0.236 Sum_probs=158.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
-+.++.|+.||.|+++++.....+++|-.+.|+..+.. +..+. ..+.+.++|....+-+...+.++..++.+++..
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~--l~sw~--~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf 128 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQT--LSSWP--TYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF 128 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcch--hhCCC--cccchhhccccccCcchhhhcCCcccHHHhcCc
Confidence 35789999999999999999999999999999866432 22222 357778888777666777788899999888754
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC--CCCCCCchHHHhHHHHHHHHHhh-CCCeEEEecCeeecC
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG--ASSSSPSRVFSTKAAAEEAVLRE-LPWATIMRPAAMIGT 164 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~--v~~~~~~~y~~~K~~~E~~~~~~-~~~~~i~r~~~~~G~ 164 (327)
. ....+.++|-+...+.++++.+.| |++|+|+|... ..+..|..|...|+++|..+.+. ..+-+++|||.+||.
T Consensus 129 g--n~~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d~~~~~~i~rGY~~gKR~AE~Ell~~~~~rgiilRPGFiyg~ 205 (283)
T KOG4288|consen 129 G--NIILMDRINGTANINAVKAAAKAG-VPRFVYISAHDFGLPPLIPRGYIEGKREAEAELLKKFRFRGIILRPGFIYGT 205 (283)
T ss_pred c--chHHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhhcCCCCccchhhhccchHHHHHHHHhcCCCceeeccceeecc
Confidence 3 234577788888888999999999 99999999853 35556689999999999998775 489999999999997
Q ss_pred CC------------hhHHHHHHHHh-hcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHH
Q 047628 165 ED------------RLLNKWAQFVK-KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHE 231 (327)
Q Consensus 165 ~~------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~e 231 (327)
.. ..+....+.+. ....+++. +.....++.++++|.+.+.+++++.. . ..+++.|
T Consensus 206 R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~l--g~l~~ppvnve~VA~aal~ai~dp~f-~---------Gvv~i~e 273 (283)
T KOG4288|consen 206 RNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLL--GPLLAPPVNVESVALAALKAIEDPDF-K---------GVVTIEE 273 (283)
T ss_pred cccCcccccHHhhhhhHHHHHHhhhchhhcCccc--ccccCCCcCHHHHHHHHHHhccCCCc-C---------ceeeHHH
Confidence 32 01222222221 11235554 34567889999999999999999986 3 3567777
Q ss_pred HHHHHHH
Q 047628 232 LAELMYD 238 (327)
Q Consensus 232 l~~~i~~ 238 (327)
+.+.-.+
T Consensus 274 I~~~a~k 280 (283)
T KOG4288|consen 274 IKKAAHK 280 (283)
T ss_pred HHHHHHH
Confidence 6665443
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=5.6e-15 Score=123.89 Aligned_cols=152 Identities=18% Similarity=0.093 Sum_probs=112.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-----KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~~d~vi 81 (327)
|++++||||+|++|++++++|+++|++|++++|+++... .+... .++.++.+|++|++++.++++ ++|+||
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi 76 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT-ALQAL---PGVHIEKLDMNDPASLDQLLQRLQGQRFDLLF 76 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH-HHHhc---cccceEEcCCCCHHHHHHHHHHhhcCCCCEEE
Confidence 368999999999999999999999999999999876632 22222 257788999999988877665 479999
Q ss_pred Ecccccccc----------CcchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCC-CCC---C-chHHHhHHHHHH
Q 047628 82 NLIGREYET----------RNYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGAS-SSS---P-SRVFSTKAAAEE 144 (327)
Q Consensus 82 ~~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~-~~~---~-~~y~~~K~~~E~ 144 (327)
|++|..... .....+.+|+.++..+++++...- ...+++++||.... +.. + ..|+.+|.+.+.
T Consensus 77 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~ 156 (225)
T PRK08177 77 VNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNS 156 (225)
T ss_pred EcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHH
Confidence 999874221 012355678888888888775431 02478888874322 111 1 469999999999
Q ss_pred HHHhh-------CCCeEEEecCeee
Q 047628 145 AVLRE-------LPWATIMRPAAMI 162 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~ 162 (327)
+++.+ ++.+..++||.+-
T Consensus 157 ~~~~l~~e~~~~~i~v~~i~PG~i~ 181 (225)
T PRK08177 157 MTRSFVAELGEPTLTVLSMHPGWVK 181 (225)
T ss_pred HHHHHHHHhhcCCeEEEEEcCCcee
Confidence 98764 2778999999875
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.5e-14 Score=122.49 Aligned_cols=209 Identities=17% Similarity=0.154 Sum_probs=139.6
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCch--hhhcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDP--RHLKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+..+.++||||+ +-||++++++|+++|++|++..|+..... ..+... ...+.++++|+++++++.++++
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~ 85 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEE--LDAPIFLPLDVREPGQLEAVFARIAEE 85 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHh--hccceEEecCcCCHHHHHHHHHHHHHH
Confidence 456899999998 48999999999999999999998754311 111111 1235678999999988876653
Q ss_pred --cccEEEEcccccccc---------Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 --KANVVINLIGREYET---------RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~---------~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
.+|++||+||..... +. ...+++|+.++..+.+++...- +-.++|++||.......+ ..|+.+
T Consensus 86 ~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~as 165 (258)
T PRK07533 86 WGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPV 165 (258)
T ss_pred cCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHH
Confidence 369999999874310 11 3467889988888888765421 013789999876543333 679999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
|.+.+.+.+.. ++.+..+.||.+-.+-... .......... ..+. ..+...+|+|++++.++
T Consensus 166 Kaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~p~dva~~~~~L~ 236 (258)
T PRK07533 166 KAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAE--RAPL-------RRLVDIDDVGAVAAFLA 236 (258)
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHh--cCCc-------CCCCCHHHHHHHHHHHh
Confidence 99998877653 4889999999885431100 1111111111 1111 23567799999999998
Q ss_pred hcCC-CCCCceEEecCC
Q 047628 209 KDDG-TSMGKIYELGGP 224 (327)
Q Consensus 209 ~~~~-~~~~~~~~v~~~ 224 (327)
.... ...|+.+.+.++
T Consensus 237 s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 237 SDAARRLTGNTLYIDGG 253 (258)
T ss_pred ChhhccccCcEEeeCCc
Confidence 7532 226778887765
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=5.1e-14 Score=120.43 Aligned_cols=215 Identities=13% Similarity=0.103 Sum_probs=140.5
Q ss_pred CCcccCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCc--hhhhcccCCCCCeeEEeeCCCChhHHHHHhc-
Q 047628 1 MTYVYSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHLKLMGDLGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
|...+..++++||||+ +-||.+++++|+++|++|+++.|+.... ...+....+..++..+++|++|++++.++++
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 80 (257)
T PRK08594 1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET 80 (257)
T ss_pred CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence 3344567899999997 8999999999999999999998764321 1112111111357889999999988876664
Q ss_pred ------cccEEEEccccccc----c-----Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--ch
Q 047628 76 ------KANVVINLIGREYE----T-----RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SR 134 (327)
Q Consensus 76 ------~~d~vi~~a~~~~~----~-----~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~ 134 (327)
.+|++||+||.... . +. ...+++|+.+...+.+++...- +-.++|++||.......| ..
T Consensus 81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~ 160 (257)
T PRK08594 81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNV 160 (257)
T ss_pred HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCch
Confidence 36999999986421 0 11 1245677777777776665421 014899999976543333 68
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
|+.+|.+.+.+.+.. ++++..+.||.+-.+..... ........ ...+ ...+...+|+|+++
T Consensus 161 Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~p-------~~r~~~p~~va~~~ 231 (257)
T PRK08594 161 MGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIE--ERAP-------LRRTTTQEEVGDTA 231 (257)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHh--hcCC-------ccccCCHHHHHHHH
Confidence 999999999887654 48899999998864311000 00000011 0011 12346789999999
Q ss_pred HHHhhcCCC-CCCceEEecCC
Q 047628 205 TAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 205 ~~~l~~~~~-~~~~~~~v~~~ 224 (327)
+.++..... ..|+.+.+.++
T Consensus 232 ~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 232 AFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred HHHcCcccccccceEEEECCc
Confidence 998875432 25778888765
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.3e-14 Score=124.02 Aligned_cols=201 Identities=15% Similarity=0.073 Sum_probs=129.4
Q ss_pred EEEEEcCCCccHHHHHHHHHh----CCCEEEEeeCCCCCchhhhcccC---CCCCeeEEeeCCCChhHHHHHhcc-----
Q 047628 9 IATVFGTTGFLGRYVVQQLAK----MGSQVLVPFRGCEDDPRHLKLMG---DLGQIVPMKFNPRDDNTIKATMAK----- 76 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~~~~~~~~----- 76 (327)
.++||||++.||.+++++|++ .|++|+++.|+.+.......... ...++.++.+|+++++++.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999997 79999999998765432222211 113578899999999988776642
Q ss_pred ------ccEEEEccccccc----cC---c----chhHhhhhHHHHHHHHHHHH----c-CCcceEEEEeccCCCCCCC--
Q 047628 77 ------ANVVINLIGREYE----TR---N----YSFEDVNHFMAERIAGIAKE----H-GGIMRFIQISCLGASSSSP-- 132 (327)
Q Consensus 77 ------~d~vi~~a~~~~~----~~---~----~~~~~~n~~~~~~l~~a~~~----~-~~v~~~v~~Ss~~v~~~~~-- 132 (327)
.|+|||+||.... .. . ...+++|+.++..+.+++.. . +.-.++|++||.......+
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~ 161 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW 161 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence 1589999986321 11 1 24678898887777766543 2 2124799999976654433
Q ss_pred chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 133 SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 133 ~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
..|+.+|.+.+.+.+.. ++.+..+.||.+-.+ ....+............+......-.+...+|+|..++
T Consensus 162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~ 238 (256)
T TIGR01500 162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTD---MQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLL 238 (256)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccch---HHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHH
Confidence 67999999999888654 378888999987532 11111100000000000000000113567899999999
Q ss_pred HHhhcCC
Q 047628 206 AALKDDG 212 (327)
Q Consensus 206 ~~l~~~~ 212 (327)
.++++..
T Consensus 239 ~l~~~~~ 245 (256)
T TIGR01500 239 SLLEKDK 245 (256)
T ss_pred HHHhcCC
Confidence 9996443
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.5e-13 Score=117.51 Aligned_cols=206 Identities=14% Similarity=0.113 Sum_probs=136.1
Q ss_pred cCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCC--------Cch------hhhcccCCCCCeeEEeeCCCChh
Q 047628 5 YSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCE--------DDP------RHLKLMGDLGQIVPMKFNPRDDN 68 (327)
Q Consensus 5 ~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~--------~~~------~~~~~~~~~~~v~~~~~Dl~~~~ 68 (327)
+.+++++|||||| .||++++++|+++|++|+++.|... ... ..+...+ .++..+++|+++++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~ 81 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNG--VKVSSMELDLTQND 81 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcC--CeEEEEEcCCCCHH
Confidence 4568999999995 7999999999999999988754311 000 0111111 35788899999999
Q ss_pred HHHHHhc-------cccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCC
Q 047628 69 TIKATMA-------KANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASS 129 (327)
Q Consensus 69 ~~~~~~~-------~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~ 129 (327)
++.++++ .+|++||++|..... .. ...+++|+.+...+.+++ ++.+ -.+||++||.....
T Consensus 82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~ 160 (256)
T PRK12859 82 APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQG 160 (256)
T ss_pred HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCC
Confidence 8877764 369999999864321 11 235778888877775443 3333 35899999987654
Q ss_pred CCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 130 SSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 130 ~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
..+ ..|+.+|.+++.+.+.. +++++.++||.+-.+... ......... ..++ ..+...+|+
T Consensus 161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~--~~~~~~~~~--~~~~-------~~~~~~~d~ 229 (256)
T PRK12859 161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT--EEIKQGLLP--MFPF-------GRIGEPKDA 229 (256)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC--HHHHHHHHh--cCCC-------CCCcCHHHH
Confidence 333 78999999998886553 488999999987543211 111111111 1111 123567999
Q ss_pred HHHHHHHhhcCCC-CCCceEEecCC
Q 047628 201 AAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 201 a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
|+++..++..... ..|+++.+.++
T Consensus 230 a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 230 ARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred HHHHHHHhCccccCccCcEEEeCCC
Confidence 9999988875432 25777777664
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=4.1e-14 Score=122.05 Aligned_cols=211 Identities=12% Similarity=0.084 Sum_probs=139.3
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCc--hhhh-cccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRHL-KLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~~-~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
+..+.++||||+ +-||+.+++.|+++|++|++..|+.... ...+ ...+ .. ..+++|++|++++.++++
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~--~~-~~~~~Dv~d~~~v~~~~~~i~~ 79 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELG--SD-YVYELDVSKPEHFKSLAESLKK 79 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC--Cc-eEEEecCCCHHHHHHHHHHHHH
Confidence 456899999997 7999999999999999999998874211 1111 1122 12 578999999998877654
Q ss_pred ---cccEEEEccccccc---------cCc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ---KANVVINLIGREYE---------TRN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~---------~~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
.+|++||+||.... .+. ...+++|+.++..+.+++...= +-.++|++||.......| ..|+.
T Consensus 80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~a 159 (274)
T PRK08415 80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGV 159 (274)
T ss_pred HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhh
Confidence 36999999997421 011 2467889988888887765421 014899999976544333 67999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh-cCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK-FNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|.+.+.+.+.. ++++..+.||.+-.+.............. ....+. ..+...+|+|++++.++.
T Consensus 160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl-------~r~~~pedva~~v~fL~s 232 (274)
T PRK08415 160 AKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL-------KKNVSIEEVGNSGMYLLS 232 (274)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch-------hccCCHHHHHHHHHHHhh
Confidence 999998887654 48889999998864211000000000000 000111 234678999999999987
Q ss_pred cCC-CCCCceEEecCCc
Q 047628 210 DDG-TSMGKIYELGGPD 225 (327)
Q Consensus 210 ~~~-~~~~~~~~v~~~~ 225 (327)
... ...|+.+.+.++.
T Consensus 233 ~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 233 DLSSGVTGEIHYVDAGY 249 (274)
T ss_pred hhhhcccccEEEEcCcc
Confidence 543 2267888888764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.5e-14 Score=127.18 Aligned_cols=158 Identities=17% Similarity=0.097 Sum_probs=114.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc---cCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---MGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+++++++||||||.||.+++++|+++|++|+++.|+.++....... .....++.++.+|+.+.+++.++++
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 4568999999999999999999999999999999987653332221 1111358889999999998877664
Q ss_pred -cccEEEEcccccccc----C---cchhHhhhhHHHHHHHHHHHH---cCCcceEEEEeccCCCCC-------------C
Q 047628 76 -KANVVINLIGREYET----R---NYSFEDVNHFMAERIAGIAKE---HGGIMRFIQISCLGASSS-------------S 131 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~----~---~~~~~~~n~~~~~~l~~a~~~---~~~v~~~v~~Ss~~v~~~-------------~ 131 (327)
.+|++||+||..... . -+..+.+|+.+...+.+.+.. .+ -.++|++||...... .
T Consensus 92 ~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~~~~~~~ 170 (313)
T PRK05854 92 RPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLNWERSYA 170 (313)
T ss_pred CCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCcccccccccCc
Confidence 379999999975321 1 134678888887777666542 22 258999998643211 1
Q ss_pred -CchHHHhHHHHHHHHHhh---------CCCeEEEecCeeec
Q 047628 132 -PSRVFSTKAAAEEAVLRE---------LPWATIMRPAAMIG 163 (327)
Q Consensus 132 -~~~y~~~K~~~E~~~~~~---------~~~~~i~r~~~~~G 163 (327)
...|+.+|.+.+.+.+.. ++.+..+.||.+-.
T Consensus 171 ~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T 212 (313)
T PRK05854 171 GMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPT 212 (313)
T ss_pred chhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceecc
Confidence 157999999988877543 37889999998853
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.7e-14 Score=130.46 Aligned_cols=208 Identities=15% Similarity=0.093 Sum_probs=137.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
..++++||||+|.||..+++.|.++|++|++++|..... ...+... -+...+.+|+++++++.++++ .+
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~---~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 285 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR---VGGTALALDITAPDAPARIAEHLAERHGGL 285 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH---cCCeEEEEeCCCHHHHHHHHHHHHHhCCCC
Confidence 457899999999999999999999999999998853321 1111111 124678999999988877664 47
Q ss_pred cEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHcC---CcceEEEEeccCCCCC--CCchHHHhHHHHHH
Q 047628 78 NVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEHG---GIMRFIQISCLGASSS--SPSRVFSTKAAAEE 144 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~~---~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E~ 144 (327)
|+|||++|..... + -...+++|+.++.++.+++.... +-.+||++||...... ....|+.+|...+.
T Consensus 286 d~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~ 365 (450)
T PRK08261 286 DIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIG 365 (450)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHH
Confidence 9999999975321 1 13467889999999999987643 0258999998754322 23789999998777
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMG 216 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~ 216 (327)
+++.. ++.+..+.||.+-.+....++.......+ ...++ .......|+|+++..++..... ..|
T Consensus 366 ~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~-~~~~l-------~~~~~p~dva~~~~~l~s~~~~~itG 437 (450)
T PRK08261 366 LVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGR-RMNSL-------QQGGLPVDVAETIAWLASPASGGVTG 437 (450)
T ss_pred HHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHh-hcCCc-------CCCCCHHHHHHHHHHHhChhhcCCCC
Confidence 76543 48899999997642211111110011110 00011 1123457999999988875332 257
Q ss_pred ceEEecCC
Q 047628 217 KIYELGGP 224 (327)
Q Consensus 217 ~~~~v~~~ 224 (327)
+++.++++
T Consensus 438 ~~i~v~g~ 445 (450)
T PRK08261 438 NVVRVCGQ 445 (450)
T ss_pred CEEEECCC
Confidence 88888773
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.6e-14 Score=120.05 Aligned_cols=210 Identities=15% Similarity=0.167 Sum_probs=137.4
Q ss_pred cCCcEEEEEcC--CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGT--TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~Ga--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.+.++|||| ++-||++++++|+++|++|++..|... ....+.+.. .......+++|++|++++.++++
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK-LEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH-HHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHh
Confidence 44679999997 679999999999999999998877532 122222111 11234578999999998877663
Q ss_pred -cccEEEEcccccccc---------Cc----chhHhhhhHHHHHHHHHHHHc---CCcceEEEEeccCCCCCCC--chHH
Q 047628 76 -KANVVINLIGREYET---------RN----YSFEDVNHFMAERIAGIAKEH---GGIMRFIQISCLGASSSSP--SRVF 136 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~---------~~----~~~~~~n~~~~~~l~~a~~~~---~~v~~~v~~Ss~~v~~~~~--~~y~ 136 (327)
.+|++||+||..... .+ ...+++|+.++..+.+++... + -.++|++||.+.....| ..|+
T Consensus 83 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~~~~~~~~~~Y~ 161 (261)
T PRK08690 83 DGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGAVRAIPNYNVMG 161 (261)
T ss_pred CCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEcccccccCCCCcccch
Confidence 479999999975321 11 123466777776766654321 1 24799999876653333 6799
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-h--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-L--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
.+|.+.+.+.+.. ++++..+.||.+-.+... . .........+ ..+. ..+...+|+|++++.
T Consensus 162 asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~peevA~~v~~ 232 (261)
T PRK08690 162 MAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAA--HNPL-------RRNVTIEEVGNTAAF 232 (261)
T ss_pred hHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhh--cCCC-------CCCCCHHHHHHHHHH
Confidence 9999998877643 488999999988533110 0 0111111111 1111 235678999999999
Q ss_pred HhhcCCC-CCCceEEecCCc
Q 047628 207 ALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~ 225 (327)
++..... ..|+.+.+.++.
T Consensus 233 l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 233 LLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred HhCcccCCcceeEEEEcCCc
Confidence 9985432 267888887764
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=4e-14 Score=122.07 Aligned_cols=213 Identities=15% Similarity=0.174 Sum_probs=140.9
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
|..++++||||+ +-||.++++.|+++|++|++..|+... ...++... .......+++|+++++++.++++
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~-~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL-KKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH-HHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 456889999997 799999999999999999988876321 11221110 11235578999999998887654
Q ss_pred -cccEEEEccccccc---------cCc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYE---------TRN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~---------~~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+||.... .+. ...+++|+.++..+++++...- +-.++|++||.+.....| ..|+.+|
T Consensus 87 g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asK 166 (272)
T PRK08159 87 GKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAK 166 (272)
T ss_pred CCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHH
Confidence 36999999987431 011 3466889999998888776531 024889999876554334 6799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHH--HHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKW--AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.+.. ++++..+.||.+-.+.......+ ...... ...+. ..+...+|+|++++.++..
T Consensus 167 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~-~~~p~-------~r~~~peevA~~~~~L~s~ 238 (272)
T PRK08159 167 AALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNE-YNAPL-------RRTVTIEEVGDSALYLLSD 238 (272)
T ss_pred HHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHH-hCCcc-------cccCCHHHHHHHHHHHhCc
Confidence 9998887654 38889999998753210000000 000000 01111 1346789999999999975
Q ss_pred CCC-CCCceEEecCCcc
Q 047628 211 DGT-SMGKIYELGGPDI 226 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~ 226 (327)
... ..|+.+.+.++..
T Consensus 239 ~~~~itG~~i~vdgG~~ 255 (272)
T PRK08159 239 LSRGVTGEVHHVDSGYH 255 (272)
T ss_pred cccCccceEEEECCCce
Confidence 432 2678888888643
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.60 E-value=5.5e-14 Score=120.32 Aligned_cols=212 Identities=15% Similarity=0.140 Sum_probs=140.2
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCC--chhhhcccC-CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCED--DPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~--~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
++.++++||||+ +-||++++++|++.|++|++..|+.+. ....+.+.. ...++.++++|++|++++.++++
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 456889999986 799999999999999999888775432 112222111 11246788999999998877664
Q ss_pred ---cccEEEEccccccc----c-----Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ---KANVVINLIGREYE----T-----RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~----~-----~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
.+|++||++|.... . +. ...+++|+.++..+.+++...- +-.++|++||.......| ..|+.
T Consensus 84 ~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~a 163 (258)
T PRK07370 84 KWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGV 163 (258)
T ss_pred HcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhH
Confidence 37999999996421 0 11 3466788888888877764321 014899999976543333 67999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+|.+.+.+.+.. ++.+..+.||.+-.+..... +........ ..+ ...+...+|++.++..+
T Consensus 164 sKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~--~~p-------~~r~~~~~dva~~~~fl 234 (258)
T PRK07370 164 AKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEE--KAP-------LRRTVTQTEVGNTAAFL 234 (258)
T ss_pred HHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhh--cCC-------cCcCCCHHHHHHHHHHH
Confidence 999999888764 38899999998854311100 011111110 011 12356679999999999
Q ss_pred hhcCCC-CCCceEEecCCc
Q 047628 208 LKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~ 225 (327)
+..... ..|+.+.+.++.
T Consensus 235 ~s~~~~~~tG~~i~vdgg~ 253 (258)
T PRK07370 235 LSDLASGITGQTIYVDAGY 253 (258)
T ss_pred hChhhccccCcEEEECCcc
Confidence 875432 257788887653
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=7.2e-15 Score=116.67 Aligned_cols=232 Identities=13% Similarity=0.069 Sum_probs=152.1
Q ss_pred CCcEEEEEcCCCccHHHHHH-----HHHhC----CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQ-----QLAKM----GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~-----~Ll~~----g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~ 76 (327)
++.+.++-+++|+|+.+|.. ++-.. .|+|++++|.+.+.. +.+-+.|..-.. -.
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~r-----------itw~el~~~Gip------~s 73 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKAR-----------ITWPELDFPGIP------IS 73 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcc-----------cccchhcCCCCc------ee
Confidence 34678888999999988876 22222 389999999988743 222222211100 02
Q ss_pred ccEEEEcccc----c-cccCc---chhHhhhhHHHHHHHHHHHHcCC-cceEEEEeccCCCCCCC------------chH
Q 047628 77 ANVVINLIGR----E-YETRN---YSFEDVNHFMAERIAGIAKEHGG-IMRFIQISCLGASSSSP------------SRV 135 (327)
Q Consensus 77 ~d~vi~~a~~----~-~~~~~---~~~~~~n~~~~~~l~~a~~~~~~-v~~~v~~Ss~~v~~~~~------------~~y 135 (327)
||++++.++. + ...++ .+.....+..+..|+++..++.. .+.+|.+|...+|..+. ..|
T Consensus 74 c~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgfd~ 153 (315)
T KOG3019|consen 74 CVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGFDI 153 (315)
T ss_pred hHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCChHH
Confidence 3444444433 1 11111 23334456678899999988764 34688888877654332 112
Q ss_pred H-HhHHHHHHHHHhhC--CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 136 F-STKAAAEEAVLREL--PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 136 ~-~~K~~~E~~~~~~~--~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
. .--.+=|...+..+ .+.+++|.|.+.|.+.+.+..+.-..+-+---|+ |+|.+.++|||++|++..+..+++++.
T Consensus 154 ~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPl-GsG~Q~fpWIHv~DL~~li~~ale~~~ 232 (315)
T KOG3019|consen 154 LSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPL-GSGQQWFPWIHVDDLVNLIYEALENPS 232 (315)
T ss_pred HHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcC-CCCCeeeeeeehHHHHHHHHHHHhcCC
Confidence 2 21122233333332 8899999999999988766554433321211232 789999999999999999999999987
Q ss_pred CCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhh
Q 047628 213 TSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVA 258 (327)
Q Consensus 213 ~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~ 258 (327)
- ..+.|-..|++.+..|+.+.++++++++ .+.++|+...+...
T Consensus 233 v--~GViNgvAP~~~~n~Ef~q~lg~aL~Rp-~~~pvP~fvvqA~f 275 (315)
T KOG3019|consen 233 V--KGVINGVAPNPVRNGEFCQQLGSALSRP-SWLPVPDFVVQALF 275 (315)
T ss_pred C--CceecccCCCccchHHHHHHHHHHhCCC-cccCCcHHHHHHHh
Confidence 5 5699999999999999999999999865 45778876666544
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.59 E-value=5.3e-14 Score=132.65 Aligned_cols=194 Identities=20% Similarity=0.163 Sum_probs=134.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
..++++||||++.||.+++++|+++|++|+++.|+.++........+ .++..+++|+++++++.++++ .+|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG--PDHHALAMDVSDEAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEeccCCHHHHHHHHHHHHHHhCCCC
Confidence 45789999999999999999999999999999998766443333332 357789999999998877664 379
Q ss_pred EEEEccccccc-------cC---cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 79 VVINLIGREYE-------TR---NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 79 ~vi~~a~~~~~-------~~---~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
++||+||.... .+ -...+++|+.++..+++++... +.-.++|++||.......+ ..|+.+|.+.
T Consensus 82 ~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal 161 (520)
T PRK06484 82 VLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAV 161 (520)
T ss_pred EEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHH
Confidence 99999986311 11 1356788999988888877543 2113899999976654333 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhH-H--HH-HHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLL-N--KW-AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~--~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+.. +++++.+.||.+-.+..... . .. ..... ..++ ...+...+|+++++..++..
T Consensus 162 ~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~-------~~~~~~~~~va~~v~~l~~~ 231 (520)
T PRK06484 162 ISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVR--SRIP-------LGRLGRPEEIAEAVFFLASD 231 (520)
T ss_pred HHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHH--hcCC-------CCCCcCHHHHHHHHHHHhCc
Confidence 9887653 48899999997753321100 0 00 00000 0011 11245779999999988764
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.3e-13 Score=118.04 Aligned_cols=211 Identities=17% Similarity=0.168 Sum_probs=138.2
Q ss_pred cCCcEEEEEcC--CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGT--TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~Ga--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.++++|||| ++-||.+++++|++.|++|++..|.... ...+... ...+....+.+|++|++++.++++
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHh
Confidence 44689999996 6799999999999999999988664221 1111111 001123468999999998887764
Q ss_pred -cccEEEEcccccccc----------Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 -KANVVINLIGREYET----------RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~----------~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
.+|++||+||..... +. ...+++|+.++..+.+++...- +-.++|++||.......| ..|+.+
T Consensus 83 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~as 162 (260)
T PRK06997 83 DGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLA 162 (260)
T ss_pred CCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHH
Confidence 379999999874311 11 1356788888888887765431 024799999976643333 679999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCCh-h--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-L--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
|.+.+.+.+.. ++++..+.||.+-.+... . .......+.. ..+. ..+...+|+++++..++
T Consensus 163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~pedva~~~~~l~ 233 (260)
T PRK06997 163 KASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVES--NAPL-------RRNVTIEEVGNVAAFLL 233 (260)
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHh--cCcc-------cccCCHHHHHHHHHHHh
Confidence 99998887654 388899999987532110 0 0111111111 1111 13467899999999998
Q ss_pred hcCCC-CCCceEEecCCc
Q 047628 209 KDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~ 225 (327)
..... ..|+++.+.++.
T Consensus 234 s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 234 SDLASGVTGEITHVDSGF 251 (260)
T ss_pred CccccCcceeEEEEcCCh
Confidence 86432 267888887753
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.4e-13 Score=116.22 Aligned_cols=212 Identities=13% Similarity=0.046 Sum_probs=137.9
Q ss_pred cccCCcEEEEEcC--CCccHHHHHHHHHhCCCEEEEeeCCCC-Cchhhhc-ccCCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 3 YVYSGIIATVFGT--TGFLGRYVVQQLAKMGSQVLVPFRGCE-DDPRHLK-LMGDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 3 ~~~~~~~ilI~Ga--tG~iG~~l~~~Ll~~g~~V~~~~R~~~-~~~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
..+..++++|||| ++-||.++++.|+++|++|+++.|+.. .....+. ..+ .++.++++|+++++++.++++
T Consensus 3 ~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~i~~~~~~~~ 80 (256)
T PRK07889 3 GLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP--EPAPVLELDVTNEEHLASLADRVR 80 (256)
T ss_pred ccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC--CCCcEEeCCCCCHHHHHHHHHHHH
Confidence 3455689999999 899999999999999999999988642 2112221 122 247789999999988876653
Q ss_pred ----cccEEEEccccccc--------c-Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCC-CCCchHHH
Q 047628 76 ----KANVVINLIGREYE--------T-RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASS-SSPSRVFS 137 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~--------~-~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~-~~~~~y~~ 137 (327)
.+|++||+||.... . +. ...+++|+.++..+.+++...= +-.++|++|+.+... .....|+.
T Consensus 81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~~~~~~~Y~a 160 (256)
T PRK07889 81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVAWPAYDWMGV 160 (256)
T ss_pred HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccccCCccchhHH
Confidence 47999999987521 0 11 1246888888887777665321 013788887654321 12256899
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+|.+.+.+.+.. ++++..+.||.+-.+..... ........+ ..+. ...+...+|+|++++.+
T Consensus 161 sKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~p~------~~~~~~p~evA~~v~~l 232 (256)
T PRK07889 161 AKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDE--RAPL------GWDVKDPTPVARAVVAL 232 (256)
T ss_pred HHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHh--cCcc------ccccCCHHHHHHHHHHH
Confidence 999998887653 48889999998853311000 011111111 0111 01356789999999999
Q ss_pred hhcCCC-CCCceEEecCC
Q 047628 208 LKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~ 224 (327)
+..... ..|+++.+.++
T Consensus 233 ~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 233 LSDWFPATTGEIVHVDGG 250 (256)
T ss_pred hCcccccccceEEEEcCc
Confidence 876432 26778888765
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.1e-13 Score=118.53 Aligned_cols=211 Identities=11% Similarity=0.086 Sum_probs=137.7
Q ss_pred cCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.+.++||||++ -||.++++.|+++|++|++..|+.. ....+.... .......+++|++|++++.++++
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~-~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV-LEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH-HHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 4568899999997 7999999999999999999888632 111122111 00123457899999998877664
Q ss_pred -cccEEEEccccccc--------c-Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYE--------T-RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~--------~-~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+++.... + +. ...+++|+.+...+++++...- +-.++|++||.......| ..|+.+|
T Consensus 85 g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asK 164 (260)
T PRK06603 85 GSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAK 164 (260)
T ss_pred CCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHH
Confidence 37999999986421 0 11 2366788888888877654321 014899999976543333 6799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.+.+.+.. ++.+..+.||.+-.+.... .......... ..+. ..+...+|+|++++.++.
T Consensus 165 aal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~pedva~~~~~L~s 235 (260)
T PRK06603 165 AALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAA--TAPL-------KRNTTQEDVGGAAVYLFS 235 (260)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHh--cCCc-------CCCCCHHHHHHHHHHHhC
Confidence 9998887653 4889999999885331100 0111111111 1111 134677999999999997
Q ss_pred cCCC-CCCceEEecCCc
Q 047628 210 DDGT-SMGKIYELGGPD 225 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~ 225 (327)
.... ..|+.+.+.++-
T Consensus 236 ~~~~~itG~~i~vdgG~ 252 (260)
T PRK06603 236 ELSKGVTGEIHYVDCGY 252 (260)
T ss_pred cccccCcceEEEeCCcc
Confidence 6432 267788887753
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.58 E-value=4.7e-14 Score=113.41 Aligned_cols=153 Identities=16% Similarity=0.082 Sum_probs=113.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhh---ccc-CCCCCeeEEeeCCCChhHHHHHhcc------
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHL---KLM-GDLGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~---~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
++++|+||+|+||.++++.|+++|. .|+++.|+........ ... ....++.++.+|+++++.+.++++.
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999986 6888888765432111 111 1113577889999998888776543
Q ss_pred -ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--CchHHHhHHHHHHH
Q 047628 77 -ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--PSRVFSTKAAAEEA 145 (327)
Q Consensus 77 -~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E~~ 145 (327)
+|.|||+++..... .....+++|+.++.+++++++..+ .++++++||....... ...|+.+|...+.+
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~ 159 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGNPGQANYAAANAFLDAL 159 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCCCCchhhHHHHHHHHHH
Confidence 59999999864221 113467889999999999998877 7899999997553222 36799999999998
Q ss_pred HHhh---CCCeEEEecCee
Q 047628 146 VLRE---LPWATIMRPAAM 161 (327)
Q Consensus 146 ~~~~---~~~~~i~r~~~~ 161 (327)
.+.. +++.+.+.|+.+
T Consensus 160 ~~~~~~~~~~~~~~~~g~~ 178 (180)
T smart00822 160 AAHRRARGLPATSINWGAW 178 (180)
T ss_pred HHHHHhcCCceEEEeeccc
Confidence 7653 488888888765
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.4e-13 Score=121.22 Aligned_cols=184 Identities=18% Similarity=0.079 Sum_probs=127.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc---cCCCCCeeEEeeCCCC--hhHH---HHHhcc--
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---MGDLGQIVPMKFNPRD--DNTI---KATMAK-- 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~v~~~~~Dl~~--~~~~---~~~~~~-- 76 (327)
++.++||||||.||++++++|+++|++|++++|++++......+ .....++..+.+|+.+ .+.+ .+.+.+
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 57899999999999999999999999999999987654322221 1111357778899974 2333 333443
Q ss_pred ccEEEEccccccc------c-Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCC--CCC--chHHHh
Q 047628 77 ANVVINLIGREYE------T-RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASS--SSP--SRVFST 138 (327)
Q Consensus 77 ~d~vi~~a~~~~~------~-~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~--~~~--~~y~~~ 138 (327)
+|++||+||.... . +. ...+++|+.++..+.+++. +.+ ..++|++||..... ..| ..|+.+
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~~~Y~aS 211 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYAVYAAT 211 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccchHHHHH
Confidence 5699999987421 1 11 2467889988888888764 344 46899999976532 223 789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
|.+.+.+.+.. ++++..+.||.+-.+-.. .. . . .......+++|+.++..+..
T Consensus 212 Kaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~--------~~-~--------~--~~~~~~p~~~A~~~~~~~~~ 271 (320)
T PLN02780 212 KAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMAS--------IR-R--------S--SFLVPSSDGYARAALRWVGY 271 (320)
T ss_pred HHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccc--------cc-C--------C--CCCCCCHHHHHHHHHHHhCC
Confidence 99998887653 488999999988532110 00 0 0 01135679999999998853
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.5e-14 Score=117.02 Aligned_cols=157 Identities=19% Similarity=0.270 Sum_probs=115.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh---hhcccCCCCCeeEEeeCCCChhHHHHHh-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMKFNPRDDNTIKATM------- 74 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~---~~~~~~~~~~v~~~~~Dl~~~~~~~~~~------- 74 (327)
+.++.|+|||||.-||.+++.+|.++|..++.+.|..++... .+.+.....++.++++|++|.+++.+++
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 446899999999999999999999999998888887766432 2222222225999999999999888665
Q ss_pred ccccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 75 AKANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 75 ~~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
.++|++||+||..... .-...+++|+-|+..+.+++ ++.+ -.|+|.+||.......| ..|..||.
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~~~~Y~ASK~ 168 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPFRSIYSASKH 168 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCcccccchHHH
Confidence 4689999999986421 11347789988777776665 4443 35999999987665555 58999999
Q ss_pred HHHHHHHhhC-----CCe-E--EEecCeee
Q 047628 141 AAEEAVLREL-----PWA-T--IMRPAAMI 162 (327)
Q Consensus 141 ~~E~~~~~~~-----~~~-~--i~r~~~~~ 162 (327)
+.+.+..... ... + .+-||.|=
T Consensus 169 Al~~f~etLR~El~~~~~~i~i~V~PG~V~ 198 (282)
T KOG1205|consen 169 ALEGFFETLRQELIPLGTIIIILVSPGPIE 198 (282)
T ss_pred HHHHHHHHHHHHhhccCceEEEEEecCcee
Confidence 9988876542 111 2 37777663
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.8e-13 Score=112.41 Aligned_cols=192 Identities=16% Similarity=0.142 Sum_probs=128.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh---ccccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM---AKANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~---~~~d~vi~ 82 (327)
|+++||||+|+||++++++|+++| ..|.+..|+.... . ..+++.++++|+++++++.++. .++|+|||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---~----~~~~~~~~~~Dls~~~~~~~~~~~~~~id~li~ 73 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---F----QHDNVQWHALDVTDEAEIKQLSEQFTQLDWLIN 73 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---c----ccCceEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 589999999999999999999985 5666666654331 1 1146888999999998876644 46899999
Q ss_pred cccccccc-----C-----c----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCC--CC-CCC--chHHHhH
Q 047628 83 LIGREYET-----R-----N----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGA--SS-SSP--SRVFSTK 139 (327)
Q Consensus 83 ~a~~~~~~-----~-----~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v--~~-~~~--~~y~~~K 139 (327)
++|..... . + ...+.+|+.++..+++.+.. .+ ..+++++||... .. ..+ ..|+.+|
T Consensus 74 ~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~~~~~Y~asK 152 (235)
T PRK09009 74 CVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLGGWYSYRASK 152 (235)
T ss_pred CCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCCCcchhhhhH
Confidence 99985321 0 0 13456777777766666543 33 357888887422 11 112 5799999
Q ss_pred HHHHHHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
..++.+.+.. ++.+..+.||.+-.+.... ... ..+ ...++..+|+|+++..++..
T Consensus 153 ~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~-------~~~--~~~-------~~~~~~~~~~a~~~~~l~~~ 216 (235)
T PRK09009 153 AALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP-------FQQ--NVP-------KGKLFTPEYVAQCLLGIIAN 216 (235)
T ss_pred HHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc-------hhh--ccc-------cCCCCCHHHHHHHHHHHHHc
Confidence 9999887653 3567788898876442111 000 011 12356789999999999987
Q ss_pred CCC-CCCceEEecC
Q 047628 211 DGT-SMGKIYELGG 223 (327)
Q Consensus 211 ~~~-~~~~~~~v~~ 223 (327)
... ..|..+.+.+
T Consensus 217 ~~~~~~g~~~~~~g 230 (235)
T PRK09009 217 ATPAQSGSFLAYDG 230 (235)
T ss_pred CChhhCCcEEeeCC
Confidence 642 1466666655
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.2e-13 Score=113.47 Aligned_cols=194 Identities=17% Similarity=0.180 Sum_probs=128.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
|.++||||++-||.+++++|. +|++|++++|+.++.......... ...+..+++|+.|++++.++++ .+|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 579999999999999999998 599999999987654322221111 1247789999999988876653 479
Q ss_pred EEEEccccccccC-----c---chhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYETR-----N---YSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
++||++|...... . .+...+|+.+...++.+ +.+.++-.++|++||.......+ ..|+.+|.+.+.
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~ 159 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDA 159 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHH
Confidence 9999999743211 1 12345666665554443 43332124899999975543333 679999999888
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
+.+.. ++.+..+.||.+..+. . ......+ -....+|+|++++.++.++.. +.
T Consensus 160 ~~~~la~el~~~~I~v~~v~PG~v~T~~-------~---~~~~~~~---------~~~~pe~~a~~~~~~~~~~~~--~~ 218 (246)
T PRK05599 160 FCQGLADSLHGSHVRLIIARPGFVIGSM-------T---TGMKPAP---------MSVYPRDVAAAVVSAITSSKR--ST 218 (246)
T ss_pred HHHHHHHHhcCCCceEEEecCCcccchh-------h---cCCCCCC---------CCCCHHHHHHHHHHHHhcCCC--Cc
Confidence 77653 3788889999875321 0 0000000 024679999999999997653 34
Q ss_pred eEEecC
Q 047628 218 IYELGG 223 (327)
Q Consensus 218 ~~~v~~ 223 (327)
.+.+.+
T Consensus 219 ~~~~~~ 224 (246)
T PRK05599 219 TLWIPG 224 (246)
T ss_pred eEEeCc
Confidence 555554
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.1e-12 Score=110.02 Aligned_cols=160 Identities=8% Similarity=0.007 Sum_probs=111.4
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHh-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATM-------A 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~-------~ 75 (327)
+++.++++||||++-||++++++|+++|++|.++.|+.++.....+... ...++..+.+|+.+++++.+++ .
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN 81 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3556899999999999999999999999999999998765433222111 0135777899999998887655 2
Q ss_pred -cccEEEEcccccccc-----Cc----chhHhhhhHHHHHHHH----HHHHcCCcceEEEEeccCCCCCCCchHHHhHHH
Q 047628 76 -KANVVINLIGREYET-----RN----YSFEDVNHFMAERIAG----IAKEHGGIMRFIQISCLGASSSSPSRVFSTKAA 141 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~-----~~----~~~~~~n~~~~~~l~~----a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~ 141 (327)
.+|++||++|..... .+ ...+.+|..++..+.+ .+++.++-.++|++||..... ....|+.+|.+
T Consensus 82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~-~~~~Y~asKaa 160 (227)
T PRK08862 82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDHQ-DLTGVESSNAL 160 (227)
T ss_pred CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCCC-CcchhHHHHHH
Confidence 579999999743211 11 1233456555555544 343332124899999865442 23679999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGT 164 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~ 164 (327)
.+.+.+.. ++++..+.||.+-.+
T Consensus 161 l~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 161 VSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 98887653 489999999987644
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.3e-12 Score=106.83 Aligned_cols=192 Identities=16% Similarity=0.103 Sum_probs=135.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
.+...||||||++-+|+.++.+++++|..+.+.+.+.....+..+...+..++....||+++.+++.+..+ ++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV 115 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence 34678999999999999999999999999999999887765544433221368899999999988876553 47
Q ss_pred cEEEEccccccccC----c----chhHhhhhHHHHHHHH----HHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR----N----YSFEDVNHFMAERIAG----IAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~----a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||.....+ + ...+++|+.+.....+ .+.+.+ -.|+|-++|....-..+ ..|..||.++.
T Consensus 116 ~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~gl~~YcaSK~a~v 194 (300)
T KOG1201|consen 116 DILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAGLADYCASKFAAV 194 (300)
T ss_pred eEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCccchhhhhhHHHHH
Confidence 99999999864321 1 3577888876555444 455544 45999999975543333 78999999885
Q ss_pred HHHHhh----------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE----------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~----------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
-+.++. +++++.+.|+.+= ..++ . + ..+ -....+.+..+.+|+.++.++..+..
T Consensus 195 GfhesL~~EL~~~~~~~IktTlv~P~~i~---Tgmf-------~-~-~~~----~~~l~P~L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 195 GFHESLSMELRALGKDGIKTTLVCPYFIN---TGMF-------D-G-ATP----FPTLAPLLEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred HHHHHHHHHHHhcCCCCeeEEEEeeeecc---cccc-------C-C-CCC----CccccCCCCHHHHHHHHHHHHHcCCc
Confidence 443322 2778888887653 1111 1 1 111 12346778899999999999997764
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.49 E-value=8.2e-13 Score=116.28 Aligned_cols=197 Identities=12% Similarity=0.094 Sum_probs=127.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
|+++++||||++.||.+++++|+++| ++|+++.|+.++......... ...++..+.+|+++.+++.++++ +
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 35789999999999999999999999 999999998654332222221 11357788999999988876653 4
Q ss_pred ccEEEEcccccccc------Cc---chhHhhhhHHHHHHHHHHH----HcC-CcceEEEEeccCCCCC------------
Q 047628 77 ANVVINLIGREYET------RN---YSFEDVNHFMAERIAGIAK----EHG-GIMRFIQISCLGASSS------------ 130 (327)
Q Consensus 77 ~d~vi~~a~~~~~~------~~---~~~~~~n~~~~~~l~~a~~----~~~-~v~~~v~~Ss~~v~~~------------ 130 (327)
+|++||+||..... +. ...+++|+.++..+++++. +.+ .-.++|++||...+..
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~ 161 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANL 161 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccc
Confidence 79999999964211 11 2356889888777766543 332 0258999999754210
Q ss_pred -------------------C----CchHHHhHHHHHHHHHhh--------CCCeEEEecCeeecCC--ChhH---HHHHH
Q 047628 131 -------------------S----PSRVFSTKAAAEEAVLRE--------LPWATIMRPAAMIGTE--DRLL---NKWAQ 174 (327)
Q Consensus 131 -------------------~----~~~y~~~K~~~E~~~~~~--------~~~~~i~r~~~~~G~~--~~~~---~~~~~ 174 (327)
. ...|+.+|.+...+.+.. ++.++.++||.+.... .... ..+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~~ 241 (314)
T TIGR01289 162 GDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLFP 241 (314)
T ss_pred cccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHHH
Confidence 0 146999999965544322 4788999999885321 1111 11111
Q ss_pred HHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.... ... ..+.+.++.|+.++.++....
T Consensus 242 ~~~~---~~~-------~~~~~~~~~a~~l~~~~~~~~ 269 (314)
T TIGR01289 242 PFQK---YIT-------KGYVSEEEAGERLAQVVSDPK 269 (314)
T ss_pred HHHH---HHh-------ccccchhhhhhhhHHhhcCcc
Confidence 1100 000 124678899999988887643
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.48 E-value=4e-13 Score=107.16 Aligned_cols=139 Identities=23% Similarity=0.244 Sum_probs=107.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCC--CCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRG--CEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~--~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++++||||+|-||..++++|+++| +.|+++.|+ .+..... +...+ .++.++++|+++++++.++++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPG--AKITFIECDLSDPESIRALIEEVIKRF 78 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTT--SEEEEEESETTSHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 579999999999999999999995 688888888 2222211 22222 578999999999988887764
Q ss_pred -cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 76 -KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
.+|++||++|...... -...+++|+.+...+.+++...+ -.++|++||.......| ..|..+|.+++.
T Consensus 79 ~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~askaal~~ 157 (167)
T PF00106_consen 79 GPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGSPGMSAYSASKAALRG 157 (167)
T ss_dssp SSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSSTTBHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccCCCCChhHHHHHHHHHH
Confidence 3699999999855221 13577889999999999888755 57999999987765555 789999999998
Q ss_pred HHHhh
Q 047628 145 AVLRE 149 (327)
Q Consensus 145 ~~~~~ 149 (327)
+.+..
T Consensus 158 ~~~~l 162 (167)
T PF00106_consen 158 LTQSL 162 (167)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=1.7e-11 Score=95.48 Aligned_cols=209 Identities=18% Similarity=0.162 Sum_probs=140.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
+++..+||||+.-||++++..|...|++|.+.+++..........++...+...+.||+.+++++...++ .++
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 4578999999999999999999999999999999887655544444433456778999999887766554 369
Q ss_pred EEEEcccccccc-------Cc-chhHhhhhHHHHHHHHHHHHc----C-CcceEEEEeccCC-CCC-CCchHHHhHH---
Q 047628 79 VVINLIGREYET-------RN-YSFEDVNHFMAERIAGIAKEH----G-GIMRFIQISCLGA-SSS-SPSRVFSTKA--- 140 (327)
Q Consensus 79 ~vi~~a~~~~~~-------~~-~~~~~~n~~~~~~l~~a~~~~----~-~v~~~v~~Ss~~v-~~~-~~~~y~~~K~--- 140 (327)
++++|||++.+. +. .....+|+.++..+.+++.+. + .--++|.+||+-- -++ ....|..+|.
T Consensus 93 vlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvI 172 (256)
T KOG1200|consen 93 VLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVI 172 (256)
T ss_pred EEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCcee
Confidence 999999997542 22 246688988888777776543 1 0128999999632 222 2356666554
Q ss_pred -----HHHHHHHhhCCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 141 -----AAEEAVLRELPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 141 -----~~E~~~~~~~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
++.+ +.+.++++.++.||.+--|-.. .-+.....+...-+.. .+-..+|+|..++.+......+
T Consensus 173 gftktaArE-la~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmg---------r~G~~EevA~~V~fLAS~~ssY 242 (256)
T KOG1200|consen 173 GFTKTAARE-LARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMG---------RLGEAEEVANLVLFLASDASSY 242 (256)
T ss_pred eeeHHHHHH-HhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCcc---------ccCCHHHHHHHHHHHhcccccc
Confidence 4333 3344699999999988654221 1122333333222222 2334589999999888654432
Q ss_pred -CCceEEecCC
Q 047628 215 -MGKIYELGGP 224 (327)
Q Consensus 215 -~~~~~~v~~~ 224 (327)
.|..+.++++
T Consensus 243 iTG~t~evtGG 253 (256)
T KOG1200|consen 243 ITGTTLEVTGG 253 (256)
T ss_pred ccceeEEEecc
Confidence 5778888775
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.5e-11 Score=104.60 Aligned_cols=213 Identities=12% Similarity=0.065 Sum_probs=131.6
Q ss_pred CcccCCcEEEEEcC--CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc-----------cCC---CCCeeEEeeCC-
Q 047628 2 TYVYSGIIATVFGT--TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL-----------MGD---LGQIVPMKFNP- 64 (327)
Q Consensus 2 ~~~~~~~~ilI~Ga--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-----------~~~---~~~v~~~~~Dl- 64 (327)
++.++.+.+||||| +.-||.++++.|.+.|.+|++ .|..+........ ... ......+.+|+
T Consensus 4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~ 82 (303)
T PLN02730 4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV 82 (303)
T ss_pred CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence 45677899999999 899999999999999999988 5553332111100 000 01135678888
Q ss_pred -CChh------------------HHHHHhc-------cccEEEEccccccc-------cCc---chhHhhhhHHHHHHHH
Q 047628 65 -RDDN------------------TIKATMA-------KANVVINLIGREYE-------TRN---YSFEDVNHFMAERIAG 108 (327)
Q Consensus 65 -~~~~------------------~~~~~~~-------~~d~vi~~a~~~~~-------~~~---~~~~~~n~~~~~~l~~ 108 (327)
.+++ ++.++++ .+|++||+||.... .+. ...+++|+.+...+.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~ 162 (303)
T PLN02730 83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ 162 (303)
T ss_pred cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence 3222 4554443 37999999964211 111 3467889988888877
Q ss_pred HHHHcC-CcceEEEEeccCCCCCCC---chHHHhHHHHHHHHHhh--------CCCeEEEecCeeecCCChhH---HHHH
Q 047628 109 IAKEHG-GIMRFIQISCLGASSSSP---SRVFSTKAAAEEAVLRE--------LPWATIMRPAAMIGTEDRLL---NKWA 173 (327)
Q Consensus 109 a~~~~~-~v~~~v~~Ss~~v~~~~~---~~y~~~K~~~E~~~~~~--------~~~~~i~r~~~~~G~~~~~~---~~~~ 173 (327)
++...= .-.++|++||.......| ..|+.+|.+.+.+.+.+ ++++..+.||.+--+....+ ....
T Consensus 163 ~~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~ 242 (303)
T PLN02730 163 HFGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMI 242 (303)
T ss_pred HHHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHH
Confidence 765430 013899999976543333 36999999998887643 36778888887753311100 1111
Q ss_pred HHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEecCC
Q 047628 174 QFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
.... ...+. ..+...+|++.+++.++..... ..|+.+.+.++
T Consensus 243 ~~~~--~~~pl-------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 243 EYSY--ANAPL-------QKELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred HHHH--hcCCC-------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 1111 11111 1245779999999999875432 26778887765
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.7e-12 Score=110.06 Aligned_cols=202 Identities=20% Similarity=0.200 Sum_probs=136.1
Q ss_pred cCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh--------ccccEEEEc
Q 047628 14 GTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM--------AKANVVINL 83 (327)
Q Consensus 14 Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--------~~~d~vi~~ 83 (327)
|++ +-||+++++.|+++|++|++.+|+.++....+....+....+++.+|+++++++.+++ ..+|++||+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~ 80 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN 80 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence 566 9999999999999999999999998763222221111112446999999998887664 347999999
Q ss_pred cccccc---cCc---------chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHh
Q 047628 84 IGREYE---TRN---------YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 84 a~~~~~---~~~---------~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~ 148 (327)
++.... ..+ ...+++|+.+...+++++...- +-.++|++||.......+ ..|+.+|.+.+.+.+.
T Consensus 81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~ 160 (241)
T PF13561_consen 81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRS 160 (241)
T ss_dssp EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHH
Confidence 987543 111 2356777777777777664320 014799999976543333 6899999999988864
Q ss_pred --------hCCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCC
Q 047628 149 --------ELPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMG 216 (327)
Q Consensus 149 --------~~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~ 216 (327)
.++++..+.||.+..+....+ ..+.....+. .|+ ..+...+|+|.+++.++..... ..|
T Consensus 161 lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~--~pl-------~r~~~~~evA~~v~fL~s~~a~~itG 231 (241)
T PF13561_consen 161 LAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKR--IPL-------GRLGTPEEVANAVLFLASDAASYITG 231 (241)
T ss_dssp HHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHH--STT-------SSHBEHHHHHHHHHHHHSGGGTTGTS
T ss_pred HHHHhccccCeeeeeecccceeccchhccccccchhhhhhhh--hcc-------CCCcCHHHHHHHHHHHhCccccCccC
Confidence 358899999998873321111 2222222211 221 1245789999999999987632 278
Q ss_pred ceEEecCC
Q 047628 217 KIYELGGP 224 (327)
Q Consensus 217 ~~~~v~~~ 224 (327)
++..+.++
T Consensus 232 ~~i~vDGG 239 (241)
T PF13561_consen 232 QVIPVDGG 239 (241)
T ss_dssp EEEEESTT
T ss_pred CeEEECCC
Confidence 88888876
|
... |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.6e-12 Score=109.18 Aligned_cols=202 Identities=15% Similarity=0.067 Sum_probs=125.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc---------hhhh-cccC-CCCCeeEEeeCCCChhHHHH
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD---------PRHL-KLMG-DLGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~---------~~~~-~~~~-~~~~v~~~~~Dl~~~~~~~~ 72 (327)
.+..+.++||||++.||.+++++|++.|++|+++.|+.+.. ...+ .... ...++.++++|+++++++.+
T Consensus 5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~ 84 (305)
T PRK08303 5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA 84 (305)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 35568999999999999999999999999999999975321 1111 1111 01247788999999988877
Q ss_pred Hhc-------cccEEEEcc-cccc-----c----cCc---chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCC
Q 047628 73 TMA-------KANVVINLI-GREY-----E----TRN---YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGAS 128 (327)
Q Consensus 73 ~~~-------~~d~vi~~a-~~~~-----~----~~~---~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~ 128 (327)
+++ .+|++||++ |... . ... ...+++|+.+...+++++.. .+ -.++|++||....
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~ 163 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAE 163 (305)
T ss_pred HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCcccc
Confidence 664 479999999 6321 0 011 12456777777766665543 32 2489999985432
Q ss_pred -C--CC--CchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCce-eeecCCCceecce
Q 047628 129 -S--SS--PSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF-PLFGDGSTRIQPV 195 (327)
Q Consensus 129 -~--~~--~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i 195 (327)
. .. ...|+.+|.++..+.+.. ++++..+.||.+-.+ ....... .. .... ..........-+.
T Consensus 164 ~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~---~~~~~~~-~~-~~~~~~~~~~~p~~~~~~ 238 (305)
T PRK08303 164 YNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE---MMLDAFG-VT-EENWRDALAKEPHFAISE 238 (305)
T ss_pred ccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH---HHHHhhc-cC-ccchhhhhccccccccCC
Confidence 1 11 256999999998887643 488899999977422 1111000 00 0000 0000000001234
Q ss_pred eHHHHHHHHHHHhhcC
Q 047628 196 YVVDVAAAVTAALKDD 211 (327)
Q Consensus 196 ~~~D~a~~~~~~l~~~ 211 (327)
..+|+|.+++.++..+
T Consensus 239 ~peevA~~v~fL~s~~ 254 (305)
T PRK08303 239 TPRYVGRAVAALAADP 254 (305)
T ss_pred CHHHHHHHHHHHHcCc
Confidence 6799999999998765
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.39 E-value=3.9e-11 Score=102.53 Aligned_cols=216 Identities=16% Similarity=0.103 Sum_probs=145.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc----CCCCCeeEEeeCCCChhHHHHHh-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM----GDLGQIVPMKFNPRDDNTIKATM----- 74 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~~~~~~----- 74 (327)
....+.++|||++.-||++++.+|.+.|.+|+...|+.+........+ ...+++..+.+|+++++...+++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999987643332221 11246889999999876655443
Q ss_pred ---ccccEEEEccccccccC------c---chhHhhhhH-HHHHHHHHHHHc----CCcceEEEEeccCCCCCC--C-ch
Q 047628 75 ---AKANVVINLIGREYETR------N---YSFEDVNHF-MAERIAGIAKEH----GGIMRFIQISCLGASSSS--P-SR 134 (327)
Q Consensus 75 ---~~~d~vi~~a~~~~~~~------~---~~~~~~n~~-~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~--~-~~ 134 (327)
.+.|++|++||...... . +..+.+|+. ....+..++... + -..++++||....... + ..
T Consensus 85 ~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~~~~~~~ 163 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPGPGSGVA 163 (270)
T ss_pred HhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCCCCCccc
Confidence 24799999999854321 1 346788888 466666665432 2 3478888887654332 2 68
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh------hHHHHHHHHhhcCceeeecCCCceecceeHHHHH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 201 (327)
|+.+|.+.+++.+.. ++++..+-||.+..+... ....+..........| .-.+...+|++
T Consensus 164 Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p-------~gr~g~~~eva 236 (270)
T KOG0725|consen 164 YGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP-------LGRVGTPEEVA 236 (270)
T ss_pred chhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-------cCCccCHHHHH
Confidence 999999999998865 488999999988765310 0111111100011111 12445679999
Q ss_pred HHHHHHhhcCCC-CCCceEEecCCccc
Q 047628 202 AAVTAALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 202 ~~~~~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
..+..++..... ..|+...+.++..+
T Consensus 237 ~~~~fla~~~asyitG~~i~vdgG~~~ 263 (270)
T KOG0725|consen 237 EAAAFLASDDASYITGQTIIVDGGFTV 263 (270)
T ss_pred HhHHhhcCcccccccCCEEEEeCCEEe
Confidence 999888776432 26778888776543
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.39 E-value=6.4e-12 Score=110.39 Aligned_cols=204 Identities=13% Similarity=0.110 Sum_probs=127.0
Q ss_pred EEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cccEEE
Q 047628 11 TVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KANVVI 81 (327)
Q Consensus 11 lI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~vi 81 (327)
+||||++.||.+++++|+++| ++|++..|+.+.......... ...++.++.+|+.+.+++.++++ .+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 699999999999999999999 999999998654332222221 11357888999999998876653 379999
Q ss_pred Ecccccccc------Cc---chhHhhhhHHHHHHHHHHH----HcCC-cceEEEEeccCCCCC-----------------
Q 047628 82 NLIGREYET------RN---YSFEDVNHFMAERIAGIAK----EHGG-IMRFIQISCLGASSS----------------- 130 (327)
Q Consensus 82 ~~a~~~~~~------~~---~~~~~~n~~~~~~l~~a~~----~~~~-v~~~v~~Ss~~v~~~----------------- 130 (327)
|+||..... +. ...+++|+.++..+++++. +.+. ..++|++||......
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~ 160 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG 160 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence 999874221 11 2467889988777766543 3320 258999999644210
Q ss_pred --------------------CCchHHHhHHHHHHHHH----h----hCCCeEEEecCeeecCC--ChhHHHHHHHHhhcC
Q 047628 131 --------------------SPSRVFSTKAAAEEAVL----R----ELPWATIMRPAAMIGTE--DRLLNKWAQFVKKFN 180 (327)
Q Consensus 131 --------------------~~~~y~~~K~~~E~~~~----~----~~~~~~i~r~~~~~G~~--~~~~~~~~~~~~~~~ 180 (327)
....|+.+|.+.+.+.+ + .++.++.+.||.+.... ...............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~ 240 (308)
T PLN00015 161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQ 240 (308)
T ss_pred hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHH
Confidence 01459999998555433 2 24889999999885321 111111100000000
Q ss_pred ceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEe
Q 047628 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYEL 221 (327)
Q Consensus 181 ~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v 221 (327)
..+. ..+...++.|+.++.++..... ..|..|..
T Consensus 241 ~~~~-------~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~ 275 (308)
T PLN00015 241 KYIT-------KGYVSEEEAGKRLAQVVSDPSLTKSGVYWSW 275 (308)
T ss_pred HHHh-------cccccHHHhhhhhhhhccccccCCCcccccc
Confidence 0110 1246779999999987775432 13444443
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-11 Score=102.75 Aligned_cols=154 Identities=16% Similarity=0.110 Sum_probs=116.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--------- 75 (327)
.+.+-|+|||...-.|..++++|.++|+.|.+-.-.++.. +.+....+.++...++.|+++++++.++.+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~ga-e~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~ 105 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGA-ESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED 105 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchH-HHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence 3457799999999999999999999999999988655553 333333224688999999999999988764
Q ss_pred cccEEEEccccccccCc---------chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 KANVVINLIGREYETRN---------YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~~---------~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+.-.|||+||+.....+ ....++|+-|+.++..+. +++. .|+|++||....-..| .+|..||.
T Consensus 106 gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~~p~~g~Y~~SK~ 183 (322)
T KOG1610|consen 106 GLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVALPALGPYCVSKF 183 (322)
T ss_pred cceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCccCcccccchhhHH
Confidence 24699999996432111 356788887776666654 5553 4999999987654454 89999999
Q ss_pred HHHHHHH-------hhCCCeEEEecCee
Q 047628 141 AAEEAVL-------RELPWATIMRPAAM 161 (327)
Q Consensus 141 ~~E~~~~-------~~~~~~~i~r~~~~ 161 (327)
++|.+.. .+|+.+.++-||.+
T Consensus 184 aVeaf~D~lR~EL~~fGV~VsiiePG~f 211 (322)
T KOG1610|consen 184 AVEAFSDSLRRELRPFGVKVSIIEPGFF 211 (322)
T ss_pred HHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence 9998753 35799999999944
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.9e-11 Score=97.69 Aligned_cols=213 Identities=16% Similarity=0.124 Sum_probs=145.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh--hhcccCCCCCeeEEeeCCCChhHHHHHhcc-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR--HLKLMGDLGQIVPMKFNPRDDNTIKATMAK----- 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----- 76 (327)
....+++++||+.|-||..+.++|+++|..+.++.-+.+.... .++.......+.++++|+++..++.++++.
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 3457899999999999999999999999988888777766432 233333335688999999998888887764
Q ss_pred --ccEEEEccccccccCcchhHhhhhH----HHHHHHHHHHHc--CCcceEEEEeccCCCCCCC--chHHHhHHHH----
Q 047628 77 --ANVVINLIGREYETRNYSFEDVNHF----MAERIAGIAKEH--GGIMRFIQISCLGASSSSP--SRVFSTKAAA---- 142 (327)
Q Consensus 77 --~d~vi~~a~~~~~~~~~~~~~~n~~----~~~~l~~a~~~~--~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~---- 142 (327)
+|++||.||...+.+-+....+|+. +|...+++..+. |+-.-+|..||..-..+.| ..|+.+|..+
T Consensus 82 g~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFT 161 (261)
T KOG4169|consen 82 GTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFT 161 (261)
T ss_pred CceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeee
Confidence 6999999999877665667777764 566667776543 2223578899865554454 6788887744
Q ss_pred -----HHHHHhhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecC----CCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 -----EEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD----GSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 -----E~~~~~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.++.|+.+..++||.+-- ..... +...+.+.-.++ .-.+..--+..+++..++.++|.+.
T Consensus 162 RSla~~ayy~~sGV~~~avCPG~t~t---~l~~~----~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a~~~v~aiE~~~- 233 (261)
T KOG4169|consen 162 RSLADLAYYQRSGVRFNAVCPGFTRT---DLAEN----IDASGGYLEYSDSIKEALERAPKQSPACCAINIVNAIEYPK- 233 (261)
T ss_pred hhhhhhhhHhhcCEEEEEECCCcchH---HHHHH----HHhcCCcccccHHHHHHHHHcccCCHHHHHHHHHHHHhhcc-
Confidence 555666789999999987641 11111 111111111000 0001122355889999999999966
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
+|.+|.+..+.
T Consensus 234 -NGaiw~v~~g~ 244 (261)
T KOG4169|consen 234 -NGAIWKVDSGS 244 (261)
T ss_pred -CCcEEEEecCc
Confidence 58899998764
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.5e-11 Score=104.23 Aligned_cols=186 Identities=13% Similarity=0.019 Sum_probs=126.9
Q ss_pred HHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc----cccEEEEccccccccCcchhHhh
Q 047628 23 VVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----KANVVINLIGREYETRNYSFEDV 98 (327)
Q Consensus 23 l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~ 98 (327)
++++|+++|++|++++|+.++.. ..+++++|+++.+++.++++ ++|+|||+||..........+++
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~v 70 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARV 70 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhh
Confidence 46889999999999999865521 13567999999999988876 47999999997644444567899
Q ss_pred hhHHHHHHHHHHHHcC-CcceEEEEeccCCCC---------------------------CCC--chHHHhHHHHHHHHHh
Q 047628 99 NHFMAERIAGIAKEHG-GIMRFIQISCLGASS---------------------------SSP--SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 99 n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~---------------------------~~~--~~y~~~K~~~E~~~~~ 148 (327)
|+.++..+++++...- +-.++|++||...+. ..+ ..|+.+|.+.+.+.+.
T Consensus 71 N~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~ 150 (241)
T PRK12428 71 NFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMR 150 (241)
T ss_pred chHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHHHHHH
Confidence 9999999999887541 025899999976642 112 6899999999866532
Q ss_pred --------hCCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCce
Q 047628 149 --------ELPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKI 218 (327)
Q Consensus 149 --------~~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~ 218 (327)
.++++.+++||.+.++-.. ...............+ ...+...+|+|++++.++..... ..|+.
T Consensus 151 la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-------~~~~~~pe~va~~~~~l~s~~~~~~~G~~ 223 (241)
T PRK12428 151 QAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKR-------MGRPATADEQAAVLVFLCSDAARWINGVN 223 (241)
T ss_pred HHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccc-------cCCCCCHHHHHHHHHHHcChhhcCccCcE
Confidence 2489999999999765321 1110000000000001 11246789999999998865332 25777
Q ss_pred EEecCCc
Q 047628 219 YELGGPD 225 (327)
Q Consensus 219 ~~v~~~~ 225 (327)
..+.++.
T Consensus 224 i~vdgg~ 230 (241)
T PRK12428 224 LPVDGGL 230 (241)
T ss_pred EEecCch
Confidence 7777653
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.36 E-value=8.7e-11 Score=94.00 Aligned_cols=196 Identities=17% Similarity=0.169 Sum_probs=128.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEe-eCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVP-FRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
|+++.|+||||+.-||..|+++|++. |.++... .|+++.+...+..+. ..+++++++.|+++.+++.++.+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iV 80 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIV 80 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhc
Confidence 34567999999999999999999975 6665554 555666544444443 34789999999999888876653
Q ss_pred ---cccEEEEccccccc----cCc-----chhHhhhhHHHHHHHHHH----HHcC--------Cc--ceEEEEeccCCCC
Q 047628 76 ---KANVVINLIGREYE----TRN-----YSFEDVNHFMAERIAGIA----KEHG--------GI--MRFIQISCLGASS 129 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~----~~~-----~~~~~~n~~~~~~l~~a~----~~~~--------~v--~~~v~~Ss~~v~~ 129 (327)
+.|.+|++||.... ..+ ...+++|..++..+.+++ +++. .+ ..+|++||....-
T Consensus 81 g~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~ 160 (249)
T KOG1611|consen 81 GSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSI 160 (249)
T ss_pred ccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeecccccc
Confidence 46999999998432 111 346677876655554432 2221 01 2688888854421
Q ss_pred -----CCCchHHHhHHHHHHHHHhhC-------CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeH
Q 047628 130 -----SSPSRVFSTKAAAEEAVLREL-------PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 130 -----~~~~~y~~~K~~~E~~~~~~~-------~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 197 (327)
..-..|..+|.++-...++.. +-++.+.||+|--.- |. .-..+.+
T Consensus 161 ~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDM--------------------gg---~~a~ltv 217 (249)
T KOG1611|consen 161 GGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDM--------------------GG---KKAALTV 217 (249)
T ss_pred CCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCC--------------------CC---CCcccch
Confidence 112789999999988887754 557888899885110 11 2344666
Q ss_pred HHHHHHHHHHhhc-CCCCCCceEEecC
Q 047628 198 VDVAAAVTAALKD-DGTSMGKIYELGG 223 (327)
Q Consensus 198 ~D~a~~~~~~l~~-~~~~~~~~~~v~~ 223 (327)
++-+.-++..+.+ ...+.|..||-.+
T Consensus 218 eeSts~l~~~i~kL~~~hnG~ffn~dl 244 (249)
T KOG1611|consen 218 EESTSKLLASINKLKNEHNGGFFNRDG 244 (249)
T ss_pred hhhHHHHHHHHHhcCcccCcceEccCC
Confidence 7777777766654 2223677777654
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.9e-11 Score=95.82 Aligned_cols=152 Identities=14% Similarity=0.090 Sum_probs=102.9
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCC-C-c-hhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCE-D-D-PRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~-~-~-~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
.++||||+|-||..+++.|.+++ .+|+++.|+.. . . ...+..+. ...++.++++|++|++++.+++..
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 58999999999999999999997 58999999932 2 1 11222111 125789999999999999988854
Q ss_pred ccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC-C-CCCCchHHHhHHHHHHHH
Q 047628 77 ANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA-S-SSSPSRVFSTKAAAEEAV 146 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v-~-~~~~~~y~~~K~~~E~~~ 146 (327)
++.|||+++...+. ++ ...+..-+.++.+|.++..... ++.||.+||+.. . ......|..+-...+.+.
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a 160 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGGPGQSAYAAANAFLDALA 160 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccCcchHhHHHHHHHHHHHH
Confidence 48999999985431 11 2345556788999999998877 899999999754 2 233478888888777776
Q ss_pred Hh---hCCCeEEEecCee
Q 047628 147 LR---ELPWATIMRPAAM 161 (327)
Q Consensus 147 ~~---~~~~~~i~r~~~~ 161 (327)
+. .+.+++.+.-+.+
T Consensus 161 ~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 161 RQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHTTSEEEEEEE-EB
T ss_pred HHHHhCCCCEEEEEcccc
Confidence 44 3577777776543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.29 E-value=3.1e-11 Score=95.41 Aligned_cols=149 Identities=15% Similarity=0.096 Sum_probs=110.4
Q ss_pred CcEEEEEcC-CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--------c
Q 047628 7 GIIATVFGT-TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--------A 77 (327)
Q Consensus 7 ~~~ilI~Ga-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--------~ 77 (327)
.++|||||+ +|-||.+|++.+.+.|+.|++..|+.+.-...-.. .++.....|+++++++.+.... .
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~----~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkl 82 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ----FGLKPYKLDVSKPEEVVTVSGEVRANPDGKL 82 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh----hCCeeEEeccCChHHHHHHHHHHhhCCCCce
Confidence 478998875 69999999999999999999999998774332212 2588899999999988776532 5
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|.++++||..-.. .-+.++.+|+-|..++.++.. ++. ..+|++.|+.++-..| +.|..+|++..
T Consensus 83 d~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaK--GtIVnvgSl~~~vpfpf~~iYsAsKAAih 160 (289)
T KOG1209|consen 83 DLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAK--GTIVNVGSLAGVVPFPFGSIYSASKAAIH 160 (289)
T ss_pred EEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHcc--ceEEEecceeEEeccchhhhhhHHHHHHH
Confidence 9999999985321 124678888876666655543 332 3899999988776666 78999999999
Q ss_pred HHHHhhC-------CCeEEEecCee
Q 047628 144 EAVLREL-------PWATIMRPAAM 161 (327)
Q Consensus 144 ~~~~~~~-------~~~~i~r~~~~ 161 (327)
.+.+... ++++.+-+|.+
T Consensus 161 ay~~tLrlEl~PFgv~Vin~itGGv 185 (289)
T KOG1209|consen 161 AYARTLRLELKPFGVRVINAITGGV 185 (289)
T ss_pred HhhhhcEEeeeccccEEEEecccce
Confidence 8877653 55555555544
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=1e-10 Score=101.47 Aligned_cols=159 Identities=16% Similarity=0.080 Sum_probs=114.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc---CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM---GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+..+.++|||||.-||..+++.|..+|.+|+...|+.+......+.. ....++.++++|+.+.+++.+..+
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~ 112 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE 112 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence 34578999999999999999999999999999999986544333322 223467789999999998887654
Q ss_pred -cccEEEEccccccccC------cchhHhhhhHHHHHH----HHHHHHcCCcceEEEEeccCCCC----------CC--C
Q 047628 76 -KANVVINLIGREYETR------NYSFEDVNHFMAERI----AGIAKEHGGIMRFIQISCLGASS----------SS--P 132 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~------~~~~~~~n~~~~~~l----~~a~~~~~~v~~~v~~Ss~~v~~----------~~--~ 132 (327)
..|++|++||+..... -+..+.+|..|...| ++.++... ..|+|++||..... .. .
T Consensus 113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l~~~~~~~~ 191 (314)
T KOG1208|consen 113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDLSGEKAKLY 191 (314)
T ss_pred CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhccchhccCc
Confidence 2599999999864322 245667787665554 45556665 36999999955310 00 0
Q ss_pred ---chHHHhHHHHHHHHHhh------CCCeEEEecCeeecC
Q 047628 133 ---SRVFSTKAAAEEAVLRE------LPWATIMRPAAMIGT 164 (327)
Q Consensus 133 ---~~y~~~K~~~E~~~~~~------~~~~~i~r~~~~~G~ 164 (327)
..|+.||.+......+. ++.+..+.||.+..+
T Consensus 192 ~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 192 SSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred cchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCccccc
Confidence 23999999875555443 488999999988765
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.9e-11 Score=93.05 Aligned_cols=154 Identities=17% Similarity=0.107 Sum_probs=110.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+...+||||||+.-||..++++|++.|-+|+...|+.++....... .+.+....||+.|.++..+.++ ..
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~---~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE---NPEIHTEVCDVADRDSRRELVEWLKKEYPNL 79 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc---CcchheeeecccchhhHHHHHHHHHhhCCch
Confidence 3456899999999999999999999999999999998775444333 2578888999999886665543 35
Q ss_pred cEEEEccccccccC----------cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCC-CCC-CchHHHhHHH
Q 047628 78 NVVINLIGREYETR----------NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGAS-SSS-PSRVFSTKAA 141 (327)
Q Consensus 78 d~vi~~a~~~~~~~----------~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~-~~~-~~~y~~~K~~ 141 (327)
+++|+|||+....+ ..+-.++|+.++.+|..+...+ . -..+|-+||.-.. +.. -..|..+|.+
T Consensus 80 NvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvPm~~~PvYcaTKAa 158 (245)
T COG3967 80 NVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVPMASTPVYCATKAA 158 (245)
T ss_pred heeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCcccccccchhhHHH
Confidence 99999999854311 1345677888888887766443 2 3468888884322 221 1468899998
Q ss_pred HHHHHHh-------hCCCeEEEecCeee
Q 047628 142 AEEAVLR-------ELPWATIMRPAAMI 162 (327)
Q Consensus 142 ~E~~~~~-------~~~~~~i~r~~~~~ 162 (327)
+..+-.. .+++++-+-|+.|-
T Consensus 159 iHsyt~aLR~Qlk~t~veVIE~~PP~V~ 186 (245)
T COG3967 159 IHSYTLALREQLKDTSVEVIELAPPLVD 186 (245)
T ss_pred HHHHHHHHHHHhhhcceEEEEecCCcee
Confidence 8776533 24777777788775
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.3e-11 Score=94.30 Aligned_cols=214 Identities=18% Similarity=0.131 Sum_probs=144.0
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---cc
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---AN 78 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d 78 (327)
..+...+.|++||+.--||+.++..|.+.|.+|+++.|++.......++-. ..++.+.+|+.+.+.+.+.+.. +|
T Consensus 2 ~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p--~~I~Pi~~Dls~wea~~~~l~~v~pid 79 (245)
T KOG1207|consen 2 KTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP--SLIIPIVGDLSAWEALFKLLVPVFPID 79 (245)
T ss_pred cccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC--cceeeeEecccHHHHHHHhhcccCchh
Confidence 344556899999999999999999999999999999999877544443321 2388999999999988888865 59
Q ss_pred EEEEccccccc--------cCcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC--CCchHHHhHHHHHH
Q 047628 79 VVINLIGREYE--------TRNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS--SPSRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E~ 144 (327)
.++++||..-. ++-...+++|+.+..++.+... ..+.-..+|.+||...... ..+.|..+|.+.+.
T Consensus 80 gLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDm 159 (245)
T KOG1207|consen 80 GLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDM 159 (245)
T ss_pred hhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHH
Confidence 99999987321 2224566788887777766532 2331125899999766432 33789999999888
Q ss_pred HHHhh----C---CCeEEEecCeeecC-CChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CC
Q 047628 145 AVLRE----L---PWATIMRPAAMIGT-EDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SM 215 (327)
Q Consensus 145 ~~~~~----~---~~~~i~r~~~~~G~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~ 215 (327)
.-+.. | +++..+-|..++-. +... |....+.++.+.. -..-.|..++.++.++..++.+... ..
T Consensus 160 lTk~lAlELGp~kIRVNsVNPTVVmT~MG~dn---WSDP~K~k~mL~r----iPl~rFaEV~eVVnA~lfLLSd~ssmtt 232 (245)
T KOG1207|consen 160 LTKCLALELGPQKIRVNSVNPTVVMTDMGRDN---WSDPDKKKKMLDR----IPLKRFAEVDEVVNAVLFLLSDNSSMTT 232 (245)
T ss_pred HHHHHHHhhCcceeEeeccCCeEEEecccccc---cCCchhccchhhh----CchhhhhHHHHHHhhheeeeecCcCccc
Confidence 76543 3 67777788877643 1111 1111221211110 1113567889999999988876543 25
Q ss_pred CceEEecCC
Q 047628 216 GKIYELGGP 224 (327)
Q Consensus 216 ~~~~~v~~~ 224 (327)
|....+.++
T Consensus 233 GstlpveGG 241 (245)
T KOG1207|consen 233 GSTLPVEGG 241 (245)
T ss_pred CceeeecCC
Confidence 666666654
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.7e-09 Score=94.03 Aligned_cols=214 Identities=14% Similarity=0.112 Sum_probs=125.2
Q ss_pred CcccCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCC---------CCchh--hh-cccC-------------CC
Q 047628 2 TYVYSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGC---------EDDPR--HL-KLMG-------------DL 54 (327)
Q Consensus 2 ~~~~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~---------~~~~~--~~-~~~~-------------~~ 54 (327)
...+..+.++|||++ .-||+++++.|.++|++|++..|.+ +.... .. ...+ +.
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~ 82 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF 82 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence 344567899999995 8999999999999999999876531 11000 00 0000 00
Q ss_pred CCeeEEeeCCCC--------hhHHHHHh-------ccccEEEEccccccc--c-----Cc---chhHhhhhHHHHHHHHH
Q 047628 55 GQIVPMKFNPRD--------DNTIKATM-------AKANVVINLIGREYE--T-----RN---YSFEDVNHFMAERIAGI 109 (327)
Q Consensus 55 ~~v~~~~~Dl~~--------~~~~~~~~-------~~~d~vi~~a~~~~~--~-----~~---~~~~~~n~~~~~~l~~a 109 (327)
...+-+.+|+.+ .+++.+++ ..+|++||+||.... . +. ...+++|+.+..+++++
T Consensus 83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a 162 (299)
T PRK06300 83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSH 162 (299)
T ss_pred CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 011222222222 11233333 347999999975321 1 11 34668899988888887
Q ss_pred HHHcC-CcceEEEEeccCCCCCCC--c-hHHHhHHHHHHHHHhh--------CCCeEEEecCeeecCCChhH---HHHHH
Q 047628 110 AKEHG-GIMRFIQISCLGASSSSP--S-RVFSTKAAAEEAVLRE--------LPWATIMRPAAMIGTEDRLL---NKWAQ 174 (327)
Q Consensus 110 ~~~~~-~v~~~v~~Ss~~v~~~~~--~-~y~~~K~~~E~~~~~~--------~~~~~i~r~~~~~G~~~~~~---~~~~~ 174 (327)
+...= .-.++|.+||.......| . .|+.+|.+.+.+.+.. ++++..+.||.+--+....+ .....
T Consensus 163 ~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~ 242 (299)
T PRK06300 163 FGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIERMVD 242 (299)
T ss_pred HHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHHHHH
Confidence 75431 013688888765533333 2 7999999998877542 47788999987753211000 11111
Q ss_pred HHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CCCCceEEecCC
Q 047628 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TSMGKIYELGGP 224 (327)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~~v~~~ 224 (327)
.... ..+. ..+...+|++.+++.++.... ...|+++.+.++
T Consensus 243 ~~~~--~~p~-------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 243 YYQD--WAPL-------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred HHHh--cCCC-------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 1111 1111 134567999999999887533 226788888775
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=2.7e-10 Score=97.01 Aligned_cols=155 Identities=22% Similarity=0.245 Sum_probs=111.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccC--CC-CCeeEEeeCCCC-hhHHHHHhc---
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMG--DL-GQIVPMKFNPRD-DNTIKATMA--- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~--~~-~~v~~~~~Dl~~-~~~~~~~~~--- 75 (327)
.+++++++||||++-||..+++.|++.|+.|+++.|..+.. ........ .. ..+.+..+|+++ .+++..+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~ 81 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE 81 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence 35578999999999999999999999999999888876641 11111111 00 246777899998 877765553
Q ss_pred ----cccEEEEcccccccc---------CcchhHhhhhHHHHHHHHHHHHcCCcc--eEEEEeccCCCCCCC---chHHH
Q 047628 76 ----KANVVINLIGREYET---------RNYSFEDVNHFMAERIAGIAKEHGGIM--RFIQISCLGASSSSP---SRVFS 137 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~~~~~~v~--~~v~~Ss~~v~~~~~---~~y~~ 137 (327)
++|++||+||..... .-...+.+|+.+...+.+++... .+ ++|.+||.... ..+ ..|+.
T Consensus 82 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~--~~~~~Iv~isS~~~~-~~~~~~~~Y~~ 158 (251)
T COG1028 82 EEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPL--MKKQRIVNISSVAGL-GGPPGQAAYAA 158 (251)
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHh--hhhCeEEEECCchhc-CCCCCcchHHH
Confidence 379999999974321 11457788888888888854443 23 89999998765 332 58999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCee
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAM 161 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~ 161 (327)
+|.+.+.+.+.. ++.+..+.||.+
T Consensus 159 sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~ 189 (251)
T COG1028 159 SKAALIGLTKALALELAPRGIRVNAVAPGYI 189 (251)
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEEeccC
Confidence 999987766443 488999999944
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.22 E-value=4.2e-11 Score=95.68 Aligned_cols=156 Identities=19% Similarity=0.181 Sum_probs=103.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------ccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------ANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d~v 80 (327)
|+++|||||||+|. +++.|+++|++|++++|+++.............++..+.+|+.|++++.+++++ +|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 57999999998876 999999999999999998654322222121123678889999999998887753 4677
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcc----eEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEE
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM----RFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIM 156 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~----~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~ 156 (327)
|+.+- ..++.++.++|++.| ++ +|+++=+..+.. | +...+.... ....|.-+
T Consensus 80 v~~vh--------------~~~~~~~~~~~~~~g-v~~~~~~~~h~~gs~~~~--~------~~~~~~~~~-~~~~~~~i 135 (177)
T PRK08309 80 VAWIH--------------SSAKDALSVVCRELD-GSSETYRLFHVLGSAASD--P------RIPSEKIGP-ARCSYRRV 135 (177)
T ss_pred EEecc--------------ccchhhHHHHHHHHc-cCCCCceEEEEeCCcCCc--h------hhhhhhhhh-cCCceEEE
Confidence 76553 356789999999999 88 888776544421 1 222233322 23456666
Q ss_pred ecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 157 RPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 157 r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
..|.+.-. ...-|++-+.++..++.+++.+..
T Consensus 136 ~lgf~~~~-------------------------~~~rwlt~~ei~~gv~~~~~~~~~ 167 (177)
T PRK08309 136 ILGFVLED-------------------------TYSRWLTHEEISDGVIKAIESDAD 167 (177)
T ss_pred EEeEEEeC-------------------------CccccCchHHHHHHHHHHHhcCCC
Confidence 66655411 113445567777777777766543
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4e-10 Score=98.18 Aligned_cols=121 Identities=11% Similarity=0.031 Sum_probs=89.5
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
++..+|+||+|+|+.|.+|+.++..|..++ .+++++++..... ...+... .. .....+.++++++.+.++++|
T Consensus 3 ~~~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~--~~--~~~v~~~td~~~~~~~l~gaD 78 (321)
T PTZ00325 3 PSALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHI--DT--PAKVTGYADGELWEKALRGAD 78 (321)
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhc--Cc--CceEEEecCCCchHHHhCCCC
Confidence 345667899999999999999999988655 6899999832111 0011110 11 223345556666678899999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+||+++|.... .+..+....|...+.++++++++++ ++++|+++|-.+
T Consensus 79 vVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPv 128 (321)
T PTZ00325 79 LVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPV 128 (321)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcH
Confidence 99999998543 2346788899999999999999999 999999999554
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-09 Score=114.69 Aligned_cols=157 Identities=12% Similarity=-0.005 Sum_probs=115.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCc----------h------------------------------
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDD----------P------------------------------ 45 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~----------~------------------------------ 45 (327)
.+.+|||||++-||..++++|+++ |.+|+++.|++... .
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence 578999999999999999999988 69999999983100 0
Q ss_pred -------hhhcccC-CCCCeeEEeeCCCChhHHHHHhc------cccEEEEcccccccc-----Cc---chhHhhhhHHH
Q 047628 46 -------RHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------KANVVINLIGREYET-----RN---YSFEDVNHFMA 103 (327)
Q Consensus 46 -------~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~ 103 (327)
..+..+. ...++.++.+|++|.+++.++++ .+|.|||+||..... .. ...+++|+.++
T Consensus 2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813 2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 0000000 01357889999999998887764 379999999975321 11 34789999999
Q ss_pred HHHHHHHHHcCCcceEEEEeccCCC-CC-CCchHHHhHHHHHHHHHhh-----CCCeEEEecCeeecC
Q 047628 104 ERIAGIAKEHGGIMRFIQISCLGAS-SS-SPSRVFSTKAAAEEAVLRE-----LPWATIMRPAAMIGT 164 (327)
Q Consensus 104 ~~l~~a~~~~~~v~~~v~~Ss~~v~-~~-~~~~y~~~K~~~E~~~~~~-----~~~~~i~r~~~~~G~ 164 (327)
.++++++.... .++||++||.... +. ....|+.+|...+.+.+.. +.++..+.+|.+-|.
T Consensus 2157 ~~Ll~al~~~~-~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2157 LSLLAALNAEN-IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred HHHHHHHHHhC-CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 99999998876 6789999997543 22 2368999998887766543 267788888877543
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.2e-09 Score=92.01 Aligned_cols=197 Identities=13% Similarity=0.040 Sum_probs=131.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC---CCCCeeEEeeCCCChhHHHHHhcc-------c
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG---DLGQIVPMKFNPRDDNTIKATMAK-------A 77 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~~~~~~~~-------~ 77 (327)
.+|+|||++.-+|..++..+..+|.+|+++.|+..+..+....++ +...+.+..+|+.+.+++...+++ +
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 589999999999999999999999999999999887654443332 223466889999998888777643 5
Q ss_pred cEEEEccccccc-----cCc---chhHhhhhHHHHHHHHHHHHcCC----cceEEEEeccCCCCC--CCchHHHhHHHHH
Q 047628 78 NVVINLIGREYE-----TRN---YSFEDVNHFMAERIAGIAKEHGG----IMRFIQISCLGASSS--SPSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~-----~~~---~~~~~~n~~~~~~l~~a~~~~~~----v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E 143 (327)
|.+|+|||..-. .++ +...++|..++.+++.++...-+ ..+++.+||..+.-. ..+.|..+|.+.-
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alr 193 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALR 193 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHH
Confidence 999999998422 222 45778999999999987754321 237888888544211 1245666665543
Q ss_pred HHH----H---hhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 144 EAV----L---RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 144 ~~~----~---~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
-+. + ..++.++..-|+.+.-|+-. +.-+..+.....-. ...+.+..+++|.+++.=+.++.
T Consensus 194 gLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE------~En~tkP~~t~ii~--g~ss~~~~e~~a~~~~~~~~rg~ 261 (331)
T KOG1210|consen 194 GLAEALRQELIKYGVHVTLYYPPDTLTPGFE------RENKTKPEETKIIE--GGSSVIKCEEMAKAIVKGMKRGN 261 (331)
T ss_pred HHHHHHHHHHhhcceEEEEEcCCCCCCCccc------cccccCchheeeec--CCCCCcCHHHHHHHHHhHHhhcC
Confidence 332 2 23588888888877755310 01111122221111 12355888999999987776554
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.08 E-value=6.1e-10 Score=98.29 Aligned_cols=99 Identities=23% Similarity=0.341 Sum_probs=80.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
||+|||+|+ |++|+.++..|+++| .+|++.+|+.++..+...... ++++.++.|..+.+.+.+++++.|+||++++
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~--~~v~~~~vD~~d~~al~~li~~~d~VIn~~p 77 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG--GKVEALQVDAADVDALVALIKDFDLVINAAP 77 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc--ccceeEEecccChHHHHHHHhcCCEEEEeCC
Confidence 578999999 999999999999998 899999999877544333222 3799999999999999999999999999997
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+.. ..+++++|.++| + +++=+|-
T Consensus 78 ~~~--------------~~~i~ka~i~~g-v-~yvDts~ 100 (389)
T COG1748 78 PFV--------------DLTILKACIKTG-V-DYVDTSY 100 (389)
T ss_pred chh--------------hHHHHHHHHHhC-C-CEEEccc
Confidence 642 247888888888 5 5554443
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.3e-09 Score=83.63 Aligned_cols=86 Identities=17% Similarity=0.198 Sum_probs=64.6
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+.+.++.++||||+|.||..+++.|++.|++|++++|+.+.......... ......++.+|+++.+++.++++
T Consensus 12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~ 91 (169)
T PRK06720 12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF 91 (169)
T ss_pred cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44456899999999999999999999999999999988654322111111 11346778999999988876542
Q ss_pred -cccEEEEcccccc
Q 047628 76 -KANVVINLIGREY 88 (327)
Q Consensus 76 -~~d~vi~~a~~~~ 88 (327)
.+|.+||+||...
T Consensus 92 G~iDilVnnAG~~~ 105 (169)
T PRK06720 92 SRIDMLFQNAGLYK 105 (169)
T ss_pred CCCCEEEECCCcCC
Confidence 4799999998743
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.3e-08 Score=85.96 Aligned_cols=154 Identities=17% Similarity=0.142 Sum_probs=105.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhH----HHHHhcc--cc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNT----IKATMAK--AN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~----~~~~~~~--~d 78 (327)
.=.+|||||.-||+..+++|.++|++|++++|+.++...-.+ .... .++..+..|.++++. +.+.+.+ +-
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~-vev~~i~~Dft~~~~~ye~i~~~l~~~~Vg 128 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYK-VEVRIIAIDFTKGDEVYEKLLEKLAGLDVG 128 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhC-cEEEEEEEecCCCchhHHHHHHHhcCCceE
Confidence 457899999999999999999999999999999988643332 2222 468889999987665 4555555 46
Q ss_pred EEEEccccccccC------c----chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 79 VVINLIGREYETR------N----YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 79 ~vi~~a~~~~~~~------~----~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
++||++|+..+.. + .....+|..++..+.+.. .+.+ -.-+|.+||...-.+.| +.|+.+|...
T Consensus 129 ILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p~~s~ysasK~~v 207 (312)
T KOG1014|consen 129 ILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTPLLSVYSASKAFV 207 (312)
T ss_pred EEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccChhHHHHHHHHHHH
Confidence 8999999876431 1 234455665544444433 3333 23688999876655555 7899999866
Q ss_pred HHHHHh-------hCCCeEEEecCeeec
Q 047628 143 EEAVLR-------ELPWATIMRPAAMIG 163 (327)
Q Consensus 143 E~~~~~-------~~~~~~i~r~~~~~G 163 (327)
+.+-.. .++.+-.+-|..|-.
T Consensus 208 ~~~S~~L~~Ey~~~gI~Vq~v~p~~VaT 235 (312)
T KOG1014|consen 208 DFFSRCLQKEYESKGIFVQSVIPYLVAT 235 (312)
T ss_pred HHHHHHHHHHHHhcCeEEEEeehhheec
Confidence 555433 246666666666643
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.5e-08 Score=89.02 Aligned_cols=163 Identities=10% Similarity=0.033 Sum_probs=102.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-------CEEEEeeCCCCCchhhhcccCCCCCee-EEeeCCCChhHHHHHhcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-------SQVLVPFRGCEDDPRHLKLMGDLGQIV-PMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~d 78 (327)
..+|+||||+|++|++++..|+..+ .+++++++++......-... +..... ....|+....++.+.++++|
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~-Dl~d~~~~~~~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVM-ELQDCAFPLLKSVVATTDPEEAFKDVD 80 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceee-ehhhccccccCCceecCCHHHHhCCCC
Confidence 3589999999999999999998844 58999999654211100000 000000 12234444567778899999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCC---------CCCCC------chHHHhHH
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGA---------SSSSP------SRVFSTKA 140 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v---------~~~~~------~~y~~~K~ 140 (327)
+|||+||.... ....+.++.|+...+.+.+.++++. +-..++.+|...- ....| ..+..+.+
T Consensus 81 iVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~~~~ig~gt~LDs~R 160 (325)
T cd01336 81 VAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIPKENFTALTRLDHNR 160 (325)
T ss_pred EEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCCHHHEEeeehHHHHH
Confidence 99999998654 2346788999999999999888874 2224555554210 01111 12334444
Q ss_pred HHHHHHHhhCCCeEEEecCeeecC-CChhHH
Q 047628 141 AAEEAVLRELPWATIMRPAAMIGT-EDRLLN 170 (327)
Q Consensus 141 ~~E~~~~~~~~~~~i~r~~~~~G~-~~~~~~ 170 (327)
....+.+.++++..-++-..++|. ++..++
T Consensus 161 ~r~~la~~l~v~~~~v~~~~V~GeHG~s~~~ 191 (325)
T cd01336 161 AKSQIALKLGVPVSDVKNVIIWGNHSSTQYP 191 (325)
T ss_pred HHHHHHHHhCcChhhceEeEEEEcCCCCeee
Confidence 545555566777777776677786 444333
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.3e-08 Score=88.76 Aligned_cols=118 Identities=13% Similarity=0.111 Sum_probs=86.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+.||+|+|++|.+|+.++..|..++ .++++++++. . ......+... .......++.+.+++.+.++++|+|||+|
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~-~g~a~Dl~~~-~~~~~i~~~~~~~d~~~~l~~aDiVVitA 94 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-T-PGVAADVSHI-NTPAQVRGFLGDDQLGDALKGADLVIIPA 94 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-C-CeeEchhhhC-CcCceEEEEeCCCCHHHHcCCCCEEEEeC
Confidence 4689999999999999999998766 4899999876 2 1111111100 01112234334556788999999999999
Q ss_pred ccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 85 GREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 85 ~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
|.... ....+....|...+.++.+.+++++ .+.+++++|--++
T Consensus 95 G~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD 139 (323)
T PLN00106 95 GVPRKPGMTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVN 139 (323)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCcc
Confidence 98543 3346788899999999999999999 8899999985554
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.9e-08 Score=76.14 Aligned_cols=205 Identities=18% Similarity=0.196 Sum_probs=134.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------ccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------ANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d~ 79 (327)
.-..+|||+..-+|...++.|..+|..|.+++-..++-....++++ .++.+...|+++++++..++.. .|+
T Consensus 9 glvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg--~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 9 GLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG--GKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred CeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC--CceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 3467899999999999999999999999999988777655556666 5789999999999999888753 599
Q ss_pred EEEccccccc-------cCc-------chhHhhhhHHHHHHHHHHHH--------cCCcceEEEEeccCC--C-CC-CCc
Q 047628 80 VINLIGREYE-------TRN-------YSFEDVNHFMAERIAGIAKE--------HGGIMRFIQISCLGA--S-SS-SPS 133 (327)
Q Consensus 80 vi~~a~~~~~-------~~~-------~~~~~~n~~~~~~l~~a~~~--------~~~v~~~v~~Ss~~v--~-~~-~~~ 133 (327)
.++|||.... ... ....++|+.+|.|+++.-.. .+ -+|=|.+.+.++ . ++ ...
T Consensus 87 ~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~-gqrgviintasvaafdgq~gqa 165 (260)
T KOG1199|consen 87 LVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQN-GQRGVIINTASVAAFDGQTGQA 165 (260)
T ss_pred eeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCC-CcceEEEeeceeeeecCccchh
Confidence 9999997421 011 23456788899998875431 11 134344444433 2 22 237
Q ss_pred hHHHhHHHHHHH----HHh---hCCCeEEEecCeeecCCChhHHH-HHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 134 RVFSTKAAAEEA----VLR---ELPWATIMRPAAMIGTEDRLLNK-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 134 ~y~~~K~~~E~~----~~~---~~~~~~i~r~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.|..+|.++--+ .+. -++++..+.||.+--|--..++. ....+.+. +|.+ ...-|..+.+..+-
T Consensus 166 aysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~--ipfp------srlg~p~eyahlvq 237 (260)
T KOG1199|consen 166 AYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQL--IPFP------SRLGHPHEYAHLVQ 237 (260)
T ss_pred hhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHh--CCCc------hhcCChHHHHHHHH
Confidence 899888765322 122 24888888888764332122222 22222222 3332 23345577788888
Q ss_pred HHhhcCCCCCCceEEecC
Q 047628 206 AALKDDGTSMGKIYELGG 223 (327)
Q Consensus 206 ~~l~~~~~~~~~~~~v~~ 223 (327)
.+++++-- +|++.-+.+
T Consensus 238 aiienp~l-ngevir~dg 254 (260)
T KOG1199|consen 238 AIIENPYL-NGEVIRFDG 254 (260)
T ss_pred HHHhCccc-CCeEEEecc
Confidence 88888876 777776655
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.73 E-value=5.3e-08 Score=81.29 Aligned_cols=93 Identities=14% Similarity=0.183 Sum_probs=58.6
Q ss_pred cCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC--hhHHHHHhccccEEEEccccccccC
Q 047628 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD--DNTIKATMAKANVVINLIGREYETR 91 (327)
Q Consensus 14 GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~--~~~~~~~~~~~d~vi~~a~~~~~~~ 91 (327)
.+|||+|++|+++|+++|++|+++.|........ ..+++++.++..+ .+.+.+.+.++|+|||+||......
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~------~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvsd~~~ 96 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEP------HPNLSIIEIENVDDLLETLEPLVKDHDVLIHSMAVSDYTP 96 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEEEEEECcccccCCC------CCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCCccCCcee
Confidence 4589999999999999999999998764321100 0246666654322 2456666778999999999864222
Q ss_pred cchhHhhhhHHHHHHHHHHHH
Q 047628 92 NYSFEDVNHFMAERIAGIAKE 112 (327)
Q Consensus 92 ~~~~~~~n~~~~~~l~~a~~~ 112 (327)
....-..+...+.++.++++.
T Consensus 97 ~~~~~~~~~~~~~~v~~~~~~ 117 (229)
T PRK06732 97 VYMTDLEEVSASDNLNEFLTK 117 (229)
T ss_pred hhhhhhhhhhhhhhhhhhhcc
Confidence 111112234444556666654
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=3.6e-08 Score=82.01 Aligned_cols=79 Identities=16% Similarity=0.245 Sum_probs=55.9
Q ss_pred CCcEEEEEcCC----------------CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhH
Q 047628 6 SGIIATVFGTT----------------GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69 (327)
Q Consensus 6 ~~~~ilI~Gat----------------G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~ 69 (327)
..++||||+|. ||+|++|+++|+++|++|+++.+........... ...+..+.+|....+.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~---~~~~~~V~s~~d~~~~ 78 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINN---QLELHPFEGIIDLQDK 78 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCC---ceeEEEEecHHHHHHH
Confidence 46899999885 9999999999999999999998753321111110 0124455664333467
Q ss_pred HHHHhc--cccEEEEccccc
Q 047628 70 IKATMA--KANVVINLIGRE 87 (327)
Q Consensus 70 ~~~~~~--~~d~vi~~a~~~ 87 (327)
+.++++ ++|+|||+|+..
T Consensus 79 l~~~~~~~~~D~VIH~AAvs 98 (229)
T PRK09620 79 MKSIITHEKVDAVIMAAAGS 98 (229)
T ss_pred HHHHhcccCCCEEEECcccc
Confidence 777784 589999999984
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.2e-07 Score=83.01 Aligned_cols=113 Identities=16% Similarity=0.135 Sum_probs=79.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHh-C--CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAK-M--GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~-~--g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|||+|+||||.+|++++..|.. . ++++++++|++.. ..........+....+.+ .+.+++.+.++++|+||.|+
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~~~~~~~~i~~--~~~~d~~~~l~~~DiVIita 77 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLSHIPTAVKIKG--FSGEDPTPALEGADVVLISA 77 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhhcCCCCceEEE--eCCCCHHHHcCCCCEEEEcC
Confidence 6899999999999999988854 2 4688888887432 110001111011122333 22345566778999999999
Q ss_pred cccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 85 GREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 85 ~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|..... ...+....|.....++++++++++ .+++|.+.|
T Consensus 78 G~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvs 118 (312)
T PRK05086 78 GVARKPGMDRSDLFNVNAGIVKNLVEKVAKTC-PKACIGIIT 118 (312)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcc
Confidence 985442 346788889999999999999998 888888887
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.71 E-value=5.9e-08 Score=88.07 Aligned_cols=94 Identities=23% Similarity=0.365 Sum_probs=68.4
Q ss_pred EEEEcCCCccHHHHHHHHHhCC-C-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMG-S-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g-~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+|+|+ |++|+.+++.|++++ + +|++.+|+.++........ ...+++.++.|+.|++++.++++++|+||||+++.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~ 78 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPF 78 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCEEEECCccc
Confidence 799999 999999999999986 4 8999999987754443321 12479999999999999999999999999999874
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEE
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~ 121 (327)
. ...++++|.+.| + ++|=
T Consensus 79 ~--------------~~~v~~~~i~~g-~-~yvD 96 (386)
T PF03435_consen 79 F--------------GEPVARACIEAG-V-HYVD 96 (386)
T ss_dssp G--------------HHHHHHHHHHHT---EEEE
T ss_pred h--------------hHHHHHHHHHhC-C-Ceec
Confidence 1 135677777766 3 4444
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.7e-07 Score=79.16 Aligned_cols=96 Identities=15% Similarity=0.201 Sum_probs=73.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~ 85 (327)
|+|||+||||. |+.|++.|.+.|++|++.+|+...... +... ....+..+..+.+++.+.+++ +|+||+.+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~-~~~~----g~~~v~~g~l~~~~l~~~l~~~~i~~VIDAtH 74 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHL-YPIH----QALTVHTGALDPQELREFLKRHSIDILVDATH 74 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccc-cccc----CCceEEECCCCHHHHHHHHHhcCCCEEEEcCC
Confidence 68999999999 999999999999999999998865322 2211 133455666677888888864 899999987
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEE
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~ 121 (327)
+.. ...+.++.++|++.| +..+=|
T Consensus 75 PfA-----------~~is~~a~~a~~~~~-ipylR~ 98 (256)
T TIGR00715 75 PFA-----------AQITTNATAVCKELG-IPYVRF 98 (256)
T ss_pred HHH-----------HHHHHHHHHHHHHhC-CcEEEE
Confidence 542 256789999999999 765544
|
This enzyme was found to be a monomer by gel filtration. |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.8e-08 Score=78.56 Aligned_cols=82 Identities=23% Similarity=0.200 Sum_probs=63.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++++|+||+|.+|+.+++.|.+.|++|++++|+.++............+.....+|..+.+++.++++++|+||++.
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at 105 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG 105 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence 45689999999999999999999999999999999865533222222111134566778889999999999999999986
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
+.
T Consensus 106 ~~ 107 (194)
T cd01078 106 AA 107 (194)
T ss_pred CC
Confidence 54
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.1e-06 Score=71.91 Aligned_cols=159 Identities=9% Similarity=-0.003 Sum_probs=108.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-----CEEEEeeCCCCCchhhhcc---cCC--CCCeeEEeeCCCChhHHHHHh
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-----SQVLVPFRGCEDDPRHLKL---MGD--LGQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-----~~V~~~~R~~~~~~~~~~~---~~~--~~~v~~~~~Dl~~~~~~~~~~ 74 (327)
|+.+.++|||++..+|-+++.+|++.. ..+.+..|+.++....... ... ..+++++..|+++-.++.++.
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~ 80 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS 80 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence 345678999999999999999999864 2467778988876443322 111 246889999999877666554
Q ss_pred -------ccccEEEEcccccccc--------------------Cc---------------chhHhhhhHHHHHHHHHHHH
Q 047628 75 -------AKANVVINLIGREYET--------------------RN---------------YSFEDVNHFMAERIAGIAKE 112 (327)
Q Consensus 75 -------~~~d~vi~~a~~~~~~--------------------~~---------------~~~~~~n~~~~~~l~~a~~~ 112 (327)
+..|.|+-+||+.... ++ ...++.|+-|..-++.....
T Consensus 81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p 160 (341)
T KOG1478|consen 81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP 160 (341)
T ss_pred HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence 4569999999863210 00 24667788776666654432
Q ss_pred ---cCCcceEEEEeccCCCCCCC-----------chHHHhHHHHHHHHHh-------hCCCeEEEecCeeec
Q 047628 113 ---HGGIMRFIQISCLGASSSSP-----------SRVFSTKAAAEEAVLR-------ELPWATIMRPAAMIG 163 (327)
Q Consensus 113 ---~~~v~~~v~~Ss~~v~~~~~-----------~~y~~~K~~~E~~~~~-------~~~~~~i~r~~~~~G 163 (327)
++.-..+|.+||..+....- .+|..+|+..+-+--. .|+.-.++.||....
T Consensus 161 ll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt 232 (341)
T KOG1478|consen 161 LLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTT 232 (341)
T ss_pred HhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeec
Confidence 22234899999987754332 6899999988755322 246778888887764
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.54 E-value=4.1e-07 Score=73.27 Aligned_cols=153 Identities=15% Similarity=0.081 Sum_probs=96.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEe--eCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh---c----cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVP--FRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM---A----KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~--~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~---~----~~ 77 (327)
.+-|||||++--||..++..+.+.+.+.... .|............+ .......+|++....+.+.. + .-
T Consensus 6 r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~g--d~~v~~~g~~~e~~~l~al~e~~r~k~gkr 83 (253)
T KOG1204|consen 6 RKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYG--DDFVHVVGDITEEQLLGALREAPRKKGGKR 83 (253)
T ss_pred ceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEec--CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence 4678999999999999999999988664443 443322111100111 11222334444433333222 1 24
Q ss_pred cEEEEccccccccC-----c------chhHhhhhHHHHHHHHHHHHc--C-C-cceEEEEeccCCCCCCC--chHHHhHH
Q 047628 78 NVVINLIGREYETR-----N------YSFEDVNHFMAERIAGIAKEH--G-G-IMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----~------~~~~~~n~~~~~~l~~a~~~~--~-~-v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
|.|||+||...+.. . ..+++.|+.....|...+... + + .+.+|++||.......+ ..|+.+|+
T Consensus 84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~Ka 163 (253)
T KOG1204|consen 84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSKA 163 (253)
T ss_pred eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhHH
Confidence 99999999853311 1 358889998888887766442 1 1 25789999976654444 67999999
Q ss_pred HHHHHHHhhC------CCeEEEecCee
Q 047628 141 AAEEAVLREL------PWATIMRPAAM 161 (327)
Q Consensus 141 ~~E~~~~~~~------~~~~i~r~~~~ 161 (327)
+.+.+.+..+ +.+..++||.+
T Consensus 164 Ar~m~f~~lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 164 ARNMYFMVLASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred HHHHHHHHHhhcCccceeEEEccCCcc
Confidence 9999987653 66788888866
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.9e-07 Score=79.88 Aligned_cols=79 Identities=22% Similarity=0.420 Sum_probs=65.8
Q ss_pred EEEEEcCCCccHHHHHHHHHh----CCCEEEEeeCCCCCchhhhcccCC-----CCCeeEEeeCCCChhHHHHHhccccE
Q 047628 9 IATVFGTTGFLGRYVVQQLAK----MGSQVLVPFRGCEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
.++|.|||||.|..+++++.. .|..+-+..|++.+..+-++..+. .+...++.+|..|++++.+..+.+.+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 589999999999999999998 578888999998886655543321 23344889999999999999999999
Q ss_pred EEEccccc
Q 047628 80 VINLIGRE 87 (327)
Q Consensus 80 vi~~a~~~ 87 (327)
|+||+|+-
T Consensus 87 ivN~vGPy 94 (423)
T KOG2733|consen 87 IVNCVGPY 94 (423)
T ss_pred EEeccccc
Confidence 99999984
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.49 E-value=1.3e-06 Score=76.62 Aligned_cols=102 Identities=8% Similarity=-0.005 Sum_probs=73.6
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC-------CEEEEeeCCC--CCchhhhcccCCCCCeeEEeeCCCCh-----------h
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG-------SQVLVPFRGC--EDDPRHLKLMGDLGQIVPMKFNPRDD-----------N 68 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g-------~~V~~~~R~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~-----------~ 68 (327)
||.|+||+|.+|+.++..|...| +++++++++. +.. +....|+.+. .
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~-------------~g~~~Dl~d~~~~~~~~~~i~~ 68 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL-------------EGVVMELQDCAFPLLKGVVITT 68 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc-------------ceeeeehhhhcccccCCcEEec
Confidence 79999999999999999988765 2599998876 321 1112222221 3
Q ss_pred HHHHHhccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHc-CCcceEEEEe
Q 047628 69 TIKATMAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQIS 123 (327)
Q Consensus 69 ~~~~~~~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~S 123 (327)
...+.++++|+|||+||.... .+..+....|....+.+.+.+++. ++-..++.+|
T Consensus 69 ~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 69 DPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred ChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 456788999999999998543 344678889999999999999888 3333455555
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.39 E-value=3.2e-06 Score=74.27 Aligned_cols=104 Identities=9% Similarity=-0.013 Sum_probs=73.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC-------CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh-----------HH
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG-------SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN-----------TI 70 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~-----------~~ 70 (327)
+|.|+|++|.+|++++..|...+ ++++++++.+.... .+....|+.+.. ..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~-----------a~g~~~Dl~d~~~~~~~~~~~~~~~ 69 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKV-----------LEGVVMELMDCAFPLLDGVVPTHDP 69 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccc-----------cceeEeehhcccchhcCceeccCCh
Confidence 58999999999999999998754 26999988654321 111222332221 33
Q ss_pred HHHhccccEEEEcccccccc--CcchhHhhhhHHHHHHHHHHHHc-CCcceEEEEe
Q 047628 71 KATMAKANVVINLIGREYET--RNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQIS 123 (327)
Q Consensus 71 ~~~~~~~d~vi~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~S 123 (327)
.+.++++|+||++||..... ...+....|+...+.+.+.++++ ++-..++.+|
T Consensus 70 ~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 70 AVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred HHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 56788999999999986442 24678889999999999999988 3323455555
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.2e-06 Score=74.48 Aligned_cols=83 Identities=19% Similarity=0.246 Sum_probs=64.1
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|++++. ..++|-|||||.|.-++++|..+|.+..+..|+..+.......++ ++...+ ++.+++.+.+.++.+++|
T Consensus 1 ~~~e~e-~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG--~~~~~~--p~~~p~~~~~~~~~~~VV 75 (382)
T COG3268 1 MPMERE-YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLG--PEAAVF--PLGVPAALEAMASRTQVV 75 (382)
T ss_pred CCCCcc-eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcC--cccccc--CCCCHHHHHHHHhcceEE
Confidence 444443 679999999999999999999999999888998877554444444 233333 334589999999999999
Q ss_pred EEcccccc
Q 047628 81 INLIGREY 88 (327)
Q Consensus 81 i~~a~~~~ 88 (327)
+||+|+..
T Consensus 76 lncvGPyt 83 (382)
T COG3268 76 LNCVGPYT 83 (382)
T ss_pred Eecccccc
Confidence 99999843
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=1.1e-05 Score=71.36 Aligned_cols=79 Identities=13% Similarity=0.121 Sum_probs=58.5
Q ss_pred CcEEEEEcCCCccHHH--HHHHHHhCCCEEEEeeCCCCCch---------------hhhcccCCCCCeeEEeeCCCChhH
Q 047628 7 GIIATVFGTTGFLGRY--VVQQLAKMGSQVLVPFRGCEDDP---------------RHLKLMGDLGQIVPMKFNPRDDNT 69 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~--l~~~Ll~~g~~V~~~~R~~~~~~---------------~~~~~~~~~~~v~~~~~Dl~~~~~ 69 (327)
.+++||||+++-+|.+ ++++| +.|.+|.++++..+... ......+ ..+..+.+|+.++++
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G--~~a~~i~~DVss~E~ 117 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG--LYAKSINGDAFSDEI 117 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC--CceEEEEcCCCCHHH
Confidence 5799999999999999 89999 99999988885432211 1111212 246678999999988
Q ss_pred HHHHhc-------cccEEEEcccccc
Q 047628 70 IKATMA-------KANVVINLIGREY 88 (327)
Q Consensus 70 ~~~~~~-------~~d~vi~~a~~~~ 88 (327)
+.++++ ++|++||+++...
T Consensus 118 v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 118 KQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCC
Confidence 776653 4799999998753
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.3e-07 Score=70.49 Aligned_cols=110 Identities=13% Similarity=0.128 Sum_probs=74.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccC---CCCCee-EEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMG---DLGQIV-PMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~---~~~~v~-~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
|||.|+|++|.+|++++..|...+ .++++++++..........+. ...... .+.. .+ .+.++++|+||
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~----~~~~~~aDivv 74 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GD----YEALKDADIVV 74 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SS----GGGGTTESEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cc----ccccccccEEE
Confidence 689999999999999999999886 589999998654322111110 001111 1111 22 33567899999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
-++|.... .+..+....|....+.+.+.+.+.++-..++.+|
T Consensus 75 itag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 75 ITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp ETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 99997543 3446788899999999999999987322444444
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.32 E-value=6.6e-06 Score=72.23 Aligned_cols=161 Identities=9% Similarity=0.015 Sum_probs=104.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-------EEEEeeCCCCC--chhhhcccCCC-----CCeeEEeeCCCChhHHHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-------QVLVPFRGCED--DPRHLKLMGDL-----GQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~--~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~ 72 (327)
.+||.|+|++|.+|+.++..|+..|. ++.+++..... .......+... .++++ . ....+
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-----~--~~~~~ 74 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVI-----T--DDPNV 74 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEE-----e--cCcHH
Confidence 46899999999999999999998774 79999885433 21111111100 11221 1 12245
Q ss_pred HhccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCC-cceEEEEeccCC---------CCCCC--chHHHh
Q 047628 73 TMAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGG-IMRFIQISCLGA---------SSSSP--SRVFST 138 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~-v~~~v~~Ss~~v---------~~~~~--~~y~~~ 138 (327)
.++++|+||.+||.... .+..+....|....+.+.+.++++++ -..++.+|...- .+.-| ..|+.+
T Consensus 75 ~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~p~~~ViG~t 154 (322)
T cd01338 75 AFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDIPPDNFTAMT 154 (322)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCCChHheEEeh
Confidence 67899999999998543 34467889999999999999998872 335566654210 11122 467777
Q ss_pred HHHHHHHHHh----hCCCeEEEecCeeecCC-ChhHHHHHH
Q 047628 139 KAAAEEAVLR----ELPWATIMRPAAMIGTE-DRLLNKWAQ 174 (327)
Q Consensus 139 K~~~E~~~~~----~~~~~~i~r~~~~~G~~-~~~~~~~~~ 174 (327)
++..+++-.. .+++...+|...+||+. +..++.|..
T Consensus 155 ~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~s~vp~~S~ 195 (322)
T cd01338 155 RLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSPTQYPDFTN 195 (322)
T ss_pred HHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcccEEEehhh
Confidence 7777766543 35888889988899984 333444443
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.1e-06 Score=76.86 Aligned_cols=74 Identities=19% Similarity=0.151 Sum_probs=53.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhC-C-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKM-G-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~-g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
.+..++|+||||+|+||+.++++|+++ | .+++++.|+.++...... ++..+|+ ..+.+++.++|+||
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~--------el~~~~i---~~l~~~l~~aDiVv 220 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQA--------ELGGGKI---LSLEEALPEADIVV 220 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHH--------HhccccH---HhHHHHHccCCEEE
Confidence 355789999999999999999999865 5 689999987654332211 1112333 34667888999999
Q ss_pred Ecccccc
Q 047628 82 NLIGREY 88 (327)
Q Consensus 82 ~~a~~~~ 88 (327)
|+++...
T Consensus 221 ~~ts~~~ 227 (340)
T PRK14982 221 WVASMPK 227 (340)
T ss_pred ECCcCCc
Confidence 9998743
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.25 E-value=7e-06 Score=68.38 Aligned_cols=75 Identities=20% Similarity=0.286 Sum_probs=62.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~ 86 (327)
|+++|.|+ |.+|.++++.|.+.|++|.++.++++......... .....+.+|-++++.|.++ ++++|+++-+.+.
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~---~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE---LDTHVVIGDATDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh---cceEEEEecCCCHHHHHhcCCCcCCEEEEeeCC
Confidence 68999999 99999999999999999999999987644322211 2488999999999999998 7889999977654
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.25 E-value=4.4e-05 Score=61.88 Aligned_cols=212 Identities=17% Similarity=0.190 Sum_probs=121.2
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+..+++||+|-. --|+..+++.|.++|.++......+ +..+.++++. ..+.-.+++||+++.+++..++.
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~ 82 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW 82 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence 567899999864 5689999999999999988877665 3333333222 11234568999999998888775
Q ss_pred -cccEEEEccccccccC---------cchh---HhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYETR---------NYSF---EDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~---------~~~~---~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
..|.++|+.+..+.+. .+.+ .++.......++++++..= +-..++-+|=.+...--| +.-+.+|
T Consensus 83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvAK 162 (259)
T COG0623 83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAK 162 (259)
T ss_pred CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHHH
Confidence 3699999998754211 1111 1222222333444443320 012444444333332233 5778899
Q ss_pred HHHHHHHHhhC-------CCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLREL-------PWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~~~-------~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.|..++-.. +++..+-.|.+=--.. ..+..+.....+.. |+ ...+..+||+...+.++.
T Consensus 163 AaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~a--Pl-------~r~vt~eeVG~tA~fLlS 233 (259)
T COG0623 163 AALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANA--PL-------RRNVTIEEVGNTAAFLLS 233 (259)
T ss_pred HHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhC--Cc-------cCCCCHHHhhhhHHHHhc
Confidence 99999887542 4444444443310001 11222222222221 22 234567888888777776
Q ss_pred cCCC-CCCceEEecCCcc
Q 047628 210 DDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~~ 226 (327)
+-.. ..|++.++.++-.
T Consensus 234 dLssgiTGei~yVD~G~~ 251 (259)
T COG0623 234 DLSSGITGEIIYVDSGYH 251 (259)
T ss_pred chhcccccceEEEcCCce
Confidence 5321 2588888887654
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.2e-06 Score=72.18 Aligned_cols=116 Identities=14% Similarity=0.114 Sum_probs=73.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCC--CCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGC--EDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~--~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|||.|+|+||.+|..++..|+..|+ +|++++|.. +........+.+.--......++.-..+. +.++++|+||-+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence 6899999999999999999999885 599999954 22211111110000000000011111112 348899999999
Q ss_pred ccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 84 IGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 84 a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+|.+... +..+....|....+.+++.+.+.++-..+|..++
T Consensus 80 ag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 80 AGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 9975432 3356778899999999998888763235666665
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.22 E-value=5.5e-06 Score=74.28 Aligned_cols=101 Identities=12% Similarity=0.095 Sum_probs=65.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHH-HhccccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKA-TMAKANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-~~~~~d~vi~~ 83 (327)
++|+|+|+||||++|+.|++.|+++ ++++..+.+..+.. +.+... .......|..+.+.+.. .++++|+||.+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG-~~i~~~----~~~l~~~~~~~~~~~~~~~~~~~DvVf~A 111 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAG-QSFGSV----FPHLITQDLPNLVAVKDADFSDVDAVFCC 111 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcC-CCchhh----CccccCccccceecCCHHHhcCCCEEEEc
Confidence 4579999999999999999999988 67999998864432 111110 11122234332222222 25789999988
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
.+. .....++.++ +.| .++|-.|+..-.
T Consensus 112 lp~--------------~~s~~i~~~~-~~g--~~VIDlSs~fRl 139 (381)
T PLN02968 112 LPH--------------GTTQEIIKAL-PKD--LKIVDLSADFRL 139 (381)
T ss_pred CCH--------------HHHHHHHHHH-hCC--CEEEEcCchhcc
Confidence 754 2345677776 456 589999987654
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.18 E-value=7.6e-06 Score=73.77 Aligned_cols=73 Identities=11% Similarity=0.121 Sum_probs=57.7
Q ss_pred cCCcEEEEEcC----------------CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh
Q 047628 5 YSGIIATVFGT----------------TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68 (327)
Q Consensus 5 ~~~~~ilI~Ga----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~ 68 (327)
+..+++||||| ||.+|.+++++|.++|++|+++.++.+... + .....+|+++.+
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~~---------~-~~~~~~dv~~~~ 255 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLPT---------P-AGVKRIDVESAQ 255 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccccC---------C-CCcEEEccCCHH
Confidence 56789999999 999999999999999999999988753211 1 113467888888
Q ss_pred HHHHHh----ccccEEEEccccc
Q 047628 69 TIKATM----AKANVVINLIGRE 87 (327)
Q Consensus 69 ~~~~~~----~~~d~vi~~a~~~ 87 (327)
++.+++ .++|++||+||..
T Consensus 256 ~~~~~v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 256 EMLDAVLAALPQADIFIMAAAVA 278 (399)
T ss_pred HHHHHHHHhcCCCCEEEEccccc
Confidence 777665 3589999999974
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.10 E-value=2.6e-05 Score=69.61 Aligned_cols=100 Identities=14% Similarity=0.164 Sum_probs=58.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCC------CCC-eeEEeeCCCChhHHHHHhcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGD------LGQ-IVPMKFNPRDDNTIKATMAK 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~------~~~-v~~~~~Dl~~~~~~~~~~~~ 76 (327)
||+++|+|+||||++|+.|++.|++.. .++.++.++.+.....+..... ... ..-+...-.+++. +++
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~~G~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~ 76 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERSAGKTYGEAVRWQLDGPIPEEVADMEVVSTDPEA----VDD 76 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhhcCCcccccccccccccccccccceEEEeCCHHH----hcC
Confidence 446899999999999999999999875 4888886665443222221000 000 0001111123443 357
Q ss_pred ccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 77 ANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+|+|+.+.+. .....+++.+.+.| ++ +|-.|+
T Consensus 77 ~DvVf~a~p~--------------~~s~~~~~~~~~~G-~~-vIDls~ 108 (349)
T PRK08664 77 VDIVFSALPS--------------DVAGEVEEEFAKAG-KP-VFSNAS 108 (349)
T ss_pred CCEEEEeCCh--------------hHHHHHHHHHHHCC-CE-EEECCc
Confidence 9999887643 12245567777788 64 444444
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.2e-05 Score=60.35 Aligned_cols=92 Identities=15% Similarity=0.246 Sum_probs=57.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHh-CCCEEEEe-eCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAK-MGSQVLVP-FRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~-~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|||+|.|++|.+|+.+++.+.+ .++++.+. +|+++... +.....- +.. .....-.+++.++++.+|+||++.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~---~~~--~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELA---GIG--PLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHC---TSS--T-SSBEBS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhh---CcC--CcccccchhHHHhcccCCEEEEcC
Confidence 6899999999999999999998 57886555 55542211 1111000 000 111111256788888899999997
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEE
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v 120 (327)
.+ ..+...++.|.+++ + .+|
T Consensus 76 ~p--------------~~~~~~~~~~~~~g-~-~~V 95 (124)
T PF01113_consen 76 NP--------------DAVYDNLEYALKHG-V-PLV 95 (124)
T ss_dssp -H--------------HHHHHHHHHHHHHT---EEE
T ss_pred Ch--------------HHhHHHHHHHHhCC-C-CEE
Confidence 32 45667888888888 5 444
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.6e-05 Score=69.09 Aligned_cols=94 Identities=16% Similarity=0.128 Sum_probs=61.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++|+|+||||++|+.|++.|.++|| +++++.|..+... .+. +. .......|+.+ . .++++|+||.+
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~-~l~-~~---g~~i~v~d~~~-~----~~~~vDvVf~A 70 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGK-ELS-FK---GKELKVEDLTT-F----DFSGVDIALFS 70 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCC-eee-eC---CceeEEeeCCH-H----HHcCCCEEEEC
Confidence 47899999999999999999999776 5588877654322 121 11 23334445533 2 23689999998
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
++.. .+..++..+.+.| . .+|=.|+..
T Consensus 71 ~g~g--------------~s~~~~~~~~~~G-~-~VIDlS~~~ 97 (334)
T PRK14874 71 AGGS--------------VSKKYAPKAAAAG-A-VVIDNSSAF 97 (334)
T ss_pred CChH--------------HHHHHHHHHHhCC-C-EEEECCchh
Confidence 8642 2345666666677 4 566556643
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=98.08 E-value=2.1e-05 Score=69.90 Aligned_cols=101 Identities=15% Similarity=0.143 Sum_probs=62.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEE-eeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPM-KFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~-~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|++|+|+||||++|+.+++.|.+. ++++.++.++.+. .+.+.... +.+..+ ..++.+.+.. .+.++|+||.|.
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~-g~~l~~~~--~~~~~~~~~~~~~~~~~--~~~~vD~Vf~al 76 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSA-GKPLSDVH--PHLRGLVDLVLEPLDPE--ILAGADVVFLAL 76 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcccc-CcchHHhC--cccccccCceeecCCHH--HhcCCCEEEECC
Confidence 479999999999999999999986 6788887764332 11121110 111111 1123333332 456799999887
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
+. .....++..+.++| +++|=.|+..-.
T Consensus 77 P~--------------~~~~~~v~~a~~aG--~~VID~S~~fR~ 104 (343)
T PRK00436 77 PH--------------GVSMDLAPQLLEAG--VKVIDLSADFRL 104 (343)
T ss_pred Cc--------------HHHHHHHHHHHhCC--CEEEECCcccCC
Confidence 54 22356667777777 578878876544
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=98.06 E-value=4.3e-05 Score=57.18 Aligned_cols=95 Identities=17% Similarity=0.230 Sum_probs=55.7
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccC----CCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMG----DLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
||.|+||||++|+.+++.|+++. .++..+..+.......+.... ...++.+.. .+.+. +.++|+||.|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---~~~~~----~~~~Dvvf~a 73 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED---ADPEE----LSDVDVVFLA 73 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE---TSGHH----HTTESEEEE-
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee---cchhH----hhcCCEEEec
Confidence 68999999999999999999864 565554433332122222111 011122211 23333 3789999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.+. .....+...+.+.| + ++|=.|+..
T Consensus 74 ~~~--------------~~~~~~~~~~~~~g-~-~ViD~s~~~ 100 (121)
T PF01118_consen 74 LPH--------------GASKELAPKLLKAG-I-KVIDLSGDF 100 (121)
T ss_dssp SCH--------------HHHHHHHHHHHHTT-S-EEEESSSTT
T ss_pred Cch--------------hHHHHHHHHHhhCC-c-EEEeCCHHH
Confidence 764 23456777778888 5 566555543
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.01 E-value=2.7e-05 Score=77.66 Aligned_cols=77 Identities=17% Similarity=0.238 Sum_probs=59.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CE-------------EEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHH
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQ-------------VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~-------------V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~ 71 (327)
.+++|+|+|+ |++|+..++.|.+.+ ++ |.+.+++.+......... ++++.++.|+.|.+++.
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~---~~~~~v~lDv~D~e~L~ 643 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI---ENAEAVQLDVSDSESLL 643 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc---CCCceEEeecCCHHHHH
Confidence 3579999998 999999999998753 33 777777655433222211 35778999999999999
Q ss_pred HHhccccEEEEcccc
Q 047628 72 ATMAKANVVINLIGR 86 (327)
Q Consensus 72 ~~~~~~d~vi~~a~~ 86 (327)
++++++|+||.|.+.
T Consensus 644 ~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 644 KYVSQVDVVISLLPA 658 (1042)
T ss_pred HhhcCCCEEEECCCc
Confidence 999999999999875
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00025 Score=63.86 Aligned_cols=174 Identities=9% Similarity=0.065 Sum_probs=101.4
Q ss_pred cCCcEEEEEcC----------------CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh
Q 047628 5 YSGIIATVFGT----------------TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68 (327)
Q Consensus 5 ~~~~~ilI~Ga----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~ 68 (327)
+..++++|||| ||.+|..++++|..+|++|+++.+..+.... ..+ ...|+.+.+
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~~--------~~~--~~~~v~~~~ 252 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLTP--------PGV--KSIKVSTAE 252 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCCC--------CCc--EEEEeccHH
Confidence 56789999998 4789999999999999999999876543211 112 457888887
Q ss_pred HH-HHHh----ccccEEEEccccccccCc----------chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCc
Q 047628 69 TI-KATM----AKANVVINLIGREYETRN----------YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPS 133 (327)
Q Consensus 69 ~~-~~~~----~~~d~vi~~a~~~~~~~~----------~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~ 133 (327)
++ ..++ .++|++|++|+....... ......++..+..+++..++.. -+ .+.++-..-.+ ..
T Consensus 253 ~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~-~~-~~lvgF~aEt~-~~- 328 (390)
T TIGR00521 253 EMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK-KH-QVIVGFKAETN-DD- 328 (390)
T ss_pred HHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC-CC-cEEEEEEcCCC-cH-
Confidence 77 4344 357999999998532110 1123456667778888777654 12 23333322221 11
Q ss_pred hHHHhHHHHHHHHHhhCCCeEEEecCe--eecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 134 RVFSTKAAAEEAVLRELPWATIMRPAA--MIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 134 ~y~~~K~~~E~~~~~~~~~~~i~r~~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
..-.+.+-+++.+.++++.-.-. -||...+ ....+..++...+...+=.++|+.++..+
T Consensus 329 ----l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~~n------------~~~li~~~~~~~~~~~~K~~iA~~i~~~~ 389 (390)
T TIGR00521 329 ----LIKYAKEKLKKKNLDMIVANDVSQRGFGSDEN------------EVYIFSKHGHKELPLMSKLEVAERILDEI 389 (390)
T ss_pred ----HHHHHHHHHHHcCCCEEEEccCCccccCCCCc------------EEEEEECCCeEEeCCCCHHHHHHHHHHHh
Confidence 22334444566677777765421 1332211 11112122223344456677888877654
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=1.7e-05 Score=68.89 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=60.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCC---CCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhccccE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGC---EDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~---~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
++.++++|+|| |-+|++++..|.+.|.+ |++++|+. ++.......+. ....+....+|+.+.+++.+.++.+|+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Di 202 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDI 202 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCE
Confidence 34578999999 79999999999999975 99999986 33222222221 112345667888888888888888999
Q ss_pred EEEccccc
Q 047628 80 VINLIGRE 87 (327)
Q Consensus 80 vi~~a~~~ 87 (327)
|||+.+..
T Consensus 203 lINaTp~G 210 (289)
T PRK12548 203 LVNATLVG 210 (289)
T ss_pred EEEeCCCC
Confidence 99998653
|
|
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.98 E-value=3.5e-05 Score=67.97 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=59.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|++|+|+||||++|+.|++.|.+++| +++.+... ++..+.+.. ... ..++.+.+... ++++|+||.+
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~-~~aG~~l~~----~~~---~l~~~~~~~~~--~~~vD~vFla 73 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASS-ESAGHSVPF----AGK---NLRVREVDSFD--FSQVQLAFFA 73 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECc-ccCCCeecc----CCc---ceEEeeCChHH--hcCCCEEEEc
Confidence 47999999999999999999997765 34444333 222222221 111 12222222221 4789999988
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~ 130 (327)
++. .....+++.+.+.| + ++|=.|+..-.++
T Consensus 74 ~p~--------------~~s~~~v~~~~~~G-~-~VIDlS~~fR~~~ 104 (336)
T PRK05671 74 AGA--------------AVSRSFAEKARAAG-C-SVIDLSGALPSAQ 104 (336)
T ss_pred CCH--------------HHHHHHHHHHHHCC-C-eEEECchhhcCCC
Confidence 753 12345777887888 4 6777777654433
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.98 E-value=4.5e-05 Score=66.46 Aligned_cols=113 Identities=14% Similarity=0.111 Sum_probs=76.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCC-CCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDL-GQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|||.|+|++|.+|++++..|+..+ .++.+++.+ ........+... .......+. ..+++.+.++++|+||-+|
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~--~~~~~y~~~~daDivvita 76 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL--GPEELKKALKGADVVVIPA 76 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec--CCCchHHhcCCCCEEEEeC
Confidence 589999999999999999998887 589999887 211111111100 111111110 1234567789999999999
Q ss_pred ccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 85 GREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 85 ~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|.... .+..+....|......+++..+++++-..++.+|-
T Consensus 77 G~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN 118 (310)
T cd01337 77 GVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN 118 (310)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 98543 34567889999999999999998873224555554
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.90 E-value=7.7e-05 Score=65.48 Aligned_cols=110 Identities=7% Similarity=-0.007 Sum_probs=74.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-------EEEEeeCCCCC--chhhhcccCCC-----CCeeEEeeCCCChhHHHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-------QVLVPFRGCED--DPRHLKLMGDL-----GQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~--~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~ 72 (327)
..||.|+|++|++|++++..|+..|. +++++++.... .......+... .++.+ . ..-.+
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i-~------~~~~~ 75 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVA-T------TDPEE 75 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEE-e------cChHH
Confidence 46899999999999999999988873 79999886522 21111111100 01111 1 12245
Q ss_pred HhccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCC-cceEEEEe
Q 047628 73 TMAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGG-IMRFIQIS 123 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~-v~~~v~~S 123 (327)
.++++|+||.+||.... .+..+....|....+.+.+.++++++ -..++.+|
T Consensus 76 ~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 76 AFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 67899999999998543 34567889999999999999999873 22445554
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.7e-05 Score=67.22 Aligned_cols=101 Identities=13% Similarity=0.131 Sum_probs=60.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEe-eCCCCCchhhhcccCCCCCeeEE-eeCCCChhHHHHHhccccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVP-FRGCEDDPRHLKLMGDLGQIVPM-KFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~~~~~~~~~~~~~v~~~-~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|+|+|+||||++|..+++.|.+. +.++..+ +++.+.. +.+.... +.+... ..++.+. +..++++++|+||.|.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sag-k~~~~~~--~~l~~~~~~~~~~~-~~~~~~~~~DvVf~al 76 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAG-KPVSEVH--PHLRGLVDLNLEPI-DEEEIAEDADVVFLAL 76 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcC-CChHHhC--ccccccCCceeecC-CHHHhhcCCCEEEECC
Confidence 58999999999999999999987 5788854 4433221 1111100 111111 1111111 2233345799999988
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
+. .....++..+.+.| .++|=.|+..-.
T Consensus 77 P~--------------~~s~~~~~~~~~~G--~~VIDlS~~fR~ 104 (346)
T TIGR01850 77 PH--------------GVSAELAPELLAAG--VKVIDLSADFRL 104 (346)
T ss_pred Cc--------------hHHHHHHHHHHhCC--CEEEeCChhhhc
Confidence 54 23456777777777 588888886543
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00011 Score=62.63 Aligned_cols=86 Identities=19% Similarity=0.224 Sum_probs=58.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEee-CCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPF-RGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~-R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+|+|+|+|++|.+|+.+++.+.+. +.++.++. ++++.... . -..++...+++.++++++|+||+++
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~-~-----------~~~~i~~~~dl~~ll~~~DvVid~t 68 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG-Q-----------GALGVAITDDLEAVLADADVLIDFT 68 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc-c-----------CCCCccccCCHHHhccCCCEEEECC
Confidence 379999999999999999988864 68877754 44333211 1 1112223345666677899999998
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEE
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v 120 (327)
.+ .....++..|.++| + ++|
T Consensus 69 ~p--------------~~~~~~~~~al~~G-~-~vv 88 (257)
T PRK00048 69 TP--------------EATLENLEFALEHG-K-PLV 88 (257)
T ss_pred CH--------------HHHHHHHHHHHHcC-C-CEE
Confidence 43 23356788888888 4 566
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0002 Score=60.28 Aligned_cols=97 Identities=14% Similarity=0.060 Sum_probs=74.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~ 83 (327)
|+++|||+|||+- |+.|++.|.+.|++|++.+-....... ...+..+.+-+.+.+.+.+.++ ++++||+.
T Consensus 1 ~~~~IlvlgGT~e-gr~la~~L~~~g~~v~~Svat~~g~~~-------~~~~~v~~G~l~~~~~l~~~l~~~~i~~VIDA 72 (248)
T PRK08057 1 MMPRILLLGGTSE-ARALARALAAAGVDIVLSLAGRTGGPA-------DLPGPVRVGGFGGAEGLAAYLREEGIDLVIDA 72 (248)
T ss_pred CCceEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCCCcc-------cCCceEEECCCCCHHHHHHHHHHCCCCEEEEC
Confidence 3578999999988 999999999999988776655533211 1246777888888999999986 58999998
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
..+.. ...+.++.++|++.+ +..+=|.
T Consensus 73 THPfA-----------~~is~~a~~ac~~~~-ipyiR~e 99 (248)
T PRK08057 73 THPYA-----------AQISANAAAACRALG-IPYLRLE 99 (248)
T ss_pred CCccH-----------HHHHHHHHHHHHHhC-CcEEEEe
Confidence 75532 356789999999998 7655444
|
|
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.0002 Score=62.83 Aligned_cols=109 Identities=15% Similarity=0.099 Sum_probs=75.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCC----CCeeEEeeCCCChhHHHHHhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDL----GQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
.+||.|+|+ |.+|+.++..|+..|. ++.+++++.+........+.+. .++.. ..+ + . +.++++|+|
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~~--~---~-~~~~~adiv 77 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YAG--D---Y-SDCKDADLV 77 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-EeC--C---H-HHhCCCCEE
Confidence 479999998 9999999999998885 8999999776543222211110 12222 221 2 2 347899999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|.++|.... .+..+....|....+.+++.+++.++-..++.+|
T Consensus 78 Iitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 78 VITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 999998543 3446788889999999999998887222444444
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00014 Score=64.34 Aligned_cols=107 Identities=16% Similarity=0.236 Sum_probs=73.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc------------------------hhhhcccCCCCCeeE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD------------------------PRHLKLMGDLGQIVP 59 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~------------------------~~~~~~~~~~~~v~~ 59 (327)
++..+|+|+|+ |.+|++++..|...|. ++++++++.-.. ...+......-+++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 34678999999 8999999999999997 899988863110 011112222224555
Q ss_pred EeeCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 60 MKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 60 ~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
+..+++ ++.+.++++++|+||.+.. |......+.++|.+.+ + .+|+.|..+.+
T Consensus 101 ~~~~~~-~~~~~~~~~~~DlVid~~D-------------n~~~r~~ln~~~~~~~-i-P~i~~~~~g~~ 153 (339)
T PRK07688 101 IVQDVT-AEELEELVTGVDLIIDATD-------------NFETRFIVNDAAQKYG-I-PWIYGACVGSY 153 (339)
T ss_pred EeccCC-HHHHHHHHcCCCEEEEcCC-------------CHHHHHHHHHHHHHhC-C-CEEEEeeeeee
Confidence 666664 4667778899999999864 2233446778888888 4 67887776544
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00017 Score=63.45 Aligned_cols=111 Identities=11% Similarity=0.047 Sum_probs=73.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-------EEEEeeCCCCC--chhhhcccCCC-----CCeeEEeeCCCChhHHHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-------QVLVPFRGCED--DPRHLKLMGDL-----GQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~--~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~ 72 (327)
++||.|+|++|.+|++++..|+..|. ++.++++++.. .......+... .++.+ + ....+
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-----~--~~~y~ 76 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-----T--DDPNV 76 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-----e--cChHH
Confidence 56999999999999999999887652 78899885432 11111111000 11211 1 12245
Q ss_pred HhccccEEEEcccccc--ccCcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEec
Q 047628 73 TMAKANVVINLIGREY--ETRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISC 124 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss 124 (327)
.++++|+||-+||... ..+..+....|....+.+.+.+.++. +-..++.+|.
T Consensus 77 ~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 77 AFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 6789999999999753 23456788999999999999998854 2335565663
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00016 Score=64.09 Aligned_cols=106 Identities=17% Similarity=0.276 Sum_probs=71.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc------------------------hhhhcccCCCCCeeE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD------------------------PRHLKLMGDLGQIVP 59 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~------------------------~~~~~~~~~~~~v~~ 59 (327)
++.++|+|+|+ |-+|+++++.|...|. ++++++++.-.. ...+.......+++.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~ 100 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVP 100 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEE
Confidence 34678999999 6699999999999997 788888864110 011222222234566
Q ss_pred EeeCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 60 MKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 60 ~~~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+..|++ ++.+.++++++|+||.+... ...-..+-++|.+.+ + .+|+.+..+.
T Consensus 101 ~~~~~~-~~~~~~~~~~~DlVid~~D~-------------~~~r~~in~~~~~~~-i-p~i~~~~~g~ 152 (338)
T PRK12475 101 VVTDVT-VEELEELVKEVDLIIDATDN-------------FDTRLLINDLSQKYN-I-PWIYGGCVGS 152 (338)
T ss_pred EeccCC-HHHHHHHhcCCCEEEEcCCC-------------HHHHHHHHHHHHHcC-C-CEEEEEeccc
Confidence 666764 46778889999999998732 222234667888887 5 5777776554
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.84 E-value=9.2e-05 Score=68.80 Aligned_cols=73 Identities=16% Similarity=0.186 Sum_probs=59.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
|+|+|+|+ |.+|+++++.|.+.|++|++++++++.... +... .+++++.+|.++++.+.++ ++++|.||-+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~-~~~~---~~~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRR-LQDR---LDVRTVVGNGSSPDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HHhh---cCEEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence 58999998 999999999999999999999998765332 2210 2478899999999999888 788999987764
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0001 Score=64.74 Aligned_cols=115 Identities=13% Similarity=0.063 Sum_probs=70.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
||||.|+|+ |.+|+.++..++..|. +|++++++++.....................+....++ +.++++|+||.+++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~ 79 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG 79 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence 379999999 9999999999998875 99999997765432211110000000000011111123 34789999999988
Q ss_pred ccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 86 REYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 86 ~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
.+... ...+....|......+++.+.+..+-..+|..|
T Consensus 80 ~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t 119 (307)
T PRK06223 80 VPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVT 119 (307)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 65432 223455678888888888888776222355554
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00023 Score=62.43 Aligned_cols=108 Identities=16% Similarity=0.132 Sum_probs=74.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCC-----CCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
++|.|+|+ |.+|+.++..|+..| ++|.+++|+.+........+.+ ....... . .+. +.+.++|+|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~----~~l~~aDIV 72 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDY----SDCKDADIV 72 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCH----HHhCCCCEE
Confidence 47999997 999999999999998 6899999987764322221110 0112221 1 122 236799999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|.++|.... .+..+....|....+.+.+.+++.++-..++.+|
T Consensus 73 Iitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvs 117 (306)
T cd05291 73 VITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVAS 117 (306)
T ss_pred EEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 999997543 2445788889999999999999987322455555
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.79 E-value=0.00017 Score=62.32 Aligned_cols=110 Identities=15% Similarity=0.126 Sum_probs=74.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCC----CCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDL----GQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+||.|+|+ |++|+.++-.|+.++ .+++++++..+........+... ..-..+.+| .+ .+.++++|+|+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~----~~-y~~~~~aDiVv 74 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD----GD-YEDLKGADIVV 74 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC----CC-hhhhcCCCEEE
Confidence 58999999 999999999997765 48999999854432211111100 000112222 12 45678999999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
-+||.+.. .+..+....|......+.+...+.+ .+-++.+-|
T Consensus 75 itAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvt 118 (313)
T COG0039 75 ITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVT 118 (313)
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhC-CCeEEEEec
Confidence 99987643 3457889999999999999999988 444444443
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0003 Score=61.42 Aligned_cols=110 Identities=13% Similarity=0.108 Sum_probs=73.5
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCC-CCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDL-GQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
||.|+|++|.+|++++..|+..+. ++.++++++ . ......+... ....+.... +.+++.+.++++|+||-++|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a-~g~a~DL~~~~~~~~i~~~~--~~~~~~~~~~daDivvitaG 76 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-A-AGVAADLSHIPTAASVKGFS--GEEGLENALKGADVVVIPAG 76 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-C-cEEEchhhcCCcCceEEEec--CCCchHHHcCCCCEEEEeCC
Confidence 589999999999999999988874 799998876 2 1111111110 111111101 11235668899999999999
Q ss_pred cccc--cCcchhHhhhhHHHHHHHHHHHHcCCcce-EEEEe
Q 047628 86 REYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMR-FIQIS 123 (327)
Q Consensus 86 ~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~-~v~~S 123 (327)
.... .+..+....|....+.+.+...+.+ .+. ++.+|
T Consensus 77 ~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~-p~~iiivvs 116 (312)
T TIGR01772 77 VPRKPGMTRDDLFNVNAGIVKDLVAAVAESC-PKAMILVIT 116 (312)
T ss_pred CCCCCCccHHHHHHHhHHHHHHHHHHHHHhC-CCeEEEEec
Confidence 7533 3456788889999999999998887 343 44444
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.77 E-value=3.7e-05 Score=58.74 Aligned_cols=77 Identities=22% Similarity=0.260 Sum_probs=54.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++++|+|+ |-.|+.++..|.+.|.+ |+++.|+.++........+ ...+.++. .+++.+.+.++|+||++
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~-~~~~~~~~-----~~~~~~~~~~~DivI~a 82 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG-GVNIEAIP-----LEDLEEALQEADIVINA 82 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT-GCSEEEEE-----GGGHCHHHHTESEEEE-
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC-ccccceee-----HHHHHHHHhhCCeEEEe
Confidence 45789999999 77999999999999965 9999999776544333331 11233332 34555778889999999
Q ss_pred ccccc
Q 047628 84 IGREY 88 (327)
Q Consensus 84 a~~~~ 88 (327)
.+...
T Consensus 83 T~~~~ 87 (135)
T PF01488_consen 83 TPSGM 87 (135)
T ss_dssp SSTTS
T ss_pred cCCCC
Confidence 87643
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00012 Score=58.78 Aligned_cols=73 Identities=14% Similarity=0.229 Sum_probs=45.9
Q ss_pred CCcEEEEEcC----------------CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhH
Q 047628 6 SGIIATVFGT----------------TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69 (327)
Q Consensus 6 ~~~~ilI~Ga----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~ 69 (327)
..++||||+| ||..|..|++.+..+|++|+++....+-..+ ..++.+... +.++
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~p--------~~~~~i~v~--sa~e 71 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPPP--------PGVKVIRVE--SAEE 71 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEEE-S--SHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccccc--------ccceEEEec--chhh
Confidence 3567888754 8999999999999999999999887432111 246666544 4444
Q ss_pred ----HHHHhccccEEEEcccccc
Q 047628 70 ----IKATMAKANVVINLIGREY 88 (327)
Q Consensus 70 ----~~~~~~~~d~vi~~a~~~~ 88 (327)
+.+.+.++|++||+|++..
T Consensus 72 m~~~~~~~~~~~Di~I~aAAVsD 94 (185)
T PF04127_consen 72 MLEAVKELLPSADIIIMAAAVSD 94 (185)
T ss_dssp HHHHHHHHGGGGSEEEE-SB--S
T ss_pred hhhhhccccCcceeEEEecchhh
Confidence 4445567899999999853
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.74 E-value=6.1e-05 Score=62.88 Aligned_cols=63 Identities=17% Similarity=0.232 Sum_probs=45.0
Q ss_pred cCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh-------ccccEEEEcccc
Q 047628 14 GTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM-------AKANVVINLIGR 86 (327)
Q Consensus 14 GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-------~~~d~vi~~a~~ 86 (327)
.+||.||++++++|+++|++|+++.|.... .. .....+|+.+.+++.+.+ .++|++||+||.
T Consensus 22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-----~~------~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv 90 (227)
T TIGR02114 22 HSTGHLGKIITETFLSAGHEVTLVTTKRAL-----KP------EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAV 90 (227)
T ss_pred CcccHHHHHHHHHHHHCCCEEEEEcChhhc-----cc------ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEe
Confidence 458999999999999999999998763211 00 011346777766665443 357999999997
Q ss_pred c
Q 047628 87 E 87 (327)
Q Consensus 87 ~ 87 (327)
.
T Consensus 91 ~ 91 (227)
T TIGR02114 91 S 91 (227)
T ss_pred c
Confidence 4
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00014 Score=62.40 Aligned_cols=113 Identities=15% Similarity=0.056 Sum_probs=73.1
Q ss_pred EEEEcCCCccHHHHHHHHHhCC----CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMG----SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|.|+||+|.+|..++..|+..| .++.+++++.+................ ....+.-.+++.++++++|+||.+++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~-~~~~i~~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPL-ADIKVSITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhc-cCcEEEECCchHHHhCCCCEEEECCC
Confidence 5799999999999999999888 799999998765432222111000000 01111112235667899999999998
Q ss_pred ccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 86 REYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 86 ~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
..... ........|....+.+++.+++.++-..++..|
T Consensus 80 ~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 80 VGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred CCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 75432 234566778888999999998887222344443
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00044 Score=51.22 Aligned_cols=93 Identities=25% Similarity=0.274 Sum_probs=64.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcccccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIGREY 88 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~~~ 88 (327)
|+|.|. |.+|..+++.|.+.+.+|+++.++++.... +... .+.++.+|.++++.|.++ +++++.|+-+....
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~-~~~~----~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d- 73 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEE-LREE----GVEVIYGDATDPEVLERAGIEKADAVVILTDDD- 73 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHH-HHHT----TSEEEES-TTSHHHHHHTTGGCESEEEEESSSH-
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHH-HHhc----ccccccccchhhhHHhhcCccccCEEEEccCCH-
Confidence 578888 789999999999977799999998765322 2222 488999999999999875 56789888776421
Q ss_pred ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEE
Q 047628 89 ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121 (327)
Q Consensus 89 ~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~ 121 (327)
.....++..+++.++..+++.
T Consensus 74 ------------~~n~~~~~~~r~~~~~~~ii~ 94 (116)
T PF02254_consen 74 ------------EENLLIALLARELNPDIRIIA 94 (116)
T ss_dssp ------------HHHHHHHHHHHHHTTTSEEEE
T ss_pred ------------HHHHHHHHHHHHHCCCCeEEE
Confidence 223445666676442335443
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00012 Score=67.95 Aligned_cols=77 Identities=19% Similarity=0.183 Sum_probs=55.0
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
.++.++++|+|+++ +|..+++.|++.|++|++.++...... .....+.. .+++++.+|..+ +...++|+||+
T Consensus 2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~-~~~~~~~~~~~~-----~~~~~~d~vv~ 74 (450)
T PRK14106 2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE-LGIELVLGEYPE-----EFLEGVDLVVV 74 (450)
T ss_pred CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh-cCCEEEeCCcch-----hHhhcCCEEEE
Confidence 35568999999977 999999999999999999998753321 11111111 136677777655 23467999999
Q ss_pred ccccc
Q 047628 83 LIGRE 87 (327)
Q Consensus 83 ~a~~~ 87 (327)
+++..
T Consensus 75 ~~g~~ 79 (450)
T PRK14106 75 SPGVP 79 (450)
T ss_pred CCCCC
Confidence 98864
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.00039 Score=52.30 Aligned_cols=91 Identities=15% Similarity=0.068 Sum_probs=68.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
.++++++|. | -|.+++..|.+.|++|++++.++..... .+. ..+.++.+|+.+++ -+..+++|.|+.+=.+
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~-a~~----~~~~~v~dDlf~p~--~~~y~~a~liysirpp 87 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEK-AKK----LGLNAFVDDLFNPN--LEIYKNAKLIYSIRPP 87 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHH-HHH----hCCeEEECcCCCCC--HHHHhcCCEEEEeCCC
Confidence 478999999 5 6999999999999999999998775322 222 24789999998876 3455789999866432
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEE
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v 120 (327)
.+....+++.+++.+ ..-+|
T Consensus 88 -------------~el~~~~~~la~~~~-~~~~i 107 (134)
T PRK04148 88 -------------RDLQPFILELAKKIN-VPLII 107 (134)
T ss_pred -------------HHHHHHHHHHHHHcC-CCEEE
Confidence 255678999999988 65444
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00022 Score=62.78 Aligned_cols=115 Identities=14% Similarity=0.052 Sum_probs=74.5
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhccc---CCC--CCeeEEeeCCCChhHHHHHh
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLM---GDL--GQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~---~~~--~~v~~~~~Dl~~~~~~~~~~ 74 (327)
|+|.. .+||.|+|+ |.+|+.++..++..|. +|++++++++......... ... ...++... .| + +.+
T Consensus 1 ~~~~~-~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l 72 (321)
T PTZ00082 1 MTMIK-RRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIGT--NN---Y-EDI 72 (321)
T ss_pred CCCCC-CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEEC--CC---H-HHh
Confidence 45543 479999996 9999999999988885 8999999877532111100 000 11222210 12 2 357
Q ss_pred ccccEEEEcccccccc-------CcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEec
Q 047628 75 AKANVVINLIGREYET-------RNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISC 124 (327)
Q Consensus 75 ~~~d~vi~~a~~~~~~-------~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss 124 (327)
+++|+||.+++..... +..+....|....+.+++.+.+.+ .+ .++..|.
T Consensus 73 ~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sN 129 (321)
T PTZ00082 73 AGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITN 129 (321)
T ss_pred CCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecC
Confidence 8999999999875321 223466778888888999888887 34 5666553
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00053 Score=60.84 Aligned_cols=97 Identities=11% Similarity=0.125 Sum_probs=58.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
.+.++|+|+||||++|..|++.|.+++| ++..+....+. .+.+... .......++ ++ +.++++|+||
T Consensus 5 ~~~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsa-Gk~~~~~----~~~~~v~~~-~~----~~~~~~D~vf 74 (344)
T PLN02383 5 ENGPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSA-GKKVTFE----GRDYTVEEL-TE----DSFDGVDIAL 74 (344)
T ss_pred CCCCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCC-CCeeeec----CceeEEEeC-CH----HHHcCCCEEE
Confidence 4468999999999999999999998776 44444333221 1111111 122222233 22 2346899999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
.+++.. ....++..+.+.| .++|=.|+..-
T Consensus 75 ~a~p~~--------------~s~~~~~~~~~~g--~~VIDlS~~fR 104 (344)
T PLN02383 75 FSAGGS--------------ISKKFGPIAVDKG--AVVVDNSSAFR 104 (344)
T ss_pred ECCCcH--------------HHHHHHHHHHhCC--CEEEECCchhh
Confidence 888642 2345555566667 36777776543
|
|
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0003 Score=61.92 Aligned_cols=112 Identities=13% Similarity=0.064 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCC---CCCe-eEEeeCCCChhHHHHHhccccEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGD---LGQI-VPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~---~~~v-~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
..+||.|+|| |.+|+.++..|+..| .++++++++.+........... .... ..+.+ ..++. .++++|+|
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~----~~d~~-~l~~ADiV 77 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG----TNNYE-DIKDSDVV 77 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe----CCCHH-HhCCCCEE
Confidence 4579999998 999999999988888 6899999887653211110000 0000 11111 12344 67899999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcce-EEEEec
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMR-FIQISC 124 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~-~v~~Ss 124 (327)
|.+++.... ....+....|......+.+.+.+.+ .+. ++.+|.
T Consensus 78 Vitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~-p~a~vivvsN 123 (319)
T PTZ00117 78 VITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYC-PNAFVICVTN 123 (319)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecC
Confidence 999976432 2345677778888888999888887 344 566554
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00012 Score=64.30 Aligned_cols=35 Identities=20% Similarity=0.234 Sum_probs=32.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
|+|.|+|+ |.+|..++..|+++|++|++.+|+++.
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~~~ 37 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADPAA 37 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCHHH
Confidence 58999995 999999999999999999999998754
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00075 Score=58.97 Aligned_cols=107 Identities=15% Similarity=0.127 Sum_probs=74.1
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCC---C---CCeeEEeeCCCChhHHHHHhccccEE
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD---L---GQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~---~---~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
||.|+|+ |.+|+.++..|+.++ .++.+++.+.+........+.. . .+++...+ + .+.++++|+|
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~----y~~~~~aDiv 72 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D----YDDCADADII 72 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C----HHHhCCCCEE
Confidence 5889999 999999999999887 4799999876654322221111 0 12333322 2 3567899999
Q ss_pred EEccccccc--cC--cchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 81 INLIGREYE--TR--NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 81 i~~a~~~~~--~~--~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|-+||.... .. ..+....|....+.+++.+.+++ ..-++.+-|
T Consensus 73 vitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvs 119 (307)
T cd05290 73 VITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILIT 119 (307)
T ss_pred EECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEec
Confidence 999998543 22 36788999999999999999988 444444433
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00029 Score=62.52 Aligned_cols=91 Identities=12% Similarity=0.132 Sum_probs=57.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEE---EeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVL---VPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~---~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+|+|+||||++|+.|++.|.+++|.+. .+.+..+.. ..+.. ........|+. . ..++++|+||.+++
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g-~~~~~----~~~~~~~~~~~-~----~~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAG-RKVTF----KGKELEVNEAK-I----ESFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCC-Ceeee----CCeeEEEEeCC-h----HHhcCCCEEEECCC
Confidence 589999999999999999999877643 444554331 22221 12344555553 2 23478999999987
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
.. .+..++..+.+.| . ++|=.|+.
T Consensus 71 ~~--------------~s~~~a~~~~~~G-~-~VID~ss~ 94 (339)
T TIGR01296 71 GS--------------VSKEFAPKAAKCG-A-IVIDNTSA 94 (339)
T ss_pred HH--------------HHHHHHHHHHHCC-C-EEEECCHH
Confidence 52 2345566666677 5 45555553
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00097 Score=50.90 Aligned_cols=104 Identities=18% Similarity=0.258 Sum_probs=68.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCch----------------------hhhcccCCCCCeeEEeeC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDP----------------------RHLKLMGDLGQIVPMKFN 63 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~----------------------~~~~~~~~~~~v~~~~~D 63 (327)
.++|+|.|+ |-+|+.+++.|...|. ++++++.+.-... ..+.+.....+++.+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 468999999 8899999999999996 6888766532110 001111212245555556
Q ss_pred CCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 64 PRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 64 l~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+ +.+.+.+.++++|+||.|... ......+.+.|++.+ + .+|+.++.+.
T Consensus 81 ~-~~~~~~~~~~~~d~vi~~~d~-------------~~~~~~l~~~~~~~~-~-p~i~~~~~g~ 128 (135)
T PF00899_consen 81 I-DEENIEELLKDYDIVIDCVDS-------------LAARLLLNEICREYG-I-PFIDAGVNGF 128 (135)
T ss_dssp C-SHHHHHHHHHTSSEEEEESSS-------------HHHHHHHHHHHHHTT---EEEEEEEETT
T ss_pred c-ccccccccccCCCEEEEecCC-------------HHHHHHHHHHHHHcC-C-CEEEEEeecC
Confidence 6 556778888899999988643 233456778899998 4 7887776543
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00035 Score=62.01 Aligned_cols=109 Identities=12% Similarity=0.081 Sum_probs=73.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCC---C-CCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD---L-GQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~---~-~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+||.|+|+ |.+|+.++..|+..+ .++.+++.+.+........+.. . +.. -+.++ .+ . +.++++|+||
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~d---y-~~~~daDiVV 110 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TD---Y-AVTAGSDLCI 110 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CC---H-HHhCCCCEEE
Confidence 69999997 999999999998877 4799999877654322211110 0 122 22221 12 2 2378999999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
-+||.... .+..+....|....+.+++.++++++-..++.+|
T Consensus 111 itAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 111 VTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99997543 2345788889999999999999887322455555
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0003 Score=61.51 Aligned_cols=115 Identities=15% Similarity=0.109 Sum_probs=71.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|||.|+|+ |.+|..++..|+..|+ +|+++++..+...................+.+.-..++.+ ++++|+||-++|.
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-~~~aDiVIitag~ 79 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-TANSDIVVITAGL 79 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-hCCCCEEEEcCCC
Confidence 68999998 9999999999999886 8999998655322111100000000000011111112333 6789999999987
Q ss_pred cccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 87 EYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 87 ~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+... +..+....|......+++.+.+.++-..+|.+|.
T Consensus 80 p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 80 PRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5432 3346777899999999998888762224555553
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00031 Score=61.53 Aligned_cols=110 Identities=14% Similarity=0.033 Sum_probs=73.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCC---C-CCeeEEeeCCCChhHHHHHhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD---L-GQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~---~-~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
.+||.|+|+ |.+|+.++..|+..| .++++++.+.+........+.. . ....+..+ .+. . .++++|+|
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy---~-~~~~adiv 75 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDY---S-VTANSKVV 75 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCH---H-HhCCCCEE
Confidence 469999997 999999999998876 5799999877543222211110 0 11122211 122 2 37899999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|-++|.... .+..+....|....+.+.+.+++.++-..++.+|
T Consensus 76 vitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 76 IVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 999997543 2345678889999999999999887322445555
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00065 Score=61.89 Aligned_cols=151 Identities=12% Similarity=0.072 Sum_probs=93.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-------CC--EEEEeeCCCCCchhhhcccCCC-----CCeeEEeeCCCChhHHHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-------GS--QVLVPFRGCEDDPRHLKLMGDL-----GQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-------g~--~V~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~ 72 (327)
.-||.|+|++|.+|.+++..|+.. +. ++..++++.+........+.+. .++.+ .. .+ .+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i-~~--~~----ye 172 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSI-GI--DP----YE 172 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEE-ec--CC----HH
Confidence 468999999999999999999887 54 7888888877654332211110 12211 11 12 34
Q ss_pred HhccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHH-cCCcceEEEEeccCC---------CCCCC------ch
Q 047628 73 TMAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKE-HGGIMRFIQISCLGA---------SSSSP------SR 134 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~-~~~v~~~v~~Ss~~v---------~~~~~------~~ 134 (327)
.++++|+||-++|.... .+..+..+.|....+.+.+.+.+ +++-..+|.+|...- .+..| ..
T Consensus 173 ~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg~~~~rViGtgT 252 (444)
T PLN00112 173 VFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALT 252 (444)
T ss_pred HhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcCCCCcceEEeec
Confidence 67899999999998543 34467889999999999999999 563234555554210 11111 11
Q ss_pred HHHhHHHHHHHHHhhCCCeEEEecCeeecC
Q 047628 135 VFSTKAAAEEAVLRELPWATIMRPAAMIGT 164 (327)
Q Consensus 135 y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~ 164 (327)
...+-+..-.+.+..+++..-+.-.+|+|.
T Consensus 253 ~LDsaR~r~~LA~~l~V~~~~V~~~~V~Ge 282 (444)
T PLN00112 253 RLDENRAKCQLALKAGVFYDKVSNVTIWGN 282 (444)
T ss_pred cHHHHHHHHHHHHHhCcCHHHcccceEEec
Confidence 112222222333445677777766677776
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00079 Score=62.59 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=70.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLI 84 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a 84 (327)
.+++|+|+|+ |.+|+.+++.|.+.|++|++++++++... .+.... .++..+.+|.++++.+.++ ++++|+||-+.
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~-~~~~~~--~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAE-ELAEEL--PNTLVLHGDGTDQELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHHHHC--CCCeEEECCCCCHHHHHhcCCccCCEEEECC
Confidence 3588999999 99999999999999999999998876532 222211 2477899999999988654 46789998665
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+.. ..|.. +...+++.+ +++++....
T Consensus 306 ~~~---------~~n~~----~~~~~~~~~-~~~ii~~~~ 331 (453)
T PRK09496 306 NDD---------EANIL----SSLLAKRLG-AKKVIALVN 331 (453)
T ss_pred CCc---------HHHHH----HHHHHHHhC-CCeEEEEEC
Confidence 421 22332 233456666 666665443
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0014 Score=53.80 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=68.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc---h-------------------hhhcccCCCCCeeEEe
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD---P-------------------RHLKLMGDLGQIVPMK 61 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~-------------------~~~~~~~~~~~v~~~~ 61 (327)
+...+|+|+|+ |-+|+++++.|...|. ++++++++.-.. . ..+.......+++.+.
T Consensus 19 l~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 34578999998 7889999999999996 788888763110 0 0111222112333444
Q ss_pred eCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
.++ +++.+.+.++++|+||.+... ...-..+.++|++.+ + .+|+.++.+.
T Consensus 98 ~~i-~~~~~~~~~~~~D~Vi~~~d~-------------~~~r~~l~~~~~~~~-i-p~i~~~~~g~ 147 (202)
T TIGR02356 98 ERV-TAENLELLINNVDLVLDCTDN-------------FATRYLINDACVALG-T-PLISAAVVGF 147 (202)
T ss_pred hcC-CHHHHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcC-C-CEEEEEeccC
Confidence 444 345677788999999988642 223345778888887 4 6777776543
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0023 Score=56.20 Aligned_cols=108 Identities=14% Similarity=0.118 Sum_probs=72.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCC----CCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD----LGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
|+|.|+|+ |.+|..++..|+..| .+|.+++++.+........+.. ........+ + . +.++++|+||
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~aDiVi 72 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGADVVV 72 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCCCEEE
Confidence 57999999 999999999999998 6899999987653321111110 011222111 2 2 3478999999
Q ss_pred Ecccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 82 NLIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 82 ~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
.+++..... +..+....|....+.+++.+++.+ .+-++.+-+
T Consensus 73 ita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~-~~giiiv~t 116 (308)
T cd05292 73 ITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVT 116 (308)
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEec
Confidence 999875432 334667778888889999888887 343443333
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0021 Score=52.44 Aligned_cols=107 Identities=15% Similarity=0.204 Sum_probs=68.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc---h---------------------hhhcccCCCCCeeEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD---P---------------------RHLKLMGDLGQIVPM 60 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~---------------------~~~~~~~~~~~v~~~ 60 (327)
+..+|+|+|++| +|+++++.|...|. ++++++.+.-.. . ..+++.....+++.+
T Consensus 18 ~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~~~ 96 (198)
T cd01485 18 RSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLSIV 96 (198)
T ss_pred hhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 457899999977 99999999999995 588877653210 0 011222222244555
Q ss_pred eeCCCC-hhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 61 KFNPRD-DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 61 ~~Dl~~-~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
..++.+ .+...+.++++|+||.+... ......+-++|++.+ + .+|+.++.+.+
T Consensus 97 ~~~~~~~~~~~~~~~~~~dvVi~~~d~-------------~~~~~~ln~~c~~~~-i-p~i~~~~~G~~ 150 (198)
T cd01485 97 EEDSLSNDSNIEEYLQKFTLVIATEEN-------------YERTAKVNDVCRKHH-I-PFISCATYGLI 150 (198)
T ss_pred ecccccchhhHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcC-C-CEEEEEeecCE
Confidence 555542 44556677889999977432 233355778888887 5 67878776554
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0012 Score=55.71 Aligned_cols=101 Identities=19% Similarity=0.131 Sum_probs=71.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~ 85 (327)
|+|||+|||+- |+.|+..|.+.|+ |.+-+-..-. ...... ..+.+..+.+-+.+.+.+.+.++ +++.||+...
T Consensus 1 m~ILvlgGTtE-~r~la~~L~~~g~-v~~sv~t~~g-~~~~~~--~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATH 75 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLAEAGY-VIVSVATSYG-GELLKP--ELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATH 75 (249)
T ss_pred CEEEEEechHH-HHHHHHHHHhcCC-EEEEEEhhhh-Hhhhcc--ccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCC
Confidence 78999999988 9999999999998 4443222211 111110 01246777888889999999885 5899999876
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
+.. ...+.|+.++|++.| +..+=|-=..
T Consensus 76 PfA-----------~~is~na~~a~~~~~-ipylR~eRp~ 103 (249)
T PF02571_consen 76 PFA-----------AEISQNAIEACRELG-IPYLRFERPS 103 (249)
T ss_pred chH-----------HHHHHHHHHHHhhcC-cceEEEEcCC
Confidence 532 256789999999999 8755554443
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00089 Score=55.86 Aligned_cols=101 Identities=19% Similarity=0.181 Sum_probs=61.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEE-eeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLV-PFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~-~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
++|+|+|.|++|..|+.+++.+.+.+ .++.+ +.|.++... ....+.. .+..+..-+.+ ++.....++|++|+
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~---g~~~~gv~v~~--~~~~~~~~~DV~ID 75 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELA---GLGLLGVPVTD--DLLLVKADADVLID 75 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhc---cccccCceeec--chhhcccCCCEEEE
Confidence 35899999999999999999999875 56444 556544321 0000000 01111111111 14445567999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
+..+ .++...++.|.+++ + ++| +.|++..
T Consensus 76 FT~P--------------~~~~~~l~~~~~~~-~-~lV-IGTTGf~ 104 (266)
T COG0289 76 FTTP--------------EATLENLEFALEHG-K-PLV-IGTTGFT 104 (266)
T ss_pred CCCc--------------hhhHHHHHHHHHcC-C-CeE-EECCCCC
Confidence 9754 46778999999998 5 344 5555544
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.0017 Score=62.42 Aligned_cols=89 Identities=12% Similarity=0.078 Sum_probs=68.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
.++|+|.|. |.+|+.+++.|.++|+++++++++++... ..+.. +...+.+|.++++.++++ ++++|++|-+..
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~-~~~~~----g~~v~~GDat~~~~L~~agi~~A~~vv~~~~ 473 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVN-LMRKY----GYKVYYGDATQLELLRAAGAEKAEAIVITCN 473 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHH-HHHhC----CCeEEEeeCCCHHHHHhcCCccCCEEEEEeC
Confidence 368999997 99999999999999999999999876533 23332 478899999999999875 577899887754
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
.. +....++..+++..
T Consensus 474 d~-------------~~n~~i~~~~r~~~ 489 (601)
T PRK03659 474 EP-------------EDTMKIVELCQQHF 489 (601)
T ss_pred CH-------------HHHHHHHHHHHHHC
Confidence 21 22345677777765
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0011 Score=58.97 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=28.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGC 41 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~ 41 (327)
++|+|+|+||++|++|++.|.+++ .++..+.++.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 589999999999999999988876 5888875443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00095 Score=58.12 Aligned_cols=83 Identities=16% Similarity=0.111 Sum_probs=53.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|+++|.|+||||++|..|++.|.++. .++..+..+... |+.+ ..+.++++|+||.+.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~-------------------~~~~---~~~~~~~~DvvFlal 58 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK-------------------DAAA---RRELLNAADVAILCL 58 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC-------------------cccC---chhhhcCCCEEEECC
Confidence 35799999999999999999998886 366666543222 1111 123456789999877
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+. .....++..+.+.| . ++|=.|+..
T Consensus 59 p~--------------~~s~~~~~~~~~~g-~-~VIDlSadf 84 (313)
T PRK11863 59 PD--------------DAAREAVALIDNPA-T-RVIDASTAH 84 (313)
T ss_pred CH--------------HHHHHHHHHHHhCC-C-EEEECChhh
Confidence 43 12344555565666 3 677677643
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0012 Score=57.40 Aligned_cols=100 Identities=15% Similarity=0.199 Sum_probs=58.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCee-E--EeeCCCChhHHHHHhccccEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIV-P--MKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~-~--~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+|+||.|.||||+.|..|++.|..+. .++...+.+.... +.+.... +++. . .....-+++.+ ..++||+||
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g-~~~~~~~--p~l~g~~~l~~~~~~~~~~--~~~~~DvvF 75 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAG-KPVSDVH--PNLRGLVDLPFQTIDPEKI--ELDECDVVF 75 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcC-CchHHhC--cccccccccccccCChhhh--hcccCCEEE
Confidence 36899999999999999999999885 5766665443221 1111110 1111 0 11111133333 356699999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.+.... ....++......| + ++|=+|+..
T Consensus 76 lalPhg--------------~s~~~v~~l~~~g-~-~VIDLSadf 104 (349)
T COG0002 76 LALPHG--------------VSAELVPELLEAG-C-KVIDLSADF 104 (349)
T ss_pred EecCch--------------hHHHHHHHHHhCC-C-eEEECCccc
Confidence 887531 2245666666666 4 577788743
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.002 Score=53.95 Aligned_cols=105 Identities=16% Similarity=0.130 Sum_probs=66.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc----------------------hhhhcccCCCCCeeEEe
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD----------------------PRHLKLMGDLGQIVPMK 61 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~----------------------~~~~~~~~~~~~v~~~~ 61 (327)
+++.+|+|+|+ |-+|+++++.|...|. ++++++.+.-.. ...+.......+++.+.
T Consensus 19 L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 34679999998 8889999999999995 677765542110 00111112112345555
Q ss_pred eCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.++ +.+.+.+.++++|+||.|.... ..-..+-++|.+.+ + .+|+.+..+
T Consensus 98 ~~i-~~~~~~~~~~~~DvVi~~~d~~-------------~~r~~l~~~~~~~~-i-p~i~~g~~g 146 (228)
T cd00757 98 ERL-DAENAEELIAGYDLVLDCTDNF-------------ATRYLINDACVKLG-K-PLVSGAVLG 146 (228)
T ss_pred cee-CHHHHHHHHhCCCEEEEcCCCH-------------HHHHHHHHHHHHcC-C-CEEEEEecc
Confidence 555 3466777888999999987531 22345777888887 4 677766543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00074 Score=59.23 Aligned_cols=83 Identities=16% Similarity=0.063 Sum_probs=52.7
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc-------ccCCCCCe--eEEeeCCCChhHHH
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-------LMGDLGQI--VPMKFNPRDDNTIK 71 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-------~~~~~~~v--~~~~~Dl~~~~~~~ 71 (327)
|+..+..++|.|+|+ |.+|+.++..|+..|++|++.+++++....... ...+. +. ......+.-..++.
T Consensus 1 ~~~~~~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~i~~~~~l~ 78 (321)
T PRK07066 1 MAVITDIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQ-GLAPGASPARLRFVATIE 78 (321)
T ss_pred CCCCCCCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHc-CCChhhHHhhceecCCHH
Confidence 344444478999998 999999999999999999999998764322111 00000 00 00001111123466
Q ss_pred HHhccccEEEEccc
Q 047628 72 ATMAKANVVINLIG 85 (327)
Q Consensus 72 ~~~~~~d~vi~~a~ 85 (327)
++++++|.|+-++.
T Consensus 79 ~av~~aDlViEavp 92 (321)
T PRK07066 79 ACVADADFIQESAP 92 (321)
T ss_pred HHhcCCCEEEECCc
Confidence 78899999998874
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0025 Score=54.57 Aligned_cols=166 Identities=19% Similarity=0.223 Sum_probs=99.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
..+++.|+|+.| +|+--++...+-|++|++++++.++.++.++.++ .+.+..-..+++.+.++..-.|.++|++.
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LG----Ad~fv~~~~d~d~~~~~~~~~dg~~~~v~ 255 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLG----ADVFVDSTEDPDIMKAIMKTTDGGIDTVS 255 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcC----cceeEEecCCHHHHHHHHHhhcCcceeee
Confidence 357999999999 9988788777889999999999877777777776 33333223367777666665677777765
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTE 165 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~ 165 (327)
.... .....+++.++..| ++|+++-.......+.. .+.+.-..+- |.+.|..
T Consensus 256 ~~a~-----------~~~~~~~~~lk~~G---t~V~vg~p~~~~~~~~~-------------~lil~~~~I~-GS~vG~~ 307 (360)
T KOG0023|consen 256 NLAE-----------HALEPLLGLLKVNG---TLVLVGLPEKPLKLDTF-------------PLILGRKSIK-GSIVGSR 307 (360)
T ss_pred eccc-----------cchHHHHHHhhcCC---EEEEEeCcCCcccccch-------------hhhcccEEEE-eeccccH
Confidence 3211 11245778888877 78888865442221100 0001111111 2222321
Q ss_pred ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 166 DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.-......++.++. + ......+..+|+.+++.++.+.+-
T Consensus 308 -ket~E~Ldf~a~~~-i------k~~IE~v~~~~v~~a~erm~kgdV 346 (360)
T KOG0023|consen 308 -KETQEALDFVARGL-I------KSPIELVKLSEVNEAYERMEKGDV 346 (360)
T ss_pred -HHHHHHHHHHHcCC-C------cCceEEEehhHHHHHHHHHHhcCe
Confidence 12234444444332 2 123567788888888888776554
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0003 Score=55.02 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=51.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++++|+|+ |.+|..+++.|.+.| ++|++.+|++++........+ ...+..+..+ ..+.++++|+||.+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFG----ELGIAIAYLD---LEELLAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh----hcccceeecc---hhhccccCCEEEeC
Confidence 34689999998 899999999999986 889999998665433222211 1111223333 33347889999999
Q ss_pred ccccc
Q 047628 84 IGREY 88 (327)
Q Consensus 84 a~~~~ 88 (327)
.+...
T Consensus 89 ~~~~~ 93 (155)
T cd01065 89 TPVGM 93 (155)
T ss_pred cCCCC
Confidence 87643
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.00069 Score=56.37 Aligned_cols=73 Identities=25% Similarity=0.286 Sum_probs=48.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc----CCCC-CeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM----GDLG-QIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~----~~~~-~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|+|.|+||+|.+|+.+++.|.+.|++|.+.+|++++........ +... ....... +..++++++|+||-
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~~------~~~ea~~~aDvVil 74 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTGA------DNAEAAKRADVVIL 74 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEEe------ChHHHHhcCCEEEE
Confidence 58999999999999999999999999999999876543221110 0000 0011111 22455678999998
Q ss_pred cccc
Q 047628 83 LIGR 86 (327)
Q Consensus 83 ~a~~ 86 (327)
+...
T Consensus 75 avp~ 78 (219)
T TIGR01915 75 AVPW 78 (219)
T ss_pred ECCH
Confidence 8753
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0031 Score=53.07 Aligned_cols=105 Identities=15% Similarity=0.142 Sum_probs=67.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCch----------------------hhhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDP----------------------RHLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~----------------------~~~~~~~~~~~v~~~~~ 62 (327)
...+|+|+|+ |-+|+.++..|...|. ++++++++.-... ..+.+.....+++.+..
T Consensus 23 ~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~ 101 (240)
T TIGR02355 23 KASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA 101 (240)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 4578999999 7889999999999984 6777766542211 01111121123444433
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
.+ +.+.+.+.++++|+||.+... ......+-++|.+.+ + .+|+.++.+.
T Consensus 102 ~i-~~~~~~~~~~~~DlVvd~~D~-------------~~~r~~ln~~~~~~~-i-p~v~~~~~g~ 150 (240)
T TIGR02355 102 KL-DDAELAALIAEHDIVVDCTDN-------------VEVRNQLNRQCFAAK-V-PLVSGAAIRM 150 (240)
T ss_pred cC-CHHHHHHHhhcCCEEEEcCCC-------------HHHHHHHHHHHHHcC-C-CEEEEEeccc
Confidence 33 345677788899999988742 233345678888887 4 6777665543
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0031 Score=51.40 Aligned_cols=106 Identities=12% Similarity=0.147 Sum_probs=65.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCch----------------------hhhcccCCCCCeeEEe
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDP----------------------RHLKLMGDLGQIVPMK 61 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~----------------------~~~~~~~~~~~v~~~~ 61 (327)
++..+|+|+|++| +|+++++.|...|. ++++++.+.-... +.+++.....+++.+.
T Consensus 19 L~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~~ 97 (197)
T cd01492 19 LRSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVDT 97 (197)
T ss_pred HHhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEEe
Confidence 3467899999966 99999999999995 5777766532110 1112222222344444
Q ss_pred eCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
..+. +...+.++++|+||.+... ......+-++|++.+ + .+|+.++.+.+
T Consensus 98 ~~~~--~~~~~~~~~~dvVi~~~~~-------------~~~~~~ln~~c~~~~-i-p~i~~~~~G~~ 147 (197)
T cd01492 98 DDIS--EKPEEFFSQFDVVVATELS-------------RAELVKINELCRKLG-V-KFYATGVHGLF 147 (197)
T ss_pred cCcc--ccHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcC-C-CEEEEEecCCE
Confidence 4443 2234567789999977532 223345678888888 5 67777775543
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0031 Score=54.06 Aligned_cols=108 Identities=12% Similarity=0.093 Sum_probs=68.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc----------------------hhhhcccCCCCCeeEEe
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD----------------------PRHLKLMGDLGQIVPMK 61 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~----------------------~~~~~~~~~~~~v~~~~ 61 (327)
+...+|+|+|+ |-+|++++..|...|. ++++++.+.-.. ...+.......+++.+.
T Consensus 25 L~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~~ 103 (287)
T PRK08223 25 LRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAFP 103 (287)
T ss_pred HhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 34578999999 7789999999999985 677766653211 01111222122455555
Q ss_pred eCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
..++ ++.+.++++++|+||++.-.. +...-..+-++|++.+ + .+|+.|..+.
T Consensus 104 ~~l~-~~n~~~ll~~~DlVvD~~D~~-----------~~~~r~~ln~~c~~~~-i-P~V~~~~~g~ 155 (287)
T PRK08223 104 EGIG-KENADAFLDGVDVYVDGLDFF-----------EFDARRLVFAACQQRG-I-PALTAAPLGM 155 (287)
T ss_pred cccC-ccCHHHHHhCCCEEEECCCCC-----------cHHHHHHHHHHHHHcC-C-CEEEEeccCC
Confidence 5554 456777889999999775321 1133356778899998 4 6777766543
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0022 Score=52.57 Aligned_cols=88 Identities=24% Similarity=0.207 Sum_probs=62.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+.+++|||+|| |.+|..-++.|++.|.+|++++.........+... .+++++..++.. + .++++|.||-+.
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~---~~i~~~~~~~~~-~----dl~~~~lVi~at 77 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQ---GGITWLARCFDA-D----ILEGAFLVIAAT 77 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHc---CCEEEEeCCCCH-H----HhCCcEEEEECC
Confidence 45689999999 99999999999999999999987655332223222 368888887652 2 257888888654
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
+.. +....+...|++.+
T Consensus 78 ~d~-------------~ln~~i~~~a~~~~ 94 (205)
T TIGR01470 78 DDE-------------ELNRRVAHAARARG 94 (205)
T ss_pred CCH-------------HHHHHHHHHHHHcC
Confidence 421 12346777887766
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0019 Score=57.51 Aligned_cols=94 Identities=12% Similarity=0.117 Sum_probs=55.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHh-CCCE---EEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAK-MGSQ---VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~-~g~~---V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
++|.|+||||++|+.+++.|++ +.+. ++.++...+... ...+. +-.....++.+++. ++++|+||.+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~sg~~--~~~f~---g~~~~v~~~~~~~~----~~~~Divf~a 72 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQAGGA--APSFG---GKEGTLQDAFDIDA----LKKLDIIITC 72 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchhhCCc--ccccC---CCcceEEecCChhH----hcCCCEEEEC
Confidence 6899999999999999995555 4555 666554322211 11111 11122233444443 3679999998
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEecc
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCL 125 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~ 125 (327)
++. ..+..+...+.++| .+ .+|=.|+.
T Consensus 73 ~~~--------------~~s~~~~~~~~~aG-~~~~VID~Ss~ 100 (369)
T PRK06598 73 QGG--------------DYTNEVYPKLRAAG-WQGYWIDAAST 100 (369)
T ss_pred CCH--------------HHHHHHHHHHHhCC-CCeEEEECChH
Confidence 864 23456677777777 53 35555553
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0048 Score=52.18 Aligned_cols=104 Identities=14% Similarity=0.084 Sum_probs=67.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCch----------------------hhhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDP----------------------RHLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~----------------------~~~~~~~~~~~v~~~~~ 62 (327)
+..+|+|+|+ |-+|+++++.|...|. ++++++.+.-... ..+.+.....+++.+..
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~~~ 109 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETINA 109 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEEec
Confidence 4679999999 8899999999999995 6777766532110 11112221224455555
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.++ ++.+.+.++++|+||.|... ...-..+-++|++.+ + .+|+.+..+
T Consensus 110 ~i~-~~~~~~~~~~~DiVi~~~D~-------------~~~r~~ln~~~~~~~-i-p~v~~~~~g 157 (245)
T PRK05690 110 RLD-DDELAALIAGHDLVLDCTDN-------------VATRNQLNRACFAAK-K-PLVSGAAIR 157 (245)
T ss_pred cCC-HHHHHHHHhcCCEEEecCCC-------------HHHHHHHHHHHHHhC-C-EEEEeeecc
Confidence 553 45667788899999988632 233345777888887 4 577665543
|
|
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0012 Score=60.42 Aligned_cols=39 Identities=21% Similarity=0.112 Sum_probs=34.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP 45 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~ 45 (327)
.+|+|.|+|. |++|..++..|.++|++|+++++++++..
T Consensus 2 ~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~~~v~ 40 (415)
T PRK11064 2 SFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQHAVD 40 (415)
T ss_pred CccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCHHHHH
Confidence 3578999988 99999999999999999999999876643
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00085 Score=53.03 Aligned_cols=66 Identities=23% Similarity=0.193 Sum_probs=45.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
||+|.++|- |-.|+.+++.|+++|++|++.+|++++...... . .++. + ++..++++++|+|+-|..
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-~----g~~~--~-----~s~~e~~~~~dvvi~~v~ 66 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-A----GAEV--A-----DSPAEAAEQADVVILCVP 66 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-T----TEEE--E-----SSHHHHHHHBSEEEE-SS
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-h----hhhh--h-----hhhhhHhhcccceEeecc
Confidence 579999999 999999999999999999999998766433222 1 1222 1 345556677899988764
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0052 Score=47.34 Aligned_cols=101 Identities=20% Similarity=0.243 Sum_probs=64.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCch----------------------hhhcccCCCCCeeEEeeCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDP----------------------RHLKLMGDLGQIVPMKFNPR 65 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~----------------------~~~~~~~~~~~v~~~~~Dl~ 65 (327)
+|+|+|+ |-+|+.+++.|...|. ++++++.+.-... ..++.....-+++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 5899998 8899999999999996 6888866531110 01111121123444454544
Q ss_pred ChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+. ...+.+.++|+||.|... ......+.++|++.+ + .++..++.+
T Consensus 80 ~~-~~~~~~~~~diVi~~~d~-------------~~~~~~l~~~~~~~~-i-~~i~~~~~g 124 (143)
T cd01483 80 ED-NLDDFLDGVDLVIDAIDN-------------IAVRRALNRACKELG-I-PVIDAGGLG 124 (143)
T ss_pred hh-hHHHHhcCCCEEEECCCC-------------HHHHHHHHHHHHHcC-C-CEEEEcCCC
Confidence 33 335667889999988753 234467888999987 4 566666654
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0015 Score=56.05 Aligned_cols=74 Identities=14% Similarity=0.178 Sum_probs=46.6
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhC--CCEEEEe-eCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccc
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKM--GSQVLVP-FRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA 77 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~-~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~ 77 (327)
|++ |++++|.|+|. |.||+.+++.|.+. ++++.++ +|++++........+ ... -.+++.++++++
T Consensus 1 ~~~-m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~g---~~~-------~~~~~eell~~~ 68 (271)
T PRK13302 1 MSS-RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGLR---RPP-------PVVPLDQLATHA 68 (271)
T ss_pred CCC-CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhcC---CCc-------ccCCHHHHhcCC
Confidence 444 66789999998 99999999999873 6887755 555443222111111 001 112344456789
Q ss_pred cEEEEcccc
Q 047628 78 NVVINLIGR 86 (327)
Q Consensus 78 d~vi~~a~~ 86 (327)
|+|+-|++.
T Consensus 69 D~Vvi~tp~ 77 (271)
T PRK13302 69 DIVVEAAPA 77 (271)
T ss_pred CEEEECCCc
Confidence 999999864
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0013 Score=58.03 Aligned_cols=96 Identities=16% Similarity=0.175 Sum_probs=57.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHh-CCCE---EEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAK-MGSQ---VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~-~g~~---V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
.+.++|.|+||||++|+.+++.|.+ ..++ ++.+....+. .+.+. +.. .++.+... +++. +.++|+|
T Consensus 3 ~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~sa-Gk~~~-~~~-~~l~v~~~---~~~~----~~~~Div 72 (347)
T PRK06728 3 EKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSA-GKTVQ-FKG-REIIIQEA---KINS----FEGVDIA 72 (347)
T ss_pred CCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccC-CCCee-eCC-cceEEEeC---CHHH----hcCCCEE
Confidence 3457999999999999999999985 5665 5555443322 11111 111 12222222 3333 3679999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
|.+++. .....++..+.+.| ..+|=.|+..
T Consensus 73 f~a~~~--------------~~s~~~~~~~~~~G--~~VID~Ss~f 102 (347)
T PRK06728 73 FFSAGG--------------EVSRQFVNQAVSSG--AIVIDNTSEY 102 (347)
T ss_pred EECCCh--------------HHHHHHHHHHHHCC--CEEEECchhh
Confidence 988854 23355666666777 3566666644
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0024 Score=57.24 Aligned_cols=111 Identities=11% Similarity=0.070 Sum_probs=71.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-----EEEE--e--eCCCCCchhhhcccCC-----CCCeeEEeeCCCChhHHHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-----QVLV--P--FRGCEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-----~V~~--~--~R~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~ 72 (327)
.-||.|+|++|.+|++++..|+..|. +|.+ + +++.+........+.+ ..++.+ ..+ + .+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i-~~~--~----y~ 116 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSI-GID--P----YE 116 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEE-ecC--C----HH
Confidence 45899999999999999999988762 2333 3 6655553322211110 012211 111 2 35
Q ss_pred HhccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEec
Q 047628 73 TMAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISC 124 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss 124 (327)
.++++|+||-+||.... .+..+....|....+.+.+.+.++. +-..+|.+|.
T Consensus 117 ~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 117 VFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 67899999999998543 3456788899999999999998843 2234565654
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0006 Score=54.98 Aligned_cols=35 Identities=29% Similarity=0.353 Sum_probs=28.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
|+|.|+|. |++|..++..|.+.|++|++++.+++.
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~~~ 35 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDEEK 35 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHH
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCChHH
Confidence 78999977 999999999999999999999988654
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0076 Score=49.23 Aligned_cols=78 Identities=17% Similarity=0.192 Sum_probs=53.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCC---CCCchhhh------------------cccCCCCCeeEEee
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRG---CEDDPRHL------------------KLMGDLGQIVPMKF 62 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~---~~~~~~~~------------------~~~~~~~~v~~~~~ 62 (327)
++..+|+|+|+ |-+|+.++..|...|. ++++++++ .+...... .......+++.+..
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~~ 97 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYDE 97 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEeee
Confidence 34678999999 7789999999999997 69998887 33322110 01111123445555
Q ss_pred CCCChhHHHHHhccccEEEEcc
Q 047628 63 NPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+++ .+.+.+.++++|+||.+.
T Consensus 98 ~i~-~~~~~~~~~~~DlVi~a~ 118 (200)
T TIGR02354 98 KIT-EENIDKFFKDADIVCEAF 118 (200)
T ss_pred eCC-HhHHHHHhcCCCEEEECC
Confidence 553 467778888999999883
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0065 Score=50.93 Aligned_cols=105 Identities=17% Similarity=0.185 Sum_probs=65.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchh-----------------------hhcccCCCCCeeEEe
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPR-----------------------HLKLMGDLGQIVPMK 61 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~-----------------------~~~~~~~~~~v~~~~ 61 (327)
+..+|+|+|+ |-+|+++++.|...|. ++++++.+.-.... .+.......+++.+.
T Consensus 26 ~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~ 104 (231)
T PRK08328 26 KKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFV 104 (231)
T ss_pred hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEe
Confidence 4578999999 7789999999999995 67777654321100 011112112344444
Q ss_pred eCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
..+ +++.+.+.++++|+||.|.... ..-..+-++|++.+ + .+|+.++.+.
T Consensus 105 ~~~-~~~~~~~~l~~~D~Vid~~d~~-------------~~r~~l~~~~~~~~-i-p~i~g~~~g~ 154 (231)
T PRK08328 105 GRL-SEENIDEVLKGVDVIVDCLDNF-------------ETRYLLDDYAHKKG-I-PLVHGAVEGT 154 (231)
T ss_pred ccC-CHHHHHHHHhcCCEEEECCCCH-------------HHHHHHHHHHHHcC-C-CEEEEeeccC
Confidence 444 4456777888999999886431 22234556788887 4 6777666544
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0014 Score=51.86 Aligned_cols=57 Identities=21% Similarity=0.349 Sum_probs=46.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++|+|+|+++.+|..+++.|.++|.+|+++.|+. +++.+.+.++|+||.+.
T Consensus 42 l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~--------------------------~~l~~~l~~aDiVIsat 95 (168)
T cd01080 42 LAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT--------------------------KNLKEHTKQADIVIVAV 95 (168)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc--------------------------hhHHHHHhhCCEEEEcC
Confidence 4578999999977889999999999999999888752 34556777888888887
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+..
T Consensus 96 ~~~ 98 (168)
T cd01080 96 GKP 98 (168)
T ss_pred CCC
Confidence 653
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0019 Score=61.65 Aligned_cols=72 Identities=17% Similarity=0.141 Sum_probs=57.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
.+++|.|. |.+|+++++.|.++|++|+++++++++. +.+++. +...+.+|.++++.++++ ++++|+++-+.+
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~-~~~~~~----g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~ 490 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRV-DELRER----GIRAVLGNAANEEIMQLAHLDCARWLLLTIP 490 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHH-HHHHHC----CCeEEEcCCCCHHHHHhcCccccCEEEEEcC
Confidence 57899998 9999999999999999999999887653 223332 588999999999999865 467898875543
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0018 Score=57.09 Aligned_cols=96 Identities=21% Similarity=0.240 Sum_probs=57.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+.++|.|+||||++|..+++.|.++. .++..+....+. .+.+...+ ..+.+- |+ +. ..+.++|+||.
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~sa-G~~~~~~~--~~~~v~--~~---~~--~~~~~~Dvvf~ 72 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESA-GETLRFGG--KSVTVQ--DA---AE--FDWSQAQLAFF 72 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcC-CceEEECC--cceEEE--eC---ch--hhccCCCEEEE
Confidence 45799999999999999999999853 466666544322 12221111 012221 22 21 12367999998
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+++.. ....++..+.+.| . ++|=.|+..-
T Consensus 73 a~p~~--------------~s~~~~~~~~~~g-~-~VIDlS~~fR 101 (336)
T PRK08040 73 VAGRE--------------ASAAYAEEATNAG-C-LVIDSSGLFA 101 (336)
T ss_pred CCCHH--------------HHHHHHHHHHHCC-C-EEEECChHhc
Confidence 87542 2345666666677 3 6777776543
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.005 Score=55.09 Aligned_cols=107 Identities=16% Similarity=0.071 Sum_probs=70.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc---h-------------------hhhcccCCCCCeeEEe
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD---P-------------------RHLKLMGDLGQIVPMK 61 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~-------------------~~~~~~~~~~~v~~~~ 61 (327)
++..+|+|+|+ |-+|+++++.|...|. ++++++.+.-.. . ..+.......+++.+.
T Consensus 26 L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~~ 104 (355)
T PRK05597 26 LFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVSV 104 (355)
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEEE
Confidence 34579999999 7789999999999995 677776653111 0 1111222222455555
Q ss_pred eCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
..++ ++...+.++++|+||.|... ...-..+-++|.+.+ + .+|+.+..+..
T Consensus 105 ~~i~-~~~~~~~~~~~DvVvd~~d~-------------~~~r~~~n~~c~~~~-i-p~v~~~~~g~~ 155 (355)
T PRK05597 105 RRLT-WSNALDELRDADVILDGSDN-------------FDTRHLASWAAARLG-I-PHVWASILGFD 155 (355)
T ss_pred eecC-HHHHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcC-C-CEEEEEEecCe
Confidence 5554 45667788999999999742 222334667888887 4 68887776553
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0018 Score=59.64 Aligned_cols=68 Identities=24% Similarity=0.296 Sum_probs=48.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|+|+|+||+|.+|..+++.|.+.|++|++.+|+++.........+ +.. ..+..+.+.++|+||-+...
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~g----v~~-------~~~~~e~~~~aDvVIlavp~ 68 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELG----VEY-------ANDNIDAAKDADIVIISVPI 68 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcC----Cee-------ccCHHHHhccCCEEEEecCH
Confidence 589999999999999999999999999999998655322211111 211 12234556789999988754
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00097 Score=57.84 Aligned_cols=37 Identities=27% Similarity=0.229 Sum_probs=33.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP 45 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~ 45 (327)
.+|.|+|+ |.+|..++..|+..|++|++.+++++...
T Consensus 6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~ 42 (286)
T PRK07819 6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELAT 42 (286)
T ss_pred cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHH
Confidence 58999999 99999999999999999999999987643
|
|
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0036 Score=60.73 Aligned_cols=101 Identities=12% Similarity=0.119 Sum_probs=69.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCC---chh------------------hhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCED---DPR------------------HLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~---~~~------------------~~~~~~~~~~v~~~~~ 62 (327)
+..+|+|+|. | +|++++..|...|. ++++++.+.-. ... .+.......+++.+..
T Consensus 106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~ 183 (722)
T PRK07877 106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD 183 (722)
T ss_pred hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4578999999 8 99999999999984 78887665311 111 1111222235666666
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
.++ ++++.++++++|+||.|.- |+..-..+-++|.+.+ + -+|+.++
T Consensus 184 ~i~-~~n~~~~l~~~DlVvD~~D-------------~~~~R~~ln~~a~~~~-i-P~i~~~~ 229 (722)
T PRK07877 184 GLT-EDNVDAFLDGLDVVVEECD-------------SLDVKVLLREAARARR-I-PVLMATS 229 (722)
T ss_pred cCC-HHHHHHHhcCCCEEEECCC-------------CHHHHHHHHHHHHHcC-C-CEEEEcC
Confidence 665 6788999999999999973 2334445668888888 4 5666664
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0077 Score=49.70 Aligned_cols=105 Identities=16% Similarity=0.213 Sum_probs=67.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCC---CCchh------------------hhcccCCCCCeeEEee
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGC---EDDPR------------------HLKLMGDLGQIVPMKF 62 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~---~~~~~------------------~~~~~~~~~~v~~~~~ 62 (327)
+...+|+|+|+ |-+|+.+++.|...|. ++++++.+. +.... .+.......+++.+..
T Consensus 26 L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~~ 104 (212)
T PRK08644 26 LKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHNE 104 (212)
T ss_pred HhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEee
Confidence 34578999998 8889999999999996 588887762 11110 1111121224445555
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccC
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLG 126 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~ 126 (327)
.+++ +.+.+.++++|+||.|.- |......+.+.|.+. + + .+|+.+..+
T Consensus 105 ~i~~-~~~~~~~~~~DvVI~a~D-------------~~~~r~~l~~~~~~~~~-~-p~I~~~~~~ 153 (212)
T PRK08644 105 KIDE-DNIEELFKDCDIVVEAFD-------------NAETKAMLVETVLEHPG-K-KLVAASGMA 153 (212)
T ss_pred ecCH-HHHHHHHcCCCEEEECCC-------------CHHHHHHHHHHHHHhCC-C-CEEEeehhh
Confidence 5543 556678889999998852 123335677788887 6 3 677666543
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0011 Score=58.28 Aligned_cols=89 Identities=16% Similarity=0.274 Sum_probs=66.6
Q ss_pred cccEEEEcccccccc---CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC-chHHHhHHHHHHHHH
Q 047628 76 KANVVINLIGREYET---RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP-SRVFSTKAAAEEAVL 147 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~---~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~-~~y~~~K~~~E~~~~ 147 (327)
+++.+|.+.|.+... .......++.+....|+++.. +.+ .+++|.++|.+..--+. .+|..+|...|+-+.
T Consensus 203 ~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~-~K~~vIvTSfn~~~~s~~f~Yfk~K~~LE~dl~ 281 (410)
T PF08732_consen 203 DIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTG-NKKLVIVTSFNNNAISSMFPYFKTKGELENDLQ 281 (410)
T ss_pred hhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCC-CceEEEEEecCcchhhhhhhhhHHHHHHHHHHH
Confidence 456788887776532 223444556666677777766 566 78999999988765444 799999999999998
Q ss_pred hhC----CCeEEEecCeeecCC
Q 047628 148 REL----PWATIMRPAAMIGTE 165 (327)
Q Consensus 148 ~~~----~~~~i~r~~~~~G~~ 165 (327)
..- -+.+|+|||.+.|..
T Consensus 282 ~~l~~~l~~lvILRPGplvG~h 303 (410)
T PF08732_consen 282 NLLPPKLKHLVILRPGPLVGEH 303 (410)
T ss_pred hhcccccceEEEecCccccCCC
Confidence 873 578999999999963
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00082 Score=58.10 Aligned_cols=76 Identities=22% Similarity=0.374 Sum_probs=51.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++++|+|+ |.+|+.++..|.+.| .+|++++|+.++.............+. .++ ++.+.+.++|+||++
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~---~~~----~~~~~~~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAE---LDL----ELQEELADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccee---ecc----cchhccccCCEEEEC
Confidence 44678999998 999999999999999 799999998765433222221110111 111 223556789999999
Q ss_pred ccccc
Q 047628 84 IGREY 88 (327)
Q Consensus 84 a~~~~ 88 (327)
.+...
T Consensus 193 Tp~g~ 197 (278)
T PRK00258 193 TSAGM 197 (278)
T ss_pred CcCCC
Confidence 87643
|
|
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00015 Score=46.86 Aligned_cols=35 Identities=23% Similarity=0.397 Sum_probs=24.4
Q ss_pred cccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 290 TIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 290 ~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
..+.+.++++++|||+|+ +|++++++..+|++++-
T Consensus 24 ~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np 59 (62)
T PF13950_consen 24 HLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNP 59 (62)
T ss_dssp EE-B--HHHHHHC----SSSHHHHHHHHHHHHHHST
T ss_pred hhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCc
Confidence 445556799999999998 99999999999999863
|
... |
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.04 Score=51.04 Aligned_cols=91 Identities=10% Similarity=0.130 Sum_probs=61.3
Q ss_pred ccCCcEEEEEcCC---CccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 4 VYSGIIATVFGTT---GFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 4 ~~~~~~ilI~Gat---G~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
.+..++|+|+|+| |.+|..+++.|++.|| +|+.+..+.... . ++. -..++.++-..+|
T Consensus 4 l~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i----~------G~~-------~~~sl~~lp~~~D 66 (447)
T TIGR02717 4 LFNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI----L------GVK-------AYPSVLEIPDPVD 66 (447)
T ss_pred ccCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc----C------Ccc-------ccCCHHHCCCCCC
Confidence 4556899999998 6789999999999998 688776543221 0 111 1223444334678
Q ss_pred EEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 79 VVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 79 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.++-+.+. ..+..+++.|.+.| ++.+|.+|+-.
T Consensus 67 lavi~vp~--------------~~~~~~l~e~~~~g-v~~~vi~s~gf 99 (447)
T TIGR02717 67 LAVIVVPA--------------KYVPQVVEECGEKG-VKGAVVITAGF 99 (447)
T ss_pred EEEEecCH--------------HHHHHHHHHHHhcC-CCEEEEECCCc
Confidence 88766543 34466788888888 88888777643
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0044 Score=51.97 Aligned_cols=113 Identities=15% Similarity=0.136 Sum_probs=71.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEE---EeeCC-CCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVL---VPFRG-CEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~---~~~R~-~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+-||.|.||.|-||+.|.-.| +....|. +.+-. ...-...+.... -........-++.+.+++.++|+|+-
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaaDlSHI~----T~s~V~g~~g~~~L~~al~~advVvI 102 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAADLSHIN----TNSSVVGFTGADGLENALKGADVVVI 102 (345)
T ss_pred cceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccccccccC----CCCceeccCChhHHHHHhcCCCEEEe
Confidence 468999999999999976644 4443222 22111 111111111111 11112233346799999999999999
Q ss_pred cccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 83 LIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 83 ~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
-||.+... ..++.+.+|......|..++.+..+-..+.++|.
T Consensus 103 PAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 103 PAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred cCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 99886432 3468999999999999999888763345556664
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0031 Score=47.13 Aligned_cols=72 Identities=13% Similarity=0.253 Sum_probs=43.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhC-CCEEEEe-eCCCCCchhhhcccCCCCCee-EEeeCCCChhHHHHHhccccEEEEccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKM-GSQVLVP-FRGCEDDPRHLKLMGDLGQIV-PMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
++.|+|++|.+|..+++.|.+. ++++.++ .|+.+. .+...... +.+. .+..++ +.+.+. ..++|+||.|.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~-~~~~~~~~--~~~~~~~~~~~-~~~~~~--~~~~DvV~~~~~ 74 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSA-GKRVSEAG--PHLKGEVVLEL-EPEDFE--ELAVDIVFLALP 74 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhc-CcCHHHHC--ccccccccccc-ccCChh--hcCCCEEEEcCC
Confidence 5889999999999999999985 7888888 443222 22222111 1121 111222 223333 257899998876
Q ss_pred c
Q 047628 86 R 86 (327)
Q Consensus 86 ~ 86 (327)
.
T Consensus 75 ~ 75 (122)
T smart00859 75 H 75 (122)
T ss_pred c
Confidence 4
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0016 Score=58.75 Aligned_cols=56 Identities=23% Similarity=0.207 Sum_probs=44.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
..++|.|+||.|.+|..+++.|.+.|++|++.+|++. ++..+++.++|+||-|..
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~-------------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW-------------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc-------------------------hhHHHHHhcCCEEEEeCc
Confidence 3478999999999999999999999999999988521 123345667888888875
Q ss_pred c
Q 047628 86 R 86 (327)
Q Consensus 86 ~ 86 (327)
.
T Consensus 152 ~ 152 (374)
T PRK11199 152 I 152 (374)
T ss_pred H
Confidence 4
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0029 Score=57.17 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=54.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|++|+|+|+ |.+|+-++..+.+.|++|++++.++......+. -..+.+|+.|.+.+.++.+.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~a-------d~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVA-------DEVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhC-------ceEEecCCCCHHHHHHHHhcCCEEEe
Confidence 468999999 899999999999999999999887655332221 23556789999999999999998753
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0076 Score=54.14 Aligned_cols=105 Identities=16% Similarity=0.096 Sum_probs=68.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCC---ch-------------------hhhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCED---DP-------------------RHLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~---~~-------------------~~~~~~~~~~~v~~~~~ 62 (327)
+..+|+|+|+ |-+|++++..|...|. ++++++.+.-. .. ..+......-+++.+..
T Consensus 40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~~ 118 (370)
T PRK05600 40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNALRE 118 (370)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEeee
Confidence 4578999999 7789999999999995 78887776311 10 01111221123555555
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
.++ ++.+.+.++++|+||.|.-. ...-..+-++|.+.+ + .+|+.+..+.
T Consensus 119 ~i~-~~~~~~~~~~~DlVid~~Dn-------------~~~r~~in~~~~~~~-i-P~v~~~~~g~ 167 (370)
T PRK05600 119 RLT-AENAVELLNGVDLVLDGSDS-------------FATKFLVADAAEITG-T-PLVWGTVLRF 167 (370)
T ss_pred ecC-HHHHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcC-C-CEEEEEEecC
Confidence 553 55677788999999998742 233345667888887 4 5777766543
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0038 Score=54.58 Aligned_cols=107 Identities=18% Similarity=0.144 Sum_probs=71.6
Q ss_pred EEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCC----CCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDL----GQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|.|+|+ |.+|+.++..|+..| .++++++++.+........+... .......+ .+ .+.++++|+||.+
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~aDiVIit 73 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADADIVVIT 73 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCCCEEEEc
Confidence 468898 889999999999888 68999999876543222211100 11122211 12 3477899999999
Q ss_pred cccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 84 IGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 84 a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+|.+.. .+..+....|....+.+++.+++.++-..++..|
T Consensus 74 ag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 74 AGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 997543 3445677889999999999999887322444444
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0019 Score=59.22 Aligned_cols=79 Identities=18% Similarity=0.140 Sum_probs=49.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeE-----E-eeCCCChhHHHHHhccccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVP-----M-KFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~-----~-~~Dl~~~~~~~~~~~~~d~ 79 (327)
|+|.|+|. |.+|..++..|.+.|++|+++++++++......... ..+.++- + .+.+.-..+..++++++|+
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 57999987 999999999999999999999998765322111000 0000000 0 0001111244556788999
Q ss_pred EEEccccc
Q 047628 80 VINLIGRE 87 (327)
Q Consensus 80 vi~~a~~~ 87 (327)
||-|.+..
T Consensus 80 vii~vpt~ 87 (411)
T TIGR03026 80 IIICVPTP 87 (411)
T ss_pred EEEEeCCC
Confidence 99887654
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0082 Score=54.54 Aligned_cols=106 Identities=14% Similarity=0.083 Sum_probs=68.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCC---chh-------------------hhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCED---DPR-------------------HLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~---~~~-------------------~~~~~~~~~~v~~~~~ 62 (327)
+..+|+|+|+ |-+|++++..|...|. ++++++.+.-. ... .+.......+++.+..
T Consensus 41 ~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 119 (392)
T PRK07878 41 KNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLHEF 119 (392)
T ss_pred hcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEEec
Confidence 4578999999 7789999999999985 57776654311 100 1111121123444555
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
+++ .+...+.++++|+||.|... ...-..+-++|.+.+ + .||+.+..+..
T Consensus 120 ~i~-~~~~~~~~~~~D~Vvd~~d~-------------~~~r~~ln~~~~~~~-~-p~v~~~~~g~~ 169 (392)
T PRK07878 120 RLD-PSNAVELFSQYDLILDGTDN-------------FATRYLVNDAAVLAG-K-PYVWGSIYRFE 169 (392)
T ss_pred cCC-hhHHHHHHhcCCEEEECCCC-------------HHHHHHHHHHHHHcC-C-CEEEEEeccCE
Confidence 554 34567788999999988632 223344677888887 4 68887776554
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0075 Score=52.98 Aligned_cols=53 Identities=21% Similarity=0.288 Sum_probs=43.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.|+|.|+|+ |.+|+.+++.|.+.|++|++.+|+... ++.++++++|+||-+..
T Consensus 4 ~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~~-------------------------~~~~~~~~advvi~~vp 56 (308)
T PRK14619 4 PKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSGL-------------------------SLAAVLADADVIVSAVS 56 (308)
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCCC-------------------------CHHHHHhcCCEEEEECC
Confidence 478999988 999999999999999999999987431 23455667898887764
|
|
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0078 Score=48.03 Aligned_cols=100 Identities=13% Similarity=0.170 Sum_probs=62.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCC---CCch------------------hhhcccCCCCCeeEEeeCCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGC---EDDP------------------RHLKLMGDLGQIVPMKFNPRD 66 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~---~~~~------------------~~~~~~~~~~~v~~~~~Dl~~ 66 (327)
+|+|+|+ |-+|+.+++.|...|. ++++++.+. +... ..+.......+++.+...++
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~- 78 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKID- 78 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecC-
Confidence 5899998 8889999999999996 588887764 1111 01111121123444455553
Q ss_pred hhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHc-CCcceEEEEecc
Q 047628 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCL 125 (327)
Q Consensus 67 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~ 125 (327)
.+.+.+.++++|+||.+... ...-..+.+.+.+. + + .+|+.+..
T Consensus 79 ~~~~~~~l~~~DlVi~~~d~-------------~~~r~~i~~~~~~~~~-i-p~i~~~~~ 123 (174)
T cd01487 79 ENNLEGLFGDCDIVVEAFDN-------------AETKAMLAESLLGNKN-K-PVVCASGM 123 (174)
T ss_pred hhhHHHHhcCCCEEEECCCC-------------HHHHHHHHHHHHHHCC-C-CEEEEehh
Confidence 35677788999999988532 22334567777666 6 4 56665543
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.026 Score=44.19 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=44.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++|+|+|| |-+|...++.|++.|++|++++.. .. ..+..+ +.+++....+.+ + -++++|.||-+.
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp~--~~-~~l~~l---~~i~~~~~~~~~-~----dl~~a~lViaaT 78 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSPE--IC-KEMKEL---PYITWKQKTFSN-D----DIKDAHLIYAAT 78 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCc--cC-HHHHhc---cCcEEEecccCh-h----cCCCceEEEECC
Confidence 34689999999 999999999999999999998532 21 122222 234443333322 2 256788887654
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0098 Score=57.41 Aligned_cols=89 Identities=20% Similarity=0.188 Sum_probs=66.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
..+|+|.|. |.+|+.+++.|.++|+++++++.+++... ..+.. +...+.+|.++++.+.++ ++++|.+|-+..
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~-~~~~~----g~~v~~GDat~~~~L~~agi~~A~~vvv~~~ 473 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIE-TLRKF----GMKVFYGDATRMDLLESAGAAKAEVLINAID 473 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHH-HHHhc----CCeEEEEeCCCHHHHHhcCCCcCCEEEEEeC
Confidence 368999999 99999999999999999999999876532 22222 478899999999998864 567899887753
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
.. +....++..+++..
T Consensus 474 d~-------------~~n~~i~~~ar~~~ 489 (621)
T PRK03562 474 DP-------------QTSLQLVELVKEHF 489 (621)
T ss_pred CH-------------HHHHHHHHHHHHhC
Confidence 21 22345666677664
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0016 Score=56.56 Aligned_cols=36 Identities=31% Similarity=0.160 Sum_probs=32.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++|.|+|+ |.+|..++..|+..|++|++++++++.
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~ 38 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEA 38 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHH
Confidence 368999998 999999999999999999999998754
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.011 Score=49.05 Aligned_cols=99 Identities=13% Similarity=0.005 Sum_probs=67.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a 84 (327)
+|+|+|+|||+- ++.|++.|...+..+.+.+-.... ...... ....+.+-..+.+.+.+.++ ++|.||+..
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~~~~~~~~~ss~t~~g-~~l~~~-----~~~~~~~G~l~~e~l~~~l~e~~i~llIDAT 74 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLAAAPVDIILSSLTGYG-AKLAEQ-----IGPVRVGGFLGAEGLAAFLREEGIDLLIDAT 74 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhhccCccEEEEEccccc-ccchhc-----cCCeeecCcCCHHHHHHHHHHcCCCEEEECC
Confidence 578999999998 999999999988544444332222 111111 12244555667888998886 489999886
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
.+.. ...+.|.+++|+..| +..+-|-=-
T Consensus 75 HPyA-----------a~iS~Na~~aake~g-ipy~r~eRP 102 (257)
T COG2099 75 HPYA-----------ARISQNAARAAKETG-IPYLRLERP 102 (257)
T ss_pred ChHH-----------HHHHHHHHHHHHHhC-CcEEEEECC
Confidence 5421 356789999999999 876665444
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.012 Score=50.11 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=65.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCc---h-------------------hhhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDD---P-------------------RHLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~---~-------------------~~~~~~~~~~~v~~~~~ 62 (327)
...+|+|+|+ |-+|+++++.|...| -++++++.+.-.. . ..+.......+++.+.
T Consensus 29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i~- 106 (268)
T PRK15116 29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVD- 106 (268)
T ss_pred cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEEe-
Confidence 4578999999 889999999999999 5788876653110 0 0011111112233332
Q ss_pred CCCChhHHHHHhc-cccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 63 NPRDDNTIKATMA-KANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 63 Dl~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+..+++...+.+. ++|+||.+.... .....|.++|++.+ + .+|.+.+.+
T Consensus 107 ~~i~~e~~~~ll~~~~D~VIdaiD~~-------------~~k~~L~~~c~~~~-i-p~I~~gGag 156 (268)
T PRK15116 107 DFITPDNVAEYMSAGFSYVIDAIDSV-------------RPKAALIAYCRRNK-I-PLVTTGGAG 156 (268)
T ss_pred cccChhhHHHHhcCCCCEEEEcCCCH-------------HHHHHHHHHHHHcC-C-CEEEECCcc
Confidence 2334566666664 699999987532 23356888999987 5 566555544
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.003 Score=56.85 Aligned_cols=75 Identities=13% Similarity=0.129 Sum_probs=55.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
..+++|+|+ |-+|..+++.|...|.+|++++|++++........+ ..+..+..+++.+.+.+.++|+||.+++.
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g-----~~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFG-----GRIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcC-----ceeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 467999988 899999999999999999999998655322111111 12234556778888899999999998865
Q ss_pred c
Q 047628 87 E 87 (327)
Q Consensus 87 ~ 87 (327)
.
T Consensus 241 ~ 241 (370)
T TIGR00518 241 P 241 (370)
T ss_pred C
Confidence 3
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0028 Score=55.42 Aligned_cols=107 Identities=15% Similarity=0.095 Sum_probs=66.7
Q ss_pred EEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhh---hcccCCC--CCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRH---LKLMGDL--GQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~---~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|.|+|+ |.+|..++..|+..|. +|++++++++..... +...... ....+ ... .| . +.++++|+||.+
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~I-~~t-~d---~-~~l~dADiVIit 73 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTKV-TGT-ND---Y-EDIAGSDVVVIT 73 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeEE-EEc-CC---H-HHhCCCCEEEEe
Confidence 578999 9999999999988876 999999987643211 1111000 01111 111 12 2 347899999999
Q ss_pred cccccccC--cchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 84 IGREYETR--NYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 84 a~~~~~~~--~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
++.+.... ..+....|....+.+++.+.+..+-..+|..|
T Consensus 74 ~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 74 AGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 98653322 23455668888888888888876222344444
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0022 Score=56.20 Aligned_cols=76 Identities=21% Similarity=0.294 Sum_probs=61.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh-HHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN-TIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~-~~~~~~~~~d~vi~~a 84 (327)
+++||+.|+ ||+.+.++..|.+++ .+|++.+|......+.... .+++.+..|+.+++ .+.+..+..|.++.+.
T Consensus 2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~~~~~~~~~~----~~~~av~ldv~~~~~~L~~~v~~~D~viSLl 76 (445)
T KOG0172|consen 2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTLKDAEALVKG----INIKAVSLDVADEELALRKEVKPLDLVISLL 76 (445)
T ss_pred CcceEEecC-ccccchHHHHHhhcCCceEEEehhhHHHHHHHhcC----CCccceEEEccchHHHHHhhhcccceeeeec
Confidence 478999998 999999999998874 7899988876664433332 45899999999988 8888889999999987
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
..+
T Consensus 77 P~t 79 (445)
T KOG0172|consen 77 PYT 79 (445)
T ss_pred cch
Confidence 653
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0012 Score=53.28 Aligned_cols=67 Identities=22% Similarity=0.264 Sum_probs=45.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh-cccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|++.| ||+|.||+.|+++|.+.||+|..-+|+.++..... ...+ +.+ ...+..++.+.+|+||-...
T Consensus 2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~--~~i--------~~~~~~dA~~~aDVVvLAVP 69 (211)
T COG2085 2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG--PLI--------TGGSNEDAAALADVVVLAVP 69 (211)
T ss_pred cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc--ccc--------ccCChHHHHhcCCEEEEecc
Confidence 55555 56699999999999999999999977766543322 2222 111 23345667788999997764
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0094 Score=53.91 Aligned_cols=105 Identities=13% Similarity=0.091 Sum_probs=66.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCC-------------------c---hhhhcccCCCCCeeEEe
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCED-------------------D---PRHLKLMGDLGQIVPMK 61 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~-------------------~---~~~~~~~~~~~~v~~~~ 61 (327)
++..+|+|+|+ |-+|++++..|...|. ++++++++.-. . ...+.......+++.+.
T Consensus 133 l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~ 211 (376)
T PRK08762 133 LLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQ 211 (376)
T ss_pred HhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 34578999988 7799999999999996 68888876211 0 01111112112233444
Q ss_pred eCCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 62 ~Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
..+ +.+.+.+.++++|+||++.... ..-..+-++|++.+ + .+|+.+..+
T Consensus 212 ~~~-~~~~~~~~~~~~D~Vv~~~d~~-------------~~r~~ln~~~~~~~-i-p~i~~~~~g 260 (376)
T PRK08762 212 ERV-TSDNVEALLQDVDVVVDGADNF-------------PTRYLLNDACVKLG-K-PLVYGAVFR 260 (376)
T ss_pred ccC-ChHHHHHHHhCCCEEEECCCCH-------------HHHHHHHHHHHHcC-C-CEEEEEecc
Confidence 444 3456777888999999987431 22234677888887 4 677776544
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0039 Score=51.08 Aligned_cols=72 Identities=18% Similarity=0.135 Sum_probs=48.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+.+++|+|+|| |-+|...++.|++.|.+|+++++........+... ..+.+..-++. ...+.++|.||-+.
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~---~~i~~~~~~~~-----~~~l~~adlViaaT 78 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEE---GKIRWKQKEFE-----PSDIVDAFLVIAAT 78 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhC---CCEEEEecCCC-----hhhcCCceEEEEcC
Confidence 45789999999 99999999999999999999986543321222111 23555443322 22356789888765
Q ss_pred c
Q 047628 85 G 85 (327)
Q Consensus 85 ~ 85 (327)
+
T Consensus 79 ~ 79 (202)
T PRK06718 79 N 79 (202)
T ss_pred C
Confidence 4
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0018 Score=48.52 Aligned_cols=35 Identities=23% Similarity=0.358 Sum_probs=29.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCE 42 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~ 42 (327)
.++|.|+|+ |.+|.+|.+.|.+.||+|..+ +|+..
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~ 45 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPA 45 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcc
Confidence 579999999 999999999999999999887 45543
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0053 Score=56.99 Aligned_cols=77 Identities=16% Similarity=0.142 Sum_probs=50.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-cccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-KANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-~~d~vi~~ 83 (327)
+..++++|+|++| +|...++.|++.|++|.+.+++..........+.. .++.+..++ ++..+ +. ++|.||..
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~-~g~~~~~~~--~~~~~---~~~~~d~vV~s 75 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE-EGIKVICGS--HPLEL---LDEDFDLMVKN 75 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh-cCCEEEeCC--CCHHH---hcCcCCEEEEC
Confidence 4467899999987 99999999999999999998765432221111110 124444332 22222 33 48999999
Q ss_pred ccccc
Q 047628 84 IGREY 88 (327)
Q Consensus 84 a~~~~ 88 (327)
.|...
T Consensus 76 ~gi~~ 80 (447)
T PRK02472 76 PGIPY 80 (447)
T ss_pred CCCCC
Confidence 88754
|
|
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0064 Score=52.70 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=52.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
.+|.|.|+||+.|..|++.|..+. .++..+.-+... + +.+..++++++|+||.+.+.
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~~-------------------~---~~~~~~~~~~~D~vFlalp~ 59 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRRK-------------------D---AAERAKLLNAADVAILCLPD 59 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEeccccc-------------------C---cCCHhHhhcCCCEEEECCCH
Confidence 379999999999999999999875 466666432210 0 11223455789999887753
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
.....++..+.+.| + ++|=.|+.
T Consensus 60 --------------~~s~~~~~~~~~~g-~-~VIDlSad 82 (310)
T TIGR01851 60 --------------DAAREAVSLVDNPN-T-CIIDASTA 82 (310)
T ss_pred --------------HHHHHHHHHHHhCC-C-EEEECChH
Confidence 12345555555666 3 67767764
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0013 Score=56.96 Aligned_cols=70 Identities=27% Similarity=0.451 Sum_probs=51.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++++|+|. |.+|+.+++.|...|.+|++..|+++.... .... ....+ ..+++.+.++++|+||++.
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~-~~~~----g~~~~-----~~~~l~~~l~~aDiVint~ 217 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR-ITEM----GLIPF-----PLNKLEEKVAEIDIVINTI 217 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHC----CCeee-----cHHHHHHHhccCCEEEECC
Confidence 34689999999 889999999999999999999998654221 1111 12211 2456777888999999987
Q ss_pred c
Q 047628 85 G 85 (327)
Q Consensus 85 ~ 85 (327)
+
T Consensus 218 P 218 (287)
T TIGR02853 218 P 218 (287)
T ss_pred C
Confidence 4
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0062 Score=45.04 Aligned_cols=85 Identities=14% Similarity=0.065 Sum_probs=51.5
Q ss_pred cEEEEEcCC---CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 8 IIATVFGTT---GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 8 ~~ilI~Gat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
++|+|+|+| +..|..+++.|.+.|++|+.+.-+..... +... ..++.+.=..+|.++.+.
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~~~i~----------G~~~-------y~sl~e~p~~iDlavv~~ 63 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKGGEIL----------GIKC-------YPSLAEIPEPIDLAVVCV 63 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTCSEET----------TEE--------BSSGGGCSST-SEEEE-S
T ss_pred CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCceEEC----------cEEe-------eccccCCCCCCCEEEEEc
Confidence 579999988 77899999999999999999854432210 1111 122222124578888776
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
.. ..+..+++.|.+.| ++.+++.++
T Consensus 64 ~~--------------~~~~~~v~~~~~~g-~~~v~~~~g 88 (116)
T PF13380_consen 64 PP--------------DKVPEIVDEAAALG-VKAVWLQPG 88 (116)
T ss_dssp -H--------------HHHHHHHHHHHHHT--SEEEE-TT
T ss_pred CH--------------HHHHHHHHHHHHcC-CCEEEEEcc
Confidence 43 34467888888888 888888887
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.013 Score=48.91 Aligned_cols=105 Identities=11% Similarity=0.121 Sum_probs=65.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc---h-------------------hhhcccCCCCCeeEEe
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD---P-------------------RHLKLMGDLGQIVPMK 61 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~-------------------~~~~~~~~~~~v~~~~ 61 (327)
++..+|+|+|. |-+|+++++.|...|. ++++++.+.-.. . ..+.......+++.+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 34578999999 7889999999999995 677776553111 0 0111112112344444
Q ss_pred eCCCChhHHHHHhc-cccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 62 FNPRDDNTIKATMA-KANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 62 ~Dl~~~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
..++ ++++.+.+. ++|+||.|... ......|.++|++.+ + .+|...+.+
T Consensus 88 ~~i~-~~~~~~l~~~~~D~VvdaiD~-------------~~~k~~L~~~c~~~~-i-p~I~s~g~g 137 (231)
T cd00755 88 EFLT-PDNSEDLLGGDPDFVVDAIDS-------------IRAKVALIAYCRKRK-I-PVISSMGAG 137 (231)
T ss_pred eecC-HhHHHHHhcCCCCEEEEcCCC-------------HHHHHHHHHHHHHhC-C-CEEEEeCCc
Confidence 4443 455666664 58999998642 233456889999987 5 555554443
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.002 Score=45.84 Aligned_cols=67 Identities=21% Similarity=0.261 Sum_probs=45.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC---CEEEEe-eCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG---SQVLVP-FRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~-~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
||.|+|+ |.+|.+|++.|++.| ++|... .|++++........+ +..... +..++++.+|+||-+.
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~----~~~~~~------~~~~~~~~advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG----VQATAD------DNEEAAQEADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT----TEEESE------EHHHHHHHTSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc----cccccC------ChHHhhccCCEEEEEE
Confidence 5788865 999999999999999 999966 888776433322221 222221 3455666899999887
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
.+
T Consensus 70 ~p 71 (96)
T PF03807_consen 70 KP 71 (96)
T ss_dssp -G
T ss_pred CH
Confidence 54
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0027 Score=51.94 Aligned_cols=71 Identities=20% Similarity=0.194 Sum_probs=47.4
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
.++..|+|+|+|. |.+|+++++.|.+.|++|++.+++++......... ..+.+ | .+++.. .++|+++.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~----g~~~v--~---~~~l~~--~~~Dv~vp 91 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELF----GATVV--A---PEEIYS--VDADVFAP 91 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc----CCEEE--c---chhhcc--ccCCEEEe
Confidence 3456789999999 78999999999999999999888754422221111 12222 2 122211 26999998
Q ss_pred ccc
Q 047628 83 LIG 85 (327)
Q Consensus 83 ~a~ 85 (327)
|+.
T Consensus 92 ~A~ 94 (200)
T cd01075 92 CAL 94 (200)
T ss_pred ccc
Confidence 875
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0016 Score=56.78 Aligned_cols=69 Identities=23% Similarity=0.365 Sum_probs=51.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
..++++|+|. |.+|+.+++.|...|.+|++.+|+++.. ......+ .+++ ..+++.+.+.++|+||++++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~-~~~~~~G----~~~~-----~~~~l~~~l~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL-ARITEMG----LSPF-----HLSELAEEVGKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHcC----Ceee-----cHHHHHHHhCCCCEEEECCC
Confidence 4689999998 8899999999999999999999986542 2222221 2222 23567778889999999864
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0073 Score=52.51 Aligned_cols=85 Identities=14% Similarity=0.215 Sum_probs=50.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC--E-EEEeeCCCC--CchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS--Q-VLVPFRGCE--DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~--~-V~~~~R~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+++|.|+||||.+|+.+++.|.++.. + +.++...++ +....+..+ -..+.-|..+... ++++|.+|
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f~~~~~~~~AS~rSaG~~~~~f~~~-----~~~v~~~~~~~~~----~~~~Divf 71 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHFPFEELVLLASARSAGKKYIEFGGK-----SIGVPEDAADEFV----FSDVDIVF 71 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCCCcceEEEEecccccCCccccccCc-----cccCccccccccc----cccCCEEE
Confidence 46899999999999999999998653 2 344333222 211111111 0111111122222 33899999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
.++|-. .+..+...+.++|
T Consensus 72 ~~ag~~--------------~s~~~~p~~~~~G 90 (334)
T COG0136 72 FAAGGS--------------VSKEVEPKAAEAG 90 (334)
T ss_pred EeCchH--------------HHHHHHHHHHHcC
Confidence 999742 2366778888888
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0023 Score=55.11 Aligned_cols=73 Identities=16% Similarity=0.244 Sum_probs=48.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
.++++|+|+ |.+|+.++..|++.|++|+++.|+.++.............+... ++ ++ ..+.++|+||++.+.
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~--~~---~~--~~~~~~DivInatp~ 188 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF--SM---DE--LPLHRVDLIINATSA 188 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe--ch---hh--hcccCccEEEECCCC
Confidence 578999999 78999999999999999999999876543322222111112221 11 11 123568999999876
Q ss_pred c
Q 047628 87 E 87 (327)
Q Consensus 87 ~ 87 (327)
.
T Consensus 189 g 189 (270)
T TIGR00507 189 G 189 (270)
T ss_pred C
Confidence 4
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0023 Score=57.47 Aligned_cols=74 Identities=23% Similarity=0.298 Sum_probs=58.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...+++||+|+ |-+|.-++++|.++| .+|+++.|+.++........+ ++....+++...+..+|+||.+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~---------~~~~~l~el~~~l~~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG---------AEAVALEELLEALAEADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC---------CeeecHHHHHHhhhhCCEEEEe
Confidence 35689999999 999999999999999 689999999887554433322 4445677888999999999998
Q ss_pred ccccc
Q 047628 84 IGREY 88 (327)
Q Consensus 84 a~~~~ 88 (327)
.+.+.
T Consensus 246 Tsa~~ 250 (414)
T COG0373 246 TSAPH 250 (414)
T ss_pred cCCCc
Confidence 76543
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.015 Score=52.70 Aligned_cols=105 Identities=13% Similarity=0.024 Sum_probs=66.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc----------------------hhhhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD----------------------PRHLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~----------------------~~~~~~~~~~~~v~~~~~ 62 (327)
+..+|+|+|+ |-+|+++++.|...|. ++++++.+.-.. ...+.......+++.+..
T Consensus 37 ~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~~~ 115 (390)
T PRK07411 37 KAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLYET 115 (390)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEEec
Confidence 4578999999 7789999999999985 566665542110 011112221224555555
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
.++. +...+.+.++|+||.|... ...-..+-++|.+.+ ..+|+.+..+.
T Consensus 116 ~~~~-~~~~~~~~~~D~Vvd~~d~-------------~~~r~~ln~~~~~~~--~p~v~~~~~g~ 164 (390)
T PRK07411 116 RLSS-ENALDILAPYDVVVDGTDN-------------FPTRYLVNDACVLLN--KPNVYGSIFRF 164 (390)
T ss_pred ccCH-HhHHHHHhCCCEEEECCCC-------------HHHHHHHHHHHHHcC--CCEEEEEEccC
Confidence 5543 4566778899999999753 222344667888887 46777766544
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0064 Score=55.45 Aligned_cols=70 Identities=17% Similarity=0.279 Sum_probs=53.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~ 83 (327)
++|+|+|+|+ |..|..++..+.+.|++|++++.++......+. -..+..|..|.+.+.++++ ++|+|+..
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a-------d~~~~~~~~d~~~l~~~~~~~~id~vi~~ 82 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA-------HRSHVIDMLDGDALRAVIEREKPDYIVPE 82 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh-------hheEECCCCCHHHHHHHHHHhCCCEEEEe
Confidence 4679999997 789999999999999999999887654322211 1245678888888888887 68998854
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0047 Score=53.83 Aligned_cols=105 Identities=12% Similarity=0.063 Sum_probs=70.4
Q ss_pred EEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCC-----CCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 12 VFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDL-----GQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 12 I~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|+|+ |.+|++++..|+..+. ++.+++++.+........+... .++.+. + .+ .+.++++|+||-+|
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~-~--~~----~~~~~daDivVita 72 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIR-S--GD----YSDCKDADLVVITA 72 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEe-c--CC----HHHHCCCCEEEECC
Confidence 4676 9999999999988773 7999998765543222211110 122222 1 12 35678999999999
Q ss_pred ccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 85 GREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 85 ~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|.... .+..+....|....+.+.+.++++++-..++.+|.
T Consensus 73 g~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 114 (299)
T TIGR01771 73 GAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN 114 (299)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 98543 34467888999999999999998873234555553
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0024 Score=58.11 Aligned_cols=75 Identities=13% Similarity=0.225 Sum_probs=54.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++|+|+|+ |-.|+.+++.|.+.| .++++..|+.++........+ .. .....+++.+.+..+|+||+|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~---~~-----~~~~~~~l~~~l~~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFR---NA-----SAHYLSELPQLIKKADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhc---CC-----eEecHHHHHHHhccCCEEEEC
Confidence 34689999999 888999999999998 479999998766433222221 11 122346778888999999999
Q ss_pred ccccc
Q 047628 84 IGREY 88 (327)
Q Consensus 84 a~~~~ 88 (327)
.+.+.
T Consensus 250 T~a~~ 254 (414)
T PRK13940 250 VNVLE 254 (414)
T ss_pred cCCCC
Confidence 87643
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.016 Score=50.50 Aligned_cols=103 Identities=15% Similarity=0.140 Sum_probs=66.5
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCch----------------------hhhcccCCCCCeeEEeeCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDP----------------------RHLKLMGDLGQIVPMKFNPR 65 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~----------------------~~~~~~~~~~~v~~~~~Dl~ 65 (327)
+|||+|+ |-+|..+++.|...|. ++++++.+.-... ..+.++....+++.+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 5899998 8899999999999985 6777765532210 11112222234566666776
Q ss_pred ChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+.+...+.++++|+||.+.-. ...-..+-+.|...+ + .+|..++.+.
T Consensus 80 ~~~~~~~f~~~~DvVv~a~Dn-------------~~ar~~in~~c~~~~-i-p~I~~gt~G~ 126 (312)
T cd01489 80 DPDFNVEFFKQFDLVFNALDN-------------LAARRHVNKMCLAAD-V-PLIESGTTGF 126 (312)
T ss_pred CccchHHHHhcCCEEEECCCC-------------HHHHHHHHHHHHHCC-C-CEEEEecCcc
Confidence 643344667889999988632 233455777888887 4 6777766554
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0034 Score=57.33 Aligned_cols=150 Identities=11% Similarity=0.024 Sum_probs=89.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC---C----CEEEEeeCC--CCCchhhhcccCC-----CCCeeEEeeCCCChhHHHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM---G----SQVLVPFRG--CEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~---g----~~V~~~~R~--~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~ 72 (327)
.-+|+||||+|.||.+|+-.+..- | ..+++++.. .+......-.+.+ ..++.+. .| -.+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~-~~------~~e 195 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVT-TD------LDV 195 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEE-EC------CHH
Confidence 468999999999999999988752 2 246666663 2221111111100 0122222 21 146
Q ss_pred HhccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCC-cceEEEEeccCC----------CCCCC-------
Q 047628 73 TMAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGG-IMRFIQISCLGA----------SSSSP------- 132 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~-v~~~v~~Ss~~v----------~~~~~------- 132 (327)
.++++|+||-++|.... .+..+..+.|....+.+.++..+.++ -.+++.+.|--+ .+.-|
T Consensus 196 a~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t~i~~k~apgiP~~rVig~ 275 (452)
T cd05295 196 AFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKTSILIKYAPSIPRKNIIAV 275 (452)
T ss_pred HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHHHHcCCCCHHHEEEe
Confidence 78899999999997543 34467889999999999999998873 135555554111 11222
Q ss_pred chHHHhHHHHHHHHHhhCCCeEEEecCeeecC
Q 047628 133 SRVFSTKAAAEEAVLRELPWATIMRPAAMIGT 164 (327)
Q Consensus 133 ~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~ 164 (327)
...- +-+..-.+.+..+++..-++-..|+|.
T Consensus 276 gtld-s~R~r~~LA~kl~V~~~~V~~~~VwGe 306 (452)
T cd05295 276 ARLQ-ENRAKALLARKLNVNSAGIKDVIVWGN 306 (452)
T ss_pred cchH-HHHHHHHHHHHhCcCHHHceeeEEEEc
Confidence 1111 222223334455677777777788887
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0061 Score=52.34 Aligned_cols=67 Identities=15% Similarity=0.132 Sum_probs=46.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
||+|.|+|+ |.+|..+++.|.+.| ++|++.+|++++.. .+.... ++.. . .+..++++++|+||-+
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~-~~~~~~---g~~~-----~--~~~~~~~~~advVil~ 69 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSPEKRA-ALAEEY---GVRA-----A--TDNQEAAQEADVVVLA 69 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCHHHHH-HHHHhc---CCee-----c--CChHHHHhcCCEEEEE
Confidence 578999998 999999999999988 78999999865532 222110 1211 1 1233445789999987
Q ss_pred cc
Q 047628 84 IG 85 (327)
Q Consensus 84 a~ 85 (327)
..
T Consensus 70 v~ 71 (267)
T PRK11880 70 VK 71 (267)
T ss_pred cC
Confidence 64
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.018 Score=49.38 Aligned_cols=94 Identities=19% Similarity=0.261 Sum_probs=56.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHh-CCCEEEEeeC-CCCCc-hhhhcccCCCC--CeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAK-MGSQVLVPFR-GCEDD-PRHLKLMGDLG--QIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~R-~~~~~-~~~~~~~~~~~--~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
++|.|+|++|.+|+.+++.+.+ .+.++.++.. ..+.. ........... .+.+ . .+.+.+ ..++|+||.
T Consensus 2 ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d~~~~~~~~~~~~~~~~~~~~gv~~-~---~d~~~l---~~~~DvVId 74 (266)
T TIGR00036 2 IKVAVAGAAGRMGRELIKAALAAEGLQLVAAFERHGSSLQGTDAGELAGIGKVGVPV-T---DDLEAV---ETDPDVLID 74 (266)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccCCCHHHhcCcCcCCcee-e---CCHHHh---cCCCCEEEE
Confidence 6899999999999999999986 4788777654 32221 11111110000 1111 1 234444 356899999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+..+ ......++.|.++| + ++|.-++
T Consensus 75 fT~p--------------~~~~~~~~~al~~g-~-~vVigtt 100 (266)
T TIGR00036 75 FTTP--------------EGVLNHLKFALEHG-V-RLVVGTT 100 (266)
T ss_pred CCCh--------------HHHHHHHHHHHHCC-C-CEEEECC
Confidence 8743 34466888888888 3 5554443
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0092 Score=52.71 Aligned_cols=97 Identities=25% Similarity=0.319 Sum_probs=61.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC-hhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD-DNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~d~vi~~a~ 85 (327)
..+++|+|++|.+|..+++.+...|.+|++++|++++. ..+...+ .-..+ |..+ .+.+.+. .++|.|+++++
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~~---~~~~~--~~~~~~~~~~~~-~~~d~v~~~~g 235 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKL-KILKELG---ADYVI--DGSKFSEDVKKL-GGADVVIELVG 235 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHH-HHHHHcC---CcEEE--ecHHHHHHHHhc-cCCCEEEECCC
Confidence 46899999999999999999999999999998876542 2222222 11111 2111 1222222 36899999987
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
.. ......+.+...| ++|.++....
T Consensus 236 ~~--------------~~~~~~~~~~~~g---~~v~~g~~~~ 260 (332)
T cd08259 236 SP--------------TIEESLRSLNKGG---RLVLIGNVTP 260 (332)
T ss_pred hH--------------HHHHHHHHhhcCC---EEEEEcCCCC
Confidence 42 1234455555554 7887776543
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0043 Score=58.21 Aligned_cols=77 Identities=14% Similarity=0.011 Sum_probs=49.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc-------ccCCCCCeeE-EeeCCCChhHHHHHhccccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK-------LMGDLGQIVP-MKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~-------~~~~~~~v~~-~~~Dl~~~~~~~~~~~~~d~ 79 (327)
|+|.|+|+ |.+|+.++..|+..|++|++.+++++....... .......... ..+.+.-.+++.++++++|+
T Consensus 5 ~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 58999987 999999999999999999999998765322100 0000000000 00011112356677889999
Q ss_pred EEEccc
Q 047628 80 VINLIG 85 (327)
Q Consensus 80 vi~~a~ 85 (327)
||-+..
T Consensus 84 Vieavp 89 (495)
T PRK07531 84 IQESVP 89 (495)
T ss_pred EEEcCc
Confidence 997764
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0075 Score=51.71 Aligned_cols=68 Identities=10% Similarity=0.121 Sum_probs=42.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC--CCEEEE-eeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM--GSQVLV-PFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~-~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
||+|.|+|. |.+|+.+++.|.+. +.++.. .+|++++.. .+.... +... .+++.+++.++|+|+.|
T Consensus 1 mmrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~-~~a~~~---~~~~-------~~~~~ell~~~DvVvi~ 68 (265)
T PRK13304 1 MLKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNLEKAE-NLASKT---GAKA-------CLSIDELVEDVDLVVEC 68 (265)
T ss_pred CCEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCHHHHH-HHHHhc---CCee-------ECCHHHHhcCCCEEEEc
Confidence 368999997 99999999999876 466554 455543322 121110 1111 12344455789999999
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
++.
T Consensus 69 a~~ 71 (265)
T PRK13304 69 ASV 71 (265)
T ss_pred CCh
Confidence 854
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0021 Score=55.91 Aligned_cols=77 Identities=22% Similarity=0.204 Sum_probs=49.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc------C-CCCCeeE-----EeeCCCChhHHHHHhc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM------G-DLGQIVP-----MKFNPRDDNTIKATMA 75 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~------~-~~~~v~~-----~~~Dl~~~~~~~~~~~ 75 (327)
++|.|+|+ |.+|..++..|+++|++|++.+++++......... + ....+.. ....+.-..++.++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 57999999 99999999999999999999999876543221100 0 0000000 0000111234567788
Q ss_pred cccEEEEccc
Q 047628 76 KANVVINLIG 85 (327)
Q Consensus 76 ~~d~vi~~a~ 85 (327)
++|+||-|..
T Consensus 81 ~aD~Vi~avp 90 (288)
T PRK09260 81 DADLVIEAVP 90 (288)
T ss_pred CCCEEEEecc
Confidence 9999998875
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0026 Score=51.01 Aligned_cols=70 Identities=19% Similarity=0.250 Sum_probs=49.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++|.|+|. |.||+.+++.|..-|.+|++.+|....... .... .+ ...++.++++.+|+|+.+.
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~-~~~~----~~--------~~~~l~ell~~aDiv~~~~ 99 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEG-ADEF----GV--------EYVSLDELLAQADIVSLHL 99 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHH-HHHT----TE--------EESSHHHHHHH-SEEEE-S
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhh-cccc----cc--------eeeehhhhcchhhhhhhhh
Confidence 45689999998 999999999999999999999998765320 1110 11 1235677888899999877
Q ss_pred cccc
Q 047628 85 GREY 88 (327)
Q Consensus 85 ~~~~ 88 (327)
..+.
T Consensus 100 plt~ 103 (178)
T PF02826_consen 100 PLTP 103 (178)
T ss_dssp SSST
T ss_pred cccc
Confidence 6543
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0075 Score=52.86 Aligned_cols=67 Identities=19% Similarity=0.262 Sum_probs=54.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+++|.|+|| |.+|+=++.+-..-|++|++++-+++.....+. -..+.++.+|++.+.++.+.||+|=
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va-------~~~i~~~~dD~~al~ela~~~DViT 67 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQVA-------DRVIVAAYDDPEALRELAAKCDVIT 67 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhhcc-------cceeecCCCCHHHHHHHHhhCCEEE
Confidence 468999999 999999999999999999999877766443332 2455677789999999999999884
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0079 Score=53.24 Aligned_cols=97 Identities=22% Similarity=0.333 Sum_probs=62.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hHHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NTIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--~~d~vi 81 (327)
..+|||+||+|-+|+..++.+...|+.+++.+.++++.. .+...+.. +. .|+.+. +.+.+... ++|+|+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd---~v--i~y~~~~~~~~v~~~t~g~gvDvv~ 216 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGAD---HV--INYREEDFVEQVRELTGGKGVDVVL 216 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCC---EE--EcCCcccHHHHHHHHcCCCCceEEE
Confidence 478999999999999999988888977777666655533 44444421 11 123232 33334443 589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
++.|-. .....+++++..| +++.+...+
T Consensus 217 D~vG~~--------------~~~~~l~~l~~~G---~lv~ig~~~ 244 (326)
T COG0604 217 DTVGGD--------------TFAASLAALAPGG---RLVSIGALS 244 (326)
T ss_pred ECCCHH--------------HHHHHHHHhccCC---EEEEEecCC
Confidence 998752 1233555555555 777777655
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0038 Score=54.02 Aligned_cols=77 Identities=25% Similarity=0.269 Sum_probs=52.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
..++++|+|+ |-.|+.++..|.+.|. +|+++.|+.++........+....+.. +...+++...+.++|+||++.
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~----~~~~~~~~~~~~~~DiVInaT 198 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITR----LEGDSGGLAIEKAAEVLVSTV 198 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCccee----ccchhhhhhcccCCCEEEECC
Confidence 4578999999 7779999999999995 799999997765433332221111111 222234555667899999998
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+..
T Consensus 199 p~g 201 (282)
T TIGR01809 199 PAD 201 (282)
T ss_pred CCC
Confidence 764
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0024 Score=58.54 Aligned_cols=73 Identities=25% Similarity=0.385 Sum_probs=53.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++++|+|+ |.+|..+++.|.+.| .+|++++|+.++........+ ...+ +.+++.+.+.++|+||.+
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g----~~~i-----~~~~l~~~l~~aDvVi~a 247 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG----GEAV-----KFEDLEEYLAEADIVISS 247 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC----CeEe-----eHHHHHHHHhhCCEEEEC
Confidence 34579999998 999999999999999 789999998765332222222 1111 235677788899999999
Q ss_pred cccc
Q 047628 84 IGRE 87 (327)
Q Consensus 84 a~~~ 87 (327)
.+..
T Consensus 248 T~s~ 251 (417)
T TIGR01035 248 TGAP 251 (417)
T ss_pred CCCC
Confidence 7643
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0097 Score=55.46 Aligned_cols=102 Identities=11% Similarity=0.138 Sum_probs=65.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC-------------hh-----
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD-------------DN----- 68 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~-------------~~----- 68 (327)
..+|+|+|+ |-+|...+..+...|.+|+++++++++.. ..++.+ .+++..|..+ .+
T Consensus 165 g~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle-~aeslG----A~~v~i~~~e~~~~~~gya~~~s~~~~~~~ 238 (509)
T PRK09424 165 PAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAE-QVESMG----AEFLELDFEEEGGSGDGYAKVMSEEFIKAE 238 (509)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcC----CeEEEeccccccccccchhhhcchhHHHHH
Confidence 579999999 99999999999999999999999877633 333333 3333222211 11
Q ss_pred --HHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 69 --TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 69 --~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
.+.+.++++|+||.+++......+. ..+...++.++..+ .++.++.
T Consensus 239 ~~~~~~~~~gaDVVIetag~pg~~aP~-------lit~~~v~~mkpGg---vIVdvg~ 286 (509)
T PRK09424 239 MALFAEQAKEVDIIITTALIPGKPAPK-------LITAEMVASMKPGS---VIVDLAA 286 (509)
T ss_pred HHHHHhccCCCCEEEECCCCCcccCcc-------hHHHHHHHhcCCCC---EEEEEcc
Confidence 1122235799999999875433331 11345666666554 5777765
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.0061 Score=52.73 Aligned_cols=67 Identities=16% Similarity=0.198 Sum_probs=45.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|+|.|+|. |.+|..++..|.+.|++|++.+|+++..... ...+ .+.. ..+ .. +.++++|+||-|...
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a-~~~g---~~~~----~~~--~~-~~~~~aDlVilavp~ 67 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERA-IERG---LVDE----AST--DL-SLLKDCDLVILALPI 67 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCC---Cccc----ccC--CH-hHhcCCCEEEEcCCH
Confidence 47999995 9999999999999999999999976543222 1111 0110 111 11 246789999988753
|
|
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.013 Score=52.11 Aligned_cols=93 Identities=12% Similarity=0.103 Sum_probs=55.4
Q ss_pred cEEEEEcCCCccHHHHHHHHH-hCCC---EEEEeeCCCCC-chhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLA-KMGS---QVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll-~~g~---~V~~~~R~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
++|.|+||||.+|+.+++.|. ++++ ++++++-..+. ....+. +.....-++.+. +.+.++|++|.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~------~~~~~v~~~~~~----~~~~~vDivff 70 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG------GTTGTLQDAFDI----DALKALDIIIT 70 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC------CCcceEEcCccc----ccccCCCEEEE
Confidence 479999999999999999999 5555 34555433222 111111 111112233222 23568999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEecc
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCL 125 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~ 125 (327)
+++. ..+..+...++++| .. .+|=-||.
T Consensus 71 a~g~--------------~~s~~~~p~~~~aG-~~~~VIDnSSa 99 (366)
T TIGR01745 71 CQGG--------------DYTNEIYPKLRESG-WQGYWIDAASS 99 (366)
T ss_pred cCCH--------------HHHHHHHHHHHhCC-CCeEEEECChh
Confidence 9874 33567778888887 43 34444443
|
|
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.022 Score=47.65 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=64.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCC---chh-------------------hhcccCCCCCeeEEeeCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCED---DPR-------------------HLKLMGDLGQIVPMKFNPR 65 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~---~~~-------------------~~~~~~~~~~v~~~~~Dl~ 65 (327)
+|||+|+ |-+|..+++.|...|. ++++++.+.-. ..+ .+......-+++.+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 5899998 8889999999999985 57777665321 100 0111121224556666665
Q ss_pred ChhHH-HHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 66 DDNTI-KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 66 ~~~~~-~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+.+.+ .+.++++|+||.+.. |...-..+-+.|...+ + .+|..++.+.
T Consensus 80 ~~~~~~~~f~~~~DvVi~a~D-------------n~~aR~~ln~~c~~~~-i-plI~~g~~G~ 127 (234)
T cd01484 80 PEQDFNDTFFEQFHIIVNALD-------------NIIARRYVNGMLIFLI-V-PLIESGTEGF 127 (234)
T ss_pred hhhhchHHHHhCCCEEEECCC-------------CHHHHHHHHHHHHHcC-C-CEEEEcccCC
Confidence 44333 356788999998753 2344456777888887 4 6777666544
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.015 Score=50.81 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=50.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|+|.|+|. |.+|..+++.|.+.|++|.+.+|++++... +...+ ... ..+.+++.+.++.+|+|+-+...
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~-l~~~g----~~~----~~s~~~~~~~~~~~dvIi~~vp~ 69 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKA-MKEDR----TTG----VANLRELSQRLSAPRVVWVMVPH 69 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcC----Ccc----cCCHHHHHhhcCCCCEEEEEcCc
Confidence 47999997 999999999999999999999998765332 22211 111 13556666667778999988643
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0076 Score=52.25 Aligned_cols=81 Identities=16% Similarity=0.114 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCC---CchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCE---DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
..++++|+|+.|- +++++..|...|. +|+++.|+.+ +...................++.+.+.+.+.+.++|.||
T Consensus 123 ~~k~vlvlGaGGa-arAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~~~~~~aDivI 201 (288)
T PRK12749 123 KGKTMVLLGAGGA-STAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADILT 201 (288)
T ss_pred CCCEEEEECCcHH-HHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhhhhcccCCEEE
Confidence 4578999999555 9999999998885 8999999864 222221211111011111122322333555667899999
Q ss_pred Eccccc
Q 047628 82 NLIGRE 87 (327)
Q Consensus 82 ~~a~~~ 87 (327)
|+.+..
T Consensus 202 NaTp~G 207 (288)
T PRK12749 202 NGTKVG 207 (288)
T ss_pred ECCCCC
Confidence 987653
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0094 Score=53.01 Aligned_cols=102 Identities=16% Similarity=0.130 Sum_probs=58.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhh-cccC-----CCCC-eeEEe-eCCCChhHHHHHhccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHL-KLMG-----DLGQ-IVPMK-FNPRDDNTIKATMAKA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~-~~~~-----~~~~-v~~~~-~Dl~~~~~~~~~~~~~ 77 (327)
|+||.|.|. |.+|+.+++.+.++ +.++.++..........+ ...+ ..+. ...+. .++.-.+.+.+.+.++
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~~~~~~~~la~~~G~~~~~~~~~~~~~~~~~~i~V~~~~~el~~~v 79 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKTKPDYEARVAVEKGYPLYVADPEREKAFEEAGIPVAGTIEDLLEKA 79 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECCChHHHHHHHHhcCCCccccCccccccccCCceEEcCChhHhhccC
Confidence 468999999 99999999988865 578888765332111111 1000 0000 00000 0010012234455789
Q ss_pred cEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 78 NVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 78 d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
|+||.|++.. .....++.+.++| +++|+.|+.
T Consensus 80 DVVIdaT~~~--------------~~~e~a~~~~~aG--k~VI~~~~~ 111 (341)
T PRK04207 80 DIVVDATPGG--------------VGAKNKELYEKAG--VKAIFQGGE 111 (341)
T ss_pred CEEEECCCch--------------hhHHHHHHHHHCC--CEEEEcCCC
Confidence 9999998652 2345667777888 467766663
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.01 Score=52.79 Aligned_cols=96 Identities=21% Similarity=0.244 Sum_probs=60.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc-cCCCCCeeEEeeCCCCh----hHHHHHh-ccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL-MGDLGQIVPMKFNPRDD----NTIKATM-AKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~~v~~~~~Dl~~~----~~~~~~~-~~~d~v 80 (327)
..+|||+||+|.+|..+++.+...|.+|+++++++++. ..+.. ++ +..+ .|..+. +.+.+.. .++|+|
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~-~~~~~~lG----a~~v-i~~~~~~~~~~~i~~~~~~gvd~v 225 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKV-DLLKNKLG----FDDA-FNYKEEPDLDAALKRYFPNGIDIY 225 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcC----Ccee-EEcCCcccHHHHHHHhCCCCcEEE
Confidence 46899999999999999998888899999988876553 22222 33 1111 122221 2222222 368999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
+++.|. ......++.++..| +++.++..
T Consensus 226 ~d~~g~--------------~~~~~~~~~l~~~G---~iv~~G~~ 253 (338)
T cd08295 226 FDNVGG--------------KMLDAVLLNMNLHG---RIAACGMI 253 (338)
T ss_pred EECCCH--------------HHHHHHHHHhccCc---EEEEeccc
Confidence 998763 12244566666665 77777654
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0028 Score=55.75 Aligned_cols=72 Identities=24% Similarity=0.322 Sum_probs=52.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
..++|+|+|+ |.+|..+++.|.+.| .+|++++|++++........+ ... .+.+++.+.+.++|+||.+.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g----~~~-----~~~~~~~~~l~~aDvVi~at 246 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELG----GNA-----VPLDELLELLNEADVVISAT 246 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcC----CeE-----EeHHHHHHHHhcCCEEEECC
Confidence 4689999998 999999999998866 689999998765433323222 111 23356777788899999998
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+..
T Consensus 247 ~~~ 249 (311)
T cd05213 247 GAP 249 (311)
T ss_pred CCC
Confidence 753
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK10537 voltage-gated potassium channel; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.022 Score=51.62 Aligned_cols=70 Identities=17% Similarity=0.091 Sum_probs=53.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a 84 (327)
+.+++|.|. |.+|+.+++.|.++|++++++..+.. ..... .+..++.+|.+|++.+.++ ++++++|+-+.
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~--~~~~~-----~g~~vI~GD~td~e~L~~AgI~~A~aVI~~t 310 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL--EHRLP-----DDADLIPGDSSDSAVLKKAGAARARAILALR 310 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh--hhhcc-----CCCcEEEeCCCCHHHHHhcCcccCCEEEEcC
Confidence 357889888 88999999999999999988875522 11111 2577899999999999875 56789998655
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0088 Score=53.22 Aligned_cols=75 Identities=21% Similarity=0.294 Sum_probs=51.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc----cccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----KANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~vi~ 82 (327)
.+.|||.||+|-+|+..++.+...|...++..++.++ .+..+.++ .. ...|+.+++..+...+ ++|+|++
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~lG----Ad-~vvdy~~~~~~e~~kk~~~~~~DvVlD 231 (347)
T KOG1198|consen 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKLG----AD-EVVDYKDENVVELIKKYTGKGVDVVLD 231 (347)
T ss_pred CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHcC----Cc-EeecCCCHHHHHHHHhhcCCCccEEEE
Confidence 5789999999999999999888888555555555555 33344443 11 1457777655554444 4899999
Q ss_pred ccccc
Q 047628 83 LIGRE 87 (327)
Q Consensus 83 ~a~~~ 87 (327)
|++..
T Consensus 232 ~vg~~ 236 (347)
T KOG1198|consen 232 CVGGS 236 (347)
T ss_pred CCCCC
Confidence 99864
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.003 Score=58.06 Aligned_cols=73 Identities=26% Similarity=0.356 Sum_probs=53.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++|+|+|+ |-+|..+++.|...|. +|++.+|++++........+ . +..+.+++.+.+.++|+||.+
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g----~-----~~~~~~~~~~~l~~aDvVI~a 249 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG----G-----EAIPLDELPEALAEADIVISS 249 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC----C-----cEeeHHHHHHHhccCCEEEEC
Confidence 34689999998 9999999999999996 79999998765432222222 1 122335667778899999999
Q ss_pred cccc
Q 047628 84 IGRE 87 (327)
Q Consensus 84 a~~~ 87 (327)
.+..
T Consensus 250 T~s~ 253 (423)
T PRK00045 250 TGAP 253 (423)
T ss_pred CCCC
Confidence 7653
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.0053 Score=53.46 Aligned_cols=36 Identities=25% Similarity=0.288 Sum_probs=32.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
++|.|+|+ |.+|..++..|+..|++|++.+++++..
T Consensus 4 ~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l 39 (291)
T PRK06035 4 KVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSEEIL 39 (291)
T ss_pred cEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 58999998 9999999999999999999999987653
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.017 Score=51.05 Aligned_cols=97 Identities=21% Similarity=0.258 Sum_probs=61.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHH---HHh--ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK---ATM--AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~---~~~--~~~d~vi 81 (327)
..+|||+|++|-+|..+++.+...|.+|+++++++++. ..+...+ +.. ..|..+.+.+. +.. +++|+|+
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~-~~~~~lG----a~~-vi~~~~~~~~~~~~~~~~~~gvdvv~ 212 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV-AYLKKLG----FDV-AFNYKTVKSLEETLKKASPDGYDCYF 212 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHcC----CCE-EEeccccccHHHHHHHhCCCCeEEEE
Confidence 46899999999999999988888899999998876552 3333333 211 11222221222 222 2589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
++.|.. .....++.++..| +++.++...
T Consensus 213 d~~G~~--------------~~~~~~~~l~~~G---~iv~~G~~~ 240 (325)
T TIGR02825 213 DNVGGE--------------FSNTVIGQMKKFG---RIAICGAIS 240 (325)
T ss_pred ECCCHH--------------HHHHHHHHhCcCc---EEEEecchh
Confidence 988631 1234556666665 788776543
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0043 Score=53.76 Aligned_cols=37 Identities=22% Similarity=0.109 Sum_probs=33.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
+++|.|+|+ |.+|..++..|+..|++|++++++++..
T Consensus 3 ~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~~~~ 39 (282)
T PRK05808 3 IQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISDAAV 39 (282)
T ss_pred ccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence 458999999 9999999999999999999999887654
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0091 Score=51.55 Aligned_cols=57 Identities=25% Similarity=0.368 Sum_probs=45.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++|.|+|.+|.+|+.++..|+++|++|++..|... ++.++.+.+|+||-+.
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~--------------------------~l~e~~~~ADIVIsav 210 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST--------------------------DAKALCRQADIVVAAV 210 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC--------------------------CHHHHHhcCCEEEEec
Confidence 45789999999999999999999999999999866432 2445556778888777
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
|..
T Consensus 211 g~~ 213 (301)
T PRK14194 211 GRP 213 (301)
T ss_pred CCh
Confidence 653
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.0085 Score=51.65 Aligned_cols=55 Identities=18% Similarity=0.370 Sum_probs=44.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++++|+|++|.+|+.++..|++.|.+|+++.|.. .++.+.++++|+||++.
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t--------------------------~~L~~~~~~aDIvI~At 210 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT--------------------------QNLPELVKQADIIVGAV 210 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc--------------------------hhHHHHhccCCEEEEcc
Confidence 4568999999999999999999999999998887621 23455557889999888
Q ss_pred c
Q 047628 85 G 85 (327)
Q Consensus 85 ~ 85 (327)
|
T Consensus 211 G 211 (283)
T PRK14192 211 G 211 (283)
T ss_pred C
Confidence 6
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.032 Score=47.95 Aligned_cols=41 Identities=27% Similarity=0.342 Sum_probs=34.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK 49 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~ 49 (327)
++|..+|- |-.|..+++.|+++||+|++.+|++++....+.
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~ 41 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGHEVTVYNRTPEKAAELLA 41 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCCEEEEEeCChhhhhHHHH
Confidence 46888887 999999999999999999999999888544433
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.028 Score=48.21 Aligned_cols=70 Identities=13% Similarity=0.145 Sum_probs=42.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
||||.|+|. |.+|+.+++.|.+. +.++.++..............+ ..+.. . .+.+++ -.++|+|+.|++
T Consensus 1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~~--~~~~~-~---~d~~~l---~~~~DvVve~t~ 70 (265)
T PRK13303 1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRALG--EAVRV-V---SSVDAL---PQRPDLVVECAG 70 (265)
T ss_pred CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhhc--cCCee-e---CCHHHh---ccCCCEEEECCC
Confidence 379999999 99999999999876 5676666533222111111110 01111 1 234444 256899999987
Q ss_pred c
Q 047628 86 R 86 (327)
Q Consensus 86 ~ 86 (327)
.
T Consensus 71 ~ 71 (265)
T PRK13303 71 H 71 (265)
T ss_pred H
Confidence 5
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.19 Score=43.47 Aligned_cols=90 Identities=17% Similarity=0.150 Sum_probs=58.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a 84 (327)
+.+|+|-|.||++|+.+.+.|++.|.++.+-+. +.+.... +.- +.-..++.++-+. +|.++-+.
T Consensus 6 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V~-p~~~~~~---------v~G----~~~y~sv~dlp~~~~~Dlavi~v 71 (286)
T TIGR01019 6 DTKVIVQGITGSQGSFHTEQMLAYGTNIVGGVT-PGKGGTT---------VLG----LPVFDSVKEAVEETGANASVIFV 71 (286)
T ss_pred CCcEEEecCCcHHHHHHHHHHHhCCCCEEEEEC-CCCCcce---------ecC----eeccCCHHHHhhccCCCEEEEec
Confidence 568999999999999999999998887444332 2211111 111 1122344444444 79888776
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
+. ..+..+++.|.+.| ++.+|.+|+-
T Consensus 72 pa--------------~~v~~~l~e~~~~G-vk~avIis~G 97 (286)
T TIGR01019 72 PA--------------PFAADAIFEAIDAG-IELIVCITEG 97 (286)
T ss_pred CH--------------HHHHHHHHHHHHCC-CCEEEEECCC
Confidence 53 33456777788888 9888877764
|
ATP citrate lyases appear to form an outgroup. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0025 Score=55.14 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=50.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
..++++|+|+ |..|++++..|.+.|. +|++++|+.++......... ..+...+.. .+++.+.+.++|+||++
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~-----~~~~~~~~~~aDiVIna 199 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA-----GSDLAAALAAADGLVHA 199 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe-----ccchHhhhCCCCEEEEC
Confidence 4578999999 6689999999999996 79999998766443322221 111222211 13345566789999999
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
.+.
T Consensus 200 Tp~ 202 (284)
T PRK12549 200 TPT 202 (284)
T ss_pred CcC
Confidence 543
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.025 Score=50.21 Aligned_cols=112 Identities=18% Similarity=0.113 Sum_probs=63.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCeeEE------eeCCCChhHHHHHhccccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVPM------KFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~~~------~~Dl~~~~~~~~~~~~~d~ 79 (327)
|+|.|+|. |++|.-....|.+.||+|++++.++++-...-..... .++++-+ .+-++-..+..++++++|+
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv 79 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV 79 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence 68999987 9999999999999999999999887652211110000 0111100 0001112345667888999
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+|-+.|.++.... ..++.....+++.....-.-.++|.+=|
T Consensus 80 ~fIavgTP~~~dg----~aDl~~V~ava~~i~~~~~~~~vvV~KS 120 (414)
T COG1004 80 VFIAVGTPPDEDG----SADLSYVEAVAKDIGEILDGKAVVVIKS 120 (414)
T ss_pred EEEEcCCCCCCCC----CccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence 9988876554322 1233444455554444431125555444
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.022 Score=50.03 Aligned_cols=68 Identities=22% Similarity=0.327 Sum_probs=51.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++|.|+|- |.||+.+++.|..-|.+|++.+|..+... .+..+ ...+++.++++++|+|+.+.
T Consensus 134 l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~----------~~~~~----~~~~~l~e~l~~aDvvv~~l 198 (312)
T PRK15469 134 REDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP----------GVQSF----AGREELSAFLSQTRVLINLL 198 (312)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC----------Cceee----cccccHHHHHhcCCEEEECC
Confidence 44689999998 99999999999999999999988654321 11111 13457889999999999887
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
..+
T Consensus 199 Plt 201 (312)
T PRK15469 199 PNT 201 (312)
T ss_pred CCC
Confidence 653
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0061 Score=53.13 Aligned_cols=38 Identities=21% Similarity=0.181 Sum_probs=33.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
+.++|.|+|+ |.+|..++..|+.+|++|++.+|+++..
T Consensus 3 ~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (292)
T PRK07530 3 AIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSADRL 40 (292)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHH
Confidence 3478999999 9999999999999999999999987653
|
|
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0038 Score=55.27 Aligned_cols=77 Identities=19% Similarity=0.210 Sum_probs=48.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCC----CCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDL----GQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
||+|.|+|+ |.+|..++..|++.|++|++++|+++... .+...+.. +.... .....-..+..++++++|+||-
T Consensus 1 mmkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~vi~ 77 (325)
T PRK00094 1 MMKIAVLGA-GSWGTALAIVLARNGHDVTLWARDPEQAA-EINADRENPRYLPGIKL-PDNLRATTDLAEALADADLILV 77 (325)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHH-HHHHcCcccccCCCCcC-CCCeEEeCCHHHHHhCCCEEEE
Confidence 368999998 99999999999999999999999765422 12211100 00000 0001111234456778999998
Q ss_pred cccc
Q 047628 83 LIGR 86 (327)
Q Consensus 83 ~a~~ 86 (327)
|...
T Consensus 78 ~v~~ 81 (325)
T PRK00094 78 AVPS 81 (325)
T ss_pred eCCH
Confidence 8753
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.0069 Score=52.40 Aligned_cols=71 Identities=17% Similarity=0.174 Sum_probs=47.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC----CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG----SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|+.|+|.++|+ |.+|..+++.|+++| ++|++.+|+.++....+.... +++.. ++..++++++|+|
T Consensus 1 ~~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~~---g~~~~-------~~~~e~~~~aDvV 69 (279)
T PRK07679 1 MSIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQKY---GVKGT-------HNKKELLTDANIL 69 (279)
T ss_pred CCCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHhc---CceEe-------CCHHHHHhcCCEE
Confidence 34579999995 999999999999987 789998887543222222110 12221 1233456789999
Q ss_pred EEcccc
Q 047628 81 INLIGR 86 (327)
Q Consensus 81 i~~a~~ 86 (327)
|.+..+
T Consensus 70 ilav~p 75 (279)
T PRK07679 70 FLAMKP 75 (279)
T ss_pred EEEeCH
Confidence 988753
|
|
| >PLN02775 Probable dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.083 Score=45.25 Aligned_cols=98 Identities=20% Similarity=0.255 Sum_probs=58.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh-----cccc-
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM-----AKAN- 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-----~~~d- 78 (327)
+.++|+|.|++|..|+.+++.+++.+.++.+. ++.+........-.+ .++.. ..++++.+++ +.+|
T Consensus 10 ~~i~V~V~Ga~G~MG~~~~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g--~~v~~-----~~~~dl~~~l~~~~~~~~~~ 82 (286)
T PLN02775 10 SAIPIMVNGCTGKMGHAVAEAAVSAGLQLVPVSFTGPAGVGVTVEVCG--VEVRL-----VGPSEREAVLSSVKAEYPNL 82 (286)
T ss_pred CCCeEEEECCCChHHHHHHHHHhcCCCEEEEEeccccccccccceecc--ceeee-----ecCccHHHHHHHhhccCCCE
Confidence 34689999999999999999999988887764 333322110001000 01222 1123333333 2378
Q ss_pred EEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 79 VVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 79 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
++|.+..+ ..+...++.|.++| +. +| +.|++-
T Consensus 83 VvIDFT~P--------------~a~~~~~~~~~~~g-~~-~V-vGTTG~ 114 (286)
T PLN02775 83 IVVDYTLP--------------DAVNDNAELYCKNG-LP-FV-MGTTGG 114 (286)
T ss_pred EEEECCCh--------------HHHHHHHHHHHHCC-CC-EE-EECCCC
Confidence 89988644 45677889999998 64 44 344343
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.034 Score=48.84 Aligned_cols=162 Identities=19% Similarity=0.178 Sum_probs=93.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
..+|+|+|+. -+|...++.+...|.+|++++|++++.. ..++++ --.++.. ++++.+.+.-+.+|++|.+++
T Consensus 167 G~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e-~a~~lG---Ad~~i~~--~~~~~~~~~~~~~d~ii~tv~- 238 (339)
T COG1064 167 GKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLE-LAKKLG---ADHVINS--SDSDALEAVKEIADAIIDTVG- 238 (339)
T ss_pred CCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHH-HHHHhC---CcEEEEc--CCchhhHHhHhhCcEEEECCC-
Confidence 5789999995 7899888888889999999999988743 233333 1222222 245544444344999999987
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCCC
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTED 166 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~~ 166 (327)
.. .....+++++..| +++.++-.......+.+++ ..+. .=..++-+.+. . .
T Consensus 239 ~~-------------~~~~~l~~l~~~G---~~v~vG~~~~~~~~~~~~~-------~li~----~~~~i~GS~~g-~-~ 289 (339)
T COG1064 239 PA-------------TLEPSLKALRRGG---TLVLVGLPGGGPIPLLPAF-------LLIL----KEISIVGSLVG-T-R 289 (339)
T ss_pred hh-------------hHHHHHHHHhcCC---EEEEECCCCCcccCCCCHH-------Hhhh----cCeEEEEEecC-C-H
Confidence 32 2245677777777 7777775541111111221 1111 11122222222 1 2
Q ss_pred hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 167 RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.-+..+.+++.+++.-+... ..+..+|+-+++.++.+..
T Consensus 290 ~d~~e~l~f~~~g~Ikp~i~------e~~~l~~in~A~~~m~~g~ 328 (339)
T COG1064 290 ADLEEALDFAAEGKIKPEIL------ETIPLDEINEAYERMEKGK 328 (339)
T ss_pred HHHHHHHHHHHhCCceeeEE------eeECHHHHHHHHHHHHcCC
Confidence 23455566666665555421 3677788888887776633
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.013 Score=50.28 Aligned_cols=57 Identities=19% Similarity=0.366 Sum_probs=46.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++++|+|.++.+|+.++..|+++|.+|+.+.++. .++.+.++.+|+||.++
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t--------------------------~~l~~~~~~ADIVIsAv 209 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS--------------------------KDMASYLKDADVIVSAV 209 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc--------------------------hhHHHHHhhCCEEEECC
Confidence 5578999999999999999999999999999886532 23566677888888887
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
|..
T Consensus 210 g~p 212 (286)
T PRK14175 210 GKP 212 (286)
T ss_pred CCC
Confidence 753
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.009 Score=52.58 Aligned_cols=36 Identities=19% Similarity=0.152 Sum_probs=32.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
++|.|+|+ |.+|..++..|+..|++|++++++.+..
T Consensus 5 ~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~~~~ 40 (311)
T PRK06130 5 QNLAIIGA-GTMGSGIAALFARKGLQVVLIDVMEGAL 40 (311)
T ss_pred cEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 68999998 9999999999999999999999877553
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.006 Score=53.27 Aligned_cols=67 Identities=21% Similarity=0.289 Sum_probs=47.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|+|.|+|. |.+|..+++.|.+.|++|++.+|++++... +... .+.. .+++.++++++|+||-|...
T Consensus 2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~-~~~~----g~~~-------~~~~~e~~~~~d~vi~~vp~ 68 (296)
T PRK11559 2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNPEAVAE-VIAA----GAET-------ASTAKAVAEQCDVIITMLPN 68 (296)
T ss_pred CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHH-HHHC----CCee-------cCCHHHHHhcCCEEEEeCCC
Confidence 468999996 999999999999999999999988655322 2211 1111 12345566789999988753
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.019 Score=49.95 Aligned_cols=75 Identities=16% Similarity=0.130 Sum_probs=51.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEe-----eCCCChhHHHHHhccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK-----FNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~-----~Dl~~~~~~~~~~~~~d~vi 81 (327)
+|+|.|+|+ |-=|.+|+..|.++|++|+...|+++-........ .+.+++. ..+.-..++.++++++|.|+
T Consensus 1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~---~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv 76 (329)
T COG0240 1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDEEIVAEINETR---ENPKYLPGILLPPNLKATTDLAEALDGADIIV 76 (329)
T ss_pred CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcC---cCccccCCccCCcccccccCHHHHHhcCCEEE
Confidence 478999999 55599999999999999999999865432221111 1222322 22333456788899999998
Q ss_pred Eccc
Q 047628 82 NLIG 85 (327)
Q Consensus 82 ~~a~ 85 (327)
...+
T Consensus 77 ~avP 80 (329)
T COG0240 77 IAVP 80 (329)
T ss_pred EECC
Confidence 6654
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.025 Score=50.41 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=59.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC---hhHHHHHh-ccccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD---DNTIKATM-AKANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~---~~~~~~~~-~~~d~vi~ 82 (327)
.+|||+||+|-+|..+++.+...|. +|+++++++++........+ +..+ .|..+ .+.+.++. .++|+|++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG----a~~v-i~~~~~~~~~~i~~~~~~gvd~vid 230 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG----FDAA-INYKTDNVAERLRELCPEGVDVYFD 230 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC----CcEE-EECCCCCHHHHHHHHCCCCceEEEE
Confidence 6899999999999999988888898 79999887655322111133 2111 12222 12333322 36899999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
+.+.. .....++.++..| +++.++..
T Consensus 231 ~~g~~--------------~~~~~~~~l~~~G---~iv~~G~~ 256 (345)
T cd08293 231 NVGGE--------------ISDTVISQMNENS---HIILCGQI 256 (345)
T ss_pred CCCcH--------------HHHHHHHHhccCC---EEEEEeee
Confidence 88642 1234556666665 77777643
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.00046 Score=55.43 Aligned_cols=35 Identities=29% Similarity=0.349 Sum_probs=30.2
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
+|.|+|+ |.+|+.++..++..|++|++.+++++..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l 35 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEAL 35 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHH
Confidence 6899999 9999999999999999999999987653
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.013 Score=54.32 Aligned_cols=81 Identities=11% Similarity=0.014 Sum_probs=49.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCCchhhhcccC--CCCCeeEE----eeC-CCChhHHHHHhccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMG--DLGQIVPM----KFN-PRDDNTIKATMAKA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~----~~D-l~~~~~~~~~~~~~ 77 (327)
+|+|.|+|. |++|..++..|.+. |++|++++.++++....-.... ..+.+.-+ .+. +.-..++.++++++
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a 79 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA 79 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence 478999987 99999999999988 4889999987665322111000 00011100 000 11112335567789
Q ss_pred cEEEEcccccc
Q 047628 78 NVVINLIGREY 88 (327)
Q Consensus 78 d~vi~~a~~~~ 88 (327)
|++|-|.+.+.
T Consensus 80 dvi~I~V~TP~ 90 (473)
T PLN02353 80 DIVFVSVNTPT 90 (473)
T ss_pred CEEEEEeCCCC
Confidence 99999987544
|
|
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.0045 Score=48.58 Aligned_cols=75 Identities=20% Similarity=0.184 Sum_probs=46.2
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC----CCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG----DLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
||.|+|| |-.|.+++..|..+|++|++..|+++... .+.... ..+++..- ..+.-..++.++++++|+|+-+.
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~-~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~ad~Iiiav 77 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIE-EINETRQNPKYLPGIKLP-ENIKATTDLEEALEDADIIIIAV 77 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHH-HHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-SEEEE-S
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHH-HHHHhCCCCCCCCCcccC-cccccccCHHHHhCcccEEEecc
Confidence 6899999 88899999999999999999999864321 121110 01111110 01111235677889999999776
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
..
T Consensus 78 Ps 79 (157)
T PF01210_consen 78 PS 79 (157)
T ss_dssp -G
T ss_pred cH
Confidence 43
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.01 Score=53.19 Aligned_cols=57 Identities=16% Similarity=0.163 Sum_probs=43.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+++|+|+|.+|.+|..+++.|.+. +++|++++|..+. .....+.++++|+||-|..
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~~-----------------------~~~~~~~v~~aDlVilavP 60 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADPG-----------------------SLDPATLLQRADVLIFSAP 60 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCccc-----------------------cCCHHHHhcCCCEEEEeCC
Confidence 579999999999999999999875 8899998874211 0122445678899998876
Q ss_pred c
Q 047628 86 R 86 (327)
Q Consensus 86 ~ 86 (327)
+
T Consensus 61 v 61 (370)
T PRK08818 61 I 61 (370)
T ss_pred H
Confidence 5
|
|
| >TIGR01142 purT phosphoribosylglycinamide formyltransferase 2 | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.015 Score=52.64 Aligned_cols=68 Identities=19% Similarity=0.323 Sum_probs=52.7
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEcc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLI 84 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a 84 (327)
||+|+|+ |..|..+++.+.+.|++|++++.++......+. + +.+..|..|++.+.++++ ++|+|+...
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~~~a------d-~~~~~~~~d~~~l~~~~~~~~id~v~~~~ 70 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA------H-RSYVINMLDGDALRAVIEREKPDYIVPEI 70 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhhhC------c-eEEEcCCCCHHHHHHHHHHhCCCEEEecc
Confidence 5899997 999999999999999999999987655322211 1 345668889999888877 699998543
|
This enzyme is an alternative to PurN (TIGR00639) |
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.014 Score=54.64 Aligned_cols=73 Identities=19% Similarity=0.212 Sum_probs=50.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh----hhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR----HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
...++|+|+|+ |.+|..+++.|.++|++|+++.+++..... .+... ++++..++-.. ...++|.|
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~----gv~~~~~~~~~------~~~~~D~V 82 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEAL----GATVRLGPGPT------LPEDTDLV 82 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHc----CCEEEECCCcc------ccCCCCEE
Confidence 34578999998 889999999999999999999876532211 12222 36665544221 23568999
Q ss_pred EEcccccc
Q 047628 81 INLIGREY 88 (327)
Q Consensus 81 i~~a~~~~ 88 (327)
|...|...
T Consensus 83 v~s~Gi~~ 90 (480)
T PRK01438 83 VTSPGWRP 90 (480)
T ss_pred EECCCcCC
Confidence 98888754
|
|
| >PLN02948 phosphoribosylaminoimidazole carboxylase | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.019 Score=54.81 Aligned_cols=71 Identities=20% Similarity=0.178 Sum_probs=54.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++++|+|+|+ |.+|+-++.++.+.|++|++++.++......+. -..+.+|..|.+.+.++.+.+|+|...
T Consensus 20 ~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~~apa~~~A-------D~~~v~~~~D~~~l~~~a~~~dvIt~e 90 (577)
T PLN02948 20 VSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLEDCPASSVA-------ARHVVGSFDDRAAVREFAKRCDVLTVE 90 (577)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC-------ceeeeCCCCCHHHHHHHHHHCCEEEEe
Confidence 55789999999 899999999999999999999887654222111 134457888999998888889988543
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0079 Score=48.85 Aligned_cols=28 Identities=29% Similarity=0.504 Sum_probs=26.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVL 35 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~ 35 (327)
|+|.|+||+|.+|+.+++.|.+.|+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 5899999999999999999999999986
|
|
| >PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.023 Score=52.45 Aligned_cols=74 Identities=12% Similarity=0.098 Sum_probs=52.7
Q ss_pred ccCCcEEEEEcC----------------CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh
Q 047628 4 VYSGIIATVFGT----------------TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67 (327)
Q Consensus 4 ~~~~~~ilI~Ga----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~ 67 (327)
++..++||||+| ||..|..|++++..+|.+|+++.-...-.. . .+++.+..+ ..
T Consensus 253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~~-p-------~~v~~i~V~--ta 322 (475)
T PRK13982 253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLAD-P-------QGVKVIHVE--SA 322 (475)
T ss_pred ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCCC-C-------CCceEEEec--CH
Confidence 366789999975 799999999999999999999974332111 0 235555443 45
Q ss_pred hHHHHHhc---cccEEEEccccc
Q 047628 68 NTIKATMA---KANVVINLIGRE 87 (327)
Q Consensus 68 ~~~~~~~~---~~d~vi~~a~~~ 87 (327)
+++.+++. .+|++|++|+..
T Consensus 323 ~eM~~av~~~~~~Di~I~aAAVa 345 (475)
T PRK13982 323 RQMLAAVEAALPADIAIFAAAVA 345 (475)
T ss_pred HHHHHHHHhhCCCCEEEEecccc
Confidence 55555443 279999999875
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.0047 Score=54.25 Aligned_cols=74 Identities=15% Similarity=0.235 Sum_probs=49.0
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
|+.. +.++|+|+|+ |.+|..++..|.+.|+ +|++++|+++... .....+ +... . ..+..+.++++|
T Consensus 1 ~~~~-~~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~-~a~~~g----~~~~---~--~~~~~~~~~~aD 68 (307)
T PRK07502 1 MSAP-LFDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRA-RARELG----LGDR---V--TTSAAEAVKGAD 68 (307)
T ss_pred CCcc-CCcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHH-HHHhCC----CCce---e--cCCHHHHhcCCC
Confidence 4444 3478999995 9999999999999884 8999999865422 222111 1000 0 112345567899
Q ss_pred EEEEcccc
Q 047628 79 VVINLIGR 86 (327)
Q Consensus 79 ~vi~~a~~ 86 (327)
+||.|+..
T Consensus 69 vViiavp~ 76 (307)
T PRK07502 69 LVILCVPV 76 (307)
T ss_pred EEEECCCH
Confidence 99999864
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.0076 Score=56.46 Aligned_cols=76 Identities=21% Similarity=0.253 Sum_probs=53.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+..++|+|+|+ |-+|..+++.|...|. +|+++.|+.++........+ ++... ....+++.+++.++|+||.+
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~---~~~~~dl~~al~~aDVVIsA 336 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEII---YKPLDEMLACAAEADVVFTS 336 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceE---eecHhhHHHHHhcCCEEEEc
Confidence 45689999999 9999999999999996 79999998766433222221 11111 12334566778899999988
Q ss_pred cccc
Q 047628 84 IGRE 87 (327)
Q Consensus 84 a~~~ 87 (327)
.+..
T Consensus 337 T~s~ 340 (519)
T PLN00203 337 TSSE 340 (519)
T ss_pred cCCC
Confidence 7543
|
|
| >TIGR02130 dapB_plant dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.062 Score=45.79 Aligned_cols=98 Identities=19% Similarity=0.277 Sum_probs=59.0
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEE-eeCCCChhHHHHHhcc-cc-EEEEccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM-KFNPRDDNTIKATMAK-AN-VVINLIG 85 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~-~~Dl~~~~~~~~~~~~-~d-~vi~~a~ 85 (327)
+|+|.|++|..|+.+++.+.+.|.++....-+.............. ++..+ .-| ....+..+++. +| ++|.+..
T Consensus 2 ~V~V~Ga~GkMG~~v~~av~~~~~~Lv~~~~~~~~~~~~~~~~~g~-~v~v~~~~~--~~~~l~~~~~~~~d~VvIDFT~ 78 (275)
T TIGR02130 2 QIMVNGCPGKMGKAVAEAADAAGLEIVPTSFGGEEEAENEAEVAGK-EILLHGPSE--REARIGEVFAKYPELICIDYTH 78 (275)
T ss_pred eEEEeCCCChHHHHHHHHHhcCCCEEEeeEccccccccchhhhccc-ceeeecccc--ccccHHHHHhhcCCEEEEECCC
Confidence 6899999999999999999888888887522211111111111100 22222 112 12455666666 88 9998875
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+ ..+...+++|.+++ +. +| +.|.+
T Consensus 79 P--------------~~~~~n~~~~~~~g-v~-~V-iGTTG 102 (275)
T TIGR02130 79 P--------------SAVNDNAAFYGKHG-IP-FV-MGTTG 102 (275)
T ss_pred h--------------HHHHHHHHHHHHCC-CC-EE-EcCCC
Confidence 4 34556789999998 54 44 34434
|
This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome. |
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.014 Score=50.16 Aligned_cols=68 Identities=13% Similarity=0.120 Sum_probs=45.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC----EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS----QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~----~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+++|.++|+ |.+|.++++.|++.|+ +|++.+|+.++........+ ++. . .+ ..++++++|+||-
T Consensus 2 ~~~IgfIG~-G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~~g----~~~--~--~~---~~e~~~~aDiIiL 69 (272)
T PRK12491 2 NKQIGFIGC-GNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDKYG----ITI--T--TN---NNEVANSADILIL 69 (272)
T ss_pred CCeEEEECc-cHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHhcC----cEE--e--CC---cHHHHhhCCEEEE
Confidence 468999996 9999999999999874 69998887655322221121 221 1 12 2344568899998
Q ss_pred cccc
Q 047628 83 LIGR 86 (327)
Q Consensus 83 ~a~~ 86 (327)
|..+
T Consensus 70 avkP 73 (272)
T PRK12491 70 SIKP 73 (272)
T ss_pred EeCh
Confidence 8753
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 141 bits (357), Expect = 5e-41
Identities = 37/230 (16%), Positives = 78/230 (33%), Gaps = 29/230 (12%)
Query: 10 ATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
+ G TG G +++ ++ ++V+ P R + H +L +G +
Sbjct: 8 VLLAGATGLTGEHLLDRILSEPTLAKVIAPAR--KALAEHPRLDNPVGPL---------A 56
Query: 68 NTIKATMAKANVVINLIGREYETRNY--SFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
+ + +G + +F V+ + + A E G ++ +S L
Sbjct: 57 ELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEM-GARHYLVVSAL 115
Query: 126 GASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
GA + S K E+A+ P TI RP+ + G + P
Sbjct: 116 GADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILP- 174
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+ + D+A A+ ++G + E ++ +L +
Sbjct: 175 -----GKYHGIEACDLARALWRLALEEGKG-VRFVE--SDEL---RKLGK 213
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 127 bits (321), Expect = 2e-35
Identities = 42/233 (18%), Positives = 76/233 (32%), Gaps = 24/233 (10%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD-LGQIVPMKFNPR 65
+ G +G GR +++++ + G S+V + R R L + + +
Sbjct: 20 SVFILGASGETGRVLLKEILEQGLFSKVTLIGR------RKLTFDEEAYKNVNQEVVDFE 73
Query: 66 DDNTIKATMAKANVVINLIG-REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
+ + +V +G + F V+ + A +AK G F +S
Sbjct: 74 KLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSS 132
Query: 125 LGASSSSPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTED--RLLNKWAQFVKKFNF 181
GA SS K E V + ++ RP ++ R + F
Sbjct: 133 KGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRK-----F 187
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
F D V VV V A+ + ++ E I H+L +
Sbjct: 188 FGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQMELLE--NKAI---HDLGK 235
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 3e-27
Identities = 42/220 (19%), Positives = 76/220 (34%), Gaps = 27/220 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G G + RY++ +L G + + R + + + G + N +D
Sbjct: 26 VVGANGKVARYLLSELKNKGHEPVAMVR----NEEQGPELRERGASDIVVANLEED--FS 79
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A + V+ G T ++ + A + A++ GI RFI +S +G
Sbjct: 80 HAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKR-GIKRFIMVSSVGTVDPD 138
Query: 132 P-----SRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
K A++ + R L + TI+RP + E +
Sbjct: 139 QGPMNMRHYLVAKRLADDELKRSSLDY-TIVRPGPLSNEEST------------GKVTVS 185
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
S + + DVA + + T GK +E+ D
Sbjct: 186 PHFSEITRSITRHDVAKVIAELVDQQHTI-GKTFEVLNGD 224
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 99 bits (249), Expect = 6e-25
Identities = 36/249 (14%), Positives = 76/249 (30%), Gaps = 40/249 (16%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +G G+ V ++L + + + +G + + +G + + D ++I
Sbjct: 9 VTGASGRTGQIVYKKLKEGSDKFVA--KGLVRSAQGKEKIGGEADVF--IGDITDADSIN 64
Query: 72 ATMAKANVVINLIG-----------------REYETRNYSFEDVNHFMAERIAGIAKEHG 114
+ ++ L E V+ + AK
Sbjct: 65 PAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA- 123
Query: 115 GIMRFIQISCLGASSS-------SPSRVFSTKAAAEEAVLR-ELPWATIMRPAAMIGTED 166
G+ + + +G ++ + K AE+ + P+ TI+R ++ E
Sbjct: 124 GVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPY-TIIRAGGLLDKEG 182
Query: 167 RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI 226
+ + T + V DVA AL + K ++LG
Sbjct: 183 GVRELLVGKDDEL--------LQTDTKTVPRADVAEVCIQALLFEEAK-NKAFDLGSKPE 233
Query: 227 FTVHELAEL 235
T +
Sbjct: 234 GTSTPTKDF 242
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 90.4 bits (225), Expect = 1e-21
Identities = 35/225 (15%), Positives = 78/225 (34%), Gaps = 39/225 (17%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G+TG +G+ +++ L+ Q+ R + ++ V + +
Sbjct: 5 IVGSTGRVGKSLLKSLSTTDYQIYAGAR----KVEQVPQYNNVK-AVHFDVD-WTPEEMA 58
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ + +IN+ G + S V+ + A ++ A++ + RFI +S + +
Sbjct: 59 KQLHGMDAIINVSG----SGGKSLLKVDLYGAVKLMQAAEKA-EVKRFILLSTIFSLQPE 113
Query: 132 P---------SRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+ K A+ + +E L + TI++P A+ E
Sbjct: 114 KWIGAGFDALKDYYIAKHFADLYLTKETNLDY-TIIQPGALTEEEAT------------- 159
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
L + DVA + + D + GK+ +
Sbjct: 160 --GLIDINDEVSASNTIGDVADTIKELVMTDHSI-GKVISMHNGK 201
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 3e-20
Identities = 47/347 (13%), Positives = 99/347 (28%), Gaps = 60/347 (17%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL-----MGDLGQIVPMKFNPRD 66
V G TG LG + + + G +++ R R L + ++ D
Sbjct: 18 VLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEM----------LD 67
Query: 67 DNTIKATMAKANVVINLIG--REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124
++ + + VI G R + + R + +
Sbjct: 68 HAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA-RVPRILYVGS 126
Query: 125 LGASSSSPSRVFS------------------TKAAAEEAVLRE----LPWATIMRPAAMI 162
A P + K A +E + LP I P ++
Sbjct: 127 AYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLP-VVIGIPGMVL 185
Query: 163 GTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222
G D + + + + + + + + AL+ G+ Y L
Sbjct: 186 GELDIGPT-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRI--GERYLLT 242
Query: 223 GPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDE 282
G ++ + +L + + + P + +A+A+A L + + L +
Sbjct: 243 GHNL-EMADLTRRIAE-LLGQPAPQPMSMAMARALAT----LGRLRYRVSGQLPLLDETA 296
Query: 283 INAYTSDTIVSDNALTFQDLGIVPHKLKGYPTE-----YLIWYRKGG 324
I + D ++LG + + W+R G
Sbjct: 297 IEVMAGGQFL-DGRKAREELGFFST----TALDDTLLRAIDWFRDNG 338
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 2e-19
Identities = 38/211 (18%), Positives = 63/211 (29%), Gaps = 33/211 (15%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLG-QIVPMKFNPRDDNTI 70
+FG TG G + Q + G +V V R D L G +V + +
Sbjct: 8 IFGATGQTGLTTLAQAVQAGYEVTVLVR----DSSRLPSEGPRPAHVV--VGDVLQAADV 61
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
T+A + VI L+G + S V A I K H G+ + + +
Sbjct: 62 DKTVAGQDAVIVLLG---TRNDLSPTTVMSEGARNIVAAMKAH-GVDKVVACTSAFLLWD 117
Query: 131 SPS------RVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFF 182
V + LRE L + + P + +
Sbjct: 118 PTKVPPRLQAVTDDHIRMHKV-LRESGLKY-VAVMPPHIGDQPLT------------GAY 163
Query: 183 PLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213
+ DG + + D+ + L D
Sbjct: 164 TVTLDGRGPSRVISKHDLGHFMLRCLTTDEY 194
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 77.1 bits (190), Expect = 1e-16
Identities = 36/228 (15%), Positives = 66/228 (28%), Gaps = 44/228 (19%)
Query: 12 VFGTTGFLGRYVVQQLA-KMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G G + R+V+ QLA K + + R P + + + + +
Sbjct: 28 ILGAGGQIARHVINQLADKQTIKQTLFAR----QPAKIHKPYPTN-SQIIMGDVLNHAAL 82
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
K M ++V + E A + K + R I + LG
Sbjct: 83 KQAMQGQDIVYANLTGEDLDI----------QANSVIAAMKACD-VKRLIFVLSLGIYDE 131
Query: 131 SP-----------SRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVK 177
P A +A + L + TI+RPA + +
Sbjct: 132 VPGKFVEWNNAVIGEPLKPFRRAADA-IEASGLEY-TILRPAWLTD------EDIIDYE- 182
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225
+ + V VAA +T + +G+ + P
Sbjct: 183 -----LTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG 225
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 76.1 bits (187), Expect = 6e-16
Identities = 49/262 (18%), Positives = 89/262 (33%), Gaps = 32/262 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQV--LVPFRGCEDDPRHLKLMGDLG----QIVPMKFNPR 65
+ G TG++GR+V + +G LV + +L+ IV +
Sbjct: 9 LIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSID-- 66
Query: 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125
D ++ + +VVI+ +G ++ A + G ++ S
Sbjct: 67 DHASLVEAVKNVDVVISTVGS------------LQIESQVNIIKAIKEVGTVKRFFPSEF 114
Query: 126 GASSSSPSR------VFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVK 177
G + VF KA A + +P+ T + G R L +
Sbjct: 115 GNDVDNVHAVEPAKSVFEVKAKVRRA-IEAEGIPY-TYVSSNCFAGYFLRSLAQAGLTAP 172
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTVHELAELM 236
+ + GDG+ R+ V D+ A+ D T + K L P + +++EL L
Sbjct: 173 PRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT-LNKTLYLRLPANTLSLNELVALW 231
Query: 237 YDTIREYPHYVKVPFPVAKAVA 258
I + VP +
Sbjct: 232 EKKIDKTLEKAYVPEEEVLKLI 253
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 73.6 bits (181), Expect = 4e-15
Identities = 51/259 (19%), Positives = 92/259 (35%), Gaps = 23/259 (8%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDN 68
VFG TG G V + L + G+ +V V R + L+L G ++ + D
Sbjct: 9 VVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG----AEVVQGDQDDQV 64
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
++ + A ++ +E+ + E + +A +A+ G + +
Sbjct: 65 IMELALNGAYATF-IVTNYWESCSQEQEV---KQGKLLADLARRLG-LHYVVYSGLENIK 119
Query: 129 SSSPSRV----FSTKAAAEEAVLRE--LPWATIMRPAA-MIGTEDRLLNKWAQFVKKFNF 181
+ R+ F K EE R+ +P T +R L + A K +
Sbjct: 120 KLTAGRLAAAHFDGKGEVEEY-FRDIGVPM-TSVRLPCYFENLLSHFLPQKAPDGKSYLL 177
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
GD + + V D+ V + LK +G+ L T E A L+ R
Sbjct: 178 SLPTGD--VPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLTKHTR 234
Query: 242 EYPHYVKVPFPVAKAVAMP 260
+ H K+ + + P
Sbjct: 235 KVVHDAKMTPEDYEKLGFP 253
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 72.6 bits (178), Expect = 1e-14
Identities = 46/254 (18%), Positives = 80/254 (31%), Gaps = 24/254 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TG++G ++V+ K+G V R L LG I+ +K + +
Sbjct: 16 IFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAII-VKGELDEHEKLV 74
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
M K +VVI+ + +I K G I RF+ S G
Sbjct: 75 ELMKKVDVVISALAFP-----------QILDQFKILEAIKVAGNIKRFL-PSDFGVEEDR 122
Query: 132 PSRV------FSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL 184
+ + K A+ +P+ T + +N + + +
Sbjct: 123 INALPPFEALIERKRMIRRAIEEANIPY-TYVSANCFA---SYFINYLLRPYDPKDEITV 178
Query: 185 FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244
+G G + Y D+ D + +I T EL I +
Sbjct: 179 YGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGKKF 238
Query: 245 HYVKVPFPVAKAVA 258
+ VP A+
Sbjct: 239 KKIHVPEEEIVALT 252
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 72.3 bits (177), Expect = 1e-14
Identities = 39/253 (15%), Positives = 89/253 (35%), Gaps = 25/253 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMGDLG----QIVPMKFNPRD 66
+ G TG++G+ +V +G V FR + ++++ +++ + D
Sbjct: 9 IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLD--D 66
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI------ 120
+ + + +VVI+ + + ++ KE G I RF+
Sbjct: 67 HQRLVDALKQVDVVISALAG-------GVLSHHILEQLKLVEAIKEAGNIKRFLPSEFGM 119
Query: 121 QISCLGASSSSPSRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWA-QFVKK 178
+ + S F K A+ +P+ T + G L + +
Sbjct: 120 DPDIMEHALQPGSITFIDKRKVRRAIEAASIPY-TYVSSNMFAGYFAGSLAQLDGHMMPP 178
Query: 179 FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTVHELAELMY 237
+ ++GDG+ + V DV ++ D T + K + P +I + E+ ++
Sbjct: 179 RDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT-LNKTMYIRPPMNILSQKEVIQIWE 237
Query: 238 DTIREYPHYVKVP 250
+ + +
Sbjct: 238 RLSEQNLDKIYIS 250
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-14
Identities = 46/233 (19%), Positives = 84/233 (36%), Gaps = 32/233 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
V G TG LG V+Q L K SQ++ R + + D G + + +
Sbjct: 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVR----NVEKASTLADQG-VEVRHGDYNQPES 59
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGI--AKEHGGIMRFIQISCLGA 127
++ A + ++ I + D + + + A++ G + A
Sbjct: 60 LQKAFAGVSKLL-FI-------SGPHYDNTLLIVQHANVVKAARDAG-VKHIAYTGYAFA 110
Query: 128 SSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAA-MIGTEDRLLNKWAQFVKKFNFFPL 184
S + A E A +R +P+ T +R A D +N+ + +
Sbjct: 111 EES-IIPLAHVHLATEYA-IRTTNIPY-TFLRNALYT----DFFVNEGLRASTESGAIVT 163
Query: 185 -FGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
G G + V ++A A L ++G K Y L +T ELA+++
Sbjct: 164 NAGSG--IVNSVTRNELALAAATVLTEEGHE-NKTYNLVSNQPWTFDELAQIL 213
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 72.0 bits (176), Expect = 2e-14
Identities = 41/249 (16%), Positives = 84/249 (33%), Gaps = 22/249 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLG----QIVPMKFNPRDD 67
+ G TGF+G++V + R P K+ L IV N ++
Sbjct: 15 IAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEA 74
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ-ISCLG 126
+ ++V++ +G E + + K G I RF+
Sbjct: 75 MEKILKEHEIDIVVSTVGGE-----------SILDQIALVKAMKAVGTIKRFLPSEFGHD 123
Query: 127 ASSSSPS----RVFSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF 181
+ + P ++ K + V +P+ T + ++ ++ + +F
Sbjct: 124 VNRADPVEPGLNMYREKRRVRQLVEESGIPF-TYICCNSIASWPYYNNIHPSEVLPPTDF 182
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
F ++GDG+ + V D+ + D T ++ + ++ELA + I
Sbjct: 183 FQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIG 242
Query: 242 EYPHYVKVP 250
V V
Sbjct: 243 RTLPRVTVT 251
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 1e-13
Identities = 53/231 (22%), Positives = 91/231 (39%), Gaps = 31/231 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
+ G TG LG YV++ L K SQ++ R +P + + G I + + D+
Sbjct: 4 ITGATGQLGHYVIESLMKTVPASQIVAIVR----NPAKAQALAAQG-ITVRQADYGDEAA 58
Query: 70 IKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGI--AKEHGGIMRFIQISCLGA 127
+ + + ++ LI S +V + I AK G + S L A
Sbjct: 59 LTSALQGVEKLL-LI---------SSSEVGQRAPQHRNVINAAKAAG-VKFIAYTSLLHA 107
Query: 128 SSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLF 185
+S P + E+ L + + + T++R + L ++ F
Sbjct: 108 DTS-PLGLADEHIETEKM-LADSGIVY-TLLRNGWYS---ENYLASAPAALEHGVFIGAA 161
Query: 186 GDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
GDG +I D AAA + + G GK+YEL G +T+ +LA +
Sbjct: 162 GDG--KIASATRADYAAAAARVISEAGHE-GKVYELAGDSAWTLTQLAAEL 209
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 69.5 bits (170), Expect = 1e-13
Identities = 49/238 (20%), Positives = 86/238 (36%), Gaps = 27/238 (11%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLV---PFRGCEDDPRHLKLMGDLGQ--IVPMKFNPRD 66
+ G TG +GR++V K G+ + +L+ + ++ ++ + D
Sbjct: 7 ILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDIND 66
Query: 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126
T+ + + ++VI GR ED +I KE G + +F S G
Sbjct: 67 HETLVKAIKQVDIVICAAGRL------LIED-----QVKIIKAIKEAGNVKKFF-PSEFG 114
Query: 127 ASSSSPSRV------FSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKF 179
V F KA+ + E +P+ T + A G R L +
Sbjct: 115 LDVDRHDAVEPVRQVFEEKASIRRVIEAEGVPY-TYLCCHAFTGYFLRNLAQLDATDPPR 173
Query: 180 NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTVHELAELM 236
+ + GDG+ + V DV A D T + K + P + T +E+ L
Sbjct: 174 DKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT-LNKAVHIRLPKNYLTQNEVIALW 230
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 2e-13
Identities = 46/242 (19%), Positives = 80/242 (33%), Gaps = 37/242 (15%)
Query: 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVP 59
M + + G TG LG ++ Q + R + + +
Sbjct: 1 MNIM-------LTGATGHLGTHITNQAIANHIDHFHIGVR----NVEKVPDDWRGK-VSV 48
Query: 60 MKFNPRDDNTIKATMAKANVV--INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM 117
+ + + ++ + V I I R E++ AK+ G+
Sbjct: 49 RQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIPEVENL--------VYAAKQS-GVA 99
Query: 118 RFIQISCLGASSSSPSRVFSTKAAAEEAVLRE--LPWATIMRPAA-MIGTEDRLLNKWAQ 174
I I ++P + A L + + T +R A M D L +
Sbjct: 100 HIIFIGYYADQHNNPFHMSPYFGYASRL-LSTSGIDY-TYVRMAMYM----DPLKPYLPE 153
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
+ GDG RI + D+A V A +K+ T GK Y L G + + ELA
Sbjct: 154 LMNMHKLIYPAGDG--RINYITRNDIARGVIAIIKNPDTW-GKRYLLSGYS-YDMKELAA 209
Query: 235 LM 236
++
Sbjct: 210 IL 211
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 66.5 bits (162), Expect = 1e-12
Identities = 37/258 (14%), Positives = 82/258 (31%), Gaps = 24/258 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGC--EDDPRHLKLMGDLGQ--IVPMKFNPRDD 67
++G TG++G+++V+ + R + P ++L + + ++ +
Sbjct: 9 IYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH 68
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + + + ++VI+ + + I K G I RF+ S G
Sbjct: 69 EKMVSVLKQVDIVISALPFPMIS-----------SQIHIINAIKAAGNIKRFLP-SDFGC 116
Query: 128 SSSSPSRV------FSTKAAAEEAVLRE-LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180
+ K A+ LP+ T + L + + +
Sbjct: 117 EEDRIKPLPPFESVLEKKRIIRRAIEAAALPY-TYVSANCFGAYFVNYLLHPSPHPNRND 175
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
++G G T+ Y D+A D + +I + +EL L
Sbjct: 176 DIVIYGTGETKFVLNYEEDIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKS 235
Query: 241 REYPHYVKVPFPVAKAVA 258
V +P ++
Sbjct: 236 GLSFKKVHMPDEQLVRLS 253
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 63.6 bits (155), Expect = 5e-12
Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 35/228 (15%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +GF+G ++ + G +V R P +K+ + ++ K + + +
Sbjct: 9 LIGASGFVGSALLNEALNRGFEVTAVVR----HPEKIKIENEHLKVK--KADVSSLDEVC 62
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A+ VI+ N D + I K+ G+ RF+ + G+ +
Sbjct: 63 EVCKGADAVISAFN--PGWNNPDIYDETIKVYLTIIDGVKKA-GVNRFLMVGGAGSLFIA 119
Query: 132 PSRVF------------STKAAAEEAVLR-----ELPWATIMRPAAMIGTEDRLLNKWAQ 174
P KA E + E+ W PAA + + +
Sbjct: 120 PGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDW-VFFSPAADMR--PGVRTGRYR 176
Query: 175 FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222
K + G+ + V D AAA+ L+ + + +G
Sbjct: 177 LGKDDMIVDIVGNS-----HISVEDYAAAMIDELEHPKHH-QERFTIG 218
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 3e-11
Identities = 31/232 (13%), Positives = 70/232 (30%), Gaps = 42/232 (18%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TG G ++++ G +V R + + I+ +
Sbjct: 5 IIGATGRAGSRILEEAKNRGHEVTAIVR----NAGKITQTHKDINILQK----DIFDLTL 56
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA---- 127
+ ++ NVV++ G + + + + + + R + + +
Sbjct: 57 SDLSDQNVVVDAYG-----ISPDEAEKHVTSLDHLISVLNGT-VSPRLLVVGGAASLQID 110
Query: 128 --------SSSSPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKW 172
S + A A+ L W T + P+AM +R
Sbjct: 111 EDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSW-TYISPSAMFEPGERT---- 165
Query: 173 AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP 224
+ + DG++ I + D A AV ++ + + + G
Sbjct: 166 GDYQIGKDHLLFGSDGNSFI---SMEDYAIAVLDEIERPNHL-NEHFTVAGK 213
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 60.0 bits (145), Expect = 8e-11
Identities = 28/238 (11%), Positives = 62/238 (26%), Gaps = 40/238 (16%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G TG G +V + + G +VL R DP+ D +
Sbjct: 5 VLGATGRAGSAIVAEARRRGHEVLAVVR----DPQKA---ADRLGATVATLVKEPLVLTE 57
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A + + V++ + + ++ A + + + + + +
Sbjct: 58 ADLDSVDAVVDALSVP-WGSGRGYLHLDF--ATHLVSLLRNS-DTLAVFILGSASLAMPG 113
Query: 132 PSRVF-----------STKAAAEEAVLR--------ELPWATIMRPAAMIGTEDRLLNKW 172
A + W + P+ +
Sbjct: 114 ADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNW-IGISPSEAFPSGPA----- 167
Query: 173 AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230
+V + + DG + I ++A A+ L+ + D+ H
Sbjct: 168 TSYVAGKDTLLVGEDGQSHI---TTGNMALAILDQLEHPTAI-RDRIVVRDADLEHHH 221
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 60.6 bits (147), Expect = 1e-10
Identities = 39/260 (15%), Positives = 74/260 (28%), Gaps = 30/260 (11%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLG-QIVPMKFNPRDD-N 68
V G TG G +++ A +G V +L + + ++
Sbjct: 9 AVVGATGRQGASLIRVAAAVGHHVRAQVHS-LKGLIAEELQAIPNVTLF--QGPLLNNVP 65
Query: 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+ A++ + + + +A AK G I +I S S
Sbjct: 66 LMDTLFEGAHLAFINTTSQAGDE--------IAIGKDLADAAKRAGTIQHYIYSSMPDHS 117
Query: 129 SSSPSRV---FSTKAAAEEAVLRE--LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN--- 180
P ++ K E +R+ LP T + + + F +
Sbjct: 118 LYGPWPAVPMWAPKFTVENY-VRQLGLPS-TFVYAGIYN--NNFTSLPYPLFQMELMPDG 173
Query: 181 --FFPLFGDGSTRIQPVYVV-DVAAAVTAALKDD-GTSMGKIYELGGPDIFTVHELAELM 236
+ D + + DV A+ KD G L + + ++
Sbjct: 174 TFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAF 232
Query: 237 YDTIREYPHYVKVPFPVAKA 256
+ YV+VP K
Sbjct: 233 SRALNRRVTYVQVPKVEIKV 252
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 56.5 bits (136), Expect = 4e-09
Identities = 39/287 (13%), Positives = 83/287 (28%), Gaps = 47/287 (16%)
Query: 17 GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK 76
GF+G+ + L + + +++ + K
Sbjct: 10 GFVGKNLKADLTSTTDHHIFEVH-----------------------RQTKEEELESALLK 46
Query: 77 ANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVF 136
A+ +++L G + F N + + I + I + SSS +
Sbjct: 47 ADFIVHLAGVNRPEHDKEFSLGNVSYLDHVLDILTRN-TKKPAILL-----SSSIQATQD 100
Query: 137 S----TKAAAEEAVLR-----ELPWATIMRPAAMIGTEDRLLNKWAQFVKKF------NF 181
+ +K E+ + I R + G + + F N
Sbjct: 101 NPYGESKLQGEQLLREYAEEYGNTV-YIYRWPNLFG--KWCKPNYNSVIATFCYKIARNE 157
Query: 182 FPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241
D + + YV D+ A + A++ T + + T+ E+ +L+Y +
Sbjct: 158 EIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQ 217
Query: 242 EYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288
+ L P L N+D+ ++T
Sbjct: 218 SRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTE 264
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 51.9 bits (124), Expect = 4e-08
Identities = 27/230 (11%), Positives = 57/230 (24%), Gaps = 43/230 (18%)
Query: 12 VFGTTGFLGRYVVQQL-AKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
+ G G + + + L + + R + + + ++ + + ++ +
Sbjct: 10 ILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVI--EGSFQNPGXL 67
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
+ + A VV I I R I +S G S
Sbjct: 68 EQAVTNAEVVFVGAMESGSD------------MASIVKALSR-XNIRRVIGVSMAGLSGE 114
Query: 131 SP------------SRVFSTKAAAEEAV-LRELPWATIMRPAAMIGTEDRLLNKWAQFVK 177
P + A + L + TI+R + + +
Sbjct: 115 FPVALEKWTFDNLPISYVQGERQARNVLRESNLNY-TILRLTWLYNDPE-----XTDYEL 168
Query: 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK--DDGTSMGKIYELGGPD 225
+R V A+ L D+ +G P
Sbjct: 169 IPEGAQFNDAQVSRE------AVVKAIFDILHAADETPFHRTSIGVGEPG 212
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 44.0 bits (103), Expect = 4e-05
Identities = 31/278 (11%), Positives = 74/278 (26%), Gaps = 60/278 (21%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLV---------PFRGCEDDPRHLKLMGDLGQIVP 59
+A + G TG +G + + L + +D + D+
Sbjct: 3 VALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPINYVQCDI----- 57
Query: 60 MKFNPRDDNTIKATMAKANVVINLIGREYETRNYSFE--DVNHFMAERIAGIAKEHGGIM 117
D + +A ++ V ++ + R+ E + N M + + +
Sbjct: 58 -----SDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLDAVIPNCPNL 112
Query: 118 RFIQISCLGASSSSPSRVF--------------------STKAAAEEAVLRE------LP 151
+ I + P + + E+ +L E L
Sbjct: 113 KHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLT 172
Query: 152 WATIMRPAAMIGTEDRLLNKWAQFVKKFNF--------FPLFGDGST---RIQPVYVVDV 200
W ++ RP + G + + + G + +
Sbjct: 173 W-SVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLI 231
Query: 201 AAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYD 238
A A D + + + D+F +++ +
Sbjct: 232 AEHHIWAAVDPYAK-NEAFNVSNGDVFKWKHFWKVLAE 268
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 2e-04
Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
Query: 183 PLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELM 236
PL G TR ++V DVA + A D G +Y + ++ +LA +
Sbjct: 249 PLENGGVATR-DFIFVEDVANGLIACAADGTP--GGVYNIASGKETSIADLATKI 300
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 41.4 bits (98), Expect = 2e-04
Identities = 38/265 (14%), Positives = 77/265 (29%), Gaps = 82/265 (30%)
Query: 17 GFLGRYVVQQLAKMGSQVLVPFRGCEDD-----PRHLKLMGDLGQIVPMKFNPRDDNTIK 71
GFLG+YVV+ + G+ ++ + ++ I
Sbjct: 12 GFLGQYVVESIKNDGNTPII------LTRSIGNKAINDYEYRVSDY-------TLEDLIN 58
Query: 72 ATMAKANVVINL---IGREYETRNYSFED--VNHFMAERIAGIAKEHGGIMRFIQISCLG 126
+ + V++L G + + N + + + E+ I +
Sbjct: 59 Q-LNDVDAVVHLAATRGSQG-----KISEFHDNEILTQNLYDACYENN-ISNIVY----- 106
Query: 127 ASSSS--------------PSRVFS----TKAAAEEAV-----LRELPWATI-------- 155
AS+ S +K A E + L +
Sbjct: 107 ASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGF 166
Query: 156 -MRPAAMIGTEDRLLNKWAQFVKKFNF---FPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211
+ MI +F ++ L + + + +Y D A +V ALK +
Sbjct: 167 NEKNNYMI----------NRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE 216
Query: 212 GTSMGKIYELGGPDIFTVHELAELM 236
+ +G D T +E+A +
Sbjct: 217 KV--SGTFNIGSGDALTNYEVANTI 239
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287 | Back alignment and structure |
|---|
Score = 39.9 bits (93), Expect = 6e-04
Identities = 15/77 (19%), Positives = 27/77 (35%)
Query: 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
G A V TG +G LA G++V++ R + + ++
Sbjct: 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETA 177
Query: 66 DDNTIKATMAKANVVIN 82
DD + + A+ V
Sbjct: 178 DDASRAEAVKGAHFVFT 194
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 327 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 100.0 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 100.0 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 100.0 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 100.0 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 100.0 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 100.0 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 100.0 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 100.0 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 100.0 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 100.0 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 100.0 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 100.0 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.97 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.97 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.97 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.97 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.97 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.97 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.97 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.96 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.96 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.94 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.94 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.94 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.93 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.93 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.92 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.92 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.92 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.92 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.92 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.91 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.91 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.91 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.91 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.91 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.91 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.91 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.91 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.91 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.91 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.91 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.91 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.91 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.91 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.9 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.9 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.9 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.9 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.9 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.9 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.9 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.9 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.9 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.9 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.9 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.9 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.9 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.9 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.89 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.89 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.89 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.89 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.89 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.89 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.89 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.89 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.89 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.89 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.89 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.89 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.89 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.89 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.89 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.89 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.89 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.89 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.89 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.88 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.88 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.88 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.88 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.88 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.88 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.88 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.88 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.88 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.88 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.88 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.88 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.88 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.88 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.88 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.88 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.88 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.88 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.88 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.88 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.88 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.88 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.88 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.88 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.87 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.87 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.87 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.87 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.87 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.87 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.87 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.87 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.87 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.87 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.87 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.87 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.87 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.87 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.87 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.87 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.87 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.87 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.87 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.87 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.87 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.87 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.87 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.87 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.87 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.87 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.87 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.87 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.87 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.87 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.87 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.87 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.87 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.87 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.87 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.87 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.87 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.86 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.86 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.86 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.86 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.86 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.86 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.86 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.86 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.86 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.86 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.86 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.86 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.86 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.86 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.86 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.86 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.86 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.86 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.86 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.86 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.85 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.85 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.85 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.85 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.85 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.85 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.85 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.85 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.85 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.85 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.85 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.85 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.85 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.85 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.85 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.85 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.84 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.84 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.84 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.84 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.84 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.84 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.84 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.84 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.84 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.84 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.84 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.84 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.84 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.84 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.84 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.84 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.84 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.84 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.83 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.83 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.83 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.83 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.82 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.82 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.82 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.81 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.81 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.81 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.81 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.81 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.81 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.8 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.8 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.8 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.8 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.8 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.8 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.8 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.78 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.78 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.78 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.78 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.76 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.76 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.76 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.75 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.75 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.75 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.75 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.74 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.73 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.73 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.7 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.7 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.69 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.63 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.61 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.61 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.6 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.58 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.48 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.46 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.42 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.41 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.4 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.38 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.37 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.34 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.28 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.27 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.24 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.13 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.0 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.96 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 98.96 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.95 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.91 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.91 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.88 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.87 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.85 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.85 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.84 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.81 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.72 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.67 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.66 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.66 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.59 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.52 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.51 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.46 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.42 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.4 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.36 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.29 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.24 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 98.2 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.17 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 98.17 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 98.15 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 98.13 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 98.1 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 98.09 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 98.09 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.05 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 98.04 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 98.02 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 98.02 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.99 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.98 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.93 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.92 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.91 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 97.89 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.88 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.88 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.84 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.82 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.79 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.76 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.75 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.75 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.72 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.71 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.7 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.69 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.69 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.68 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.68 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.66 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.66 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.66 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.64 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.64 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.63 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.63 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.61 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.6 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 97.58 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.57 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.56 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.56 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.55 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.53 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.52 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 97.51 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.5 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.49 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.48 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.48 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.48 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.47 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.47 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.47 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.47 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.46 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.46 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.44 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.42 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.41 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.41 | |
| 3k5i_A | 403 | Phosphoribosyl-aminoimidazole carboxylase; purine | 97.41 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 97.4 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.4 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 97.39 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 97.38 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.37 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.37 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.37 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.36 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.35 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.35 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.35 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.35 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.34 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.32 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.31 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 97.31 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.29 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.29 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.28 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 97.28 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.27 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.27 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.26 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.25 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.25 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.24 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.24 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.24 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.23 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.22 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.2 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.2 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.18 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.17 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.17 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.16 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.16 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.16 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.15 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 97.15 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.15 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.14 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 97.14 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.12 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.1 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.09 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.08 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.06 | |
| 3q2o_A | 389 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 97.05 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.05 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.05 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.04 | |
| 4gx0_A | 565 | TRKA domain protein; membrane protein, ION channel | 97.04 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 97.02 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.01 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.01 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 96.99 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.99 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 96.98 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 96.97 | |
| 3ax6_A | 380 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 96.97 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.96 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.96 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 96.94 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 96.93 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 96.93 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.92 | |
| 1iuk_A | 140 | Hypothetical protein TT1466; structural genomics, | 96.91 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 96.91 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 96.91 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.9 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 96.9 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 96.9 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 96.89 | |
| 1kjq_A | 391 | GART 2, phosphoribosylglycinamide formyltransferas | 96.88 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.88 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 96.88 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.87 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 96.87 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 96.87 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 96.86 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 96.86 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 96.86 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 96.85 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 96.85 | |
| 2dc1_A | 236 | L-aspartate dehydrogenase; NAD, oxidoreductase; HE | 96.84 | |
| 1edz_A | 320 | 5,10-methylenetetrahydrofolate dehydrogenase; nucl | 96.84 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 96.81 | |
| 4ffl_A | 363 | PYLC; amino acid, biosynthesis of pyrrolysine, iso | 96.81 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.8 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 96.8 | |
| 3e5r_O | 337 | PP38, glyceraldehyde-3-phosphate dehydrogenase, cy | 96.8 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 96.79 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-44 Score=315.78 Aligned_cols=276 Identities=16% Similarity=0.165 Sum_probs=232.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|+|||||||||||++|+++|+++|++|++++|++.. .. + .+++++.+|++ ++++.++++++|+|||||+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~-~------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~ 72 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGN-KA-I------NDYEYRVSDYT-LEDLINQLNDVDAVVHLAAT 72 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------CCEEEECCCC-HHHHHHHTTTCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCc-cc-C------CceEEEEcccc-HHHHHHhhcCCCEEEEcccc
Confidence 5899999999999999999999999999999999433 22 2 25899999999 99999999999999999998
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHHh----h
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVLR----E 149 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~~----~ 149 (327)
.....+...+++|+.++.+++++|++.+ +++|||+||.+++... .+.|+.+|..+|++++. .
T Consensus 73 ~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~ 151 (311)
T 3m2p_A 73 RGSQGKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKK 151 (311)
T ss_dssp CCSSSCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc
Confidence 6655677888999999999999999998 9999999998876432 17899999999999987 4
Q ss_pred CCCeEEEecCeeecCCCh---hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcc
Q 047628 150 LPWATIMRPAAMIGTEDR---LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI 226 (327)
Q Consensus 150 ~~~~~i~r~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~ 226 (327)
+++++++||+.+||++.. ++..+...+..+..+.++++++..++++|++|+|++++.+++++.. +++||+++++.
T Consensus 152 g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~--~~~~~i~~~~~ 229 (311)
T 3m2p_A 152 GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKV--SGTFNIGSGDA 229 (311)
T ss_dssp CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTC--CEEEEECCSCE
T ss_pred CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCC--CCeEEeCCCCc
Confidence 699999999999999764 6778888888888888888999999999999999999999998764 78999999999
Q ss_pred ccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCcc
Q 047628 227 FTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306 (327)
Q Consensus 227 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p 306 (327)
+|+.|+++.+++.+|.+..+...+.+ . +. ......++. +++++.|||+|
T Consensus 230 ~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~-----~~-----------~~~~~~~d~-~k~~~~lG~~p 278 (311)
T 3m2p_A 230 LTNYEVANTINNAFGNKDNLLVKNPN--------------A-----NE-----------GIHSSYMDS-SKAKELLDFST 278 (311)
T ss_dssp ECHHHHHHHHHHHTTCTTCEEECSSS--------------B-----CC-----------SCCCBCBCC-HHHHHHSCCCC
T ss_pred ccHHHHHHHHHHHhCCCCcceecCCC--------------C-----CC-----------CcCceecCH-HHHHHHhCCCc
Confidence 99999999999999988776655521 0 00 012344555 58888899999
Q ss_pred c-cccCccHHHHHHHhhCCC
Q 047628 307 H-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 307 ~-~~~~~l~~~~~~~~~~g~ 325 (327)
+ +++++++++++|+++.+.
T Consensus 279 ~~~~~~~l~~~~~~~~~~~~ 298 (311)
T 3m2p_A 279 DYNFATAVEEIHLLMRGLDD 298 (311)
T ss_dssp SCCHHHHHHHHHHHHCC---
T ss_pred ccCHHHHHHHHHHHHHhccc
Confidence 9 999999999999998764
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-45 Score=325.81 Aligned_cols=291 Identities=18% Similarity=0.152 Sum_probs=233.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCC------CCeeEEeeCCCChhHHHHHhccc
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDL------GQIVPMKFNPRDDNTIKATMAKA 77 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~------~~v~~~~~Dl~~~~~~~~~~~~~ 77 (327)
.+++|+|||||||||||++|+++|+++|++|++++|+.......+...... ++++++.+|++|++++.++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 355789999999999999999999999999999999877544333221110 36899999999999999999999
Q ss_pred cEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHH
Q 047628 78 NVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~ 140 (327)
|+|||||+.... ..+...+++|+.++.+++++|++.+ +++|||+||.+++... .+.|+.+|.
T Consensus 102 d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~ 180 (351)
T 3ruf_A 102 DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKY 180 (351)
T ss_dssp SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHH
T ss_pred CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHH
Confidence 999999987432 3345688999999999999999998 9999999998876432 178999999
Q ss_pred HHHHHHHhh----CCCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 141 AAEEAVLRE----LPWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 141 ~~E~~~~~~----~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+|++++.+ +++++++||+.+||++. .++..+...+..+..+.++|++++.++++|++|+|++++.++.
T Consensus 181 ~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~ 260 (351)
T 3ruf_A 181 VNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSAL 260 (351)
T ss_dssp HHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 999998753 79999999999999964 4567778878888888888999999999999999999999998
Q ss_pred cC-CCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhc
Q 047628 210 DD-GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288 (327)
Q Consensus 210 ~~-~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
.+ .. .+++||+++++.+|+.|+++.+++.+|.+......+. ..... .+. ...
T Consensus 261 ~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------~~~~~-~~~-----------~~~ 313 (351)
T 3ruf_A 261 AKDSA-KDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSI--------------KYREF-RSG-----------DVR 313 (351)
T ss_dssp CCGGG-CSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-------------------EEECC-CTT-----------CCS
T ss_pred hcccc-CCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccc--------------cccCC-CCC-----------ccc
Confidence 73 34 6889999999999999999999999997443322220 00000 000 012
Q ss_pred CcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 289 DTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 289 ~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
...++. +++++.|||+|+ +++++++++++||+++
T Consensus 314 ~~~~d~-~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 314 HSQADV-TKAIDLLKYRPNIKIREGLRLSMPWYVRF 348 (351)
T ss_dssp BCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred eeeeCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 334555 588889999998 9999999999999864
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-44 Score=317.20 Aligned_cols=302 Identities=14% Similarity=0.122 Sum_probs=231.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|+|||||||||||++|+++|+++|++|++++|+++... .+.. .+++++.+|++|++++.++++++|+|||+|+.
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~l~~----~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~ 87 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQ-RLAY----LEPECRVAEMLDHAGLERALRGLDGVIFSAGY 87 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGG-GGGG----GCCEEEECCTTCHHHHHHHTTTCSEEEEC---
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhh-hhcc----CCeEEEEecCCCHHHHHHHHcCCCEEEECCcc
Confidence 479999999999999999999999999999999876532 2221 25889999999999999999999999999997
Q ss_pred cc--ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------------CchHHHhHHHHHHHH
Q 047628 87 EY--ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------------PSRVFSTKAAAEEAV 146 (327)
Q Consensus 87 ~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------------~~~y~~~K~~~E~~~ 146 (327)
.. .......+++|+.++.+++++|++.+ +++|||+||.+++... .+.|+.+|..+|+++
T Consensus 88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~ 166 (342)
T 2x4g_A 88 YPSRPRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQA 166 (342)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHH
Confidence 54 23456788999999999999999998 9999999998876432 458999999999998
Q ss_pred Hhh---CCCeEEEecCeeecCCC-h-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEe
Q 047628 147 LRE---LPWATIMRPAAMIGTED-R-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYEL 221 (327)
Q Consensus 147 ~~~---~~~~~i~r~~~~~G~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v 221 (327)
+.+ +++++++||+.+||+.. . .+..+...+..+....+ ++..++++|++|+|++++.+++++.. +++||+
T Consensus 167 ~~~~~~g~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~v~Dva~~~~~~~~~~~~--g~~~~v 241 (342)
T 2x4g_A 167 REQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY---VAGQRNVIDAAEAGRGLLMALERGRI--GERYLL 241 (342)
T ss_dssp HHHHHTTCCEEEEEECEEECSCCSSCSTTHHHHHHHTTCCCEE---ECCEEEEEEHHHHHHHHHHHHHHSCT--TCEEEE
T ss_pred HHHhhcCCcEEEEeCCceECCCCccccHHHHHHHHHcCCCccc---cCCCcceeeHHHHHHHHHHHHhCCCC--CceEEE
Confidence 874 79999999999999865 2 14455555555544444 56788999999999999999998764 789999
Q ss_pred cCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccc
Q 047628 222 GGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQD 301 (327)
Q Consensus 222 ~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (327)
++++ +|+.|+++.+.+.+|.+..+ .+|.+..+..+.+.+.+....+. ++.+.++....+.....++. +++++.
T Consensus 242 ~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~-~k~~~~ 314 (342)
T 2x4g_A 242 TGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQ----LPLLDETAIEVMAGGQFLDG-RKAREE 314 (342)
T ss_dssp CCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC--------------------CCTTCCCCBCC-HHHHHH
T ss_pred cCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCC----CCCCCHHHHHHHhcCcccCh-HHHHHh
Confidence 9998 99999999999999998887 88988877666544433222111 11123333333334455665 488888
Q ss_pred cCC-ccccccCccHHHHHHHhhCCCC
Q 047628 302 LGI-VPHKLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 302 lg~-~p~~~~~~l~~~~~~~~~~g~~ 326 (327)
||| +|.+++++++++++||+++|+.
T Consensus 315 lG~~~p~~~~~~l~~~~~~~~~~g~~ 340 (342)
T 2x4g_A 315 LGFFSTTALDDTLLRAIDWFRDNGYF 340 (342)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 999 9999999999999999999974
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-43 Score=316.17 Aligned_cols=285 Identities=17% Similarity=0.184 Sum_probs=231.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCC-CchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCE-DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANV 79 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~ 79 (327)
+++|+|||||||||||++|+++|+++| ++|++++|... .....+......++++++.+|++|++.+.+++++ +|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 446899999999999999999999999 78888888763 2233333333335799999999999999999988 999
Q ss_pred EEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------CchHHHhHHH
Q 047628 80 VINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------PSRVFSTKAA 141 (327)
Q Consensus 80 vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~~~y~~~K~~ 141 (327)
|||||+.... ..+...+++|+.++.+++++|++.+ +++|||+||.+++... .+.|+.+|..
T Consensus 102 Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~ 180 (346)
T 4egb_A 102 IVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKAS 180 (346)
T ss_dssp EEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHH
T ss_pred EEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHH
Confidence 9999997543 3456788999999999999999998 9999999998776433 1789999999
Q ss_pred HHHHHHh----hCCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 142 AEEAVLR----ELPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 142 ~E~~~~~----~~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
+|++++. .+++++++||+.+||++. .++..+...+..+..++++++++..++++|++|+|++++.+++++..
T Consensus 181 ~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~- 259 (346)
T 4egb_A 181 ADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGRV- 259 (346)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCCT-
T ss_pred HHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCCC-
Confidence 9999987 479999999999999965 46777788788888888889999999999999999999999998774
Q ss_pred CCceEEecCCccccHHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccC
Q 047628 215 MGKIYELGGPDIFTVHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (327)
|++||+++++.+|+.|+++.+++.+|.+.... ..+. .+. ......++
T Consensus 260 -g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------~~~-----------~~~~~~~d 307 (346)
T 4egb_A 260 -GEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTD--------------------RLG-----------HDRRYAIN 307 (346)
T ss_dssp -TCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC----------------------C-----------CCSCCCBC
T ss_pred -CCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCC--------------------CCC-----------Ccceeecc
Confidence 78999999999999999999999999865422 1110 000 01123445
Q ss_pred CCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 294 DNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 294 ~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
. +++++.|||+|+ +++++++++++||++++
T Consensus 308 ~-~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 338 (346)
T 4egb_A 308 A-EKMKNEFDWEPKYTFEQGLQETVQWYEKNE 338 (346)
T ss_dssp C-HHHHHHHCCCCCCCHHHHHHHHHHHHHHCH
T ss_pred H-HHHHHHcCCCCCCCHHHHHHHHHHHHHhhh
Confidence 5 588889999998 99999999999999863
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-44 Score=321.81 Aligned_cols=295 Identities=18% Similarity=0.220 Sum_probs=233.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCC-ChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR-DDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~d~vi~ 82 (327)
|++|+|||||||||||++|+++|+++ |++|++++|+.+....... .++++++.+|++ +++.+.++++++|+|||
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih 97 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK----HERMHFFEGDITINKEWVEYHVKKCDVILP 97 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG----STTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc----CCCeEEEeCccCCCHHHHHHHhccCCEEEE
Confidence 55789999999999999999999998 9999999998766433222 146999999999 99999999999999999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------------C-chHHHh
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------------P-SRVFST 138 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------------~-~~y~~~ 138 (327)
||+.... ..+...+++|+.++.+++++|++.+ ++|||+||.+++... | +.|+.+
T Consensus 98 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~s 175 (372)
T 3slg_A 98 LVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACS 175 (372)
T ss_dssp CBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHH
T ss_pred cCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHH
Confidence 9997543 3455778999999999999999997 799999998775331 1 379999
Q ss_pred HHHHHHHHHhh---CCCeEEEecCeeecCCCh-----------hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 139 KAAAEEAVLRE---LPWATIMRPAAMIGTEDR-----------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 139 K~~~E~~~~~~---~~~~~i~r~~~~~G~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
|..+|++++.+ +++++++||+.+||++.. ++..+...+..+..+.+++++++.++++|++|+|+++
T Consensus 176 K~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 255 (372)
T 3slg_A 176 KQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGISAL 255 (372)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHHHH
Confidence 99999999988 799999999999999742 6777888888888888889899999999999999999
Q ss_pred HHHhhcCC--CCCCceEEecCC-ccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHH
Q 047628 205 TAALKDDG--TSMGKIYELGGP-DIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD 281 (327)
Q Consensus 205 ~~~l~~~~--~~~~~~~~v~~~-~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
+.+++++. . .+++||++++ +.+|+.|+++.+++.+|.+..+...|... ..... +.. .+...
T Consensus 256 ~~~~~~~~~~~-~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~------------~~~~~--~~~-~~~~~ 319 (372)
T 3slg_A 256 MKIIENSNGVA-TGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRV------------KLVET--TSG-AYYGN 319 (372)
T ss_dssp HHHHHCGGGTT-TTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTC------------CEEEC-----------
T ss_pred HHHHhcccCcC-CCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccc------------eeeec--ccc-ccccC
Confidence 99999875 4 5899999995 89999999999999999876644332100 00000 000 00000
Q ss_pred HHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 282 EINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
. ........++. +++++.|||+|+ +++++++++++||+++
T Consensus 320 ~-~~~~~~~~~d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 320 G-YQDVQNRVPKI-ENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp ------CCCCBCC-HHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred C-ccccceeecCH-HHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 0 00112334454 588899999998 9999999999999875
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=311.26 Aligned_cols=284 Identities=16% Similarity=0.120 Sum_probs=231.6
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHh--CCCEEEEeeCCCCCch---------hhhcccCCCCCeeEEeeCCCChhHH
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAK--MGSQVLVPFRGCEDDP---------RHLKLMGDLGQIVPMKFNPRDDNTI 70 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~--~g~~V~~~~R~~~~~~---------~~~~~~~~~~~v~~~~~Dl~~~~~~ 70 (327)
++.+++|+|||||||||||++|+++|++ .|++|++++|+.+... ...... ...++.++.+|+++++.+
T Consensus 5 ~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~ 83 (362)
T 3sxp_A 5 DDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL-IGFKGEVIAADINNPLDL 83 (362)
T ss_dssp SCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG-TTCCSEEEECCTTCHHHH
T ss_pred chhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc-cccCceEEECCCCCHHHH
Confidence 4456678999999999999999999999 9999999999765210 001111 113578999999999999
Q ss_pred HHH-hccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------CchH
Q 047628 71 KAT-MAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------PSRV 135 (327)
Q Consensus 71 ~~~-~~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------~~~y 135 (327)
.++ ..++|+|||||+.... ..+...+++|+.++.+++++|++.+ ++ |||+||.++++.. .+.|
T Consensus 84 ~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y 161 (362)
T 3sxp_A 84 RRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTKAPNVVGKNESPENVY 161 (362)
T ss_dssp HHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCCSSBCTTSCCCCSSHH
T ss_pred HHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCCCCCCCCCCCCCCChh
Confidence 998 7889999999997543 3456788999999999999999998 76 9999998775432 1679
Q ss_pred HHhHHHHHHHHHhhC--CCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLREL--PWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 136 ~~~K~~~E~~~~~~~--~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+.+|..+|++++.+. ++++++||+.+|||+. .++..+...+..+..+.+++++++.++++|++|+|++++.
T Consensus 162 ~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~ 241 (362)
T 3sxp_A 162 GFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVK 241 (362)
T ss_dssp HHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHH
Confidence 999999999999987 7899999999999975 4567777777778888888888999999999999999999
Q ss_pred HhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhh
Q 047628 207 ALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAY 286 (327)
Q Consensus 207 ~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
+++.+.. | +||+++++.+|+.|+++.+.+.+| +.++...|.+. ...
T Consensus 242 ~~~~~~~--g-~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~------------------------------~~~ 287 (362)
T 3sxp_A 242 AMKAQKS--G-VYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY------------------------------AFF 287 (362)
T ss_dssp HTTCSSC--E-EEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC------------------------------------
T ss_pred HHhcCCC--C-EEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC------------------------------cCc
Confidence 9998754 6 999999999999999999999999 77766665210 001
Q ss_pred hcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 287 TSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 287 ~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.....++. +++++.|||+|+ +++++++++++||++.
T Consensus 288 ~~~~~~d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 324 (362)
T 3sxp_A 288 QKHTQAHI-EPTILDLDYTPLYDLESGIKDYLPHIHAI 324 (362)
T ss_dssp -CCCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHTCC
T ss_pred ccceecCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 22345555 488899999998 9999999999999874
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-43 Score=305.67 Aligned_cols=283 Identities=18% Similarity=0.145 Sum_probs=224.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+|||||||||||++|+++|+++|++|++++|+++....... .+++++.+|+.+++ +.+++++ |+|||+|+..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~ 73 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVN-----PSAELHVRDLKDYS-WGAGIKG-DVVFHFAANP 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSC-----TTSEEECCCTTSTT-TTTTCCC-SEEEECCSSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcC-----CCceEEECccccHH-HHhhcCC-CEEEECCCCC
Confidence 689999999999999999999999999999998766433221 46899999999998 8888888 9999999864
Q ss_pred c----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHHhh-
Q 047628 88 Y----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVLRE- 149 (327)
Q Consensus 88 ~----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~~~- 149 (327)
. ...+...+++|+.++.+++++|++.+ +++|||+||..++... .+.|+.+|.++|++++.+
T Consensus 74 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~ 152 (312)
T 3ko8_A 74 EVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYA 152 (312)
T ss_dssp SSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred CchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHH
Confidence 3 23345678899999999999999998 8999999998775321 178999999999998764
Q ss_pred ---CCCeEEEecCeeecCCC--hhHHHHHHHHhhc-CceeeecCCCceecceeHHHHHHHHHHHhhc---CCCCCCceEE
Q 047628 150 ---LPWATIMRPAAMIGTED--RLLNKWAQFVKKF-NFFPLFGDGSTRIQPVYVVDVAAAVTAALKD---DGTSMGKIYE 220 (327)
Q Consensus 150 ---~~~~~i~r~~~~~G~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---~~~~~~~~~~ 220 (327)
+++++++||+.+||++. ..+..+...+..+ ..+.+++++++.++++|++|+|++++.++++ +.. .+++||
T Consensus 153 ~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~-~~~~~n 231 (312)
T 3ko8_A 153 RLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDA-PFLALN 231 (312)
T ss_dssp HHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCC-SEEEEE
T ss_pred HHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCC-CCcEEE
Confidence 69999999999999964 3555666555555 5677888999999999999999999999998 444 578999
Q ss_pred ecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCccccc
Q 047628 221 LGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300 (327)
Q Consensus 221 v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (327)
+++++.+|+.|+++.+.+.+|.+..+...|..... . . .+. ......++. +++++
T Consensus 232 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~--~--~~~-----------~~~~~~~d~-~k~~~ 285 (312)
T 3ko8_A 232 VGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDG----------R--G--WPG-----------DVKYMTLAV-TKLMK 285 (312)
T ss_dssp ESCSSCEEHHHHHHHHHHHHTCCCEEEEC------------------------C-----------CCSEECBCC-HHHHH
T ss_pred EcCCCceeHHHHHHHHHHHhCCCCceeecCccccc----------c--C--CCC-----------CccccccCH-HHHHH
Confidence 99999999999999999999988776665522100 0 0 000 011234454 58889
Q ss_pred ccCCccc-cccCccHHHHHHHhhCCC
Q 047628 301 DLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 301 ~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
.|||+|+ +++++++++++|++++||
T Consensus 286 ~lG~~p~~~~~~~l~~~~~~~~~~~~ 311 (312)
T 3ko8_A 286 LTGWRPTMTSAEAVKKTAEDLAKELW 311 (312)
T ss_dssp HHCCCCSSCHHHHHHHHHHHHHHHHC
T ss_pred HhCCCCCCCHHHHHHHHHHHHHhhhc
Confidence 9999998 999999999999999887
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-43 Score=310.69 Aligned_cols=271 Identities=17% Similarity=0.050 Sum_probs=229.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
.++|+|||||||||||++|++.|+++|++|++++|+++. .+++++.+|+++++.+.++++++|+|||+|
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 85 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIMGVSAVLHLG 85 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHTTCSEEEECC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHhCCCEEEECC
Confidence 346899999999999999999999999999999998765 258899999999999999999999999999
Q ss_pred ccccccC--cchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC---------------CchHHHhHHHHHHHHH
Q 047628 85 GREYETR--NYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS---------------PSRVFSTKAAAEEAVL 147 (327)
Q Consensus 85 ~~~~~~~--~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~---------------~~~y~~~K~~~E~~~~ 147 (327)
+...... ....+++|+.++.+++++|++.+ +++|||+||.++++.. .+.|+.+|..+|++++
T Consensus 86 ~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 164 (347)
T 4id9_A 86 AFMSWAPADRDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVR 164 (347)
T ss_dssp CCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred cccCcchhhHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHH
Confidence 8754322 25788999999999999999998 9999999998876541 1789999999999997
Q ss_pred hh----CCCeEEEecCeee-------------cCC--------------ChhHHHHHHHHhhcCceeeecCCCceecc--
Q 047628 148 RE----LPWATIMRPAAMI-------------GTE--------------DRLLNKWAQFVKKFNFFPLFGDGSTRIQP-- 194 (327)
Q Consensus 148 ~~----~~~~~i~r~~~~~-------------G~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 194 (327)
.+ +++++++||+.+| |++ ..++..+...+..+..+.++++++..+++
T Consensus 165 ~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 244 (347)
T 4id9_A 165 FHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGRPFRM 244 (347)
T ss_dssp HHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCCBCEE
T ss_pred HHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCcccCCcc
Confidence 54 6999999999999 875 45566677777777778888888888999
Q ss_pred --eeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCC
Q 047628 195 --VYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL 272 (327)
Q Consensus 195 --i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (327)
+|++|+|++++.+++++.. .+++||+++++.+|+.|+++.+++.+|.+..+...|.
T Consensus 245 ~~i~v~Dva~ai~~~~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~--------------------- 302 (347)
T 4id9_A 245 HITDTRDMVAGILLALDHPEA-AGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPG--------------------- 302 (347)
T ss_dssp CEEEHHHHHHHHHHHHHCGGG-TTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSS---------------------
T ss_pred CcEeHHHHHHHHHHHhcCccc-CCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCC---------------------
Confidence 9999999999999998855 5889999999999999999999999998776655541
Q ss_pred CCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 273 PRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
. .....++. +++++.|||+|+ +++++++++++||+++
T Consensus 303 --~-----------~~~~~~d~-~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 340 (347)
T 4id9_A 303 --D-----------GVYYHTSN-ERIRNTLGFEAEWTMDRMLEEAATARRQR 340 (347)
T ss_dssp --C-----------CCBCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred --c-----------ccccccCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHhh
Confidence 0 00344555 588889999998 9999999999999875
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-42 Score=303.36 Aligned_cols=286 Identities=16% Similarity=0.150 Sum_probs=227.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc--cccEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA--KANVVI 81 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi 81 (327)
++|+|||||||||||++++++|+++|++|++++|+.+.......... ...+++++.+|++|++++.++++ ++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 35799999999999999999999999999999998776543322110 01368899999999999999998 799999
Q ss_pred Eccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC---------C----chHHHhHHHHHH
Q 047628 82 NLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS---------P----SRVFSTKAAAEE 144 (327)
Q Consensus 82 ~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~---------~----~~y~~~K~~~E~ 144 (327)
|+|+.... ..+...+++|+.++.++++++++.+ +++||++||..++... + +.|+.+|..+|+
T Consensus 84 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 162 (341)
T 3enk_A 84 HFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQ 162 (341)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHH
T ss_pred ECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence 99987532 2345678899999999999999998 8999999998775322 1 689999999999
Q ss_pred HHHhh-----CCCeEEEecCeeecCCC-------------hhHHHHHHHHhh-cCceeeec------CCCceecceeHHH
Q 047628 145 AVLRE-----LPWATIMRPAAMIGTED-------------RLLNKWAQFVKK-FNFFPLFG------DGSTRIQPVYVVD 199 (327)
Q Consensus 145 ~~~~~-----~~~~~i~r~~~~~G~~~-------------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~D 199 (327)
+++.+ +++++++||+.+||+.. .+++.+...... ...+.++| ++++.++++|++|
T Consensus 163 ~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D 242 (341)
T 3enk_A 163 ILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVD 242 (341)
T ss_dssp HHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHH
T ss_pred HHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHH
Confidence 99865 38999999999999842 234444443332 25666777 7889999999999
Q ss_pred HHHHHHHHhhcC--CCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCC
Q 047628 200 VAAAVTAALKDD--GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGL 277 (327)
Q Consensus 200 ~a~~~~~~l~~~--~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (327)
+|++++.++++. .. .+++||+++++.+|+.|+++.+.+.+|.+.++...+. .+..
T Consensus 243 va~a~~~~~~~~~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------~~~~-- 299 (341)
T 3enk_A 243 LARGHIAALDALERRD-ASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR--------------------RPGD-- 299 (341)
T ss_dssp HHHHHHHHHHHHHHHT-SCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECC--------------------CTTC--
T ss_pred HHHHHHHHHHhhhcCC-cceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCC--------------------CCCC--
Confidence 999999999872 23 5789999999999999999999999998877655541 0000
Q ss_pred CCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 278 FNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
......+. +++++.|||+|+ +++++++++++||+++..
T Consensus 300 ---------~~~~~~d~-~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~ 338 (341)
T 3enk_A 300 ---------VAECYANP-AAAAETIGWKAERDLERMCADHWRWQENNPR 338 (341)
T ss_dssp ---------CSEECBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred ---------ccccccCH-HHHHHHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence 11234454 588899999996 999999999999999864
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-41 Score=306.66 Aligned_cols=281 Identities=15% Similarity=0.134 Sum_probs=228.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++|+|||||||||||++|+++|+++| ++|++++|+.+.....+. ..++++++.+|+++++++.++++++|+||||
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~ 106 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQDEYDYVFHL 106 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCSCCSEEEEC
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhhCCCEEEEC
Confidence 346899999999999999999999999 999999998765432222 1246899999999999999999999999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccCCC-----------CCC-------C-chHHHhH
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGAS-----------SSS-------P-SRVFSTK 139 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~v~-----------~~~-------~-~~y~~~K 139 (327)
|+.... ..+...+++|+.++.+++++|++. + +++|||+||..++ |+. | +.|+.+|
T Consensus 107 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK 185 (377)
T 2q1s_A 107 ATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSK 185 (377)
T ss_dssp CCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHH
T ss_pred CCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHH
Confidence 997542 244578899999999999999998 8 8999999998764 322 2 6899999
Q ss_pred HHHHHHHHhh----CCCeEEEecCeeecCCC----------------hhHHHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 140 AAAEEAVLRE----LPWATIMRPAAMIGTED----------------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 140 ~~~E~~~~~~----~~~~~i~r~~~~~G~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
..+|++++.+ +++++++||+.+||+.. .++..+...+..+..+.+++++++.++++|++|
T Consensus 186 ~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~D 265 (377)
T 2q1s_A 186 IFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFVED 265 (377)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEHHH
Confidence 9999998764 69999999999999865 346667777777777777888889999999999
Q ss_pred HHHH-HHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCC
Q 047628 200 VAAA-VTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLF 278 (327)
Q Consensus 200 ~a~~-~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (327)
+|++ ++.+++++. .| +||+++++.+|+.|+++.+.+.+|.+..+...|..
T Consensus 266 va~a~i~~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-------------------------- 316 (377)
T 2q1s_A 266 VANGLIACAADGTP--GG-VYNIASGKETSIADLATKINEITGNNTELDRLPKR-------------------------- 316 (377)
T ss_dssp HHHHHHHHHHHCCT--TE-EEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC--------------------------
T ss_pred HHHHHHHHHHhcCC--CC-eEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC--------------------------
Confidence 9999 999998865 36 99999999999999999999999987665544410
Q ss_pred CHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 279 NLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.. .......++. +++++.|||+|+ +++|+++++++||+++
T Consensus 317 -~~---~~~~~~~~d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 317 -PW---DNSGKRFGSP-EKARRELGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp -GG---GCC-CCCCCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHHT
T ss_pred -cc---ccccccccCH-HHHHHHcCCCCCCCHHHHHHHHHHHHHHh
Confidence 00 0011344555 488889999996 9999999999999864
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-42 Score=301.68 Aligned_cols=278 Identities=15% Similarity=0.159 Sum_probs=221.6
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC---chhhhcccCCCCCeeEEeeCCCChhHHHHHhccc
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED---DPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA 77 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~---~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~ 77 (327)
|.+.+++|+|||||||||||++|+++|+++|++|++++|+.+. ....+.......+++++.+|+. ++
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------~~ 70 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------DV 70 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------TE
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------cC
Confidence 4555667899999999999999999999999999999998762 2222222111234666666654 79
Q ss_pred cEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHH
Q 047628 78 NVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~ 140 (327)
|+|||+|+.... ..+...++ |+.++.+++++|++.+ +++|||+||.+++... .+.|+.+|.
T Consensus 71 d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~sK~ 148 (321)
T 3vps_A 71 RLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAASKV 148 (321)
T ss_dssp EEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHH
T ss_pred CEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHHHH
Confidence 999999987542 34456667 9999999999999999 9999999998775432 278999999
Q ss_pred HHHHHHHhh----CC-CeEEEecCeeecCCCh---hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 141 AAEEAVLRE----LP-WATIMRPAAMIGTEDR---LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 141 ~~E~~~~~~----~~-~~~i~r~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+|++++.+ ++ +++++||+.+||++.. ++..+...+..++.+.++++++..++++|++|+|++++.+++++.
T Consensus 149 ~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~ 228 (321)
T 3vps_A 149 GLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPL 228 (321)
T ss_dssp HHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCC
T ss_pred HHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCC
Confidence 999999874 57 9999999999999653 577777778888888999999999999999999999999999887
Q ss_pred CCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCccc
Q 047628 213 TSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV 292 (327)
Q Consensus 213 ~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (327)
. | +||+++++.+|+.|+++.+. .+|.+.++...+.+ +. ......+
T Consensus 229 ~--g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~--------------------~~-----------~~~~~~~ 273 (321)
T 3vps_A 229 P--S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR--------------------PN-----------EITEFRA 273 (321)
T ss_dssp C--S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC--------------------TT-----------CCSBCCB
T ss_pred C--C-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCC--------------------CC-----------Ccceeec
Confidence 5 6 99999999999999999999 99988776655510 00 0123445
Q ss_pred CCCcccccccCCcc--ccccCccHHHHHHHhhCCCC
Q 047628 293 SDNALTFQDLGIVP--HKLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 293 ~~~~~~~~~lg~~p--~~~~~~l~~~~~~~~~~g~~ 326 (327)
+. +++++.|||+| .+++++++++++||+++++.
T Consensus 274 d~-~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~~~~ 308 (321)
T 3vps_A 274 DT-ALQTRQIGERSGGIGIEEGIRLTLEWWQSRDLD 308 (321)
T ss_dssp CC-HHHHHHHCCCSCCCCHHHHHHHHHHHHHTSCTT
T ss_pred cH-HHHHHHhCCCCCcCCHHHHHHHHHHHHHhCCCc
Confidence 55 58888899999 59999999999999998864
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=303.21 Aligned_cols=276 Identities=16% Similarity=0.154 Sum_probs=227.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
++|+|||||||||||++|+++|+++|++|++++|+........ ..+++++.+|+++++++.++++++|+|||+|+
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~ 102 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-----MFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA 102 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-----GTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-----cCCceEEECCCCCHHHHHHHhCCCCEEEECce
Confidence 4689999999999999999999999999999999876532211 13588999999999999999999999999998
Q ss_pred ccc-----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-------------------C-CchHHHhHH
Q 047628 86 REY-----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------------S-PSRVFSTKA 140 (327)
Q Consensus 86 ~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------------~-~~~y~~~K~ 140 (327)
... ...+...+++|+.++.+++++|++.+ +++|||+||.+++.. . .+.|+.+|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~ 181 (379)
T 2c5a_A 103 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKL 181 (379)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHH
T ss_pred ecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHH
Confidence 753 23445688899999999999999998 899999999877542 1 268999999
Q ss_pred HHHHHHHhh----CCCeEEEecCeeecCCCh-------hHHHHHHHHhhcCc-eeeecCCCceecceeHHHHHHHHHHHh
Q 047628 141 AAEEAVLRE----LPWATIMRPAAMIGTEDR-------LLNKWAQFVKKFNF-FPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 141 ~~E~~~~~~----~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+|++++.+ +++++++||+.+||+... .+..+...+..+.. +.+++++++.++++|++|+|++++.++
T Consensus 182 ~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~~l 261 (379)
T 2c5a_A 182 ATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLT 261 (379)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHHHh
Confidence 999998654 699999999999998643 46666666655654 778888899999999999999999999
Q ss_pred hcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhc
Q 047628 209 KDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTS 288 (327)
Q Consensus 209 ~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (327)
+++ . +++||+++++.+|+.|+++.+.+.+|.+.++..+|.+ .. ..
T Consensus 262 ~~~-~--~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~---------------------~~-----------~~ 306 (379)
T 2c5a_A 262 KSD-F--REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP---------------------EG-----------VR 306 (379)
T ss_dssp HSS-C--CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC---------------------CC-----------CS
T ss_pred hcc-C--CCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCC---------------------CC-----------cc
Confidence 876 2 5799999999999999999999999987766555510 00 01
Q ss_pred CcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 289 DTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 289 ~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
...++. +++++.|||+|+ +++++++++++||+++
T Consensus 307 ~~~~d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 341 (379)
T 2c5a_A 307 GRNSDN-NLIKEKLGWAPNMRLKEGLRITYFWIKEQ 341 (379)
T ss_dssp BCEECC-HHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred cccCCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 223454 488889999998 9999999999999864
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=298.50 Aligned_cols=272 Identities=17% Similarity=0.118 Sum_probs=220.4
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVI 81 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi 81 (327)
+|++|+|||||||||||++|+++|+++|+ +.... . ..++.+.+|++|++.+.+++++ +|+||
T Consensus 3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~-~---------~~~~~~~~D~~d~~~~~~~~~~~~~d~Vi 66 (319)
T 4b8w_A 3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGED-W---------VFVSSKDADLTDTAQTRALFEKVQPTHVI 66 (319)
T ss_dssp CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCE-E---------EECCTTTCCTTSHHHHHHHHHHSCCSEEE
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhcCC------ccccc-c---------cccCceecccCCHHHHHHHHhhcCCCEEE
Confidence 46679999999999999999999999998 11111 0 1356678999999999999987 99999
Q ss_pred Ecccccc-----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC----------------C-c-hHHHh
Q 047628 82 NLIGREY-----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS----------------P-S-RVFST 138 (327)
Q Consensus 82 ~~a~~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~----------------~-~-~y~~~ 138 (327)
|||+... ...+...+++|+.++.+++++|++.+ +++|||+||..+++.. | + +|+.+
T Consensus 67 h~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~s 145 (319)
T 4b8w_A 67 HLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYA 145 (319)
T ss_dssp ECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHH
T ss_pred ECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHH
Confidence 9999753 23445688999999999999999999 9999999998876431 1 2 59999
Q ss_pred HHHHHHHHHh----hCCCeEEEecCeeecCCCh-------hHHHHHHH----HhhcCceeeecCCCceecceeHHHHHHH
Q 047628 139 KAAAEEAVLR----ELPWATIMRPAAMIGTEDR-------LLNKWAQF----VKKFNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 139 K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~-------~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
|..+|++++. .+++++++||+.+||++.. +++.+... +..+..+.+++++++.++++|++|+|++
T Consensus 146 K~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a 225 (319)
T 4b8w_A 146 KRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQL 225 (319)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHH
Confidence 9999999876 4799999999999999653 44555554 6778888888999999999999999999
Q ss_pred HHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHH
Q 047628 204 VTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEI 283 (327)
Q Consensus 204 ~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (327)
++.+++++....+++||+++++.+|+.|+++.+.+.+|.+.++...+. .+..
T Consensus 226 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------~~~~-------- 277 (319)
T 4b8w_A 226 FIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTT--------------------KSDG-------- 277 (319)
T ss_dssp HHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETT--------------------SCCC--------
T ss_pred HHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCC--------------------CCcC--------
Confidence 999999855325779999999999999999999999998776554431 0000
Q ss_pred HhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 284 NAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
.....++. +++++.|||.|. +++++++++++||+++-
T Consensus 278 ---~~~~~~d~-~k~~~~lg~~p~~~~~~~l~~~~~~~~~~~ 315 (319)
T 4b8w_A 278 ---QFKKTASN-SKLRTYLPDFRFTPFKQAVKETCAWFTDNY 315 (319)
T ss_dssp ---CSCCCBCC-HHHHHHCTTCCCCCHHHHHHHHHHHHHHSC
T ss_pred ---cccccCCH-HHHHHhcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 11234555 589899999996 99999999999999864
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=303.67 Aligned_cols=287 Identities=14% Similarity=0.095 Sum_probs=227.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc----CC--CCCeeEEeeCCCChhHHHHHhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM----GD--LGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~----~~--~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
+++|+|||||||||||++|+++|+++|++|++++|+.......+... .. ..+++++.+|+++++++.++++++|
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 104 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 104 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCC
Confidence 45689999999999999999999999999999999875432222110 00 1368999999999999999999999
Q ss_pred EEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHH
Q 047628 79 VVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAA 141 (327)
Q Consensus 79 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~ 141 (327)
+|||||+.... ..+...+++|+.++.+++++|++.+ +++|||+||.+++... .+.|+.+|..
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~ 183 (352)
T 1sb8_A 105 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV 183 (352)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred EEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHH
Confidence 99999997532 2445678899999999999999998 8999999998775432 2689999999
Q ss_pred HHHHHHhh----CCCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 142 AEEAVLRE----LPWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 142 ~E~~~~~~----~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+|++++.+ +++++++||+.+||+.. .++..+...+..+..+.+++++++.++++|++|+|++++.++..
T Consensus 184 ~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~ 263 (352)
T 1sb8_A 184 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA 263 (352)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhc
Confidence 99998654 79999999999999864 34566666677777777788999999999999999999999886
Q ss_pred C-CCCCCceEEecCCccccHHHHHHHHHHHh---hcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhh
Q 047628 211 D-GTSMGKIYELGGPDIFTVHELAELMYDTI---REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAY 286 (327)
Q Consensus 211 ~-~~~~~~~~~v~~~~~~s~~el~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
. .. .+++||+++++.+|+.|+++.+.+.+ |.+....+.. .+. .+. .
T Consensus 264 ~~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~-----------------~~~-~~~-----------~ 313 (352)
T 1sb8_A 264 GLDA-RNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVY-----------------RDF-REG-----------D 313 (352)
T ss_dssp CGGG-CSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEE-----------------ECC-CTT-----------C
T ss_pred cccC-CCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCcee-----------------cCC-Ccc-----------c
Confidence 3 33 57899999999999999999999999 8765432110 000 000 0
Q ss_pred hcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 287 TSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 287 ~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.....++. +++++.|||+|+ +++|+++++++||+++
T Consensus 314 ~~~~~~d~-~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 314 VRHSLADI-SKAAKLLGYAPKYDVSAGVALAMPWYIMF 350 (352)
T ss_dssp CSBCCBCC-HHHHHHTCCCCCCCHHHHHHHHHHHHHHH
T ss_pred hhhccCCH-HHHHHHhCCCCCCCHHHHHHHHHHHHHHh
Confidence 11234454 588889999996 9999999999999763
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-41 Score=297.70 Aligned_cols=277 Identities=15% Similarity=0.124 Sum_probs=225.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
.++|+|||||||||||++|+++|+++|++|++++|++.. .. + +++++.+|++|++++.+++++ +|+|||
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-l-------~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 80 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-P-------NVEMISLDIMDSQRVKKVISDIKPDYIFH 80 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-T-------TEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-c-------eeeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 346899999999999999999999999999999998765 21 1 488999999999999999987 899999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccCCCCCC---------------CchHHHhHHHH
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGASSSS---------------PSRVFSTKAAA 142 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~v~~~~---------------~~~y~~~K~~~ 142 (327)
||+.... ......+++|+.++.+++++|++. + +++|||+||..++... .+.|+.+|.++
T Consensus 81 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~ 159 (321)
T 2pk3_A 81 LAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNL-DCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASV 159 (321)
T ss_dssp CCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHH
T ss_pred cCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHH
Confidence 9997542 234568899999999999999876 5 7899999998776432 27899999999
Q ss_pred HHHHHhh----CCCeEEEecCeeecCCCh---hHHHHHHHHhh---c--CceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 143 EEAVLRE----LPWATIMRPAAMIGTEDR---LLNKWAQFVKK---F--NFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 143 E~~~~~~----~~~~~i~r~~~~~G~~~~---~~~~~~~~~~~---~--~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
|.+++.+ +++++++||+.+||++.. .+..+...+.. + ..+..+++++..++++|++|+|++++.++++
T Consensus 160 E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 239 (321)
T 2pk3_A 160 GMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQY 239 (321)
T ss_dssp HHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhC
Confidence 9999876 799999999999999653 45555555544 4 4667778888999999999999999999988
Q ss_pred CCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCc
Q 047628 211 DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDT 290 (327)
Q Consensus 211 ~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (327)
+. .+++||+++++.+|+.|+++.+.+.+|.+..+...|.+ . .+. .....
T Consensus 240 ~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~---------------~---~~~-----------~~~~~ 288 (321)
T 2pk3_A 240 GK--TGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ---------------L---RPS-----------EVPTL 288 (321)
T ss_dssp CC--TTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG---------------C---CSS-----------CCSBC
T ss_pred CC--CCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc---------------C---CCc-----------ccchh
Confidence 74 47899999999999999999999999987665554410 0 000 01234
Q ss_pred ccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 291 IVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 291 ~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.++. +++++.|||+|+ +++++++++++||+++
T Consensus 289 ~~d~-~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 321 (321)
T 2pk3_A 289 IGSN-KRLKDSTGWKPRIPLEKSLFEILQSYRQA 321 (321)
T ss_dssp CBCC-HHHHHHHCCCCCSCHHHHHHHHHHHHHTC
T ss_pred ccCH-HHHHHHcCCCcCCCHHHHHHHHHHHHhcC
Confidence 4555 488888999998 9999999999999864
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-41 Score=295.43 Aligned_cols=280 Identities=18% Similarity=0.177 Sum_probs=223.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a 84 (327)
||+|||||||||||++++++|+++|++|++++|+.......+. .+++++.+|+++++++.++++ ++|+|||+|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a 75 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAIT-----EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFA 75 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-----TTSEEEECCTTCHHHHHHHHHHSCEEEEEECC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcC-----CCcEEEECCCCCHHHHHHHHhhcCCCEEEECC
Confidence 4789999999999999999999999999999997655332221 258899999999999999998 899999999
Q ss_pred ccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHH
Q 047628 85 GREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVL 147 (327)
Q Consensus 85 ~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~ 147 (327)
+.... ..+...+++|+.++.+++++|++.+ +++|||+||.+++... .+.|+.+|..+|++++
T Consensus 76 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 154 (330)
T 2c20_A 76 ADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLH 154 (330)
T ss_dssp CCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred cccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHH
Confidence 87532 2445688999999999999999998 8999999998775421 2789999999999987
Q ss_pred hh----CCCeEEEecCeeecCCC------------hhHHHHHHHHhh-cCceeeec------CCCceecceeHHHHHHHH
Q 047628 148 RE----LPWATIMRPAAMIGTED------------RLLNKWAQFVKK-FNFFPLFG------DGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 148 ~~----~~~~~i~r~~~~~G~~~------------~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~i~~~D~a~~~ 204 (327)
.+ +++++++||+.+||++. .++..+...... .+.+.++| ++++.++++|++|+|+++
T Consensus 155 ~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~ 234 (330)
T 2c20_A 155 WYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAH 234 (330)
T ss_dssp HHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHH
T ss_pred HHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHH
Confidence 74 69999999999999852 244555544442 34566666 677899999999999999
Q ss_pred HHHhhcCCCC-CCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHH
Q 047628 205 TAALKDDGTS-MGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEI 283 (327)
Q Consensus 205 ~~~l~~~~~~-~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (327)
+.+++++... .+++||+++++.+|+.|+++.+.+.+|.+.++...+. .+..
T Consensus 235 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------~~~~-------- 286 (330)
T 2c20_A 235 FLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPR--------------------RAGD-------- 286 (330)
T ss_dssp HHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECC--------------------CSSC--------
T ss_pred HHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC--------------------CCCc--------
Confidence 9999865320 3689999999999999999999999998766554431 0000
Q ss_pred HhhhcCcccCCCcccccccCCccc--cccCccHHHHHHHhhCC
Q 047628 284 NAYTSDTIVSDNALTFQDLGIVPH--KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~lg~~p~--~~~~~l~~~~~~~~~~g 324 (327)
.....++. +++++.|||+|+ +++++++++++||+++.
T Consensus 287 ---~~~~~~d~-~k~~~~lG~~p~~~~l~~~l~~~~~~~~~~~ 325 (330)
T 2c20_A 287 ---PARLVASS-QKAKEKLGWDPRYVNVKTIIEHAWNWHQKQP 325 (330)
T ss_dssp ---CSEECBCC-HHHHHHHCCCCSCCCHHHHHHHHHHHHHHCS
T ss_pred ---ccccccCH-HHHHHHhCCCCccCCHHHHHHHHHHHHHHhh
Confidence 01234454 588889999997 89999999999998863
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-40 Score=293.31 Aligned_cols=284 Identities=19% Similarity=0.171 Sum_probs=222.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCC-chhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
++|+|||||||||||++++++|+++| ++|++++|.... ....+.......+++++.+|++|++++.+++.++|+|||
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 81 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVH 81 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEE
Confidence 45789999999999999999999986 899999997532 122222221124689999999999999999999999999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHH
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEA 145 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~ 145 (327)
+|+.... ..+...+++|+.++.+++++|++.+..++|||+||..++... .+.|+.+|..+|.+
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~ 161 (336)
T 2hun_A 82 LAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDML 161 (336)
T ss_dssp CCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHH
T ss_pred CCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHH
Confidence 9997532 345678899999999999999988622699999998764321 17899999999999
Q ss_pred HHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCce
Q 047628 146 VLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218 (327)
Q Consensus 146 ~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 218 (327)
++.+ +++++++||+.+||+.. .++..+...+..+..+++++++++.++++|++|+|++++.+++++. .|++
T Consensus 162 ~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~--~g~~ 239 (336)
T 2hun_A 162 VLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGE--SREI 239 (336)
T ss_dssp HHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCC--TTCE
T ss_pred HHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCC--CCCE
Confidence 8763 69999999999999964 3566666666667778888888899999999999999999998765 4789
Q ss_pred EEecCCccccHHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcc
Q 047628 219 YELGGPDIFTVHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNAL 297 (327)
Q Consensus 219 ~~v~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (327)
||+++++.+|+.|+++.+++.+|.+.+.. ..+ . .+.. .....++. ++
T Consensus 240 ~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~---------------~-----~~~~-----------~~~~~~d~-~k 287 (336)
T 2hun_A 240 YNISAGEEKTNLEVVKIILRLMGKGEELIELVE---------------D-----RPGH-----------DLRYSLDS-WK 287 (336)
T ss_dssp EEECCSCEECHHHHHHHHHHHTTCCSTTEEEEC---------------C-----CTTC-----------CCCCCBCC-HH
T ss_pred EEeCCCCcccHHHHHHHHHHHhCCCcccccccC---------------C-----CCCc-----------hhhhcCCH-HH
Confidence 99999999999999999999999764311 111 0 0000 11233454 58
Q ss_pred cccccCCccc-cccCccHHHHHHHhhC
Q 047628 298 TFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 298 ~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
+++.|||+|+ +++++++++++||+++
T Consensus 288 ~~~~lG~~p~~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 288 ITRDLKWRPKYTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp HHHHHCCCCSSCHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHhC
Confidence 8888999996 9999999999999875
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=295.99 Aligned_cols=277 Identities=18% Similarity=0.196 Sum_probs=216.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
||+|||||||||||++|+++|+++| .++++.|.......... ..++++.+|+++ +++.++++++|+|||+|+.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~-----~~~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~ 73 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVN-----EAARLVKADLAA-DDIKDYLKGAEEVWHIAAN 73 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSC-----TTEEEECCCTTT-SCCHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcC-----CCcEEEECcCCh-HHHHHHhcCCCEEEECCCC
Confidence 3689999999999999999999999 55555554433222221 368999999999 8999999999999999986
Q ss_pred ccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC---------CC----chHHHhHHHHHHHHHhh
Q 047628 87 EYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS---------SP----SRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 87 ~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~---------~~----~~y~~~K~~~E~~~~~~ 149 (327)
... ..+...+++|+.++.+++++|++.+ +++|||+||..++.. .| +.|+.+|.++|.+++.+
T Consensus 74 ~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~ 152 (313)
T 3ehe_A 74 PDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESY 152 (313)
T ss_dssp CCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred CChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 432 3345688999999999999999998 899999999877532 11 78999999999998764
Q ss_pred ----CCCeEEEecCeeecCCC--hhHHHHHHHHhhc-CceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEec
Q 047628 150 ----LPWATIMRPAAMIGTED--RLLNKWAQFVKKF-NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222 (327)
Q Consensus 150 ----~~~~~i~r~~~~~G~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~ 222 (327)
+++++++||+.+||+++ ..+..+...+..+ ..+.+++++++.++++|++|+|++++.+++... .+++||++
T Consensus 153 ~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~--~~~~~ni~ 230 (313)
T 3ehe_A 153 CHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDE--RVNIFNIG 230 (313)
T ss_dssp HHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCS--SEEEEECC
T ss_pred HHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCC--CCceEEEC
Confidence 69999999999999964 3555666555555 567788999999999999999999999999443 57899999
Q ss_pred CCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCccccccc
Q 047628 223 GPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302 (327)
Q Consensus 223 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (327)
+++.+|+.|+++.+++.+|.+..+...+.... + + .+ .....++. +++ +.|
T Consensus 231 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~---------------~--~------~~-----~~~~~~d~-~k~-~~l 280 (313)
T 3ehe_A 231 SEDQIKVKRIAEIVCEELGLSPRFRFTGGDRG---------------W--K------GD-----VPVMLLSI-EKL-KRL 280 (313)
T ss_dssp CSCCEEHHHHHHHHHHHTTCCCEEEEC----------------------------------------CCBCC-HHH-HHH
T ss_pred CCCCeeHHHHHHHHHHHhCCCCceEECCCccC---------------C--c------cc-----cceeccCH-HHH-HHc
Confidence 99999999999999999998766544331000 0 0 00 11234454 477 569
Q ss_pred CCccc-cccCccHHHHHHHhhC
Q 047628 303 GIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 303 g~~p~-~~~~~l~~~~~~~~~~ 323 (327)
||+|+ +++|+++++++||+++
T Consensus 281 G~~p~~~~~e~l~~~~~~~~~~ 302 (313)
T 3ehe_A 281 GWKPRYNSEEAVRMAVRDLVED 302 (313)
T ss_dssp TCCCSCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHhC
Confidence 99998 9999999999999875
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-40 Score=291.27 Aligned_cols=281 Identities=19% Similarity=0.211 Sum_probs=225.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC---C---CEEEEeeCCCCC-chhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM---G---SQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~---g---~~V~~~~R~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|+|||||||||||++++++|+++ | ++|++++|.... ....+.......+++++.+|+++++++.+++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 58999999999999999999997 8 999999997532 1222222211246899999999999999999999999
Q ss_pred EEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHH
Q 047628 81 INLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAE 143 (327)
Q Consensus 81 i~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E 143 (327)
||||+.... ..+...+++|+.++.+++++|++.+ +++|||+||..++... .+.|+.+|..+|
T Consensus 81 ih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e 159 (337)
T 1r6d_A 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSD 159 (337)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred EECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHH
Confidence 999997542 3456788999999999999999998 8999999997765321 278999999999
Q ss_pred HHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC
Q 047628 144 EAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG 216 (327)
Q Consensus 144 ~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 216 (327)
.+++.+ +++++++||+.+||+.. .++..+...+..+..+++++++++.++++|++|+|++++.+++++. .|
T Consensus 160 ~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~--~g 237 (337)
T 1r6d_A 160 LVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR--AG 237 (337)
T ss_dssp HHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC--TT
T ss_pred HHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCCC--CC
Confidence 998753 69999999999999964 3566666666667778888889999999999999999999998765 47
Q ss_pred ceEEecCCccccHHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCC
Q 047628 217 KIYELGGPDIFTVHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295 (327)
Q Consensus 217 ~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (327)
++||+++++.+|+.|+++.+.+.+|.+.+.. ..+ . .+. ......+++
T Consensus 238 ~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~---------------~-----~~~-----------~~~~~~~d~- 285 (337)
T 1r6d_A 238 EIYHIGGGLELTNRELTGILLDSLGADWSSVRKVA---------------D-----RKG-----------HDLRYSLDG- 285 (337)
T ss_dssp CEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEEC---------------C-----CTT-----------CCCBCCBCC-
T ss_pred CEEEeCCCCCccHHHHHHHHHHHhCCCcccceecC---------------C-----CCC-----------CcceeecCH-
Confidence 8999999999999999999999999764311 111 0 000 011223454
Q ss_pred cccccccCCccc-cccCccHHHHHHHhhC
Q 047628 296 ALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 296 ~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
+++++.|||+|+ +++++++++++||+++
T Consensus 286 ~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 314 (337)
T 1r6d_A 286 GKIERELGYRPQVSFADGLARTVRWYREN 314 (337)
T ss_dssp HHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHhc
Confidence 488888999996 9999999999999875
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=295.57 Aligned_cols=284 Identities=19% Similarity=0.201 Sum_probs=223.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC------chhhhcccC--CCCCeeEEeeCCCChhHHHHHhc--c
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED------DPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA--K 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~------~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~--~ 76 (327)
+|+|||||||||||++++++|+++|++|++++|.... ....+.... ...+++++.+|+++++++.++++ +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcC
Confidence 4799999999999999999999999999999986543 111111110 01358899999999999999998 7
Q ss_pred ccEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC------------C--CchHHHh
Q 047628 77 ANVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS------------S--PSRVFST 138 (327)
Q Consensus 77 ~d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~------------~--~~~y~~~ 138 (327)
+|+|||+|+.... ..+...+++|+.++.+++++|++.+ +++|||+||..++.. . .+.|+.+
T Consensus 82 ~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~s 160 (348)
T 1ek6_A 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS 160 (348)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred CCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHH
Confidence 9999999997532 3445688999999999999999998 899999999877532 1 3689999
Q ss_pred HHHHHHHHHhh---C--CCeEEEecCeeecCC-------------ChhHHHHHHHHh-hcCceeeec------CCCceec
Q 047628 139 KAAAEEAVLRE---L--PWATIMRPAAMIGTE-------------DRLLNKWAQFVK-KFNFFPLFG------DGSTRIQ 193 (327)
Q Consensus 139 K~~~E~~~~~~---~--~~~~i~r~~~~~G~~-------------~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~ 193 (327)
|..+|.+++.+ + ++++++||+.+||+. ..++..+...+. .++.+.++| ++++.++
T Consensus 161 K~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 240 (348)
T 1ek6_A 161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240 (348)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred HHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEe
Confidence 99999998764 4 899999999999983 235555665555 456677766 5678999
Q ss_pred ceeHHHHHHHHHHHhhcCC-CCCC-ceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCC
Q 047628 194 PVYVVDVAAAVTAALKDDG-TSMG-KIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFP 271 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~~-~~~~-~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (327)
++|++|+|++++.+++++. . .+ ++||+++++.+|+.|+++.+.+.+|.+.++...+.
T Consensus 241 ~i~v~Dva~a~~~~~~~~~~~-~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------- 299 (348)
T 1ek6_A 241 YIHVVDLAKGHIAALRKLKEQ-CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR-------------------- 299 (348)
T ss_dssp EEEHHHHHHHHHHHHHHHTTT-CCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC--------------------
T ss_pred eEEHHHHHHHHHHHHhccccc-CCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC--------------------
Confidence 9999999999999998753 2 34 89999999999999999999999998766544431
Q ss_pred CCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 272 LPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
.+.. .....++. +++++.|||+|+ +++++++++++||+++.
T Consensus 300 ~~~~-----------~~~~~~d~-~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~ 341 (348)
T 1ek6_A 300 REGD-----------VAACYANP-SLAQEELGWTAALGLDRMCEDLWRWQKQNP 341 (348)
T ss_dssp CTTC-----------CSEECBCC-HHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred CCcc-----------chhhccCH-HHHHHhcCCCCCCCHHHHHHHHHHHHHhcc
Confidence 0000 01234454 588889999997 99999999999998763
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-41 Score=297.14 Aligned_cols=284 Identities=15% Similarity=0.136 Sum_probs=222.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~ 83 (327)
||+|||||||||||++++++|+++|++|++++|..... ......+...++++++.+|+++++++.+++++ +|+|||+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHL 80 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhccCCCEEEEC
Confidence 36899999999999999999999999999999864322 11111111113588999999999999999998 9999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEeccCCCCC----------------------------
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCLGASSS---------------------------- 130 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~~v~~~---------------------------- 130 (327)
|+.... ..+...+++|+.++.+++++|++.+ ++ +|||+||..++..
T Consensus 81 A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~ 159 (347)
T 1orr_A 81 AGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQL 159 (347)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCC
T ss_pred CcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCC
Confidence 997532 2445688999999999999999998 76 9999999876431
Q ss_pred -CCchHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC------hhHHHHHHHHhhcC-----ceeeecCCCceecc
Q 047628 131 -SPSRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED------RLLNKWAQFVKKFN-----FFPLFGDGSTRIQP 194 (327)
Q Consensus 131 -~~~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 194 (327)
..+.|+.+|..+|++++.+ +++++++||+.+||+.. ..+..+...+..+. ++..++++++.+++
T Consensus 160 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ 239 (347)
T 1orr_A 160 DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDV 239 (347)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEEC
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCcceEee
Confidence 1268999999999998875 69999999999999863 24555555444444 57778899999999
Q ss_pred eeHHHHHHHHHHHhhcC-CCCCCceEEecCCc--cccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCC
Q 047628 195 VYVVDVAAAVTAALKDD-GTSMGKIYELGGPD--IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFP 271 (327)
Q Consensus 195 i~~~D~a~~~~~~l~~~-~~~~~~~~~v~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (327)
++++|+|++++.+++++ .. .|++||+++++ .+|+.|+++.+.+.+|.+.++...|.
T Consensus 240 i~v~Dva~a~~~~~~~~~~~-~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-------------------- 298 (347)
T 1orr_A 240 LHAEDMISLYFTALANVSKI-RGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV-------------------- 298 (347)
T ss_dssp EEHHHHHHHHHHHHHTHHHH-TTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC--------------------
T ss_pred EEHHHHHHHHHHHHhccccC-CCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC--------------------
Confidence 99999999999999852 23 57899999986 49999999999999998776555441
Q ss_pred CCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 272 LPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
.+.. .....+++ +++++.|||+|+ +++++++++++|++++-
T Consensus 299 ~~~~-----------~~~~~~d~-~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~ 340 (347)
T 1orr_A 299 RESD-----------QRVFVADI-KKITNAIDWSPKVSAKDGVQKMYDWTSSIL 340 (347)
T ss_dssp CSSC-----------CSEECBCC-HHHHHHHCCCCCSCHHHHHHHHHHHHHHC-
T ss_pred CCCC-----------cceeecCH-HHHHHHHCCCccCCHHHHHHHHHHHHHHHH
Confidence 0000 01233454 588889999996 99999999999999863
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-40 Score=292.74 Aligned_cols=280 Identities=19% Similarity=0.154 Sum_probs=225.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCC-chhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
||+|||||||||||++++++|+++ |++|++++|+... ....+.... .++++++.+|++|++++.++++++|+||||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-GDRVELVVGDIADAELVDKLAAKADAIVHY 82 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-SSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-cCCeEEEECCCCCHHHHHHHhhcCCEEEEC
Confidence 479999999999999999999998 8999999997632 122222221 146899999999999999999999999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-------------------------CCch
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------------------SPSR 134 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------------------~~~~ 134 (327)
|+.... ..+...+++|+.++.+++++|++.+ + +|||+||..++.. ..+.
T Consensus 83 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~ 160 (348)
T 1oc2_A 83 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP 160 (348)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSH
T ss_pred CcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCc
Confidence 997532 3456788999999999999999998 7 9999999766421 1178
Q ss_pred HHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 135 y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|+.+|..+|.+++.+ +++++++||+.+||+.. .++..+...+..+..+.+++++++.++++|++|+|++++.+
T Consensus 161 Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 240 (348)
T 1oc2_A 161 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 240 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHH
Confidence 999999999998764 69999999999999965 35666666666777778888888999999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAY 286 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
++.+. .|++||+++++.+|+.|+++.+.+.+|.+.... ..+. .|. .
T Consensus 241 ~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------~~~-----------~ 287 (348)
T 1oc2_A 241 LTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD--------------------RAG-----------H 287 (348)
T ss_dssp HHHCC--TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC--------------------CTT-----------C
T ss_pred hhCCC--CCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCC--------------------CCC-----------c
Confidence 98764 478999999999999999999999999764311 1110 000 0
Q ss_pred hcCcccCCCcccccccCCccc-c-ccCccHHHHHHHhhC
Q 047628 287 TSDTIVSDNALTFQDLGIVPH-K-LKGYPTEYLIWYRKG 323 (327)
Q Consensus 287 ~~~~~~~~~~~~~~~lg~~p~-~-~~~~l~~~~~~~~~~ 323 (327)
.....+++ +++++.|||+|+ + ++++++++++||+++
T Consensus 288 ~~~~~~d~-~k~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 288 DLRYAIDA-SKLRDELGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp CCBCCBCC-HHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred ccccccCH-HHHHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence 11233454 588888999997 7 999999999999875
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=293.43 Aligned_cols=277 Identities=16% Similarity=0.148 Sum_probs=222.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVI 81 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi 81 (327)
.++.|+|||||||||||++++++|+++|++|++++|+.+......... .+++++.+|++|++++.++++ ++|+||
T Consensus 17 ~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l---~~v~~~~~Dl~d~~~~~~~~~~~~~D~vi 93 (330)
T 2pzm_A 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV---AGLSVIEGSVTDAGLLERAFDSFKPTHVV 93 (330)
T ss_dssp TTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC---TTEEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc---CCceEEEeeCCCHHHHHHHHhhcCCCEEE
Confidence 355689999999999999999999999999999999765433211211 368899999999999999998 899999
Q ss_pred Ecccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------C-chHHHhHHHHHHHH
Q 047628 82 NLIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------P-SRVFSTKAAAEEAV 146 (327)
Q Consensus 82 ~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------~-~~y~~~K~~~E~~~ 146 (327)
|||+..... .... +++|+.++.+++++|++.+ +++||++||..++... + +.|+.+|.++|.++
T Consensus 94 h~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~ 171 (330)
T 2pzm_A 94 HSAAAYKDPDDWAED-AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFL 171 (330)
T ss_dssp ECCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHH
T ss_pred ECCccCCCccccChh-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHH
Confidence 999975431 1123 7899999999999999988 8999999998776432 3 68999999999999
Q ss_pred HhhCCCeEEEecCeeecCCC--hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHH-HHHHHhhcCCCCCCceEEecC
Q 047628 147 LRELPWATIMRPAAMIGTED--RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA-AVTAALKDDGTSMGKIYELGG 223 (327)
Q Consensus 147 ~~~~~~~~i~r~~~~~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~-~~~~~l~~~~~~~~~~~~v~~ 223 (327)
+.++++++++||+.+|||+. .++..+...+..+. ..++++. .+++++++|+|+ +++.+++++. +++||+++
T Consensus 172 ~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~~---g~~~~v~~ 245 (330)
T 2pzm_A 172 MMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ--KCFCSDT-VRDFLDMSDFLAIADLSLQEGRP---TGVFNVST 245 (330)
T ss_dssp HTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC--CCCEESC-EECEEEHHHHHHHHHHHTSTTCC---CEEEEESC
T ss_pred HHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC--EEeCCCC-EecceeHHHHHHHHHHHHhhcCC---CCEEEeCC
Confidence 99899999999999999975 45566655555444 4556666 899999999999 9999998743 78999999
Q ss_pred CccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCccc-----
Q 047628 224 PDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALT----- 298 (327)
Q Consensus 224 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 298 (327)
++.+|+.|+++.+.+.+|.+ .+...|.+ + ......+++. ++
T Consensus 246 ~~~~s~~e~~~~i~~~~g~~-~~~~~~~~--------------------~------------~~~~~~~d~~-k~~~~~l 291 (330)
T 2pzm_A 246 GEGHSIKEVFDVVLDYVGAT-LAEPVPVV--------------------A------------PGADDVPSVV-LDPSKTE 291 (330)
T ss_dssp SCCEEHHHHHHHHHHHHTCC-CSSCCCEE--------------------C------------CCTTSCSEEC-BCCHHHH
T ss_pred CCCCCHHHHHHHHHHHhCCC-CceeCCCC--------------------c------------chhhccCCHH-HHhhchH
Confidence 99999999999999999987 44444411 0 0112344443 77
Q ss_pred ccccCCccc-cccCccHHHHHHHhhCCCC
Q 047628 299 FQDLGIVPH-KLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 299 ~~~lg~~p~-~~~~~l~~~~~~~~~~g~~ 326 (327)
++ |||+|+ +++++++++++||+++|+.
T Consensus 292 ~~-lG~~p~~~~~~~l~~~~~~~~~~~~~ 319 (330)
T 2pzm_A 292 TE-FGWKAKVDFKDTITGQLAWYDKYGVT 319 (330)
T ss_dssp HH-HCCCCCCCHHHHHHHHHHHHHHHCSC
T ss_pred HH-cCCcccCCHHHHHHHHHHHHHhhCcc
Confidence 66 999996 9999999999999998874
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-40 Score=288.45 Aligned_cols=273 Identities=19% Similarity=0.162 Sum_probs=220.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~ 85 (327)
|+|||||||||||++++++|+++|++|++++|........+. .+++++.+|+++++++.++++ ++|+|||+|+
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 75 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP-----KGVPFFRVDLRDKEGVERAFREFRPTHVSHQAA 75 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC-----TTCCEECCCTTCHHHHHHHHHHHCCSEEEECCS
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc-----cCeEEEECCCCCHHHHHHHHHhcCCCEEEECcc
Confidence 589999999999999999999999999999986543222221 257889999999999999998 7999999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc-CCCCC--------------CCchHHHhHHHHHHHH
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL-GASSS--------------SPSRVFSTKAAAEEAV 146 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~-~v~~~--------------~~~~y~~~K~~~E~~~ 146 (327)
.... ..+...+++|+.++.+++++|++.+ +++||++||. .++.. ..+.|+.+|.++|.++
T Consensus 76 ~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 154 (311)
T 2p5y_A 76 QASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYL 154 (311)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred ccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHH
Confidence 7532 2345678999999999999999988 8999999997 43321 1268999999999998
Q ss_pred Hh----hCCCeEEEecCeeecCCC------hhHHHHHHHHhhcCceeee-----cCCCceecceeHHHHHHHHHHHhhcC
Q 047628 147 LR----ELPWATIMRPAAMIGTED------RLLNKWAQFVKKFNFFPLF-----GDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 147 ~~----~~~~~~i~r~~~~~G~~~------~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+. .+++++++||+.+||++. .++..+...+.++..+.++ +++.+.++++|++|+|++++.+++++
T Consensus 155 ~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~ 234 (311)
T 2p5y_A 155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL 234 (311)
T ss_dssp HHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC
Confidence 65 369999999999999863 3456666666667777777 88888999999999999999999864
Q ss_pred CCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcc
Q 047628 212 GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTI 291 (327)
Q Consensus 212 ~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (327)
+++||+++++.+|+.|+++.+.+.+|.+.++...|.. +.. .....
T Consensus 235 ----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------------~~~-----------~~~~~ 279 (311)
T 2p5y_A 235 ----EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR--------------------PGD-----------LERSV 279 (311)
T ss_dssp ----CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC--------------------TTC-----------CSBCC
T ss_pred ----CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC--------------------ccc-----------hhhcc
Confidence 5799999999999999999999999987665544410 000 01234
Q ss_pred cCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 292 VSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 292 ~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
++. +++++ |||+|+ +++++++++++||++.
T Consensus 280 ~d~-~k~~~-lg~~p~~~~~~~l~~~~~~~~~~ 310 (311)
T 2p5y_A 280 LSP-LKLMA-HGWRPKVGFQEGIRLTVDHFRGA 310 (311)
T ss_dssp BCC-HHHHT-TTCCCSSCHHHHHHHHHHHHHTC
T ss_pred CCH-HHHHH-CCCCCCCCHHHHHHHHHHHHHhh
Confidence 454 48888 999996 9999999999999863
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-41 Score=296.00 Aligned_cols=279 Identities=16% Similarity=0.131 Sum_probs=222.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
+++|+|||||||||||++++++|+++|++|++++|+.......+... ++++++.+|++|++++.+++++ +|+|||
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih 95 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH---PNLTFVEGSIADHALVNQLIGDLQPDAVVH 95 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC---TTEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc---CCceEEEEeCCCHHHHHHHHhccCCcEEEE
Confidence 34689999999999999999999999999999999865433323221 3688999999999999999988 999999
Q ss_pred cccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC----C----------CC-chHHHhHHHHHHH
Q 047628 83 LIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS----S----------SP-SRVFSTKAAAEEA 145 (327)
Q Consensus 83 ~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~----~----------~~-~~y~~~K~~~E~~ 145 (327)
+|+..... .... +++|+.++.+++++|++.+ +++||++||.+++. . .. +.|+.+|.++|.+
T Consensus 96 ~A~~~~~~~~~~~~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~ 173 (333)
T 2q1w_A 96 TAASYKDPDDWYND-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDY 173 (333)
T ss_dssp CCCCCSCTTCHHHH-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHH
T ss_pred CceecCCCccCChH-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHH
Confidence 99975431 1122 7899999999999999998 89999999988875 2 23 6899999999999
Q ss_pred HHh-hCCCeEEEecCeeecCCC--hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEec
Q 047628 146 VLR-ELPWATIMRPAAMIGTED--RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222 (327)
Q Consensus 146 ~~~-~~~~~~i~r~~~~~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~ 222 (327)
++. .. +++++||+.+||++. .++..+...+..+. .+++ ++..+++++++|+|++++.+++++. +++||++
T Consensus 174 ~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~---g~~~~v~ 246 (333)
T 2q1w_A 174 LEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGK--KCFV-TKARRDFVFVKDLARATVRAVDGVG---HGAYHFS 246 (333)
T ss_dssp HHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTC--CCEE-EECEECEEEHHHHHHHHHHHHTTCC---CEEEECS
T ss_pred HHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCC--eeeC-CCceEeeEEHHHHHHHHHHHHhcCC---CCEEEeC
Confidence 998 76 999999999999974 45666666555554 4555 6778999999999999999998754 6899999
Q ss_pred CCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCccccccc
Q 047628 223 GPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDL 302 (327)
Q Consensus 223 ~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 302 (327)
+++.+|+.|+++.+.+.+|.+ .+...|.+. .. ...+.....++. +++++.
T Consensus 247 ~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~------------~~---------------~~~~~~~~~~d~-~k~~~~- 296 (333)
T 2q1w_A 247 SGTDVAIKELYDAVVEAMALP-SYPEPEIRE------------LG---------------PDDAPSILLDPS-RTIQDF- 296 (333)
T ss_dssp CSCCEEHHHHHHHHHHHTTCS-SCCCCEEEE------------CC---------------TTSCCCCCBCCH-HHHHHH-
T ss_pred CCCCccHHHHHHHHHHHhCCC-CceeCCCCC------------cc---------------cccccccccCCH-HHHHhc-
Confidence 999999999999999999987 444443110 00 001123344554 488777
Q ss_pred CCccc-cccCccHHHHHHHhhCCC
Q 047628 303 GIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 303 g~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
||+|. +++++++++++||+++|.
T Consensus 297 G~~p~~~~~~~l~~~~~~~~~~~~ 320 (333)
T 2q1w_A 297 GKIEFTPLKETVAAAVAYFREYGV 320 (333)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCcCCCHHHHHHHHHHHHHHHCC
Confidence 99996 999999999999998874
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=295.47 Aligned_cols=286 Identities=15% Similarity=0.125 Sum_probs=224.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
+++|+|||||||||||++|+++|+++|++|++++|+++.............+++++.+|+++++++.+++++ +|+|||
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 86 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFH 86 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEE
Confidence 456899999999999999999999999999999998765432222111124688999999999999999987 899999
Q ss_pred cccccc----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----------C----CchHHHhHHHHHH
Q 047628 83 LIGREY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS----------S----PSRVFSTKAAAEE 144 (327)
Q Consensus 83 ~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~----------~----~~~y~~~K~~~E~ 144 (327)
+|+... ...+...+++|+.++.+++++|++.+.+++|||+||..++.. . .+.|+.+|..+|+
T Consensus 87 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~ 166 (357)
T 1rkx_A 87 MAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAEL 166 (357)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHH
T ss_pred CCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHH
Confidence 998632 233457889999999999999998754789999999865421 1 1789999999999
Q ss_pred HHHhh-------------CCCeEEEecCeeecCCC----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 145 AVLRE-------------LPWATIMRPAAMIGTED----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 145 ~~~~~-------------~~~~~i~r~~~~~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+++.+ +++++++||+.+||+++ .++..+...+.++..+.+ +++++.++++|++|+|++++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~a~~~~ 245 (357)
T 1rkx_A 167 VTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPLSGYLLL 245 (357)
T ss_dssp HHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHHHHHHH
Confidence 98764 79999999999999965 467777777776666655 4567889999999999999999
Q ss_pred hhc---C-CCCCCceEEecC--CccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHH
Q 047628 208 LKD---D-GTSMGKIYELGG--PDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD 281 (327)
Q Consensus 208 l~~---~-~~~~~~~~~v~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
++. . .. .+++||+++ ++.+|+.|+++.+.+.+|.+..+...+. . . |
T Consensus 246 ~~~~~~~~~~-~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--~-----------~------~-------- 297 (357)
T 1rkx_A 246 AQKLYTDGAE-YAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN--A-----------H------P-------- 297 (357)
T ss_dssp HHHHHHTCGG-GCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------------------------
T ss_pred HHhhhhcCCC-CCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCC--C-----------C------C--------
Confidence 875 2 23 478999997 4689999999999999998765432220 0 0 0
Q ss_pred HHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 282 EINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.......++. +++++.|||+|+ +++++++++++||+++
T Consensus 298 ---~~~~~~~~d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 336 (357)
T 1rkx_A 298 ---HEAHYLKLDC-SKAKMQLGWHPRWNLNTTLEYIVGWHKNW 336 (357)
T ss_dssp ----CCCCCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred ---cCcccccCCH-HHHHHHhCCCcCCcHHHHHHHHHHHHHHH
Confidence 0012334555 488889999997 9999999999999864
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=291.69 Aligned_cols=262 Identities=13% Similarity=0.081 Sum_probs=211.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-ccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-ANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~d~vi~~ 83 (327)
|++|+||||| +||||++|+++|+++|++|++++|+.+... ++++++.+|++|++.+.+++++ +|+|||+
T Consensus 1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~ 70 (286)
T 3gpi_A 1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP---------AGVQTLIADVTRPDTLASIVHLRPEILVYC 70 (286)
T ss_dssp -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC---------TTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc---------cCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence 3457999999 599999999999999999999999876632 3689999999999999999988 9999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHHhhC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVLREL 150 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~~~~ 150 (327)
|+... ..+...+++|+.++.+++++|++.+ +++|||+||.++++.. .+.|+.+|..+|++ +++
T Consensus 71 a~~~~-~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~- 146 (286)
T 3gpi_A 71 VAASE-YSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA- 146 (286)
T ss_dssp HHHHH-HC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG-
T ss_pred CCCCC-CCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc-
Confidence 98754 3456778899999999999999988 9999999998875432 17899999999999 877
Q ss_pred CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC--CCCCCceEEecCCcccc
Q 047628 151 PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD--GTSMGKIYELGGPDIFT 228 (327)
Q Consensus 151 ~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~--~~~~~~~~~v~~~~~~s 228 (327)
++++++||+.+||++... +...+.+ . ..+++++..++++|++|+|++++.+++++ .. .+++||+++++.+|
T Consensus 147 ~~~~ilR~~~v~G~~~~~---~~~~~~~-~--~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~-~~~~~~~~~~~~~s 219 (286)
T 3gpi_A 147 YSSTILRFSGIYGPGRLR---MIRQAQT-P--EQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAV-PERLYIVTDNQPLP 219 (286)
T ss_dssp SSEEEEEECEEEBTTBCH---HHHHTTC-G--GGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSC-CCSEEEECCSCCEE
T ss_pred CCeEEEecccccCCCchh---HHHHHHh-c--ccCCCcCceeEEEEHHHHHHHHHHHHhhhccCC-CCceEEEeCCCCCC
Confidence 999999999999998752 2233333 2 22367888999999999999999999985 33 58899999999999
Q ss_pred HHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-
Q 047628 229 VHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH- 307 (327)
Q Consensus 229 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~- 307 (327)
+.|+++.+++.+|.+..+...+ .......++. ++++ .|||+|+
T Consensus 220 ~~e~~~~i~~~~g~~~~~~~~~----------------------------------~~~~~~~~d~-~k~~-~lG~~p~~ 263 (286)
T 3gpi_A 220 VHDLLRWLADRQGIAYPAGATP----------------------------------PVQGNKKLSN-ARLL-ASGYQLIY 263 (286)
T ss_dssp HHHHHHHHHHHTTCCCCCSCCC----------------------------------CBCSSCEECC-HHHH-HTTCCCSS
T ss_pred HHHHHHHHHHHcCCCCCCCCCc----------------------------------ccCCCeEeeH-HHHH-HcCCCCcC
Confidence 9999999999999876543222 0022344555 4886 9999997
Q ss_pred -cccCccHHHHHHHhhC
Q 047628 308 -KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 308 -~~~~~l~~~~~~~~~~ 323 (327)
+++|+++++++|+...
T Consensus 264 ~~l~e~l~~~~~~~~~~ 280 (286)
T 3gpi_A 264 PDYVSGYGALLAAMREG 280 (286)
T ss_dssp CSHHHHHHHHHHHHTC-
T ss_pred CcHHHHHHHHHHHHhcc
Confidence 5999999999998764
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=292.31 Aligned_cols=266 Identities=17% Similarity=0.133 Sum_probs=217.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~ 82 (327)
|++|+|||||||||||++|+++|+++|++|+++.|+. .+|+++++++.++++ ++|+|||
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------~~D~~d~~~~~~~~~~~~~d~vih 61 (321)
T 1e6u_A 1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASERIDQVYL 61 (321)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------cCCccCHHHHHHHHHhcCCCEEEE
Confidence 3458999999999999999999999999999988752 369999999999998 8999999
Q ss_pred cccccc-----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----------------CC--chHHHhH
Q 047628 83 LIGREY-----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS----------------SP--SRVFSTK 139 (327)
Q Consensus 83 ~a~~~~-----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~----------------~~--~~y~~~K 139 (327)
+|+... ...+...+++|+.++.+++++|++.+ +++|||+||..++.. .| +.|+.+|
T Consensus 62 ~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 140 (321)
T 1e6u_A 62 AAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAK 140 (321)
T ss_dssp CCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHH
T ss_pred cCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccHHHH
Confidence 998753 23456788999999999999999998 899999999887632 22 4899999
Q ss_pred HHHHHHHHhh----CCCeEEEecCeeecCCC-------hhHHHHHHHHhh----c-CceeeecCCCceecceeHHHHHHH
Q 047628 140 AAAEEAVLRE----LPWATIMRPAAMIGTED-------RLLNKWAQFVKK----F-NFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 140 ~~~E~~~~~~----~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
..+|++++.+ +++++++||+.+||++. .++..+...+.. + ..+.++++++..++++|++|+|++
T Consensus 141 ~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~ 220 (321)
T 1e6u_A 141 IAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAA 220 (321)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHH
Confidence 9999999874 79999999999999965 355666655543 2 567778889999999999999999
Q ss_pred HHHHhhcCCCC-------CCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCC
Q 047628 204 VTAALKDDGTS-------MGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPG 276 (327)
Q Consensus 204 ~~~~l~~~~~~-------~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (327)
++.+++++... .+++||+++++.+|+.|+++.+.+.+|.+.++...+. .|.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------~~~-- 278 (321)
T 1e6u_A 221 SIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDAS--------------------KPD-- 278 (321)
T ss_dssp HHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETT--------------------SCC--
T ss_pred HHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCC--------------------CCC--
Confidence 99999876530 2589999999999999999999999998766544431 000
Q ss_pred CCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 277 LFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
......++. +++++ |||+|+ +++++++++++||+++
T Consensus 279 ---------~~~~~~~d~-~k~~~-lG~~p~~~~~~~l~~~~~~~~~~ 315 (321)
T 1e6u_A 279 ---------GTPRKLLDV-TRLHQ-LGWYHEISLEAGLASTYQWFLEN 315 (321)
T ss_dssp ---------CCSBCCBCC-HHHHH-TTCCCCCCHHHHHHHHHHHHHHT
T ss_pred ---------CcccccCCH-HHHHh-cCCccCCcHHHHHHHHHHHHHHH
Confidence 011234555 48888 999997 9999999999999875
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=296.30 Aligned_cols=293 Identities=16% Similarity=0.143 Sum_probs=224.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh-hHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~d~vi~~a~ 85 (327)
|+|||||||||||++++++|+++ |++|++++|++++...... ..+++++.+|++++ +.+.++++++|+|||||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~d~vih~A~ 76 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA 76 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTT----CTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhc----CCCeEEEeccccCcHHHHHhhccCCCEEEEccc
Confidence 58999999999999999999998 8999999998755322111 14689999999984 578888999999999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC---------------C-----chHHHhHHH
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS---------------P-----SRVFSTKAA 141 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~---------------~-----~~y~~~K~~ 141 (327)
.... ..+...+++|+.++.+++++|++.+ ++|||+||.+++... | +.|+.+|..
T Consensus 77 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~ 154 (345)
T 2bll_A 77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQL 154 (345)
T ss_dssp CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHH
T ss_pred ccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHH
Confidence 7532 2445678899999999999999987 799999997764221 1 379999999
Q ss_pred HHHHHHh----hCCCeEEEecCeeecCCC-----------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 142 AEEAVLR----ELPWATIMRPAAMIGTED-----------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 142 ~E~~~~~----~~~~~~i~r~~~~~G~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+|++++. .+++++++||+.+||++. ..+..+...+..+..+.+++++++.++++|++|+|++++.
T Consensus 155 ~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 234 (345)
T 2bll_A 155 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR 234 (345)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHH
Confidence 9999865 369999999999999964 2456666666777778788888899999999999999999
Q ss_pred HhhcCC--CCCCceEEecCCc-cccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHH
Q 047628 207 ALKDDG--TSMGKIYELGGPD-IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEI 283 (327)
Q Consensus 207 ~l~~~~--~~~~~~~~v~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (327)
+++++. . .+++||+++++ .+|+.|+++.+.+.+|.+.....+|.+....... .... . ....
T Consensus 235 ~~~~~~~~~-~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~----~~~~----------~-~~~~ 298 (345)
T 2bll_A 235 IIENAGNRC-DGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVE----SSSY----------Y-GKGY 298 (345)
T ss_dssp HHHCGGGTT-TTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------------------
T ss_pred HHhhccccC-CCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCcccccccccc----chhh----------c-cccc
Confidence 998764 3 57899999986 8999999999999999876554444221100000 0000 0 0000
Q ss_pred HhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 284 NAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
.. .....++. +++++.|||+|+ +++++++++++||+++.
T Consensus 299 ~~-~~~~~~d~-~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~ 338 (345)
T 2bll_A 299 QD-VEHRKPSI-RNAHRCLDWEPKIDMQETIDETLDFFLRTV 338 (345)
T ss_dssp ---CCCCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHHHS
T ss_pred cc-hhhhcccH-HHHHHhcCCCccccHHHHHHHHHHHHHHcC
Confidence 00 12334454 588889999997 99999999999998754
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=288.64 Aligned_cols=262 Identities=13% Similarity=0.093 Sum_probs=217.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a 84 (327)
+|+|||||||||||+++++.|+++|++|++++|. ++|++|++.+.++++ ++|+|||+|
T Consensus 5 ~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~D~~d~~~~~~~~~~~~~d~vi~~a 64 (287)
T 3sc6_A 5 KERVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------LLDITNISQVQQVVQEIRPHIIIHCA 64 (287)
T ss_dssp CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------TSCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred eeEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------ccCCCCHHHHHHHHHhcCCCEEEECC
Confidence 3699999999999999999999999999999982 378999999999998 599999999
Q ss_pred ccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHH
Q 047628 85 GREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVL 147 (327)
Q Consensus 85 ~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~ 147 (327)
+.... ..+...+++|+.++.+++++|++.+ + +|||+||..++... .+.|+.+|..+|++++
T Consensus 65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 142 (287)
T 3sc6_A 65 AYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVK 142 (287)
T ss_dssp CCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred cccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 97543 3456788999999999999999998 7 79999998776332 1789999999999999
Q ss_pred hhCCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcc
Q 047628 148 RELPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI 226 (327)
Q Consensus 148 ~~~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~ 226 (327)
.++.+++++||+.+||+.. +++..+...+..++.+.+.++ +.++++|++|+|++++.+++++. +++||+++++.
T Consensus 143 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~Dva~~~~~~~~~~~---~~~~~i~~~~~ 217 (287)
T 3sc6_A 143 ELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVVAD--QIGSPTYVADLNVMINKLIHTSL---YGTYHVSNTGS 217 (287)
T ss_dssp HHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEECS--CEECCEEHHHHHHHHHHHHTSCC---CEEEECCCBSC
T ss_pred HhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEeecC--cccCceEHHHHHHHHHHHHhCCC---CCeEEEcCCCc
Confidence 9999999999999999854 567777777777777887754 78999999999999999999875 56999999999
Q ss_pred ccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCcc
Q 047628 227 FTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVP 306 (327)
Q Consensus 227 ~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p 306 (327)
+|+.|+++.+++.+|.+..+.+++.+... .. ... .....++. ++++ .|||.|
T Consensus 218 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----------~~----~~~------------~~~~~~d~-~k~~-~lg~~p 269 (287)
T 3sc6_A 218 CSWFEFAKKIFSYANMKVNVLPVSTEEFG----------AA----AAR------------PKYSIFQH-NMLR-LNGFLQ 269 (287)
T ss_dssp EEHHHHHHHHHHHHTCCCEEEEECHHHHC----------CS----SCC------------CSBCCBCC-HHHH-HTTCCC
T ss_pred ccHHHHHHHHHHHcCCCcceeeeehhhcC----------cc----cCC------------CCcccccH-HHHH-hhCCCC
Confidence 99999999999999998887777732210 00 000 11234454 4777 899998
Q ss_pred c-cccCccHHHHHHHhhC
Q 047628 307 H-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 307 ~-~~~~~l~~~~~~~~~~ 323 (327)
. +++++++++++|++++
T Consensus 270 ~~~~~~~l~~~~~~~~~~ 287 (287)
T 3sc6_A 270 MPSWEEGLERFFIETKSH 287 (287)
T ss_dssp CCBHHHHHHHHHHHTC--
T ss_pred CccHHHHHHHHHHHHhcC
Confidence 6 9999999999998764
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=295.39 Aligned_cols=284 Identities=16% Similarity=0.110 Sum_probs=220.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHH-hCCCEEEEeeCCCCCc--------hhhh----cccCC---CCC---eeEEeeCCCCh
Q 047628 7 GIIATVFGTTGFLGRYVVQQLA-KMGSQVLVPFRGCEDD--------PRHL----KLMGD---LGQ---IVPMKFNPRDD 67 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll-~~g~~V~~~~R~~~~~--------~~~~----~~~~~---~~~---v~~~~~Dl~~~ 67 (327)
.|+|||||||||||++++++|+ ++|++|++++|+.... ...+ ..... ..+ ++++.+|++++
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4689999999999999999999 9999999999976542 1222 11110 023 88999999999
Q ss_pred hHHHHHhc--c-ccEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC---------
Q 047628 68 NTIKATMA--K-ANVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------- 131 (327)
Q Consensus 68 ~~~~~~~~--~-~d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------- 131 (327)
+.+.++++ + +|+|||+|+.... ..+...+++|+.++.+++++|++.+ +++|||+||.+++...
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccccc
Confidence 99999997 6 9999999997532 2445688999999999999999998 8999999998775321
Q ss_pred -----------CchHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC------------hhHHHHH----HHHhhc-
Q 047628 132 -----------PSRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED------------RLLNKWA----QFVKKF- 179 (327)
Q Consensus 132 -----------~~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~------------~~~~~~~----~~~~~~- 179 (327)
.+.|+.+|.++|.+++.+ +++++++||+.+||+.. .++..+. ..+..+
T Consensus 161 ~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
T 1gy8_A 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (397)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred cCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhcC
Confidence 278999999999998764 69999999999999852 2444444 122222
Q ss_pred -----------Cceeeec------CCCceecceeHHHHHHHHHHHhhcCCCCC----C---ceEEecCCccccHHHHHHH
Q 047628 180 -----------NFFPLFG------DGSTRIQPVYVVDVAAAVTAALKDDGTSM----G---KIYELGGPDIFTVHELAEL 235 (327)
Q Consensus 180 -----------~~~~~~~------~~~~~~~~i~~~D~a~~~~~~l~~~~~~~----~---~~~~v~~~~~~s~~el~~~ 235 (327)
..+.++| ++++.++++|++|+|++++.+++.+.... + ++||+++++.+|+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~ 320 (397)
T 1gy8_A 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV 320 (397)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred ccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHHHHHH
Confidence 2466766 67889999999999999999998654301 3 7999999999999999999
Q ss_pred HHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc--cccCcc
Q 047628 236 MYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH--KLKGYP 313 (327)
Q Consensus 236 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~--~~~~~l 313 (327)
+.+.+|.+.++...+. .+.. .....++. +++++.|||+|+ ++++++
T Consensus 321 i~~~~g~~~~~~~~~~--------------------~~~~-----------~~~~~~d~-~k~~~~lG~~p~~~~l~e~l 368 (397)
T 1gy8_A 321 ARKTTGHPIPVRECGR--------------------REGD-----------PAYLVAAS-DKAREVLGWKPKYDTLEAIM 368 (397)
T ss_dssp HHHHHCCCCCEEEECC--------------------CTTC-----------CSEECBCC-HHHHHHTCCCCSCCSHHHHH
T ss_pred HHHHhCCCCCeeeCCC--------------------CCCc-----------ccccccCH-HHHHHHhCCCCCcCCHHHHH
Confidence 9999998766544431 0000 01234454 588889999998 899999
Q ss_pred HHHHHHHhhC
Q 047628 314 TEYLIWYRKG 323 (327)
Q Consensus 314 ~~~~~~~~~~ 323 (327)
+++++||+++
T Consensus 369 ~~~~~~~~~~ 378 (397)
T 1gy8_A 369 ETSWKFQRTH 378 (397)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhc
Confidence 9999999887
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=288.85 Aligned_cols=285 Identities=15% Similarity=0.053 Sum_probs=218.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
++|+|||||||||||++++++|+++|++|++++|+++... ..+......++++++.+|+++++++.+++++ +|+|||
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih 92 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYN 92 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 4689999999999999999999999999999999876521 1122111123688999999999999999986 599999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCc-ceEEEEeccCCCCCC-------------CchHHHhHHHHHH
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGI-MRFIQISCLGASSSS-------------PSRVFSTKAAAEE 144 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v-~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~ 144 (327)
||+.... ..+...+++|+.++.+++++|++.+ + ++|||+||.+++... .+.|+.+|.++|.
T Consensus 93 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~ 171 (335)
T 1rpn_A 93 LAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHW 171 (335)
T ss_dssp CCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred CccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHH
Confidence 9997542 3445688999999999999999987 7 899999998765321 1689999999999
Q ss_pred HHHhh----CCCeEEEecCeeecCCCh--h----HHHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 145 AVLRE----LPWATIMRPAAMIGTEDR--L----LNKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 145 ~~~~~----~~~~~i~r~~~~~G~~~~--~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+++.+ +++++++||+.+||++.. + +..+...+..+. ....++++++.++++|++|+|++++.+++++.
T Consensus 172 ~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~- 250 (335)
T 1rpn_A 172 ITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDK- 250 (335)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSS-
T ss_pred HHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcCC-
Confidence 98764 699999999999998642 2 334444444444 33456888999999999999999999998764
Q ss_pred CCCceEEecCCccccHHHHHHHHHHHhhcCCcc-ccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCccc
Q 047628 214 SMGKIYELGGPDIFTVHELAELMYDTIREYPHY-VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV 292 (327)
Q Consensus 214 ~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (327)
+++||+++++.+|+.|+++.+.+.+|.+... ..++. ... .|. ......+
T Consensus 251 --~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~~---~~~-----------~~~~~~~ 300 (335)
T 1rpn_A 251 --ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDP--------------AFF---RPA-----------EVDVLLG 300 (335)
T ss_dssp --CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECG--------------GGC---CSS-----------CCCBCCB
T ss_pred --CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccc--------------ccc---CCC-----------cchhhcC
Confidence 3799999999999999999999999976321 11110 000 000 0112334
Q ss_pred CCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 293 SDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 293 ~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
+. +++++.|||+|+ +++++++++++||++.
T Consensus 301 d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 331 (335)
T 1rpn_A 301 NP-AKAQRVLGWKPRTSLDELIRMMVEADLRR 331 (335)
T ss_dssp CT-HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred CH-HHHHHhcCCCcCCCHHHHHHHHHHHHHHh
Confidence 44 588889999997 9999999999999863
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-40 Score=284.93 Aligned_cols=262 Identities=17% Similarity=0.137 Sum_probs=216.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a 84 (327)
.++|||||||||||++++++|+++|++|++++|+ .+|+++++++.++++ ++|+|||||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~~~d~vih~A 71 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------DLDITNVLAVNKFFNEKKPNVVINCA 71 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred cceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------cCCCCCHHHHHHHHHhcCCCEEEECC
Confidence 5799999999999999999999999999999985 368999999999998 799999999
Q ss_pred ccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHH
Q 047628 85 GREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVL 147 (327)
Q Consensus 85 ~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~ 147 (327)
+.... ..+...+++|+.++.+++++|++.+ + +|||+||..++... .+.|+.+|..+|++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~ 149 (292)
T 1vl0_A 72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVK 149 (292)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 97542 3445788999999999999999998 7 99999998765321 2689999999999999
Q ss_pred hhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccc
Q 047628 148 RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 148 ~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~ 227 (327)
.++.+++++||+.+||++.+++..+...+..+..+.+.+ ++.++++|++|+|++++.+++++ . +++||+++++.+
T Consensus 150 ~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~-~--~~~~~i~~~~~~ 224 (292)
T 1vl0_A 150 ALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEK-N--YGTFHCTCKGIC 224 (292)
T ss_dssp HHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHT-C--CEEEECCCBSCE
T ss_pred hhCCCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeec--CeeeCCccHHHHHHHHHHHHhcC-C--CcEEEecCCCCc
Confidence 998999999999999995566677766666676666665 47899999999999999999886 4 689999999999
Q ss_pred cHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc
Q 047628 228 TVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307 (327)
Q Consensus 228 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~ 307 (327)
|+.|+++.+.+.+|.+..+.++|.+.. . .+.. ......++. +++++.|||+|+
T Consensus 225 s~~e~~~~i~~~~g~~~~~~~~~~~~~--------------~--~~~~----------~~~~~~~d~-~k~~~~lG~~p~ 277 (292)
T 1vl0_A 225 SWYDFAVEIFRLTGIDVKVTPCTTEEF--------------P--RPAK----------RPKYSVLRN-YMLELTTGDITR 277 (292)
T ss_dssp EHHHHHHHHHHHHCCCCEEEEECSTTS--------------C--CSSC----------CCSBCCBCC-HHHHHTTCCCCC
T ss_pred cHHHHHHHHHHHhCCCCceeecccccc--------------C--cccC----------CCccccccH-HHHHHHcCCCCC
Confidence 999999999999998876655552110 0 0000 011234555 588889999999
Q ss_pred cccCccHHHHHHHhh
Q 047628 308 KLKGYPTEYLIWYRK 322 (327)
Q Consensus 308 ~~~~~l~~~~~~~~~ 322 (327)
+++++++++++||++
T Consensus 278 ~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 278 EWKESLKEYIDLLQM 292 (292)
T ss_dssp BHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHhcC
Confidence 999999999999974
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=286.94 Aligned_cols=289 Identities=16% Similarity=0.184 Sum_probs=225.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCC-CchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCE-DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~ 83 (327)
|+|||||||||||++++++|++. |++|++++|+.. .....+......++++++.+|+++++++.++++ ++|+||||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 57999999999999999999998 799999999763 222222222112468999999999999999998 89999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHc--CCcc-------eEEEEeccCCCCC--------------------
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEH--GGIM-------RFIQISCLGASSS-------------------- 130 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~--~~v~-------~~v~~Ss~~v~~~-------------------- 130 (327)
|+.... ......+++|+.++.+++++|++. + ++ +|||+||..++..
T Consensus 81 A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~ 159 (361)
T 1kew_A 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETT 159 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTS
T ss_pred CCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCC
Confidence 997532 345678899999999999999988 7 77 9999999765421
Q ss_pred ---CCchHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 131 ---SPSRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 131 ---~~~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
..+.|+.+|.++|.+++.+ +++++++||+.+||+.. .++..+...+..+..+++++++...++++|++|+
T Consensus 160 ~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 239 (361)
T 1kew_A 160 AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDH 239 (361)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHH
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHH
Confidence 1278999999999998764 69999999999999964 3556666666667778888888999999999999
Q ss_pred HHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCH
Q 047628 201 AAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL 280 (327)
Q Consensus 201 a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (327)
|++++.+++.+. .|++||+++++.+|+.|+++.+++.+|.+.+... |.. ....+ .+..+ .
T Consensus 240 a~a~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~-p~~-------------~~~~~-~~~~~---~ 299 (361)
T 1kew_A 240 ARALHMVVTEGK--AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKAT-SYR-------------EQITY-VADRP---G 299 (361)
T ss_dssp HHHHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSS-CGG-------------GGEEE-ECCCT---T
T ss_pred HHHHHHHHhCCC--CCCEEEecCCCeeeHHHHHHHHHHHhCCcCcccc-ccc-------------cceee-cCCCC---c
Confidence 999999998764 4789999999999999999999999997644221 210 00000 00000 0
Q ss_pred HHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 281 DEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
......++. +++++.|||+|+ +++++++++++||+++
T Consensus 300 -----~~~~~~~d~-~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 300 -----HDRRYAIDA-GKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp -----CCCBCCBCC-HHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred -----ccceeecCH-HHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 011234454 588888999996 9999999999999875
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-39 Score=285.33 Aligned_cols=277 Identities=16% Similarity=0.153 Sum_probs=219.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+++|+|||||||||||++|+++|+++|++|++++|+.......+..+....+++++.+|+.++ .+.++|+|||||
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-----~~~~~d~vih~A 99 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP-----LYIEVDQIYHLA 99 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC-----CCCCCSEEEECC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCCh-----hhcCCCEEEECc
Confidence 456899999999999999999999999999999997654333332222224689999999875 357899999999
Q ss_pred ccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC--------------CC----chHHHhHHHH
Q 047628 85 GREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS--------------SP----SRVFSTKAAA 142 (327)
Q Consensus 85 ~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~--------------~~----~~y~~~K~~~ 142 (327)
+.... ..+...+++|+.++.+++++|++.+ + +|||+||.+++.. .| +.|+.+|..+
T Consensus 100 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~ 177 (343)
T 2b69_A 100 SPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVA 177 (343)
T ss_dssp SCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHH
T ss_pred cccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHH
Confidence 87532 2345678899999999999999998 6 9999999876521 12 5699999999
Q ss_pred HHHHHh----hCCCeEEEecCeeecCCC-----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLR----ELPWATIMRPAAMIGTED-----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~----~~~~~~i~r~~~~~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
|++++. .+++++++||+.+||++. ..+..+...+..++.+.++++++..++++|++|+|++++.+++.+.
T Consensus 178 E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~- 256 (343)
T 2b69_A 178 ETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV- 256 (343)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC-
T ss_pred HHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC-
Confidence 999865 369999999999999963 3566666666677778888889999999999999999999998653
Q ss_pred CCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccC
Q 047628 214 SMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293 (327)
Q Consensus 214 ~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (327)
+++||+++++.+|+.|+++.+.+.+|.+.++..+|.+ +.. ......+
T Consensus 257 --~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------------------~~~-----------~~~~~~d 303 (343)
T 2b69_A 257 --SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA--------------------QDD-----------PQKRKPD 303 (343)
T ss_dssp --CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC--------------------TTC-----------CCCCCBC
T ss_pred --CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCC--------------------CCC-----------CceecCC
Confidence 5799999999999999999999999987766555411 000 0123344
Q ss_pred CCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 294 DNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 294 ~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
. +++++.|||+|+ +++|+++++++||++.
T Consensus 304 ~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 333 (343)
T 2b69_A 304 I-KKAKLMLGWEPVVPLEEGLNKAIHYFRKE 333 (343)
T ss_dssp C-HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 4 588889999996 9999999999999864
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=287.44 Aligned_cols=270 Identities=16% Similarity=0.141 Sum_probs=217.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~ 85 (327)
|+|||||||||||++++++|+ +|++|++++|++. .+.+|+++++++.+++++ +|+|||+|+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~ 63 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKLRPDVIVNAAA 63 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhcCCCEEEECcc
Confidence 589999999999999999999 8999999999752 247899999999999987 999999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHHh
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVLR 148 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~~ 148 (327)
.... ..+...+++|+.++.+++++|++.+ + +|||+||.+++... .+.|+.+|..+|++++.
T Consensus 64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~ 141 (299)
T 1n2s_A 64 HTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (299)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred cCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHH
Confidence 7542 3456788999999999999999998 7 89999998775321 26899999999999999
Q ss_pred hCCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CC-CCceEEecCCc
Q 047628 149 ELPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TS-MGKIYELGGPD 225 (327)
Q Consensus 149 ~~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~-~~~~~~v~~~~ 225 (327)
+..+++++||+.+||++. +++..+...+..+..+...+ ++.++++|++|+|++++.+++++. .. .+++||+++++
T Consensus 142 ~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~i~~~~ 219 (299)
T 1n2s_A 142 NCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHLVAGG 219 (299)
T ss_dssp HCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEECCCBS
T ss_pred hCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccccccCceEEEeCCC
Confidence 888999999999999965 46666777777777777665 478999999999999999998762 10 26899999999
Q ss_pred cccHHHHHHHHHHHhhcCC------ccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccc
Q 047628 226 IFTVHELAELMYDTIREYP------HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299 (327)
Q Consensus 226 ~~s~~el~~~i~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (327)
.+|+.|+++.+.+.+|.+. .+.+.+.+ . .+.+ . .......++. ++++
T Consensus 220 ~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~--------------~----~~~~--~------~~~~~~~~d~-~k~~ 272 (299)
T 1n2s_A 220 TTTWHDYAALVFDEARKAGITLALTELNAVPTS--------------A----YPTP--A------SRPGNSRLNT-EKFQ 272 (299)
T ss_dssp CEEHHHHHHHHHHHHHHHTCCCCCCEEEEECST--------------T----SCCS--S------CCCSBCCBCC-HHHH
T ss_pred CCCHHHHHHHHHHHhCCCccccccccccccccc--------------c----ccCc--C------CCCCceeeeH-HHHH
Confidence 9999999999999999763 22222210 0 0000 0 0012344555 5888
Q ss_pred cccCCccccccCccHHHHHHHhhCCC
Q 047628 300 QDLGIVPHKLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 300 ~~lg~~p~~~~~~l~~~~~~~~~~g~ 325 (327)
+.|||+|++++|+++++++||++.+.
T Consensus 273 ~~lG~~p~~~~~~l~~~~~~~~~~~~ 298 (299)
T 1n2s_A 273 RNFDLILPQWELGVKRMLTEMFTTTT 298 (299)
T ss_dssp HHHTCCCCBHHHHHHHHHHHHHSCCC
T ss_pred HhcCCCCCCHHHHHHHHHHHHHhcCC
Confidence 89999999999999999999998764
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=286.23 Aligned_cols=275 Identities=15% Similarity=0.085 Sum_probs=215.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~ 82 (327)
+|+|||||||||||++|+++|+++ |++|++++|+++... +. ++++++.+|++|++++.++++ ++|+|||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~-----~~~~~~~~D~~d~~~~~~~~~~~~~d~vih 74 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VV-----NSGPFEVVNALDFNQIEHLVEVHKITDIYL 74 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HH-----HSSCEEECCTTCHHHHHHHHHHTTCCEEEE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--cc-----CCCceEEecCCCHHHHHHHHhhcCCCEEEE
Confidence 478999999999999999999998 899999999876532 11 247889999999999999998 8999999
Q ss_pred ccccccc---cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------CchHHHhHHHHHHH
Q 047628 83 LIGREYE---TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------PSRVFSTKAAAEEA 145 (327)
Q Consensus 83 ~a~~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~~~y~~~K~~~E~~ 145 (327)
+|+.... ..+...+++|+.++.+++++|++.+ +++|||+||.+++... .+.|+.+|.++|++
T Consensus 75 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~ 153 (312)
T 2yy7_A 75 MAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERW 153 (312)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHH
T ss_pred CCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHH
Confidence 9987542 3456788999999999999999998 8999999998775431 26899999999999
Q ss_pred HHhh----CCCeEEEecCeeecCC----C---h-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 146 VLRE----LPWATIMRPAAMIGTE----D---R-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 146 ~~~~----~~~~~i~r~~~~~G~~----~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
++.+ +++++++||+.+||+. . . ....+...+. .+.+..++++++.++++|++|+|++++.+++++..
T Consensus 154 ~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 232 (312)
T 2yy7_A 154 CEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIA-DKKYECFLSSETKMPMMYMDDAIDATINIMKAPVE 232 (312)
T ss_dssp HHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHH-TSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGG
T ss_pred HHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHc-CCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccc
Confidence 8764 6999999999999963 2 1 3334444343 45566778888999999999999999999987653
Q ss_pred C--CCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcc
Q 047628 214 S--MGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTI 291 (327)
Q Consensus 214 ~--~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (327)
. .+++||+++ +.+|+.|+++.+.+.+|. ..+...|. .+..... .....
T Consensus 233 ~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~---------------------------~~~~~~~-~~~~~ 282 (312)
T 2yy7_A 233 KIKIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPD---------------------------FRQKIAD-SWPAS 282 (312)
T ss_dssp GCCCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCC---------------------------THHHHHT-TSCSS
T ss_pred ccccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccC---------------------------ccccccc-ccccc
Confidence 1 147999997 899999999999999872 22222221 0111110 11234
Q ss_pred cCCCcccccccCCccc-cccCccHHHHHHHh
Q 047628 292 VSDNALTFQDLGIVPH-KLKGYPTEYLIWYR 321 (327)
Q Consensus 292 ~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~ 321 (327)
++. +++++.|||+|+ +++|+++++++||+
T Consensus 283 ~d~-~k~~~~lG~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 283 IDD-SQAREDWDWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp BCC-HHHHHHHCCCCCCCHHHHHHHHHHHHC
T ss_pred CCH-HHHHHHcCCCCCCCHHHHHHHHHHHhC
Confidence 555 488889999998 99999999999985
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-39 Score=284.16 Aligned_cols=283 Identities=17% Similarity=0.182 Sum_probs=215.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh---cccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL---KLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
|+|||||||||||++++++|+++|++|++++|........+ .... ..+++++.+|+++++++.+++++ +|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih 79 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDHAIDTVIH 79 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhccCCCEEEE
Confidence 58999999999999999999999999999987543322111 1110 13578899999999999998874 899999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-------------C-CchHHHhHHHHHH
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------S-PSRVFSTKAAAEE 144 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------~-~~~y~~~K~~~E~ 144 (327)
+|+.... ..+...+++|+.++.++++++++.+ +++||++||..++.. . .+.|+.+|.++|+
T Consensus 80 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~ 158 (338)
T 1udb_A 80 FAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQ 158 (338)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHH
T ss_pred CCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHH
Confidence 9986432 2345678999999999999999988 899999999876521 1 2689999999999
Q ss_pred HHHhh-----CCCeEEEecCeeecCC-------------ChhHHHHHHHHh-hcCceeeec------CCCceecceeHHH
Q 047628 145 AVLRE-----LPWATIMRPAAMIGTE-------------DRLLNKWAQFVK-KFNFFPLFG------DGSTRIQPVYVVD 199 (327)
Q Consensus 145 ~~~~~-----~~~~~i~r~~~~~G~~-------------~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~i~~~D 199 (327)
+++.+ +++++++||+.+||+. ..++..+..... ..+.+.+++ ++++.++++|++|
T Consensus 159 ~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D 238 (338)
T 1udb_A 159 ILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMD 238 (338)
T ss_dssp HHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHH
T ss_pred HHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHH
Confidence 98764 5899999999999873 123444444443 234455554 4678899999999
Q ss_pred HHHHHHHHhhcCC-CCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCC
Q 047628 200 VAAAVTAALKDDG-TSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLF 278 (327)
Q Consensus 200 ~a~~~~~~l~~~~-~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (327)
+|++++.+++... ...+++||+++++.+|+.|+++.+.+.+|.+.++...+. .+..
T Consensus 239 va~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~--------------------~~~~--- 295 (338)
T 1udb_A 239 LADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR--------------------REGD--- 295 (338)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECC--------------------CTTC---
T ss_pred HHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCC--------------------CCCc---
Confidence 9999999998642 202479999999999999999999999998766544330 0000
Q ss_pred CHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 279 NLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
.....++. +++++.|||+|+ +++++++++++|++++.
T Consensus 296 --------~~~~~~d~-~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~ 333 (338)
T 1udb_A 296 --------LPAYWADA-SKADRELNWRVTRTLDEMAQDTWHWQSRHP 333 (338)
T ss_dssp --------CSBCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred --------hhhhhcCH-HHHHHHcCCCcCCCHHHHHHHHHHHHHhcc
Confidence 01233444 588889999997 99999999999998763
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-39 Score=294.04 Aligned_cols=284 Identities=15% Similarity=0.136 Sum_probs=220.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch----------------hhhccc--CCCCCeeEEeeCCCCh
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP----------------RHLKLM--GDLGQIVPMKFNPRDD 67 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~----------------~~~~~~--~~~~~v~~~~~Dl~~~ 67 (327)
.+++|||||||||||++|+++|+++|++|++++|...... ..+... ....+++++.+|++++
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~ 89 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 89 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence 4689999999999999999999999999999988643210 011100 0013688999999999
Q ss_pred hHHHHHhcc--ccEEEEccccccc----cCcc---hhHhhhhHHHHHHHHHHHHcCCc-ceEEEEeccCCCCC-------
Q 047628 68 NTIKATMAK--ANVVINLIGREYE----TRNY---SFEDVNHFMAERIAGIAKEHGGI-MRFIQISCLGASSS------- 130 (327)
Q Consensus 68 ~~~~~~~~~--~d~vi~~a~~~~~----~~~~---~~~~~n~~~~~~l~~a~~~~~~v-~~~v~~Ss~~v~~~------- 130 (327)
+++.+++++ +|+|||+|+.... ..+. ..+++|+.++.+++++|++.+ + ++||++||.+++..
T Consensus 90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~E 168 (404)
T 1i24_A 90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPNIDIEE 168 (404)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCSSCBCS
T ss_pred HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCCCCCCc
Confidence 999999988 9999999987532 1221 367899999999999999988 7 59999999876532
Q ss_pred ------------------C-CchHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC--------------------h
Q 047628 131 ------------------S-PSRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED--------------------R 167 (327)
Q Consensus 131 ------------------~-~~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~--------------------~ 167 (327)
. .+.|+.+|.++|.+++.+ +++++++||+.+||+++ .
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~ 248 (404)
T 1i24_A 169 GYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT 248 (404)
T ss_dssp SEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred cccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchhh
Confidence 1 168999999999988764 79999999999999964 3
Q ss_pred hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC--ceEEecCCccccHHHHHHHHHHH---hhc
Q 047628 168 LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG--KIYELGGPDIFTVHELAELMYDT---IRE 242 (327)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~--~~~~v~~~~~~s~~el~~~i~~~---~g~ 242 (327)
.+..+...+..++.+.+++++++.++++|++|+|++++.+++++.. .| ++||+++ +.+|+.|+++.+++. +|.
T Consensus 249 ~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~-~g~~~~yni~~-~~~s~~e~~~~i~~~~~~~g~ 326 (404)
T 1i24_A 249 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK-AGEFRVFNQFT-EQFSVNELASLVTKAGSKLGL 326 (404)
T ss_dssp HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC-TTCEEEEEECS-EEEEHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCccc-CCCceEEEECC-CCCcHHHHHHHHHHHHHhhCC
Confidence 5677777777787787889999999999999999999999998764 45 7999998 899999999999998 677
Q ss_pred CCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHh
Q 047628 243 YPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYR 321 (327)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~ 321 (327)
+..+...|.+. + ........++. ++++ .|||+|+ +++++++++++|++
T Consensus 327 ~~~~~~~p~~~-------------------~----------~~~~~~~~~d~-~k~~-~LG~~p~~~~~~~l~~~~~~~~ 375 (404)
T 1i24_A 327 DVKKMTVPNPR-------------------V----------EAEEHYYNAKH-TKLM-ELGLEPHYLSDSLLDSLLNFAV 375 (404)
T ss_dssp CCCEEEECCSS-------------------C----------SCSSCCCCBCC-CHHH-HTTCCCCCCCHHHHHHHHHHHH
T ss_pred CccccccCccc-------------------C----------ccccceEecCH-HHHH-HcCCCcCcCHHHHHHHHHHHHH
Confidence 66554444100 0 00011233454 4776 7999998 89999999999986
Q ss_pred hC
Q 047628 322 KG 323 (327)
Q Consensus 322 ~~ 323 (327)
..
T Consensus 376 ~~ 377 (404)
T 1i24_A 376 QF 377 (404)
T ss_dssp HT
T ss_pred hh
Confidence 53
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=277.92 Aligned_cols=280 Identities=19% Similarity=0.184 Sum_probs=216.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|+|||||||||||++++++|+++ |++|++++|++++... +.. .+++++.+|++|++++.++++++|+|||+++
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l~~----~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~ 75 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-LAD----QGVEVRHGDYNQPESLQKAFAGVSKLLFISG 75 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-HHH----TTCEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-Hhh----cCCeEEEeccCCHHHHHHHHhcCCEEEEcCC
Confidence 57999999999999999999998 9999999998765432 221 3588999999999999999999999999998
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTE 165 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~ 165 (327)
.... .++|+.++.+++++|++.+ +++|||+||.+++ ..+.+|+.+|..+|+++++.+++++++||+.++|+.
T Consensus 76 ~~~~------~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~~~~~y~~~K~~~E~~~~~~~~~~~ilrp~~~~~~~ 147 (287)
T 2jl1_A 76 PHYD------NTLLIVQHANVVKAARDAG-VKHIAYTGYAFAE-ESIIPLAHVHLATEYAIRTTNIPYTFLRNALYTDFF 147 (287)
T ss_dssp CCSC------HHHHHHHHHHHHHHHHHTT-CSEEEEEEETTGG-GCCSTHHHHHHHHHHHHHHTTCCEEEEEECCBHHHH
T ss_pred CCcC------chHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-CCCCchHHHHHHHHHHHHHcCCCeEEEECCEecccc
Confidence 6321 1568999999999999998 9999999998886 356789999999999999989999999999988754
Q ss_pred -ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCC
Q 047628 166 -DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYP 244 (327)
Q Consensus 166 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~ 244 (327)
..++.. ....+ ... .+.++..++++|++|+|++++.+++++.. .|++||+++++.+|+.|+++.+.+.+|.+.
T Consensus 148 ~~~~~~~---~~~~~-~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 221 (287)
T 2jl1_A 148 VNEGLRA---STESG-AIV-TNAGSGIVNSVTRNELALAAATVLTEEGH-ENKTYNLVSNQPWTFDELAQILSEVSGKKV 221 (287)
T ss_dssp SSGGGHH---HHHHT-EEE-ESCTTCCBCCBCHHHHHHHHHHHHTSSSC-TTEEEEECCSSCBCHHHHHHHHHHHHSSCC
T ss_pred chhhHHH---HhhCC-cee-ccCCCCccCccCHHHHHHHHHHHhcCCCC-CCcEEEecCCCcCCHHHHHHHHHHHHCCcc
Confidence 333322 22223 333 34567789999999999999999998765 688999999999999999999999999998
Q ss_pred ccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCC---HHHHHhhhcCcccCCCcccccccCCccccccCccHHHHH
Q 047628 245 HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFN---LDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLI 318 (327)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~l~~~~~ 318 (327)
++.++|.+........ .+ .|.+ .. ......+.......+.+++++.|| ++++++|+++++++
T Consensus 222 ~~~~~~~~~~~~~~~~-------~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lG-~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 222 VHQPVSFEEEKNFLVN-------AG--VPEP--FTEITAAIYDAISKGEASKTSDDLQKLIG-SLTPLKETVKQALK 286 (287)
T ss_dssp EEEECCHHHHHHHHHH-------TT--CCHH--HHHHHHHHHHHHHTTTTCCCCSHHHHHHS-SCCCHHHHHHHHHT
T ss_pred eEEeCCHHHHHHHHHh-------CC--CCHH--HHHHHHHHHHHHhCCCCcCCchHHHHHhC-CCCCHHHHHHHHhc
Confidence 8888887665433210 00 0000 00 011111222223333448888899 77899999988865
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-39 Score=277.79 Aligned_cols=283 Identities=19% Similarity=0.187 Sum_probs=212.2
Q ss_pred EEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|||||||||||++++++|+++ |++|++++|++++... +.. .+++++.+|++|++++.++++++|+|||+++.
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~----~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 75 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LAA----QGITVRQADYGDEAALTSALQGVEKLLLISSS 75 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HHH----TTCEEEECCTTCHHHHHHHTTTCSEEEECC--
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hhc----CCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 4899999999999999999998 9999999998766432 221 25889999999999999999999999999985
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCCC
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTED 166 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~~ 166 (327)
.. ..|+.++.+++++|++.+ +++||++||.+++ ..+.+|+.+|..+|+++++.+++++++||+.++++..
T Consensus 76 ~~--------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~-~~~~~y~~sK~~~e~~~~~~~~~~~ilrp~~~~~~~~ 145 (286)
T 2zcu_A 76 EV--------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD-TSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYL 145 (286)
T ss_dssp --------------CHHHHHHHHHHHHT-CCEEEEEEETTTT-TCCSTTHHHHHHHHHHHHHHCSEEEEEEECCBHHHHH
T ss_pred Cc--------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC-CCcchhHHHHHHHHHHHHHcCCCeEEEeChHHhhhhH
Confidence 31 146789999999999998 9999999999887 4567899999999999999999999999987765322
Q ss_pred hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCcc
Q 047628 167 RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246 (327)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~ 246 (327)
..+ ..... .+.+. .++++..+++++++|+|++++.+++++.. .+++||+++++.+|+.|+++.+.+.+|.+.++
T Consensus 146 ~~~---~~~~~-~~~~~-~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 219 (286)
T 2zcu_A 146 ASA---PAALE-HGVFI-GAAGDGKIASATRADYAAAAARVISEAGH-EGKVYELAGDSAWTLTQLAAELTKQSGKQVTY 219 (286)
T ss_dssp TTH---HHHHH-HTEEE-ESCTTCCBCCBCHHHHHHHHHHHHHSSSC-TTCEEEECCSSCBCHHHHHHHHHHHHSSCCEE
T ss_pred HHh---HHhhc-CCcee-ccCCCCccccccHHHHHHHHHHHhcCCCC-CCceEEEeCCCcCCHHHHHHHHHHHHCCCCce
Confidence 222 22222 33444 45677889999999999999999998765 68899999998999999999999999999888
Q ss_pred ccCChHHHHHhhhHHHHHhhhCCCCCCCCC-CCCHHHHHhhhcCcccCCCcccccccCCccccccCccHHHHHHHh
Q 047628 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPG-LFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYLIWYR 321 (327)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~l~~~~~~~~ 321 (327)
.++|.+........ .+ .|.+. .........+.......+.+++++.|||+|++++|+++++++||.
T Consensus 220 ~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 220 QNLSEADFAAALKS-------VG--LPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTTTLAESVSHLFNVNN 286 (286)
T ss_dssp EECCHHHHHHHHTT-------SS--CCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCCCHHHHHHGGGC---
T ss_pred eeCCHHHHHHHHHH-------cC--CCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCCCHHHHHHHHHhhcC
Confidence 88887765543210 00 00000 000111222223323333447888899988899999999988874
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=289.50 Aligned_cols=301 Identities=11% Similarity=0.042 Sum_probs=226.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-----CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-----SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---AN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-----~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d 78 (327)
+|+|||||||||||++|+++|+++| ++|++++|++.... . ...+++++.+|++|++++.+++++ +|
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~~d 74 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--H----EDNPINYVQCDISDPDDSQAKLSPLTDVT 74 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--C----CSSCCEEEECCTTSHHHHHHHHTTCTTCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--c----ccCceEEEEeecCCHHHHHHHHhcCCCCC
Confidence 3789999999999999999999999 99999999876533 1 113688999999999999999998 99
Q ss_pred EEEEccccccccCcchhHhhhhHHHHHHHHHHHHc--CCcceEE-------EEeccCCCCCC----------------Cc
Q 047628 79 VVINLIGREYETRNYSFEDVNHFMAERIAGIAKEH--GGIMRFI-------QISCLGASSSS----------------PS 133 (327)
Q Consensus 79 ~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~v~~~v-------~~Ss~~v~~~~----------------~~ 133 (327)
+|||||+... ..+...+++|+.++.+++++|++. + +++|| |+||.++++.. ++
T Consensus 75 ~vih~a~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~ 152 (364)
T 2v6g_A 75 HVFYVTWANR-STEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMN 152 (364)
T ss_dssp EEEECCCCCC-SSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCC
T ss_pred EEEECCCCCc-chHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCccccCCccch
Confidence 9999999754 345678899999999999999998 6 89998 78887665321 24
Q ss_pred hHHHhHHHHHHHHHh----hC-CCeEEEecCeeecCCChh-----HHH-HHHHH--hhcCceeeecCCC---ceecceeH
Q 047628 134 RVFSTKAAAEEAVLR----EL-PWATIMRPAAMIGTEDRL-----LNK-WAQFV--KKFNFFPLFGDGS---TRIQPVYV 197 (327)
Q Consensus 134 ~y~~~K~~~E~~~~~----~~-~~~~i~r~~~~~G~~~~~-----~~~-~~~~~--~~~~~~~~~~~~~---~~~~~i~~ 197 (327)
.|. .+|+++++ .+ ++++++||+.+||+++.. ... +...+ ..+..+.++|+++ ..++++++
T Consensus 153 ~y~----~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v 228 (364)
T 2v6g_A 153 FYY----DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDA 228 (364)
T ss_dssp HHH----HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEH
T ss_pred hhH----HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcH
Confidence 563 46666655 34 899999999999986431 222 23333 3456667677763 45788899
Q ss_pred HHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc--cCChHHHHHhhhHH---HHHhhhCCCCC
Q 047628 198 VDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV--KVPFPVAKAVAMPR---EILLKKVPFPL 272 (327)
Q Consensus 198 ~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~---~~~~~~~~~~~ 272 (327)
+|+|++++.+++++.. .+++||+++++.+|+.|+++.+++.+|.+.... .+|.++.+..+... +.+.+..+. .
T Consensus 229 ~Dva~a~~~~~~~~~~-~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~ 306 (364)
T 2v6g_A 229 DLIAEHHIWAAVDPYA-KNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGL-T 306 (364)
T ss_dssp HHHHHHHHHHHHCGGG-TTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTC-C
T ss_pred HHHHHHHHHHHhCCCC-CCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCC-C
Confidence 9999999999998764 578999999999999999999999999887655 78888777766622 222222221 1
Q ss_pred CCCCCCCHHH-----HH-hhhcC-cccCCCcccccccCCccc-cccCccHHHHHHHhhCCCC
Q 047628 273 PRPGLFNLDE-----IN-AYTSD-TIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 273 ~~~~~~~~~~-----~~-~~~~~-~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~~ 326 (327)
+.. + ... .. .+... ..++. +|+++ |||+|. +++++++++++||+++|+.
T Consensus 307 ~~~--~-~~~~~~~~~~~~~~~~~~~~d~-~k~~~-lG~~p~~~~~e~l~~~~~~~~~~g~l 363 (364)
T 2v6g_A 307 PTK--L-KDVGIWWFGDVILGNECFLDSM-NKSKE-HGFLGFRNSKNAFISWIDKAKAYKIV 363 (364)
T ss_dssp CCC--H-HHHCCHHHHHHHHTSCCCCBCC-HHHHH-TTCCCCCCHHHHHHHHHHHHHHTTSC
T ss_pred ccc--c-ccccccchhhhccccchhhcch-HHHHh-cCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 110 0 010 00 11233 35665 48877 999975 9999999999999999874
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-39 Score=286.48 Aligned_cols=274 Identities=17% Similarity=0.155 Sum_probs=216.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----cccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-----KANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~~d~v 80 (327)
+|+|||||||||||++|+++|+++| ++|++++|+..... .... .++. +.+|+++++.+.++++ ++|+|
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~---~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~V 119 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNL---VDLN-IADYMDKEDFLIQIMAGEEFGDVEAI 119 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGT---TTSC-CSEEEEHHHHHHHHHTTCCCSSCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhcc---cCce-EeeecCcHHHHHHHHhhcccCCCCEE
Confidence 4789999999999999999999999 99999999865421 1111 1234 7899999999999887 49999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHH
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEA 145 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~ 145 (327)
||+|+.... ..+...+++|+.++.+++++|++.+ + +|||+||..++... .+.|+.+|..+|++
T Consensus 120 ih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~ 197 (357)
T 2x6t_A 120 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEY 197 (357)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHH
T ss_pred EECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHH
Confidence 999997543 3345688999999999999999998 8 99999998775332 26899999999999
Q ss_pred HHhh----CCCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCc-eecceeHHHHHHHHHHHhhcCCC
Q 047628 146 VLRE----LPWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGST-RIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 146 ~~~~----~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
++.+ +++++++||+.+||++. ..+..+...+..+..+.++++++. .+++++++|+|++++.+++++.
T Consensus 198 ~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~- 276 (357)
T 2x6t_A 198 VRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV- 276 (357)
T ss_dssp HHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhcCC-
Confidence 9875 48999999999999964 356667777777777777888888 9999999999999999998765
Q ss_pred CCCceEEecCCccccHHHHHHHHHHHhhcC-CccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCccc
Q 047628 214 SMGKIYELGGPDIFTVHELAELMYDTIREY-PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIV 292 (327)
Q Consensus 214 ~~~~~~~v~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (327)
+++||+++++.+|+.|+++.+.+.+|.+ +...+.+.+.. .........
T Consensus 277 --~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~-----------------------------~~~~~~~~~ 325 (357)
T 2x6t_A 277 --SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK-----------------------------GRYQAFTQA 325 (357)
T ss_dssp --CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGT-----------------------------TSCCSBCCC
T ss_pred --CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccc-----------------------------ccccccccc
Confidence 6799999999999999999999999987 44444442100 000112233
Q ss_pred CCCcccccccCC-cc-ccccCccHHHHHHHhh
Q 047628 293 SDNALTFQDLGI-VP-HKLKGYPTEYLIWYRK 322 (327)
Q Consensus 293 ~~~~~~~~~lg~-~p-~~~~~~l~~~~~~~~~ 322 (327)
+. +++++ ||| .| .+++|+++++++||++
T Consensus 326 ~~-~k~~~-lG~~~~~~~l~e~l~~~~~~~~~ 355 (357)
T 2x6t_A 326 DL-TNLRA-AGYDKPFKTVAEGVTEYMAWLNR 355 (357)
T ss_dssp CC-HHHHH-TTCCCCCCCHHHHHHHHHHHHC-
T ss_pred CH-HHHHH-cCCCCCCCCHHHHHHHHHHHHhh
Confidence 43 46654 999 55 4999999999999975
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=281.63 Aligned_cols=272 Identities=17% Similarity=0.151 Sum_probs=195.9
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhcc-----ccEEE
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-----ANVVI 81 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-----~d~vi 81 (327)
+|||||||||||++|+++|+++| ++|++++|++.... ..+. ++. +.+|+++++.+.+++++ +|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi 73 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV------DLN-IADYMDKEDFLIQIMAGEEFGDVEAIF 73 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH------TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC------cce-eccccccHHHHHHHHhccccCCCcEEE
Confidence 48999999999999999999999 99999999865421 1111 234 78999999999999875 99999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHH
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAV 146 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~ 146 (327)
|+|+.... ..+...+++|+.++.+++++|++.+ + +|||+||.+++... .+.|+.+|..+|+++
T Consensus 74 ~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~ 151 (310)
T 1eq2_A 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV 151 (310)
T ss_dssp ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred ECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHH
Confidence 99997543 3445688999999999999999998 8 99999998775321 268999999999999
Q ss_pred Hhh----CCCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCc-eecceeHHHHHHHHHHHhhcCCCC
Q 047628 147 LRE----LPWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGST-RIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 147 ~~~----~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
+.+ +++++++||+.+||+++ .++..+...+..++.+.++++++. .++++|++|+|++++.+++++.
T Consensus 152 ~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~~-- 229 (310)
T 1eq2_A 152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-- 229 (310)
T ss_dssp HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred HHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcCC--
Confidence 875 48999999999999975 356667777776777777788888 9999999999999999998765
Q ss_pred CCceEEecCCccccHHHHHHHHHHHhhcC-CccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccC
Q 047628 215 MGKIYELGGPDIFTVHELAELMYDTIREY-PHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (327)
+++||+++++.+|+.|+++.+.+.+|.+ +...+.+.+. ..........+
T Consensus 230 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~ 279 (310)
T 1eq2_A 230 -SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL-----------------------------KGRYQAFTQAD 279 (310)
T ss_dssp -CEEEEESCSCCBCHHHHHHHC--------------------------------------------------CCCSCCBC
T ss_pred -CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhh-----------------------------hcccccccccc
Confidence 6799999999999999999999999976 3322222100 00011123334
Q ss_pred CCcccccccCC-cc-ccccCccHHHHHHHhhC
Q 047628 294 DNALTFQDLGI-VP-HKLKGYPTEYLIWYRKG 323 (327)
Q Consensus 294 ~~~~~~~~lg~-~p-~~~~~~l~~~~~~~~~~ 323 (327)
. ++++ .||| .| .+++++++++++||++.
T Consensus 280 ~-~~~~-~lG~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 280 L-TNLR-AAGYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp C-HHHH-HTTCCCCCCCHHHHHHHHHHHTC--
T ss_pred h-HHHH-hcCCCCCCCCHHHHHHHHHHHHHhc
Confidence 3 4665 4999 55 49999999999999763
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-38 Score=276.47 Aligned_cols=263 Identities=10% Similarity=0.053 Sum_probs=203.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
.|+|+|||||| ||||++|+++|+++|++|++++|++++.. .+.. .+++++.+|+++.+ +.++|+|||+|
T Consensus 3 ~m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~----~~~~~~~~D~~d~~-----~~~~d~vi~~a 71 (286)
T 3ius_A 3 AMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-AIRA----SGAEPLLWPGEEPS-----LDGVTHLLIST 71 (286)
T ss_dssp --CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHH-HHHH----TTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred CCcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhh-hHhh----CCCeEEEecccccc-----cCCCCEEEECC
Confidence 34589999998 99999999999999999999999876532 2222 35899999999855 78899999999
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHH--cCCcceEEEEeccCCCCCCC-------------chHHHhHHHHHHHHHhh
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKE--HGGIMRFIQISCLGASSSSP-------------SRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~v~~~v~~Ss~~v~~~~~-------------~~y~~~K~~~E~~~~~~ 149 (327)
+...... ..+.++++++++ .+ +++|||+||.+++...+ +.|+.+|+.+|++++.+
T Consensus 72 ~~~~~~~---------~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~ 141 (286)
T 3ius_A 72 APDSGGD---------PVLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV 141 (286)
T ss_dssp CCBTTBC---------HHHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS
T ss_pred Ccccccc---------HHHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh
Confidence 8754322 235789999998 66 89999999988754321 57999999999999998
Q ss_pred -CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcccc
Q 047628 150 -LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 150 -~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s 228 (327)
+++++++||+.+||+++..+. .+..+....+.++ .+.++++|++|+|++++.+++++.. +++||+++++.+|
T Consensus 142 ~~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~~--g~~~~i~~~~~~s 214 (286)
T 3ius_A 142 PNLPLHVFRLAGIYGPGRGPFS----KLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPDP--GAVYNVCDDEPVP 214 (286)
T ss_dssp TTCCEEEEEECEEEBTTBSSST----TSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCCT--TCEEEECCSCCBC
T ss_pred cCCCEEEEeccceECCCchHHH----HHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCCC--CCEEEEeCCCCcc
Confidence 899999999999999765532 2333455555544 5789999999999999999998875 7899999999999
Q ss_pred HHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc
Q 047628 229 VHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH 307 (327)
Q Consensus 229 ~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~ 307 (327)
+.|+++.+++.+|.+.... +.+. . . ........+.....++. +++++.|||+|+
T Consensus 215 ~~e~~~~i~~~~g~~~~~~~~~~~--~-------------------~---~~~~~~~~~~~~~~~d~-~k~~~~lG~~p~ 269 (286)
T 3ius_A 215 PQDVIAYAAELQGLPLPPAVDFDK--A-------------------D---LTPMARSFYSENKRVRN-DRIKEELGVRLK 269 (286)
T ss_dssp HHHHHHHHHHHHTCCCCCEEEGGG--S-------------------C---CCHHHHHTTSCCCEECC-HHHHHTTCCCCS
T ss_pred HHHHHHHHHHHcCCCCCcccchhh--h-------------------c---cChhHHHhhcCCceeeh-HHHHHHhCCCCC
Confidence 9999999999999875432 1110 0 0 11222222234455665 489899999998
Q ss_pred --cccCccHHHHHHH
Q 047628 308 --KLKGYPTEYLIWY 320 (327)
Q Consensus 308 --~~~~~l~~~~~~~ 320 (327)
+++|+++++++..
T Consensus 270 ~p~~~e~l~~~~~~~ 284 (286)
T 3ius_A 270 YPNYRVGLEALQADA 284 (286)
T ss_dssp CSSHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHhc
Confidence 5999999887754
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-38 Score=273.44 Aligned_cols=268 Identities=16% Similarity=0.127 Sum_probs=203.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|||||||||||||++|+++|+++||+|++++|++... ++. . .+...+.++++|+|||+|+..
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-----------~~~---~----~~~~~~~l~~~d~vihla~~~ 62 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-----------RIT---W----DELAASGLPSCDAAVNLAGEN 62 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------EEE---H----HHHHHHCCCSCSEEEECCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-----------eee---c----chhhHhhccCCCEEEEeccCc
Confidence 7899999999999999999999999999999986542 121 1 233355678999999999853
Q ss_pred ccc--------CcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCC---------C----chHHHhHHHHHHH
Q 047628 88 YET--------RNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSS---------P----SRVFSTKAAAEEA 145 (327)
Q Consensus 88 ~~~--------~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~---------~----~~y~~~K~~~E~~ 145 (327)
... ....+.+.|+.+|.+|+++++..+ +..+||++||.++|++. | +.|+..+...|..
T Consensus 63 i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~ 142 (298)
T 4b4o_A 63 ILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAA 142 (298)
T ss_dssp SSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHHH
T ss_pred ccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHHH
Confidence 211 123567889999999999999887 13458899998776432 2 4566666666654
Q ss_pred HH--hhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecC
Q 047628 146 VL--RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG 223 (327)
Q Consensus 146 ~~--~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~ 223 (327)
.. ..+++++++||+.+||+++..+..+......+ ....+|++++.++|||++|+|+++..+++++.. +++||+++
T Consensus 143 ~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~-~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~--~g~yn~~~ 219 (298)
T 4b4o_A 143 ARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLG-LGGPIGSGHQFFPWIHIGDLAGILTHALEANHV--HGVLNGVA 219 (298)
T ss_dssp HCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTT-CCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTC--CEEEEESC
T ss_pred HHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcC-CcceecccCceeecCcHHHHHHHHHHHHhCCCC--CCeEEEEC
Confidence 32 23489999999999999988877777666544 455568999999999999999999999998875 56999999
Q ss_pred CccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccC
Q 047628 224 PDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLG 303 (327)
Q Consensus 224 ~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 303 (327)
++++|+.|+++.+++.+|++. ..++|.++++.... .+..+.+..+..+++. |. .++|
T Consensus 220 ~~~~t~~e~~~~ia~~lgrp~-~~pvP~~~~~~~~g--------------------~~~~~~~l~~~rv~~~-kl-~~~G 276 (298)
T 4b4o_A 220 PSSATNAEFAQTFGAALGRRA-FIPLPSAVVQAVFG--------------------RQRAIMLLEGQKVIPR-RT-LATG 276 (298)
T ss_dssp SCCCBHHHHHHHHHHHHTCCC-CCCBCHHHHHHHHC--------------------HHHHHHHHCCCCBCCH-HH-HHTT
T ss_pred CCccCHHHHHHHHHHHhCcCC-cccCCHHHHHHHhc--------------------chhHHHhhCCCEEcHH-HH-HHCC
Confidence 999999999999999999765 46789888876432 2222223344555553 55 5689
Q ss_pred Cccc--cccCccHHHHHH
Q 047628 304 IVPH--KLKGYPTEYLIW 319 (327)
Q Consensus 304 ~~p~--~~~~~l~~~~~~ 319 (327)
|+++ ++++++++.++.
T Consensus 277 f~f~yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 277 YQYSFPELGAALKEIAEN 294 (298)
T ss_dssp CCCSCCSHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHh
Confidence 9987 688888888764
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=278.48 Aligned_cols=301 Identities=16% Similarity=0.058 Sum_probs=219.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~ 82 (327)
++|+|||||||||||++++++|+++|++|++++|+++... ..+......++++++.+|++|++++.+++++ +|+|||
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 81 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYN 81 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 4589999999999999999999999999999999876532 1222222224688999999999999999986 599999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCc-ceEEEEeccCCCC---------CCC----chHHHhHHHHHH
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGI-MRFIQISCLGASS---------SSP----SRVFSTKAAAEE 144 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v-~~~v~~Ss~~v~~---------~~~----~~y~~~K~~~E~ 144 (327)
||+.... ......+++|+.++.+++++|++.+ + ++||++||..+++ ..+ +.|+.+|..+|.
T Consensus 82 ~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~ 160 (345)
T 2z1m_A 82 LAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHW 160 (345)
T ss_dssp CCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred CCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHH
Confidence 9997532 2345678999999999999999887 7 7999999987642 121 789999999999
Q ss_pred HHHhh----CCCeEEEecCeeecCCCh--hH----HHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 145 AVLRE----LPWATIMRPAAMIGTEDR--LL----NKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 145 ~~~~~----~~~~~i~r~~~~~G~~~~--~~----~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+++.+ +++++++|+..+|||+.. .+ ..+...+..+. ....++++...++++|++|+|++++.+++++.
T Consensus 161 ~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~~- 239 (345)
T 2z1m_A 161 ITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQPE- 239 (345)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSSS-
T ss_pred HHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCCC-
Confidence 98765 689999999999999632 22 22233333343 23356788889999999999999999998764
Q ss_pred CCCceEEecCCccccHHHHHHHHHHHhhcCCccc--cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcc
Q 047628 214 SMGKIYELGGPDIFTVHELAELMYDTIREYPHYV--KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTI 291 (327)
Q Consensus 214 ~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (327)
+++||+++++.+|+.|+++.+.+.+|.+.++. ++|.+.++ ....+ ....+ .+.+ ... .......
T Consensus 240 --~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~--~~~~~---~~~~~-~~~~--~~~----~~~~~~~ 305 (345)
T 2z1m_A 240 --PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGID--RNTGK---VIVEV-SEEF--FRP----AEVDILV 305 (345)
T ss_dssp --CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEE--TTTCC---EEEEE-CGGG--SCS----SCCCBCC
T ss_pred --CceEEEeCCCCccHHHHHHHHHHHhCCCcccccccccccccc--ccccc---ccccc-Cccc--CCC----CCcceee
Confidence 36999999999999999999999999875432 13322111 00000 00000 0000 000 0011223
Q ss_pred cCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 292 VSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 292 ~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
++. +++++.|||+|+ +++++++++++|+++.
T Consensus 306 ~d~-~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 337 (345)
T 2z1m_A 306 GNP-EKAMKKLGWKPRTTFDELVEIMMEADLKR 337 (345)
T ss_dssp BCC-HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cCH-HHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence 444 588889999996 9999999999999863
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-38 Score=281.86 Aligned_cols=299 Identities=14% Similarity=0.006 Sum_probs=218.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccC------CCCCeeEEeeCCCChhHHHHHhcc--cc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMG------DLGQIVPMKFNPRDDNTIKATMAK--AN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~------~~~~v~~~~~Dl~~~~~~~~~~~~--~d 78 (327)
|+|||||||||||++++++|+++|++|++++|+++.. ...+.... ...+++++.+|++|++++.+++++ +|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 7899999999999999999999999999999986542 11111110 113688999999999999999986 59
Q ss_pred EEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCc---ceEEEEeccCCCCCC-------------CchHHHh
Q 047628 79 VVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGI---MRFIQISCLGASSSS-------------PSRVFST 138 (327)
Q Consensus 79 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v---~~~v~~Ss~~v~~~~-------------~~~y~~~ 138 (327)
+|||||+.... ..+...+++|+.++.+++++|++.+ + ++|||+||..++... .+.|+.+
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~s 183 (375)
T 1t2a_A 105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 183 (375)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHH
Confidence 99999997542 2345678999999999999999988 7 799999998776421 1689999
Q ss_pred HHHHHHHHHhh----CCCeEEEecCeeecCCCh--h----HHHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHHH
Q 047628 139 KAAAEEAVLRE----LPWATIMRPAAMIGTEDR--L----LNKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 139 K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~--~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|.++|.+++.+ +++++++|++.+|||+.. + +..+...+..+. ....++++++.++++|++|+|++++.+
T Consensus 184 K~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~ 263 (375)
T 1t2a_A 184 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 263 (375)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHH
Confidence 99999998764 699999999999998532 2 233333344443 334568889999999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc--cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV--KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
++++. +++||+++++.+|+.|+++.+++.+|.+..+. .+|.+.++.... . ....+ .+.+ ....
T Consensus 264 ~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~--~---~~~~~-~~~~--~~~~---- 328 (375)
T 1t2a_A 264 LQNDE---PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETG--K---VHVTV-DLKY--YRPT---- 328 (375)
T ss_dssp HHSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTC--C---EEEEE-CGGG--SCSS----
T ss_pred HhcCC---CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccc--c---ceeec-Cccc--CCcc----
Confidence 98764 37999999999999999999999999765432 133221110000 0 00000 0000 0000
Q ss_pred hhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 286 YTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 286 ~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
......++. +++++.|||+|+ +++|+++++++||++.
T Consensus 329 ~~~~~~~d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 366 (375)
T 1t2a_A 329 EVDFLQGDC-TKAKQKLNWKPRVAFDELVREMVHADVEL 366 (375)
T ss_dssp CCCBCCBCC-HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cchhhcCCH-HHHHHhcCCCccCCHHHHHHHHHHHHHHh
Confidence 011223444 588889999997 9999999999999864
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-38 Score=279.09 Aligned_cols=270 Identities=16% Similarity=0.078 Sum_probs=190.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a 84 (327)
+|+|||||||||||++++++|+++|++|++++|+.+. ++ ++.+|+++++++.+++++ +|+|||||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~~--~~~~Dl~d~~~~~~~~~~~~~d~vih~A 68 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------PK--FEQVNLLDSNAVHHIIHDFQPHVIVHCA 68 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------CHHHHHHHCCSEEEECC
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------CC--eEEecCCCHHHHHHHHHhhCCCEEEECC
Confidence 4799999999999999999999999999999987543 12 678999999999999886 89999999
Q ss_pred ccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-----------C-CchHHHhHHHHHHHHHh
Q 047628 85 GREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-----------S-PSRVFSTKAAAEEAVLR 148 (327)
Q Consensus 85 ~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-----------~-~~~y~~~K~~~E~~~~~ 148 (327)
+.... ..+...+++|+.++.+++++|++.+ + +|||+||..++.. . .+.|+.+|..+|++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~ 146 (315)
T 2ydy_A 69 AERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLE 146 (315)
T ss_dssp -------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred cccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHH
Confidence 97542 3445688999999999999999998 6 9999999887643 1 27899999999999999
Q ss_pred hCCCeEEEecCeeecCCCh----hHHHHHHHHh-hcCceeeecCCCceecceeHHHHHHHHHHHhhcC---CCCCCceEE
Q 047628 149 ELPWATIMRPAAMIGTEDR----LLNKWAQFVK-KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD---GTSMGKIYE 220 (327)
Q Consensus 149 ~~~~~~i~r~~~~~G~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~---~~~~~~~~~ 220 (327)
.+.+++++||+.+||+.+. ++..+...+. .+..+.+. +++.++++|++|+|++++.+++++ .. .+++||
T Consensus 147 ~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~~~~~~-~~~~~~ 223 (315)
T 2ydy_A 147 NNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD--HWQQRFPTHVKDVATVCRQLAEKRMLDPS-IKGTFH 223 (315)
T ss_dssp HCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE--CSSBBCCEEHHHHHHHHHHHHHHHHTCTT-CCEEEE
T ss_pred hCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec--cCceECcEEHHHHHHHHHHHHHhhccccC-CCCeEE
Confidence 9999999999999998653 4444555554 45555544 457789999999999999999864 23 578999
Q ss_pred ecCCccccHHHHHHHHHHHhhcCCc-cccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccc
Q 047628 221 LGGPDIFTVHELAELMYDTIREYPH-YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTF 299 (327)
Q Consensus 221 v~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (327)
+++++.+|+.|+++.+.+.+|.+.. +.+++. ......+. .....++. ++++
T Consensus 224 i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------------~~~~~~~~------------~~~~~~d~-~k~~ 275 (315)
T 2ydy_A 224 WSGNEQMTKYEMACAIADAFNLPSSHLRPITD---------------SPVLGAQR------------PRNAQLDC-SKLE 275 (315)
T ss_dssp CCCSCCBCHHHHHHHHHHHTTCCCTTEEEECS---------------CCCSSSCC------------CSBCCBCC-HHHH
T ss_pred EcCCCcccHHHHHHHHHHHhCCChhheecccc---------------ccccccCC------------Ccccccch-HHHH
Confidence 9999999999999999999998765 334441 00000000 11234555 4887
Q ss_pred cccCCccc-cccCccHHHHHHHhhC
Q 047628 300 QDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 300 ~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
+. ||.|. +++++++++++||+++
T Consensus 276 ~~-G~~p~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 276 TL-GIGQRTPFRIGIKESLWPFLID 299 (315)
T ss_dssp HT-TCCCCCCHHHHHHHHHGGGCC-
T ss_pred hc-CCCCCCCHHHHHHHHHHHHccc
Confidence 77 99775 9999999999999876
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=301.69 Aligned_cols=289 Identities=17% Similarity=0.143 Sum_probs=219.3
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh---cccCCCCCeeEEeeCCCChhHHHHHhc--cc
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL---KLMGDLGQIVPMKFNPRDDNTIKATMA--KA 77 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~ 77 (327)
+.+++|+|||||||||||++|+++|+++|++|++++|+........ .... ..+++++.+|+++++++.++++ ++
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~v~~v~~Dl~d~~~l~~~~~~~~~ 85 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT-KHHIPFYEVDLCDRKGLEKVFKEYKI 85 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH-TSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc-CCceEEEEcCCCCHHHHHHHHHhCCC
Confidence 3445689999999999999999999999999999999865432211 1110 1358899999999999999998 79
Q ss_pred cEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-------------C---C-chHH
Q 047628 78 NVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-------------S---P-SRVF 136 (327)
Q Consensus 78 d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-------------~---~-~~y~ 136 (327)
|+|||+|+.... ..+...+++|+.++.+++++|++.+ +++||++||.+++.. . | +.|+
T Consensus 86 D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~ 164 (699)
T 1z45_A 86 DSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYG 164 (699)
T ss_dssp CEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHH
T ss_pred CEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCCCCCChHH
Confidence 999999987532 2345678999999999999999998 899999999876532 1 1 6899
Q ss_pred HhHHHHHHHHHh------hCCCeEEEecCeeecCCC-------------hhHHHHHHHHhh-cCceeeec------CCCc
Q 047628 137 STKAAAEEAVLR------ELPWATIMRPAAMIGTED-------------RLLNKWAQFVKK-FNFFPLFG------DGST 190 (327)
Q Consensus 137 ~~K~~~E~~~~~------~~~~~~i~r~~~~~G~~~-------------~~~~~~~~~~~~-~~~~~~~~------~~~~ 190 (327)
.+|.++|++++. .+++++++||+.+||+.. .++..+...... ...+.++| ++++
T Consensus 165 ~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 244 (699)
T 1z45_A 165 HTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTP 244 (699)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSC
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCe
Confidence 999999999876 368999999999999742 234444443332 23555655 6788
Q ss_pred eecceeHHHHHHHHHHHhhcC------CCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHH
Q 047628 191 RIQPVYVVDVAAAVTAALKDD------GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREIL 264 (327)
Q Consensus 191 ~~~~i~~~D~a~~~~~~l~~~------~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 264 (327)
.++++|++|+|++++.+++.. .. .+++||+++++.+|+.|+++.+++.+|.+.++...+.
T Consensus 245 ~~~~i~v~Dva~a~~~a~~~~~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~------------- 310 (699)
T 1z45_A 245 IRDYIHVVDLAKGHIAALQYLEAYNENEG-LCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR------------- 310 (699)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHHSCTTCC-EEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC------------------
T ss_pred eEeeEEHHHHHHHHHHHHhhhhccccccC-CceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCC-------------
Confidence 999999999999999998742 22 3579999999999999999999999998765432220
Q ss_pred hhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCCC
Q 047628 265 LKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~~ 326 (327)
. + . + .....++. +++++.|||+|+ +++|+++++++||+++++-
T Consensus 311 --~-----~------~---~--~~~~~~d~-~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~~ 354 (699)
T 1z45_A 311 --R-----A------G---D--VLNLTAKP-DRAKRELKWQTELQVEDSCKDLWKWTTENPFG 354 (699)
T ss_dssp ----------------------CCCCCBCC-HHHHHHTCCCCCCCHHHHHHHHHHHHHHCTTC
T ss_pred --C-----C------C---c--cccccCCH-HHHHHhcCCCCCCCHHHHHHHHHHHHHhCCcc
Confidence 0 0 0 0 11234555 488899999996 9999999999999987653
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-38 Score=271.04 Aligned_cols=275 Identities=17% Similarity=0.160 Sum_probs=212.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|+||||||||+||++++++|++. |++|++++|++++.... .. .+++++.+|++|++++.++++++|+|||+++.
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~----~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 75 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WR----GKVSVRQLDYFNQESMVEAFKGMDTVVFIPSI 75 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GB----TTBEEEECCTTCHHHHHHHTTTCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hh----CCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCC
Confidence 57999999999999999999998 99999999987654322 11 36899999999999999999999999999986
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeEEEecCeeecCCC
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTED 166 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~~G~~~ 166 (327)
... ...|+.++.+++++|++.| +++|||+||++..+..|..+...+..+|+.++..+++++++||+.++|+..
T Consensus 76 ~~~------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~~~~~~~~~~~~~~~e~~~~~~g~~~~ilrp~~~~~~~~ 148 (289)
T 3e48_A 76 IHP------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQHNNPFHMSPYFGYASRLLSTSGIDYTYVRMAMYMDPLK 148 (289)
T ss_dssp CCS------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCSTTCCSTTHHHHHHHHHHHHHHCCEEEEEEECEESTTHH
T ss_pred Ccc------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCCCCCCCCccchhHHHHHHHHHHcCCCEEEEeccccccccH
Confidence 432 2347889999999999999 999999999887766665555566788999999999999999999997632
Q ss_pred hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCcc
Q 047628 167 RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY 246 (327)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~ 246 (327)
..+..... .+.. ..+.++..+++++++|+|++++.++.++.. .|++||++ ++.+|+.|+++.+.+.+|+++.+
T Consensus 149 ---~~~~~~~~-~~~~-~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~-~g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~ 221 (289)
T 3e48_A 149 ---PYLPELMN-MHKL-IYPAGDGRINYITRNDIARGVIAIIKNPDT-WGKRYLLS-GYSYDMKELAAILSEASGTEIKY 221 (289)
T ss_dssp ---HHHHHHHH-HTEE-CCCCTTCEEEEECHHHHHHHHHHHHHCGGG-TTCEEEEC-CEEEEHHHHHHHHHHHHTSCCEE
T ss_pred ---HHHHHHHH-CCCE-ecCCCCceeeeEEHHHHHHHHHHHHcCCCc-CCceEEeC-CCcCCHHHHHHHHHHHHCCceeE
Confidence 22222222 3333 335678899999999999999999998876 58899999 89999999999999999999998
Q ss_pred ccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCH---HHHHhhhcCc-ccCCCcccccccCCccccccCccHHH
Q 047628 247 VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL---DEINAYTSDT-IVSDNALTFQDLGIVPHKLKGYPTEY 316 (327)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~lg~~p~~~~~~l~~~ 316 (327)
.+++.......... |. .+.. .......... .... ....+.+|++|++++|++++.
T Consensus 222 ~~~~~~~~~~~~~~------------p~--~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~G~~p~~~~~~~~~~ 280 (289)
T 3e48_A 222 EPVSLETFAEMYDE------------PK--GFGALLASMYHAGARGLLDQES-NDFKQLVNDQPQTLQSFLQEN 280 (289)
T ss_dssp CCCCHHHHHHHTCC------------ST--THHHHHHHHHHHHHTTTTCCCC-SHHHHHHSSCCCCHHHHHHC-
T ss_pred EeCCHHHHHHHhcC------------Cc--cHHHHHHHHHHHHHCCCccccC-chHHHHhCCCCCCHHHHHHHH
Confidence 88886655433221 00 0111 1122222222 2333 356788999999999888654
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=298.93 Aligned_cols=296 Identities=16% Similarity=0.144 Sum_probs=226.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhH-HHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT-IKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~-~~~~~~~~d~vi~ 82 (327)
+++|+|||||||||||++++++|+++ |++|++++|+.+....... ..+++++.+|++++++ +.++++++|+|||
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~----~~~v~~v~~Dl~d~~~~~~~~~~~~D~Vih 388 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLN----HPHFHFVEGDISIHSEWIEYHVKKCDVVLP 388 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTT----CTTEEEEECCTTTCHHHHHHHHHHCSEEEE
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhcc----CCceEEEECCCCCcHHHHHHhhcCCCEEEE
Confidence 34689999999999999999999998 8999999998765332211 2468999999998765 7778899999999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC---------C----------C-chHHHh
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS---------S----------P-SRVFST 138 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~---------~----------~-~~y~~~ 138 (327)
+|+.... ..+...+++|+.++.+++++|++.+ ++|||+||.+++.. . | +.|+.+
T Consensus 389 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~s 466 (660)
T 1z7e_A 389 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS 466 (660)
T ss_dssp CCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHH
T ss_pred CceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHH
Confidence 9987542 3445678899999999999999987 79999999876421 1 1 369999
Q ss_pred HHHHHHHHHh----hCCCeEEEecCeeecCCC-----------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHH
Q 047628 139 KAAAEEAVLR----ELPWATIMRPAAMIGTED-----------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 139 K~~~E~~~~~----~~~~~~i~r~~~~~G~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
|..+|.+++. .+++++++||+.+||+.. .++..+...+..+..+.+++++++.++++|++|+|++
T Consensus 467 K~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a 546 (660)
T 1z7e_A 467 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 546 (660)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHH
Confidence 9999999865 469999999999999964 2456666667777778888888899999999999999
Q ss_pred HHHHhhcCC--CCCCceEEecCCc-cccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCH
Q 047628 204 VTAALKDDG--TSMGKIYELGGPD-IFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL 280 (327)
Q Consensus 204 ~~~~l~~~~--~~~~~~~~v~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (327)
++.+++++. . .+++||+++++ .+|+.|+++.+.+.+|.+.....+|.+............... + .
T Consensus 547 i~~~l~~~~~~~-~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~--~--~------- 614 (660)
T 1z7e_A 547 LYRIIENAGNRC-DGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKG--Y--Q------- 614 (660)
T ss_dssp HHHHHHCGGGTT-TTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTT--C--C-------
T ss_pred HHHHHhCccccC-CCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhcccccccc--c--c-------
Confidence 999998764 3 57899999986 899999999999999976544344421100000000000000 0 0
Q ss_pred HHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 281 DEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
......++. +++++.|||+|+ +++++++++++||+++.
T Consensus 615 -----~~~~~~~d~-~ka~~~LG~~p~~~l~egl~~~i~~~~~~~ 653 (660)
T 1z7e_A 615 -----DVEHRKPSI-RNAHRCLDWEPKIDMQETIDETLDFFLRTV 653 (660)
T ss_dssp -----CCSCCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHTTS
T ss_pred -----chhhcccCH-HHHHHhcCCCccCcHHHHHHHHHHHHHhhc
Confidence 011234454 588899999996 99999999999999875
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=272.52 Aligned_cols=282 Identities=12% Similarity=0.001 Sum_probs=216.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-------CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-------SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-~ 76 (327)
+++|+|||||||||||++++++|+++| ++|++++|+.+..... ...+++++.+|+++++++.++++ +
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~~ 86 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAG-----FSGAVDARAADLSAPGEAEKLVEAR 86 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTT-----CCSEEEEEECCTTSTTHHHHHHHTC
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccc-----cCCceeEEEcCCCCHHHHHHHHhcC
Confidence 557899999999999999999999999 8999999986543210 11368899999999999999985 8
Q ss_pred ccEEEEccccccc---cCcchhHhhhhHHHHHHHHHHHHcC----CcceEEEEeccCCCCCC------------C-chHH
Q 047628 77 ANVVINLIGREYE---TRNYSFEDVNHFMAERIAGIAKEHG----GIMRFIQISCLGASSSS------------P-SRVF 136 (327)
Q Consensus 77 ~d~vi~~a~~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~----~v~~~v~~Ss~~v~~~~------------~-~~y~ 136 (327)
+|+|||+|+.... ......+++|+.++.+++++|++.+ ++++||++||..++... | +.|+
T Consensus 87 ~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~ 166 (342)
T 2hrz_A 87 PDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYG 166 (342)
T ss_dssp CSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHH
T ss_pred CCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHH
Confidence 9999999997542 3345678999999999999998764 26899999998876532 2 7899
Q ss_pred HhHHHHHHHHHhh----CCCeEEEecCeeec-CCC------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 137 STKAAAEEAVLRE----LPWATIMRPAAMIG-TED------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 137 ~~K~~~E~~~~~~----~~~~~i~r~~~~~G-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.+|.++|.+++.+ +++.+++|++.+|| |+. .++..+......+....++++++...+++|++|+|++++
T Consensus 167 ~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~ 246 (342)
T 2hrz_A 167 TQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVGFLI 246 (342)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHHHHH
Confidence 9999999998775 47899999999998 543 245566666666666666666677888999999999999
Q ss_pred HHhhcCCC--CCCceEEecCCccccHHHHHHHHHHHhhcCC--ccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHH
Q 047628 206 AALKDDGT--SMGKIYELGGPDIFTVHELAELMYDTIREYP--HYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD 281 (327)
Q Consensus 206 ~~l~~~~~--~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
.+++.+.. ..+++||+++ +.+|+.|+++.+.+.+|.+. .+...|....
T Consensus 247 ~~~~~~~~~~~~~~~~ni~g-~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--------------------------- 298 (342)
T 2hrz_A 247 HGAMIDVEKVGPRRNLSMPG-LSATVGEQIEALRKVAGEKAVALIRREPNEMI--------------------------- 298 (342)
T ss_dssp HHHHSCHHHHCSCCEEECCC-EEEEHHHHHHHHHHHHCHHHHTTEEECCCHHH---------------------------
T ss_pred HHHhccccccCCccEEEcCC-CCCCHHHHHHHHHHHcCcccccceeeccCcch---------------------------
Confidence 99987531 0367999975 78999999999999998653 1222221100
Q ss_pred HHHhhhc-CcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 282 EINAYTS-DTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 282 ~~~~~~~-~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
...... ...++. +++++ |||+|+ +++|+++++++||+.
T Consensus 299 -~~~~~~~~~~~d~-~k~~~-lG~~p~~~l~e~l~~~~~~~~~ 338 (342)
T 2hrz_A 299 -MRMCEGWAPGFEA-KRARE-LGFTAESSFEEIIQVHIEDELG 338 (342)
T ss_dssp -HHHHTTSCCCBCC-HHHHH-TTCCCCSSHHHHHHHHHHHHST
T ss_pred -hhhhcccccccCh-HHHHH-cCCCCCCCHHHHHHHHHHHhcC
Confidence 000011 123455 48877 999996 999999999999984
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-37 Score=270.21 Aligned_cols=272 Identities=17% Similarity=0.110 Sum_probs=211.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEcc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLI 84 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a 84 (327)
+|||||||||||++++++|+++ |++|++++|+..... +++++.+|++|++++.++++ ++|+|||+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~~~~d~vih~a 70 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEKYSIDAIFHLA 70 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhhcCCcEEEECC
Confidence 5899999999999999999998 899999999765421 36788999999999999998 899999999
Q ss_pred ccccc---cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------CchHHHhHHHHHHHHH
Q 047628 85 GREYE---TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------PSRVFSTKAAAEEAVL 147 (327)
Q Consensus 85 ~~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~~~y~~~K~~~E~~~~ 147 (327)
+.... ..+...+++|+.++.+++++|++.+ +++||++||..++... .+.|+.+|..+|.+++
T Consensus 71 ~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~ 149 (317)
T 3ajr_A 71 GILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQ 149 (317)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHH
T ss_pred cccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHH
Confidence 87532 3445688999999999999999998 8999999998776431 2789999999999886
Q ss_pred hh----CCCeEEEecCeeecCCC-------h-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC-
Q 047628 148 RE----LPWATIMRPAAMIGTED-------R-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS- 214 (327)
Q Consensus 148 ~~----~~~~~i~r~~~~~G~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~- 214 (327)
.+ +++++++||+.+||+.. . ....+...+ ..+.+..+++++..++++|++|+|++++.+++++...
T Consensus 150 ~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~~ 228 (317)
T 3ajr_A 150 YYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAV-KREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDKL 228 (317)
T ss_dssp HHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHH-TTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGGC
T ss_pred HHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHH-hCCCceeecCccceeeeeEHHHHHHHHHHHHhCCcccc
Confidence 53 69999999999999632 1 233333333 3455666677888999999999999999999876420
Q ss_pred -CCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccC
Q 047628 215 -MGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVS 293 (327)
Q Consensus 215 -~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (327)
.+++||+++ +.+|+.|+++.+.+.+|. ..+...+. . +.... ......++
T Consensus 229 ~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~--~-------------------------~~~~~-~~~~~~~d 278 (317)
T 3ajr_A 229 VLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKED--F-------------------------RDKIA-ATWPESLD 278 (317)
T ss_dssp SSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCC--H-------------------------HHHHH-TTSCSCBC
T ss_pred ccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccc--c-------------------------chhhc-cccccccC
Confidence 257999997 689999999999998872 22222221 0 00000 01123445
Q ss_pred CCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 294 DNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 294 ~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
. +++++.|||+|+ +++++++++++||+++
T Consensus 279 ~-~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 308 (317)
T 3ajr_A 279 S-SEASNEWGFSIEYDLDRTIDDMIDHISEK 308 (317)
T ss_dssp C-HHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred H-HHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Confidence 5 588899999997 9999999999999874
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=277.27 Aligned_cols=307 Identities=13% Similarity=0.011 Sum_probs=213.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccC-----CCCCeeEEeeCCCChhHHHHHhcc--cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMG-----DLGQIVPMKFNPRDDNTIKATMAK--AN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~-----~~~~v~~~~~Dl~~~~~~~~~~~~--~d 78 (327)
||+|||||||||||++++++|+++|++|++++|+.+.. ...+.... ...+++++.+|+++++++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 47899999999999999999999999999999986541 11111110 013688999999999999999986 69
Q ss_pred EEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCc---ceEEEEeccCCCCCC-------------CchHHHh
Q 047628 79 VVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGI---MRFIQISCLGASSSS-------------PSRVFST 138 (327)
Q Consensus 79 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v---~~~v~~Ss~~v~~~~-------------~~~y~~~ 138 (327)
+|||+|+.... ..+...+++|+.++.+++++|++.+ + ++||++||..++... .+.|+.+
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~s 159 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA 159 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHH
Confidence 99999997542 2234567899999999999999988 7 799999998765321 2789999
Q ss_pred HHHHHHHHHhh----CCCeEEEecCeeecCCCh--h----HHHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHHH
Q 047628 139 KAAAEEAVLRE----LPWATIMRPAAMIGTEDR--L----LNKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 139 K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~--~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|.++|.+++.+ +++++++|++.+|||+.. + +..+...+..+. ....+|++++.++++|++|+|++++.+
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~ 239 (372)
T 1db3_A 160 KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMM 239 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHH
Confidence 99999998764 699999999999998632 2 334444444443 344568889999999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCcccc--CChH-HHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHH
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK--VPFP-VAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (327)
++++. +++||+++++.+|+.|+++.+.+.+|.+.++.. +|.+ .++.... .+.....+...... +......
T Consensus 240 ~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~ 312 (372)
T 1db3_A 240 LQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTG-HDAPGVKPGDVIIA---VDPRYFR 312 (372)
T ss_dssp TSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECS-SSCTTCCTTCEEEE---ECGGGCC
T ss_pred HhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCCccccccccccccccccccc-ccccccccccceee---ccccccC
Confidence 98654 479999999999999999999999997654321 1110 0000000 00000000000000 0000000
Q ss_pred hh-hcCcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 285 AY-TSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 285 ~~-~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
.. .....++. ++++++|||+|+ +++|+++++++||++
T Consensus 313 ~~~~~~~~~d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~ 351 (372)
T 1db3_A 313 PAEVETLLGDP-TKAHEKLGWKPEITLREMVSEMVANDLE 351 (372)
T ss_dssp CCC-CCCCBCC-HHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred CCchhhhccCH-HHHHHHhCCccccCHHHHHHHHHHHHHH
Confidence 00 11233444 589899999996 999999999999875
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=276.78 Aligned_cols=283 Identities=15% Similarity=0.038 Sum_probs=215.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-hhhcccCC-----CC-CeeEEeeCCCChhHHHHHhcc--cc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGD-----LG-QIVPMKFNPRDDNTIKATMAK--AN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~-----~~-~v~~~~~Dl~~~~~~~~~~~~--~d 78 (327)
++|||||||||||++|++.|+++|++|++++|+.+... ..+..... .+ +++++.+|+++++++.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 68999999999999999999999999999999875411 11111100 02 688999999999999999986 59
Q ss_pred EEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcc-----eEEEEeccCCCCC-----------C-CchHHH
Q 047628 79 VVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIM-----RFIQISCLGASSS-----------S-PSRVFS 137 (327)
Q Consensus 79 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~-----~~v~~Ss~~v~~~-----------~-~~~y~~ 137 (327)
+|||||+.... ..+...+++|+.++.+++++|++.+ ++ +|||+||..++.. . .+.|+.
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~ 187 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA 187 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHH
Confidence 99999997542 3445678999999999999999987 76 9999999877532 1 278999
Q ss_pred hHHHHHHHHHhh----CCCeEEEecCeeecCCCh--h----HHHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE----LPWATIMRPAAMIGTEDR--L----LNKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 138 ~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~--~----~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+|..+|.+++.+ +++++++|++.+|||+.. + +..+...+..+. ....+++++..++++|++|+|++++.
T Consensus 188 sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~ 267 (381)
T 1n7h_A 188 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL 267 (381)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHH
Confidence 999999998765 688999999999998642 2 233333344443 33456888899999999999999999
Q ss_pred HhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCcc-ccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHh
Q 047628 207 ALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY-VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285 (327)
Q Consensus 207 ~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
+++++. +++||+++++.+|+.|+++.+.+.+|.+... ..+.. ... .|..
T Consensus 268 ~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~--------------~~~---~~~~---------- 317 (381)
T 1n7h_A 268 MLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ--------------RYF---RPAE---------- 317 (381)
T ss_dssp HHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG--------------GGS---CSSC----------
T ss_pred HHhCCC---CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCc--------------ccC---Cccc----------
Confidence 998764 4799999999999999999999999975321 11110 000 0000
Q ss_pred hhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 286 YTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 286 ~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.....++. +++++.|||+|+ +++++++++++||+++
T Consensus 318 -~~~~~~d~-~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 318 -VDNLQGDA-SKAKEVLGWKPQVGFEKLVKMMVDEDLEL 354 (381)
T ss_dssp -CCBCCBCC-HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred -cccccCCH-HHHHHhcCCcccCCHHHHHHHHHHHHHhh
Confidence 11223444 588889999995 9999999999998764
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-37 Score=272.43 Aligned_cols=294 Identities=15% Similarity=0.127 Sum_probs=212.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhc--cccE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMA--KANV 79 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~ 79 (327)
|++|+||||||||+||++|++.|++.|++|++++|+++....... .+. ..+++++.+|++|++++.++++ ++|+
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~-~~~v~~~~~Dl~d~~~l~~~~~~~~~d~ 86 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALE-DKGAIIVYGLINEQEAMEKILKEHEIDI 86 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHHHTTCCE
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHH-hCCcEEEEeecCCHHHHHHHHhhCCCCE
Confidence 445799999999999999999999999999999998744322211 110 1368999999999999999999 9999
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC--CCC---C-chHHHhHHHHHHHHHhhCCCe
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS--SSS---P-SRVFSTKAAAEEAVLRELPWA 153 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~--~~~---~-~~y~~~K~~~E~~~~~~~~~~ 153 (327)
|||+++.. |+.++.+++++|++.|.+++||+ |+++.. +.. | ..|+.+|+.+|+++++.++++
T Consensus 87 Vi~~a~~~-----------n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~~g~~~ 154 (346)
T 3i6i_A 87 VVSTVGGE-----------SILDQIALVKAMKAVGTIKRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPF 154 (346)
T ss_dssp EEECCCGG-----------GGGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHHTTCCB
T ss_pred EEECCchh-----------hHHHHHHHHHHHHHcCCceEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHHcCCCE
Confidence 99999863 67788999999999876888886 766553 222 2 789999999999999999999
Q ss_pred EEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecC-CccccHHHH
Q 047628 154 TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG-PDIFTVHEL 232 (327)
Q Consensus 154 ~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~-~~~~s~~el 232 (327)
+++||+.++|.....+..........+.+.++++++..+++++++|+|++++.++.++.. .+++|++.+ ++.+|+.|+
T Consensus 155 tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~i~g~~~~~s~~e~ 233 (346)
T 3i6i_A 155 TYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT-LNKSVHFRPSCNCLNINEL 233 (346)
T ss_dssp EEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG-TTEEEECCCGGGEECHHHH
T ss_pred EEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc-cCeEEEEeCCCCCCCHHHH
Confidence 999999999875332222211222456688889999999999999999999999998875 688999985 488999999
Q ss_pred HHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcc---cCC----Ccccccc-cCC
Q 047628 233 AELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTI---VSD----NALTFQD-LGI 304 (327)
Q Consensus 233 ~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~-lg~ 304 (327)
++.+++.+|.+.++..++.+....... . .+ .|.. ........+..... ++. .....+. .++
T Consensus 234 ~~~~~~~~g~~~~~~~~~~~~~~~~~~------~-~~--~p~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~ 302 (346)
T 3i6i_A 234 ASVWEKKIGRTLPRVTVTEDDLLAAAG------E-NI--IPQS--VVAAFTHDIFIKGCQVNFSIDGPEDVEVTTLYPED 302 (346)
T ss_dssp HHHHHHHHTSCCCEEEECHHHHHHHHH------T-CC--TTHH--HHHHHHHHHHTTCTTTSSCCCSTTEEEHHHHSTTC
T ss_pred HHHHHHHHCCCCceEecCHHHHHHHHh------c-CC--Chhh--hHHHHHHHHhccCCCcccccCCCCcccHHHhCCCC
Confidence 999999999999888888665532221 0 00 1100 00011111111111 111 1112222 478
Q ss_pred ccccccCccHHHHHHHhhC
Q 047628 305 VPHKLKGYPTEYLIWYRKG 323 (327)
Q Consensus 305 ~p~~~~~~l~~~~~~~~~~ 323 (327)
++++++|+++++++|++++
T Consensus 303 ~~t~~~e~l~~~~~~~~~~ 321 (346)
T 3i6i_A 303 SFRTVEECFGEYIVKMEEK 321 (346)
T ss_dssp CCCCHHHHHHHHHCC----
T ss_pred CcCcHHHHHHHHHHHhhcc
Confidence 8999999999999998764
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-37 Score=272.23 Aligned_cols=284 Identities=13% Similarity=0.002 Sum_probs=213.6
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEE-eeCCCChhHHHHHhccc
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPM-KFNPRDDNTIKATMAKA 77 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~-~~Dl~~~~~~~~~~~~~ 77 (327)
|++.+++|+|||||||||||++++++|+++|++|++++|+.++......... ...+++++ .+|+++++++.++++++
T Consensus 5 ~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 5 NAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp TCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred cccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCC
Confidence 3445667899999999999999999999999999999997654221111100 00358888 89999999999999999
Q ss_pred cEEEEccccccc-cCcchhHhhhhHHHHHHHHHHHH-cCCcceEEEEeccCCCCCC------------------------
Q 047628 78 NVVINLIGREYE-TRNYSFEDVNHFMAERIAGIAKE-HGGIMRFIQISCLGASSSS------------------------ 131 (327)
Q Consensus 78 d~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~-~~~v~~~v~~Ss~~v~~~~------------------------ 131 (327)
|+|||+|+.... ..+...+++|+.++.+++++|++ .+ +++|||+||..++...
T Consensus 85 d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 163 (342)
T 1y1p_A 85 AGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKT 163 (342)
T ss_dssp SEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHH
T ss_pred CEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcc
Confidence 999999997543 34456889999999999999985 56 8999999998665210
Q ss_pred --------C-chHHHhHHHHHHHHHhh------CCCeEEEecCeeecCCCh------hHHHHHHHHhhcCceeeecCCCc
Q 047628 132 --------P-SRVFSTKAAAEEAVLRE------LPWATIMRPAAMIGTEDR------LLNKWAQFVKKFNFFPLFGDGST 190 (327)
Q Consensus 132 --------~-~~y~~~K~~~E~~~~~~------~~~~~i~r~~~~~G~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 190 (327)
| +.|+.+|.++|.+++.+ +++++++||+.+||+... .+..+...+..+....+.+++ +
T Consensus 164 ~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 242 (342)
T 1y1p_A 164 LPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM-P 242 (342)
T ss_dssp SCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-C
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-C
Confidence 1 57999999999998765 477999999999998542 566667667666666655554 6
Q ss_pred eecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCC
Q 047628 191 RIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPF 270 (327)
Q Consensus 191 ~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (327)
.++++|++|+|++++.+++++.. .|+.|.. +++.+|+.|+++.+.+.+|.+ .+ +.+
T Consensus 243 ~~~~v~v~Dva~a~~~~~~~~~~-~g~~~~~-~g~~~s~~e~~~~i~~~~~~~-~~-~~~-------------------- 298 (342)
T 1y1p_A 243 PQYYVSAVDIGLLHLGCLVLPQI-ERRRVYG-TAGTFDWNTVLATFRKLYPSK-TF-PAD-------------------- 298 (342)
T ss_dssp SEEEEEHHHHHHHHHHHHHCTTC-CSCEEEE-CCEEECHHHHHHHHHHHCTTS-CC-CCC--------------------
T ss_pred cCCEeEHHHHHHHHHHHHcCccc-CCceEEE-eCCCCCHHHHHHHHHHHCCCc-cC-CCC--------------------
Confidence 78999999999999999987654 4655544 447899999999999999864 11 111
Q ss_pred CCCCCCCCCHHHHHhhhcCcccCCCcccccccCC----ccccccCccHHHHHHHhh
Q 047628 271 PLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI----VPHKLKGYPTEYLIWYRK 322 (327)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~----~p~~~~~~l~~~~~~~~~ 322 (327)
.+.. . .....++. +++++.||| ..++++++++++++||++
T Consensus 299 -~~~~--~--------~~~~~~d~-~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~~ 342 (342)
T 1y1p_A 299 -FPDQ--G--------QDLSKFDT-APSLEILKSLGRPGWRSIEESIKDLVGSETA 342 (342)
T ss_dssp -CCCC--C--------CCCCEECC-HHHHHHHHHTTCCSCCCHHHHHHHHHCCSCC
T ss_pred -CCcc--c--------cccccCCh-HHHHHHHhhcccCCcCCHHHHHHHHHHHhhC
Confidence 0000 0 01134444 588888887 456899999999999864
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=260.78 Aligned_cols=280 Identities=18% Similarity=0.102 Sum_probs=197.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC-CCCCc--hhhhcccCC-CCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDD--PRHLKLMGD-LGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~--~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+++|||||||||||++++++|+++|++|+++.| +++.. ...+..... ..+++++.+|++|++++.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 368999999999999999999999999999998 54321 111111100 02478889999999999999999999999
Q ss_pred ccccccc--cCc-chhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccCCC-C----------C-----------CCc--h
Q 047628 83 LIGREYE--TRN-YSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGAS-S----------S-----------SPS--R 134 (327)
Q Consensus 83 ~a~~~~~--~~~-~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~v~-~----------~-----------~~~--~ 134 (327)
+|+.... ..+ ...+++|+.++.+++++|++. + +++|||+||..+. . + .|. .
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~ 159 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWN 159 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHH
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccccc
Confidence 9975421 122 348899999999999999988 6 8999999997631 1 1 111 6
Q ss_pred HHHhHHHHHHHHHh----hCCCeEEEecCeeecCCCh-----hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLR----ELPWATIMRPAAMIGTEDR-----LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 135 y~~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
|+.+|..+|.++++ .+++++++||+.+||+... .+..+.. ...+....+ +. ..++++|++|+|++++
T Consensus 160 Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~-~~~g~~~~~-~~--~~~~~i~v~Dva~a~~ 235 (322)
T 2p4h_X 160 YAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALV-LVLGKKEQI-GV--TRFHMVHVDDVARAHI 235 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTH-HHHSCGGGC-CE--EEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHH-HHhCCCccC-cC--CCcCEEEHHHHHHHHH
Confidence 99999999998765 3699999999999999642 1111111 122332222 22 3458999999999999
Q ss_pred HHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHh
Q 047628 206 AALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285 (327)
Q Consensus 206 ~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
.+++.+.. .| .|| ++++.+|+.|+++.+.+.++. ..+|... .+ .+.+ .
T Consensus 236 ~~~~~~~~-~g-~~~-~~~~~~s~~e~~~~i~~~~~~----~~~~~~~-------------~~---~~~~----~----- 283 (322)
T 2p4h_X 236 YLLENSVP-GG-RYN-CSPFIVPIEEMSQLLSAKYPE----YQILTVD-------------EL---KEIK----G----- 283 (322)
T ss_dssp HHHHSCCC-CE-EEE-CCCEEEEHHHHHHHHHHHCTT----SCCCCTT-------------TT---TTCC----C-----
T ss_pred HHhhCcCC-CC-CEE-EcCCCCCHHHHHHHHHHhCCC----CCCCCCc-------------cc---cCCC----C-----
Confidence 99987654 45 599 555889999999999887632 1122100 00 0000 0
Q ss_pred hhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCCC
Q 047628 286 YTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 286 ~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~~ 326 (327)
.....+++ +|+ +.|||+|+ +++++++++++|+++.|+.
T Consensus 284 -~~~~~~d~-~k~-~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 322 (322)
T 2p4h_X 284 -ARLPDLNT-KKL-VDAGFDFKYTIEDMFDDAIQCCKEKGYL 322 (322)
T ss_dssp -EECCEECC-HHH-HHTTCCCCCCHHHHHHHHHHHHHHHTCC
T ss_pred -Ccceeccc-HHH-HHhCCccCCCHHHHHHHHHHHHHhcCCC
Confidence 02244555 477 66999998 9999999999999988763
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-36 Score=263.97 Aligned_cols=281 Identities=19% Similarity=0.181 Sum_probs=198.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh--hhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR--HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+|+|||||||||||++|+++|+++|++|+++.|+.+.... .+.......+++++.+|+++++++.++++++|+|||+|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~A 88 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHVA 88 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEES
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEeC
Confidence 5799999999999999999999999999999998654211 11111111358899999999999999999999999999
Q ss_pred ccccc--cCc-chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC-------------CCCC--------C-----chH
Q 047628 85 GREYE--TRN-YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA-------------SSSS--------P-----SRV 135 (327)
Q Consensus 85 ~~~~~--~~~-~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v-------------~~~~--------~-----~~y 135 (327)
+.... ..+ .+.+++|+.++.+++++|++.+++++|||+||.++ .|+. | ..|
T Consensus 89 ~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 168 (338)
T 2rh8_A 89 TPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGY 168 (338)
T ss_dssp SCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCC
T ss_pred CccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchH
Confidence 86432 222 23789999999999999998743899999999652 1111 1 159
Q ss_pred HHhHHHHHHHHHh----hCCCeEEEecCeeecCCCh-----hHHHHHHHHhhcCceeeecC------CCceecceeHHHH
Q 047628 136 FSTKAAAEEAVLR----ELPWATIMRPAAMIGTEDR-----LLNKWAQFVKKFNFFPLFGD------GSTRIQPVYVVDV 200 (327)
Q Consensus 136 ~~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~~------~~~~~~~i~~~D~ 200 (327)
+.+|..+|++++. .+++++++||+.+||+... .+..+... ..+.... ++. +...++++|++|+
T Consensus 169 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~i~v~Dv 246 (338)
T 2rh8_A 169 PASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSL-ITGNEFL-INGMKGMQMLSGSVSIAHVEDV 246 (338)
T ss_dssp TTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHH-HHTCHHH-HHHHHHHHHHHSSEEEEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHH-HcCCccc-cccccccccccCcccEEEHHHH
Confidence 9999999998765 3699999999999999642 11211111 2222211 111 1123589999999
Q ss_pred HHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCH
Q 047628 201 AAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNL 280 (327)
Q Consensus 201 a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (327)
|++++.+++++.. ++.|++++ +.+|+.|+++.+.+.++.. .+|.. +.. .+.
T Consensus 247 a~a~~~~~~~~~~--~~~~~~~~-~~~s~~e~~~~l~~~~~~~----~~~~~-----------~~~-----~~~------ 297 (338)
T 2rh8_A 247 CRAHIFVAEKESA--SGRYICCA-ANTSVPELAKFLSKRYPQY----KVPTD-----------FGD-----FPP------ 297 (338)
T ss_dssp HHHHHHHHHCTTC--CEEEEECS-EEECHHHHHHHHHHHCTTS----CCCCC-----------CTT-----SCS------
T ss_pred HHHHHHHHcCCCc--CCcEEEec-CCCCHHHHHHHHHHhCCCC----CCCCC-----------CCC-----CCc------
Confidence 9999999987654 45798877 5699999999999876421 11200 000 000
Q ss_pred HHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCCC
Q 047628 281 DEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGPK 326 (327)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~~ 326 (327)
.....+++ +|+ +.|||+|+ +++|+++++++|+++.|+.
T Consensus 298 ------~~~~~~d~-~k~-~~lG~~p~~~l~~gl~~~~~~~~~~~~~ 336 (338)
T 2rh8_A 298 ------KSKLIISS-EKL-VKEGFSFKYGIEEIYDESVEYFKAKGLL 336 (338)
T ss_dssp ------SCSCCCCC-HHH-HHHTCCCSCCHHHHHHHHHHHHHHTTCC
T ss_pred ------Ccceeech-HHH-HHhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 01134454 477 67999998 9999999999999998863
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-35 Score=260.75 Aligned_cols=282 Identities=16% Similarity=0.094 Sum_probs=199.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh--hhcccCC-CCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR--HLKLMGD-LGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
++++|||||||||||++|+++|+++|++|++++|+.+.... .+..... ..+++++.+|++|++++.++++++|+|||
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih 83 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFH 83 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEEE
Confidence 45799999999999999999999999999999998764211 1111110 02478899999999999999999999999
Q ss_pred cccccccc--Ccc-hhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC-CC----------CC------------C-chH
Q 047628 83 LIGREYET--RNY-SFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA-SS----------SS------------P-SRV 135 (327)
Q Consensus 83 ~a~~~~~~--~~~-~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v-~~----------~~------------~-~~y 135 (327)
+|+..... .+. ..+++|+.++.+++++|++.+.+++|||+||..+ +. +. + +.|
T Consensus 84 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y 163 (337)
T 2c29_D 84 VATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY 163 (337)
T ss_dssp CCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHH
T ss_pred eccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchH
Confidence 99865321 222 4788999999999999988754789999999762 21 11 1 369
Q ss_pred HHhHHHHHHHHHh----hCCCeEEEecCeeecCCCh-hHHHHHHHH---hhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLR----ELPWATIMRPAAMIGTEDR-LLNKWAQFV---KKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 136 ~~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+.+|..+|.+++. .+++++++||+.+||+... .+....... ..+... ..+.. ....++|++|+|++++.+
T Consensus 164 ~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~ 241 (337)
T 2c29_D 164 FVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYL 241 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHH
Confidence 9999999998754 4699999999999999642 111111111 122211 11111 124599999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
++++.. ++.|++++ +.+|+.|+++.+.+.++. ..+|.. + .+.+ ...
T Consensus 242 ~~~~~~--~~~~~~~~-~~~s~~e~~~~i~~~~~~----~~~~~~-----------------~-~~~~---------~~~ 287 (337)
T 2c29_D 242 FENPKA--EGRYICSS-HDCIILDLAKMLREKYPE----YNIPTE-----------------F-KGVD---------ENL 287 (337)
T ss_dssp HHCTTC--CEEEEECC-EEEEHHHHHHHHHHHCTT----SCCCSC-----------------C-TTCC---------TTC
T ss_pred hcCccc--CceEEEeC-CCCCHHHHHHHHHHHCCC----ccCCCC-----------------C-Cccc---------CCC
Confidence 987654 45787766 569999999999987632 111200 0 0000 001
Q ss_pred cCcccCCCcccccccCCccc-cccCccHHHHHHHhhCCC
Q 047628 288 SDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGGP 325 (327)
Q Consensus 288 ~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g~ 325 (327)
....+++ +++ +.|||+|+ +++|+++++++|+++.|+
T Consensus 288 ~~~~~d~-~k~-~~lG~~p~~~l~e~l~~~~~~~~~~~~ 324 (337)
T 2c29_D 288 KSVCFSS-KKL-TDLGFEFKYSLEDMFTGAVDTCRAKGL 324 (337)
T ss_dssp CCCEECC-HHH-HHHTCCCCCCHHHHHHHHHHHHHHTTS
T ss_pred ccccccH-HHH-HHcCCCcCCCHHHHHHHHHHHHHHcCC
Confidence 2234454 477 78999997 999999999999999875
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-35 Score=268.82 Aligned_cols=295 Identities=14% Similarity=0.097 Sum_probs=213.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch------hhhccc-------CCCCCeeEEeeCCCChhHHHH
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP------RHLKLM-------GDLGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------~~~~~~-------~~~~~v~~~~~Dl~~~~~~~~ 72 (327)
.+|+|||||||||||++|+++|++.|++|++++|+++... ..+... ....+++++.+|+++++.+.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 146 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 146 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence 3579999999999999999999999999999999987311 001000 00146999999999988887
Q ss_pred HhccccEEEEccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC--C-----------C-------CC
Q 047628 73 TMAKANVVINLIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA--S-----------S-------SS 131 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v--~-----------~-------~~ 131 (327)
.+.++|+|||||+.... ......+++|+.++.+++++|++ + +++|||+||..+ . | ..
T Consensus 147 ~~~~~d~Vih~A~~~~~~~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~ 224 (427)
T 4f6c_A 147 LPENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLL 224 (427)
T ss_dssp CSSCCSEEEECCCCC-------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCC
T ss_pred CcCCCCEEEECCcccCCCCCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccccccCCCC
Confidence 77889999999997642 34567889999999999999999 6 799999999887 0 1 12
Q ss_pred CchHHHhHHHHHHHHHh---hCCCeEEEecCeeecCCCh----------hHHHHHHHHhhcCceeeecCCCceecceeHH
Q 047628 132 PSRVFSTKAAAEEAVLR---ELPWATIMRPAAMIGTEDR----------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVV 198 (327)
Q Consensus 132 ~~~y~~~K~~~E~~~~~---~~~~~~i~r~~~~~G~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 198 (327)
.+.|+.+|+.+|.+++. .+++++++||+.+||+... .+..+...+...+.++. +.++..+++++++
T Consensus 225 ~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~ 303 (427)
T 4f6c_A 225 TSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVD 303 (427)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH-HHHTCEECCEEHH
T ss_pred CCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC-ccccceEEEeeHH
Confidence 37899999999999987 5799999999999998542 25566666666666665 4467899999999
Q ss_pred HHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCC
Q 047628 199 DVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLF 278 (327)
Q Consensus 199 D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (327)
|+|++++.++..+. .+++||+++++++|+.|+++.+.+ +| ....+.+.|.......-...+...
T Consensus 304 DvA~ai~~~~~~~~--~g~~~~l~~~~~~s~~el~~~i~~-~g--~~~~~~~~~~~~l~~~~~~~~~~~----------- 367 (427)
T 4f6c_A 304 TTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKR-KE--IELVSDESFNEILQKQDMYETIGL----------- 367 (427)
T ss_dssp HHHHHHHHHTTSCC--CCSEEEESCSCCEEHHHHHHHHHS-SC--CEEECHHHHHHHHHHTTCHHHHHH-----------
T ss_pred HHHHHHHHHHcCCC--CCCEEEecCCCCCcHHHHHHHHHH-cC--CcccCHHHHHHHHHhcCchhhhhh-----------
Confidence 99999999998876 478999999999999999999998 56 455555555544332200001000
Q ss_pred CHHHHHhhhcCcccCCCcccc---cccCCcccccc-CccHHHHHHHhhC
Q 047628 279 NLDEINAYTSDTIVSDNALTF---QDLGIVPHKLK-GYPTEYLIWYRKG 323 (327)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~---~~lg~~p~~~~-~~l~~~~~~~~~~ 323 (327)
..-........++.. +.. +.+|+.+.++. ++++.+++++++.
T Consensus 368 --~~~~~~~~~~~~d~~-~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 368 --TSVDREQQLAMIDTT-LTLKIMNHISEKWPTITNNWLYHWAQYIKTI 413 (427)
T ss_dssp --HHHHHTSEECEECCH-HHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred --hhccccCCceeccHH-HHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 000111223444443 444 45699888666 4888888887763
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-36 Score=260.88 Aligned_cols=282 Identities=16% Similarity=0.101 Sum_probs=208.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+|+||||||||+||++++++|+++| ++|++++|++++.. ..+.. .+++++.+|++|++++.++++++|+|||++
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~----~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a 80 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL----QGAEVVQGDQDDQVIMELALNGAYATFIVT 80 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH----TTCEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH----CCCEEEEecCCCHHHHHHHHhcCCEEEEeC
Confidence 4789999999999999999999998 99999999876532 11221 358899999999999999999999999999
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----CCchHHHhHHHHHHHHHhhCCCeEEEecCe
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS----SPSRVFSTKAAAEEAVLRELPWATIMRPAA 160 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~----~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~ 160 (327)
+..... ..+.|+.++.+++++|++.| +++||++|+.+++.. .+..|+.+|..+|+++++.+++++++||+.
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~gi~~~ilrp~~ 155 (299)
T 2wm3_A 81 NYWESC----SQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLTAGRLAAAHFDGKGEVEEYFRDIGVPMTSVRLPC 155 (299)
T ss_dssp CHHHHT----CHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHTTTSCCCHHHHHHHHHHHHHHHHTCCEEEEECCE
T ss_pred CCCccc----cchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccCCCcccCchhhHHHHHHHHHHHCCCCEEEEeecH
Confidence 853221 23457889999999999998 999999888765432 247899999999999999999999999999
Q ss_pred eecCCChhHHHHHHH-HhhcC--ceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHH
Q 047628 161 MIGTEDRLLNKWAQF-VKKFN--FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237 (327)
Q Consensus 161 ~~G~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~ 237 (327)
+||+... .+... ...+. .+.+ ..++..+++++++|+|++++.++.++..+.|++|++++ +.+|+.|+++.+.
T Consensus 156 ~~~~~~~---~~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~~g-~~~s~~e~~~~~~ 230 (299)
T 2wm3_A 156 YFENLLS---HFLPQKAPDGKSYLLSL-PTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGLST-CRHTAEEYAALLT 230 (299)
T ss_dssp EGGGGGT---TTCCEECTTSSSEEECC-CCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEECCS-EEECHHHHHHHHH
T ss_pred Hhhhchh---hcCCcccCCCCEEEEEe-cCCCCccceecHHHHHHHHHHHHcChhhhCCeEEEeee-ccCCHHHHHHHHH
Confidence 9985321 11111 11221 1222 24677899999999999999999875311578999997 6899999999999
Q ss_pred HHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccccccCccHHHH
Q 047628 238 DTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKGYPTEYL 317 (327)
Q Consensus 238 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~~~~~l~~~~ 317 (327)
+.+|+++.+.++|.+..+... .|.. .....+...+.... ..+....+.+|.+|++|+|++++..
T Consensus 231 ~~~g~~~~~~~~~~~~~~~~g-------------~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~ 294 (299)
T 2wm3_A 231 KHTRKVVHDAKMTPEDYEKLG-------------FPGA-RDLANMFRFYALRP--DRDIELTLRLNPKALTLDQWLEQHK 294 (299)
T ss_dssp HHHSSCEEECCCCTHHHHTTC-------------STTH-HHHHHHHHHHTTCC--CCCHHHHHHHCTTCCCHHHHHHHHG
T ss_pred HHHCCCceeEecCHHHHHhcC-------------CCcH-HHHHHHHHHHHhcC--CCCHHHHHHhCCCCCCHHHHHHhCh
Confidence 999999888888877665311 1110 00011111122221 1122344668999999999987764
Q ss_pred H
Q 047628 318 I 318 (327)
Q Consensus 318 ~ 318 (327)
.
T Consensus 295 ~ 295 (299)
T 2wm3_A 295 G 295 (299)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=279.03 Aligned_cols=272 Identities=13% Similarity=0.144 Sum_probs=195.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|+|||||||||||++|++.|+++|++|++++|+..+. ..+.+|+.+ .+.++++++|+|||||+.
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------~~v~~d~~~--~~~~~l~~~D~Vih~A~~ 211 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------GKRFWDPLN--PASDLLDGADVLVHLAGE 211 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------TCEECCTTS--CCTTTTTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------cceeecccc--hhHHhcCCCCEEEECCCC
Confidence 68999999999999999999999999999999987652 125667764 345677899999999997
Q ss_pred ccc-----cCcchhHhhhhHHHHHHHHH-HHHcCCcceEEEEeccCCCC-C---------C---CchHHHhHHHHHHHHH
Q 047628 87 EYE-----TRNYSFEDVNHFMAERIAGI-AKEHGGIMRFIQISCLGASS-S---------S---PSRVFSTKAAAEEAVL 147 (327)
Q Consensus 87 ~~~-----~~~~~~~~~n~~~~~~l~~a-~~~~~~v~~~v~~Ss~~v~~-~---------~---~~~y~~~K~~~E~~~~ 147 (327)
... ..+...+++|+.++.+|+++ ++..+ +++|||+||.++++ . . .+.|+.+|...|..+.
T Consensus 212 ~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~ 290 (516)
T 3oh8_A 212 PIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATA 290 (516)
T ss_dssp -----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH
Confidence 532 23345788999999999999 55666 89999999988765 1 1 1678889988887654
Q ss_pred ---hhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCC
Q 047628 148 ---RELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP 224 (327)
Q Consensus 148 ---~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~ 224 (327)
..+++++++||+.+||++++.+..+...+..+. ...++++++.++++|++|+|++++.+++++.. +++||++++
T Consensus 291 ~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~-~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~--~g~~ni~~~ 367 (516)
T 3oh8_A 291 PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGL-GGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQI--SGPINAVAP 367 (516)
T ss_dssp HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC----CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTC--CEEEEESCS
T ss_pred HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCC-CcccCCCCceEceEeHHHHHHHHHHHHhCccc--CCcEEEECC
Confidence 447999999999999998877777766555433 34568899999999999999999999998765 569999999
Q ss_pred ccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHH-HHHhhhcCcccCCCcccccccC
Q 047628 225 DIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD-EINAYTSDTIVSDNALTFQDLG 303 (327)
Q Consensus 225 ~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~lg 303 (327)
+.+|+.|+++.+++.+|.+. ..++|.+..+.... .. ....+..+...++. +++ .||
T Consensus 368 ~~~s~~el~~~i~~~~g~~~-~~~~p~~~~~~~~g--------------------~~~~~~~~~~~~~~~~~-kl~-~lG 424 (516)
T 3oh8_A 368 NPVSNADMTKILATSMHRPA-FIQIPSLGPKILLG--------------------SQGAEELALASQRTAPA-ALE-NLS 424 (516)
T ss_dssp CCEEHHHHHHHTTC------------------------------------------CCGGGGGGCEEEECCH-HHH-HTT
T ss_pred CCCCHHHHHHHHHHHhCCCC-CCCCCHHHHHHHhC--------------------CchhHHHhhcCCeechH-HHH-HCC
Confidence 99999999999999999775 44566544432111 00 01112223344443 664 689
Q ss_pred Cccc-c-ccCccHHHHHHH
Q 047628 304 IVPH-K-LKGYPTEYLIWY 320 (327)
Q Consensus 304 ~~p~-~-~~~~l~~~~~~~ 320 (327)
|+|+ + +++++++++++.
T Consensus 425 ~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 425 HTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp CCCSCSSHHHHHHHHHTCC
T ss_pred CCCCCCCHHHHHHHHhCcc
Confidence 9998 4 999999888764
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=253.09 Aligned_cols=231 Identities=18% Similarity=0.193 Sum_probs=184.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+++||||||||+||++++++|+++|++|++++|+++.....+..+. ..+++++.+|++|++++.++++++|+|||+++.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~-~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~ 89 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQ-SLGAIIVKGELDEHEKLVELMKKVDVVISALAF 89 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHH-HTTCEEEECCTTCHHHHHHHHTTCSEEEECCCG
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhh-cCCCEEEEecCCCHHHHHHHHcCCCEEEECCch
Confidence 4589999999999999999999999999999998763222221110 035899999999999999999999999999986
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC--C---C--chHHHhHHHHHHHHHhhCCCeEEEecC
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS--S---P--SRVFSTKAAAEEAVLRELPWATIMRPA 159 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~--~---~--~~y~~~K~~~E~~~~~~~~~~~i~r~~ 159 (327)
.. +.++.+++++|++.+++++||+ |+++...+ . | ..| .+|..+|+++++.+++++++||+
T Consensus 90 ~~-----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~~lr~~ 156 (318)
T 2r6j_A 90 PQ-----------ILDQFKILEAIKVAGNIKRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRAIEEANIPYTYVSAN 156 (318)
T ss_dssp GG-----------STTHHHHHHHHHHHCCCCEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHHTTCCBEEEECC
T ss_pred hh-----------hHHHHHHHHHHHhcCCCCEEEe-eccccCcccccCCCCcchhH-HHHHHHHHHHHhcCCCeEEEEcc
Confidence 42 3567899999998854789985 66654321 2 2 357 99999999999999999999999
Q ss_pred eeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCC-ccccHHHHHHHHHH
Q 047628 160 AMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTVHELAELMYD 238 (327)
Q Consensus 160 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~-~~~s~~el~~~i~~ 238 (327)
.+++ +++..+.......+.+.++++++..+++++++|+|++++.++.++.. .+++|++.++ +.+|+.|+++.+.+
T Consensus 157 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~~~g~~~~~s~~e~~~~~~~ 232 (318)
T 2r6j_A 157 CFAS---YFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA-LNRVVIYRPSTNIITQLELISRWEK 232 (318)
T ss_dssp EEHH---HHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG-TTEEEECCCGGGEEEHHHHHHHHHH
T ss_pred eehh---hhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc-cCeEEEecCCCCccCHHHHHHHHHH
Confidence 8874 33333332223345677778888999999999999999999998765 5788888754 78999999999999
Q ss_pred HhhcCCccccCChHHHH
Q 047628 239 TIREYPHYVKVPFPVAK 255 (327)
Q Consensus 239 ~~g~~~~~~~~~~~~~~ 255 (327)
.+|++.++..+|.+...
T Consensus 233 ~~g~~~~~~~~~~~~~~ 249 (318)
T 2r6j_A 233 KIGKKFKKIHVPEEEIV 249 (318)
T ss_dssp HHTCCCEEEEECHHHHH
T ss_pred HhCCCCceeecCHHHHH
Confidence 99999998888876553
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-34 Score=262.58 Aligned_cols=253 Identities=13% Similarity=0.093 Sum_probs=200.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC---CCEEEEeeCCCCCchh--hhcc-cCC-------------CCCeeEEeeCCC
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM---GSQVLVPFRGCEDDPR--HLKL-MGD-------------LGQIVPMKFNPR 65 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~---g~~V~~~~R~~~~~~~--~~~~-~~~-------------~~~v~~~~~Dl~ 65 (327)
..+|+|||||||||||++|+++|++. |++|++++|+.+.... .+.. ... ..+++++.+|++
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~ 150 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKS 150 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECC
Confidence 34689999999999999999999998 8999999998764211 1110 000 147999999998
Q ss_pred ------ChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC-------
Q 047628 66 ------DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP------- 132 (327)
Q Consensus 66 ------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~------- 132 (327)
+.+.+.++++++|+|||||+..........+++|+.++.+++++|++.+ +++|||+||.+++....
T Consensus 151 ~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~~~~~~~E~ 229 (478)
T 4dqv_A 151 EPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAIEPSAFTED 229 (478)
T ss_dssp SGGGGCCHHHHHHHHHHCCEEEECCSSCSBSSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTSCTTTCCSS
T ss_pred CcccCCCHHHHHHHHcCCCEEEECccccCCcCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCccCCCCcCCc
Confidence 6678999999999999999987665556788999999999999999998 99999999987754311
Q ss_pred -----------------chHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC--------hhHHHHHHHHhhcCcee
Q 047628 133 -----------------SRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED--------RLLNKWAQFVKKFNFFP 183 (327)
Q Consensus 133 -----------------~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~--------~~~~~~~~~~~~~~~~~ 183 (327)
+.|+.+|+.+|.+++.+ +++++++||+.+||+.. .++..+.......+.++
T Consensus 230 ~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g~~P 309 (478)
T 4dqv_A 230 ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGIAP 309 (478)
T ss_dssp SCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHCEEE
T ss_pred ccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcCccc
Confidence 33999999999999875 79999999999999742 24555555444444433
Q ss_pred ee--c---C---CCceecceeHHHHHHHHHHHhhc----CCCCCCceEEecCCcc--ccHHHHHHHHHHHhhcCCccc-c
Q 047628 184 LF--G---D---GSTRIQPVYVVDVAAAVTAALKD----DGTSMGKIYELGGPDI--FTVHELAELMYDTIREYPHYV-K 248 (327)
Q Consensus 184 ~~--~---~---~~~~~~~i~~~D~a~~~~~~l~~----~~~~~~~~~~v~~~~~--~s~~el~~~i~~~~g~~~~~~-~ 248 (327)
.. + + ++..++++|++|+|++++.++.. +.. .+++||+++++. +|+.|+++.+.+. |.+.+.. +
T Consensus 310 ~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~-~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~~~~i~~ 387 (478)
T 4dqv_A 310 RSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLA-GFATYHVMNPHDDGIGLDEYVDWLIEA-GYPIRRIDD 387 (478)
T ss_dssp SCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCC-SEEEEEESCCCCSSCSHHHHHHHHHHT-TCSCEEESS
T ss_pred ccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCC-CCceEEecCCCCCCcCHHHHHHHHHHc-CCCcccCCC
Confidence 21 1 1 26789999999999999999886 444 578999999988 9999999999996 8777655 7
Q ss_pred CChHHHHHhhhH
Q 047628 249 VPFPVAKAVAMP 260 (327)
Q Consensus 249 ~~~~~~~~~~~~ 260 (327)
++.|+.+.....
T Consensus 388 ~~~w~~~l~~~~ 399 (478)
T 4dqv_A 388 FAEWLQRFEASL 399 (478)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 888988876653
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=254.34 Aligned_cols=230 Identities=13% Similarity=0.127 Sum_probs=193.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+++|+||||||||+||++++++|++. |+ +|++++|++.+......... ..+++++.+|++|++++.++++++|+|||
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih 97 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN-DPRMRFFIGDVRDLERLNYALEGVDICIH 97 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC-CTTEEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHhcCCEEEE
Confidence 45689999999999999999999999 97 99999998654322211111 14689999999999999999999999999
Q ss_pred ccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhh-------CC
Q 047628 83 LIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRE-------LP 151 (327)
Q Consensus 83 ~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~-------~~ 151 (327)
+|+.... ..+...+++|+.++.+++++|++.+ +++||++||..+.. ..+.|+.+|..+|.+++.. ++
T Consensus 98 ~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~g~ 175 (344)
T 2gn4_A 98 AAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAAN-PINLYGATKLCSDKLFVSANNFKGSSQT 175 (344)
T ss_dssp CCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSS-CCSHHHHHHHHHHHHHHHGGGCCCSSCC
T ss_pred CCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccCC-CccHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9987532 3446788999999999999999998 99999999987653 3478999999999999874 38
Q ss_pred CeEEEecCeeecCCChhHHHHHHHHhhcC-ceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHH
Q 047628 152 WATIMRPAAMIGTEDRLLNKWAQFVKKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230 (327)
Q Consensus 152 ~~~i~r~~~~~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~ 230 (327)
+++++||+.+||+....++.+...+..+. .+++. +++..+++++++|+|++++.+++++. .|++|++.++ .+|+.
T Consensus 176 ~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l~~~~--~g~~~~~~~~-~~s~~ 251 (344)
T 2gn4_A 176 QFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSLKRMH--GGEIFVPKIP-SMKMT 251 (344)
T ss_dssp EEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHHHHCC--SSCEEEECCC-EEEHH
T ss_pred EEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHHhhcc--CCCEEecCCC-cEEHH
Confidence 99999999999998888888887777776 67664 67788899999999999999999875 4789999886 69999
Q ss_pred HHHHHHHHHhh
Q 047628 231 ELAELMYDTIR 241 (327)
Q Consensus 231 el~~~i~~~~g 241 (327)
|+++.+.+.++
T Consensus 252 el~~~i~~~~~ 262 (344)
T 2gn4_A 252 DLAKALAPNTP 262 (344)
T ss_dssp HHHHHHCTTCC
T ss_pred HHHHHHHHhCC
Confidence 99999987553
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=242.10 Aligned_cols=212 Identities=20% Similarity=0.249 Sum_probs=178.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCe-eEEeeCCCChhHHHHHhccccEEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQI-VPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v-~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
.+++|+||||||||+||++++++|+++|++|++++|++++... +.. .++ +++.+|++ +.+.+++.++|+|||
T Consensus 18 ~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-~~~----~~~~~~~~~Dl~--~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 18 YFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRE----RGASDIVVANLE--EDFSHAFASIDAVVF 90 (236)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHH----TTCSEEEECCTT--SCCGGGGTTCSEEEE
T ss_pred CcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH-HHh----CCCceEEEcccH--HHHHHHHcCCCEEEE
Confidence 3567899999999999999999999999999999998766432 222 258 99999998 778888999999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-----CchHHHhHHHHHHHHHhhCCCeEEEe
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-----PSRVFSTKAAAEEAVLRELPWATIMR 157 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-----~~~y~~~K~~~E~~~~~~~~~~~i~r 157 (327)
+||..........+++|+.++.+++++|++.+ +++||++||++..... ...|+.+|.++|++++..+++++++|
T Consensus 91 ~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~gi~~~~lr 169 (236)
T 3e8x_A 91 AAGSGPHTGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELKRSSLDYTIVR 169 (236)
T ss_dssp CCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHHHSSSEEEEEE
T ss_pred CCCCCCCCCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHHHCCCCEEEEe
Confidence 99987666667788999999999999999998 8999999998776442 37899999999999999999999999
Q ss_pred cCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHH
Q 047628 158 PAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMY 237 (327)
Q Consensus 158 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~ 237 (327)
|+.++|+.. .+.+.....+....++++++|+|++++.+++++.. .|++|+++++ .+++.|+++.++
T Consensus 170 pg~v~~~~~------------~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 170 PGPLSNEES------------TGKVTVSPHFSEITRSITRHDVAKVIAELVDQQHT-IGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp ECSEECSCC------------CSEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGGG-TTEEEEEEEC-SEEHHHHHHTC-
T ss_pred CCcccCCCC------------CCeEEeccCCCcccCcEeHHHHHHHHHHHhcCccc-cCCeEEEeCC-CcCHHHHHHHhc
Confidence 999998743 22344444555678999999999999999998865 7899999987 599999998765
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-34 Score=244.12 Aligned_cols=252 Identities=16% Similarity=0.125 Sum_probs=197.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~ 85 (327)
|+||||||||+||++++++|++ |++|++++|+++.. ++ +.+|+++++++.+++++ +|+|||+|+
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~~a~ 66 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----------GG---YKLDLTDFPRLEDFIIKKRPDVIINAAA 66 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----------TC---EECCTTSHHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----------CC---ceeccCCHHHHHHHHHhcCCCEEEECCc
Confidence 5799999999999999999995 89999999987431 12 78999999999999987 999999999
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------CchHHHhHHHHHHHHHhh
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------PSRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------~~~y~~~K~~~E~~~~~~ 149 (327)
.... ......+++|+.++.+++++|++.+ + +||++||..++... .+.|+.+|.++|.+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~- 143 (273)
T 2ggs_A 67 MTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ- 143 (273)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC-
T ss_pred ccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC-
Confidence 7542 2445688999999999999999988 6 99999998775322 26899999999999988
Q ss_pred CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccH
Q 047628 150 LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTV 229 (327)
Q Consensus 150 ~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~ 229 (327)
++++++||+.+||+ ..+...+...+..+..+...++ .+++++++|+|++++.+++++. +++||+++ +.+|+
T Consensus 144 -~~~~~iR~~~v~G~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~~---~g~~~i~~-~~~s~ 214 (273)
T 2ggs_A 144 -DDSLIIRTSGIFRN-KGFPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELRK---TGIIHVAG-ERISR 214 (273)
T ss_dssp -TTCEEEEECCCBSS-SSHHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHTC---CEEEECCC-CCEEH
T ss_pred -CCeEEEeccccccc-cHHHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcCc---CCeEEECC-CcccH
Confidence 88999999999983 3455555555555666666544 7899999999999999998764 34999999 99999
Q ss_pred HHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc--
Q 047628 230 HELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-- 307 (327)
Q Consensus 230 ~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-- 307 (327)
.|+++.+.+.+|.+.++...+ +.. .+ .+. ......++. +|+++.|||+|+
T Consensus 215 ~e~~~~~~~~~g~~~~~~~~~-~~~--------------~~-~~~-----------~~~~~~~d~-~k~~~~lG~~p~~~ 266 (273)
T 2ggs_A 215 FELALKIKEKFNLPGEVKEVD-EVR--------------GW-IAK-----------RPYDSSLDS-SRARKILSTDFYTL 266 (273)
T ss_dssp HHHHHHHHHHTTCCSCEEEES-SCT--------------TC-CSC-----------CCSBCCBCC-HHHHHHCSSCCCSC
T ss_pred HHHHHHHHHHhCCChhhcccc-ccc--------------cc-ccC-----------CCcccccCH-HHHHHHhCCCCCCc
Confidence 999999999999876543211 000 00 000 012345555 589889999994
Q ss_pred cccCcc
Q 047628 308 KLKGYP 313 (327)
Q Consensus 308 ~~~~~l 313 (327)
++++++
T Consensus 267 ~l~~~~ 272 (273)
T 2ggs_A 267 DLDGMV 272 (273)
T ss_dssp CGGGCC
T ss_pred cccccc
Confidence 788776
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-34 Score=267.46 Aligned_cols=292 Identities=14% Similarity=0.097 Sum_probs=212.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh------hhccc-------CCCCCeeEEeeCCCChhHHHHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR------HLKLM-------GDLGQIVPMKFNPRDDNTIKAT 73 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~------~~~~~-------~~~~~v~~~~~Dl~~~~~~~~~ 73 (327)
+|+|||||||||||++|+++|++.|++|++++|+...... .+... ....+++++.+|+.+++.+. +
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 228 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 228 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence 5799999999999999999999899999999998773210 00000 00147999999999988777 7
Q ss_pred hccccEEEEccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC--C-----------CC-------CC
Q 047628 74 MAKANVVINLIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA--S-----------SS-------SP 132 (327)
Q Consensus 74 ~~~~d~vi~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v--~-----------~~-------~~ 132 (327)
+.++|+|||||+.... .....+.++|+.++.+++++|++ + +++|||+||.++ + |. ..
T Consensus 229 ~~~~D~Vih~Aa~~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~ 306 (508)
T 4f6l_B 229 PENMDTIIHAGARTDHFGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLT 306 (508)
T ss_dssp SSCCSEEEECCCC--------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCC
T ss_pred ccCCCEEEECCceecCCCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCcccccccccccccCC
Confidence 7889999999997542 34467889999999999999999 5 689999999888 1 11 22
Q ss_pred chHHHhHHHHHHHHHh---hCCCeEEEecCeeecCCCh----------hHHHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 133 SRVFSTKAAAEEAVLR---ELPWATIMRPAAMIGTEDR----------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 133 ~~y~~~K~~~E~~~~~---~~~~~~i~r~~~~~G~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
+.|+.+|+.+|++++. .+++++++||+.+||+... .+..+...+...+.++. +.++..+++++++|
T Consensus 307 ~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~g~~~~~~v~v~D 385 (508)
T 4f6l_B 307 SPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV-SMAEMPVDFSFVDT 385 (508)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET-TGGGSEEECEEHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC-CccCceEEEEcHHH
Confidence 7899999999999987 4699999999999998542 25566666666666665 34678999999999
Q ss_pred HHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCC
Q 047628 200 VAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFN 279 (327)
Q Consensus 200 ~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (327)
+|++++.++.++. .+++||+++++.+|+.|+++.+++.. .+..+.+.|...+...-...+..
T Consensus 386 vA~ai~~~~~~~~--~~~~~nl~~~~~~s~~el~~~i~~~~---~~~~~~~~w~~~l~~~~~~~~~~------------- 447 (508)
T 4f6l_B 386 TARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKRKE---IELVSDESFNEILQKQDMYETIG------------- 447 (508)
T ss_dssp HHHHHHHHTTBCC--SCSEEEESCSCEEEHHHHHHHHHSSC---CEEECHHHHHHHHHTTCCHHHHH-------------
T ss_pred HHHHHHHHHhCCC--CCCEEEeCCCCCCCHHHHHHHHHHcC---CcccCHHHHHHHHHhcCCccchh-------------
Confidence 9999999999876 47899999999999999999999865 45555565555433210000000
Q ss_pred HHHH-HhhhcCcccCCCcccc---cccCCccccc-cCccHHHHHHHhh
Q 047628 280 LDEI-NAYTSDTIVSDNALTF---QDLGIVPHKL-KGYPTEYLIWYRK 322 (327)
Q Consensus 280 ~~~~-~~~~~~~~~~~~~~~~---~~lg~~p~~~-~~~l~~~~~~~~~ 322 (327)
... ........++.. +.. +.+|+.+..+ +++++++++++++
T Consensus 448 -~~~~~~~~~~~~~d~~-~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~ 493 (508)
T 4f6l_B 448 -LTSVDREQQLAMIDTT-LTLKIMNHISEKWPTITNNWLYHWAQYIKT 493 (508)
T ss_dssp -HHHTGGGSEECEECCH-HHHHHHHHHSCCCCCCCHHHHHHHHHHHHH
T ss_pred -cccccccCcceecchH-HHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence 000 011123344433 443 4468888755 4678888888765
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=240.11 Aligned_cols=208 Identities=17% Similarity=0.087 Sum_probs=164.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
||+|||||||||||++++++|+++|++|++++|++++.... . .+++++.+|++|++++.++++++|+|||+++.
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~-----~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 77 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-N-----EHLKVKKADVSSLDEVCEVCKGADAVISAFNP 77 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-C-----TTEEEECCCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-c-----CceEEEEecCCCHHHHHHHhcCCCEEEEeCcC
Confidence 47999999999999999999999999999999987653211 1 46999999999999999999999999999987
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------CchHHHhHHHHHHHHHhh----C
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------PSRVFSTKAAAEEAVLRE----L 150 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------~~~y~~~K~~~E~~~~~~----~ 150 (327)
.... ...+++|+.++.++++++++.+ +++||++||.+++... .+.|+.+|..+|.+++.. +
T Consensus 78 ~~~~--~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~ 154 (227)
T 3dhn_A 78 GWNN--PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKE 154 (227)
T ss_dssp --------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGCCS
T ss_pred CCCC--hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhccC
Confidence 5332 2377889999999999999998 9999999998764221 278999999999766544 5
Q ss_pred CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHH
Q 047628 151 PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230 (327)
Q Consensus 151 ~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~ 230 (327)
++++++||+.+||++...-. ...+...++. .++. ++++|++|+|++++.+++++.. .|++|+++++++.+++
T Consensus 155 ~~~~ilrp~~v~g~~~~~~~-----~~~~~~~~~~-~~~~-~~~i~~~Dva~ai~~~l~~~~~-~g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 155 IDWVFFSPAADMRPGVRTGR-----YRLGKDDMIV-DIVG-NSHISVEDYAAAMIDELEHPKH-HQERFTIGYLEHHHHH 226 (227)
T ss_dssp SEEEEEECCSEEESCCCCCC-----CEEESSBCCC-CTTS-CCEEEHHHHHHHHHHHHHSCCC-CSEEEEEECCSCCC--
T ss_pred ccEEEEeCCcccCCCccccc-----eeecCCCccc-CCCC-CcEEeHHHHHHHHHHHHhCccc-cCcEEEEEeehhcccC
Confidence 99999999999998653210 1112222332 1222 8999999999999999999987 8999999999998876
Q ss_pred H
Q 047628 231 E 231 (327)
Q Consensus 231 e 231 (327)
+
T Consensus 227 ~ 227 (227)
T 3dhn_A 227 H 227 (227)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-34 Score=254.47 Aligned_cols=219 Identities=15% Similarity=0.203 Sum_probs=189.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|+|||||||||||++|+++|+++|+ +|++++|+ .+++++.++++++|+|||+|+.
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~------------------------~d~~~l~~~~~~~d~Vih~a~~ 56 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ------------------------TKEEELESALLKADFIVHLAGV 56 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT------------------------CCHHHHHHHHHHCSEEEECCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC------------------------CCHHHHHHHhccCCEEEECCcC
Confidence 6899999999999999999999998 88887664 4788999999999999999998
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEeccCCCCCCCchHHHhHHHHHHHHHh----hCCCeEEEecCee
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCLGASSSSPSRVFSTKAAAEEAVLR----ELPWATIMRPAAM 161 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~----~~~~~~i~r~~~~ 161 (327)
.....+...+++|+.++.+++++|++.+ ++ +|||+||..++. .+.|+.+|..+|++++. .+++++++||+.+
T Consensus 57 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~--~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v 133 (369)
T 3st7_A 57 NRPEHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ--DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNL 133 (369)
T ss_dssp BCTTCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS--CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC--CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCce
Confidence 7766677788999999999999999998 77 999999999886 67899999999999987 5799999999999
Q ss_pred ecCCC-----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCC-CceEEecCCccccHHHHHHH
Q 047628 162 IGTED-----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM-GKIYELGGPDIFTVHELAEL 235 (327)
Q Consensus 162 ~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~-~~~~~v~~~~~~s~~el~~~ 235 (327)
||++. +++..+...+..+..+.+ ++++..++++|++|+|++++.+++++.. . +++||+++++.+|+.|+++.
T Consensus 134 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~~~~~~i~~~~~~s~~e~~~~ 211 (369)
T 3st7_A 134 FGKWCKPNYNSVIATFCYKIARNEEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPT-IENGVPTVPNVFKVTLGEIVDL 211 (369)
T ss_dssp ECTTCCTTSSCHHHHHHHHHHTTCCCCC-SCTTCEEEEEEHHHHHHHHHHHHHTCCC-EETTEECCSCCEEEEHHHHHHH
T ss_pred eCCCCCCCcchHHHHHHHHHHcCCCeEe-cCCCeEEEEEEHHHHHHHHHHHHhCCcc-cCCceEEeCCCCceeHHHHHHH
Confidence 99854 467777777777766665 5788999999999999999999998875 4 78999999999999999999
Q ss_pred HHHHhhcCCccc--cCChHHHH
Q 047628 236 MYDTIREYPHYV--KVPFPVAK 255 (327)
Q Consensus 236 i~~~~g~~~~~~--~~~~~~~~ 255 (327)
+++.+|.+.... ..+.+..+
T Consensus 212 ~~~~~g~~~~~~~~~~~~~~~~ 233 (369)
T 3st7_A 212 LYKFKQSRLDRTLPKLDNLFEK 233 (369)
T ss_dssp HHHHHHHHHHTCCCCTTSHHHH
T ss_pred HHHHhCCCcccccCCCCCHHHH
Confidence 999999764332 33444444
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-33 Score=232.81 Aligned_cols=199 Identities=18% Similarity=0.260 Sum_probs=169.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC-hhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD-DNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~d~vi~~a~~ 86 (327)
|+||||||||+||++++++|+++|++|++++|++++.... .+++++.+|++| ++++.++++++|+|||+|+.
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~ 73 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGS 73 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------CCceEEEecccCCHHHHHHHHcCCCEEEECCcC
Confidence 5899999999999999999999999999999987653321 369999999999 99999999999999999997
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC---------chHHHhHHHHHHHH-HhhCCCeEEE
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP---------SRVFSTKAAAEEAV-LRELPWATIM 156 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~---------~~y~~~K~~~E~~~-~~~~~~~~i~ 156 (327)
... ..+++|+.++.+++++|++.+ +++||++||.+++...+ +.|+.+|..+|+++ +..+++++++
T Consensus 74 ~~~----~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~~~~~i~~~il 148 (219)
T 3dqp_A 74 GGK----SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTII 148 (219)
T ss_dssp TTS----SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHHHSCCCEEEEE
T ss_pred CCC----CcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHHhccCCcEEEE
Confidence 642 367889999999999999998 99999999988765432 58999999999999 6677999999
Q ss_pred ecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHH
Q 047628 157 RPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235 (327)
Q Consensus 157 r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~ 235 (327)
||+.+||+... +.+.. ++..+++++++|+|++++.+++++.. .+++||+++++ .++.|+.+.
T Consensus 149 rp~~v~g~~~~------------~~~~~---~~~~~~~i~~~Dva~~i~~~l~~~~~-~g~~~~i~~g~-~~~~e~~~~ 210 (219)
T 3dqp_A 149 QPGALTEEEAT------------GLIDI---NDEVSASNTIGDVADTIKELVMTDHS-IGKVISMHNGK-TAIKEALES 210 (219)
T ss_dssp EECSEECSCCC------------SEEEE---SSSCCCCEEHHHHHHHHHHHHTCGGG-TTEEEEEEECS-EEHHHHHHT
T ss_pred eCceEecCCCC------------Ccccc---CCCcCCcccHHHHHHHHHHHHhCccc-cCcEEEeCCCC-ccHHHHHHH
Confidence 99999987431 11222 25678999999999999999998876 78999998864 999988763
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-33 Score=244.55 Aligned_cols=231 Identities=16% Similarity=0.169 Sum_probs=182.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC-CCc----hhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC-EDD----PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~----~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+|+|+||||||+||++++++|+++|++|++++|++ +.. ...+.... ..+++++.+|++|++++.++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~-~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFR-SMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhh-cCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 47899999999999999999999999999999986 321 11111110 1358999999999999999999999999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC--C---C--chHHHhHHHHHHHHHhhCCCeE
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS--S---P--SRVFSTKAAAEEAVLRELPWAT 154 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~--~---~--~~y~~~K~~~E~~~~~~~~~~~ 154 (327)
|+++... +.++.+++++|++.|.+++||+ |+++...+ . | ..| .+|..+|+++++.+++++
T Consensus 83 ~~a~~~~-----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~ 149 (321)
T 3c1o_A 83 SALPFPM-----------ISSQIHIINAIKAAGNIKRFLP-SDFGCEEDRIKPLPPFESVL-EKKRIIRRAIEAAALPYT 149 (321)
T ss_dssp ECCCGGG-----------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCGGGCCCCHHHHHHH-HHHHHHHHHHHHHTCCBE
T ss_pred ECCCccc-----------hhhHHHHHHHHHHhCCccEEec-cccccCccccccCCCcchHH-HHHHHHHHHHHHcCCCeE
Confidence 9998642 3567899999998854789984 66554211 2 2 468 999999999999999999
Q ss_pred EEecCeeecCCChhHHHHHHH---HhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecC-CccccHH
Q 047628 155 IMRPAAMIGTEDRLLNKWAQF---VKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG-PDIFTVH 230 (327)
Q Consensus 155 i~r~~~~~G~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~-~~~~s~~ 230 (327)
++||+.++|. ++..+... ....+.+.++++++..+++++++|+|++++.++.++.. .+++|++.+ ++.+|+.
T Consensus 150 ~lrp~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~g~~~~~~g~~~~~t~~ 225 (321)
T 3c1o_A 150 YVSANCFGAY---FVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC-CNRIVIYRPPKNIISQN 225 (321)
T ss_dssp EEECCEEHHH---HHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG-TTEEEECCCGGGEEEHH
T ss_pred EEEeceeccc---cccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc-cCeEEEEeCCCCcccHH
Confidence 9999998853 33332221 12345567778888999999999999999999998765 678889876 4789999
Q ss_pred HHHHHHHHHhhcCCccccCChHHHH
Q 047628 231 ELAELMYDTIREYPHYVKVPFPVAK 255 (327)
Q Consensus 231 el~~~i~~~~g~~~~~~~~~~~~~~ 255 (327)
|+++.+.+.+|++..+..+|.+...
T Consensus 226 e~~~~~~~~~g~~~~~~~~~~~~~~ 250 (321)
T 3c1o_A 226 ELISLWEAKSGLSFKKVHMPDEQLV 250 (321)
T ss_dssp HHHHHHHHHHTSCCCEEEECHHHHH
T ss_pred HHHHHHHHHcCCcceeeeCCHHHHH
Confidence 9999999999999988888865543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=244.08 Aligned_cols=234 Identities=18% Similarity=0.192 Sum_probs=184.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hh---hhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PR---HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~---~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+|+|+||||||+||++++++|+++|++|++++|+.+.. .. .+..+. ..+++++.+|++|++++.++++++|+|||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~-~~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 82 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK-QLGAKLIEASLDDHQRLVDALKQVDVVIS 82 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH-TTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH-hCCeEEEeCCCCCHHHHHHHHhCCCEEEE
Confidence 47899999999999999999999999999999986542 11 111110 13689999999999999999999999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC------CC--chHHHhHHHHHHHHHhhCCCeE
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS------SP--SRVFSTKAAAEEAVLRELPWAT 154 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~------~~--~~y~~~K~~~E~~~~~~~~~~~ 154 (327)
+++..... .|+.++.+++++|++.|++++||+ |+++.... .| ..| .+|..+|+++++.+++++
T Consensus 83 ~a~~~~~~-------~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~g~~~~ 153 (313)
T 1qyd_A 83 ALAGGVLS-------HHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEAASIPYT 153 (313)
T ss_dssp CCCCSSSS-------TTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHHTTCCBC
T ss_pred CCccccch-------hhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHHhcCCCeE
Confidence 99865321 256788999999999865889986 76664322 12 457 999999999999999999
Q ss_pred EEecCeeecCCChhHHHHHHH----HhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCC-ccccH
Q 047628 155 IMRPAAMIGTEDRLLNKWAQF----VKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTV 229 (327)
Q Consensus 155 i~r~~~~~G~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~-~~~s~ 229 (327)
++||+.++|+. ...+... ....+.+.++++++..+++++++|+|++++.+++++.. .++.|++.++ +.+|+
T Consensus 154 ilrp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~~~g~~~~~s~ 229 (313)
T 1qyd_A 154 YVSSNMFAGYF---AGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT-LNKTMYIRPPMNILSQ 229 (313)
T ss_dssp EEECCEEHHHH---TTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG-SSSEEECCCGGGEEEH
T ss_pred EEEeceecccc---ccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc-CCceEEEeCCCCccCH
Confidence 99999998631 1111111 12234566778888999999999999999999998765 5788888765 78999
Q ss_pred HHHHHHHHHHhhcCCccccCChHHH
Q 047628 230 HELAELMYDTIREYPHYVKVPFPVA 254 (327)
Q Consensus 230 ~el~~~i~~~~g~~~~~~~~~~~~~ 254 (327)
.|+++.+.+.+|++.++..+|....
T Consensus 230 ~e~~~~~~~~~g~~~~~~~~~~~~~ 254 (313)
T 1qyd_A 230 KEVIQIWERLSEQNLDKIYISSQDF 254 (313)
T ss_dssp HHHHHHHHHHHTCCCEECCBCSHHH
T ss_pred HHHHHHHHHhcCCCCceEECCHHHH
Confidence 9999999999999988888885444
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=250.95 Aligned_cols=238 Identities=16% Similarity=0.088 Sum_probs=184.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-hhhcccCCCCCeeEEeeC-CCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFN-PRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D-l~~~~~~~~~~~~~d~vi~ 82 (327)
|++|+|+||||||+||++|++.|+++|++|++++|++++.. ..+.. .++++++.+| ++|++++.++++++|+|||
T Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~---~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~ 79 (352)
T 1xgk_A 3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQA---IPNVTLFQGPLLNNVPLMDTLFEGAHLAFI 79 (352)
T ss_dssp CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHT---STTEEEEESCCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhh---cCCcEEEECCccCCHHHHHHHHhcCCEEEE
Confidence 33578999999999999999999999999999999877631 12221 1368899999 9999999999999999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC--CCC-CCCchHHHhHHHHHHHHHhhCCCeEEEecC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG--ASS-SSPSRVFSTKAAAEEAVLRELPWATIMRPA 159 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~--v~~-~~~~~y~~~K~~~E~~~~~~~~~~~i~r~~ 159 (327)
+++... ...|..+ .+++++|++.+++++|||+||.. .+. ..+..|+.+|..+|+++++.+++++++||+
T Consensus 80 ~a~~~~-------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~gi~~~ivrpg 151 (352)
T 1xgk_A 80 NTTSQA-------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAG 151 (352)
T ss_dssp CCCSTT-------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEEC
T ss_pred cCCCCC-------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHcCCCEEEEecc
Confidence 986431 1235555 99999999875478999999985 332 345789999999999999999999999987
Q ss_pred eeecCCChhH-HHHHH-HHhhcCce--eeecCCCceecceeH-HHHHHHHHHHhhcCC-CCCCceEEecCCccccHHHHH
Q 047628 160 AMIGTEDRLL-NKWAQ-FVKKFNFF--PLFGDGSTRIQPVYV-VDVAAAVTAALKDDG-TSMGKIYELGGPDIFTVHELA 233 (327)
Q Consensus 160 ~~~G~~~~~~-~~~~~-~~~~~~~~--~~~~~~~~~~~~i~~-~D~a~~~~~~l~~~~-~~~~~~~~v~~~~~~s~~el~ 233 (327)
+||++.... ..+.. .....+.+ .+++++++.++++|+ +|+|++++.+++++. ...+++||+++ +.+|+.|++
T Consensus 152 -~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g~~~~l~~-~~~s~~e~~ 229 (352)
T 1xgk_A 152 -IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVC 229 (352)
T ss_dssp -EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHH
T ss_pred -eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCCeEEEEec-CCCCHHHHH
Confidence 677743210 00000 01112222 446778889999999 899999999998752 11478999996 679999999
Q ss_pred HHHHHHhhcCCccccCChHHHH
Q 047628 234 ELMYDTIREYPHYVKVPFPVAK 255 (327)
Q Consensus 234 ~~i~~~~g~~~~~~~~~~~~~~ 255 (327)
+.+.+.+|.+.++.++|.+..+
T Consensus 230 ~~i~~~~G~~~~~~~vp~~~~~ 251 (352)
T 1xgk_A 230 AAFSRALNRRVTYVQVPKVEIK 251 (352)
T ss_dssp HHHHHHHTSCEEEEECSSCCCC
T ss_pred HHHHHHHCCCCceEECCHHHHH
Confidence 9999999998888888855443
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-32 Score=239.13 Aligned_cols=233 Identities=21% Similarity=0.228 Sum_probs=182.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc--hhh---hcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--PRH---LKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+|+|+||||||+||++++++|+++|++|++++|+.+.. ... +..+. ..+++++.+|++|++++.++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~~~d~vi 82 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKNVDVVI 82 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH-hCCCEEEEeccCCHHHHHHHHcCCCEEE
Confidence 47899999999999999999999999999999987542 111 11110 1368999999999999999999999999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-----CC--chHHHhHHHHHHHHHhhCCCeE
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-----SP--SRVFSTKAAAEEAVLRELPWAT 154 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-----~~--~~y~~~K~~~E~~~~~~~~~~~ 154 (327)
|+++... +.++.+++++|+++|++++||+ |+++...+ .| ..| .+|..+|+++++.+++++
T Consensus 83 ~~a~~~~-----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~~~~~ 149 (308)
T 1qyc_A 83 STVGSLQ-----------IESQVNIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEAEGIPYT 149 (308)
T ss_dssp ECCCGGG-----------SGGGHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCBE
T ss_pred ECCcchh-----------hhhHHHHHHHHHhcCCCceEee-cccccCccccccCCcchhHH-HHHHHHHHHHHhcCCCeE
Confidence 9998642 3456899999999865889985 77664322 22 457 999999999999999999
Q ss_pred EEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCC-ccccHHHHH
Q 047628 155 IMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTVHELA 233 (327)
Q Consensus 155 i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~-~~~s~~el~ 233 (327)
++||+.++|.....+..........+.+.++++++..+++++++|+|++++.+++++.. .+++|++.++ +.+|+.|++
T Consensus 150 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~~~g~~~~~s~~e~~ 228 (308)
T 1qyc_A 150 YVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT-LNKTLYLRLPANTLSLNELV 228 (308)
T ss_dssp EEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG-TTEEEECCCGGGEEEHHHHH
T ss_pred EEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccc-cCeEEEEeCCCCccCHHHHH
Confidence 99999998642111100000012344567788889999999999999999999988765 5788888764 689999999
Q ss_pred HHHHHHhhcCCccccCChHHH
Q 047628 234 ELMYDTIREYPHYVKVPFPVA 254 (327)
Q Consensus 234 ~~i~~~~g~~~~~~~~~~~~~ 254 (327)
+.+.+.+|++.++..+|....
T Consensus 229 ~~~~~~~g~~~~~~~~~~~~~ 249 (308)
T 1qyc_A 229 ALWEKKIDKTLEKAYVPEEEV 249 (308)
T ss_dssp HHHHHHTTSCCEEEEECHHHH
T ss_pred HHHHHHhCCCCceEeCCHHHH
Confidence 999999999998888885544
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-32 Score=231.62 Aligned_cols=223 Identities=17% Similarity=0.187 Sum_probs=175.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+++|+||||||||+||++++++|+++ |++|++++|++++.. .+ . .+++++.+|+++++++.++++++|+|||
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~-~~---~--~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 75 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-KI---G--GEADVFIGDITDADSINPAFQGIDALVI 75 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHH-HT---T--CCTTEEECCTTSHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchh-hc---C--CCeeEEEecCCCHHHHHHHHcCCCEEEE
Confidence 45689999999999999999999999 899999999854322 11 1 3578999999999999999999999999
Q ss_pred cccccccc----------Cc-------chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-CC------chHHHh
Q 047628 83 LIGREYET----------RN-------YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-SP------SRVFST 138 (327)
Q Consensus 83 ~a~~~~~~----------~~-------~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-~~------~~y~~~ 138 (327)
+|+..... .+ ...+++|+.++.++++++++.+ +++||++||.+++.. .| ..|+.+
T Consensus 76 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~y~~s 154 (253)
T 1xq6_A 76 LTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNILVW 154 (253)
T ss_dssp CCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGGGGGGCCHHHH
T ss_pred eccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCCCCccccccchhHHHH
Confidence 99864321 11 1356899999999999999998 899999999877532 22 246679
Q ss_pred HHHHHHHHHhhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCce
Q 047628 139 KAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218 (327)
Q Consensus 139 K~~~E~~~~~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 218 (327)
|..+|.+++..+++++++||+.++|+...... ........+++. ..++++++|+|++++.+++++.. .+++
T Consensus 155 K~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~Dva~~~~~~~~~~~~-~g~~ 225 (253)
T 1xq6_A 155 KRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE-----LLVGKDDELLQT---DTKTVPRADVAEVCIQALLFEEA-KNKA 225 (253)
T ss_dssp HHHHHHHHHTSSSCEEEEEECEEECSCSSSSC-----EEEESTTGGGGS---SCCEEEHHHHHHHHHHHTTCGGG-TTEE
T ss_pred HHHHHHHHHhCCCceEEEecceeecCCcchhh-----hhccCCcCCcCC---CCcEEcHHHHHHHHHHHHcCccc-cCCE
Confidence 99999999998999999999999998643210 000111111121 35689999999999999998765 6889
Q ss_pred EEecCCc---cccHHHHHHHHHHHhhcC
Q 047628 219 YELGGPD---IFTVHELAELMYDTIREY 243 (327)
Q Consensus 219 ~~v~~~~---~~s~~el~~~i~~~~g~~ 243 (327)
||+++++ .+|+.|+++.+++.+|++
T Consensus 226 ~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 226 FDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp EEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred EEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 9999864 599999999999988753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-32 Score=236.71 Aligned_cols=233 Identities=21% Similarity=0.186 Sum_probs=181.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC-c-h-h---hhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-D-P-R---HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~-~-~---~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
+|+|+||||||+||++++++|+++|++|++++|+++. . . . .+..+. ..+++++.+|++|++++.++++++|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~-~~~v~~v~~D~~d~~~l~~~~~~~d~v 80 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQ-SLGVILLEGDINDHETLVKAIKQVDIV 80 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHH-HTTCEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHH-hCCCEEEEeCCCCHHHHHHHHhCCCEE
Confidence 4789999999999999999999999999999998621 1 1 1 111110 135889999999999999999999999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-----CC--chHHHhHHHHHHHHHhhCCCe
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-----SP--SRVFSTKAAAEEAVLRELPWA 153 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-----~~--~~y~~~K~~~E~~~~~~~~~~ 153 (327)
||+++... +.++.+++++|++.|.+++||+ |+++...+ .| ..| .+|..+|+++++.++++
T Consensus 81 i~~a~~~~-----------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~~~i~~ 147 (307)
T 2gas_A 81 ICAAGRLL-----------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEAEGVPY 147 (307)
T ss_dssp EECSSSSC-----------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHHHTCCB
T ss_pred EECCcccc-----------cccHHHHHHHHHhcCCceEEee-cccccCcccccCCCcchhHH-HHHHHHHHHHHHcCCCe
Confidence 99998642 3567899999998854789984 66654321 23 467 99999999999999999
Q ss_pred EEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCC-ccccHHHH
Q 047628 154 TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP-DIFTVHEL 232 (327)
Q Consensus 154 ~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~-~~~s~~el 232 (327)
+++||+.++++....+..........+.+.++++++..+++++++|+|++++.++.++.. .++.|++.++ +.+|+.|+
T Consensus 148 ~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-~~~~~~~~~~~~~~s~~e~ 226 (307)
T 2gas_A 148 TYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT-LNKAVHIRLPKNYLTQNEV 226 (307)
T ss_dssp EEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG-TTEEEECCCGGGEEEHHHH
T ss_pred EEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc-cCceEEEeCCCCcCCHHHH
Confidence 999999998753221111000011234567778888999999999999999999988765 5788888764 68999999
Q ss_pred HHHHHHHhhcCCccccCChHHH
Q 047628 233 AELMYDTIREYPHYVKVPFPVA 254 (327)
Q Consensus 233 ~~~i~~~~g~~~~~~~~~~~~~ 254 (327)
++.+.+.+|++.++..+|....
T Consensus 227 ~~~~~~~~g~~~~~~~~~~~~~ 248 (307)
T 2gas_A 227 IALWEKKIGKTLEKTYVSEEQV 248 (307)
T ss_dssp HHHHHHHHTSCCEEEEECHHHH
T ss_pred HHHHHHHhCCCCceeecCHHHH
Confidence 9999999999998888886554
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-32 Score=224.16 Aligned_cols=202 Identities=15% Similarity=0.155 Sum_probs=166.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
++|+|+||||||+||++++++|+++|+ +|++++|++++. .++++++.+|+++++++.+++ +|+|||+
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---------~~~~~~~~~D~~~~~~~~~~~--~d~vi~~ 72 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------HPRLDNPVGPLAELLPQLDGS--IDTAFCC 72 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------CTTEECCBSCHHHHGGGCCSC--CSEEEEC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---------CCCceEEeccccCHHHHHHhh--hcEEEEC
Confidence 457999999999999999999999998 999999987651 136888999999998888877 9999999
Q ss_pred cccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCC-eEEEecCe
Q 047628 84 IGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPW-ATIMRPAA 160 (327)
Q Consensus 84 a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~-~~i~r~~~ 160 (327)
++.... ......+++|+.++.++++++++.+ +++||++||.+++...++.|+.+|..+|++++..+++ ++++||+.
T Consensus 73 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~~y~~sK~~~e~~~~~~~~~~~~~vrp~~ 151 (215)
T 2a35_A 73 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSL 151 (215)
T ss_dssp CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCS
T ss_pred eeeccccCCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCCCccHHHHHHHHHHHHHHHcCCCeEEEEeCce
Confidence 997543 3445788999999999999999998 8999999999999877799999999999999999999 99999999
Q ss_pred eecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccHH
Q 047628 161 MIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230 (327)
Q Consensus 161 ~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~ 230 (327)
+||+... ++.. +. ....++ ++ ..+++++++|+|++++.+++++. +++||+++++.+++.
T Consensus 152 v~g~~~~~~~~~~----~~-~~~~~~-~~--~~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 152 LFGPREEFRLAEI----LA-APIARI-LP--GKYHGIEACDLARALWRLALEEG---KGVRFVESDELRKLG 212 (215)
T ss_dssp EESTTSCEEGGGG----TT-CCCC-------CHHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHHHHHHHH
T ss_pred eeCCCCcchHHHH----HH-Hhhhhc-cC--CCcCcEeHHHHHHHHHHHHhcCC---CCceEEcHHHHHHhh
Confidence 9998653 2221 11 122222 22 26799999999999999998764 579999997766553
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-30 Score=211.84 Aligned_cols=196 Identities=16% Similarity=0.092 Sum_probs=158.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|+|+||||||+||++++++|+++|++|++++|++++..... ..+++++.+|+++++++.++++++|+|||+++.
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~ 77 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----PRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGT 77 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----CCCSEEEESCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-----CCceEEEEecCCCHHHHHHHHcCCCEEEECccC
Confidence 479999999999999999999999999999999865432110 146899999999999999999999999999987
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC------chHHHhHHHHHHHHHhhCCCeEEEecCe
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP------SRVFSTKAAAEEAVLRELPWATIMRPAA 160 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~------~~y~~~K~~~E~~~~~~~~~~~i~r~~~ 160 (327)
.... ...++|+.++.++++++++.+ +++||++||.+++...+ ..|+.+|..+|++++..+++++++||+.
T Consensus 78 ~~~~---~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~i~~~~lrp~~ 153 (206)
T 1hdo_A 78 RNDL---SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPH 153 (206)
T ss_dssp TTCC---SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECCSE
T ss_pred CCCC---CccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHhCCCCEEEEeCCc
Confidence 5432 233578999999999999998 89999999998876542 6799999999999999999999999999
Q ss_pred eecCCChhHHHHHHHHhhcCceeeecCCCce-ecceeHHHHHHHHHHHhhcCCCCCCceEEecCCc
Q 047628 161 MIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR-IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPD 225 (327)
Q Consensus 161 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~ 225 (327)
+ +++... .......+. .. .++++++|+|++++.+++++.. .|++|++++++
T Consensus 154 ~-~~~~~~----------~~~~~~~~~--~~~~~~i~~~Dva~~~~~~~~~~~~-~g~~~~i~~g~ 205 (206)
T 1hdo_A 154 I-GDQPLT----------GAYTVTLDG--RGPSRVISKHDLGHFMLRCLTTDEY-DGHSTYPSHQY 205 (206)
T ss_dssp E-ECCCCC----------SCCEEESSS--CSSCSEEEHHHHHHHHHHTTSCSTT-TTCEEEEECCC
T ss_pred c-cCCCCC----------cceEecccC--CCCCCccCHHHHHHHHHHHhcCccc-cccceeeeccc
Confidence 7 332210 000111111 11 5899999999999999998775 78999999874
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-31 Score=227.51 Aligned_cols=207 Identities=13% Similarity=-0.017 Sum_probs=172.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
||+||||||||+||++++++|+++|++|++++|++..... .+++++.+|+++++++.++++++|+|||+|+.
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~ 73 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE--------AHEEIVACDLADAQAVHDLVKDCDGIIHLGGV 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC--------TTEEECCCCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC--------CCccEEEccCCCHHHHHHHHcCCCEEEECCcC
Confidence 4689999999999999999999999999999998764211 25788999999999999999999999999997
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------CchHHHhHHHHHHHHHh----
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------PSRVFSTKAAAEEAVLR---- 148 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~~~y~~~K~~~E~~~~~---- 148 (327)
.........+++|+.++.++++++++.+ +++||++||..++... .+.|+.+|..+|.+++.
T Consensus 74 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~ 152 (267)
T 3ay3_A 74 SVERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK 152 (267)
T ss_dssp CSCCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 6444445678899999999999999988 8999999998775432 17899999999999875
Q ss_pred hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcccc
Q 047628 149 ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 149 ~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s 228 (327)
.+++++++||+.+|+... +++...++++++|+|++++.+++++.. .+++|++.+++..+
T Consensus 153 ~gi~~~~lrp~~v~~~~~--------------------~~~~~~~~~~~~dva~~~~~~~~~~~~-~~~~~~~~~~~~~~ 211 (267)
T 3ay3_A 153 FDIETLNIRIGSCFPKPK--------------------DARMMATWLSVDDFMRLMKRAFVAPKL-GCTVVYGASANTES 211 (267)
T ss_dssp TCCCEEEEEECBCSSSCC--------------------SHHHHHHBCCHHHHHHHHHHHHHSSCC-CEEEEEECCSCSSC
T ss_pred cCCCEEEEeceeecCCCC--------------------CCCeeeccccHHHHHHHHHHHHhCCCC-CceeEecCCCcccc
Confidence 369999999999984311 223457899999999999999998765 45789998888888
Q ss_pred HHHHHHHHHHHhhcCCc
Q 047628 229 VHELAELMYDTIREYPH 245 (327)
Q Consensus 229 ~~el~~~i~~~~g~~~~ 245 (327)
+.|+.+. +.+|.+..
T Consensus 212 ~~d~~~~--~~lg~~p~ 226 (267)
T 3ay3_A 212 WWDNDKS--AFLGWVPQ 226 (267)
T ss_dssp CBCCGGG--GGGCCCCC
T ss_pred ccCHHHH--HHcCCCCC
Confidence 8888776 77786654
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-31 Score=219.93 Aligned_cols=202 Identities=14% Similarity=0.165 Sum_probs=146.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+||||||||+||++++++|+++|++|++++|++++... +. ++++++.+|++|+++ +++.++|+|||+++..
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~-----~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ-TH-----KDINILQKDIFDLTL--SDLSDQNVVVDAYGIS 72 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH-HC-----SSSEEEECCGGGCCH--HHHTTCSEEEECCCSS
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh-cc-----CCCeEEeccccChhh--hhhcCCCEEEECCcCC
Confidence 689999999999999999999999999999998755322 11 368999999999887 7889999999999974
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------CchHHHhHHHHHHH--HH--hh
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------PSRVFSTKAAAEEA--VL--RE 149 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~~~y~~~K~~~E~~--~~--~~ 149 (327)
.. ....|+.++.++++++++.+ ++++|++||.++.... .+.|+.+|...|.+ ++ ..
T Consensus 73 ~~-----~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~ 146 (221)
T 3ew7_A 73 PD-----EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQA 146 (221)
T ss_dssp TT-----TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-------------------CCCSCCHHHHHHHHHHHHTTTT
T ss_pred cc-----ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 32 34668999999999999998 8999999997653111 15688999999886 66 56
Q ss_pred CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccccH
Q 047628 150 LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTV 229 (327)
Q Consensus 150 ~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~ 229 (327)
+++++++||+.+||++.. ...+. .....+...+++ .++++++|+|++++.+++++.. .+++||++++.+.+.
T Consensus 147 gi~~~ivrp~~v~g~~~~-~~~~~---~~~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~~-~g~~~~~~~~~~~~~ 218 (221)
T 3ew7_A 147 EFSWTYISPSAMFEPGER-TGDYQ---IGKDHLLFGSDG---NSFISMEDYAIAVLDEIERPNH-LNEHFTVAGKLEHHH 218 (221)
T ss_dssp TSCEEEEECSSCCCCC----------------------------CCCHHHHHHHHHHHHHSCSC-TTSEEECCC------
T ss_pred CccEEEEeCcceecCCCc-cCceE---eccccceecCCC---CceEeHHHHHHHHHHHHhCccc-cCCEEEECCCCcccc
Confidence 799999999999998432 11111 112334443333 3689999999999999999987 899999999888776
Q ss_pred HH
Q 047628 230 HE 231 (327)
Q Consensus 230 ~e 231 (327)
+|
T Consensus 219 ~~ 220 (221)
T 3ew7_A 219 HH 220 (221)
T ss_dssp --
T ss_pred cc
Confidence 54
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-30 Score=219.20 Aligned_cols=205 Identities=15% Similarity=0.006 Sum_probs=170.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
++|+||||||||+||+++++.|+++|++|++++|++.+.. ..+++++.+|++|++++.++++++|+|||+||
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag 73 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVAGCDGIVHLGG 73 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCC
Confidence 4578999999999999999999999999999999876543 14689999999999999999999999999999
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----------CC----chHHHhHHHHHHHHHh---
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS----------SP----SRVFSTKAAAEEAVLR--- 148 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~----------~~----~~y~~~K~~~E~~~~~--- 148 (327)
..........+++|+.++.++++++++.+ +++||++||..++.. .+ +.|+.+|..+|.+++.
T Consensus 74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~ 152 (267)
T 3rft_A 74 ISVEKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFD 152 (267)
T ss_dssp CCSCCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHH
Confidence 86555556788999999999999999998 899999999876521 11 7899999999998864
Q ss_pred -hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCccc
Q 047628 149 -ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 149 -~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~ 227 (327)
.+++++++||+.++|+ ++++....++++++|+++++..+++.+.. .+.++++.++++.
T Consensus 153 ~~g~~~~~vr~~~v~~~--------------------~~~~~~~~~~~~~~d~a~~~~~~~~~~~~-~~~~~~~~s~~~~ 211 (267)
T 3rft_A 153 KFGQETALVRIGSCTPE--------------------PNNYRMLSTWFSHDDFVSLIEAVFRAPVL-GCPVVWGASANDA 211 (267)
T ss_dssp HHCCCEEEEEECBCSSS--------------------CCSTTHHHHBCCHHHHHHHHHHHHHCSCC-CSCEEEECCCCTT
T ss_pred HhCCeEEEEEeecccCC--------------------CCCCCceeeEEcHHHHHHHHHHHHhCCCC-CceEEEEeCCCCC
Confidence 4699999999999975 23455667899999999999999998876 5568888887777
Q ss_pred cHHHHHHHHHHHhhc
Q 047628 228 TVHELAELMYDTIRE 242 (327)
Q Consensus 228 s~~el~~~i~~~~g~ 242 (327)
++.++... +.+|.
T Consensus 212 ~~~~~~~~--~~~g~ 224 (267)
T 3rft_A 212 GWWDNSHL--GFLGW 224 (267)
T ss_dssp CCBCCGGG--GGGCC
T ss_pred CcccChhH--HHCCC
Confidence 77665332 44554
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-29 Score=212.58 Aligned_cols=207 Identities=16% Similarity=0.093 Sum_probs=164.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|++|+|+||||||+||++++++|+++|+ +|++++|++++...... .++.++.+|+++++++.++++++|+|||
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~d~vi~ 90 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-----KNVNQEVVDFEKLDDYASAFQGHDVGFC 90 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-----GGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccccc-----CCceEEecCcCCHHHHHHHhcCCCEEEE
Confidence 4457999999999999999999999999 99999998765432111 2588899999999999999999999999
Q ss_pred ccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCC-eEEEecCe
Q 047628 83 LIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPW-ATIMRPAA 160 (327)
Q Consensus 83 ~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~-~~i~r~~~ 160 (327)
|||.... ......+++|+.++.++++++++.+ +++||++||.+++......|+.+|.++|.+++..+.+ ++++||+.
T Consensus 91 ~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~vrpg~ 169 (242)
T 2bka_A 91 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGV 169 (242)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCE
T ss_pred CCCcccccCCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCCCcchHHHHHHHHHHHHHhcCCCCeEEEcCce
Confidence 9997532 2234678899999999999999998 8999999999998777789999999999999999995 99999999
Q ss_pred eecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCC
Q 047628 161 MIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGP 224 (327)
Q Consensus 161 ~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~ 224 (327)
++|+... ....+....... .+.. .....+++++|+|++++.+++++.. ++.|++.++
T Consensus 170 v~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~~~~~dva~~~~~~~~~~~~--~~~~~~~~~ 228 (242)
T 2bka_A 170 LLCDRQESRPGEWLVRKFFGS--LPDS---WASGHSVPVVTVVRAMLNNVVRPRD--KQMELLENK 228 (242)
T ss_dssp EECTTGGGSHHHHHHHHHHCS--CCTT---GGGGTEEEHHHHHHHHHHHHTSCCC--SSEEEEEHH
T ss_pred ecCCCCCCcHHHHHHHHhhcc--cCcc---ccCCcccCHHHHHHHHHHHHhCccc--cCeeEeeHH
Confidence 9998643 222222222211 1110 1123589999999999999998765 456766553
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=215.41 Aligned_cols=203 Identities=12% Similarity=0.118 Sum_probs=154.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|+||||||||+||++++++|+++|++|++++|++++...... .+++++.+|++|+++ +++.++|+|||+|+..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLG-----ATVATLVKEPLVLTE--ADLDSVDAVVDALSVP 73 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTC-----TTSEEEECCGGGCCH--HHHTTCSEEEECCCCC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccC-----CCceEEecccccccH--hhcccCCEEEECCccC
Confidence 579999999999999999999999999999998655322111 368999999999887 7889999999999986
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC---CC-------------CchHHHhHHHHHHHH---Hh
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS---SS-------------PSRVFSTKAAAEEAV---LR 148 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~---~~-------------~~~y~~~K~~~E~~~---~~ 148 (327)
... .....|+.++.+++++|++.+ ++||++||.++.. .. .+.|+.+|...|.+. +.
T Consensus 74 ~~~---~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~~~~ 148 (224)
T 3h2s_A 74 WGS---GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMN 148 (224)
T ss_dssp TTS---SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHHHHHTTC
T ss_pred CCc---chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHHHHHHhc
Confidence 321 235779999999999999997 7999999875421 10 367999999999652 23
Q ss_pred hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcccc
Q 047628 149 ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 149 ~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s 228 (327)
.+++++++||+.+||++...- + ......++. +....++++++|+|++++.+++++.. .+++|++++.++.+
T Consensus 149 ~~i~~~ivrp~~v~g~~~~~~--~---~~~~~~~~~---~~~~~~~i~~~DvA~~~~~~l~~~~~-~g~~~~~~~~~~~~ 219 (224)
T 3h2s_A 149 ANVNWIGISPSEAFPSGPATS--Y---VAGKDTLLV---GEDGQSHITTGNMALAILDQLEHPTA-IRDRIVVRDADLEH 219 (224)
T ss_dssp TTSCEEEEEECSBCCCCCCCC--E---EEESSBCCC---CTTSCCBCCHHHHHHHHHHHHHSCCC-TTSEEEEEECC---
T ss_pred CCCcEEEEcCccccCCCcccC--c---eeccccccc---CCCCCceEeHHHHHHHHHHHhcCccc-cCCEEEEecCcchh
Confidence 469999999999999843211 0 111122222 33457899999999999999999887 89999999977766
Q ss_pred HHH
Q 047628 229 VHE 231 (327)
Q Consensus 229 ~~e 231 (327)
..|
T Consensus 220 ~~~ 222 (224)
T 3h2s_A 220 HHH 222 (224)
T ss_dssp ---
T ss_pred ccc
Confidence 543
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-27 Score=197.86 Aligned_cols=193 Identities=16% Similarity=0.121 Sum_probs=153.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHH-hCCCEEEEeeCCCC-CchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLA-KMGSQVLVPFRGCE-DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll-~~g~~V~~~~R~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+||++|+||||||+||++++++|+ +.|++|++++|+++ +... +... ..+++++.+|++|++++.++++++|+|||
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~-~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP-EIID--HERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH-HHHT--STTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh-hccC--CCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 344569999999999999999999 89999999999865 4322 1101 14689999999999999999999999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCc------------hHHHhHHHHHHHHHhhC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPS------------RVFSTKAAAEEAVLREL 150 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~------------~y~~~K~~~E~~~~~~~ 150 (327)
++|.. |+. ++++++++++.+ +++||++||.+++...|. .|+.+|..+|++++..+
T Consensus 80 ~ag~~-----------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~~~ 146 (221)
T 3r6d_A 80 GAMES-----------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESN 146 (221)
T ss_dssp SCCCC-----------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHHSC
T ss_pred cCCCC-----------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHhCC
Confidence 99853 344 899999999998 899999999998876551 89999999999999999
Q ss_pred CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCC-ceecceeHHHHHHHHHHHh--hcCCCCCCceEEecCCc
Q 047628 151 PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAAL--KDDGTSMGKIYELGGPD 225 (327)
Q Consensus 151 ~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~l--~~~~~~~~~~~~v~~~~ 225 (327)
++++++||+.++++... ..+....... ....+++.+|+|++++.++ .++..+.++.+.+.++.
T Consensus 147 i~~~~vrpg~v~~~~~~------------~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~~~~ 212 (221)
T 3r6d_A 147 LNYTILRLTWLYNDPEX------------TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVGEPG 212 (221)
T ss_dssp SEEEEEEECEEECCTTC------------CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEECTT
T ss_pred CCEEEEechhhcCCCCC------------cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeecCCC
Confidence 99999999999986210 1111111111 1224899999999999999 77664467888888764
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.2e-27 Score=198.50 Aligned_cols=193 Identities=18% Similarity=0.142 Sum_probs=149.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|+||+||||||||+||++++++|+++| ++|++++|++++...... .+++++.+|++|++++.++++++|+|||+
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~-----~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~ 95 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-----TNSQIIMGDVLNHAALKQAMQGQDIVYAN 95 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCC-----TTEEEEECCTTCHHHHHHHHTTCSEEEEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccccc-----CCcEEEEecCCCHHHHHHHhcCCCEEEEc
Confidence 556899999999999999999999999 899999998765332211 36899999999999999999999999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCc-----------hHHHhHHHHHHHHHhhCCC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPS-----------RVFSTKAAAEEAVLRELPW 152 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~-----------~y~~~K~~~E~~~~~~~~~ 152 (327)
++... ....+.++++++++.+ +++||++||.+++...+. .+...+..+|+.++..+++
T Consensus 96 a~~~~----------~~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~ 164 (236)
T 3qvo_A 96 LTGED----------LDIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLE 164 (236)
T ss_dssp CCSTT----------HHHHHHHHHHHHHHTT-CCEEEEECCCCC----------------CGGGHHHHHHHHHHHTSCSE
T ss_pred CCCCc----------hhHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcccchHHHHHHHHHHHHHCCCC
Confidence 97521 1245779999999998 899999999988754432 3345677888999988999
Q ss_pred eEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCC-ceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcc
Q 047628 153 ATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGS-TRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI 226 (327)
Q Consensus 153 ~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~ 226 (327)
++++||+.++++.... +.....+. ....+++.+|+|++++.++.++..+.++.|+++++++
T Consensus 165 ~~~vrPg~i~~~~~~~-------------~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~~ 226 (236)
T 3qvo_A 165 YTILRPAWLTDEDIID-------------YELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGT 226 (236)
T ss_dssp EEEEEECEEECCSCCC-------------CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSSC
T ss_pred EEEEeCCcccCCCCcc-------------eEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCCC
Confidence 9999999999764211 11111111 1236799999999999999988743789999999764
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=198.58 Aligned_cols=228 Identities=13% Similarity=0.080 Sum_probs=170.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+.............++.++.+|++|++++.++++ ++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999999764432222222222368999999999999988876 68
Q ss_pred cEEEEcccccccc----------CcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC---chHHHhHH
Q 047628 78 NVVINLIGREYET----------RNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP---SRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~---~~y~~~K~ 140 (327)
|+|||+||..... .....+++|+.++.++++++... + ..+||++||..++...+ ..|+.+|.
T Consensus 94 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~sK~ 172 (278)
T 2bgk_A 94 DIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKH 172 (278)
T ss_dssp CEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHHH
T ss_pred CEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCCCCCcchHHHHH
Confidence 9999999975321 11347789999999999988663 4 57999999987765433 67999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChh----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRL----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+.|.+.+.. +++++++|||.++++.... ...+........ +.....+++++|+|++++.++.
T Consensus 173 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~dva~~~~~l~~ 245 (278)
T 2bgk_A 173 AVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA-------ANLKGTLLRAEDVADAVAYLAG 245 (278)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT-------CSSCSCCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc-------cccccccCCHHHHHHHHHHHcC
Confidence 999988653 5899999999999884321 112222221111 1112357899999999999997
Q ss_pred cCCC-CCCceEEecCCccccHHHHHHHHHHHh
Q 047628 210 DDGT-SMGKIYELGGPDIFTVHELAELMYDTI 240 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~~~s~~el~~~i~~~~ 240 (327)
.+.. ..|+.|++.++..+++.|+++.+.+.+
T Consensus 246 ~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 246 DESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp GGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred cccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 5432 258999999999999999999876543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.5e-26 Score=197.17 Aligned_cols=230 Identities=20% Similarity=0.163 Sum_probs=166.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++++|||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|+++++++.++++ +
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP--DRAEAISLDVTDGERIDVVAADVLARYGR 79 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 3456899999999999999999999999999999998766544333332 468999999999999888776 6
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHH----HHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFM----AERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~----~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||+||...... ....+++|+.+ ++.+++.+++.+ ..++|++||.......+ ..|+.+|.++
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 158 (281)
T 3m1a_A 80 VDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSFAGFSAYSATKAAL 158 (281)
T ss_dssp CSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCCCCchHHHHHHHHH
Confidence 799999999753311 13467899999 555555667776 68999999987654433 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCC--------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTED--------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|.+.+.+ ++++.+++||.+.++.. .....+.........+. .......+.+++|+|++++.+
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~dva~a~~~~ 235 (281)
T 3m1a_A 159 EQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV---QGSDGSQPGDPAKAAAAIRLA 235 (281)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH---HC-----CBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH---hhccCCCCCCHHHHHHHHHHH
Confidence 9887653 58999999999876521 11111111111111111 112234678899999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g 241 (327)
++++.. +..|+++++....+.+....+.+.++
T Consensus 236 ~~~~~~--~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 236 LDTEKT--PLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHSSSC--CSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCC--CeEEecCchHHHHHHHHHHHHHHHHH
Confidence 998875 67999999777777887777777665
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-26 Score=196.79 Aligned_cols=206 Identities=14% Similarity=0.045 Sum_probs=156.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc----cccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----KANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----~~d~vi~~ 83 (327)
++||||||||+||++++++|+++|++|++++|++++... .+.+|+++++++.++++ ++|+|||+
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~ 69 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRCGGVLDGLVCC 69 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHcCCCccEEEEC
Confidence 589999999999999999999999999999998765321 15789999999988886 79999999
Q ss_pred ccccc-ccCcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCC--------------------------C
Q 047628 84 IGREY-ETRNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSS--------------------------P 132 (327)
Q Consensus 84 a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~--------------------------~ 132 (327)
||... .......+++|+.++.++++++... + ..++|++||..++... +
T Consensus 70 Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (255)
T 2dkn_A 70 AGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQ 148 (255)
T ss_dssp CCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccchhhhhhhccccCC
Confidence 99865 3444678899999999999987654 4 5799999998776432 2
Q ss_pred --chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHH
Q 047628 133 --SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 133 --~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
..|+.+|.++|.+++.. +++++++||+.++|+... .+.............. + ....+++++|+|++
T Consensus 149 ~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~---~~~~~~~~~~~~~~~~-~-~~~~~~~~~dva~~ 223 (255)
T 2dkn_A 149 THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ---ASKADPRYGESTRRFV-A-PLGRGSEPREVAEA 223 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH---HHHHCTTTHHHHHSCC-C-TTSSCBCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh---hcccchhhHHHHHHHH-H-HhcCCCCHHHHHHH
Confidence 57999999999988653 699999999999975321 1111000000011111 1 33478999999999
Q ss_pred HHHHhhcCCC-CCCceEEecCCccccHHH
Q 047628 204 VTAALKDDGT-SMGKIYELGGPDIFTVHE 231 (327)
Q Consensus 204 ~~~~l~~~~~-~~~~~~~v~~~~~~s~~e 231 (327)
++.++..+.. ..|+.|+++++..++++|
T Consensus 224 ~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 224 IAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred HHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 9999987621 168899999988777654
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-24 Score=183.72 Aligned_cols=215 Identities=18% Similarity=0.115 Sum_probs=158.0
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---c
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---A 77 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~ 77 (327)
|...++.|+++||||+|+||++++++|+++|++|++++|+.+......... .+++++.+|+++++++.+++++ +
T Consensus 1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---PGIEPVCVDLGDWDATEKALGGIGPV 77 (244)
T ss_dssp --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCCCcEEecCCCHHHHHHHHHHcCCC
Confidence 455677789999999999999999999999999999999865432222211 2467789999999999998864 7
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... .....+++|+.++.++++++... +...+||++||..++...+ ..|+.+|.+.|
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 157 (244)
T 1cyd_A 78 DLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMT 157 (244)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHH
Confidence 9999999964321 11347788999999998887653 2136899999987765444 68999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.+ ++++.++||+.++++.... ...+...+.... ...++++++|+|++++.++..+..
T Consensus 158 ~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~ 228 (244)
T 1cyd_A 158 MLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERH---------PLRKFAEVEDVVNSILFLLSDRSA 228 (244)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcC---------CccCCCCHHHHHHHHHHHhCchhh
Confidence 988653 5889999999998763221 122222222211 125789999999999999976532
Q ss_pred -CCCceEEecCCccc
Q 047628 214 -SMGKIYELGGPDIF 227 (327)
Q Consensus 214 -~~~~~~~v~~~~~~ 227 (327)
..|+.+++.++...
T Consensus 229 ~~~G~~~~v~gG~~~ 243 (244)
T 1cyd_A 229 STSGGGILVDAGYLA 243 (244)
T ss_dssp TCCSSEEEESTTGGG
T ss_pred cccCCEEEECCCccC
Confidence 25889999987543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.93 E-value=4.1e-25 Score=188.18 Aligned_cols=223 Identities=13% Similarity=0.080 Sum_probs=161.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.+..+++|||||+|+||++++++|+++|++|++++|+.+.........+ .++.++++|+++++++.++++ +
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 82 (259)
T 4e6p_A 5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG--PAAYAVQMDVTRQDSIDAAIAATVEHAGG 82 (259)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHSSS
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CCceEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 3456899999999999999999999999999999998765443333333 368899999999999888776 6
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||+||...... ....+++|+.++.++++++... +.-.++|++||.......+ ..|+.+|.+.
T Consensus 83 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~ 162 (259)
T 4e6p_A 83 LDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAV 162 (259)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHH
Confidence 899999999743211 1346679999999999987543 1124899999987654444 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh---cCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK---FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
|.+.+.. ++++.+++||.+.++.......+...... .+.....++......+.+++|+|++++.++....
T Consensus 163 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~ 242 (259)
T 4e6p_A 163 ISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAES 242 (259)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGG
T ss_pred HHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 9888754 48999999999998754332222221111 1111111222334567899999999999887543
Q ss_pred C-CCCceEEecCCcccc
Q 047628 213 T-SMGKIYELGGPDIFT 228 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~s 228 (327)
. ..|++|++.++..+|
T Consensus 243 ~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 243 DYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp TTCCSCEEEESTTSSCC
T ss_pred CCCCCCEEEECcChhcC
Confidence 2 258999999987654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=184.50 Aligned_cols=215 Identities=16% Similarity=0.167 Sum_probs=158.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+..++||||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++ +
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 456899999999999999999999999999999998654322211110 11468889999999999988876 7
Q ss_pred ccEEEEcccccccc-------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 77 ANVVINLIGREYET-------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
+|+|||+||..... .....+++|+.++.++++++. +.+ ..+||++||...+...+ ..|+.+|.+.|
T Consensus 89 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 167 (255)
T 1fmc_A 89 VDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAAS 167 (255)
T ss_dssp CCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCCcccHHHHHHHH
Confidence 89999999975321 113567899999999988874 445 67999999987765433 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.+.. ++++.++|||.++++... ..+.+........ + ...+.+++|+|++++.++..+..
T Consensus 168 ~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~dva~~~~~l~~~~~~~ 238 (255)
T 1fmc_A 168 HLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHT--P-------IRRLGQPQDIANAALFLCSPAASW 238 (255)
T ss_dssp HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTC--S-------SCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcC--C-------cccCCCHHHHHHHHHHHhCCcccc
Confidence 887654 588999999999875211 1122222222221 1 13467899999999999976432
Q ss_pred CCCceEEecCCccccH
Q 047628 214 SMGKIYELGGPDIFTV 229 (327)
Q Consensus 214 ~~~~~~~v~~~~~~s~ 229 (327)
..|++|+++++..+|+
T Consensus 239 ~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 239 VSGQILTVSGGGVQEL 254 (255)
T ss_dssp CCSCEEEESTTSCCCC
T ss_pred CCCcEEEECCceeccC
Confidence 2588999999887764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.3e-24 Score=184.52 Aligned_cols=225 Identities=13% Similarity=0.127 Sum_probs=153.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc---C-CCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM---G-DLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~-~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+++++++||||+|+||++++++|+++|++|++++|+.++........ . ...++.++.+|+++++++.++++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 83 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999865432221111 1 11358889999999999988876
Q ss_pred --cccEEEEcccccccc---------C---cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCC-CCCCC--ch
Q 047628 76 --KANVVINLIGREYET---------R---NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGA-SSSSP--SR 134 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~---------~---~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v-~~~~~--~~ 134 (327)
++|+|||+||..... + ....+++|+.++.++++++... + .++|++||... ....+ ..
T Consensus 84 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~~ 161 (278)
T 1spx_A 84 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPY 161 (278)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSHH
T ss_pred cCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCCCCccH
Confidence 789999999874321 1 1346788999999998887653 3 59999999876 54333 67
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH----HHH------HHHHhhcCceeeecCCCceecceeH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL----NKW------AQFVKKFNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~~~~i~~ 197 (327)
|+.+|.+.+.+.+.. ++++++++||.+.++..... ... ....... .+ ...+.+.
T Consensus 162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~~~~~~ 232 (278)
T 1spx_A 162 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC--VP-------AGVMGQP 232 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH--CT-------TSSCBCH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhc--CC-------CcCCCCH
Confidence 999999999887653 59999999999987642110 000 1111110 11 1247889
Q ss_pred HHHHHHHHHHhhcCCC--CCCceEEecCCccccHHHHHHHHHHHh
Q 047628 198 VDVAAAVTAALKDDGT--SMGKIYELGGPDIFTVHELAELMYDTI 240 (327)
Q Consensus 198 ~D~a~~~~~~l~~~~~--~~~~~~~v~~~~~~s~~el~~~i~~~~ 240 (327)
+|+|++++.++..+.. ..|++|++.++..+++.|+++.+.+.+
T Consensus 233 ~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 233 QDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred HHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 9999999999876431 158999999999999999999988764
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=187.19 Aligned_cols=235 Identities=16% Similarity=0.133 Sum_probs=169.5
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCC-CCCeeEEeeCCCChhHHHHHhc-
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGD-LGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~-~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
|.+.++++++|||||+|+||++++++|+++|++|++++|+.+....... ..+. ..++.++.+|++|++++.++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (281)
T 3svt_A 5 MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA 84 (281)
T ss_dssp ---CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred CccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence 3445567899999999999999999999999999999998765433222 2221 1268899999999998887775
Q ss_pred ------cccEEEEcccccccc------C---cchhHhhhhHHHHHHHHHHHHcC---CcceEEEEeccCCCCCCC--chH
Q 047628 76 ------KANVVINLIGREYET------R---NYSFEDVNHFMAERIAGIAKEHG---GIMRFIQISCLGASSSSP--SRV 135 (327)
Q Consensus 76 ------~~d~vi~~a~~~~~~------~---~~~~~~~n~~~~~~l~~a~~~~~---~v~~~v~~Ss~~v~~~~~--~~y 135 (327)
++|++||+||..... + -...+++|+.++.++++++...- +-.+||++||.......+ ..|
T Consensus 85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y 164 (281)
T 3svt_A 85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAY 164 (281)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHH
T ss_pred HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhH
Confidence 469999999972211 1 13477899999999999876532 034899999976643333 789
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
+.+|.+.+.+.+.+ ++++.+++||.+.++..... .......... .+ ...+.+++|+|++++
T Consensus 165 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~~~dva~~~~ 235 (281)
T 3svt_A 165 GVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMC--TP-------LPRQGEVEDVANMAM 235 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHH--CS-------SSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhc--CC-------CCCCCCHHHHHHHHH
Confidence 99999999988754 38999999999986532211 1111111111 11 124567899999999
Q ss_pred HHhhcCCC-CCCceEEecCCcccc-HHHHHHHHHHHhhcCC
Q 047628 206 AALKDDGT-SMGKIYELGGPDIFT-VHELAELMYDTIREYP 244 (327)
Q Consensus 206 ~~l~~~~~-~~~~~~~v~~~~~~s-~~el~~~i~~~~g~~~ 244 (327)
.++..... ..|++|++.++..++ ..|+.+.+.+.+|.+.
T Consensus 236 ~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 236 FLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred HHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 99876432 268999999988877 7888999999888653
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=4.6e-24 Score=182.14 Aligned_cols=219 Identities=16% Similarity=0.099 Sum_probs=159.0
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|.+.++++++|||||+|+||++++++|+++|++|++++|+.++.......... ..++.++.+|+++++++.++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (263)
T 3ai3_A 1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVR 80 (263)
T ss_dssp CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 66667778999999999999999999999999999999986543222111100 1368899999999999888776
Q ss_pred ----cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ----KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|+|||+||..... . ....+++|+.++.++++++. +.+ ..++|++||...+...+ ..|+.
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~ 159 (263)
T 3ai3_A 81 SSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLWYEPIYNV 159 (263)
T ss_dssp HHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCcchHHH
Confidence 689999999975321 1 13467889999888888764 445 67999999987765443 68999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH-H-----------HHHHHHhhcCceeeecCCCceecceeHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-N-----------KWAQFVKKFNFFPLFGDGSTRIQPVYVV 198 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~-----------~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 198 (327)
+|.+.+.+.+.. ++++.+++||.++++..... . .+....... .. ....+.+++
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------p~~~~~~~~ 231 (263)
T 3ai3_A 160 TKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE-HA-------PIKRFASPE 231 (263)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH-HC-------TTCSCBCHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc-CC-------CCCCCcCHH
Confidence 999999887653 58999999999987532111 1 011111100 01 113578999
Q ss_pred HHHHHHHHHhhcCCC-CCCceEEecCCcccc
Q 047628 199 DVAAAVTAALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 199 D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
|+|++++.++..+.. ..|++|++.++..+|
T Consensus 232 dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 232 ELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp HHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 999999999976542 258899999987654
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-23 Score=177.58 Aligned_cols=215 Identities=17% Similarity=0.088 Sum_probs=157.6
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---cc
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---KA 77 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~ 77 (327)
|.+.++.++++||||+|+||++++++|+++|++|++++|+.++........ ++++++.+|+++++++.++++ ++
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---PGIEPVCVDLGDWEATERALGSVGPV 77 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence 566677789999999999999999999999999999999865432222221 246778999999999999886 47
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... .....+++|+.++.++++++... +...++|++||.......+ ..|+.+|.++|
T Consensus 78 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~ 157 (244)
T 3d3w_A 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALD 157 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHH
Confidence 9999999974321 11357789999999888887653 2136899999987764433 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG- 212 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~- 212 (327)
.+.+.+ ++++.+++|+.++++..... .......... .....+++++|+|++++.++....
T Consensus 158 ~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~ 228 (244)
T 3d3w_A 158 MLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNR---------IPLGKFAEVEHVVNAILFLLSDRSG 228 (244)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhh---------CCCCCCcCHHHHHHHHHHHcCcccc
Confidence 988653 48999999999987642210 0111111111 112367899999999999997643
Q ss_pred CCCCceEEecCCccc
Q 047628 213 TSMGKIYELGGPDIF 227 (327)
Q Consensus 213 ~~~~~~~~v~~~~~~ 227 (327)
...|+.|++.++...
T Consensus 229 ~~~G~~~~v~gG~~~ 243 (244)
T 3d3w_A 229 MTTGSTLPVEGGFWA 243 (244)
T ss_dssp TCCSCEEEESTTGGG
T ss_pred CCCCCEEEECCCccC
Confidence 225889999987543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.1e-24 Score=182.47 Aligned_cols=223 Identities=16% Similarity=0.112 Sum_probs=153.6
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--------CCCeeEEeeCCCChhHHHH
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--------LGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--------~~~v~~~~~Dl~~~~~~~~ 72 (327)
|...+++++++||||+|+||++++++|+++|++|++++|+.+........... ..++.++.+|+++++++.+
T Consensus 1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 80 (264)
T 2pd6_A 1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC 80 (264)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence 55667778999999999999999999999999999999986543222221110 0357889999999999888
Q ss_pred Hhccc--------cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCC-CC-
Q 047628 73 TMAKA--------NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGAS-SS- 130 (327)
Q Consensus 73 ~~~~~--------d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~-~~- 130 (327)
+++++ |+|||+||..... .....+++|+.++.++++++... +...+||++||.... ..
T Consensus 81 ~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 160 (264)
T 2pd6_A 81 LLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV 160 (264)
T ss_dssp HHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred HHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence 87653 9999999975321 12357789999999999987653 202589999997543 22
Q ss_pred CCchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHH-HHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 131 SPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 131 ~~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
....|+.+|.++|.+.+.. +++++++|||.++++...... .+....... . ....+.+.+|+|+
T Consensus 161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~ 231 (264)
T 2pd6_A 161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEM--I-------PMGHLGDPEDVAD 231 (264)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGG--C-------TTCSCBCHHHHHH
T ss_pred CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHh--C-------CCCCCCCHHHHHH
Confidence 2378999999998887653 589999999999987543211 111111100 1 1134678999999
Q ss_pred HHHHHhhcCC-CCCCceEEecCCccccHHHH
Q 047628 203 AVTAALKDDG-TSMGKIYELGGPDIFTVHEL 232 (327)
Q Consensus 203 ~~~~~l~~~~-~~~~~~~~v~~~~~~s~~el 232 (327)
+++.++.... ...|+.+++.++..++....
T Consensus 232 ~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 232 VVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred HHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 9999987643 22688999999877665543
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=6.8e-25 Score=187.68 Aligned_cols=228 Identities=13% Similarity=0.087 Sum_probs=156.9
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC---CCCCeeEEeeCCCChhHHHHHhcc-
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG---DLGQIVPMKFNPRDDNTIKATMAK- 76 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~~~~~~~~- 76 (327)
|...++.++++||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++.
T Consensus 1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKV 80 (267)
T ss_dssp -CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCcccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHH
Confidence 4444556899999999999999999999999999999998654322111111 113588899999999998887754
Q ss_pred ------ccEEEEccccccccCcchhHhhhhHHHHHH----HHHHHHcC--CcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ------ANVVINLIGREYETRNYSFEDVNHFMAERI----AGIAKEHG--GIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ------~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l----~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||+||..........+++|+.++..+ ++.+++.+ +..++|++||.......+ ..|+.+|.++
T Consensus 81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 160 (267)
T 2gdz_A 81 VDHFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGI 160 (267)
T ss_dssp HHHHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHH
Confidence 699999999765444456778888865544 44554432 136899999987765443 6899999999
Q ss_pred HHHHHh---------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCc--e-eeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 143 EEAVLR---------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF--F-PLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 143 E~~~~~---------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+. .++++.+++||.+.++. ...+......... . .....+.....+++.+|+|++++.++.+
T Consensus 161 ~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~ 237 (267)
T 2gdz_A 161 VGFTRSAALAANLMNSGVRLNAICPGFVNTAI---LESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED 237 (267)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEESCBSSHH---HHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhccCCcEEEEEecCcCcchh---hhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHhcC
Confidence 887764 25899999999987531 1100000000000 0 0000001123478999999999999987
Q ss_pred CCCCCCceEEecCCccccHHHH
Q 047628 211 DGTSMGKIYELGGPDIFTVHEL 232 (327)
Q Consensus 211 ~~~~~~~~~~v~~~~~~s~~el 232 (327)
+.. .|+++++.+++.+++.|+
T Consensus 238 ~~~-~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 238 DAL-NGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp TTC-SSCEEEEETTTEEEECCC
T ss_pred cCC-CCcEEEecCCCcccccCc
Confidence 765 799999999888776553
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=4e-23 Score=175.82 Aligned_cols=202 Identities=12% Similarity=0.006 Sum_probs=153.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
+++++|||||+|+||++++++|+++|++|++++|+.+.... .++.++.+|+++++++.++++ ++|
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 98 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD--------PDIHTVAGDISKPETADRIVREGIERFGRID 98 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS--------TTEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------CceEEEEccCCCHHHHHHHHHHHHHHCCCCC
Confidence 45789999999999999999999999999999998765322 258899999999999888776 689
Q ss_pred EEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCC----CchHHHhHHHH
Q 047628 79 VVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSS----PSRVFSTKAAA 142 (327)
Q Consensus 79 ~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~----~~~y~~~K~~~ 142 (327)
++||+||..... + ....+++|+.++.++++++ ++.+ ..++|++||....... ...|+.+|.+.
T Consensus 99 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~ 177 (260)
T 3un1_A 99 SLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALASLTKGGL 177 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCccHHHHHHHHHH
Confidence 999999975321 1 1356789999999999887 4555 6799999997765322 26899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM 215 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 215 (327)
+.+.+.. ++++.+++||.+.++..... ....... ......+.+++|+|++++.+.+.+.. .
T Consensus 178 ~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~---------~~p~~r~~~~~dva~av~~L~~~~~i-t 245 (260)
T 3un1_A 178 NAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE--THSTLAG---------LHPVGRMGEIRDVVDAVLYLEHAGFI-T 245 (260)
T ss_dssp HHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG--GHHHHHT---------TSTTSSCBCHHHHHHHHHHHHHCTTC-C
T ss_pred HHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH--HHHHHhc---------cCCCCCCcCHHHHHHHHHHhcccCCC-C
Confidence 9887654 48999999999998743210 0111111 11123567899999999998555544 7
Q ss_pred CceEEecCCcccc
Q 047628 216 GKIYELGGPDIFT 228 (327)
Q Consensus 216 ~~~~~v~~~~~~s 228 (327)
|+++++.++...+
T Consensus 246 G~~i~vdGG~~~~ 258 (260)
T 3un1_A 246 GEILHVDGGQNAG 258 (260)
T ss_dssp SCEEEESTTGGGC
T ss_pred CcEEEECCCeecc
Confidence 9999999986543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=172.71 Aligned_cols=180 Identities=12% Similarity=0.079 Sum_probs=140.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---ccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---ANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d~vi~~ 83 (327)
+|+++||||+|+||++++++|+ +|++|++++|+++ .+.+|+++++++.+++++ +|+|||+
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ 65 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQVGKVDAIVSA 65 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHHCCEEEEEEC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHhCCCCEEEEC
Confidence 4689999999999999999999 9999999999753 357999999999988876 7999999
Q ss_pred ccccccc-----Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh---
Q 047628 84 IGREYET-----RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE--- 149 (327)
Q Consensus 84 a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~--- 149 (327)
||..... +. ...+++|+.++.++++++...- +-.++|++||...+...+ ..|+.+|...|.+.+..
T Consensus 66 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e 145 (202)
T 3d7l_A 66 TGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIE 145 (202)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHH
Confidence 9964321 11 2456889999999999998761 015899999987654433 68999999999998764
Q ss_pred ---CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEec
Q 047628 150 ---LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELG 222 (327)
Q Consensus 150 ---~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~ 222 (327)
+++++++||+.++++... . . +......+++++|+|++++.++... . .|++|++.
T Consensus 146 ~~~gi~v~~v~pg~v~~~~~~--------~--~-------~~~~~~~~~~~~dva~~~~~~~~~~-~-~G~~~~vd 202 (202)
T 3d7l_A 146 MPRGIRINTVSPNVLEESWDK--------L--E-------PFFEGFLPVPAAKVARAFEKSVFGA-Q-TGESYQVY 202 (202)
T ss_dssp CSTTCEEEEEEECCBGGGHHH--------H--G-------GGSTTCCCBCHHHHHHHHHHHHHSC-C-CSCEEEEC
T ss_pred ccCCeEEEEEecCccCCchhh--------h--h-------hhccccCCCCHHHHHHHHHHhhhcc-c-cCceEecC
Confidence 588999999999865311 0 0 1112357899999999999888543 3 57888873
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-23 Score=176.82 Aligned_cols=216 Identities=14% Similarity=0.070 Sum_probs=151.1
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
|.+.++.+++|||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|+++++++.++++
T Consensus 1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (257)
T 3tpc_A 1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG--AAVRFRNADVTNEADATAALAFAKQE 78 (257)
T ss_dssp ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEccCCCHHHHHHHHHHHHHH
Confidence 5566677899999999999999999999999999999999876544333332 368899999999999888776
Q ss_pred --cccEEEEcccccccc------------CcchhHhhhhHHHHHHHHHHHHc----------CCcceEEEEeccCCCCCC
Q 047628 76 --KANVVINLIGREYET------------RNYSFEDVNHFMAERIAGIAKEH----------GGIMRFIQISCLGASSSS 131 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~------------~~~~~~~~n~~~~~~l~~a~~~~----------~~v~~~v~~Ss~~v~~~~ 131 (327)
++|++||+||..... .....+++|+.++.++++++... + ..++|++||.......
T Consensus 79 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~-~g~iv~isS~~~~~~~ 157 (257)
T 3tpc_A 79 FGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGE-RGVIVNTASIAAFDGQ 157 (257)
T ss_dssp HSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHCC
T ss_pred cCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCC-CeEEEEEechhhccCC
Confidence 689999999975321 11346789999999999988753 2 4589999997654333
Q ss_pred --CchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHH-HHHHHHhhcCceeeecCCCceecceeHHHHH
Q 047628 132 --PSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201 (327)
Q Consensus 132 --~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 201 (327)
...|+.+|.+.+.+.+.. ++++.+++||.+.++...... ....... ...+. ...+.+.+|+|
T Consensus 158 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~--~~~p~------~~r~~~~~dva 229 (257)
T 3tpc_A 158 IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALA--ASVPF------PPRLGRAEEYA 229 (257)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSS------SCSCBCHHHHH
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHH--hcCCC------CCCCCCHHHHH
Confidence 378999999998886543 589999999999876322111 1111111 01111 03567899999
Q ss_pred HHHHHHhhcCCCCCCceEEecCCcccc
Q 047628 202 AAVTAALKDDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 202 ~~~~~~l~~~~~~~~~~~~v~~~~~~s 228 (327)
++++.+++.... .|+++++.++..++
T Consensus 230 ~~v~~l~s~~~i-tG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 230 ALVKHICENTML-NGEVIRLDGALRMA 255 (257)
T ss_dssp HHHHHHHHCTTC-CSCEEEESTTCCC-
T ss_pred HHHHHHcccCCc-CCcEEEECCCccCC
Confidence 999999987554 79999999986654
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=176.91 Aligned_cols=202 Identities=15% Similarity=0.060 Sum_probs=152.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc------cccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------KANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~d~v 80 (327)
++++|||||||+||++++++|+++|++|++++|+.+ . .++.++.+|+++++++.++++ ++|+|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~l 70 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAV 70 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEE
Confidence 478999999999999999999999999999999865 1 246889999999999998887 68999
Q ss_pred EEcccccccc------------CcchhHhhhhHHHHHHHHHHHHcC---------CcceEEEEeccCCCCCC--CchHHH
Q 047628 81 INLIGREYET------------RNYSFEDVNHFMAERIAGIAKEHG---------GIMRFIQISCLGASSSS--PSRVFS 137 (327)
Q Consensus 81 i~~a~~~~~~------------~~~~~~~~n~~~~~~l~~a~~~~~---------~v~~~v~~Ss~~v~~~~--~~~y~~ 137 (327)
||+||..... .....+++|+.++.++++++.... ...+||++||...+... ...|+.
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~ 150 (242)
T 1uay_A 71 VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAA 150 (242)
T ss_dssp EECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHH
T ss_pred EEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhH
Confidence 9999874321 123567889999999999887542 01389999998664333 378999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|.+.|.+.+.. +++++++|||.++++... ....+....... .+.. ..+++++|+|++++.++.
T Consensus 151 sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~dva~~~~~l~~ 222 (242)
T 1uay_A 151 SKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQ--VPFP------PRLGRPEEYAALVLHILE 222 (242)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTT--CCSS------CSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhh--CCCc------ccCCCHHHHHHHHHHHhc
Confidence 999998887653 589999999999875321 112222222211 1210 246789999999999998
Q ss_pred cCCCCCCceEEecCCcccc
Q 047628 210 DDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 210 ~~~~~~~~~~~v~~~~~~s 228 (327)
++.. .|+.|++.++..++
T Consensus 223 ~~~~-~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 223 NPML-NGEVVRLDGALRMA 240 (242)
T ss_dssp CTTC-CSCEEEESTTCCCC
T ss_pred CCCC-CCcEEEEcCCeecC
Confidence 8544 78999999986554
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-24 Score=189.07 Aligned_cols=228 Identities=15% Similarity=0.151 Sum_probs=164.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCeeEEeeCCCChhHHHHHhcc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
++.++++||||+|+||++++++|+++|++|++++|+.+........... ..++.++.+|+++++++.++++.
T Consensus 24 l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 24 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 4568999999999999999999999999999999986543222211100 14688999999999998887764
Q ss_pred -ccEEEEccccccc--------cCcchhHhhhhHHHHHHHHHHHH-----cCCcceEEEEeccCCCCCC--CchHHHhHH
Q 047628 77 -ANVVINLIGREYE--------TRNYSFEDVNHFMAERIAGIAKE-----HGGIMRFIQISCLGASSSS--PSRVFSTKA 140 (327)
Q Consensus 77 -~d~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~~-----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~ 140 (327)
+|+|||+||.... ......+++|+.++.++++++.. .+ ..++|++||....... ...|+.+|.
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~ 182 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQK-GAAFLSITTIYAETGSGFVVPSASAKA 182 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CEEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CCEEEEEcccccccCCCCcchhHHHHH
Confidence 4999999996422 11235778899999999887753 23 4699999997554322 368999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCC--hhHH--HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTED--RLLN--KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+.|.+.+.. +++++++|||.++++.. .... ......... .+ ...+.+++|+|++++.++.
T Consensus 183 a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~p-------~~~~~~~~dva~~~~~l~~ 253 (302)
T 1w6u_A 183 GVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGR--IP-------CGRLGTVEELANLAAFLCS 253 (302)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTT--CT-------TSSCBCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhc--CC-------cCCCCCHHHHHHHHHHHcC
Confidence 999888653 58899999999987621 1100 011111111 11 1246789999999999997
Q ss_pred cCCC-CCCceEEecCCccccHHHHHHHHHHHhhc
Q 047628 210 DDGT-SMGKIYELGGPDIFTVHELAELMYDTIRE 242 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~~~s~~el~~~i~~~~g~ 242 (327)
.... ..|+.|++.++..+++.|+++.+.+..|.
T Consensus 254 ~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g~ 287 (302)
T 1w6u_A 254 DYASWINGAVIKFDGGEEVLISGEFNDLRKVTKE 287 (302)
T ss_dssp GGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCHH
T ss_pred CcccccCCCEEEECCCeeeccCCccccchhhccc
Confidence 5432 25889999999889999988888777664
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.91 E-value=5.8e-23 Score=173.93 Aligned_cols=209 Identities=16% Similarity=0.094 Sum_probs=152.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-C-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-G-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++||||+|+||++++++|+++|++|++++|+.+......... . ...++.++.+|+++++++.++++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 478999999999999999999999999999999865432222111 0 11368899999999999988876 68
Q ss_pred cEEEEccccccccC-----------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 78 NVVINLIGREYETR-----------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
|+|||+||...... ....+++|+.++.++.+++ ++.+ ..++|++||.......+ ..|+.+|.
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSKG 160 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCchhHHHHHH
Confidence 99999998743211 1346688998887666655 4456 68999999987654433 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChh-H--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRL-L--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.|.+.+.. +++++++|||.++++.... . ..+....... .+ ...+.+.+|+|++++.++..
T Consensus 161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~l~~~ 231 (250)
T 2cfc_A 161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLAR--IP-------QKEIGTAAQVADAVMFLAGE 231 (250)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTT--CT-------TCSCBCHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCc
Confidence 999887654 5899999999999885432 1 1222222211 11 12467899999999999986
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
+.. ..|+.+++.++.
T Consensus 232 ~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 232 DATYVNGAALVMDGAY 247 (250)
T ss_dssp TCTTCCSCEEEESTTG
T ss_pred hhhcccCCEEEECCce
Confidence 542 258899998864
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.3e-24 Score=179.61 Aligned_cols=214 Identities=16% Similarity=0.104 Sum_probs=154.0
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|.+.+++++++||||+|+||++++++|+++|++|++++|+.++......... ...++.++.+|++|++++.++++
T Consensus 1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (248)
T 2pnf_A 1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIY 80 (248)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence 5666777899999999999999999999999999999998654322111110 01368889999999999988876
Q ss_pred ----cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCC-CC-CCchHHH
Q 047628 76 ----KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGAS-SS-SPSRVFS 137 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~-~~-~~~~y~~ 137 (327)
++|+|||+||..... .....+++|+.++.++++++ ++.+ ..+||++||.... .. ....|+.
T Consensus 81 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~ 159 (248)
T 2pnf_A 81 NLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYST 159 (248)
T ss_dssp HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHH
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCCCCchHHH
Confidence 689999999975321 11357788999996666654 4556 6899999997542 22 2378999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|.+.|.+.+.. ++++++++||.++++....+ ..+....... .+ ...+++++|+|++++.++.
T Consensus 160 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~l~~ 230 (248)
T 2pnf_A 160 TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQ--IP-------LGRFGSPEEVANVVLFLCS 230 (248)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHT--CT-------TSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhc--CC-------CCCccCHHHHHHHHHHHhC
Confidence 999999887653 58999999999987643221 1111111111 11 1347899999999999987
Q ss_pred cCC-CCCCceEEecCC
Q 047628 210 DDG-TSMGKIYELGGP 224 (327)
Q Consensus 210 ~~~-~~~~~~~~v~~~ 224 (327)
... ...|++|++.++
T Consensus 231 ~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 231 ELASYITGEVIHVNGG 246 (248)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred chhhcCCCcEEEeCCC
Confidence 642 225889999886
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.1e-22 Score=173.20 Aligned_cols=211 Identities=13% Similarity=0.082 Sum_probs=154.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++.++|+||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++ +
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999999999999998654322211110 11468999999999999888775 5
Q ss_pred ccEEEEcccccc-cc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC----chHHHhH
Q 047628 77 ANVVINLIGREY-ET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP----SRVFSTK 139 (327)
Q Consensus 77 ~d~vi~~a~~~~-~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~----~~y~~~K 139 (327)
+|+|||+||... .. + ....+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~Y~~sK 169 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASK 169 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCCHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCCCCccccHHHH
Confidence 899999999654 11 1 135678899999999888754 35 57999999976543322 6799999
Q ss_pred HHHHHHHHh-------hCCCeEEEecCeeecCCCh-hH--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLR-------ELPWATIMRPAAMIGTEDR-LL--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~-------~~~~~~i~r~~~~~G~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.|.+.+. .+++++++|||.++++... .. +.+........ + ...+++.+|+|++++.++.
T Consensus 170 ~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~dva~~~~~l~~ 240 (260)
T 3awd_A 170 AGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGT--P-------MGRVGQPDEVASVVQFLAS 240 (260)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTC--T-------TSSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcC--C-------cCCCCCHHHHHHHHHHHhC
Confidence 999988865 3589999999999988643 11 12222222211 1 1246889999999999987
Q ss_pred cCC-CCCCceEEecCCc
Q 047628 210 DDG-TSMGKIYELGGPD 225 (327)
Q Consensus 210 ~~~-~~~~~~~~v~~~~ 225 (327)
... ...|++|++.++.
T Consensus 241 ~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 241 DAASLMTGAIVNVDAGF 257 (260)
T ss_dssp GGGTTCCSCEEEESTTT
T ss_pred chhccCCCcEEEECCce
Confidence 543 2268899999864
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.5e-23 Score=175.55 Aligned_cols=211 Identities=17% Similarity=0.066 Sum_probs=154.8
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
|...++.++++||||+|+||++++++|+++|++|++++|+.++......... .++.++.+|+++++++.++++
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~ 78 (260)
T 1nff_A 1 MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQWKAAVDTAVTA 78 (260)
T ss_dssp -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--cCceEEEecCCCHHHHHHHHHHHHHH
Confidence 5566777899999999999999999999999999999998654332222221 247889999999999988876
Q ss_pred --cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|+|||+||..... .....+++|+.++.++.++ +++.+ ..++|++||.......+ ..|+.+|
T Consensus 79 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK 157 (260)
T 1nff_A 79 FGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATK 157 (260)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCCCchhHHHHH
Confidence 689999999975321 1134678899988655554 45556 67999999987754443 6899999
Q ss_pred HHHHHHHHh-------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 140 AAAEEAVLR-------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 140 ~~~E~~~~~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.|.+.+. .+++++++|||.++++.... . ...+. ......+.+.+|+|++++.++....
T Consensus 158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------~-~~~~~----~~~~~~~~~~~dvA~~v~~l~s~~~ 224 (260)
T 1nff_A 158 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDW--------V-PEDIF----QTALGRAAEPVEVSNLVVYLASDES 224 (260)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTT--------S-CTTCS----CCSSSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCcccc--------c-hhhHH----hCccCCCCCHHHHHHHHHHHhCccc
Confidence 999988765 35899999999998763221 0 01110 0112356889999999999987643
Q ss_pred C-CCCceEEecCCccc
Q 047628 213 T-SMGKIYELGGPDIF 227 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~ 227 (327)
. ..|+.|++.++...
T Consensus 225 ~~~~G~~~~v~gG~~~ 240 (260)
T 1nff_A 225 SYSTGAEFVVDGGTVA 240 (260)
T ss_dssp TTCCSCEEEESTTGGG
T ss_pred cCCcCCEEEECCCeec
Confidence 2 25889999997643
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=8e-23 Score=175.08 Aligned_cols=212 Identities=16% Similarity=0.072 Sum_probs=159.3
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
|.+.++.++++||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|+++++++.++++
T Consensus 5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 82 (271)
T 3tzq_B 5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG--RGAVHHVVDLTNEVSVRALIDFTIDT 82 (271)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 3444567899999999999999999999999999999999877544444333 468899999999999888776
Q ss_pred --cccEEEEccccccc-c------Cc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 --KANVVINLIGREYE-T------RN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 --~~d~vi~~a~~~~~-~------~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|++||+||.... . .. ...+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.
T Consensus 83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~a 161 (271)
T 3tzq_B 83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYAC 161 (271)
T ss_dssp HSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCSSCHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCCCChHHHH
Confidence 68999999997522 1 11 357789999999999988 5555 57999999987664443 78999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
+|.+.+.+.+.. ++++.+++||.+.++... .-.......... .+ ...+.+.+|+|++++.++
T Consensus 162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~-------~~r~~~p~dvA~~v~~L~ 232 (271)
T 3tzq_B 162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATH--HL-------AGRIGEPHEIAELVCFLA 232 (271)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTT--ST-------TSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHh
Confidence 999999887653 589999999999987432 112222222211 11 124567899999999999
Q ss_pred hcCCC-CCCceEEecCC
Q 047628 209 KDDGT-SMGKIYELGGP 224 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~ 224 (327)
..... ..|+++++.++
T Consensus 233 s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 233 SDRAAFITGQVIAADSG 249 (271)
T ss_dssp SGGGTTCCSCEEEESTT
T ss_pred CcccCCcCCCEEEECCC
Confidence 76532 26899999997
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.6e-23 Score=174.00 Aligned_cols=209 Identities=14% Similarity=0.095 Sum_probs=150.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCe-eEEeeCCCChhHHHHHhc------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQI-VPMKFNPRDDNTIKATMA------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v-~~~~~Dl~~~~~~~~~~~------~~ 77 (327)
+++++++||||+|+||++++++|+++|++|++++|+.++........+ .++ .++.+|+++++++.++++ ++
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i 86 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG--AAVAARIVADVTDAEAMTAAAAEAEAVAPV 86 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--ccceeEEEEecCCHHHHHHHHHHHHhhCCC
Confidence 445789999999999999999999999999999998654332222222 245 888999999999887763 68
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC----chHHHhHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP----SRVFSTKAA 141 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~----~~y~~~K~~ 141 (327)
|+|||+||...... ....+++|+.++.++++++ ++.+ ..+||++||.......+ ..|+.+|.+
T Consensus 87 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a 165 (254)
T 2wsb_A 87 SILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQFASSYMASKGA 165 (254)
T ss_dssp CEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCBHHHHHHHHH
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCCCcchHHHHHHHH
Confidence 99999999753211 1346778999977666654 4556 68999999987653332 679999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.|.+.+.. +++++++|||.++++..... +.+....... .+ ...+++++|+|++++.++...
T Consensus 166 ~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~l~~~~ 236 (254)
T 2wsb_A 166 VHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDM--TP-------MGRCGEPSEIAAAALFLASPA 236 (254)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHT--ST-------TSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhc--CC-------CCCCCCHHHHHHHHHHHhCcc
Confidence 99887653 58999999999987532111 1111112111 11 135789999999999998754
Q ss_pred C-CCCCceEEecCCc
Q 047628 212 G-TSMGKIYELGGPD 225 (327)
Q Consensus 212 ~-~~~~~~~~v~~~~ 225 (327)
. ...|+.+++.++.
T Consensus 237 ~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 237 ASYVTGAILAVDGGY 251 (254)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred cccccCCEEEECCCE
Confidence 3 2268899998864
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=178.82 Aligned_cols=186 Identities=14% Similarity=0.069 Sum_probs=143.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---cccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---KANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~vi~~a 84 (327)
|+++||||+|+||++++++|+++ +|++++|++++......... . +++.+|++|++++.++++ ++|+|||+|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~---~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~a 74 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG---A-RALPADLADELEAKALLEEAGPLDLLVHAV 74 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT---C-EECCCCTTSHHHHHHHHHHHCSEEEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc---C-cEEEeeCCCHHHHHHHHHhcCCCCEEEECC
Confidence 57999999999999999999998 99999997654322222221 2 788999999999999988 799999999
Q ss_pred cccccc--------CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--CchHHHhHHHHHHHHHhh-----
Q 047628 85 GREYET--------RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--PSRVFSTKAAAEEAVLRE----- 149 (327)
Q Consensus 85 ~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E~~~~~~----- 149 (327)
|..... .....+++|+.++.++++++++.+ ..+||++||..++... ...|+.+|...|.+.+..
T Consensus 75 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~ 153 (207)
T 2yut_A 75 GKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELL 153 (207)
T ss_dssp CCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 975321 123577899999999999997766 7899999998764333 378999999999988663
Q ss_pred --CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEE
Q 047628 150 --LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYE 220 (327)
Q Consensus 150 --~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~ 220 (327)
+++++++||+.++++.. . +.+.....+++++|+|++++.+++++.. +.+++
T Consensus 154 ~~gi~v~~v~pg~v~t~~~----------~--------~~~~~~~~~~~~~dva~~~~~~~~~~~~--~~~~~ 206 (207)
T 2yut_A 154 REGVHLVLVRLPAVATGLW----------A--------PLGGPPKGALSPEEAARKVLEGLFREPV--PALLE 206 (207)
T ss_dssp TTTCEEEEECCCCBCSGGG----------G--------GGTSCCTTCBCHHHHHHHHHHHHC--CC--CSCCC
T ss_pred hhCCEEEEEecCcccCCCc----------c--------ccCCCCCCCCCHHHHHHHHHHHHhCCCC--ccccc
Confidence 69999999999986530 0 1122336789999999999999987764 44443
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.90 E-value=5.2e-23 Score=173.91 Aligned_cols=212 Identities=14% Similarity=0.120 Sum_probs=144.4
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
.+++++++||||+|+||++++++|+++|++|+++ .|+++.......... ...++.++.+|++|++++.++++
T Consensus 2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 3556899999999999999999999999999999 555443222111110 11468899999999999888776
Q ss_pred -cccEEEEccccccc--------cCcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCC-CCCC-CchHHHhHH
Q 047628 76 -KANVVINLIGREYE--------TRNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGA-SSSS-PSRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v-~~~~-~~~y~~~K~ 140 (327)
++|+|||+||.... ......+++|+.++.++.+++.. .+ ..+||++||... +... ...|+.+|.
T Consensus 82 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~ 160 (247)
T 2hq1_A 82 GRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASKA 160 (247)
T ss_dssp SCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcHhHHHHH
Confidence 68999999997532 12246788999998888877653 45 679999999744 3322 378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.|.+.+.. ++++.+++||.+.++....+ ......... ......+++++|+|++++.++..+.
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~ 231 (247)
T 2hq1_A 161 GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLN---------NIPLKRFGTPEEVANVVGFLASDDS 231 (247)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHT---------TSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHh---------hCCCCCCCCHHHHHHHHHHHcCccc
Confidence 999888664 58899999998875311111 111111111 1112357899999999999887643
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|++|+++++.
T Consensus 232 ~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 232 NYITGQVINIDGGL 245 (247)
T ss_dssp TTCCSCEEEESTTC
T ss_pred ccccCcEEEeCCCc
Confidence 2 258899999874
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-23 Score=176.26 Aligned_cols=214 Identities=14% Similarity=0.100 Sum_probs=151.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------A 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~ 77 (327)
++.++++||||+|+||++++++|+++|++|++++|+.+.............++.++.+|+++++++.++++. +
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 556899999999999999999999999999999998654332222222114689999999999998887764 8
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCc-ceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGI-MRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v-~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
|+|||+||...... ....+++|+.++.++.+++ ++.+ . .+||++||...+...+ ..|+.+|.+.
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 162 (251)
T 1zk4_A 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGDPSLGAYNASKGAV 162 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCCCCCccchHHHHHH
Confidence 99999999753211 1347788988776666554 4455 5 7999999987654433 6899999999
Q ss_pred HHHHHh---------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLR---------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~---------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
|.+.+. .+++++++|||.++++.......... ... . ........+++.+|+|++++.++..+..
T Consensus 163 ~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~---~---~~~~~~~~~~~~~dva~~~~~l~~~~~~ 235 (251)
T 1zk4_A 163 RIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE-AMS---Q---RTKTPMGHIGEPNDIAYICVYLASNESK 235 (251)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHH-HHT---S---TTTCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhh-hHH---H---hhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 987753 35889999999998652211110000 000 0 0111123478999999999999976432
Q ss_pred -CCCceEEecCCcc
Q 047628 214 -SMGKIYELGGPDI 226 (327)
Q Consensus 214 -~~~~~~~v~~~~~ 226 (327)
..|+.|++.++..
T Consensus 236 ~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 236 FATGSEFVVDGGYT 249 (251)
T ss_dssp TCCSCEEEESTTGG
T ss_pred cccCcEEEECCCcc
Confidence 2588999998754
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=172.37 Aligned_cols=212 Identities=15% Similarity=0.006 Sum_probs=153.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.......... .++.++++|++|++++.++++ ++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~~~~g~i 87 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE--NGGFAVEVDVTKRASVDAAMQKAIDALGGF 87 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT--TCCEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--cCCeEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 345799999999999999999999999999999998654332222222 257889999999999988876 68
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... .....+++|+.++.++++++... +...++|++||.......| ..|+.+|.+.+
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 167 (263)
T 3ak4_A 88 DLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVF 167 (263)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHH
Confidence 9999999974321 11346788999999998887542 2136899999987664444 68999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHH------------HHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLN------------KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
.+.+.. ++++.+++||.++++...... ....... .......+++.+|+|+++
T Consensus 168 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~~~~~~~dvA~~v 238 (263)
T 3ak4_A 168 GWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYV---------SLTPLGRIEEPEDVADVV 238 (263)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHH---------HTCTTCSCBCHHHHHHHH
T ss_pred HHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHH---------hcCCCCCCcCHHHHHHHH
Confidence 887654 599999999999865321110 0001111 011123578999999999
Q ss_pred HHHhhcCC-CCCCceEEecCCccc
Q 047628 205 TAALKDDG-TSMGKIYELGGPDIF 227 (327)
Q Consensus 205 ~~~l~~~~-~~~~~~~~v~~~~~~ 227 (327)
+.++..+. ...|++|++.++..+
T Consensus 239 ~~l~s~~~~~~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 239 VFLASDAARFMTGQGINVTGGVRM 262 (263)
T ss_dssp HHHHSGGGTTCCSCEEEESSSSSC
T ss_pred HHHhCccccCCCCCEEEECcCEeC
Confidence 99997653 126889999987543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5e-23 Score=175.83 Aligned_cols=212 Identities=15% Similarity=0.126 Sum_probs=155.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.+++++++||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|+++++++.++++ +
T Consensus 9 ~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (265)
T 2o23_A 9 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--NNCVFAPADVTSEKDVQTALALAKGKFGR 86 (265)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 3456899999999999999999999999999999999876543333332 368899999999999988876 6
Q ss_pred ccEEEEcccccccc-----------C---cchhHhhhhHHHHHHHHHHHHc----------CCcceEEEEeccCCCCCC-
Q 047628 77 ANVVINLIGREYET-----------R---NYSFEDVNHFMAERIAGIAKEH----------GGIMRFIQISCLGASSSS- 131 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----------~---~~~~~~~n~~~~~~l~~a~~~~----------~~v~~~v~~Ss~~v~~~~- 131 (327)
+|+|||+||..... . ....+++|+.++.++++++... + ..+||++||.......
T Consensus 87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~ 165 (265)
T 2o23_A 87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEGQV 165 (265)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHCCT
T ss_pred CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhcCCCC
Confidence 89999999974321 1 1346788999999999988764 4 5789999997654333
Q ss_pred -CchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHH-HHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 132 -PSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNK-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 132 -~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
...|+.+|.+.+.+.+.. ++++.+++||.+.++....... ........ .+. ...+++.+|+|+
T Consensus 166 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~dva~ 237 (265)
T 2o23_A 166 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQ--VPF------PSRLGDPAEYAH 237 (265)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHT--CSS------SCSCBCHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHc--CCC------cCCCCCHHHHHH
Confidence 368999999988887643 5899999999998653221111 11111111 111 024678999999
Q ss_pred HHHHHhhcCCCCCCceEEecCCccc
Q 047628 203 AVTAALKDDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 203 ~~~~~l~~~~~~~~~~~~v~~~~~~ 227 (327)
+++.+++.+.. .|+.+++.++..+
T Consensus 238 ~~~~l~~~~~~-~G~~i~vdgG~~~ 261 (265)
T 2o23_A 238 LVQAIIENPFL-NGEVIRLDGAIRM 261 (265)
T ss_dssp HHHHHHHCTTC-CSCEEEESTTCCC
T ss_pred HHHHHhhcCcc-CceEEEECCCEec
Confidence 99999986655 7899999987544
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=177.24 Aligned_cols=214 Identities=13% Similarity=0.036 Sum_probs=153.5
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC-CCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG-CEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~-~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
..++.++++||||+|+||++++++|+++|++|++++|+ ++.......... ...++.++.+|+++++++.++++
T Consensus 3 ~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 3 PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAK 82 (258)
T ss_dssp GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999998 554332221110 11468899999999999988876
Q ss_pred --cccEEEEcccc-cccc-----C---cchhHhhhhHHHHHHHHHHHHc--------CCcceEEEEeccCCCC-C--CCc
Q 047628 76 --KANVVINLIGR-EYET-----R---NYSFEDVNHFMAERIAGIAKEH--------GGIMRFIQISCLGASS-S--SPS 133 (327)
Q Consensus 76 --~~d~vi~~a~~-~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~--------~~v~~~v~~Ss~~v~~-~--~~~ 133 (327)
++|+|||+||. .... + ....+++|+.++.++++++... +...++|++||..... . ...
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~ 162 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAG 162 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCch
Confidence 78999999996 2211 1 1346788999999888876431 1125899999976542 2 237
Q ss_pred hHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 134 RVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 134 ~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.|+.+|.+.|.+.+.+ ++++.++||+.++++.... ...+....... . ....+++++|+|++++
T Consensus 163 ~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~ 233 (258)
T 3afn_B 163 LYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNG--I-------PMGRFGTAEEMAPAFL 233 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTT--C-------TTCSCBCGGGTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhcc--C-------CCCcCCCHHHHHHHHH
Confidence 8999999999887653 5899999999999864321 12222222221 1 1235789999999999
Q ss_pred HHhhcCC--CCCCceEEecCCc
Q 047628 206 AALKDDG--TSMGKIYELGGPD 225 (327)
Q Consensus 206 ~~l~~~~--~~~~~~~~v~~~~ 225 (327)
.++..+. ...|++|++.++.
T Consensus 234 ~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 234 FFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp HHHCHHHHTTCCSEEEEESTTS
T ss_pred HHhCcchhccccCCEEeECCCc
Confidence 9987542 1158899999865
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.3e-23 Score=174.76 Aligned_cols=214 Identities=15% Similarity=0.074 Sum_probs=153.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHh--------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATM--------A 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~--------~ 75 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.+++ .
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 86 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHG 86 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999999999998654322222110 1136888999999999888777 3
Q ss_pred cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|+|||+||..... .....+++|+.++.++++++. +.+ ..++|++||.......+ ..|+.+|.+
T Consensus 87 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a 165 (260)
T 2ae2_A 87 KLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKGA 165 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCcchHHHHHHH
Confidence 589999999974321 113467899999999988874 455 67999999987654433 689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHH---HHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQ---FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.|.+.+.. ++++.+++||.+.++..... ..... .... ......+.+.+|+|++++.++
T Consensus 166 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dvA~~v~~l~ 236 (260)
T 2ae2_A 166 MDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID---------RCALRRMGEPKELAAMVAFLC 236 (260)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH---------TSTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHc
Confidence 99988754 58899999999875311000 00001 1111 111235789999999999988
Q ss_pred hcCCC-CCCceEEecCCcccc
Q 047628 209 KDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~~s 228 (327)
..... ..|+++++.++..++
T Consensus 237 s~~~~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 237 FPAASYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp SGGGTTCCSCEEEESTTGGGC
T ss_pred CccccCCCCCEEEECCCcccc
Confidence 75432 268999999986543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.90 E-value=5.7e-23 Score=175.63 Aligned_cols=213 Identities=16% Similarity=0.074 Sum_probs=142.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHh--------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATM--------A 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~--------~ 75 (327)
+++++|+||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.+++ .
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 456899999999999999999999999999999998654322221110 1136888999999999888777 4
Q ss_pred cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|+|||+||..... .....+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+|.+
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a 170 (266)
T 1xq1_A 92 KLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSATKGA 170 (266)
T ss_dssp CCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCCCCchHHHHHHH
Confidence 589999999974321 11346789999999999988 4556 68999999987654433 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.|.+.+.. +++++++|||.++++..... ..+...... ......+++.+|+|++++.++....
T Consensus 171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~ 241 (266)
T 1xq1_A 171 LNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVIS---------RKPLGRFGEPEEVSSLVAFLCMPAA 241 (266)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCccc
Confidence 99888653 69999999999998743211 111111110 0111246789999999999987543
Q ss_pred C-CCCceEEecCCccc
Q 047628 213 T-SMGKIYELGGPDIF 227 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~ 227 (327)
. ..|+++++.++..+
T Consensus 242 ~~~~G~~~~v~gG~~~ 257 (266)
T 1xq1_A 242 SYITGQTICVDGGLTV 257 (266)
T ss_dssp TTCCSCEEECCCCEEE
T ss_pred cCccCcEEEEcCCccc
Confidence 2 25889999997643
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-22 Score=170.27 Aligned_cols=214 Identities=15% Similarity=0.090 Sum_probs=150.1
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC-CCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC-EDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
|.+.++.++++||||+|+||++++++|+++|++|++++|++ +.....+...+ .++.++.+|+++++++.++++
T Consensus 1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (249)
T 2ew8_A 1 MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG--RRVLTVKCDVSQPGDVEAFGKQVIS 78 (249)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcC--CcEEEEEeecCCHHHHHHHHHHHHH
Confidence 55667778999999999999999999999999999999987 43322232222 468899999999998887754
Q ss_pred ---cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 ---KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
++|+|||+||..... + ....+++|+.++.++.++ +++.+ ..++|++||.......+ ..|+.+
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 157 (249)
T 2ew8_A 79 TFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYIST 157 (249)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCchhHHHH
Confidence 689999999974321 1 134678899998777777 45555 67999999987654433 789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHH-HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
|.+.+.+.+.. ++++.+++||.+.++... ... .... .. ..+.. ....+.+.+|+|++++.++.
T Consensus 158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~--~~~~~-----~~~~~~~p~dva~~~~~l~s 229 (249)
T 2ew8_A 158 KAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFD-VL--PNMLQ-----AIPRLQVPLDLTGAAAFLAS 229 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTS-----SSCSCCCTHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhh-HH--HHhhC-----ccCCCCCHHHHHHHHHHHcC
Confidence 99999888654 589999999999865321 110 0000 00 00000 11246889999999999997
Q ss_pred cCC-CCCCceEEecCCc
Q 047628 210 DDG-TSMGKIYELGGPD 225 (327)
Q Consensus 210 ~~~-~~~~~~~~v~~~~ 225 (327)
... ...|+.+++.++.
T Consensus 230 ~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 230 DDASFITGQTLAVDGGM 246 (249)
T ss_dssp GGGTTCCSCEEEESSSC
T ss_pred cccCCCCCcEEEECCCc
Confidence 543 2268899999864
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-23 Score=174.59 Aligned_cols=224 Identities=14% Similarity=0.038 Sum_probs=153.5
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC---CCCCeeEEeeCCCChhHHHHHhc--
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG---DLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~---~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
|.+.++++++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (260)
T 2z1n_A 1 MDLGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKA 80 (260)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHH
Confidence 5666677899999999999999999999999999999998654322221110 01258899999999999988876
Q ss_pred ----cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ----KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|+|||+||..... . -...+++|+.++.++.+++ ++.+ ..++|++||...+...+ ..|+.
T Consensus 81 ~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~ 159 (260)
T 2z1n_A 81 RDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQDLALSNI 159 (260)
T ss_dssp HHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred HHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCchhHH
Confidence 589999999964321 1 1346788998886666654 4556 67999999987765444 68999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHH--HHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQ--FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+|.+.+.+.+.. ++++.+++||.+.++.... ...... ...................+.+.+|+|++++.+
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l 239 (260)
T 2z1n_A 160 MRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFL 239 (260)
T ss_dssp HTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHH
Confidence 999998887653 5899999999998774320 000000 000000000000111112467899999999999
Q ss_pred hhcCC-CCCCceEEecCCc
Q 047628 208 LKDDG-TSMGKIYELGGPD 225 (327)
Q Consensus 208 l~~~~-~~~~~~~~v~~~~ 225 (327)
+.... ...|+.+++.++.
T Consensus 240 ~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 240 ASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp TSGGGTTCCSCEEEESTTT
T ss_pred hCccccCCCCCEEEeCCCc
Confidence 97643 2268899998864
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.5e-22 Score=170.60 Aligned_cols=216 Identities=13% Similarity=0.062 Sum_probs=154.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+. ........ + .++.+|+++++++.++++ ++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~---~-~~~~~D~~~~~~~~~~~~~~~~~~g~i 78 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG---G-AFFQVDLEDERERVRFVEEAAYALGRV 78 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT---C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh---C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 456899999999999999999999999999999998765 33222222 3 788999999998887765 57
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||...... -...+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|.+.|
T Consensus 79 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 157 (256)
T 2d1y_A 79 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLV 157 (256)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCChhHHHHHHHHH
Confidence 99999999753211 135778999999999887753 44 67999999986654333 68999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHH-HHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQ-FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++.+++||.+.++ ....+.. ...................+++++|+|++++.++..+.. .
T Consensus 158 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~ 234 (256)
T 2d1y_A 158 NLTRSLALDLAPLRIRVNAVAPGAIATE---AVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI 234 (256)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCH---HHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhhcCeEEEEEeeCCccCc---hhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence 887654 588999999988743 2211100 000001111111222234678999999999999976532 2
Q ss_pred CCceEEecCCccccH
Q 047628 215 MGKIYELGGPDIFTV 229 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~ 229 (327)
.|+.|++.++..+++
T Consensus 235 ~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 235 TGAILPVDGGMTASF 249 (256)
T ss_dssp CSCEEEESTTGGGBC
T ss_pred CCCEEEECCCccccc
Confidence 688999999876554
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-22 Score=171.49 Aligned_cols=217 Identities=16% Similarity=0.056 Sum_probs=153.9
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC-CCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|...+++++||||||+|+||++++++|+++|++|++++| +.+.......... ...++.++.+|+++++++.++++
T Consensus 1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence 444566789999999999999999999999999999999 5433221111110 11358889999999998888776
Q ss_pred ----cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ----KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|+|||+||..... .....+++|+.++.++++++... +...+||++||.......+ ..|+.
T Consensus 81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~ 160 (261)
T 1gee_A 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA 160 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHH
Confidence 689999999975321 11356788999998888876543 2135999999987654333 68999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+|.+.|.+.+.. +++++++|||.++++..... +........ ..+ ...+++.+|+|++++.+
T Consensus 161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~dva~~~~~l 231 (261)
T 1gee_A 161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVES--MIP-------MGYIGEPEEIAAVAAWL 231 (261)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHT--TCT-------TSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHh--cCC-------CCCCcCHHHHHHHHHHH
Confidence 999988877543 59999999999987643221 111111111 111 13478999999999999
Q ss_pred hhcCC-CCCCceEEecCCcc
Q 047628 208 LKDDG-TSMGKIYELGGPDI 226 (327)
Q Consensus 208 l~~~~-~~~~~~~~v~~~~~ 226 (327)
+.... ...|+.+++.++..
T Consensus 232 ~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 232 ASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HSGGGTTCCSCEEEESTTGG
T ss_pred hCccccCCCCcEEEEcCCcc
Confidence 87542 22688999998754
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.1e-23 Score=177.95 Aligned_cols=210 Identities=19% Similarity=0.147 Sum_probs=152.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC-CCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
.++.++||||||+|+||++++++|+++|++|++++| +.+..... +...+ .++.++.+|++|++++.++++
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 345689999999999999999999999999999999 43322111 11112 468899999999999988876
Q ss_pred ---cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHcCC-cceEEEEeccCCC-CCC--CchHHHhHH
Q 047628 76 ---KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEHGG-IMRFIQISCLGAS-SSS--PSRVFSTKA 140 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~~~-v~~~v~~Ss~~v~-~~~--~~~y~~~K~ 140 (327)
++|+|||+||..... . ....+++|+.++.++++++...-. -.+||++||...+ ... ...|+.+|.
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~ 175 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA 175 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHHHHHH
Confidence 689999999875321 1 135778999999999999877510 1589999998765 333 378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChh------------H--HHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRL------------L--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~------------~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
+.|.+.+.+ ++++++++||.+.++.... . ....... ........+++++|
T Consensus 176 a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~d 246 (274)
T 1ja9_A 176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL---------ANMNPLKRIGYPAD 246 (274)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHH---------HHTSTTSSCBCHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHH---------HhcCCCCCccCHHH
Confidence 999988753 5999999999997542110 0 1111111 11122346789999
Q ss_pred HHHHHHHHhhcCCC-CCCceEEecCC
Q 047628 200 VAAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 200 ~a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
+|++++.++..+.. ..|++|+++++
T Consensus 247 va~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 247 IGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhCcccccccCcEEEecCC
Confidence 99999999976432 15889999986
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-22 Score=171.80 Aligned_cols=208 Identities=13% Similarity=0.042 Sum_probs=150.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++++++|||||+|+||+++++.|+++|++|++++|+.++....+... ++.++.+|+++++++.++++ .+
T Consensus 25 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (260)
T 3gem_A 25 LSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA----GAVALYGDFSCETGIMAFIDLLKTQTSSL 100 (260)
T ss_dssp --CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH----TCEEEECCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc----CCeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 44578999999999999999999999999999999987644444332 37889999999998887775 47
Q ss_pred cEEEEccccccccCc-------chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 78 NVVINLIGREYETRN-------YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 78 d~vi~~a~~~~~~~~-------~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
|+|||+||....... ...+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|.+.+.
T Consensus 101 D~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~ 179 (260)
T 3gem_A 101 RAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSSKHIAYCATKAGLES 179 (260)
T ss_dssp SEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCSSCHHHHHHHHHHHH
T ss_pred CEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCcHhHHHHHHHHHH
Confidence 999999997532211 24778999999999888754 34 56999999987654444 789999999998
Q ss_pred HHHhh------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCce
Q 047628 145 AVLRE------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218 (327)
Q Consensus 145 ~~~~~------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 218 (327)
+.+.. ++++.+++||.+..+.... ..+....... .+ ...+.+.+|+|++++.+++.+.. .|++
T Consensus 180 l~~~la~e~~~~Irvn~v~PG~v~t~~~~~-~~~~~~~~~~--~p-------~~r~~~~edva~~v~~L~~~~~i-tG~~ 248 (260)
T 3gem_A 180 LTLSFAARFAPLVKVNGIAPALLMFQPKDD-AAYRANALAK--SA-------LGIEPGAEVIYQSLRYLLDSTYV-TGTT 248 (260)
T ss_dssp HHHHHHHHHTTTCEEEEEEECTTCC------------------CC-------SCCCCCTHHHHHHHHHHHHCSSC-CSCE
T ss_pred HHHHHHHHHCCCCEEEEEeecccccCCCCC-HHHHHHHHhc--CC-------CCCCCCHHHHHHHHHHHhhCCCC-CCCE
Confidence 87654 2888999999987653211 1111111111 11 12345679999999999975555 7999
Q ss_pred EEecCCcccc
Q 047628 219 YELGGPDIFT 228 (327)
Q Consensus 219 ~~v~~~~~~s 228 (327)
+++.++..++
T Consensus 249 i~vdGG~~~~ 258 (260)
T 3gem_A 249 LTVNGGRHVK 258 (260)
T ss_dssp EEESTTTTTC
T ss_pred EEECCCcccC
Confidence 9999987654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-22 Score=171.10 Aligned_cols=219 Identities=14% Similarity=0.069 Sum_probs=152.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+.. ...+...+ .++.++.+|++|++++.++++ +
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHG--VKAVHHPADLSDVAQIEALFALAEREFGG 79 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTS--CCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcC--CceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999987621 11122112 468889999999999988886 7
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||+||..... + ....+++|+.++.++.++ +++.+ ..++|++||.......+ ..|+.+|.+.
T Consensus 80 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~ 158 (255)
T 2q2v_A 80 VDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGV 158 (255)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCCCchhHHHHHHHH
Confidence 89999999974321 1 134678888866665554 45666 68999999987654433 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHh--hcCceeee-cCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVK--KFNFFPLF-GDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++.+++||.+.++.......-..... ........ ........+++++|+|++++.++..+.
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~ 238 (255)
T 2q2v_A 159 VGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG 238 (255)
T ss_dssp HHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCcc
Confidence 9887653 4889999999998653211110000000 00000000 112223457899999999999987643
Q ss_pred C-CCCceEEecCCcc
Q 047628 213 T-SMGKIYELGGPDI 226 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~ 226 (327)
. ..|+.|++.++..
T Consensus 239 ~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 239 SQVRGAAWNVDGGWL 253 (255)
T ss_dssp TTCCSCEEEESTTGG
T ss_pred CCCCCCEEEECCCcc
Confidence 2 2589999998754
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-23 Score=175.78 Aligned_cols=218 Identities=17% Similarity=0.104 Sum_probs=152.9
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|++..++++++||||+|+||++++++|+++|++|+++.|+.......+.... ...++.++.+|+++++++.++++
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 80 (264)
T 3i4f_A 1 MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAM 80 (264)
T ss_dssp -----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 5666667899999999999999999999999999999887654322222111 01468999999999999888775
Q ss_pred ----cccEEEEccccc--cc-----cC---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCC--CCC--c
Q 047628 76 ----KANVVINLIGRE--YE-----TR---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASS--SSP--S 133 (327)
Q Consensus 76 ----~~d~vi~~a~~~--~~-----~~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~--~~~--~ 133 (327)
++|+|||+||.. .. .. ....+++|+.++.++++++ ++.+ ..++|++||.+... ..+ .
T Consensus 81 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~ 159 (264)
T 3i4f_A 81 SHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRS 159 (264)
T ss_dssp HHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCTTCH
T ss_pred HHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCCCCc
Confidence 689999999942 11 11 1356789999999999987 5555 67999999874432 222 7
Q ss_pred hHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 134 RVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 134 ~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.|+.+|.+.+.+.+.. ++++.+++||.+.++... .......... .......+.+.+|+|++++
T Consensus 160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~p~~r~~~~~dva~~v~ 230 (264)
T 3i4f_A 160 AFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKE---------HNTPIGRSGTGEDIARTIS 230 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC-----------------CCCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHh---------hcCCCCCCcCHHHHHHHHH
Confidence 8999999998887643 489999999999876422 2222211111 1111234678899999999
Q ss_pred HHhhcCCC-CCCceEEecCCcccc
Q 047628 206 AALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 206 ~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
.++..... ..|+++++.++-...
T Consensus 231 ~l~s~~~~~itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 231 FLCEDDSDMITGTIIEVTGAVDVI 254 (264)
T ss_dssp HHHSGGGTTCCSCEEEESCSCCCC
T ss_pred HHcCcccCCCCCcEEEEcCceeec
Confidence 99986542 268999999976543
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.1e-23 Score=174.35 Aligned_cols=216 Identities=18% Similarity=0.145 Sum_probs=156.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
.++.+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3456899999999999999999999999999999998754332222111 11468899999999998887775
Q ss_pred cccEEEEcccccccc-------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 76 KANVVINLIGREYET-------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
++|++||+||..... .....+++|+.++.++++++. +.+ ..++|++||.......+ ..|+.+|.+.
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 167 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNVRMASYGSSKAAV 167 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCCCchHHHHHHHHH
Confidence 589999999975431 113467899999999999874 444 56999999987765444 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.+.. ++++..++||.+..+.... .+......... .....+.+.+|+|++++.++.....
T Consensus 168 ~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~---------~p~~r~~~~~dva~~~~~L~s~~~~ 238 (256)
T 3gaf_A 168 NHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKH---------TPLGRLGEAQDIANAALFLCSPAAA 238 (256)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTT---------CTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhc---------CCCCCCCCHHHHHHHHHHHcCCccc
Confidence 9888653 4899999999987542110 01111111111 1123567899999999999875432
Q ss_pred -CCCceEEecCCccccH
Q 047628 214 -SMGKIYELGGPDIFTV 229 (327)
Q Consensus 214 -~~~~~~~v~~~~~~s~ 229 (327)
..|+++++.++...++
T Consensus 239 ~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 239 WISGQVLTVSGGGVQEL 255 (256)
T ss_dssp TCCSCEEEESTTSCCC-
T ss_pred CccCCEEEECCCccccC
Confidence 2689999999877654
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=172.59 Aligned_cols=214 Identities=12% Similarity=-0.006 Sum_probs=151.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCCCC-chhhhcccCCCCCeeEEeeCCCCh-hHHHHHhc-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGCED-DPRHLKLMGDLGQIVPMKFNPRDD-NTIKATMA----- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~-~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~----- 75 (327)
.+++++++||||+|+||++++++|+++|++ |++++|+... ....+.......++.++.+|++|+ +++.++++
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ 81 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence 456789999999999999999999999996 9999998642 112222221123688999999998 87777665
Q ss_pred --cccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcC------CcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 76 --KANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHG------GIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~------~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
++|+|||+||..........+++|+.++.++++++...- +..++|++||...+...+ ..|+.+|.+.|.+
T Consensus 82 ~g~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 161 (254)
T 1sby_A 82 LKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSF 161 (254)
T ss_dssp HSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHH
Confidence 689999999986555556788999999999999886431 024799999987765444 6899999999988
Q ss_pred HHh-------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCce
Q 047628 146 VLR-------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218 (327)
Q Consensus 146 ~~~-------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~ 218 (327)
.+. .++++.+++||.+.++.......+ ........... ....+.+++|+|++++.+++... .|++
T Consensus 162 ~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~dvA~~i~~~~~~~~--~G~~ 233 (254)
T 1sby_A 162 TNSLAKLAPITGVTAYSINPGITRTPLVHTFNSW---LDVEPRVAELL---LSHPTQTSEQCGQNFVKAIEANK--NGAI 233 (254)
T ss_dssp HHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCG---GGSCTTHHHHH---TTSCCEEHHHHHHHHHHHHHHCC--TTCE
T ss_pred HHHHHHHhccCCeEEEEEecCCccCccccccchh---hhhhHHHHHHH---hcCCCCCHHHHHHHHHHHHHcCC--CCCE
Confidence 765 369999999999985411000000 00000000000 01233489999999999988544 5899
Q ss_pred EEecCCc
Q 047628 219 YELGGPD 225 (327)
Q Consensus 219 ~~v~~~~ 225 (327)
|++.++.
T Consensus 234 ~~v~gG~ 240 (254)
T 1sby_A 234 WKLDLGT 240 (254)
T ss_dssp EEEETTE
T ss_pred EEEeCCc
Confidence 9999873
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-21 Score=165.42 Aligned_cols=213 Identities=13% Similarity=0.022 Sum_probs=146.4
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
|.++.++++||||+|+||++++++|+++|++|++++|+.+.. . ..+..+.+|++|++++.++++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~----~~~~~~~~D~~d~~~~~~~~~~~~~~~g 73 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-----Q----YPFATEVMDVADAAQVAQVCQRLLAETE 73 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-----C----CSSEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-----c----CCceEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 345678999999999999999999999999999999986531 1 127788999999999988875
Q ss_pred cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|+|||+||..... .....+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+|.+
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a 152 (250)
T 2fwm_X 74 RLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASKAA 152 (250)
T ss_dssp CCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCCchHHHHHHH
Confidence 689999999974321 11357789999999998887 4455 57999999987764443 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHH---HHHH-HHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLN---KWAQ-FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.|.+.+.. ++++.+++||.+.++...... .... ..... ............+.+.+|+|++++.++..
T Consensus 153 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~p~dvA~~v~~l~s~ 230 (250)
T 2fwm_X 153 LKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGF--GEQFKLGIPLGKIARPQEIANTILFLASD 230 (250)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------CHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhh--hhcccccCCCCCCcCHHHHHHHHHHHhCc
Confidence 99887654 599999999999876322110 0000 00000 00000001112467899999999999976
Q ss_pred CCC-CCCceEEecCCccc
Q 047628 211 DGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~ 227 (327)
+.. ..|+.+++.++..+
T Consensus 231 ~~~~~tG~~i~vdGG~~~ 248 (250)
T 2fwm_X 231 LASHITLQDIVVDGGSTL 248 (250)
T ss_dssp GGTTCCSCEEEESTTTTT
T ss_pred cccCCCCCEEEECCCccc
Confidence 432 26899999987543
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=171.48 Aligned_cols=213 Identities=15% Similarity=0.086 Sum_probs=153.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhcc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
++++++|||||+|+||++++++|+++|++|++++|+.++......... ...++.++.+|++|++++.++++.
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 456789999999999999999999999999999997665432222110 014688999999999988877753
Q ss_pred -ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCC---------Cch
Q 047628 77 -ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSS---------PSR 134 (327)
Q Consensus 77 -~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~---------~~~ 134 (327)
+|+|||+||..... . ....+++|+.++.++++++... +...+||++||....... ...
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~ 171 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVF 171 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHH
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccc
Confidence 79999999975321 1 1346788999999999987543 213689999997654322 357
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
|+.+|.+.|.+.+.. +++++++|||.+.++.... ........... .+ ...+++.+|+|++++.
T Consensus 172 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~ 242 (265)
T 1h5q_A 172 YNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASN--IP-------LNRFAQPEEMTGQAIL 242 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHT--CT-------TSSCBCGGGGHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhc--Cc-------ccCCCCHHHHHHHHHh
Confidence 999999999888654 5899999999998764322 12222222111 11 1246788999999999
Q ss_pred HhhcCCC-CCCceEEecCCcc
Q 047628 207 ALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~~ 226 (327)
++..+.. ..|+.|++.++..
T Consensus 243 l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 243 LLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp HHSGGGTTCCSCEEEECTTGG
T ss_pred hccCchhcCcCcEEEecCCEe
Confidence 9876432 2689999998754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.7e-23 Score=175.53 Aligned_cols=214 Identities=15% Similarity=0.105 Sum_probs=155.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++.++++||||+|+||++++++|+++|++|++++|+.++......... ...++..+.+|+++++++.++++ +
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999999999999998654322221110 11368889999999998887775 6
Q ss_pred ccEEEEccccccc------cC---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 77 ANVVINLIGREYE------TR---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~------~~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
+|+|||+||.... .. ....+++|+.++.++++++. +.+ ..+||++||...+...+ ..|+.+|.+
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a 170 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYNVSKTA 170 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCCCchhHHHHHHH
Confidence 8999999996421 11 13467889999988888764 455 67999999987765444 689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+.+.. ++++.+++||.+.++..... ......... ..+ ...+.+.+|+|++++.++..+
T Consensus 171 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~dva~~v~~l~s~~ 241 (260)
T 2zat_A 171 LLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKE--SLR-------IRRLGNPEDCAGIVSFLCSED 241 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHH--HHT-------CSSCBCGGGGHHHHHHHTSGG
T ss_pred HHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHh--cCC-------CCCCCCHHHHHHHHHHHcCcc
Confidence 99988764 58999999999986643211 000011110 011 134678999999999998765
Q ss_pred CC-CCCceEEecCCcccc
Q 047628 212 GT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~~~s 228 (327)
.. ..|+++++.++..+|
T Consensus 242 ~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 242 ASYITGETVVVGGGTASR 259 (260)
T ss_dssp GTTCCSCEEEESTTCCCC
T ss_pred cCCccCCEEEECCCcccc
Confidence 32 268899999987665
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-22 Score=173.19 Aligned_cols=213 Identities=18% Similarity=0.145 Sum_probs=155.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCC--CCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDL--GQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+........+... .++.++.+|++|++++.++++
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 34579999999999999999999999999999999977654433332211 368899999999998877765
Q ss_pred cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCC-CC--CCchHHHhHH
Q 047628 76 KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGAS-SS--SPSRVFSTKA 140 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~-~~--~~~~y~~~K~ 140 (327)
.+|++||+||...... ....+++|+.++.++++++ ++.+ ..++|++||.... .. ....|+.+|.
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y~asKa 197 (293)
T 3rih_A 119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYGASKA 197 (293)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCTTCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCCCCHHHHHHHH
Confidence 4699999999753321 1346789999999999987 3555 5799999997653 22 2378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+++.+.+.. ++++.+++||.+.++... ....+....... .+. ..+...+|+|++++.++....
T Consensus 198 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~--~p~-------~r~~~p~dvA~~v~fL~s~~a 268 (293)
T 3rih_A 198 AQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARS--IPM-------GMLGSPVDIGHLAAFLATDEA 268 (293)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTT--STT-------SSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhc--CCC-------CCCCCHHHHHHHHHHHhCccc
Confidence 999887653 599999999999865221 112222222222 111 234567999999999987543
Q ss_pred C-CCCceEEecCCccc
Q 047628 213 T-SMGKIYELGGPDIF 227 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~ 227 (327)
. ..|+++++.++..+
T Consensus 269 ~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 269 GYITGQAIVVDGGQVL 284 (293)
T ss_dssp TTCCSCEEEESTTTTC
T ss_pred cCCCCCEEEECCCccC
Confidence 2 26899999997654
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=171.15 Aligned_cols=213 Identities=15% Similarity=0.091 Sum_probs=155.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.++.......... ..++.++++|+++++++.++++
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4468999999999999999999999999999999987654332222211 1368899999999998887775
Q ss_pred cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCC-CCC--CchHHHhHH
Q 047628 76 KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGAS-SSS--PSRVFSTKA 140 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~-~~~--~~~y~~~K~ 140 (327)
++|++||+||...... . ...+++|+.++.++++++... + ..++|++||.... ... ...|+.+|.
T Consensus 88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK~ 166 (262)
T 3pk0_A 88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGYPGWSHYGATKA 166 (262)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCCTTCHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCCChhhHHHHH
Confidence 6899999999753211 1 346789999999988887653 5 5799999997653 222 378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.+.. ++++.+++||.+.++... ....+....... .+ ...+.+.+|+|++++.++....
T Consensus 167 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~dva~~v~~L~s~~~ 237 (262)
T 3pk0_A 167 AQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARS--IP-------AGALGTPEDIGHLAAFLATKEA 237 (262)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTT--ST-------TSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHhCccc
Confidence 999888753 599999999999865211 111222222211 11 1245778999999999987653
Q ss_pred C-CCCceEEecCCccc
Q 047628 213 T-SMGKIYELGGPDIF 227 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~ 227 (327)
. ..|+++++.++..+
T Consensus 238 ~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 238 GYITGQAIAVDGGQVL 253 (262)
T ss_dssp TTCCSCEEEESTTTTC
T ss_pred cCCcCCEEEECCCeec
Confidence 2 26899999997654
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-22 Score=170.08 Aligned_cols=208 Identities=18% Similarity=0.133 Sum_probs=153.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+++++|||||+|+||++++++|+++|++|+++.|+....... +...+ .++.++++|++|++++.++++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKG--VDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--SCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 457899999999999999999999999999988865332211 12222 468899999999999888776
Q ss_pred -cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCC--CchHHHhHH
Q 047628 76 -KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSS--PSRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~ 140 (327)
++|++||+||...... ....+++|+.++.++++++ ++.+ ..++|++||....... ...|+.+|.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~ 159 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATKA 159 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHHH
Confidence 6899999999753211 1347889999999999988 4555 5799999997553222 378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.+.. ++++.+++||.+.++... ....+........+ ...+.+.+|+|++++.++....
T Consensus 160 a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p---------~~r~~~~~dva~~v~~l~s~~~ 230 (246)
T 3osu_A 160 GVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIP---------LARFGQDTDIANTVAFLASDKA 230 (246)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCT---------TCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccc
Confidence 998887643 489999999999876432 22333333322211 1345678999999999987654
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|++|++.++.
T Consensus 231 ~~itG~~i~vdgG~ 244 (246)
T 3osu_A 231 KYITGQTIHVNGGM 244 (246)
T ss_dssp TTCCSCEEEESTTS
T ss_pred cCCCCCEEEeCCCc
Confidence 3 258999999874
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=171.12 Aligned_cols=222 Identities=14% Similarity=0.087 Sum_probs=150.7
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
|.++.++++||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|+++++++.++++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG--DAALAVAADISKEADVDAAVEAALSKFG 82 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 44567899999999999999999999999999999998765443333333 468999999999998887775
Q ss_pred cccEEEEcccccccc------Cc---chhHhhhhHHHHHHHHHHHHcC-------CcceEEEEeccCCCCCCC--chHHH
Q 047628 76 KANVVINLIGREYET------RN---YSFEDVNHFMAERIAGIAKEHG-------GIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~------~~---~~~~~~n~~~~~~l~~a~~~~~-------~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|++||+||..... +. ...+++|+.++.++++++...- ...++|++||.......+ ..|+.
T Consensus 83 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a 162 (261)
T 3n74_A 83 KVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNA 162 (261)
T ss_dssp CCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHH
T ss_pred CCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHH
Confidence 579999999975321 11 3467889999888888764331 023699999987765544 67999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+|.+.+.+.+.. ++++..++||.+..+..... ..... ...............+++.+|+|++++.++..
T Consensus 163 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~ 238 (261)
T 3n74_A 163 TKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTF---MGEDS-EEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSP 238 (261)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CTTSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhh---cccCc-HHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCC
Confidence 999999887653 48899999999876532111 00000 00011111122234678999999999999965
Q ss_pred CCC-CCCceEEecCCccccHH
Q 047628 211 DGT-SMGKIYELGGPDIFTVH 230 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~s~~ 230 (327)
... ..|+++++.++..++..
T Consensus 239 ~~~~itG~~i~vdgG~~~~~~ 259 (261)
T 3n74_A 239 QASMITGVALDVDGGRSIGGR 259 (261)
T ss_dssp GGTTCCSCEEEESTTTTC---
T ss_pred cccCcCCcEEEecCCcccCCC
Confidence 432 26899999998776643
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=173.24 Aligned_cols=221 Identities=18% Similarity=0.146 Sum_probs=152.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh-hcccC--CCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH-LKLMG--DLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+++++++|||||+|+||++++++|+++|++|++++|+....... ..... ...++.++.+|++|++++.++++
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 101 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADR 101 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 35568999999999999999999999999999999954322111 11111 12468899999999999888775
Q ss_pred --cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|++||+||...... ....+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+|
T Consensus 102 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 180 (281)
T 3v2h_A 102 FGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASPFKSAYVAAK 180 (281)
T ss_dssp TSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCCCchHHHHHH
Confidence 5799999999753221 1346789999999999987 4444 56899999987654444 7899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHH--HHhhcCc-eeeecCCCceecceeHHHHHHHHHHHh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQ--FVKKFNF-FPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~--~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+.+.+.+.. ++++.+++||.+.++... ....... ....... ............+.+++|+|++++.++
T Consensus 181 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~ 260 (281)
T 3v2h_A 181 HGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLALYLA 260 (281)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHc
Confidence 9999887653 489999999999876321 1111000 0000000 111223344467899999999999999
Q ss_pred hcCCC-CCCceEEecCCc
Q 047628 209 KDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~ 225 (327)
..... ..|+++++.++.
T Consensus 261 s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 261 GDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp SSGGGGCCSCEEEESTTG
T ss_pred CCCcCCCCCcEEEECCCc
Confidence 76542 268999999874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=172.59 Aligned_cols=220 Identities=17% Similarity=0.092 Sum_probs=152.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++ +
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 99 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGP 99 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 445789999999999999999999999999999998654322221110 01368889999999998887775 5
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHc------CCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEH------GGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~------~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+|+|||+||..... . ....+++|+.++.++++++... + ..+||++||.......+ ..|+.+|.
T Consensus 100 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~ 178 (277)
T 2rhc_B 100 VDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASKH 178 (277)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCCCCccHHHHHH
Confidence 89999999974321 1 1357789999999999987554 5 57999999986653333 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHh--hcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVK--KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+.+.. ++++.+++||.+.++..... ..+..... ................+++.+|+|++++.++..
T Consensus 179 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~ 258 (277)
T 2rhc_B 179 GVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGP 258 (277)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 999887654 48899999999985421111 00000000 000000000001123578999999999999976
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
+.. ..|+++++.++.
T Consensus 259 ~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 259 GAAAVTAQALNVCGGL 274 (277)
T ss_dssp GGTTCCSCEEEESTTC
T ss_pred hhcCCCCcEEEECCCc
Confidence 532 268899999864
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.3e-22 Score=169.99 Aligned_cols=213 Identities=15% Similarity=0.081 Sum_probs=150.9
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+|.++++++|||||+|+||++++++|+++|++|++++|+.+.... ..+ .++.++++|+++++++.++++
T Consensus 4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~g 78 (257)
T 3tl3_A 4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVA---DLG--DRARFAAADVTDEAAVASALDLAETMG 78 (257)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHH---HTC--TTEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHH---hcC--CceEEEECCCCCHHHHHHHHHHHHHhC
Confidence 345567899999999999999999999999999999995433222 222 468999999999999888776
Q ss_pred cccEEEEccccccc---------cC---cchhHhhhhHHHHHHHHHHHHcC-----------CcceEEEEeccCCCCCCC
Q 047628 76 KANVVINLIGREYE---------TR---NYSFEDVNHFMAERIAGIAKEHG-----------GIMRFIQISCLGASSSSP 132 (327)
Q Consensus 76 ~~d~vi~~a~~~~~---------~~---~~~~~~~n~~~~~~l~~a~~~~~-----------~v~~~v~~Ss~~v~~~~~ 132 (327)
.+|++||+||.... .+ -...+++|+.++.++++++...- .-.++|++||.......+
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~ 158 (257)
T 3tl3_A 79 TLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQI 158 (257)
T ss_dssp CEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHH
T ss_pred CCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCC
Confidence 68999999997421 11 14577899999999999886531 134899999987765444
Q ss_pred --chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 133 --SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 133 --~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
..|+.+|.+.+.+.+.. ++++..++||.+..+....+ .......... .+.. ..+.+.+|+|+
T Consensus 159 ~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~~------~r~~~p~dva~ 230 (257)
T 3tl3_A 159 GQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQ--VPHP------SRLGNPDEYGA 230 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHT--SSSS------CSCBCHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhc--CCCC------CCccCHHHHHH
Confidence 68999999998887653 48999999999986632211 2222222211 1111 34678899999
Q ss_pred HHHHHhhcCCCCCCceEEecCCcccc
Q 047628 203 AVTAALKDDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 203 ~~~~~l~~~~~~~~~~~~v~~~~~~s 228 (327)
+++.+++++.. .|+++++.++..++
T Consensus 231 ~v~~l~s~~~i-tG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 231 LAVHIIENPML-NGEVIRLDGAIRMA 255 (257)
T ss_dssp HHHHHHHCTTC-CSCEEEESTTC---
T ss_pred HHHHHhcCCCC-CCCEEEECCCccCC
Confidence 99999987555 89999999986554
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.9e-23 Score=173.45 Aligned_cols=215 Identities=16% Similarity=0.116 Sum_probs=130.1
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+.++++++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 44557899999999999999999999999999999998655332222111 12468899999999998888776
Q ss_pred -cccEEEEcccccc---c-----cC---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCCchHHHhH
Q 047628 76 -KANVVINLIGREY---E-----TR---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSPSRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~---~-----~~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K 139 (327)
++|+|||+||... . .+ ....+++|+.++.++.+++ ++.+ ..+||++||...+. ....|+.+|
T Consensus 85 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-~~~~Y~asK 162 (253)
T 3qiv_A 85 GGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL-YSNYYGLAK 162 (253)
T ss_dssp SCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC------------CCH
T ss_pred CCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC-CCchhHHHH
Confidence 6899999998731 1 11 1357788999966665554 4555 57999999988763 346799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhH--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.+.+ ++++.+++||.+.++..... ..+...+. .......+.+++|+|++++.++..
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~~~~l~s~ 233 (253)
T 3qiv_A 163 VGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIV---------KGLPLSRMGTPDDLVGMCLFLLSD 233 (253)
T ss_dssp HHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------------------CCHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHh---------ccCCCCCCCCHHHHHHHHHHHcCc
Confidence 9999887653 48899999999987643211 11111111 111123455679999999999875
Q ss_pred CCC-CCCceEEecCCcccc
Q 047628 211 DGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~s 228 (327)
... ..|++|++.++..++
T Consensus 234 ~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 234 EASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp GGTTCCSCEEEC-------
T ss_pred cccCCCCCEEEECCCeecC
Confidence 432 268999999986543
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.4e-22 Score=172.56 Aligned_cols=217 Identities=15% Similarity=0.093 Sum_probs=155.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++++++|||||+|+||++++++|+++|++|++++|+.+.........+ .++..+++|+++++++.++++ +
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG--SKAFGVRVDVSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 3556899999999999999999999999999999998755433333332 468899999999999887775 5
Q ss_pred ccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||...... + ...+++|+.++.++.+++.. .+ ..++|++||.......+ ..|+.+|.+.
T Consensus 102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 180 (277)
T 4dqx_A 102 VDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIADRTAYVASKGAI 180 (277)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCCCChhHHHHHHHH
Confidence 899999999743211 1 34667999999988887743 33 46999999987765444 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceee---ecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL---FGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++.+++||.+..+. ....... ....... .........+.+.+|+|++++.++....
T Consensus 181 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~---~~~~~~~--~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~ 255 (277)
T 4dqx_A 181 SSLTRAMAMDHAKEGIRVNAVAPGTIDSPY---FTKIFAE--AKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRS 255 (277)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHH---HHHHHHT--CSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCcCcCch---hhhhccc--ccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCcc
Confidence 9887653 4899999999987431 1111000 0000000 1112222356789999999999987654
Q ss_pred C-CCCceEEecCCcccc
Q 047628 213 T-SMGKIYELGGPDIFT 228 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~s 228 (327)
. ..|+++++.++..++
T Consensus 256 ~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 256 RFATGSILTVDGGSSIG 272 (277)
T ss_dssp TTCCSCEEEESSSSSSC
T ss_pred CCCcCCEEEECCchhhh
Confidence 2 268999999986654
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=3.2e-22 Score=170.44 Aligned_cols=219 Identities=17% Similarity=0.129 Sum_probs=156.1
Q ss_pred cccCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 3 YVYSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 3 ~~~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
+.+++++++||||+ |+||++++++|+++|++|++++|+.+ ....+.... ..+.+.++.+|+++++++.++++
T Consensus 4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (261)
T 2wyu_A 4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE 82 (261)
T ss_dssp ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence 34556899999999 99999999999999999999999864 111121110 01247889999999998887775
Q ss_pred ---cccEEEEccccccc---------cC---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ---KANVVINLIGREYE---------TR---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~---------~~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|+|||+||.... .+ ....+++|+.++.++++++...- +-.++|++||.......+ ..|+.
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 162 (261)
T 2wyu_A 83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAI 162 (261)
T ss_dssp HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHH
Confidence 57999999997532 11 13577899999999999997752 014899999976654333 67999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+|.+.+.+.+.. ++++.+++||.+.++.... ...+........ +. ..+.+++|+|++++.+
T Consensus 163 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--p~-------~~~~~~~dva~~v~~l 233 (261)
T 2wyu_A 163 AKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTA--PL-------RRNITQEEVGNLGLFL 233 (261)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHS--TT-------SSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcC--CC-------CCCCCHHHHHHHHHHH
Confidence 999999887653 5999999999998874221 122222222111 11 2356789999999999
Q ss_pred hhcCCC-CCCceEEecCCccccHHH
Q 047628 208 LKDDGT-SMGKIYELGGPDIFTVHE 231 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~~~s~~e 231 (327)
+..... ..|++|++.++..++..|
T Consensus 234 ~s~~~~~~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 234 LSPLASGITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp HSGGGTTCCSCEEEESTTGGGBC--
T ss_pred cChhhcCCCCCEEEECCCccccCCC
Confidence 875432 258899999987665433
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.89 E-value=7.6e-22 Score=166.95 Aligned_cols=210 Identities=14% Similarity=0.088 Sum_probs=150.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---cccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---KANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~vi 81 (327)
...++||||||+|+||+++++.|+++|++|++++|+.+.......... .++.++.+|+++.+++.++++ ++|+||
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~id~li 89 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK--DNYTIEVCNLANKEECSNLISKTSNLDILV 89 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHTCSCCSEEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc--cCccEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 456899999999999999999999999999999998665433322222 368889999999999998886 579999
Q ss_pred Eccccccc--------cCcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHH
Q 047628 82 NLIGREYE--------TRNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVL 147 (327)
Q Consensus 82 ~~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~ 147 (327)
|+||.... ......+++|+.++.++++++. +.+ ..+||++||.......+ ..|+.+|.+.+.+.+
T Consensus 90 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~ 168 (249)
T 3f9i_A 90 CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCASKAGLIGMTK 168 (249)
T ss_dssp ECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCCCCchhHHHHHHHHHHHH
Confidence 99997532 1224678899999999988764 344 56999999987765444 789999999988876
Q ss_pred hh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCce
Q 047628 148 RE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKI 218 (327)
Q Consensus 148 ~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~ 218 (327)
.. ++++.+++||.+.++.... ........... . ....+.+.+|+|++++.++..+.. ..|+.
T Consensus 169 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~dva~~~~~l~s~~~~~~tG~~ 239 (249)
T 3f9i_A 169 SLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQK--I-------PLGTYGIPEDVAYAVAFLASNNASYITGQT 239 (249)
T ss_dssp HHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHH--C-------TTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhc--C-------CCCCCcCHHHHHHHHHHHcCCccCCccCcE
Confidence 53 4889999999998663221 11111111111 1 123567889999999999986542 26899
Q ss_pred EEecCCcc
Q 047628 219 YELGGPDI 226 (327)
Q Consensus 219 ~~v~~~~~ 226 (327)
+++.++..
T Consensus 240 ~~vdgG~~ 247 (249)
T 3f9i_A 240 LHVNGGML 247 (249)
T ss_dssp EEESTTSS
T ss_pred EEECCCEe
Confidence 99998754
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-21 Score=166.28 Aligned_cols=211 Identities=13% Similarity=0.018 Sum_probs=150.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|+++++++.++++ ++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG--GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 556899999999999999999999999999999998654332222222 357889999999999888776 68
Q ss_pred cEEEEcccccccc-----C---cchhHhhhhHHHHH----HHHHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----R---NYSFEDVNHFMAER----IAGIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~----l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... + ....+++|+.++.. +++.+++.+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 159 (254)
T 1hdc_A 81 DGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVR 159 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCchhHHHHHHHHH
Confidence 9999999974321 1 13467889888874 455556666 67999999987654333 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecce-eHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPV-YVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++.+++||.+.++. ...+ . ...............+. +.+|+|++++.++..+.. .
T Consensus 160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~---~~~~----~-~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~ 231 (254)
T 1hdc_A 160 GLSKLAAVELGTDRIRVNSVHPGMTYTPM---TAET----G-IRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231 (254)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHH---HHHH----T-CCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHhhhcCeEEEEEecccCcCcc---cccc----c-hhHHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence 887653 4889999999998542 1111 1 11000000111112356 899999999999876432 2
Q ss_pred CCceEEecCCcc
Q 047628 215 MGKIYELGGPDI 226 (327)
Q Consensus 215 ~~~~~~v~~~~~ 226 (327)
.|+.+++.++..
T Consensus 232 tG~~~~vdgG~~ 243 (254)
T 1hdc_A 232 TGAELAVDGGWT 243 (254)
T ss_dssp CSCEEEESTTTT
T ss_pred CCCEEEECCCcc
Confidence 689999998754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=4.9e-22 Score=170.74 Aligned_cols=212 Identities=14% Similarity=0.124 Sum_probs=152.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC-CCCCchhhhcccCC--CCCeeEEeeCCCCh----hHHHHHhc--
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMGD--LGQIVPMKFNPRDD----NTIKATMA-- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~----~~~~~~~~-- 75 (327)
|+.+++|||||+|+||++++++|+++|++|++++| +.+........... ..++.++.+|++++ +++.++++
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHH
Confidence 44578999999999999999999999999999999 54432221111100 13688999999999 88877765
Q ss_pred -----cccEEEEcccccccc-------------------CcchhHhhhhHHHHHHHHHHHHc---CCc------ceEEEE
Q 047628 76 -----KANVVINLIGREYET-------------------RNYSFEDVNHFMAERIAGIAKEH---GGI------MRFIQI 122 (327)
Q Consensus 76 -----~~d~vi~~a~~~~~~-------------------~~~~~~~~n~~~~~~l~~a~~~~---~~v------~~~v~~ 122 (327)
++|+|||+||..... .-...+++|+.++.++++++... + . .+||++
T Consensus 89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~~~~~g~iv~i 167 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEG-GAWRSRNLSVVNL 167 (276)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEEEEEE
T ss_pred HHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcC-CCCCCCCcEEEEE
Confidence 689999999974321 11246789999999999998774 3 3 699999
Q ss_pred eccCCCCCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceec
Q 047628 123 SCLGASSSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQ 193 (327)
Q Consensus 123 Ss~~v~~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (327)
||.......+ ..|+.+|.+.+.+.+.. ++++.+++||.+.++ ......+....... .+. .+.
T Consensus 168 sS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~~~~--~p~------~r~ 238 (276)
T 1mxh_A 168 CDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEYRRK--VPL------GQS 238 (276)
T ss_dssp CCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHHHTT--CTT------TSC
T ss_pred CchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHHHhc--CCC------CCC
Confidence 9987654433 68999999999887653 589999999999987 32222222222211 111 112
Q ss_pred ceeHHHHHHHHHHHhhcCCC-CCCceEEecCCcc
Q 047628 194 PVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
+.+.+|+|++++.++..... ..|+.+++.++..
T Consensus 239 ~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272 (276)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence 78899999999999875432 2588999998753
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=169.65 Aligned_cols=223 Identities=14% Similarity=0.074 Sum_probs=154.1
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
.++.+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3556899999999999999999999999999999998655332222111 12468899999999999887775
Q ss_pred cccEEEEccccccccC---------cchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 76 KANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
.+|++||+||...... ....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|.+.
T Consensus 88 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 167 (264)
T 3ucx_A 88 RVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSAL 167 (264)
T ss_dssp CCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHHHHHH
Confidence 5799999998642211 13467889999999998865321 014899999987654444 6899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHh--hcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVK--KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++.+++||.+.++.... ......... ................+.+.+|+|++++.++....
T Consensus 168 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 247 (264)
T 3ucx_A 168 LAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMASDLA 247 (264)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHcCccc
Confidence 9887653 5999999999998652211 110000000 00000011112223457789999999999987643
Q ss_pred C-CCCceEEecCCcc
Q 047628 213 T-SMGKIYELGGPDI 226 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~ 226 (327)
. ..|+++++.++..
T Consensus 248 ~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 248 SGITGQALDVNCGEY 262 (264)
T ss_dssp TTCCSCEEEESTTSS
T ss_pred cCCCCCEEEECCCcc
Confidence 2 2689999999764
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.88 E-value=1.3e-21 Score=166.93 Aligned_cols=208 Identities=18% Similarity=0.117 Sum_probs=150.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.. .++.++.+|+++++++.++++ ++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE----------AKYDHIECDVTNPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS----------CSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC----------CceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5568999999999999999999999999999999987551 357889999999999888775 58
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... .....+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 154 (264)
T 2dtx_A 76 SVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVI 154 (264)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCCCCchhHHHHHHHHH
Confidence 9999999974321 1135778999998888888754 34 57999999987764443 78999999999
Q ss_pred HHHHhhC------CCeEEEecCeeecCCChhHHHHHHHHhh-c-----CceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 144 EAVLREL------PWATIMRPAAMIGTEDRLLNKWAQFVKK-F-----NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 144 ~~~~~~~------~~~~i~r~~~~~G~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+... +++.+++||.+.++ ....+...... . ..............+++++|+|++++.++..+
T Consensus 155 ~~~~~la~e~~~~i~vn~v~PG~v~t~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~ 231 (264)
T 2dtx_A 155 GLTKSIALDYAPLLRCNAVCPATIDTP---LVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 231 (264)
T ss_dssp HHHHHHHHHHTTTSEEEEEEECSBCSH---HHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHhcCCcEEEEEEeCCCcCc---chhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence 8886542 78899999988643 21111100000 0 00000000011134789999999999998764
Q ss_pred CC-CCCceEEecCCcc
Q 047628 212 GT-SMGKIYELGGPDI 226 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~~ 226 (327)
.. ..|+.+++.++..
T Consensus 232 ~~~~tG~~i~vdGG~~ 247 (264)
T 2dtx_A 232 ASFITGTCLYVDGGLS 247 (264)
T ss_dssp GTTCCSCEEEESTTGG
T ss_pred hcCCCCcEEEECCCcc
Confidence 32 2688999998753
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-22 Score=171.24 Aligned_cols=221 Identities=13% Similarity=0.051 Sum_probs=155.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc--------hhh-------hcccCCCCCeeEEeeCCCChhH
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--------PRH-------LKLMGDLGQIVPMKFNPRDDNT 69 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--------~~~-------~~~~~~~~~v~~~~~Dl~~~~~ 69 (327)
+..+++|||||+|+||++++++|+++|++|++++|+.... ... +...+ .++.++.+|++|+++
T Consensus 8 l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 8 FEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTG--RRCISAKVDVKDRAA 85 (281)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 4468999999999999999999999999999999974321 111 11112 468899999999999
Q ss_pred HHHHhc-------cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC
Q 047628 70 IKATMA-------KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS 130 (327)
Q Consensus 70 ~~~~~~-------~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~ 130 (327)
+.++++ ++|++||+||..... + -...+++|+.++.++++++ ++.+ ..++|++||......
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~ 164 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSA 164 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCC
Confidence 888775 689999999975321 1 1346789999999999986 3444 569999999876544
Q ss_pred CC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHH---HHHHHHhhcC----ceeeecCCCceecc
Q 047628 131 SP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLN---KWAQFVKKFN----FFPLFGDGSTRIQP 194 (327)
Q Consensus 131 ~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~ 194 (327)
.+ ..|+.+|.+.+.+.+.. ++++.+++||.+.++...... .+........ ...+.........+
T Consensus 165 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (281)
T 3s55_A 165 NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244 (281)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSSCSC
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccCcCC
Confidence 33 78999999999887653 589999999999987432110 0000000000 00000011222567
Q ss_pred eeHHHHHHHHHHHhhcCCC-CCCceEEecCCcccc
Q 047628 195 VYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 195 i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
.+.+|+|++++.++..... ..|+++++.++...+
T Consensus 245 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred CCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 8999999999999986543 268999999987654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.7e-22 Score=169.56 Aligned_cols=214 Identities=17% Similarity=0.110 Sum_probs=155.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++++++++||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567899999999999999999999999999999998755332222110 11468999999999999888775
Q ss_pred cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHH
Q 047628 76 KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~ 141 (327)
.+|+|||+||..... .....+++|+.++.++++++.. .+ ..++|++||....... ...|+.+|.+
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (247)
T 3lyl_A 82 AIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAKAG 160 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCcHHHHHHHHH
Confidence 369999999975321 1135778999999998887643 34 4699999997654333 3789999998
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.+.. ++++.+++||.+..+....+ ........ .......+.+++|+|++++.++.....
T Consensus 161 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~---------~~~~~~~~~~~~dva~~i~~l~s~~~~ 231 (247)
T 3lyl_A 161 VIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIA---------TKIPSGQIGEPKDIAAAVAFLASEEAK 231 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHH---------TTSTTCCCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHh---------hcCCCCCCcCHHHHHHHHHHHhCCCcC
Confidence 88887643 48999999999987643221 22222121 111224578899999999999876432
Q ss_pred -CCCceEEecCCccc
Q 047628 214 -SMGKIYELGGPDIF 227 (327)
Q Consensus 214 -~~~~~~~v~~~~~~ 227 (327)
..|+++++.++..+
T Consensus 232 ~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 232 YITGQTLHVNGGMYM 246 (247)
T ss_dssp TCCSCEEEESTTSSC
T ss_pred CccCCEEEECCCEec
Confidence 26899999987654
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.6e-21 Score=163.33 Aligned_cols=207 Identities=12% Similarity=0.001 Sum_probs=151.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh---ccccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM---AKANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~---~~~d~vi 81 (327)
++.++++||||+|+||++++++|+++|++|++++|+.++.... ... .++.++.+|+++++++.+++ .++|+||
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~---~~~~~~~~D~~~~~~~~~~~~~~~~id~lv 79 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL-EKY---PGIQTRVLDVTKKKQIDQFANEVERLDVLF 79 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG-GGS---TTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-Hhc---cCceEEEeeCCCHHHHHHHHHHhCCCCEEE
Confidence 5568999999999999999999999999999999986443221 121 26889999999999888665 3589999
Q ss_pred Ecccccccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC---CCchHHHhHHHHHHHH
Q 047628 82 NLIGREYET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS---SPSRVFSTKAAAEEAV 146 (327)
Q Consensus 82 ~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~---~~~~y~~~K~~~E~~~ 146 (327)
|+||..... . -...+++|+.++.++++++. +.+ ..++|++||...... ....|+.+|.+.|.+.
T Consensus 80 ~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~ 158 (246)
T 2ag5_A 80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLT 158 (246)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHH
T ss_pred ECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCCCCCccHHHHHHHHHHHH
Confidence 999975321 1 13466889999999888865 345 579999999866533 2368999999999888
Q ss_pred Hhh-------CCCeEEEecCeeecCCChh-H------HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDRL-L------NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.. ++++.++|||.++++.... + .......... .+ ...+.+.+|+|++++.++..+.
T Consensus 159 ~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dvA~~v~~l~s~~~ 229 (246)
T 2ag5_A 159 KSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR--QK-------TGRFATAEEIAMLCVYLASDES 229 (246)
T ss_dssp HHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT--CT-------TSSCEEHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhc--CC-------CCCCCCHHHHHHHHHHHhCccc
Confidence 764 5899999999998753111 1 1111111111 11 1246889999999999987643
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|+.+++.++.
T Consensus 230 ~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 230 AYVTGNPVIIDGGW 243 (246)
T ss_dssp TTCCSCEEEECTTG
T ss_pred cCCCCCEEEECCCc
Confidence 2 268999999874
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-21 Score=165.43 Aligned_cols=216 Identities=13% Similarity=0.071 Sum_probs=156.0
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
..++.+++|||||+|.||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++
T Consensus 2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34667899999999999999999999999999999998765433222221 11468899999999998887775
Q ss_pred -cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH-----HHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA-----KEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~-----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|++||+||...... -...+++|+.++.++.+++ ++.+ ..++|++||.......+ ..|+.+|
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 160 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-KGNIINMVATYAWDAGPGVIHSAAAK 160 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-CcEEEEECchhhccCCCCcHHHHHHH
Confidence 5799999999643211 1346789999999999887 3333 46899999976654443 6899999
Q ss_pred HHHHHHHHh--------hCCCeEEEecCeeecCCChhH----HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 140 AAAEEAVLR--------ELPWATIMRPAAMIGTEDRLL----NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 140 ~~~E~~~~~--------~~~~~~i~r~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
.+.+.+.+. .++++.+++||.+.++..... ..+...... .. ....+.+.+|+|++++.+
T Consensus 161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~--~~-------p~~r~~~pedvA~~v~~L 231 (257)
T 3imf_A 161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQ--SV-------PLGRLGTPEEIAGLAYYL 231 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHT--TS-------TTCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHh--cC-------CCCCCcCHHHHHHHHHHH
Confidence 998877643 369999999999987642110 000111111 11 123467899999999999
Q ss_pred hhcCCC-CCCceEEecCCcccc
Q 047628 208 LKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~~~s 228 (327)
+..... ..|+++++.++..++
T Consensus 232 ~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 232 CSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp HSGGGTTCCSCEEEESTTTTSC
T ss_pred cCchhcCccCCEEEECCCcccC
Confidence 976542 268999999987654
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=9.3e-22 Score=172.40 Aligned_cols=227 Identities=16% Similarity=0.147 Sum_probs=146.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC-chhhhccc-----CCCCCeeEEeeCCCChhHHHHHhc--
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLM-----GDLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~-----~~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
.|+++++|||||+|+||++++++|+++|++|++.+|+... ....+... ....++.++.+|++|++++.++++
T Consensus 2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~ 81 (324)
T 3u9l_A 2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI 81 (324)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence 3456799999999999999999999999999999997432 12111110 011468999999999999988876
Q ss_pred -----cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCC-CCC--chH
Q 047628 76 -----KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASS-SSP--SRV 135 (327)
Q Consensus 76 -----~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~-~~~--~~y 135 (327)
++|+|||+||..... + -...+++|+.++.++++++ ++.+ ..++|++||..... ..+ ..|
T Consensus 82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~~~~~Y 160 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPPYLAPY 160 (324)
T ss_dssp HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCSSCHHH
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCCcchhH
Confidence 689999999974321 1 1346799999999999988 5556 67999999987652 223 679
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChh--------HHHHHHHHhhcCceeeecCCC-----ceecce
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL--------LNKWAQFVKKFNFFPLFGDGS-----TRIQPV 195 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~-----~~~~~i 195 (327)
+.+|.++|.+.+.. ++++++++||.+.++...+ ...... ....+....+..-. ...+..
T Consensus 161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 239 (324)
T 3u9l_A 161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAE-YEAGPNAGLGEEIKKAFAAIVPPDA 239 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHH-HHHTTTTTHHHHHHHHHHHTSCTTC
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHh-hccccccCCHHHHHHHHHHhcCCCC
Confidence 99999999887653 5899999999997542111 111100 00000000000000 001225
Q ss_pred eHHHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHH
Q 047628 196 YVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELA 233 (327)
Q Consensus 196 ~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~ 233 (327)
+.+|+|++++.++..+.......+.++ +.......+.
T Consensus 240 ~p~~vA~aiv~~~~~~~~~~~~~~~~g-p~~~~~~~~~ 276 (324)
T 3u9l_A 240 DVSLVADAIVRVVGTASGKRPFRVHVD-PAEDGADVGF 276 (324)
T ss_dssp CTHHHHHHHHHHHTSCTTCCCSEEEEC-TTCCSHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCCCeEEEeC-CcchHHHHHH
Confidence 789999999999998753123345454 3444543333
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.6e-22 Score=168.80 Aligned_cols=216 Identities=17% Similarity=0.045 Sum_probs=158.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+..++++||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|++|++++.++++ ++
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG--PRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 446899999999999999999999999999999998655433222222 368899999999998876664 57
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
|++||+||...... ....+++|+.++.++.+++...- +-.++|++||.......| ..|+.+|.+.+.+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~ 163 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFA 163 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHH
Confidence 99999999753211 13468899999999999987641 024899999987765444 78999999999887
Q ss_pred Hhh-------CCCeEEEecCeeecCCCh---h----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDR---L----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.. ++++..++||.+..+... . ...+....... .+ ...+.+.+|+|++++.++....
T Consensus 164 ~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~pedvA~~v~~L~s~~~ 234 (255)
T 4eso_A 164 SVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNI--TP-------MKRNGTADEVARAVLFLAFEAT 234 (255)
T ss_dssp HHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHH--ST-------TSSCBCHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhcc--CC-------CCCCcCHHHHHHHHHHHcCcCc
Confidence 653 599999999999876321 1 11111111111 11 1245678999999999887633
Q ss_pred CCCCceEEecCCccccHHH
Q 047628 213 TSMGKIYELGGPDIFTVHE 231 (327)
Q Consensus 213 ~~~~~~~~v~~~~~~s~~e 231 (327)
...|+++++.++...++.+
T Consensus 235 ~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 235 FTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp TCCSCEEEESTTTTTTBCC
T ss_pred CccCCEEEECCCccccCcC
Confidence 2368999999987766543
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=169.62 Aligned_cols=209 Identities=14% Similarity=0.052 Sum_probs=145.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhhhcccC-CCCCeeE-EeeCCCChhHHHHHhc-------c
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLMG-DLGQIVP-MKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~-~~~~v~~-~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++|+||||+|+||++++++|+++|++|+++ .|+.++......... ...++.. +.+|+++++++.++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 3689999999999999999999999999998 777544322111110 0134666 8999999998887764 6
Q ss_pred ccEEEEcccccccc--------CcchhHhhhhHHHHHH----HHHHHHcCCcceEEEEeccCCC-CC-CCchHHHhHHHH
Q 047628 77 ANVVINLIGREYET--------RNYSFEDVNHFMAERI----AGIAKEHGGIMRFIQISCLGAS-SS-SPSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l----~~a~~~~~~v~~~v~~Ss~~v~-~~-~~~~y~~~K~~~ 142 (327)
+|+|||+||..... .....+++|+.++.++ ++.+++.+ ..+||++||.... .. ....|+.+|.+.
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 159 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNPGQANYVASKAGL 159 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence 89999999975321 1135678899985554 45555666 7899999997543 22 237899999998
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
|.+.+.. +++++++||+.++++.... ...+....... .+ ...+++++|+|++++.++..+..
T Consensus 160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dva~~~~~l~~~~~~~ 230 (245)
T 2ph3_A 160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQ--IP-------AGRFGRPEEVAEAVAFLVSEKAGY 230 (245)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHT--CT-------TCSCBCHHHHHHHHHHHTSGGGTT
T ss_pred HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHhCccccc
Confidence 8887653 5899999999998652111 11111111111 11 13578999999999999976432
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..|+.|++.++.
T Consensus 231 ~~G~~~~v~gg~ 242 (245)
T 2ph3_A 231 ITGQTLCVDGGL 242 (245)
T ss_dssp CCSCEEEESTTC
T ss_pred ccCCEEEECCCC
Confidence 258899998864
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.88 E-value=2e-21 Score=166.71 Aligned_cols=213 Identities=15% Similarity=0.128 Sum_probs=151.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|+||++++++|+++|++|++++|+.+.............++.++.+|++|++++.++++ ++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 34578999999999999999999999999999999865433222222211268889999999998887775 58
Q ss_pred cEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCc----ceEEEEeccCCCCCCC--c-hHHHh
Q 047628 78 NVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGI----MRFIQISCLGASSSSP--S-RVFST 138 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v----~~~v~~Ss~~v~~~~~--~-~y~~~ 138 (327)
|+|||+||..... .. ...+++|+.++.++++++. +.+ . .+||++||.......+ . .|+.+
T Consensus 107 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~~~~~~~Y~as 185 (276)
T 2b4q_A 107 DILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAMGEQAYAYGPS 185 (276)
T ss_dssp SEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCCCCSCTTHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCCCCCccccHHH
Confidence 9999999974321 11 3577889999987777654 344 3 7999999987654333 4 89999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
|.+++.+.+.. ++++.+++||.+..+..... .............+ ...+.+.+|+|++++.++..
T Consensus 186 K~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p-------~~r~~~p~dvA~~v~~l~s~ 258 (276)
T 2b4q_A 186 KAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIP-------MGRWGRPEEMAALAISLAGT 258 (276)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTST-------TSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCC-------CCCcCCHHHHHHHHHHHhCc
Confidence 99999887653 58999999999986543211 11111111100111 12467899999999999976
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
+.. ..|+++++.++.
T Consensus 259 ~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 259 AGAYMTGNVIPIDGGF 274 (276)
T ss_dssp GGTTCCSCEEEESTTT
T ss_pred cccCCCCCEEEeCCCc
Confidence 432 268999998874
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.9e-22 Score=169.08 Aligned_cols=209 Identities=16% Similarity=0.108 Sum_probs=147.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||+|+||+++++.|+++|++|++++|+.+.........+ .++.++.+|++|++++.++++ ++
T Consensus 25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (266)
T 3grp_A 25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG--KDVFVFSANLSDRKSIKQLAEVAEREMEGI 102 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--SSEEEEECCTTSHHHHHHHHHHHHHHHTSC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEeecCCHHHHHHHHHHHHHHcCCC
Confidence 346799999999999999999999999999999998665433333333 468999999999998887775 58
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... .....+++|+.++.++.+++ ++.+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 181 (266)
T 3grp_A 103 DILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNYCAAKAGLI 181 (266)
T ss_dssp CEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------CHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCCCchhHHHHHHHHH
Confidence 9999999975321 11356789999966666654 4455 57999999976654443 78999999988
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++.+++||.+.++... ............ . ....+.+.+|+|++++.++..... .
T Consensus 182 ~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~--~-------p~~r~~~~edvA~~v~~L~s~~~~~i 252 (266)
T 3grp_A 182 GFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAM--I-------PMKRMGIGEEIAFATVYLASDEAAYL 252 (266)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTT--C-------TTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhc--C-------CCCCCcCHHHHHHHHHHHhCccccCc
Confidence 877653 489999999999754211 111111112111 1 123467789999999999876532 2
Q ss_pred CCceEEecCCc
Q 047628 215 MGKIYELGGPD 225 (327)
Q Consensus 215 ~~~~~~v~~~~ 225 (327)
.|+++++.++.
T Consensus 253 tG~~i~vdGG~ 263 (266)
T 3grp_A 253 TGQTLHINGGM 263 (266)
T ss_dssp CSCEEEESTTC
T ss_pred cCCEEEECCCe
Confidence 68999999874
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-21 Score=164.66 Aligned_cols=210 Identities=19% Similarity=0.091 Sum_probs=151.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+... ....+.+|+++.+++.++++ ++
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 95 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------ADLHLPGDLREAAYADGLPGAVAAGLGRL 95 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------CSEECCCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------hhhccCcCCCCHHHHHHHHHHHHHhcCCC
Confidence 34578999999999999999999999999999999876532 12445899999988776654 58
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||...... -...+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+|.+++
T Consensus 96 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 174 (266)
T 3uxy_A 96 DIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYCLTKAALA 174 (266)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCChHHHHHHHHHH
Confidence 99999999854211 1346779999999999987 4555 57999999987764444 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhc--CceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKF--NFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.+.. ++++.+++||.+.++. ........... ..............+.+.+|+|++++.++.....
T Consensus 175 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~ 251 (266)
T 3uxy_A 175 SLTQCMGMDHAPQGIRINAVCPNEVNTPM---LRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAARY 251 (266)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCCHH---HHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHhhhcCcEEEEEeeCCCcchH---hhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 887653 5899999999997542 11111000000 0000111122234567899999999999986542
Q ss_pred CCCceEEecCCcccc
Q 047628 214 SMGKIYELGGPDIFT 228 (327)
Q Consensus 214 ~~~~~~~v~~~~~~s 228 (327)
..|+++++.++..++
T Consensus 252 itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 252 LCGSLVEVNGGKAVA 266 (266)
T ss_dssp CCSCEEEESTTCCCC
T ss_pred CcCCEEEECcCEeCC
Confidence 268999999987654
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-21 Score=165.46 Aligned_cols=212 Identities=17% Similarity=0.080 Sum_probs=150.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHh--------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATM--------A 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~--------~ 75 (327)
+..++++||||+|+||++++++|+++|++|++++|+.+.......... ...++..+.+|+++++++.+++ .
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 446789999999999999999999999999999998654322221110 1146889999999999888776 3
Q ss_pred cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|++||+||..... . -...+++|+.++.++++++. +.+ ..++|++||...+...+ ..|+.+|.+
T Consensus 99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a 177 (273)
T 1ae1_A 99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASKGA 177 (273)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCCCcchhHHHHHH
Confidence 589999999974321 1 13466789999999988873 445 57999999987765444 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChh-HH------HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRL-LN------KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
.+.+.+.. ++++.+++||.+.++.... .. .+....... .+ ...+.+.+|+|++++.+
T Consensus 178 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~dvA~~v~~l 248 (273)
T 1ae1_A 178 INQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK--TP-------MGRAGKPQEVSALIAFL 248 (273)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHH--ST-------TCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHH
Confidence 99887653 5999999999998763211 11 111111111 11 12467889999999998
Q ss_pred hhcCCC-CCCceEEecCCcc
Q 047628 208 LKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~~ 226 (327)
+..... ..|+++++.++..
T Consensus 249 ~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 249 CFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp HSGGGTTCCSCEEEESTTGG
T ss_pred hCccccCcCCCEEEECCCcc
Confidence 875432 2689999998754
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=8.1e-22 Score=168.34 Aligned_cols=214 Identities=15% Similarity=0.154 Sum_probs=154.2
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.+++|||||+ |+||++++++|+++|++|++++|+. .....+.... ..+...++.+|+++++++.++++
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 345789999999 9999999999999999999999987 3222222110 00235788999999999888775
Q ss_pred -cccEEEEccccccc----------cC---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 -KANVVINLIGREYE----------TR---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 -~~d~vi~~a~~~~~----------~~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
++|+|||+||.... .. ....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+
T Consensus 86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 165 (265)
T 1qsg_A 86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA 165 (265)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHH
Confidence 57999999997532 11 13477899999999999997752 014899999976654333 689999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
|.+.+.+.+.. ++++.+++||.+.++.... ...+........ ++ ..+.+.+|+|++++.++
T Consensus 166 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--p~-------~~~~~~~dva~~v~~l~ 236 (265)
T 1qsg_A 166 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVT--PI-------RRTVTIEDVGNSAAFLC 236 (265)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHS--TT-------SSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcC--CC-------CCCCCHHHHHHHHHHHh
Confidence 99999888653 4899999999998874321 122222222111 11 23578899999999998
Q ss_pred hcCCC-CCCceEEecCCcccc
Q 047628 209 KDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~~s 228 (327)
..... ..|++|++.++..++
T Consensus 237 s~~~~~~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 237 SDLSAGISGEVVHVDGGFSIA 257 (265)
T ss_dssp SGGGTTCCSCEEEESTTGGGB
T ss_pred CchhcCccCCEEEECCCcCCC
Confidence 75432 258899999986554
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.7e-21 Score=164.30 Aligned_cols=212 Identities=17% Similarity=0.143 Sum_probs=152.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+......... ....++.++.+|+++++++.++++
T Consensus 19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (267)
T 1vl8_A 19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG 98 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999999865432222111 001357889999999998887775
Q ss_pred cccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccC-CCCCCC--chHHHhHH
Q 047628 76 KANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLG-ASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~-v~~~~~--~~y~~~K~ 140 (327)
++|+|||+||..... .. ...+++|+.++.++++++. +.+ ..++|++||.. .....+ ..|+.+|.
T Consensus 99 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK~ 177 (267)
T 1vl8_A 99 KLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAASKG 177 (267)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCCCCChhHHHHHH
Confidence 589999999975321 11 3467889999999988774 344 57999999987 433222 68999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+++.+.+.. ++++.+++||.+..+..... .......... .+ ...+.+.+|+|++++.++..
T Consensus 178 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~~~~~p~dvA~~v~~l~s~ 248 (267)
T 1vl8_A 178 GVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKR--IP-------LGRTGVPEDLKGVAVFLASE 248 (267)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHT--CT-------TSSCBCGGGGHHHHHHHHSG
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhh--CC-------CCCCcCHHHHHHHHHHHcCc
Confidence 999887653 59999999999976532211 1111111111 11 12467889999999999876
Q ss_pred CC-CCCCceEEecCCcc
Q 047628 211 DG-TSMGKIYELGGPDI 226 (327)
Q Consensus 211 ~~-~~~~~~~~v~~~~~ 226 (327)
.. ...|+.+.+.++..
T Consensus 249 ~~~~itG~~i~vdGG~~ 265 (267)
T 1vl8_A 249 EAKYVTGQIIFVDGGWT 265 (267)
T ss_dssp GGTTCCSCEEEESTTGG
T ss_pred cccCCcCCeEEECCCCC
Confidence 43 22688999998743
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.8e-21 Score=165.57 Aligned_cols=213 Identities=15% Similarity=0.090 Sum_probs=153.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------~~ 77 (327)
++.+++|||||+|+||++++++|+++|++|++++|.... ....... ....++.++.+|++|++++.++.+ ++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGV-KEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRV 107 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHH-HHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCC
Confidence 446899999999999999999999999999999976422 1111111 112468899999999988876653 58
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||...... -...+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 108 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaa~~ 186 (273)
T 3uf0_A 108 DVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASKHAVV 186 (273)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSCHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCCCChhHHHHHHHHH
Confidence 99999999754321 1357789999999998876 3445 57999999987764444 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++.+++||.+.++..... .......... .+ ...+.+.+|+|++++.++.....
T Consensus 187 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~pedva~~v~~L~s~~a~ 257 (273)
T 3uf0_A 187 GLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITAR--IP-------AGRWATPEDMVGPAVFLASDAAS 257 (273)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHH--ST-------TSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhc--CC-------CCCCCCHHHHHHHHHHHhCchhc
Confidence 887653 48999999999987643221 1111111111 11 12457789999999999876432
Q ss_pred -CCCceEEecCCcccc
Q 047628 214 -SMGKIYELGGPDIFT 228 (327)
Q Consensus 214 -~~~~~~~v~~~~~~s 228 (327)
..|+++++.++...|
T Consensus 258 ~itG~~i~vdGG~~~s 273 (273)
T 3uf0_A 258 YVHGQVLAVDGGWLAS 273 (273)
T ss_dssp TCCSCEEEESTTGGGC
T ss_pred CCcCCEEEECcCccCC
Confidence 268999999986543
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=163.78 Aligned_cols=185 Identities=14% Similarity=-0.001 Sum_probs=132.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
++++|+||||+|+||++++++|+++|++|++++|+.+......... .++.++.+|+++++++.++++ ++|
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL---EGALPLPGDVREEGDWARAVAAMEEAFGELS 80 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---hhceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4578999999999999999999999999999999865432222222 257889999999998887765 579
Q ss_pred EEEEcccccccc--------CcchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYET--------RNYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|||+||..... .....+++|+.++.+++++ +++.+ ..+||++||...+...+ ..|+.+|.+.+.
T Consensus 81 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 159 (234)
T 2ehd_A 81 ALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLG 159 (234)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCCCCchhhHHHHHHHH
Confidence 999999964321 1134678899888755554 45556 78999999987765433 689999998888
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.. +++++++|||.+..+.... .. .. +.+++.+|+|++++.++..+..
T Consensus 160 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~--~~----------~~~~~~~dvA~~~~~l~~~~~~ 216 (234)
T 2ehd_A 160 LAGAAMLDLREANVRVVNVLPGSVDTGFAGN-------TP--GQ----------AWKLKPEDVAQAVLFALEMPGH 216 (234)
T ss_dssp HHHHHHHHHGGGTEEEEEEECC-----------------------------------CCHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCCcCCcccc-------cc--cc----------cCCCCHHHHHHHHHHHhCCCcc
Confidence 76543 5899999999886432110 00 00 1157899999999999987653
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=165.65 Aligned_cols=213 Identities=15% Similarity=0.054 Sum_probs=150.7
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK------ 76 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~------ 76 (327)
..++.+++|||||+|+||++++++|+++|++|++++|+.++........+ .++.++++|++|++++.++++.
T Consensus 2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHDVSSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34667899999999999999999999999999999998654332222222 3688999999999988877754
Q ss_pred -ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 77 -ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 77 -~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
+|+|||+||..... . ....+++|+.++..+.+++ ++.+ .++|++||.......+ ..|+.+|.+
T Consensus 80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sK~a 157 (253)
T 1hxh_A 80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAA 157 (253)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCCCCccHHHHHHH
Confidence 69999999975321 1 1346788888776666654 3443 6999999987765444 689999999
Q ss_pred HHHHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceee-ecC---CCceecceeHHHHHHHHHHHh
Q 047628 142 AEEAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPL-FGD---GSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 142 ~E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~i~~~D~a~~~~~~l 208 (327)
.|.+.+.. ++++.++|||.++++.. ... .. ...... ... ......+.+.+|+|++++.++
T Consensus 158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~---~~~---~~-~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~ 230 (253)
T 1hxh_A 158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMM---QAS---LP-KGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLA 230 (253)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHH---HHH---SC-TTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchh---hhc---cc-hhhhHHHHhhhhccCccCCCCCHHHHHHHHHHHc
Confidence 99887653 78999999999986421 110 00 000000 000 111134688999999999999
Q ss_pred hcCCC-CCCceEEecCCcc
Q 047628 209 KDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~ 226 (327)
..+.. ..|+.+++.++..
T Consensus 231 s~~~~~~tG~~~~vdgG~~ 249 (253)
T 1hxh_A 231 SDESSVMSGSELHADNSIL 249 (253)
T ss_dssp SGGGTTCCSCEEEESSSCT
T ss_pred CccccCCCCcEEEECCCcc
Confidence 76532 2688999998743
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.1e-21 Score=168.53 Aligned_cols=215 Identities=16% Similarity=0.052 Sum_probs=157.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+..+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++ +
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999999999998765333222221 12468899999999998887775 5
Q ss_pred ccEEEEcccccccc------C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCC-CCC--CchHHHhHH
Q 047628 77 ANVVINLIGREYET------R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGAS-SSS--PSRVFSTKA 140 (327)
Q Consensus 77 ~d~vi~~a~~~~~~------~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~-~~~--~~~y~~~K~ 140 (327)
+|++||+||..... + ....+++|+.++.++.+++.. .+ -.++|++||.... ... ...|+.+|.
T Consensus 86 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asKa 164 (280)
T 3tox_A 86 LDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYAASKA 164 (280)
T ss_dssp CCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCCCCchhHHHHHH
Confidence 89999999964221 1 135778999999999888753 33 4599999997765 222 378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChh-----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRL-----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
+.+.+.+.. ++++.+++||.+.++.... .+......... . ....+.+.+|+|++++.++
T Consensus 165 a~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~-------p~~r~~~pedvA~~v~~L~ 235 (280)
T 3tox_A 165 GLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGL--H-------ALKRIARPEEIAEAALYLA 235 (280)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTT--S-------TTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhcc--C-------ccCCCcCHHHHHHHHHHHh
Confidence 999887653 4899999999998764221 11122222211 1 1234678899999999999
Q ss_pred hcCCC-CCCceEEecCCccccH
Q 047628 209 KDDGT-SMGKIYELGGPDIFTV 229 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~~s~ 229 (327)
..... ..|+++++.++..++.
T Consensus 236 s~~a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 236 SDGASFVTGAALLADGGASVTK 257 (280)
T ss_dssp SGGGTTCCSCEEEESTTGGGCC
T ss_pred CccccCCcCcEEEECCCccccc
Confidence 86532 2689999999876654
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.88 E-value=5e-22 Score=169.79 Aligned_cols=224 Identities=17% Similarity=0.104 Sum_probs=155.9
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhc--
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
|.+.++.+++|||||+|+||++++++|+++|++|++++|+.+....... .......+..+.+|+++++.+.++++
T Consensus 4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 83 (267)
T 3t4x_A 4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKY 83 (267)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHC
T ss_pred cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhc
Confidence 4455567899999999999999999999999999999998755332222 22212457889999999998888776
Q ss_pred -cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 -KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
++|++||+||...... . ...+++|+.++.++.+++ ++.+ ..++|++||.......+ ..|+.+|.
T Consensus 84 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa 162 (267)
T 3t4x_A 84 PKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQEMAHYSATKT 162 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCCcchHHHHHHH
Confidence 5899999999753221 1 235789999977776655 4455 57999999987764444 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCc----------eeeecCCCceecceeHHHHHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF----------FPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
+.+.+.+.. ++++..++||.+..+ ....+......... ..-.........+.+.+|+|++
T Consensus 163 a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~ 239 (267)
T 3t4x_A 163 MQLSLSRSLAELTTGTNVTVNTIMPGSTLTE---GVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAHL 239 (267)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEEEECCBCCH---HHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCCeecCc---cHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHHH
Confidence 999888764 378899999988743 11111111000000 0000000112357888999999
Q ss_pred HHHHhhcCCC-CCCceEEecCCcccc
Q 047628 204 VTAALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 204 ~~~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
++.++..... ..|+++++.++...+
T Consensus 240 v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 240 VTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred HHHHcCccccCccCCeEEECCCcccc
Confidence 9999875432 268999999986654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.3e-21 Score=165.04 Aligned_cols=207 Identities=15% Similarity=0.061 Sum_probs=151.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---cccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---KANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~vi 81 (327)
++.++++||||+|+||++++++|+++|++|++++|+.++........+ .++.++.+|++|++++.++++ ++|+||
T Consensus 14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv 91 (291)
T 3rd5_A 14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA--GQVEVRELDLQDLSSVRRFADGVSGADVLI 91 (291)
T ss_dssp CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSS--SEEEEEECCTTCHHHHHHHHHTCCCEEEEE
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--CCeeEEEcCCCCHHHHHHHHHhcCCCCEEE
Confidence 446899999999999999999999999999999998765444333332 468999999999999999887 469999
Q ss_pred Eccccccc------cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------C--chHHHhHH
Q 047628 82 NLIGREYE------TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------P--SRVFSTKA 140 (327)
Q Consensus 82 ~~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~--~~y~~~K~ 140 (327)
|+||.... ......+++|+.++.++++++.... .+++|++||....... + ..|+.+|.
T Consensus 92 ~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 170 (291)
T 3rd5_A 92 NNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKL 170 (291)
T ss_dssp ECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred ECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccccCCCCcchHHHHHH
Confidence 99997532 2235688999999999999999887 7899999997654221 1 57999999
Q ss_pred HHHHHHHhh-------C--CCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------L--PWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~--~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+.+.. + +++..++||.+..+..... ..+...... .+ ..+-..+.+|+|+.++.++..
T Consensus 171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~A~~~~~l~~~ 241 (291)
T 3rd5_A 171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMS---AA------TRVVATDADFGARQTLYAASQ 241 (291)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------CHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHHHHH---HH------HHHHhCCHHHHHHHHHHHHcC
Confidence 998887653 3 8889999999875532211 111111110 00 112234589999999999998
Q ss_pred CCCCCCceEEecCC
Q 047628 211 DGTSMGKIYELGGP 224 (327)
Q Consensus 211 ~~~~~~~~~~v~~~ 224 (327)
+.. .|+.+++.++
T Consensus 242 ~~~-~G~~~~vdgG 254 (291)
T 3rd5_A 242 DLP-GDSFVGPRFG 254 (291)
T ss_dssp CCC-TTCEEEETTS
T ss_pred CCC-CCceeCCccc
Confidence 655 7888888764
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-21 Score=165.82 Aligned_cols=212 Identities=16% Similarity=0.137 Sum_probs=151.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++.
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 456799999999999999999999999999999998765432211110 013588999999999998887764
Q ss_pred ccEEEEccccccc-c-----C----cchhHhhhhHH----HHHHHHHHHHcCCcceEEEEeccCCCCC--CC--chHHHh
Q 047628 77 ANVVINLIGREYE-T-----R----NYSFEDVNHFM----AERIAGIAKEHGGIMRFIQISCLGASSS--SP--SRVFST 138 (327)
Q Consensus 77 ~d~vi~~a~~~~~-~-----~----~~~~~~~n~~~----~~~l~~a~~~~~~v~~~v~~Ss~~v~~~--~~--~~y~~~ 138 (327)
+|+|||+||.... . . ....+++|+.+ ++++++.+++.+ ..+||++||...... .+ ..|+.+
T Consensus 112 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~Y~~s 190 (279)
T 3ctm_A 112 IDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAPYNTA 190 (279)
T ss_dssp CSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---CCHHHHHHH
T ss_pred CCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCCCCcccHHHH
Confidence 8999999997533 1 1 12467789888 567777777776 789999999876543 22 689999
Q ss_pred HHHHHHHHHhhC------CCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 139 KAAAEEAVLREL------PWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 139 K~~~E~~~~~~~------~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
|.+.|.+.+... .++.+++||.+.++.... ........... .+ ...+++.+|+|++++.++..+
T Consensus 191 K~a~~~~~~~la~e~~~~~~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~p-------~~~~~~~~dvA~~~~~l~s~~ 261 (279)
T 3ctm_A 191 KAACTHLAKSLAIEWAPFARVNTISPGYIDTDITDFASKDMKAKWWQL--TP-------LGREGLTQELVGGYLYLASNA 261 (279)
T ss_dssp HHHHHHHHHHHHHHTTTTCEEEEEEECSBSSTTTSSCCHHHHHHHHHH--ST-------TCSCBCGGGTHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhcccCCEEEEeccCCccccccccChHHHHHHHHh--CC-------ccCCcCHHHHHHHHHHHhCcc
Confidence 999999987642 178999999987663211 11111111111 11 124678899999999999764
Q ss_pred CC-CCCceEEecCCcc
Q 047628 212 GT-SMGKIYELGGPDI 226 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~~ 226 (327)
.. ..|+++++.++..
T Consensus 262 ~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 262 STFTTGSDVVIDGGYT 277 (279)
T ss_dssp GTTCCSCEEEESTTCC
T ss_pred ccCccCCEEEECCCee
Confidence 31 2688999998754
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.4e-21 Score=166.98 Aligned_cols=219 Identities=13% Similarity=0.053 Sum_probs=151.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc---cCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---MGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+++++++||||+|+||++++++|+++|++|++++|+.++....... .....++.++.+|+++++++.++++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4568999999999999999999999999999999986543222111 1001468899999999999888775
Q ss_pred -cccEEEEccccccc-c-----C---cchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYE-T-----R---NYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~-~-----~---~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|+|||+||.... . + -...+++|+.++..+.++ +++.+ ..++|++||.......+ ..|+.+|
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 169 (267)
T 1iy8_A 91 GRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAAK 169 (267)
T ss_dssp SCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCCCCccHHHHH
Confidence 57999999987432 1 1 134668888877765554 45555 67999999987654333 7899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCcee----eecCCCceecceeHHHHHHHHHHHh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFP----LFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+.+.+.+.. ++++.+++||.+.++. ....... ....... ..........+.+.+|+|++++.++
T Consensus 170 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~---~~~~~~~-~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~ 245 (267)
T 1iy8_A 170 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPM---VENSMKQ-LDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL 245 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHH---HHHHHHH-HCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcc---hhccccc-cChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHc
Confidence 9999887643 5999999999997542 1111000 0000000 0001111134678999999999998
Q ss_pred hcCCC-CCCceEEecCCcccc
Q 047628 209 KDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~~s 228 (327)
..+.. ..|+.+++.++..++
T Consensus 246 s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 246 SDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp SGGGTTCCSCEEEESTTTTTB
T ss_pred CccccCCCCCEEEECCCcccC
Confidence 76432 268999999876544
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=167.28 Aligned_cols=219 Identities=16% Similarity=0.171 Sum_probs=155.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc--------hhh-------hcccCCCCCeeEEeeCCCChhH
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--------PRH-------LKLMGDLGQIVPMKFNPRDDNT 69 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--------~~~-------~~~~~~~~~v~~~~~Dl~~~~~ 69 (327)
+..+++|||||+|+||++++++|+++|++|++++|+.... ... +...+ .++.++++|++|+++
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~ 88 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIG--SRIVARQADVRDRES 88 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHT--CCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcC--CeEEEEeCCCCCHHH
Confidence 4468999999999999999999999999999999873210 111 11112 468999999999999
Q ss_pred HHHHhc-------cccEEEEccccccccC----cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC---
Q 047628 70 IKATMA-------KANVVINLIGREYETR----NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--- 131 (327)
Q Consensus 70 ~~~~~~-------~~d~vi~~a~~~~~~~----~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--- 131 (327)
+.++++ ++|++||+||...... ....+++|+.++.++++++.. .+.-.++|++||.......
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 168 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSA 168 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCS
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccC
Confidence 988776 6899999999754322 245778999999999998643 2213589999997654332
Q ss_pred -C--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh--hHHHHH-HHHhhcCceeeecCCCceecceeHH
Q 047628 132 -P--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWA-QFVKKFNFFPLFGDGSTRIQPVYVV 198 (327)
Q Consensus 132 -~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 198 (327)
+ ..|+.+|.+.+.+.+.+ ++++.+++||.+.++... ....+. ............+.... ..+++.+
T Consensus 169 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~ 247 (278)
T 3sx2_A 169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-VEVLAPE 247 (278)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-CSSBCHH
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-cCcCCHH
Confidence 2 67999999999887653 489999999999877432 211222 11221222222223223 5788999
Q ss_pred HHHHHHHHHhhcCCC-CCCceEEecCCcc
Q 047628 199 DVAAAVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 199 D~a~~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
|+|++++.++..... ..|+++++.++..
T Consensus 248 dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 276 (278)
T 3sx2_A 248 DVANAVAWLVSDQARYITGVTLPVDAGFL 276 (278)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHhCcccccccCCEEeECCCcc
Confidence 999999999976432 2689999998743
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=166.53 Aligned_cols=213 Identities=12% Similarity=0.056 Sum_probs=150.8
Q ss_pred cCCcEEEEEcCCCc-cHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGF-LGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~-iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++++++|||||+|+ ||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 44679999999985 9999999999999999999998765433222221 11478999999999999887775
Q ss_pred -cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHc-----CCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH-----GGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~-----~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|+|||+||...... -...+++|+.++.++++++... + ..++|++||.......+ ..|+.+|
T Consensus 100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK 178 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDH-GGVIVNNASVLGWRAQHSQSHYAAAK 178 (266)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSC-CEEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CeEEEEeCCHHHcCCCCCCchHHHHH
Confidence 4699999999743211 1346788999999999987653 3 46899999976654433 7899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.+.+.+.. ++++.+++||.+..+...... ................+.+.+|+|++++.++....
T Consensus 179 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------~~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~ 251 (266)
T 3o38_A 179 AGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS-------SSELLDRLASDEAFGRAAEPWEVAATIAFLASDYS 251 (266)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------------CCTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC-------cHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence 9999887653 589999999998755211100 00111111112223456789999999999987643
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|+++++.++.
T Consensus 252 ~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 252 SYMTGEVVSVSSQR 265 (266)
T ss_dssp TTCCSCEEEESSCC
T ss_pred cCccCCEEEEcCCc
Confidence 2 268999999864
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.1e-22 Score=170.92 Aligned_cols=211 Identities=14% Similarity=0.037 Sum_probs=149.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++|+||||+|+||+++++.|+++|++|+++.|+.++......... ...++.++.+|++|++++.++++ +
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 445799999999999999999999999999998887654322221111 11468899999999999888774 5
Q ss_pred ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC--CCchHHHhHHHH
Q 047628 77 ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS--SPSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~ 142 (327)
+|+|||+||..... .....+++|+.++.++++++. +.+ ..+||++||...... ....|+.+|.+.
T Consensus 122 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~ 200 (285)
T 2c07_A 122 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKAGV 200 (285)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCCchHHHHHHHH
Confidence 89999999975321 113567889999777777664 455 679999999754322 237899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
|.+.+.. ++++++++||.+.++.... ...+...... ..+ ...+++.+|+|++++.++..+..
T Consensus 201 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~dvA~~~~~l~~~~~~~ 271 (285)
T 2c07_A 201 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIIS--NIP-------AGRMGTPEEVANLACFLSSDKSGY 271 (285)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHT--TCT-------TSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHh--hCC-------CCCCCCHHHHHHHHHHHhCCCcCC
Confidence 8877653 5899999999998763221 1122121111 111 12478999999999999876432
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..|+.|++.++.
T Consensus 272 ~~G~~i~v~gG~ 283 (285)
T 2c07_A 272 INGRVFVIDGGL 283 (285)
T ss_dssp CCSCEEEESTTS
T ss_pred CCCCEEEeCCCc
Confidence 268899998864
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=168.10 Aligned_cols=206 Identities=17% Similarity=0.152 Sum_probs=147.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++|+||||+|+||++++++|+++|++|+++ .|+.+..... +...+ .++.++.+|+++++++.++++ +
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG--GQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT--CEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 689999999999999999999999999995 6765432221 11112 368889999999999988876 5
Q ss_pred ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCC-C-CCCchHHHhHHHH
Q 047628 77 ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGAS-S-SSPSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~-~-~~~~~y~~~K~~~ 142 (327)
+|+|||+||..... .....+++|+.++.++++++.. .+ ..+||++||.... . .....|+.+|.+.
T Consensus 80 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~ 158 (244)
T 1edo_A 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGV 158 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCCCCccchhhHHHH
Confidence 89999999975321 1134678999999999888765 35 6799999997543 2 2237899999998
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
+.+.+.. +++++++|||.+.++... ....+...... ..+ ...+++.+|+|++++.++..+..
T Consensus 159 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~dva~~~~~l~~~~~~~ 229 (244)
T 1edo_A 159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILG--TIP-------LGRTGQPENVAGLVEFLALSPAAS 229 (244)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHT--SCT-------TCSCBCHHHHHHHHHHHHHCSGGG
T ss_pred HHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhh--cCC-------CCCCCCHHHHHHHHHHHhCCCccC
Confidence 8877653 589999999999865211 11112111111 111 12478899999999999854321
Q ss_pred -CCCceEEecCCc
Q 047628 214 -SMGKIYELGGPD 225 (327)
Q Consensus 214 -~~~~~~~v~~~~ 225 (327)
..|+.|++.++.
T Consensus 230 ~~~G~~~~v~gG~ 242 (244)
T 1edo_A 230 YITGQAFTIDGGI 242 (244)
T ss_dssp GCCSCEEEESTTT
T ss_pred CcCCCEEEeCCCc
Confidence 258899999864
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-22 Score=174.06 Aligned_cols=228 Identities=14% Similarity=0.099 Sum_probs=159.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCC---CeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLG---QIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~---~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.++......... ... ++.++.+|+++++++.++++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 345789999999999999999999999999999998654322221110 012 58899999999998887775
Q ss_pred --cccEEEEccccccccC----------cchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCC-C--chHHHh
Q 047628 76 --KANVVINLIGREYETR----------NYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSS-P--SRVFST 138 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~----------~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~-~--~~y~~~ 138 (327)
++|+|||+||...... ....+++|+.++.++++++...- .-.++|++||....... + ..|+.+
T Consensus 104 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y~as 183 (297)
T 1xhl_A 104 FGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACA 183 (297)
T ss_dssp HSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred cCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchHHHH
Confidence 5899999999643211 13477889999999988876531 01599999998665433 3 689999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---H----HHHHHHhhc-CceeeecCCCceecceeHHHHHHH
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---N----KWAQFVKKF-NFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~----~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
|.+.+.+.+.. ++++.+++||.+.++..... . ......... ...+ ...+.+.+|+|++
T Consensus 184 Kaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~pedvA~~ 256 (297)
T 1xhl_A 184 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIP-------VGHCGKPEEIANI 256 (297)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCT-------TSSCBCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCC-------CCCCcCHHHHHHH
Confidence 99998887653 59999999999986521110 0 000011110 1111 1247889999999
Q ss_pred HHHHhhcC-C-CCCCceEEecCCccccHHHHHHHHHHH
Q 047628 204 VTAALKDD-G-TSMGKIYELGGPDIFTVHELAELMYDT 239 (327)
Q Consensus 204 ~~~~l~~~-~-~~~~~~~~v~~~~~~s~~el~~~i~~~ 239 (327)
++.++..+ . ...|+.+++.++..+.+.+.+..+.+.
T Consensus 257 v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 257 IVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSV 294 (297)
T ss_dssp HHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred HHHHhCCcccCCccCcEEEECCCccccccccccchhhh
Confidence 99998754 2 226899999998777766655544443
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1e-21 Score=171.00 Aligned_cols=217 Identities=14% Similarity=0.142 Sum_probs=152.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC------CCCCeeEEeeCCCChhHHHHHhcc--
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG------DLGQIVPMKFNPRDDNTIKATMAK-- 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~------~~~~v~~~~~Dl~~~~~~~~~~~~-- 76 (327)
++.++|+||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++.
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 456899999999999999999999999999999998654322111110 124688999999999999887763
Q ss_pred -----ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCC-CchHHHh
Q 047628 77 -----ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSS-PSRVFST 138 (327)
Q Consensus 77 -----~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~-~~~y~~~ 138 (327)
+|+|||+||..... . ....+++|+.++.++++++... + ..++|++||....... ...|+.+
T Consensus 96 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~Y~~s 174 (303)
T 1yxm_A 96 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKAGFPLAVHSGAA 174 (303)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTTCCTTCHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeecccCCCcchhhHHH
Confidence 89999999964211 1 1346789999999999987652 2 3689999998733222 2689999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCC--ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTE--DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
|.+.+.+.+.. +++++++|||.++|+. ..... ...... ..... ......+.+++|+|++++.++.
T Consensus 175 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~-~~~~~----~~p~~~~~~~~dvA~~i~~l~~ 248 (303)
T 1yxm_A 175 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGS-WGQSFF-EGSFQ----KIPAKRIGVPEEVSSVVCFLLS 248 (303)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGG-GGGGGG-TTGGG----GSTTSSCBCTHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccc-cchHHH-HHHHh----cCcccCCCCHHHHHHHHHHHhC
Confidence 99988877643 5899999999999873 21110 000000 00000 0011246889999999999997
Q ss_pred cCCC-CCCceEEecCCcccc
Q 047628 210 DDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~~~s 228 (327)
.... ..|+.+++.++..++
T Consensus 249 ~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 249 PAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp GGGTTCCSCEEEESTTGGGC
T ss_pred cccccCCCcEEEECCCeecc
Confidence 5432 268999999986544
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-21 Score=166.93 Aligned_cols=221 Identities=14% Similarity=0.065 Sum_probs=149.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC-chhhhcccCC--CCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGD--LGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.++++||||+|+||+++++.|+++|++|++++|+.+. .......... ..++.++.+|++|++++.++++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 456899999999999999999999999999999998654 2222111100 1358889999999999887775
Q ss_pred -cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 -KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
++|++||+||..... + ....+++|+.++.++++++. +.+ ..+||++||.......+ ..|+.+|.
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~ 160 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAKH 160 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCCCCchHHHHHH
Confidence 589999999974321 1 13467889999888888774 345 57999999987654333 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHH--HhhcCceeee-cCCCceecceeHHHHHHHHHHHhh
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQF--VKKFNFFPLF-GDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~--~~~~~~~~~~-~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+.+.+.+.. ++++.+++||.+.++.... ....... .......... ........+.+.+|+|++++.++.
T Consensus 161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s 240 (260)
T 1x1t_A 161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence 999887653 4899999999998763211 1100000 0000000000 000112357899999999999987
Q ss_pred cCC-CCCCceEEecCCcc
Q 047628 210 DDG-TSMGKIYELGGPDI 226 (327)
Q Consensus 210 ~~~-~~~~~~~~v~~~~~ 226 (327)
... ...|+++++.++..
T Consensus 241 ~~~~~~tG~~~~vdgG~~ 258 (260)
T 1x1t_A 241 DAAAQITGTTVSVDGGWT 258 (260)
T ss_dssp GGGTTCCSCEEEESTTGG
T ss_pred hhhcCCCCCEEEECCCcc
Confidence 643 22689999998743
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-22 Score=169.00 Aligned_cols=203 Identities=13% Similarity=-0.015 Sum_probs=144.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc----ccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK----ANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~----~d~vi~ 82 (327)
|++++||||+|+||++++++|+++|++|++++|+.++... . +.+|+++++++.++++. +|+|||
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-----------~-~~~Dl~~~~~v~~~~~~~~~~id~lv~ 68 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-----------D-LSTAEGRKQAIADVLAKCSKGMDGLVL 68 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------C-TTSHHHHHHHHHHHHTTCTTCCSEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-----------c-cccCCCCHHHHHHHHHHhCCCCCEEEE
Confidence 3689999999999999999999999999999998755321 1 57899999999988864 499999
Q ss_pred cccccc-ccCcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCC----------------------------C
Q 047628 83 LIGREY-ETRNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGAS----------------------------S 129 (327)
Q Consensus 83 ~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~----------------------------~ 129 (327)
+||... .......+++|+.++.++++++. +.+ ..++|++||...+ .
T Consensus 69 ~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (257)
T 1fjh_A 69 CAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAG 147 (257)
T ss_dssp CCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCC
T ss_pred CCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhccc
Confidence 999865 44446788999999999998875 344 5799999998766 2
Q ss_pred CCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 130 SSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 130 ~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
..+ ..|+.+|.+.+.+.+.. ++++.+++||.+.++..... .. ... ....... ......+.+.+|
T Consensus 148 ~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~-~~~~~~~--~~~~~~~~~~~d 221 (257)
T 1fjh_A 148 EQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD---PRY-GESIAKF--VPPMGRRAEPSE 221 (257)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------C--CCSTTSCCCTHH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc---hhH-HHHHHhc--ccccCCCCCHHH
Confidence 222 68999999999888653 59999999999986532211 10 000 0000000 001124688999
Q ss_pred HHHHHHHHhhcCCC-CCCceEEecCCcccc
Q 047628 200 VAAAVTAALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 200 ~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
+|++++.++..+.. ..|+.+++.++...+
T Consensus 222 vA~~~~~l~~~~~~~~tG~~~~vdgG~~~~ 251 (257)
T 1fjh_A 222 MASVIAFLMSPAASYVHGAQIVIDGGIDAV 251 (257)
T ss_dssp HHHHHHHHTSGGGTTCCSCEEEESTTHHHH
T ss_pred HHHHHHHHhCchhcCCcCCEEEECCCcccc
Confidence 99999999986532 268899999875443
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.2e-22 Score=168.20 Aligned_cols=211 Identities=18% Similarity=0.174 Sum_probs=153.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
.++.+++|||||+|+||++++++|+++|++|+++.|+....... +...+ .++.++.+|++|++++.++++
T Consensus 25 ~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 25 PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAG--GEAFAVKADVSQESEVEALFAAVIE 102 (269)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999854332221 11222 468899999999998887775
Q ss_pred ---cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC--CCchHHHh
Q 047628 76 ---KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS--SPSRVFST 138 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~--~~~~y~~~ 138 (327)
.+|++||+||...... -...+++|+.++.++++++. +.+ ..+||++||...... ....|+.+
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 181 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANYSAA 181 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCchhHHHH
Confidence 5799999999753211 13477899999999988863 344 469999999755322 23789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
|.+.+.+.+.. ++++.+++||.+..+....... ...... .+ ...+.+.+|+|++++.++.++
T Consensus 182 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~--~~~~~~--~p-------~~r~~~~~dvA~~v~~l~s~~ 250 (269)
T 4dmm_A 182 KAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA--EKLLEV--IP-------LGRYGEAAEVAGVVRFLAADP 250 (269)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH--HHHGGG--CT-------TSSCBCHHHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH--HHHHhc--CC-------CCCCCCHHHHHHHHHHHhCCc
Confidence 99988877643 5999999999998764332211 111111 11 124677899999999999873
Q ss_pred CC--CCCceEEecCCcccc
Q 047628 212 GT--SMGKIYELGGPDIFT 228 (327)
Q Consensus 212 ~~--~~~~~~~v~~~~~~s 228 (327)
.. ..|+++++.++..+|
T Consensus 251 ~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 251 AAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp GGGGCCSCEEEESTTSCCC
T ss_pred ccCCCcCCEEEECCCeecC
Confidence 21 258999999976543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.1e-22 Score=169.45 Aligned_cols=214 Identities=16% Similarity=0.141 Sum_probs=155.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++ +
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 446899999999999999999999999999999998765433222211 11468899999999999888776 5
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||..... . ....+++|+.++.++.+++.. .+ ..++|++||.......+ ..|+.+|.+.
T Consensus 104 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asKaa~ 182 (271)
T 4ibo_A 104 VDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARATVAPYTVAKGGI 182 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCCCchhHHHHHHHH
Confidence 89999999975321 1 134688999999999777644 34 46999999976654333 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++..++||.+..+..... +.+........+ ...+.+.+|+|++++.++....
T Consensus 183 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------~~r~~~pedva~~v~~L~s~~~ 253 (271)
T 4ibo_A 183 KMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTP---------AKRWGKPQELVGTAVFLSASAS 253 (271)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHST---------TCSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCC---------CCCCcCHHHHHHHHHHHhCccc
Confidence 9887653 48999999999986532221 112222221111 1245678999999999887643
Q ss_pred C-CCCceEEecCCcccc
Q 047628 213 T-SMGKIYELGGPDIFT 228 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~s 228 (327)
. ..|+++++.++...+
T Consensus 254 ~~itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 254 DYVNGQIIYVDGGMLSV 270 (271)
T ss_dssp TTCCSCEEEESTTGGGB
T ss_pred cCCCCcEEEECCCeecc
Confidence 2 268999999986544
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.6e-21 Score=167.72 Aligned_cols=214 Identities=14% Similarity=0.080 Sum_probs=141.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.+++|||||+|+||++++++|+++|++|++++|+.... ....... ....++.++++|++|++++.++++ +
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 107 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR 107 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999999754322 1111111 012468999999999998887776 6
Q ss_pred ccEEEEcccccc--cc-----C---cchhHhhhhHHHHHHHHHHHHc----C--CcceEEEEeccCCCCCCC--chHHHh
Q 047628 77 ANVVINLIGREY--ET-----R---NYSFEDVNHFMAERIAGIAKEH----G--GIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 77 ~d~vi~~a~~~~--~~-----~---~~~~~~~n~~~~~~l~~a~~~~----~--~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
+|++||+||... .. + ....+++|+.++.++++++... + ...++|++||.......+ ..|+.+
T Consensus 108 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~as 187 (280)
T 4da9_A 108 IDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMS 187 (280)
T ss_dssp CCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHH
T ss_pred CCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHH
Confidence 899999999731 11 1 1346788999999888877543 1 024899999987654433 789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
|.+.+.+.+.. ++++.+++||.+..+..... ........ .. ......+.+.+|+|++++.++..
T Consensus 188 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~-~~-------~~p~~r~~~pedvA~~v~~L~s~ 259 (280)
T 4da9_A 188 KAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIE-SG-------LVPMRRWGEPEDIGNIVAGLAGG 259 (280)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------------CCBCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHh-hc-------CCCcCCcCCHHHHHHHHHHHhCc
Confidence 99999887653 48899999999986532211 11111111 00 11123567889999999999986
Q ss_pred CCC-CCCceEEecCCccc
Q 047628 211 DGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~ 227 (327)
... ..|+++++.++..+
T Consensus 260 ~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 260 QFGFATGSVIQADGGLSI 277 (280)
T ss_dssp TTGGGTTCEEEESTTCC-
T ss_pred cccCCCCCEEEECCCccc
Confidence 652 26899999987543
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=166.87 Aligned_cols=213 Identities=15% Similarity=0.094 Sum_probs=154.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc------ccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------KAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------~~d 78 (327)
+..+++|||||+|.||++++++|+++|++|++++|+.++........+ .++.++++|+++++++.++++ ++|
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id 105 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG--NRAEFVSTNVTSEDSVLAAIEAANQLGRLR 105 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHTTSSEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 345789999999999999999999999999999998765443333333 468999999999999988775 479
Q ss_pred EEEEc-ccccccc----------C---cchhHhhhhHHHHHHHHHHHHcC---------CcceEEEEeccCCCCCCC--c
Q 047628 79 VVINL-IGREYET----------R---NYSFEDVNHFMAERIAGIAKEHG---------GIMRFIQISCLGASSSSP--S 133 (327)
Q Consensus 79 ~vi~~-a~~~~~~----------~---~~~~~~~n~~~~~~l~~a~~~~~---------~v~~~v~~Ss~~v~~~~~--~ 133 (327)
++||+ ++..... . ....+++|+.++.++++++...- +-.++|++||.......+ .
T Consensus 106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 185 (281)
T 3ppi_A 106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQT 185 (281)
T ss_dssp EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCH
T ss_pred eEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCc
Confidence 99999 5442211 1 14577889999999998875321 134899999987765444 7
Q ss_pred hHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 134 RVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 134 ~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.|+.+|.+.+.+.+.. ++++.+++||.+..+... ............ .+. ...+.+.+|+|++++
T Consensus 186 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~------~~~~~~pedvA~~v~ 257 (281)
T 3ppi_A 186 AYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAAN--IPF------PKRLGTPDEFADAAA 257 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHT--CCS------SSSCBCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhc--CCC------CCCCCCHHHHHHHHH
Confidence 8999999998887653 489999999988643111 111111112111 111 135678999999999
Q ss_pred HHhhcCCCCCCceEEecCCcccc
Q 047628 206 AALKDDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 206 ~~l~~~~~~~~~~~~v~~~~~~s 228 (327)
.++.++.. .|+++++.++..++
T Consensus 258 ~l~s~~~~-tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 258 FLLTNGYI-NGEVMRLDGAQRFT 279 (281)
T ss_dssp HHHHCSSC-CSCEEEESTTCCCC
T ss_pred HHHcCCCc-CCcEEEECCCcccC
Confidence 99987655 89999999987654
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=167.92 Aligned_cols=217 Identities=16% Similarity=0.050 Sum_probs=154.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|++|++++.++++ ++
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG--CGAAACRVDVSDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC--SSCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CcceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 445789999999999999999999999999999998765433333332 468899999999998887765 57
Q ss_pred cEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||..... + ....+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 183 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMSKAGII 183 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCchhHHHHHHHHH
Confidence 9999999975321 1 135778899999888887753 44 46899999987654444 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecC---CCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGD---GSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++.+++||.+.++.. ........ ......... ......+.+.+|+|++++.++.....
T Consensus 184 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~ 259 (277)
T 3gvc_A 184 QLSRITAAELRSSGIRSNTLLPAFVDTPMQ---QTAMAMFD-GALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDAS 259 (277)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HHHHTCC-------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHhcccCeEEEEEeeCCccCchH---HHhhhcch-hhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccC
Confidence 887643 58999999999985421 11100000 000000000 00112467899999999999976432
Q ss_pred -CCCceEEecCCcccc
Q 047628 214 -SMGKIYELGGPDIFT 228 (327)
Q Consensus 214 -~~~~~~~v~~~~~~s 228 (327)
..|+++++.++...+
T Consensus 260 ~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 260 MITGTTQIADGGTIAA 275 (277)
T ss_dssp TCCSCEEEESTTGGGS
T ss_pred CccCcEEEECCcchhc
Confidence 268999999986554
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=8.8e-21 Score=163.20 Aligned_cols=219 Identities=16% Similarity=0.089 Sum_probs=153.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC---------chhhh----ccc-CCCCCeeEEeeCCCChhHH
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED---------DPRHL----KLM-GDLGQIVPMKFNPRDDNTI 70 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~---------~~~~~----~~~-~~~~~v~~~~~Dl~~~~~~ 70 (327)
++.++++||||+|+||++++++|+++|++|++++|+.+. ....+ ... ....++.++.+|+++++++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 445789999999999999999999999999999985321 11111 111 1124688999999999998
Q ss_pred HHHhc-------cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC
Q 047628 71 KATMA-------KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS 131 (327)
Q Consensus 71 ~~~~~-------~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~ 131 (327)
.++++ ++|++||+||...... . ...+++|+.++.++++++.. .+.-.++|++||.......
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 172 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT 172 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC
Confidence 88775 5899999999754211 1 34678999999999888743 2213589999998776544
Q ss_pred C--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChh--HHHHHHHH-hhcCceeeecCCCceecceeHHH
Q 047628 132 P--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL--LNKWAQFV-KKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 132 ~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
+ ..|+.+|.+.+.+.+.. ++++.+++||.+.++.... ........ .....++.. ...+..+.+++|
T Consensus 173 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~r~~~p~d 250 (280)
T 3pgx_A 173 PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPM--PVQPNGFMTADE 250 (280)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCB--TTBCSSCBCHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhc--ccCCCCCCCHHH
Confidence 4 78999999999887653 5899999999999874322 11111111 001111111 112235889999
Q ss_pred HHHHHHHHhhcCCC-CCCceEEecCCc
Q 047628 200 VAAAVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 200 ~a~~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
+|++++.++..... ..|+++++.++.
T Consensus 251 vA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 251 VADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp HHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred HHHHHHHHhCccccCCCCCEEEECCCc
Confidence 99999999876542 268999999864
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=7.5e-21 Score=160.39 Aligned_cols=209 Identities=13% Similarity=0.044 Sum_probs=150.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK------- 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~------- 76 (327)
.++.++++||||+|+||++++++|+++|++|++++|+.++........ ++.++.+|++|++++.++++.
T Consensus 2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 77 (245)
T 1uls_A 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----GAHPVVMDVADPASVERGFAEALAHLGR 77 (245)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc----CCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 355689999999999999999999999999999999865433222221 278889999999998877753
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCC-CchHHHhHHHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSS-PSRVFSTKAAAE 143 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~-~~~y~~~K~~~E 143 (327)
+|+|||+||..... + -...+++|+.++.++.+++... + ..++|++||....... ...|+.+|.+.+
T Consensus 78 id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~Y~asK~a~~ 156 (245)
T 1uls_A 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVYLGNLGQANYAASMAGVV 156 (245)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGGGGCCTTCHHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccchhcCCCCchhHHHHHHHHH
Confidence 79999999974321 1 1346789999999998887543 4 5799999998733322 268999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++.+++||.+..+... .-.......... .+. ..+.+.+|+|++++.++..... .
T Consensus 157 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~p~-------~~~~~~~dvA~~v~~l~s~~~~~~ 227 (245)
T 1uls_A 157 GLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAA--TPL-------GRAGKPLEVAYAALFLLSDESSFI 227 (245)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHT--CTT-------CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhh--CCC-------CCCcCHHHHHHHHHHHhCchhcCC
Confidence 877653 589999999999765321 111111111111 111 2367889999999999876432 2
Q ss_pred CCceEEecCCcc
Q 047628 215 MGKIYELGGPDI 226 (327)
Q Consensus 215 ~~~~~~v~~~~~ 226 (327)
.|+.+.+.++..
T Consensus 228 tG~~~~vdgG~~ 239 (245)
T 1uls_A 228 TGQVLFVDGGRT 239 (245)
T ss_dssp CSCEEEESTTTT
T ss_pred cCCEEEECCCcc
Confidence 688999988754
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=3.1e-21 Score=163.10 Aligned_cols=194 Identities=16% Similarity=0.040 Sum_probs=139.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
|++++++||||+|+||++++++|+++| ++|++++|+.+.... +... ...++.++.+|+++++++.++++
T Consensus 1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~-l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (250)
T 1yo6_A 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE-LKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHH-HHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHH-HHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence 346789999999999999999999999 999999998765432 2222 12468999999999999888776
Q ss_pred --cccEEEEcccccc-cc--------CcchhHhhhhHHHHHHHHHHHHc----------CC----cceEEEEeccCCCCC
Q 047628 76 --KANVVINLIGREY-ET--------RNYSFEDVNHFMAERIAGIAKEH----------GG----IMRFIQISCLGASSS 130 (327)
Q Consensus 76 --~~d~vi~~a~~~~-~~--------~~~~~~~~n~~~~~~l~~a~~~~----------~~----v~~~v~~Ss~~v~~~ 130 (327)
++|+|||+||... .. .....+++|+.++.++++++... +. ..+||++||......
T Consensus 79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~ 158 (250)
T 1yo6_A 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT 158 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence 7999999998754 11 11346788999999988876542 10 358999999765432
Q ss_pred ---------CCchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecc
Q 047628 131 ---------SPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQP 194 (327)
Q Consensus 131 ---------~~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (327)
....|+.+|.+.|.+.+.+ ++++.+++||.+.++.... ..+
T Consensus 159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------~~~ 215 (250)
T 1yo6_A 159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------------NAA 215 (250)
T ss_dssp TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred CcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------------CCC
Confidence 2268999999999887653 5899999999886432110 135
Q ss_pred eeHHHHHHHHHHHhhcCCCC-CCceEEecC
Q 047628 195 VYVVDVAAAVTAALKDDGTS-MGKIYELGG 223 (327)
Q Consensus 195 i~~~D~a~~~~~~l~~~~~~-~~~~~~v~~ 223 (327)
++.+|+|+.++.++..+... .|+.+.+.+
T Consensus 216 ~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g 245 (250)
T 1yo6_A 216 LTVEQSTAELISSFNKLDNSHNGRFFMRNL 245 (250)
T ss_dssp ---HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred CCHHHHHHHHHHHHhcccccCCCeEEEECC
Confidence 78899999999999876521 465666555
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=164.36 Aligned_cols=210 Identities=14% Similarity=0.132 Sum_probs=152.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.......... .+...+++|++|++++.++++ ++
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG--DNGKGMALNVTNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHCCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--ccceEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 346899999999999999999999999999999998655433222222 247889999999999888776 68
Q ss_pred cEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E 143 (327)
|++||+||..... + ....+++|+.++.++.+++.. .+ ..++|++||....... ...|+.+|.+.+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 163 (248)
T 3op4_A 85 DILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNAGQANYAAAKAGVI 163 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHHHHHH
Confidence 9999999975321 1 134778999999999888743 44 5699999996553222 378999999988
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++.+++||.+..+..... .......... .+ ...+.+.+|+|++++.++..... .
T Consensus 164 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~dva~~v~~L~s~~~~~i 234 (248)
T 3op4_A 164 GFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQ--VP-------AGRLGDPREIASAVAFLASPEAAYI 234 (248)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHT--CT-------TCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCCccCCc
Confidence 887653 48999999999976532211 1111111111 11 13467899999999998875432 2
Q ss_pred CCceEEecCCcc
Q 047628 215 MGKIYELGGPDI 226 (327)
Q Consensus 215 ~~~~~~v~~~~~ 226 (327)
.|+++++.++..
T Consensus 235 tG~~i~vdgG~~ 246 (248)
T 3op4_A 235 TGETLHVNGGMY 246 (248)
T ss_dssp CSCEEEESTTSS
T ss_pred cCcEEEECCCee
Confidence 689999998743
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=6.6e-21 Score=161.85 Aligned_cols=217 Identities=18% Similarity=0.091 Sum_probs=149.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
+++++||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++ ++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999999998654322211110 01368889999999999888776 689
Q ss_pred EEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|||+||..... + ....+++|+.++.++.+++... +...++|++||.......+ ..|+.+|.+.+.
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~ 161 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG 161 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHH
Confidence 999999864321 1 1346788999988887776542 2135899999976543333 689999999998
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh-----cCc-eeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK-----FNF-FPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+.+.. ++++.+++||.+.++. .......... .+. ...+........+.+.+|+|++++.++..+
T Consensus 162 ~~~~la~e~~~~gi~v~~v~PG~v~t~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~ 238 (256)
T 1geg_A 162 LTQTAARDLAPLGITVNGYCPGIVKTPM---WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD 238 (256)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECSBSSHH---HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHcCeEEEEEEECCCccch---hhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcc
Confidence 87653 5899999999997542 1111100000 000 000001111134789999999999998765
Q ss_pred CC-CCCceEEecCCcc
Q 047628 212 GT-SMGKIYELGGPDI 226 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~~ 226 (327)
.. ..|+.+++.++..
T Consensus 239 ~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 239 SDYMTGQSLLIDGGMV 254 (256)
T ss_dssp GTTCCSCEEEESSSSS
T ss_pred ccCCCCCEEEeCCCcc
Confidence 32 2689999998754
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=167.09 Aligned_cols=219 Identities=14% Similarity=0.090 Sum_probs=152.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.++++||||+|+||++++++|+++|++|++++|+++......... .++.++.+|++|++++.++++ ++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 83 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---PGAVFILCDVTQEDDVKTLVSETIRRFGRL 83 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 44689999999999999999999999999999999865432222222 247889999999999887775 57
Q ss_pred cEEEEccccccccC---------cchhHhhhhHHHHHHHHHHHHc---CCcceEEEEeccCCC-C-CCCchHHHhHHHHH
Q 047628 78 NVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAKEH---GGIMRFIQISCLGAS-S-SSPSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~~~---~~v~~~v~~Ss~~v~-~-~~~~~y~~~K~~~E 143 (327)
|++||+||...... -...+++|+.++.++++++... + ..++|++||.... . .....|+.+|.+.+
T Consensus 84 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 162 (270)
T 1yde_A 84 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQAQAVPYVATKGAVT 162 (270)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCCCCCcccHHHHHHHH
Confidence 99999998743211 1346789999999999887531 2 3699999997542 2 23378999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHH----HHHHHHhh-cCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLN----KWAQFVKK-FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+.. ++++.+++||.++++...... ........ ....+ ...+.+.+|+|++++.++...
T Consensus 163 ~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~p~dva~~v~~L~s~~ 235 (270)
T 1yde_A 163 AMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP-------LGRMGQPAEVGAAAVFLASEA 235 (270)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST-------TSSCBCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC-------CCCCcCHHHHHHHHHHHcccC
Confidence 887653 599999999999865211100 00000000 00011 123568899999999988764
Q ss_pred CCCCCceEEecCCccccHHHHHH
Q 047628 212 GTSMGKIYELGGPDIFTVHELAE 234 (327)
Q Consensus 212 ~~~~~~~~~v~~~~~~s~~el~~ 234 (327)
....|+.+++.++..+.+.+...
T Consensus 236 ~~itG~~i~vdGG~~~~~~~~~~ 258 (270)
T 1yde_A 236 NFCTGIELLVTGGAELGYGCKAS 258 (270)
T ss_dssp TTCCSCEEEESTTTTSCC-----
T ss_pred CCcCCCEEEECCCeecccCcCcc
Confidence 33368999999987766544333
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.87 E-value=5.3e-21 Score=161.96 Aligned_cols=203 Identities=16% Similarity=0.120 Sum_probs=147.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------A 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~ 77 (327)
+++++++||||+|+||++++++|+++|++|++++|+.+... .+.++.+|++|++++.++++. +
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 88 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------GFLAVKCDITDTEQVEQAYKEIEETHGPV 88 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTSHHHHHHHHHHHHHHTCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----------cceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 44678999999999999999999999999999999865532 378889999999998877754 6
Q ss_pred cEEEEccccccc--------cCcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYE--------TRNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~--------~~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||.... ......+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 89 D~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 167 (253)
T 2nm0_A 89 EVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQANYAASKAGLV 167 (253)
T ss_dssp SEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCcHHHHHHHHHHH
Confidence 999999997432 12245778999999988887643 35 57999999987664433 68999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHH-HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLN-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++.+++||.+..+....+. ........ ..+ ...+++.+|+|++++.++..+.. .
T Consensus 168 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~--~~p-------~~~~~~p~dvA~~i~~l~s~~~~~~ 238 (253)
T 2nm0_A 168 GFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVS--QVP-------LGRYARPEEIAATVRFLASDDASYI 238 (253)
T ss_dssp HHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHT--TCT-------TCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHh--cCC-------CCCCcCHHHHHHHHHHHhCccccCC
Confidence 887653 488999999988654211111 00011110 011 12468899999999999976532 2
Q ss_pred CCceEEecCCccc
Q 047628 215 MGKIYELGGPDIF 227 (327)
Q Consensus 215 ~~~~~~v~~~~~~ 227 (327)
.|+.+.+.++..+
T Consensus 239 tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 239 TGAVIPVDGGLGM 251 (253)
T ss_dssp CSCEEEESTTTTC
T ss_pred cCcEEEECCcccc
Confidence 6889999987543
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.3e-22 Score=168.22 Aligned_cols=213 Identities=16% Similarity=0.088 Sum_probs=152.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
.++++++|||||+|+||++++++|+++|++|++++|+.+..... +...+ .++..+.+|++|++++.++++
T Consensus 25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 102 (270)
T 3ftp_A 25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAG--LEGRGAVLNVNDATAVDALVESTLKE 102 (270)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence 34568999999999999999999999999999999986543322 22222 357889999999998887775
Q ss_pred --cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhH
Q 047628 76 --KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K 139 (327)
++|++||+||...... -...+++|+.++.++++++.. .+ -.++|++||....... ...|+.+|
T Consensus 103 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 181 (270)
T 3ftp_A 103 FGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQVNYAAAK 181 (270)
T ss_dssp HSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCchhHHHHH
Confidence 5899999999753221 134678999999999988753 33 4689999997654333 37899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+.+.+.. ++++.+++||.+..+....+ ......... ......+.+.+|+|++++.++...
T Consensus 182 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~ 252 (270)
T 3ftp_A 182 AGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKT---------QIPLGRLGSPEDIAHAVAFLASPQ 252 (270)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9998887653 48999999999874311111 111111111 111235678999999999988644
Q ss_pred CC-CCCceEEecCCcccc
Q 047628 212 GT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~~~s 228 (327)
.. ..|+++++.++..+|
T Consensus 253 ~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 253 AGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp GTTCCSCEEEESTTSSCC
T ss_pred cCCccCcEEEECCCcccC
Confidence 32 268999999976543
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-21 Score=163.46 Aligned_cols=212 Identities=16% Similarity=0.087 Sum_probs=152.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++|||||+|+||++++++|+++|++|+++ .|+.+.......... ...++.++.+|++|++++.++++ .
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999999999999987 776544322222111 12468999999999999888775 3
Q ss_pred ccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||..... +. ...+++|+.++.++++++. +.+ ..++|++||.......+ ..|+.+|.+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 161 (258)
T 3oid_A 83 LDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAAL 161 (258)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence 59999999864321 11 3467899999999988874 344 56999999987764433 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.+.+.. ++++.+++||.+..+..... .......... .+ ...+.+.+|+|++++.++....
T Consensus 162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~~~dva~~v~~L~s~~~ 232 (258)
T 3oid_A 162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQN--TP-------AGRMVEIKDMVDTVEFLVSSKA 232 (258)
T ss_dssp HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHH--CT-------TSSCBCHHHHHHHHHHHTSSTT
T ss_pred HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHhCccc
Confidence 9888653 48899999999976532111 1122222211 11 1346788999999999998654
Q ss_pred C-CCCceEEecCCccc
Q 047628 213 T-SMGKIYELGGPDIF 227 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~ 227 (327)
. ..|+++++.++...
T Consensus 233 ~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 233 DMIRGQTIIVDGGRSL 248 (258)
T ss_dssp TTCCSCEEEESTTGGG
T ss_pred CCccCCEEEECCCccC
Confidence 2 26899999998654
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=166.90 Aligned_cols=210 Identities=14% Similarity=0.053 Sum_probs=151.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++ .+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI 102 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 35789999999999999999999999999999998655333222211 12468999999999998887765 57
Q ss_pred cEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHH------cCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 78 NVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKE------HGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~------~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
|+|||+||...... . ...+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.+|.+
T Consensus 103 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~asKaa 181 (279)
T 3sju_A 103 GILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVMYAAPYTASKHG 181 (279)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCCCChhHHHHHHH
Confidence 99999999753211 1 34677999999999998754 44 56999999987654443 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH------------HHHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL------------NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
++.+.+.. ++++.+++||.+.++..... ........ .......+.+++|+|+
T Consensus 182 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedvA~ 252 (279)
T 3sju_A 182 VVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFN---------AKIPLGRYSTPEEVAG 252 (279)
T ss_dssp HHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHH---------TTCTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHH---------hcCCCCCCCCHHHHHH
Confidence 98887653 48999999999874311100 11111111 1112235678999999
Q ss_pred HHHHHhhcCCC-CCCceEEecCCc
Q 047628 203 AVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 203 ~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
+++.++..... ..|+++++.++.
T Consensus 253 ~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 253 LVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp HHHHHTSSGGGGCCSCEEEESTTC
T ss_pred HHHHHhCccccCcCCcEEEECCCc
Confidence 99999876542 268999999874
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.87 E-value=8.2e-22 Score=172.99 Aligned_cols=228 Identities=17% Similarity=0.102 Sum_probs=161.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC----------CCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHh
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG----------CEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~----------~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~ 74 (327)
..+++|||||+|+||++++++|+++|++|++++|+ .+.......... ...++.++.+|++|++++.+++
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 35789999999999999999999999999999987 222111111110 1146889999999999988777
Q ss_pred c-------cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHHcCC---------cceEEEEeccCCCCC
Q 047628 75 A-------KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKEHGG---------IMRFIQISCLGASSS 130 (327)
Q Consensus 75 ~-------~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~~~~---------v~~~v~~Ss~~v~~~ 130 (327)
+ ++|++||+||..... + -...+++|+.++.++++++...-. -.+||++||......
T Consensus 106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~ 185 (322)
T 3qlj_A 106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG 185 (322)
T ss_dssp HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC
Confidence 5 689999999975321 1 135778999999999988754310 038999999755432
Q ss_pred C--CchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 131 S--PSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 131 ~--~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
. ...|+.+|.+++.+.+.. ++++.+++|| +..+.. ..... ..........+++.+|+
T Consensus 186 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~------------~~~~~~~~~~~~~pedv 252 (322)
T 3qlj_A 186 SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAE------------MMATQDQDFDAMAPENV 252 (322)
T ss_dssp BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------------------CCTTCGGGT
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhh------------hhhccccccCCCCHHHH
Confidence 2 368999999999888653 4889999999 543311 11000 00011222455688999
Q ss_pred HHHHHHHhhcCCC-CCCceEEecCCccc-----------------cHHHHHHHHHHHhhcCCcc
Q 047628 201 AAAVTAALKDDGT-SMGKIYELGGPDIF-----------------TVHELAELMYDTIREYPHY 246 (327)
Q Consensus 201 a~~~~~~l~~~~~-~~~~~~~v~~~~~~-----------------s~~el~~~i~~~~g~~~~~ 246 (327)
|.+++.++..... ..|+++++.++... ++.|+++.+.+.+|.+.+.
T Consensus 253 a~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~ 316 (322)
T 3qlj_A 253 SPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKARPP 316 (322)
T ss_dssp HHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHSCCC
T ss_pred HHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhccCCC
Confidence 9999999875432 26899999998755 7799999999999876443
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-21 Score=161.80 Aligned_cols=217 Identities=18% Similarity=0.149 Sum_probs=151.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC--chhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED--DPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~--~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++||||+|+||++++++|+++|++|++++|+.+. ......... ...++.++.+|+++++++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999998654 222211111 11468899999999998887775 6
Q ss_pred ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCc-ceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 77 ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGI-MRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v-~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
+|++||+||..... + ....+++|+.++.++++++.. .+ . .++|++||.......+ ..|+.+|.+
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK~a 160 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGFPILSAYSTTKFA 160 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCCCCchhHHHHHHH
Confidence 89999999974321 1 134678999999988888764 35 5 6999999987654433 689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHH-hh-cC---c-eeeecCCCceecceeHHHHHHHHHHHh
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFV-KK-FN---F-FPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~-~~-~~---~-~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+.+.+.. ++++.+++||.+..+ ......... .. .. . ............+.+.+|+|++++.++
T Consensus 161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~ 237 (258)
T 3a28_C 161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTG---MWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLA 237 (258)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCBCSH---HHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCeEEEEEECCccCCh---hhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence 99887653 599999999998643 211111000 00 00 0 000001111124688999999999999
Q ss_pred hcCCC-CCCceEEecCCccc
Q 047628 209 KDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~~ 227 (327)
..... ..|+.+++.++..+
T Consensus 238 s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 238 SENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp SGGGTTCCSCEEEESSSSCC
T ss_pred CcccCCCCCCEEEECCCEec
Confidence 76532 26899999987544
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-21 Score=161.13 Aligned_cols=203 Identities=13% Similarity=0.077 Sum_probs=136.3
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
|.+.++++++|||||+|.||++++++|+++|++|++++|+.++......... ...++.++.+|++|++++.++++
T Consensus 1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 6667778899999999999999999999999999999998776443322211 11468999999999999988876
Q ss_pred --cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|++||+||...... -...+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+|
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 159 (252)
T 3h7a_A 81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGSGFAAFASAK 159 (252)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCTTCHHHHHHH
T ss_pred hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCCCCccHHHHH
Confidence 5799999999753211 1346788999988888876 3444 46999999987654443 7899999
Q ss_pred HHHHHHHHhh-------CCCe-EEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 140 AAAEEAVLRE-------LPWA-TIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~-~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+.+.+.. ++++ .++.||.+..+.... ..... ........ +..+.+.+|+|++++.++..+
T Consensus 160 aa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~---~~~~~-----~~~~~~~~-~~~~~~pedvA~~~~~l~s~~ 230 (252)
T 3h7a_A 160 FGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE---RREQM-----FGKDALAN-PDLLMPPAAVAGAYWQLYQQP 230 (252)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------------CCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhc---cchhh-----hhhhhhcC-CccCCCHHHHHHHHHHHHhCc
Confidence 9999887654 4777 789999886442111 10000 00001111 123789999999999999866
Q ss_pred CC
Q 047628 212 GT 213 (327)
Q Consensus 212 ~~ 213 (327)
..
T Consensus 231 ~~ 232 (252)
T 3h7a_A 231 KS 232 (252)
T ss_dssp GG
T ss_pred hh
Confidence 53
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-21 Score=163.48 Aligned_cols=211 Identities=14% Similarity=0.030 Sum_probs=154.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------A 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~ 77 (327)
++.++++||||+|+||++++++|+++|++|++++|+.+.......... .++.++.+|++|++++.++++. +
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGRL 81 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 456899999999999999999999999999999998654333222222 3688999999999988877753 6
Q ss_pred cEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 78 NVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
|++||+||...... . ...+++|+.++.++++++...- +..++|++||.... ..+ ..|+.+|.+.+.+.
T Consensus 82 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~ 160 (263)
T 2a4k_A 82 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLA 160 (263)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHH
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHHHHH
Confidence 99999999753211 1 3467899999999999987642 02599999998877 333 67999999888877
Q ss_pred Hhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCc
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGK 217 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~ 217 (327)
+.. ++++.+++||.+.++.... ........... .+. ..+.+.+|+|++++.++..... ..|+
T Consensus 161 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~--~p~-------~~~~~p~dvA~~v~~l~s~~~~~~tG~ 231 (263)
T 2a4k_A 161 RTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGA--SPL-------GRAGRPEEVAQAALFLLSEESAYITGQ 231 (263)
T ss_dssp HHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHT--STT-------CSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCccccCCcCC
Confidence 643 5899999999998763211 11111112111 111 2467889999999999876432 2688
Q ss_pred eEEecCCccc
Q 047628 218 IYELGGPDIF 227 (327)
Q Consensus 218 ~~~v~~~~~~ 227 (327)
.+++.++..+
T Consensus 232 ~i~vdgG~~~ 241 (263)
T 2a4k_A 232 ALYVDGGRSI 241 (263)
T ss_dssp EEEESTTTTT
T ss_pred EEEECCCccc
Confidence 9999987654
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=167.36 Aligned_cols=217 Identities=13% Similarity=0.103 Sum_probs=153.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC-CC---CeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD-LG---QIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~---~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+++++++||||+|+||++++++|+++|++|++++|+.++.......... .. ++.++.+|++|++++.++++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 83 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHh
Confidence 4568999999999999999999999999999999986543322221111 12 58899999999998887775
Q ss_pred --cccEEEEccccccccC------------cchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCC-C--chHH
Q 047628 76 --KANVVINLIGREYETR------------NYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSS-P--SRVF 136 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~------------~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~-~--~~y~ 136 (327)
++|+|||+||...... ....+++|+.++.++++++...- .-.++|++||....... + ..|+
T Consensus 84 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~ 163 (280)
T 1xkq_A 84 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYA 163 (280)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcccHHH
Confidence 5899999999743211 13467889999999998876531 01599999998765433 3 6899
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---H----HHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---N----KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
.+|.+.+.+.+.. ++++.+++||.+.++..... . .......... .......+.+.+|+|+
T Consensus 164 asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~p~~~~~~pedvA~ 237 (280)
T 1xkq_A 164 IAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK------ECIPIGAAGKPEHIAN 237 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT------TTCTTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH------cCCCCCCCCCHHHHHH
Confidence 9999999887653 59999999999987631111 0 0001111100 0011134788999999
Q ss_pred HHHHHhhcC-C-CCCCceEEecCCccc
Q 047628 203 AVTAALKDD-G-TSMGKIYELGGPDIF 227 (327)
Q Consensus 203 ~~~~~l~~~-~-~~~~~~~~v~~~~~~ 227 (327)
+++.++..+ . ...|+.+++.++..+
T Consensus 238 ~v~~l~s~~~~~~~tG~~i~vdgG~~~ 264 (280)
T 1xkq_A 238 IILFLADRNLSFYILGQSIVADGGTSL 264 (280)
T ss_dssp HHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred HHHHhcCcccccCccCCeEEECCCccc
Confidence 999998754 2 226899999987543
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.2e-20 Score=161.22 Aligned_cols=224 Identities=17% Similarity=0.134 Sum_probs=154.7
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc------------hhhhc----cc-CCCCCeeEEeeCCC
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD------------PRHLK----LM-GDLGQIVPMKFNPR 65 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~------------~~~~~----~~-~~~~~v~~~~~Dl~ 65 (327)
..+..++++||||+|.||+++++.|+++|++|++++|+.+.. ...+. .. ....++.++.+|++
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 345568999999999999999999999999999999873211 11111 11 11246889999999
Q ss_pred ChhHHHHHhc-------cccEEEEccccccccC------c---chhHhhhhHHHHHHHHHHHHc----CCcceEEEEecc
Q 047628 66 DDNTIKATMA-------KANVVINLIGREYETR------N---YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCL 125 (327)
Q Consensus 66 ~~~~~~~~~~-------~~d~vi~~a~~~~~~~------~---~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~ 125 (327)
+++++.++++ .+|++||+||...... . ...+++|+.++.++++++... +.-.++|++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 9999887775 5899999999743321 1 347789999999999887542 212489999998
Q ss_pred CCCCCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh--cCc------eeeecCC
Q 047628 126 GASSSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK--FNF------FPLFGDG 188 (327)
Q Consensus 126 ~v~~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~--~~~------~~~~~~~ 188 (327)
......+ ..|+.+|.+.+.+.+.. ++++.+++||.+..+.......+...... ... .......
T Consensus 167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (286)
T 3uve_A 167 GGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHT 246 (286)
T ss_dssp GGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHTTCS
T ss_pred hhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHhhhc
Confidence 7765444 68999999999887653 48999999999987643211111100000 000 0000011
Q ss_pred CceecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCccc
Q 047628 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 189 ~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
.+..+.+.+|+|++++.++..... ..|+++++.++..+
T Consensus 247 -~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 247 -LPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp -SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -cCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 114578899999999999976432 26999999997654
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.7e-21 Score=164.94 Aligned_cols=195 Identities=16% Similarity=0.102 Sum_probs=142.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+..... . ..++.++.+|++|++++.++++ ++
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-~----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 88 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-N----LPNTLCAQVDVTDKYTFDTAITRAEKIYGPA 88 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-C----CTTEEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-h----cCCceEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 4567899999999999999999999999999999985442211 1 1368899999999998887775 67
Q ss_pred cEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||...... . ...+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 89 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~~~~~~Y~asK~a~~ 167 (266)
T 3p19_A 89 DAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFPDHAAYCGTKFAVH 167 (266)
T ss_dssp EEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCCCCCchHHHHHHHHH
Confidence 99999999753211 1 246789999999977765 3455 57999999987765444 78999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++.+++||.+..+..... .......... ..+ ...+++.+|+|++++.++..+..
T Consensus 168 ~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~-------~~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 168 AISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD-------MGGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH-------TTCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc-------ccCCCCHHHHHHHHHHHHcCCCC
Confidence 877643 59999999999987632110 1111111100 011 12467899999999999998764
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.8e-21 Score=164.30 Aligned_cols=213 Identities=14% Similarity=0.074 Sum_probs=153.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++++|++|++++.++++ +
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 446899999999999999999999999999999998765433222211 11468899999999999888776 6
Q ss_pred ccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCC----CCchHHHhHH
Q 047628 77 ANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSS----SPSRVFSTKA 140 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~----~~~~y~~~K~ 140 (327)
+|++||+||...... + ...+++|+.++.++++++... +.-.++|++||...... ....|+.+|.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKa 189 (276)
T 3r1i_A 110 IDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKA 189 (276)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHH
Confidence 899999999754321 1 245689999999998887542 21158999999765422 2267999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.+.+.. ++++.+++||.+..+............... .+ ...+.+.+|+|++++.++.....
T Consensus 190 a~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~--~p-------~~r~~~pedvA~~v~fL~s~~~~ 260 (276)
T 3r1i_A 190 AVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPK--IP-------LGRMGRPEELTGLYLYLASAASS 260 (276)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHHGGG--ST-------TSSCBCGGGSHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCcccc
Confidence 999887653 489999999999876433222222222211 11 12456789999999999876432
Q ss_pred -CCCceEEecCCcc
Q 047628 214 -SMGKIYELGGPDI 226 (327)
Q Consensus 214 -~~~~~~~v~~~~~ 226 (327)
..|+++++.++..
T Consensus 261 ~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 261 YMTGSDIVIDGGYT 274 (276)
T ss_dssp TCCSCEEEESTTTT
T ss_pred CccCcEEEECcCcc
Confidence 2689999998753
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.3e-21 Score=164.84 Aligned_cols=218 Identities=14% Similarity=0.134 Sum_probs=148.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++.+++|||||+|+||++++++|+++|++|+++.|+.... ....... ....++.++.+|+++++++.++++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 5578999999999999999999999999999985554332 2111111 112468899999999999888775
Q ss_pred cccEEEEccccccccC------c---chhHhhhhHHHHHHHHHHHHcCCc--ceEEEEeccCCC-CC--CCchHHHhHHH
Q 047628 76 KANVVINLIGREYETR------N---YSFEDVNHFMAERIAGIAKEHGGI--MRFIQISCLGAS-SS--SPSRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~------~---~~~~~~n~~~~~~l~~a~~~~~~v--~~~v~~Ss~~v~-~~--~~~~y~~~K~~ 141 (327)
++|++||+||...... . ...+++|+.++.++++++...- . .++|++||.... .. ....|+.+|.+
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa 164 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKM-AKGGAIVTFSSQAGRDGGGPGALAYATSKGA 164 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGE-EEEEEEEEECCHHHHHCCSTTCHHHHHHHHH
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCEEEEEcCHHhccCCCCCcHHHHHHHHH
Confidence 5799999998642111 1 3467899999999999998763 2 389999997654 22 23689999999
Q ss_pred HHHHHHhh----C--CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 142 AEEAVLRE----L--PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 142 ~E~~~~~~----~--~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.+.. + +++..+.||.+..+...... . ...............+.+.+|+|++++.++..... .
T Consensus 165 ~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~---~----~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~i 237 (259)
T 3edm_A 165 VMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT---K----PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYV 237 (259)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------CCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc---C----hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCc
Confidence 99888654 2 88899999988754221110 0 00011111112234567899999999999876532 2
Q ss_pred CCceEEecCCccccHH
Q 047628 215 MGKIYELGGPDIFTVH 230 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~ 230 (327)
.|+++++.|+...+..
T Consensus 238 tG~~i~vdGg~~~~~~ 253 (259)
T 3edm_A 238 TGACYDINGGVLFSEG 253 (259)
T ss_dssp CSCEEEESBCSSBC--
T ss_pred cCCEEEECCCcCCCCC
Confidence 6899999997665543
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=163.31 Aligned_cols=211 Identities=15% Similarity=0.157 Sum_probs=147.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC-CCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+++++++||||+|+||++++++|+++|++|+++.| +.+.......... ...++.++.+|++|++++.++++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 45689999999999999999999999999999999 4433221111110 11468889999999999888776
Q ss_pred cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC--CCchHHHhHHH
Q 047628 76 KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS--SPSRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~ 141 (327)
++|++||+||..... + ....+++|+.++.++.+++ ++.+ ..++|++||...... ....|+.+|.+
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a 160 (246)
T 2uvd_A 82 QVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAKAG 160 (246)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence 689999999975321 1 1346788999976666654 4455 679999999755322 33789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.+.. ++++.+++||.+..+..... .......... .+ ...+++.+|+|++++.++..+..
T Consensus 161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~p-------~~~~~~~~dvA~~~~~l~s~~~~ 231 (246)
T 2uvd_A 161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKL--IP-------AAQFGEAQDIANAVTFFASDQSK 231 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHT--CT-------TCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHcCchhc
Confidence 98876543 58999999999976532111 1111111111 11 12478899999999999976432
Q ss_pred -CCCceEEecCCc
Q 047628 214 -SMGKIYELGGPD 225 (327)
Q Consensus 214 -~~~~~~~v~~~~ 225 (327)
..|+.+++.++.
T Consensus 232 ~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 232 YITGQTLNVDGGM 244 (246)
T ss_dssp TCCSCEEEESTTS
T ss_pred CCCCCEEEECcCc
Confidence 268899998864
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-20 Score=158.97 Aligned_cols=203 Identities=18% Similarity=0.172 Sum_probs=145.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++++||||+|+||++++++|+++|++|++++|+.+... .+..+.+|+++++++.++++ ++
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 82 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------GLFGVEVDVTDSDAVDRAFTAVEEHQGPV 82 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------HhcCeeccCCCHHHHHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999999876532 12247899999998887775 47
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E 143 (327)
|++||+||..... .....+++|+.++.++++++.. .+ ..++|++||....... ...|+.+|.+.+
T Consensus 83 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~ 161 (247)
T 1uzm_A 83 EVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVI 161 (247)
T ss_dssp SEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCCCCChhHHHHHHHHH
Confidence 9999999975321 1135778999999999887753 45 6799999998664333 378999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TS 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~ 214 (327)
.+.+.. ++++.+++||.+.++....+ ........ ...+ ...+.+.+|+|++++.++.... ..
T Consensus 162 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~--~~~p-------~~~~~~~~dvA~~~~~l~s~~~~~~ 232 (247)
T 1uzm_A 162 GMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGAL--QFIP-------AKRVGTPAEVAGVVSFLASEDASYI 232 (247)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHG--GGCT-------TCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHH--hcCC-------CCCCcCHHHHHHHHHHHcCccccCC
Confidence 887653 58999999999874311100 11111111 0111 1246889999999999987543 22
Q ss_pred CCceEEecCCccc
Q 047628 215 MGKIYELGGPDIF 227 (327)
Q Consensus 215 ~~~~~~v~~~~~~ 227 (327)
.|+.+++.++..+
T Consensus 233 ~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 233 SGAVIPVDGGMGM 245 (247)
T ss_dssp CSCEEEESTTTTC
T ss_pred cCCEEEECCCccc
Confidence 6899999987543
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.87 E-value=9.6e-21 Score=161.88 Aligned_cols=203 Identities=15% Similarity=0.121 Sum_probs=149.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
...++||||||+|+||++++++|+++|++|++++|+.+... ..+..+++|++|++++.++++ .+
T Consensus 12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (269)
T 3vtz_A 12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRI 82 (269)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------TSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------CceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 45689999999999999999999999999999999876542 246788999999998888775 58
Q ss_pred cEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||...... + ...+++|+.++.++++++.. .+ ..++|++||...+...+ ..|+.+|.+.+
T Consensus 83 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 161 (269)
T 3vtz_A 83 DILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATKNAAAYVTSKHALL 161 (269)
T ss_dssp CEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCChhHHHHHHHHH
Confidence 99999999753211 1 34667999999888887643 44 56999999987765444 78999999999
Q ss_pred HHHHhh------CCCeEEEecCeeecCCChhH------------HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 144 EAVLRE------LPWATIMRPAAMIGTEDRLL------------NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 144 ~~~~~~------~~~~~i~r~~~~~G~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
.+.+.. ++++.+++||.+.++..... ......... ......+.+.+|+|++++
T Consensus 162 ~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~ 232 (269)
T 3vtz_A 162 GLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR---------QHPMGRIGRPEEVAEVVA 232 (269)
T ss_dssp HHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH---------HSTTSSCBCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh---------cCCCCCCcCHHHHHHHHH
Confidence 988653 48889999999975421100 111111111 111235678999999999
Q ss_pred HHhhcCCC-CCCceEEecCCcc
Q 047628 206 AALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 206 ~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
.++..... ..|+++++.++..
T Consensus 233 ~L~s~~~~~itG~~i~vdGG~~ 254 (269)
T 3vtz_A 233 FLASDRSSFITGACLTVDGGLL 254 (269)
T ss_dssp HHHSGGGTTCCSCEEEESTTGG
T ss_pred HHhCCccCCCcCcEEEECCCcc
Confidence 99876432 2689999999754
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.9e-21 Score=168.16 Aligned_cols=214 Identities=17% Similarity=0.134 Sum_probs=154.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+......... ....++.++.+|++|++++.++++
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 34679999999999999999999999999999999875432222110 112468899999999998887775
Q ss_pred cccEEEEccccccccC---------cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCC--CchHHHhHHHHH
Q 047628 76 KANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSS--PSRVFSTKAAAE 143 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E 143 (327)
.+|++||+||...... ....+++|+.++.++++++...- +-.++|++||....... ...|+.+|.+.+
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 204 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIV 204 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHHH
Confidence 5799999998743211 13578999999999999998752 12489999997664333 378999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChh-H-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRL-L-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.+.. ++++.+++||.+.++.... . ...... +........+.+.+|+|++++.++.....
T Consensus 205 ~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~---------~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~ 275 (291)
T 3ijr_A 205 AFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQ---------FGSNVPMQRPGQPYELAPAYVYLASSDSSY 275 (291)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHH---------TTTTSTTSSCBCGGGTHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHH---------HHccCCCCCCcCHHHHHHHHHHHhCCccCC
Confidence 887653 5999999999998652110 0 111111 11122234567889999999999876532
Q ss_pred CCCceEEecCCccc
Q 047628 214 SMGKIYELGGPDIF 227 (327)
Q Consensus 214 ~~~~~~~v~~~~~~ 227 (327)
..|+++++.++..+
T Consensus 276 itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 276 VTGQMIHVNGGVIV 289 (291)
T ss_dssp CCSCEEEESSSCCC
T ss_pred CcCCEEEECCCccc
Confidence 26899999987544
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-21 Score=165.92 Aligned_cols=214 Identities=14% Similarity=0.079 Sum_probs=152.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+..+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++++|++|++++.++++
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 345799999999999999999999999999999998655332222110 01468999999999998887765
Q ss_pred cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|++||+||...... . ...+++|+.++.++.+++... +.-.++|++||.......+ ..|+.+|.+
T Consensus 98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a 177 (266)
T 4egf_A 98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAG 177 (266)
T ss_dssp SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHH
Confidence 6899999999754211 1 346789999999998887542 2124899999987765444 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+.+.. ++++..++||.+..+..... .......... .+ ...+.+.+|+|++++.++...
T Consensus 178 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~dva~~v~~L~s~~ 248 (266)
T 4egf_A 178 LVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIAR--IP-------LGRFAVPHEVSDAVVWLASDA 248 (266)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTT--CT-------TSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHhCch
Confidence 99887653 48999999999975421100 1111111111 11 134577899999999998764
Q ss_pred CC-CCCceEEecCCccc
Q 047628 212 GT-SMGKIYELGGPDIF 227 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~~~ 227 (327)
.. ..|+++++.++..+
T Consensus 249 ~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 249 ASMINGVDIPVDGGYTM 265 (266)
T ss_dssp GTTCCSCEEEESTTGGG
T ss_pred hcCccCcEEEECCCccC
Confidence 32 26899999997654
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.7e-21 Score=164.99 Aligned_cols=218 Identities=16% Similarity=0.063 Sum_probs=152.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++|||||+|.||++++++|+++|++|++++|+.+.......... ...++.++++|++|++++.++++ ++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 35789999999999999999999999999999998755333222221 12468899999999998887775 58
Q ss_pred cEEEEcccccccc------Cc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCC--CCC--chHHHhHH
Q 047628 78 NVVINLIGREYET------RN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASS--SSP--SRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~~------~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~--~~~--~~y~~~K~ 140 (327)
|++||+||..... +. ...+++|+.++.++++++ ++.+ ..++|++||..... ..+ ..|+.+|.
T Consensus 107 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~~~Y~asKa 185 (283)
T 3v8b_A 107 DIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYTATKA 185 (283)
T ss_dssp CEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCSTTCHHHHHHHH
T ss_pred CEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCCCCchHHHHHHH
Confidence 9999999974321 11 346789999999999987 4555 57999999987654 222 68999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCce--ecceeHHHHHHHHHHHhhcC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR--IQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~~~D~a~~~~~~l~~~ 211 (327)
+.+.+.+.. ++++.+++||.+..+............ .............. ..+...+|+|++++.++...
T Consensus 186 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s~~ 264 (283)
T 3v8b_A 186 AQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEE-TAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER 264 (283)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHH-HSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchh-hhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcCcc
Confidence 999888754 388999999999765321110000000 00001111111111 34578899999999998764
Q ss_pred CC-CCCceEEecCCc
Q 047628 212 GT-SMGKIYELGGPD 225 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~ 225 (327)
.. ..|+++++.++.
T Consensus 265 a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 265 ARHVTGSPVWIDGGQ 279 (283)
T ss_dssp GTTCCSCEEEESTTH
T ss_pred ccCCcCCEEEECcCc
Confidence 32 268999999874
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=162.18 Aligned_cols=224 Identities=13% Similarity=0.075 Sum_probs=153.7
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC---------chhhh----ccc-CCCCCeeEEeeCCCCh
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED---------DPRHL----KLM-GDLGQIVPMKFNPRDD 67 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~---------~~~~~----~~~-~~~~~v~~~~~Dl~~~ 67 (327)
...+..+++|||||+|.||++++++|+++|++|++++|+.+. ....+ ... ....++.++.+|++|+
T Consensus 6 ~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~ 85 (277)
T 3tsc_A 6 AGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDF 85 (277)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence 334556899999999999999999999999999999985321 11111 111 1124688999999999
Q ss_pred hHHHHHhc-------cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCC
Q 047628 68 NTIKATMA-------KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGAS 128 (327)
Q Consensus 68 ~~~~~~~~-------~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~ 128 (327)
+++.++++ .+|++||+||...... -...+++|+.++.++++++.. .+.-.++|++||....
T Consensus 86 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 165 (277)
T 3tsc_A 86 DRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGM 165 (277)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhC
Confidence 98887775 4799999999754321 134678999999998887543 2212589999998776
Q ss_pred CCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCce-eeecCCCceeccee
Q 047628 129 SSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFF-PLFGDGSTRIQPVY 196 (327)
Q Consensus 129 ~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~ 196 (327)
...+ ..|+.+|.+.+.+.+.. ++++..++||.+..+... ............+.. .... ...+..+.+
T Consensus 166 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~r~~~ 244 (277)
T 3tsc_A 166 KMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLT-PFLPDWVAE 244 (277)
T ss_dssp SCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTC-CSSSCSCBC
T ss_pred CCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhh-hccCCCCCC
Confidence 5444 68999999999888653 489999999999865321 111111111111111 1111 111224789
Q ss_pred HHHHHHHHHHHhhcCCC-CCCceEEecCCcc
Q 047628 197 VVDVAAAVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 197 ~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
.+|+|++++.++..... ..|+++++.++..
T Consensus 245 pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 275 (277)
T 3tsc_A 245 PEDIADTVCWLASDESRKVTAAQIPVDQGST 275 (277)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCccccCCcCCEEeeCCCcc
Confidence 99999999999976542 2689999998753
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.1e-21 Score=161.33 Aligned_cols=203 Identities=12% Similarity=0.004 Sum_probs=149.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-------EEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc---
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-------QVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
+++|+||||+|+||++++++|+++|+ +|++++|+.+.......... ...++.++.+|+++++++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 47899999999999999999999999 99999998654322211111 11468899999999999888775
Q ss_pred ----cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ----KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|+|||+||..... .....+++|+.++.++++++. +.+ ..+||++||...+...+ ..|+.
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~ 160 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCM 160 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHH
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCCCCchhHH
Confidence 589999999975321 113467889999999988874 345 57999999987765443 78999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+|.+.|.+.+.. +++++++|||.++++...... . .. ...+++.+|+|++++.++..
T Consensus 161 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---------~-------~~-~~~~~~~~dva~~~~~l~~~ 223 (244)
T 2bd0_A 161 SKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD---------D-------EM-QALMMMPEDIAAPVVQAYLQ 223 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC---------S-------TT-GGGSBCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc---------c-------cc-cccCCCHHHHHHHHHHHHhC
Confidence 999999887542 489999999999976421100 0 00 13678999999999999987
Q ss_pred CCC-CCCceEEecCCccc
Q 047628 211 DGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~ 227 (327)
+.. ..++++...+++.+
T Consensus 224 ~~~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 224 PSRTVVEEIILRPTSGDI 241 (244)
T ss_dssp CTTEEEEEEEEEETTCCC
T ss_pred CccccchheEEecccccc
Confidence 653 14556666665544
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-21 Score=165.69 Aligned_cols=209 Identities=17% Similarity=0.090 Sum_probs=143.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEe-eCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++++|||||+|+||++++++|+++|++|+++ .|+.+......... ....++.++.+|+++++++.++++ ++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 105 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL 105 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999999999999999887 45443322211111 011468899999999998887775 57
Q ss_pred cEEEEccccccc-c-----C---cchhHhhhhHHHHHHHHHHHHc------CCcceEEEEeccCCCCC---CCchHHHhH
Q 047628 78 NVVINLIGREYE-T-----R---NYSFEDVNHFMAERIAGIAKEH------GGIMRFIQISCLGASSS---SPSRVFSTK 139 (327)
Q Consensus 78 d~vi~~a~~~~~-~-----~---~~~~~~~n~~~~~~l~~a~~~~------~~v~~~v~~Ss~~v~~~---~~~~y~~~K 139 (327)
|+|||+||.... . + ....+++|+.++.++++++... ++..+||++||...... ....|+.+|
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK 185 (272)
T 4e3z_A 106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASK 185 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHH
Confidence 999999997532 1 1 1357789999999999887653 11358999999765322 225799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.+.+ ++++.+++||.+.++.... ......... .......+.+++|+|++++.++..
T Consensus 186 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~~~~~~~edvA~~i~~l~s~ 256 (272)
T 4e3z_A 186 AAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMA---------PSVPMQRAGMPEEVADAILYLLSP 256 (272)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------------CCTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHh---------hcCCcCCCcCHHHHHHHHHHHhCC
Confidence 9999877543 5899999999998763211 111111111 111223456789999999999975
Q ss_pred CCC-CCCceEEecCC
Q 047628 211 DGT-SMGKIYELGGP 224 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~ 224 (327)
... ..|++|++.++
T Consensus 257 ~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 257 SASYVTGSILNVSGG 271 (272)
T ss_dssp GGTTCCSCEEEESTT
T ss_pred ccccccCCEEeecCC
Confidence 432 26899999886
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=161.10 Aligned_cols=218 Identities=12% Similarity=0.124 Sum_probs=157.1
Q ss_pred CCcccCCcEEEEEcCCCc--cHHHHHHHHHhCCCEEEEeeCCCCCchh--hhcccCCCCCeeEEeeCCCChhHHHHHhc-
Q 047628 1 MTYVYSGIIATVFGTTGF--LGRYVVQQLAKMGSQVLVPFRGCEDDPR--HLKLMGDLGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~--iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
|.+.++.++++||||+|+ ||++++++|+++|++|+++.|+...... .+.......++.++.+|+++++++.++++
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence 667777899999999998 9999999999999999999998543211 11111111368999999999998887775
Q ss_pred ------cccEEEEccccccc---------cC---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--ch
Q 047628 76 ------KANVVINLIGREYE---------TR---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SR 134 (327)
Q Consensus 76 ------~~d~vi~~a~~~~~---------~~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~ 134 (327)
.+|++||+||.... .+ ....+++|+.++.++++++...- +-.++|++||.......| ..
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~ 160 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNV 160 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHH
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcch
Confidence 47999999997531 11 13467889999999999987653 024899999987665444 68
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh---hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR---LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
|+.+|.+.+.+.+.. ++++.+++||.+..+... ............ .+. ..+.+.+|+|+++
T Consensus 161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~p~dva~~v 231 (266)
T 3oig_A 161 MGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEER--APL-------RRTTTPEEVGDTA 231 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHH--STT-------SSCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhc--CCC-------CCCCCHHHHHHHH
Confidence 999999999887653 489999999999764211 112222222211 111 2356789999999
Q ss_pred HHHhhcCCC-CCCceEEecCCccc
Q 047628 205 TAALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 205 ~~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
+.++..... ..|+++++.++-..
T Consensus 232 ~~l~s~~~~~~tG~~i~vdGG~~~ 255 (266)
T 3oig_A 232 AFLFSDMSRGITGENLHVDSGFHI 255 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHcCCchhcCcCCEEEECCCeEE
Confidence 999986432 26899999987543
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-20 Score=159.31 Aligned_cols=211 Identities=13% Similarity=-0.006 Sum_probs=151.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHh-CCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----cccE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAK-MGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-----KANV 79 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~~d~ 79 (327)
+++++|||||+|+||++++++|++ .|+.|+++.|+.+... ..+.++.+|+++++++.++++ ++|+
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~ 73 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA---------ENLKFIKADLTKQQDITNVLDIIKNVSFDG 73 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC---------TTEEEEECCTTCHHHHHHHHHHTTTCCEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc---------ccceEEecCcCCHHHHHHHHHHHHhCCCCE
Confidence 457899999999999999999999 7899999998866322 257899999999999988876 6799
Q ss_pred EEEccccccccC--------cchhHhhhhHHHHHHHHHHHHcCCc--ceEEEEeccCCCCCCC--chHHHhHHHHHHHHH
Q 047628 80 VINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEHGGI--MRFIQISCLGASSSSP--SRVFSTKAAAEEAVL 147 (327)
Q Consensus 80 vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~~~v--~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~ 147 (327)
+||+||...... -...+++|+.++.++++++...- . .++|++||.......+ ..|+.+|.+.+.+.+
T Consensus 74 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~-~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~ 152 (244)
T 4e4y_A 74 IFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNL-KVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTK 152 (244)
T ss_dssp EEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGE-EEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHh-ccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHH
Confidence 999999753211 13467899999999999987653 2 3899999987765444 689999999998886
Q ss_pred hh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhh--cCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCC
Q 047628 148 RE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKK--FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMG 216 (327)
Q Consensus 148 ~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~ 216 (327)
.. ++++.+++||.+..+... ........... ...............+.+.+|+|++++.++..... ..|
T Consensus 153 ~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~itG 232 (244)
T 4e4y_A 153 SLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKFMTG 232 (244)
T ss_dssp HHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccccccC
Confidence 43 599999999999754211 11111000000 00000001111223567899999999999976442 268
Q ss_pred ceEEecCCcc
Q 047628 217 KIYELGGPDI 226 (327)
Q Consensus 217 ~~~~v~~~~~ 226 (327)
+++++.++..
T Consensus 233 ~~i~vdGG~~ 242 (244)
T 4e4y_A 233 GLIPIDGGYT 242 (244)
T ss_dssp CEEEESTTGG
T ss_pred CeEeECCCcc
Confidence 9999998754
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.4e-21 Score=166.14 Aligned_cols=214 Identities=16% Similarity=0.125 Sum_probs=154.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhh----hcccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
++.+++|||||+|+||++++++|+++|++|+++.|+.+.. ... +...+ .++.++.+|++|++++.++++
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999998874321 111 11222 468899999999998877764
Q ss_pred ---cccEEEEccccccccC---------cchhHhhhhHHHHHHHHHHHHcCCcc--eEEEEeccCCCCCCC--chHHHhH
Q 047628 76 ---KANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAKEHGGIM--RFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~~~~~v~--~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|++||+||...... -...+++|+.++.++++++...- .+ ++|++||.......+ ..|+.+|
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~~g~Iv~isS~~~~~~~~~~~~Y~asK 203 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLL-PKGASIITTSSIQAYQPSPHLLDYAATK 203 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGC-CTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHh-hcCCEEEEECChhhccCCCCchHHHHHH
Confidence 5799999999743211 13578999999999999998764 33 899999987765544 6899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.+.+.+.. ++++.+++||.+.++.. .....................+.+.+|+|++++.++....
T Consensus 204 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~------~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~ 277 (294)
T 3r3s_A 204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQ------ISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQES 277 (294)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHH------HTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEecCcCccccc------cccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccc
Confidence 9999887653 59999999999985320 0000000011111122223456788999999999987543
Q ss_pred C-CCCceEEecCCccc
Q 047628 213 T-SMGKIYELGGPDIF 227 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~ 227 (327)
. ..|+++++.++..+
T Consensus 278 ~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 278 SYVTAEVHGVCGGEHL 293 (294)
T ss_dssp TTCCSCEEEESTTCCC
T ss_pred cCCCCCEEEECCCccC
Confidence 2 26899999998654
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=170.48 Aligned_cols=206 Identities=14% Similarity=0.003 Sum_probs=138.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+++++||||||+|+||++++++|+++|++|++++|+.++...... ..+...++.++.+|+++++++.++++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 446799999999999999999999999999999998765433222 22212268899999999999888775
Q ss_pred -cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHcC---------CcceEEEEeccCCCCCCC--chH
Q 047628 76 -KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEHG---------GIMRFIQISCLGASSSSP--SRV 135 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~~---------~v~~~v~~Ss~~v~~~~~--~~y 135 (327)
++|+|||+||..... .....+++|+.++.++++++.... +-.+||++||.......+ ..|
T Consensus 86 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y 165 (319)
T 3ioy_A 86 GPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIY 165 (319)
T ss_dssp CCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHH
Confidence 469999999974321 113578899999999998876432 024799999987765444 689
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHH-Hhh--cCceeeecCCCceecceeHHHHHH
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQF-VKK--FNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~-~~~--~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
+.+|.+++.+.+.. ++++++++||.+.++..... ...... ... ...+... .......++.+|+|+
T Consensus 166 ~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~pe~vA~ 243 (319)
T 3ioy_A 166 NTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERL--AGVHEFGMEPDVIGA 243 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------------------------------CCGGGSSBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHH--HHhhhcCCCHHHHHH
Confidence 99999766665432 59999999999986532110 100000 000 0000000 011112279999999
Q ss_pred HHHHHhhcCC
Q 047628 203 AVTAALKDDG 212 (327)
Q Consensus 203 ~~~~~l~~~~ 212 (327)
.++.+++.+.
T Consensus 244 ~~~~al~~~~ 253 (319)
T 3ioy_A 244 RVIEAMKANR 253 (319)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999999654
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.9e-21 Score=164.25 Aligned_cols=211 Identities=17% Similarity=0.109 Sum_probs=151.4
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++.++++||||+|.||+++++.|+++|++|++++|+.+.........+ .++.++++|++|++++.++++ +
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG--KKARAIAADISDPGSVKALFAEIQALTGG 80 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC--CceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 3567899999999999999999999999999999998765443333333 468899999999998888775 5
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHH----HHHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGI----AKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a----~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||...... -...+++|+.++.++.++ +++.+...++|++||.......+ ..|+.+|.+.
T Consensus 81 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 160 (247)
T 3rwb_A 81 IDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGV 160 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHH
Confidence 899999999753211 134778999999998887 44443236899999976543333 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhH-H-HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLL-N-KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.+.. ++++..++||.+..+..... . ......... .+ ...+.+.+|+|++++.++.....
T Consensus 161 ~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~-------~~r~~~pedva~~v~~L~s~~~~ 231 (247)
T 3rwb_A 161 IGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--QA-------MKGKGQPEHIADVVSFLASDDAR 231 (247)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--SS-------SCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--cc-------cCCCcCHHHHHHHHHHHhCcccc
Confidence 8887653 58999999999875311000 0 000000000 11 12346789999999999876532
Q ss_pred -CCCceEEecCCc
Q 047628 214 -SMGKIYELGGPD 225 (327)
Q Consensus 214 -~~~~~~~v~~~~ 225 (327)
..|+++++.++.
T Consensus 232 ~itG~~i~vdGG~ 244 (247)
T 3rwb_A 232 WITGQTLNVDAGM 244 (247)
T ss_dssp TCCSCEEEESTTS
T ss_pred CCCCCEEEECCCc
Confidence 268999999864
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.4e-20 Score=156.70 Aligned_cols=201 Identities=15% Similarity=0.085 Sum_probs=145.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
+++++||||+|+||++++++|+++|++|++++|+.++... .. ++..+.+|+++ +++.++++ ++|+
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~----~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~ 73 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ---SL----GAVPLPTDLEK-DDPKGLVKRALEALGGLHV 73 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH---HH----TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---hh----CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence 4789999999999999999999999999999998654211 11 26788999998 76665543 6899
Q ss_pred EEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCC--C--chHHHhHHHHH
Q 047628 80 VINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSS--P--SRVFSTKAAAE 143 (327)
Q Consensus 80 vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~--~--~~y~~~K~~~E 143 (327)
+||+||...... ....+++|+.++.++.+++ ++.+ ..++|++||....... + ..|+.+|.+.+
T Consensus 74 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~ 152 (239)
T 2ekp_A 74 LVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALL 152 (239)
T ss_dssp EEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHHHHHHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHHHHHHHH
Confidence 999999743211 1346788999988888876 3455 6799999998765433 3 68999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++.+++||.+.++..... +.+...... ..+ ...+.+.+|+|++++.++.....
T Consensus 153 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~p-------~~~~~~~~dvA~~~~~l~s~~~~ 223 (239)
T 2ekp_A 153 GLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITA--RIP-------MGRWARPEEIARVAAVLCGDEAE 223 (239)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHT--TCT-------TSSCBCHHHHHHHHHHHTSGGGT
T ss_pred HHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHh--cCC-------CCCCcCHHHHHHHHHHHcCchhc
Confidence 887653 58999999999986532211 111111111 111 12467899999999999876432
Q ss_pred -CCCceEEecCCc
Q 047628 214 -SMGKIYELGGPD 225 (327)
Q Consensus 214 -~~~~~~~v~~~~ 225 (327)
..|+.+++.++.
T Consensus 224 ~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 224 YLTGQAVAVDGGF 236 (239)
T ss_dssp TCCSCEEEESTTT
T ss_pred CCCCCEEEECCCc
Confidence 268899998864
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=164.72 Aligned_cols=220 Identities=16% Similarity=0.126 Sum_probs=156.4
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
...++||||||+ |+||++++++|+++|++|++++|+... ...+... ...+++.++.+|+++++++.++++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 456899999999 999999999999999999999998433 2222211 111358899999999999888775
Q ss_pred -cccEEEEccccccc----------cC---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 -KANVVINLIGREYE----------TR---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 -~~d~vi~~a~~~~~----------~~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
.+|++||+||.... .. ....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as 170 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLA 170 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHH
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhHH
Confidence 46999999997542 11 13467889999999999987652 024899999987654444 789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
|.+.+.+.+.. ++++.+++||.+..+.... ...+........++ ..+.+.+|+|++++.++
T Consensus 171 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~---------~~~~~pedva~~i~~l~ 241 (271)
T 3ek2_A 171 KAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL---------KRNVTIEQVGNAGAFLL 241 (271)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc---------CCCCCHHHHHHHHHHHc
Confidence 99999887653 4999999999998653221 12222222221111 23567899999999999
Q ss_pred hcCCC-CCCceEEecCCccccHHHHHH
Q 047628 209 KDDGT-SMGKIYELGGPDIFTVHELAE 234 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~~s~~el~~ 234 (327)
..... ..|+++++.++..+++.++.+
T Consensus 242 s~~~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 242 SDLASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp SGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred CcccCCeeeeEEEECCCeeeehhhhhh
Confidence 86432 268999999998888776654
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=5.2e-21 Score=163.48 Aligned_cols=211 Identities=13% Similarity=0.046 Sum_probs=149.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC-Cchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE-DDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~-~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
.+++++++||||+|+||++++++|+++|++|+++.+... ......... ....++.++.+|+++++++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 345689999999999999999999999999977665432 222212111 112478999999999999888775
Q ss_pred -cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHH-----HcCCcceEEEEeccCCCCCC--CchHHHhH
Q 047628 76 -KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAK-----EHGGIMRFIQISCLGASSSS--PSRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~-----~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K 139 (327)
.+|+|||+||..... .....+++|+.++.++++++. +.+ ..++|++||....... ...|+.+|
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK 181 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGNRGQVNYSAAK 181 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCCCCCchhHHHH
Confidence 589999999975321 113577899999999999873 344 5799999997553222 37899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.+.+.+.. ++++.+++||.+..+............... .+ ...+.+.+|+|++++.++....
T Consensus 182 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~--~p-------~~~~~~~edva~~~~~L~s~~~ 252 (267)
T 4iiu_A 182 AGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALKEAMSM--IP-------MKRMGQAEEVAGLASYLMSDIA 252 (267)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHHHHHHT--CT-------TCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHhCCcc
Confidence 9887776543 489999999999876433222222222221 11 1245678999999999987643
Q ss_pred C-CCCceEEecCC
Q 047628 213 T-SMGKIYELGGP 224 (327)
Q Consensus 213 ~-~~~~~~~v~~~ 224 (327)
. ..|+++++.++
T Consensus 253 ~~itG~~i~vdGG 265 (267)
T 4iiu_A 253 GYVTRQVISINGG 265 (267)
T ss_dssp TTCCSCEEEESTT
T ss_pred cCccCCEEEeCCC
Confidence 2 26899999886
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.1e-21 Score=165.00 Aligned_cols=204 Identities=11% Similarity=-0.005 Sum_probs=141.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
.++++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++ ++
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 35789999999999999999999999999999998765433222211 12468999999999999888775 68
Q ss_pred cEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||..... .....+++|+.++.++++++.. .+...++|++||.......+ ..|+.+|.+.+
T Consensus 110 d~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 189 (301)
T 3tjr_A 110 DVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVV 189 (301)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHH
Confidence 9999999975321 1135778999999999998643 22135899999987765444 78999999998
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHH-----HhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQF-----VKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+.. ++++.+++||.+..+. ....... .....+...++.......+++++|+|++++.+++.+
T Consensus 190 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~~ 266 (301)
T 3tjr_A 190 GLAETLAREVKPNGIGVSVLCPMVVETKL---VSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILAN 266 (301)
T ss_dssp HHHHHHHHHHGGGTEEEEEECCSCCCSSH---HHHHHHHC----------------------CCCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcccCcEEEEEECCcccccc---ccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHHhcC
Confidence 887653 4899999999987432 1111100 000111111222233456899999999999999976
Q ss_pred C
Q 047628 212 G 212 (327)
Q Consensus 212 ~ 212 (327)
.
T Consensus 267 ~ 267 (301)
T 3tjr_A 267 R 267 (301)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=7.3e-21 Score=161.58 Aligned_cols=213 Identities=17% Similarity=0.088 Sum_probs=149.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC-CCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR-GCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R-~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
..+++||||||+|+||++++++|+++|++|+++.| +.+.......... ...++.++.+|+++++++.++++
T Consensus 11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (256)
T 3ezl_A 11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG 90 (256)
T ss_dssp --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence 44689999999999999999999999999999884 4443322222111 11468899999999998887775
Q ss_pred cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|+|||+||..... .....+++|+.++.++.+++ ++.+ ..++|++||.......+ ..|+.+|.+
T Consensus 91 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a 169 (256)
T 3ezl_A 91 EIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAKAG 169 (256)
T ss_dssp CEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCSCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCCCCcccHHHHHH
Confidence 579999999975421 11357789999988777765 4455 57999999976654333 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.+.. ++++.+++||.+..+... ..+.......... + ...+.+.+|+|++++.++.....
T Consensus 170 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~--~-------~~~~~~~~dva~~~~~l~s~~~~ 240 (256)
T 3ezl_A 170 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATI--P-------VRRLGSPDEIGSIVAWLASEESG 240 (256)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHS--T-------TSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcC--C-------CCCCcCHHHHHHHHHHHhCCccc
Confidence 98887643 488999999998754211 1122222222111 1 12456789999999998865432
Q ss_pred -CCCceEEecCCccc
Q 047628 214 -SMGKIYELGGPDIF 227 (327)
Q Consensus 214 -~~~~~~~v~~~~~~ 227 (327)
..|+++++.++..+
T Consensus 241 ~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 241 FSTGADFSLNGGLHM 255 (256)
T ss_dssp TCCSCEEEESTTSCC
T ss_pred CCcCcEEEECCCEeC
Confidence 26899999987543
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-20 Score=162.30 Aligned_cols=212 Identities=14% Similarity=0.122 Sum_probs=151.8
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+.++++|||||+ |+||+++++.|+++|++|++++|+.+ ....+.... ..+++.++.+|+++++++.++++
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW 97 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 345789999999 99999999999999999999999864 111221110 01247889999999998887775
Q ss_pred -cccEEEEccccccc--------c-C---cchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 -KANVVINLIGREYE--------T-R---NYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 -~~d~vi~~a~~~~~--------~-~---~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
++|+|||+||.... . + ....+++|+.++.++++++...- +-.+||++||.......+ ..|+.+
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s 177 (285)
T 2p91_A 98 GSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIA 177 (285)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHH
T ss_pred CCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHH
Confidence 57999999997532 1 1 13477899999999999987652 025999999976654333 689999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
|.+.+.+.+.. ++++.+++||.+.++.... ...+........ +. ..+.+++|+|++++.++
T Consensus 178 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--p~-------~~~~~~~dva~~~~~l~ 248 (285)
T 2p91_A 178 KAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVN--PF-------GKPITIEDVGDTAVFLC 248 (285)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHS--TT-------SSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcC--CC-------CCCcCHHHHHHHHHHHc
Confidence 99999887653 5999999999999874321 122222222111 11 13567899999999998
Q ss_pred hcCCC-CCCceEEecCCcc
Q 047628 209 KDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~~ 226 (327)
..... ..|+.|++.++..
T Consensus 249 s~~~~~~tG~~~~vdgg~~ 267 (285)
T 2p91_A 249 SDWARAITGEVVHVDNGYH 267 (285)
T ss_dssp SGGGTTCCSCEEEESTTGG
T ss_pred CCcccCCCCCEEEECCCcc
Confidence 75332 2588999998743
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.6e-21 Score=166.16 Aligned_cols=215 Identities=13% Similarity=0.108 Sum_probs=154.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++++++|||||+|.||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 446899999999999999999999999999999998655332222110 01468899999999998887775
Q ss_pred cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHH
Q 047628 76 KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~ 141 (327)
.+|++||+||...... -...+++|+.++.++.+++.. .+ ..++|++||....... ...|+.+|.+
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa 183 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQVHAGSAKAA 183 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCTTCHHHHHHHHH
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCcHHHHHHHHH
Confidence 5899999999643211 135778999999999998743 33 3599999997654332 3789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCCh-hH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDR-LL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.. ++++.+++||.+.++... .. .......... .+ ...+.+.+|+|++++.++..
T Consensus 184 ~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~p~dvA~~v~fL~s~ 254 (277)
T 4fc7_A 184 VDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTA--SP-------LQRLGNKTEIAHSVLYLASP 254 (277)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHT--ST-------TSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhcc--CC-------CCCCcCHHHHHHHHHHHcCC
Confidence 99887653 489999999999865210 00 1111111111 11 12456889999999999985
Q ss_pred CCC-CCCceEEecCCccccH
Q 047628 211 DGT-SMGKIYELGGPDIFTV 229 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~s~ 229 (327)
... ..|+++++.++..+++
T Consensus 255 ~~~~itG~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 255 LASYVTGAVLVADGGAWLTF 274 (277)
T ss_dssp GGTTCCSCEEEESTTHHHHC
T ss_pred ccCCcCCCEEEECCCcccCC
Confidence 432 2799999999866554
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=158.37 Aligned_cols=194 Identities=14% Similarity=0.021 Sum_probs=146.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------cc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------AN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d 78 (327)
|++++|||||+|+||++++++|+++|++|++++|+.++.. ...+.+|++|++++.++++. +|
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD 89 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------DHSFTIKDSGEEEIKSVIEKINSKSIKVD 89 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------SEEEECSCSSHHHHHHHHHHHHTTTCCEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------ccceEEEeCCHHHHHHHHHHHHHHcCCCC
Confidence 4578999999999999999999999999999999876532 24568899999988877753 59
Q ss_pred EEEEcccccccc---------CcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 79 VVINLIGREYET---------RNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 79 ~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
+|||+||..... .....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|.+.+.+.
T Consensus 90 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~ 169 (251)
T 3orf_A 90 TFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHII 169 (251)
T ss_dssp EEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHH
T ss_pred EEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHH
Confidence 999999964221 113567899999999999988753 013899999987654443 78999999999988
Q ss_pred Hhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc---CCCC
Q 047628 147 LRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD---DGTS 214 (327)
Q Consensus 147 ~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---~~~~ 214 (327)
+.. ++++.+++||.+..+ ... ... .......+++.+|+|++++.++.. ...
T Consensus 170 ~~la~e~~~~~~gi~v~~v~PG~v~t~---~~~----~~~---------~~~~~~~~~~~~dva~~i~~l~~~~~~~~~- 232 (251)
T 3orf_A 170 KDLASENGGLPAGSTSLGILPVTLDTP---TNR----KYM---------SDANFDDWTPLSEVAEKLFEWSTNSDSRPT- 232 (251)
T ss_dssp HHHTSTTSSSCTTCEEEEEEESCBCCH---HHH----HHC---------TTSCGGGSBCHHHHHHHHHHHHHCGGGCCC-
T ss_pred HHHHHHhcccCCCcEEEEEecCcCcCc---chh----hhc---------ccccccccCCHHHHHHHHHHHhcCccccCC-
Confidence 753 377899999988632 111 111 111234678899999999999987 333
Q ss_pred CCceEEecCCccc
Q 047628 215 MGKIYELGGPDIF 227 (327)
Q Consensus 215 ~~~~~~v~~~~~~ 227 (327)
.|+.+++.+++..
T Consensus 233 tG~~i~v~~g~~~ 245 (251)
T 3orf_A 233 NGSLVKFETKSKV 245 (251)
T ss_dssp TTCEEEEEEETTE
T ss_pred cceEEEEecCCcc
Confidence 6889999876543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.8e-21 Score=163.85 Aligned_cols=214 Identities=15% Similarity=0.085 Sum_probs=147.6
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
|...++.++++||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 1 MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR 80 (262)
T ss_dssp --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4555667899999999999999999999999999999998654322221111 11368889999999998877765
Q ss_pred ---cccEEEEccccc-ccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ---KANVVINLIGRE-YET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ---~~d~vi~~a~~~-~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|+|||+||.. ... . -...+++|+.++.++++++.. .+ ..++|++||.......+ ..|+.
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a 159 (262)
T 1zem_A 81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGT 159 (262)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCCchHHH
Confidence 589999999865 211 1 134678899999988887654 34 56999999976543333 68999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH-H---------------H-HHHHHhhcCceeeecCCCceec
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL-N---------------K-WAQFVKKFNFFPLFGDGSTRIQ 193 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~-~---------------~-~~~~~~~~~~~~~~~~~~~~~~ 193 (327)
+|.+.+.+.+.. ++++.+++||.+..+..... . . ........ .+ ...
T Consensus 160 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~r 230 (262)
T 1zem_A 160 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS--VP-------MRR 230 (262)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT--ST-------TSS
T ss_pred HHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhc--CC-------CCC
Confidence 999988877653 58999999998864311100 0 0 00001000 11 123
Q ss_pred ceeHHHHHHHHHHHhhcCCC-CCCceEEecCC
Q 047628 194 PVYVVDVAAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
+...+|+|++++.++..... ..|+.+.+.++
T Consensus 231 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 231 YGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp CBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 56789999999998875432 26888888764
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.86 E-value=2.7e-20 Score=161.65 Aligned_cols=221 Identities=17% Similarity=0.140 Sum_probs=153.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc--------hhh-------hcccCCCCCeeEEeeCCCChh
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--------PRH-------LKLMGDLGQIVPMKFNPRDDN 68 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--------~~~-------~~~~~~~~~v~~~~~Dl~~~~ 68 (327)
.+..+++|||||+|.||++++++|+++|++|++++|+.... ... +...+ .++.++++|++|++
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG--RRIIASQVDVRDFD 102 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT--CCEEEEECCTTCHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcC--CceEEEECCCCCHH
Confidence 34568999999999999999999999999999999874311 111 11122 46889999999999
Q ss_pred HHHHHhc-------cccEEEEccccccccC------c---chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCC
Q 047628 69 TIKATMA-------KANVVINLIGREYETR------N---YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGAS 128 (327)
Q Consensus 69 ~~~~~~~-------~~d~vi~~a~~~~~~~------~---~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~ 128 (327)
++.++++ .+|++||+||...... . ...+++|+.++.++++++... ++..++|++||....
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~ 182 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL 182 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence 8887775 5899999999753321 1 357789999999999986542 214689999998766
Q ss_pred CCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh--cCcee------eecCCCce
Q 047628 129 SSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK--FNFFP------LFGDGSTR 191 (327)
Q Consensus 129 ~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~ 191 (327)
...+ ..|+.+|.+++.+.+.. ++++..++||.+..+.............. ..... ..... .+
T Consensus 183 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p 261 (299)
T 3t7c_A 183 RGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHV-LP 261 (299)
T ss_dssp SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSS-SS
T ss_pred cCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhcc-cC
Confidence 4444 78999999999887653 48999999999987642211110000000 00000 00000 11
Q ss_pred ecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCccc
Q 047628 192 IQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 192 ~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
..+.+.+|+|++++.++..... ..|+++++.++..+
T Consensus 262 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 262 IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 3467899999999999976532 26999999998654
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=157.61 Aligned_cols=200 Identities=13% Similarity=0.006 Sum_probs=145.4
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
|..+.++++++||||+|+||++++++|+++|++|++++|+.+... .....+.+|+++++++.++++
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~ 71 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKL 71 (241)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 444455689999999999999999999999999999999876532 135678999999998887765
Q ss_pred ----cccEEEEccccccccC---------cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 ----KANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|+|||+||...... ....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|
T Consensus 72 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 151 (241)
T 1dhr_A 72 LGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAK 151 (241)
T ss_dssp HTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred hCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHH
Confidence 5899999999743211 13467889999999999987641 014899999987654433 7899999
Q ss_pred HHHHHHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.+.. ++++.+++||.+-.+ .... .... .....+++.+|+|++++.++..
T Consensus 152 ~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~---~~~~----~~~~---------~~~~~~~~~~~vA~~v~~l~~~ 215 (241)
T 1dhr_A 152 GAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP---MNRK----SMPE---------ADFSSWTPLEFLVETFHDWITG 215 (241)
T ss_dssp HHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH---HHHH----HSTT---------SCGGGSEEHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc---cccc----cCcc---------hhhccCCCHHHHHHHHHHHhcC
Confidence 9999988753 378899999988532 1111 1101 1123457789999999999976
Q ss_pred CCC-CCCceEEecCCc
Q 047628 211 DGT-SMGKIYELGGPD 225 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~ 225 (327)
... ..|+.+.+.+++
T Consensus 216 ~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 216 NKRPNSGSLIQVVTTD 231 (241)
T ss_dssp TTCCCTTCEEEEEEET
T ss_pred CCcCccceEEEEeCCC
Confidence 542 258888887754
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.9e-21 Score=163.83 Aligned_cols=215 Identities=15% Similarity=0.069 Sum_probs=150.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh-hccc-CCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH-LKLM-GDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++++++||||+|+||++++++|+++|++|+++.|+....... .... ....++.++.+|++|++++.++++ +
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGK 103 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999998654332111 1111 112468999999999998887775 6
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCC--CchHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSS--PSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~ 142 (327)
+|+|||+||...... ....+++|+.++.++++++.. .+ ..++|++||....... ...|+.+|.+.
T Consensus 104 id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~ 182 (269)
T 3gk3_A 104 VDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAFGQANYASAKAGI 182 (269)
T ss_dssp CSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHHHHH
T ss_pred CCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCCCcchHHHHHHHH
Confidence 899999999753221 134678999999888887643 44 5699999997554333 37899999998
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
+.+.+.. ++++.+++||.+..+....... ........ .......+.+.+|+|++++.++..... .
T Consensus 183 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~----~~~~~~~~~~p~dvA~~v~~L~s~~~~~i 255 (269)
T 3gk3_A 183 HGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ---DVLEAKIL----PQIPVGRLGRPDEVAALIAFLCSDDAGFV 255 (269)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------CCSG----GGCTTSSCBCHHHHHHHHHHHTSTTCTTC
T ss_pred HHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch---hHHHHHhh----hcCCcCCccCHHHHHHHHHHHhCCCcCCe
Confidence 8887643 4899999999998653322111 00000000 111223567899999999999986542 2
Q ss_pred CCceEEecCCcccc
Q 047628 215 MGKIYELGGPDIFT 228 (327)
Q Consensus 215 ~~~~~~v~~~~~~s 228 (327)
.|+++++.++..+|
T Consensus 256 tG~~i~vdgG~~~s 269 (269)
T 3gk3_A 256 TGADLAINGGMHMS 269 (269)
T ss_dssp CSCEEEESTTSCCC
T ss_pred eCcEEEECCCEeCc
Confidence 68999999986553
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=159.26 Aligned_cols=216 Identities=14% Similarity=0.067 Sum_probs=154.1
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc---CCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM---GDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
+.++.+++|||||+|.||++++++|+++|++|++++|+.++........ ....++.++.+|++|++++.++++
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER 83 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 4466789999999999999999999999999999999865533222211 112348899999999998887764
Q ss_pred ---cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 ---KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
.+|++||+||...... -...+++|+.++.++++++.. .+ -.++|++||.......+ ..|+.+
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 162 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEPHMVATSAA 162 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCTTBHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCCCchhhHHH
Confidence 5799999999753211 134678999999999998754 33 45899999987665444 789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChh-----------HHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL-----------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
|.+.+.+.+.. ++++..++||.+..+.... ...+..........+ ...+.+.+|+
T Consensus 163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~r~~~pedv 235 (265)
T 3lf2_A 163 RAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP-------LGRLGKPIEA 235 (265)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT-------TCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC-------cCCCcCHHHH
Confidence 99999887653 4899999999987531100 011111111111111 1246788999
Q ss_pred HHHHHHHhhcCCC-CCCceEEecCCcc
Q 047628 201 AAAVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 201 a~~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
|++++.++..... ..|+++++.++..
T Consensus 236 A~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 236 ARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp HHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred HHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 9999999875432 2689999998753
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-20 Score=160.66 Aligned_cols=195 Identities=15% Similarity=0.101 Sum_probs=144.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+++++||||||+|+||++++++|+++| ++|++++|+.+.... +... ....++.++.+|+++++++.++++
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~-~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHH-HHHhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence 556899999999999999999999999 999999998776432 2211 011468999999999998888776
Q ss_pred ----cccEEEEcccccc-c----c----CcchhHhhhhHHHHHHHHHHHHc----------CC----cceEEEEeccCCC
Q 047628 76 ----KANVVINLIGREY-E----T----RNYSFEDVNHFMAERIAGIAKEH----------GG----IMRFIQISCLGAS 128 (327)
Q Consensus 76 ----~~d~vi~~a~~~~-~----~----~~~~~~~~n~~~~~~l~~a~~~~----------~~----v~~~v~~Ss~~v~ 128 (327)
++|+|||+||... . . .....+++|+.++.++++++... +. ..+||++||....
T Consensus 98 ~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~ 177 (267)
T 1sny_A 98 TKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS 177 (267)
T ss_dssp HGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC
T ss_pred cCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEeccccc
Confidence 6999999999754 1 1 11346788999999999887543 10 2589999997664
Q ss_pred CC-----CCchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceeccee
Q 047628 129 SS-----SPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVY 196 (327)
Q Consensus 129 ~~-----~~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 196 (327)
.. ....|+.+|.+.|.+.+.+ ++++++++||.+..+.... ..+++
T Consensus 178 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------------~~~~~ 234 (267)
T 1sny_A 178 IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------------SAPLD 234 (267)
T ss_dssp STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------------TCSBC
T ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------------CCCCC
Confidence 33 2368999999999887653 5999999999886432110 13467
Q ss_pred HHHHHHHHHHHhhcCCCC-CCceEEecC
Q 047628 197 VVDVAAAVTAALKDDGTS-MGKIYELGG 223 (327)
Q Consensus 197 ~~D~a~~~~~~l~~~~~~-~~~~~~v~~ 223 (327)
.+|+|+.++.++...... .|..+.+.+
T Consensus 235 ~~~~a~~~~~~~~~~~~~~~G~~~~~~g 262 (267)
T 1sny_A 235 VPTSTGQIVQTISKLGEKQNGGFVNYDG 262 (267)
T ss_dssp HHHHHHHHHHHHHHCCGGGTTCEECTTS
T ss_pred HHHHHHHHHHHHHhcCcCCCCcEEccCC
Confidence 899999999999865421 465555555
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.85 E-value=9.3e-21 Score=162.27 Aligned_cols=211 Identities=15% Similarity=0.114 Sum_probs=149.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh----cccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL----KLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~----~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
.+++++|+||||+|+||++++++|+++|++|++++|+.......+ ...+ .++.++.+|+++++++.++++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~ 103 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKG--YKAAVIKFDAASESDFIEAIQTIVQ 103 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHH
Confidence 345679999999999999999999999999999999654432222 1222 468899999999998887775
Q ss_pred ---cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCC--CchHHHh
Q 047628 76 ---KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSS--PSRVFST 138 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~--~~~y~~~ 138 (327)
++|+|||+||...... ....+++|+.++.++++++. +.+ ..++|++||....... ...|+.+
T Consensus 104 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 182 (271)
T 4iin_A 104 SDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNMGQTNYSAS 182 (271)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred hcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCCCchHhHHH
Confidence 5899999999754321 13567889998888877764 344 5799999997553222 3789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
|.+.+.+.+.. ++++.+++||.+..+....+.. ... ...........+.+.+|+|++++.++...
T Consensus 183 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~-----~~~~~~~~~~~~~~p~dvA~~i~~l~s~~ 254 (271)
T 4iin_A 183 KGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD---ELK-----ADYVKNIPLNRLGSAKEVAEAVAFLLSDH 254 (271)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------------CGGGCTTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH---HHH-----HHHHhcCCcCCCcCHHHHHHHHHHHhCCC
Confidence 99999887653 4889999999987653221111 000 00011112235678999999999999765
Q ss_pred CC-CCCceEEecCCc
Q 047628 212 GT-SMGKIYELGGPD 225 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~ 225 (327)
.. ..|+++++.++.
T Consensus 255 ~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 255 SSYITGETLKVNGGL 269 (271)
T ss_dssp GTTCCSCEEEESTTS
T ss_pred cCCCcCCEEEeCCCe
Confidence 32 268999999864
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-20 Score=161.49 Aligned_cols=211 Identities=18% Similarity=0.138 Sum_probs=151.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+..... +...+ .++.++.+|+++++++.++++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhC--CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3467999999999999999999999999999999986432111 22222 468899999999988877664
Q ss_pred --cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHc--CCcceEEEEeccCCCCCC---CchHHHhHH
Q 047628 76 --KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEH--GGIMRFIQISCLGASSSS---PSRVFSTKA 140 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~--~~v~~~v~~Ss~~v~~~~---~~~y~~~K~ 140 (327)
++|+|||+||..... .....+++|+.++.++++++... + ..++|++||....... ...|+.+|.
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~asK~ 183 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKAVPKHAVYSGSKG 183 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCCCCCCcchHHHHH
Confidence 579999999975321 11356889999999999998875 4 5699999997664332 368999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhH------------HHHHHHHhhcCceeeecCCCceecceeHHHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLL------------NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 201 (327)
+.+.+.+.. ++++.+++||.+.++..... ............. ....+.+.+|+|
T Consensus 184 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------p~~r~~~p~dvA 256 (283)
T 1g0o_A 184 AIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS-------PLRRVGLPIDIA 256 (283)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC-------TTCSCBCHHHHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC-------CCCCCcCHHHHH
Confidence 999887653 59999999999975411000 0011111100001 112467899999
Q ss_pred HHHHHHhhcCCC-CCCceEEecCCc
Q 047628 202 AAVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 202 ~~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
++++.++..... ..|+++++.++.
T Consensus 257 ~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 257 RVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHhCccccCcCCCEEEeCCCc
Confidence 999999976432 268899998864
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.1e-20 Score=160.96 Aligned_cols=215 Identities=16% Similarity=0.130 Sum_probs=154.7
Q ss_pred cCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++++++|||||+| .||++++++|+++|++|++++|+.+............+.+.++++|++|++++.++++
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4467999999998 9999999999999999999999864321111111111346889999999999888775
Q ss_pred cccEEEEccccccc---------cC---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 KANVVINLIGREYE---------TR---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ~~d~vi~~a~~~~~---------~~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
++|++||+||.... .+ ....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|.
T Consensus 108 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~asKa 187 (296)
T 3k31_A 108 SLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVCKA 187 (296)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHHHH
T ss_pred CCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHHHH
Confidence 47999999997532 11 13577889999999999987653 124899999987654444 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+++.+.+.. ++++.+++||.+..+..... .......... .+. ..+...+|+|++++.++..
T Consensus 188 al~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~pedvA~~v~fL~s~ 258 (296)
T 3k31_A 188 ALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYN--SPL-------RRNTTLDDVGGAALYLLSD 258 (296)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHH--STT-------SSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhc--CCC-------CCCCCHHHHHHHHHHHcCC
Confidence 999887654 48999999999987643221 1222222211 111 2356779999999999986
Q ss_pred CCC-CCCceEEecCCcccc
Q 047628 211 DGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~s 228 (327)
... ..|+++++.++..+.
T Consensus 259 ~a~~itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 259 LGRGTTGETVHVDCGYHVV 277 (296)
T ss_dssp GGTTCCSCEEEESTTGGGC
T ss_pred ccCCccCCEEEECCCcccc
Confidence 432 268999999986543
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-20 Score=157.47 Aligned_cols=209 Identities=19% Similarity=0.158 Sum_probs=151.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+..+++|||||+|+||++++++|+++|++|+++.|+....... +...+ .++.++.+|++|++++.++++
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999999988765432221 22222 468899999999999887775
Q ss_pred --cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHcCCcc--eEEEEeccCC-CCC--CCchHHHhHH
Q 047628 76 --KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEHGGIM--RFIQISCLGA-SSS--SPSRVFSTKA 140 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~~~v~--~~v~~Ss~~v-~~~--~~~~y~~~K~ 140 (327)
.+|++||+||...... ....+++|+.++.++++++...- .+ ++|++||... ... ....|+.+|.
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~~Y~asKa 172 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHL-TEGGRIVLTSSNTSKDFSVPKHSLYSGSKG 172 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHC-CTTCEEEEECCTTTTTCCCTTCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hcCCeEEEEeCchhccCCCCCCchhHHHHH
Confidence 5799999999753211 13567899999999999988764 33 8999999763 222 2378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChh-------------HHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRL-------------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
+.+.+.+.. ++++..++||.+..+.... ........... . ....+.+.+|+
T Consensus 173 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------p~~r~~~p~dv 243 (270)
T 3is3_A 173 AVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA--S-------PLHRNGWPQDV 243 (270)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH--S-------TTCSCBCHHHH
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc--C-------CCCCCCCHHHH
Confidence 999887653 5999999999998653210 01111111111 1 11245678999
Q ss_pred HHHHHHHhhcCCC-CCCceEEecCCc
Q 047628 201 AAAVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 201 a~~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
|++++.++..... ..|+++++.++.
T Consensus 244 A~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 244 ANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHcCCccCCccCcEEEeCCCC
Confidence 9999999975432 268999998864
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.2e-21 Score=162.03 Aligned_cols=210 Identities=11% Similarity=0.017 Sum_probs=148.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCC--CChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNP--RDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl--~~~~~~~~~~~----- 75 (327)
++.++++||||+|.||++++++|+++|++|++++|+.+.......... ...++.++.+|+ ++++++.++++
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 446899999999999999999999999999999998755332222110 012578899999 88888877765
Q ss_pred --cccEEEEcccccccc------Cc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 --KANVVINLIGREYET------RN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~------~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
.+|++||+||..... +. ...+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~as 168 (252)
T 3f1l_A 90 YPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAAS 168 (252)
T ss_dssp CSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCCCCchhHHH
Confidence 579999999974221 11 346789999999999987 4444 57999999987654443 689999
Q ss_pred HHHHHHHHHhhC------CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 139 KAAAEEAVLREL------PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 139 K~~~E~~~~~~~------~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
|.+.+.+.+... +++..+.||.+.. .... .... ......+.+.+|+|.+++.++....
T Consensus 169 K~a~~~l~~~la~e~~~~irvn~v~PG~v~t---~~~~----~~~~---------~~~~~~~~~p~dva~~~~~L~s~~~ 232 (252)
T 3f1l_A 169 KFATEGMMQVLADEYQQRLRVNCINPGGTRT---AMRA----SAFP---------TEDPQKLKTPADIMPLYLWLMGDDS 232 (252)
T ss_dssp HHHHHHHHHHHHHHTTTTCEEEEEECCSBSS---HHHH----HHCT---------TCCGGGSBCTGGGHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHHHHhcCCcEEEEEecCcccC---chhh----hhCC---------ccchhccCCHHHHHHHHHHHcCccc
Confidence 999998876542 7788899988752 1111 1110 1112346778999999999987654
Q ss_pred C-CCCceEEecCCccccHHH
Q 047628 213 T-SMGKIYELGGPDIFTVHE 231 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~~s~~e 231 (327)
. ..|+.+++.++...++.|
T Consensus 233 ~~itG~~i~vdgG~~~~~~q 252 (252)
T 3f1l_A 233 RRKTGMTFDAQPGRKPGISQ 252 (252)
T ss_dssp TTCCSCEEESSCC-------
T ss_pred cCCCCCEEEeCCCcCCCCCC
Confidence 2 268999999988766543
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=155.66 Aligned_cols=195 Identities=14% Similarity=0.057 Sum_probs=146.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---cccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---KANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~vi 81 (327)
++++++|||||+|+||++++++|+++|++|++++|+.+ +|++|++++.++++ ++|++|
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~~g~id~lv 64 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------LDISDEKSVYHYFETIGAFDHLI 64 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------CCTTCHHHHHHHHHHHCSEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------cCCCCHHHHHHHHHHhCCCCEEE
Confidence 45688999999999999999999999999999988632 79999999888875 579999
Q ss_pred Ecccccccc------C---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh
Q 047628 82 NLIGREYET------R---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 82 ~~a~~~~~~------~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~ 149 (327)
|+||..... + ....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|.+.+.+.+..
T Consensus 65 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~l 144 (223)
T 3uce_A 65 VTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVL 144 (223)
T ss_dssp ECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred ECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHH
Confidence 999975221 1 13467889999999999987752 013899999987765444 78999999999887654
Q ss_pred ----C-CCeEEEecCeeecCCCh-h----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceE
Q 047628 150 ----L-PWATIMRPAAMIGTEDR-L----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIY 219 (327)
Q Consensus 150 ----~-~~~~i~r~~~~~G~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~ 219 (327)
+ +++..++||.+..+... . ...+....... .+ ...+.+.+|+|++++.+++.+.. .|+++
T Consensus 145 a~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~dvA~~~~~l~~~~~~-tG~~i 214 (223)
T 3uce_A 145 AKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSH--LP-------VGKVGEASDIAMAYLFAIQNSYM-TGTVI 214 (223)
T ss_dssp HHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHH--ST-------TCSCBCHHHHHHHHHHHHHCTTC-CSCEE
T ss_pred HHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhc--CC-------CCCccCHHHHHHHHHHHccCCCC-CCcEE
Confidence 2 88999999999865211 1 11111112111 11 13467889999999999986555 79999
Q ss_pred EecCCcccc
Q 047628 220 ELGGPDIFT 228 (327)
Q Consensus 220 ~v~~~~~~s 228 (327)
++.++..++
T Consensus 215 ~vdgG~~~s 223 (223)
T 3uce_A 215 DVDGGALLG 223 (223)
T ss_dssp EESTTGGGC
T ss_pred EecCCeecC
Confidence 999986553
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.5e-21 Score=165.10 Aligned_cols=222 Identities=14% Similarity=0.081 Sum_probs=154.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc--------hh-------hhcccCCCCCeeEEeeCCCChhH
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--------PR-------HLKLMGDLGQIVPMKFNPRDDNT 69 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--------~~-------~~~~~~~~~~v~~~~~Dl~~~~~ 69 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.... .. .+... ..++.++.+|++++++
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~ 85 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT--GRKAYTAEVDVRDRAA 85 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT--TSCEEEEECCTTCHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc--CCceEEEEccCCCHHH
Confidence 3468999999999999999999999999999999874321 11 11111 2468899999999999
Q ss_pred HHHHhc-------cccEEEEcccccccc------CcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCC------
Q 047628 70 IKATMA-------KANVVINLIGREYET------RNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASS------ 129 (327)
Q Consensus 70 ~~~~~~-------~~d~vi~~a~~~~~~------~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~------ 129 (327)
+.++++ ++|++||+||..... .....+++|+.++.++++++...- +-.++|++||.....
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~ 165 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPP 165 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccc
Confidence 887775 689999999975321 124578999999999999987652 134899999964421
Q ss_pred ---CC--C--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh--cCc-----eeeecCC
Q 047628 130 ---SS--P--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK--FNF-----FPLFGDG 188 (327)
Q Consensus 130 ---~~--~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~--~~~-----~~~~~~~ 188 (327)
.. + ..|+.+|.+.+.+.+.. ++++.+++||.+..+.............. .+. .......
T Consensus 166 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (287)
T 3pxx_A 166 GAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFPAMQ 245 (287)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHGGGGC
T ss_pred cccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhhhhhhc
Confidence 11 2 57999999999887653 59999999999987643222111111000 000 0000011
Q ss_pred CceecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCcccc
Q 047628 189 STRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 189 ~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
.....+.+.+|+|++++.++..... ..|+++++.++..++
T Consensus 246 ~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 246 AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred ccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 1225678999999999999975432 268999999986654
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.8e-20 Score=155.77 Aligned_cols=205 Identities=16% Similarity=0.089 Sum_probs=143.5
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCC-ChhHHHHHhccccEEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR-DDNTIKATMAKANVVIN 82 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~d~vi~ 82 (327)
.+.++++|||||+|+||++++++|+++|++|++++|+.+. .... .++.++ +|+. +.+.+.+.+.++|+|||
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~----~~~~---~~~~~~-~D~~~~~~~~~~~~~~iD~lv~ 87 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRS---GHRYVV-CDLRKDLDLLFEKVKEVDILVL 87 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHT---CSEEEE-CCTTTCHHHHHHHSCCCSEEEE
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH----HHhh---CCeEEE-eeHHHHHHHHHHHhcCCCEEEE
Confidence 3557899999999999999999999999999999998622 2222 246677 9992 23444444457899999
Q ss_pred cccccccc-----C---cchhHhhhhHHHHHHH----HHHHHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHh
Q 047628 83 LIGREYET-----R---NYSFEDVNHFMAERIA----GIAKEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 83 ~a~~~~~~-----~---~~~~~~~n~~~~~~l~----~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~ 148 (327)
+||..... . -...+++|+.++.++. +.+++.+ ..++|++||..++...+ ..|+.+|.+.+.+.+.
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~ 166 (249)
T 1o5i_A 88 NAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFLKT 166 (249)
T ss_dssp CCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHH
Confidence 99974321 1 1346678888766554 4555666 68999999987765444 6899999999887764
Q ss_pred h-------CCCeEEEecCeeecCCChhH-HHHHH-HHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCce
Q 047628 149 E-------LPWATIMRPAAMIGTEDRLL-NKWAQ-FVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKI 218 (327)
Q Consensus 149 ~-------~~~~~i~r~~~~~G~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~ 218 (327)
. ++++.+++||.+.++..... ..... .... ..+ ...+.+.+|+|++++.++..... ..|+.
T Consensus 167 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~--~~p-------~~~~~~~~dvA~~i~~l~s~~~~~~tG~~ 237 (249)
T 1o5i_A 167 LSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVES--QIP-------MRRMAKPEEIASVVAFLCSEKASYLTGQT 237 (249)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHT--TST-------TSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred HHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHh--cCC-------CCCCcCHHHHHHHHHHHcCccccCCCCCE
Confidence 3 58999999999987642211 11111 1111 111 13467899999999998876432 25889
Q ss_pred EEecCCcc
Q 047628 219 YELGGPDI 226 (327)
Q Consensus 219 ~~v~~~~~ 226 (327)
|++.++..
T Consensus 238 ~~vdgG~~ 245 (249)
T 1o5i_A 238 IVVDGGLS 245 (249)
T ss_dssp EEESTTCC
T ss_pred EEECCCcc
Confidence 99998753
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=160.46 Aligned_cols=197 Identities=18% Similarity=0.040 Sum_probs=137.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
+++++|||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|++|++++.++++ ++|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG--DDALCVPTDVTDPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT--SCCEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999999999999999999999999999998765443333333 468899999999999888776 689
Q ss_pred EEEEcccccccc------Cc---chhHhhhhHHHHHHHHHHHHc----C-CcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 79 VVINLIGREYET------RN---YSFEDVNHFMAERIAGIAKEH----G-GIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 79 ~vi~~a~~~~~~------~~---~~~~~~n~~~~~~l~~a~~~~----~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
++||+||..... +. ...+++|+.++.++.+++... + +-.++|++||.......+ ..|+.+|.+.
T Consensus 105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~ 184 (272)
T 4dyv_A 105 VLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAI 184 (272)
T ss_dssp EEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHH
Confidence 999999974321 11 357789999988888876542 1 024899999987765444 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.+.. ++++.+++||.+..+....+. ..... . . .......+.+++|+|++++.++..+..
T Consensus 185 ~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~---~-~--~~~~~~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 185 TGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMK---AGVPQ---A-D--LSIKVEPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------------CHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHhCccCEEEEEEEECcccChhhhhhc---ccchh---h-h--hcccccCCCCHHHHHHHHHHHhCCCCc
Confidence 9887653 488999999998754221111 00000 0 0 011223468999999999999997765
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=4e-20 Score=158.15 Aligned_cols=210 Identities=18% Similarity=0.127 Sum_probs=150.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+..+++|||||+|+||++++++|+++|++|+++.|+....... +...+ .++.++.+|++|++++.++++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4467899999999999999999999999999997765332211 22222 468899999999999888776
Q ss_pred --cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCC-C--CCCchHHHhHHH
Q 047628 76 --KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGAS-S--SSPSRVFSTKAA 141 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~-~--~~~~~y~~~K~~ 141 (327)
++|++||+||...... -...+++|+.++.++++++...- +-.++|++||.... . .....|+.+|.+
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa 186 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAA 186 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHH
Confidence 6899999999753211 13567899999999999987651 13589999885443 2 223789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.+.+.. ++++.+++||.+..+............... .+ ...+.+.+|+|++++.++.....
T Consensus 187 ~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~--~~-------~~r~~~pedvA~~v~fL~s~~~~~ 257 (271)
T 3v2g_A 187 LAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQRER--IA-------TGSYGEPQDIAGLVAWLAGPQGKF 257 (271)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHHHHT--CT-------TSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHHHhc--CC-------CCCCCCHHHHHHHHHHHhCcccCC
Confidence 99887653 599999999999876321111111111111 11 12356789999999999865432
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..|+++++.++.
T Consensus 258 itG~~i~vdGG~ 269 (271)
T 3v2g_A 258 VTGASLTIDGGA 269 (271)
T ss_dssp CCSCEEEESTTT
T ss_pred ccCCEEEeCcCc
Confidence 268999998864
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=161.45 Aligned_cols=214 Identities=14% Similarity=0.137 Sum_probs=152.0
Q ss_pred cCCcEEEEEcCCCc--cHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGF--LGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~--iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.+++|||||+|+ ||++++++|+++|++|+++.|+.... ..+... ...+++.++.+|++|++++.++++
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALK-KRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHH-HHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 34578999999998 99999999999999999999984321 111111 011358899999999999887775
Q ss_pred -cccEEEEccccccc---------cC---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYE---------TR---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~---------~~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+||.... .. -...+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asK 187 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAK 187 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHH
Confidence 57999999997531 11 13477899999999999987642 124899999987664443 7899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.+.+.+.. ++++.+++||.+..+.... ........... .+. ..+.+.+|+|++++.++.
T Consensus 188 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~p~-------~r~~~pedvA~~v~~L~s 258 (293)
T 3grk_A 188 AALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYN--APL-------RRTVTIDEVGDVGLYFLS 258 (293)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHH--STT-------SSCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhc--CCC-------CCCCCHHHHHHHHHHHcC
Confidence 9999887653 4899999999998653211 12222222211 111 235678999999999987
Q ss_pred cCCC-CCCceEEecCCcccc
Q 047628 210 DDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~~~s 228 (327)
.... ..|+++++.++..++
T Consensus 259 ~~~~~itG~~i~vdGG~~~~ 278 (293)
T 3grk_A 259 DLSRSVTGEVHHADSGYHVI 278 (293)
T ss_dssp GGGTTCCSCEEEESTTGGGB
T ss_pred ccccCCcceEEEECCCcccC
Confidence 6432 268999999986543
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.8e-20 Score=157.74 Aligned_cols=208 Identities=15% Similarity=0.083 Sum_probs=149.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+++++||||+|.||++++++|+++| +.|+++.|+.+.........+ .++.++.+|++|++++.++++ .+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG--DRFFYVVGDITEDSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG--GGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC--CceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence 4789999999999999999999985 789999998655333222222 368899999999998887775 57
Q ss_pred cEEEEccccccc-c-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 78 NVVINLIGREYE-T-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 78 d~vi~~a~~~~~-~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
|++||+||.... . + -...+++|+.++.++++++ ++.+ .++|++||.......+ ..|+.+|.+.
T Consensus 80 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a~ 157 (254)
T 3kzv_A 80 DSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFSSWGAYGSSKAAL 157 (254)
T ss_dssp CEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSCCSHHHHHHHHHH
T ss_pred cEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCCCcchHHHHHHHH
Confidence 999999997432 1 1 1347789999999999887 4444 5899999987765444 7899999999
Q ss_pred HHHHHhh-----CCCeEEEecCeeecCCChh----------HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 143 EEAVLRE-----LPWATIMRPAAMIGTEDRL----------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 143 E~~~~~~-----~~~~~i~r~~~~~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+.+.+.. ++++..++||.+..+.... -.......... .+ ...+.+.+|+|++++.+
T Consensus 158 ~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------~~r~~~p~dva~~v~~L 228 (254)
T 3kzv_A 158 NHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGL--KE-------NNQLLDSSVPATVYAKL 228 (254)
T ss_dssp HHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHH--HT-------TC----CHHHHHHHHHH
T ss_pred HHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHH--Hh-------cCCcCCcccHHHHHHHH
Confidence 9888754 4899999999998763210 11111111111 11 12456779999999999
Q ss_pred hhcCC-C-CCCceEEecCCccc
Q 047628 208 LKDDG-T-SMGKIYELGGPDIF 227 (327)
Q Consensus 208 l~~~~-~-~~~~~~~v~~~~~~ 227 (327)
+.... . ..|+.+++.+++..
T Consensus 229 ~s~~~~~~itG~~i~vdg~~~~ 250 (254)
T 3kzv_A 229 ALHGIPDGVNGQYLSYNDPALA 250 (254)
T ss_dssp HHHCCCGGGTTCEEETTCGGGG
T ss_pred HhhcccCCCCccEEEecCcccc
Confidence 98763 2 27899999987644
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.8e-20 Score=156.83 Aligned_cols=212 Identities=11% Similarity=0.078 Sum_probs=152.0
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+++++++||||+ |+||+++++.|+++|++|++++|+.+ ....+.... ..+++.++.+|+++++++.++++
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 82 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 456899999999 99999999999999999999999875 222222110 01247889999999998887775
Q ss_pred -cccEEEEccccccc--------c-C---cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYE--------T-R---NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~--------~-~---~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|++||+||.... . . ....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 162 (275)
T 2pd4_A 83 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAK 162 (275)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred CCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHH
Confidence 57999999997532 1 1 13577899999999999997751 014899999976654333 6799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.+.+.+.. ++++.+++||.+.++.... ...+........ +. ..+.+.+|+|++++.++.
T Consensus 163 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~-------~~~~~p~dva~~~~~l~s 233 (275)
T 2pd4_A 163 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINA--PL-------RKNVSLEEVGNAGMYLLS 233 (275)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHS--TT-------SSCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcC--Cc-------CCCCCHHHHHHHHHHHhC
Confidence 9999887653 5999999999998764221 122222222111 11 134678999999999987
Q ss_pred cCC-CCCCceEEecCCcc
Q 047628 210 DDG-TSMGKIYELGGPDI 226 (327)
Q Consensus 210 ~~~-~~~~~~~~v~~~~~ 226 (327)
... ...|+.+++.++..
T Consensus 234 ~~~~~~tG~~~~vdgg~~ 251 (275)
T 2pd4_A 234 SLSSGVSGEVHFVDAGYH 251 (275)
T ss_dssp GGGTTCCSCEEEESTTGG
T ss_pred ccccCCCCCEEEECCCcc
Confidence 532 22688999988753
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7e-20 Score=154.66 Aligned_cols=205 Identities=16% Similarity=0.097 Sum_probs=144.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~v 80 (327)
|+++||||+|+||+++++.|+++|++|++++|+.+.......... .++.++.+|+++++++.++++ ++|++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 78 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG--DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL 78 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 579999999999999999999999999999998654332222222 358899999999999988875 57999
Q ss_pred EEccccccc------cC---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 81 INLIGREYE------TR---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 81 i~~a~~~~~------~~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
||+||.... .+ ....+++|+.++.++.+++. +.+ ..++|++||.......+ ..|+.+|.+.+.+
T Consensus 79 vnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~ 157 (248)
T 3asu_A 79 VNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQF 157 (248)
T ss_dssp EECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred EECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCCCCchHHHHHHHHHHH
Confidence 999997421 11 13477899999888888775 444 57999999987654433 6899999999998
Q ss_pred HHhh-------CCCeEEEecCeeec-CCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 146 VLRE-------LPWATIMRPAAMIG-TEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
.+.. ++++.+++||.+.| +..... +... . ....... ....+++.+|+|++++.++..+....++
T Consensus 158 ~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~~~~-~-~~~~~~~----~~~~~~~p~dvA~~v~~l~s~~~~~~g~ 229 (248)
T 3asu_A 158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--FKGD-D-GKAEKTY----QNTVALTPEDVSEAVWWVSTLPAHVNIN 229 (248)
T ss_dssp HHHHHHHTTTSCCEEEEEEECSBCC------------------------------CCBCHHHHHHHHHHHHHSCTTCCCC
T ss_pred HHHHHHHhhhcCcEEEEEeccccccCcchhhc--ccCc-h-HHHHHHH----hccCCCCHHHHHHHHHHHhcCCccceee
Confidence 7653 48999999999984 321100 0000 0 0000000 0123468999999999999876544677
Q ss_pred eEEecC
Q 047628 218 IYELGG 223 (327)
Q Consensus 218 ~~~v~~ 223 (327)
.+.+.+
T Consensus 230 ~i~v~~ 235 (248)
T 3asu_A 230 TLEMMP 235 (248)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 777665
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-21 Score=163.30 Aligned_cols=200 Identities=19% Similarity=0.146 Sum_probs=139.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.+++|||||+|+||+++++.|+++|++|++++|+.++.... +...+...++.++.+|+++++++.++++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 109 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 109 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhC
Confidence 3457899999999999999999999999999999986543221 1111111357889999999999887775
Q ss_pred -cccEEEEccccccccC--------cchhHhhhhHH----HHHHHHHHHHcCCc--ceEEEEeccCCCCC--CC--chHH
Q 047628 76 -KANVVINLIGREYETR--------NYSFEDVNHFM----AERIAGIAKEHGGI--MRFIQISCLGASSS--SP--SRVF 136 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~--------~~~~~~~n~~~----~~~l~~a~~~~~~v--~~~v~~Ss~~v~~~--~~--~~y~ 136 (327)
++|+|||+||...... ....+++|+.+ ++.+++++++.+ + .++|++||...... .+ ..|+
T Consensus 110 g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~~~~~~~Y~ 188 (279)
T 1xg5_A 110 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVLPLSVTHFYS 188 (279)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCCSCGGGHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcccCCCCCCchhH
Confidence 6899999999743211 13467889888 677777777776 5 69999999877632 22 6799
Q ss_pred HhHHHHHHHHHh---------hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 137 STKAAAEEAVLR---------ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 137 ~~K~~~E~~~~~---------~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
.+|.+.+.+.+. .++++.+++||.+.++.. ... .. ....... .......+++.+|+|++++.+
T Consensus 189 ~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~---~~~---~~-~~~~~~~-~~~~~~~~~~~~dvA~~i~~l 260 (279)
T 1xg5_A 189 ATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA---FKL---HD-KDPEKAA-ATYEQMKCLKPEDVAEAVIYV 260 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHH---HHH---TT-TCHHHHH-HHHC---CBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhh---hhh---cc-cChhHHh-hhcccccCCCHHHHHHHHHHH
Confidence 999998877653 248899999999875421 100 00 0000000 000113468899999999999
Q ss_pred hhcCCC
Q 047628 208 LKDDGT 213 (327)
Q Consensus 208 l~~~~~ 213 (327)
+..+..
T Consensus 261 ~~~~~~ 266 (279)
T 1xg5_A 261 LSTPAH 266 (279)
T ss_dssp HHSCTT
T ss_pred hcCCcc
Confidence 987654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=160.12 Aligned_cols=190 Identities=12% Similarity=0.023 Sum_probs=140.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+++++++||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++ +
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 456899999999999999999999999999999998654322211110 11468899999999998887775 5
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|+|||+||...... ....+++|+.++.++++++. +.+ ..+||++||...+...+ ..|+.+|.+.
T Consensus 109 iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~ 187 (272)
T 1yb1_A 109 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAA 187 (272)
T ss_dssp CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHHHHH
T ss_pred CcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCchhHHHHHHHH
Confidence 899999999753211 13567889999777777653 455 67999999987765444 6799999999
Q ss_pred HHHHHhh----------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 143 EEAVLRE----------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 143 E~~~~~~----------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
|.+.+.. ++++++++||.+.++.... . . .....+++.+|+|++++.++..+.
T Consensus 188 ~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~-----------~-~------~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 188 VGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN-----------P-S------TSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC-----------T-H------HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc-----------c-c------ccccCCCCHHHHHHHHHHHHHcCC
Confidence 8887542 5889999999887653110 0 0 011346889999999999998765
Q ss_pred C
Q 047628 213 T 213 (327)
Q Consensus 213 ~ 213 (327)
.
T Consensus 250 ~ 250 (272)
T 1yb1_A 250 K 250 (272)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=160.17 Aligned_cols=211 Identities=11% Similarity=0.007 Sum_probs=151.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------~~ 77 (327)
+.+++++||||+|.||++++++|+++|++|++++|+.+.......... ...++..+.+|+++++++.++++ ++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 446899999999999999999999999999999998876543332211 12468999999999988887775 57
Q ss_pred cEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||..... +. ...+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~ 189 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPKSVVTAYAATKAAQH 189 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCchhhHHHHHHHH
Confidence 9999999974321 11 346789999999998887 3344 56999999987765444 55999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhH----HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLL----NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.+.. ++++..++||.+..+..... ........... .++ ..+...+|+|++++.++....
T Consensus 190 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~p~-------~r~~~pedvA~~v~fL~s~~a 261 (275)
T 4imr_A 190 NLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTL-NWM-------GRAGRPEEMVGAALFLASEAC 261 (275)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHH-STT-------CSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhc-Ccc-------CCCcCHHHHHHHHHHHcCccc
Confidence 887653 48899999999874311100 01111111000 011 134567999999999987643
Q ss_pred C-CCCceEEecCC
Q 047628 213 T-SMGKIYELGGP 224 (327)
Q Consensus 213 ~-~~~~~~~v~~~ 224 (327)
. ..|+++++.++
T Consensus 262 ~~itG~~i~vdGG 274 (275)
T 4imr_A 262 SFMTGETIFLTGG 274 (275)
T ss_dssp TTCCSCEEEESSC
T ss_pred CCCCCCEEEeCCC
Confidence 2 26899999875
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.84 E-value=5.6e-20 Score=158.83 Aligned_cols=213 Identities=13% Similarity=0.079 Sum_probs=150.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC-CCchhhhccc--CCCCCeeEEeeCCCC----hhHHHHHhc--
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC-EDDPRHLKLM--GDLGQIVPMKFNPRD----DNTIKATMA-- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~~~~~~~~--~~~~~v~~~~~Dl~~----~~~~~~~~~-- 75 (327)
++.++++||||+|+||++++++|+++|++|++++|+. +......... ....++.++.+|+++ ++++.++++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 4568999999999999999999999999999999987 4322211111 011468899999999 888877765
Q ss_pred -----cccEEEEccccccccC--------------c----chhHhhhhHHHHHHHHHHHHcC---C------cceEEEEe
Q 047628 76 -----KANVVINLIGREYETR--------------N----YSFEDVNHFMAERIAGIAKEHG---G------IMRFIQIS 123 (327)
Q Consensus 76 -----~~d~vi~~a~~~~~~~--------------~----~~~~~~n~~~~~~l~~a~~~~~---~------v~~~v~~S 123 (327)
++|+|||+||...... . ...+++|+.++..+++++...- + ..++|++|
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is 180 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180 (288)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence 5899999999743211 0 2467889999999988876432 0 24899999
Q ss_pred ccCCCCCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecc
Q 047628 124 CLGASSSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQP 194 (327)
Q Consensus 124 s~~v~~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (327)
|.......+ ..|+.+|.+.+.+.+.. ++++.+++||.+.++. ............. .+. ..+
T Consensus 181 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~~~~~~~--~p~-------~r~ 250 (288)
T 2x9g_A 181 DAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEKDKWRRK--VPL-------GRR 250 (288)
T ss_dssp CTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHHHHHHHT--CTT-------TSS
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHHHHHHhh--CCC-------CCC
Confidence 987765444 67999999988877653 5899999999998775 2112111111111 111 123
Q ss_pred -eeHHHHHHHHHHHhhcCC-CCCCceEEecCCccc
Q 047628 195 -VYVVDVAAAVTAALKDDG-TSMGKIYELGGPDIF 227 (327)
Q Consensus 195 -i~~~D~a~~~~~~l~~~~-~~~~~~~~v~~~~~~ 227 (327)
.+.+|+|++++.++.... ...|+.+++.++..+
T Consensus 251 ~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 285 (288)
T 2x9g_A 251 EASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285 (288)
T ss_dssp CCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred CCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence 678999999999997643 226889999887543
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=158.64 Aligned_cols=192 Identities=15% Similarity=0.135 Sum_probs=138.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+..+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++ .
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 345899999999999999999999999999999998765332222110 11468899999999999887775 3
Q ss_pred ccEEEEccccccc------cC---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 77 ANVVINLIGREYE------TR---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~------~~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
+|+|||+||.... .. ....+++|+.++.++++++.. .+ ..+||++||.......+ ..|+.+|.+
T Consensus 107 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa 185 (262)
T 3rkr_A 107 CDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAYTASKWG 185 (262)
T ss_dssp CSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCTTCHHHHHHHHH
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCCCCchHHHHHHH
Confidence 7999999997221 11 134778999999998888643 44 57999999987765444 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.+.. ++++.+++||.+..+.... .. .......+++.+|+|++++.++.....
T Consensus 186 ~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~---------~~~~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 186 LNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG-------LS---------AKKSALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------CCCHHHHHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc-------cc---------cccccccCCCHHHHHHHHHHHhcCccc
Confidence 98887643 5999999999886432110 00 001123467899999999999987553
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=5.2e-20 Score=155.39 Aligned_cols=203 Identities=15% Similarity=0.121 Sum_probs=143.6
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
|+..+++++++||||+|.||++++++|+++|++|++++|+.+.......... ...++.++.+|+++++++.++++
T Consensus 1 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 1 MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp --CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 5666777899999999999999999999999999999998654322221110 11468899999999998887765
Q ss_pred ---cccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHHcC---CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 ---KANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKEHG---GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~~---~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|++||+||..... +. ...+++|+.++.++++++...- + .++|++||.......+ ..|+.+|
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~Y~asK 159 (247)
T 2jah_A 81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNVRNAAVYQATK 159 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCCTTCHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCCCCCcHHHHHH
Confidence 589999999974321 11 3467899999999998875431 1 5999999987654443 6899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhH--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.+.. ++++.+++||.+..+..... ......... .+ + ++.+++.+|+|++++.++..
T Consensus 160 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~---~~--~----~~~~~~pedvA~~v~~l~s~ 230 (247)
T 2jah_A 160 FGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQ---RI--S----QIRKLQAQDIAEAVRYAVTA 230 (247)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHH---HT--T----TSCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHh---cc--c----ccCCCCHHHHHHHHHHHhCC
Confidence 9988877543 59999999999876521110 111111110 11 1 12258899999999999986
Q ss_pred CCC
Q 047628 211 DGT 213 (327)
Q Consensus 211 ~~~ 213 (327)
+..
T Consensus 231 ~~~ 233 (247)
T 2jah_A 231 PHH 233 (247)
T ss_dssp CTT
T ss_pred Ccc
Confidence 653
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.5e-20 Score=154.74 Aligned_cols=195 Identities=13% Similarity=0.042 Sum_probs=143.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---------K 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---------~ 76 (327)
+++++|||||+|+||++++++|+++|++|++++|+++... ....++.+|+++++++.++++ +
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~ 72 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ 72 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4578999999999999999999999999999999876532 135677999999988877765 6
Q ss_pred ccEEEEcccccccc---------CcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 77 ANVVINLIGREYET---------RNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 77 ~d~vi~~a~~~~~~---------~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
+|+|||+||..... .....+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|.+.+.
T Consensus 73 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~ 152 (236)
T 1ooe_A 73 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH 152 (236)
T ss_dssp EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHH
Confidence 89999999964311 113467889999999999987742 024899999987654433 789999999998
Q ss_pred HHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC--C
Q 047628 145 AVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG--T 213 (327)
Q Consensus 145 ~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~ 213 (327)
+.+.. ++++.+++||.+.++ .... .... .....+++.+|+|++++.++..+. .
T Consensus 153 ~~~~la~e~~~~~~gi~v~~v~Pg~v~t~---~~~~----~~~~---------~~~~~~~~~~dvA~~i~~~l~s~~~~~ 216 (236)
T 1ooe_A 153 LTSSLAAKDSGLPDNSAVLTIMPVTLDTP---MNRK----WMPN---------ADHSSWTPLSFISEHLLKWTTETSSRP 216 (236)
T ss_dssp HHHHHHSTTSSCCTTCEEEEEEESCBCCH---HHHH----HSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGCC
T ss_pred HHHHHHHHhcccCCCeEEEEEecCcccCc---chhh----cCCC---------ccccccCCHHHHHHHHHHHHcCCCccc
Confidence 87653 278899999988743 1111 1101 112345678999999997774322 1
Q ss_pred CCCceEEecCCc
Q 047628 214 SMGKIYELGGPD 225 (327)
Q Consensus 214 ~~~~~~~v~~~~ 225 (327)
..|+.+.+.++.
T Consensus 217 ~~G~~~~v~gg~ 228 (236)
T 1ooe_A 217 SSGALLKITTEN 228 (236)
T ss_dssp CTTCEEEEEEET
T ss_pred ccccEEEEecCC
Confidence 258888887754
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=8.3e-20 Score=157.06 Aligned_cols=212 Identities=13% Similarity=0.127 Sum_probs=153.2
Q ss_pred cCCcEEEEEcCCCc--cHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGF--LGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~--iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.++++||||+|+ ||++++++|+++|++|++++|+.... ...+.... +++.++.+|+++++++.++++
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELGKVW 101 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHHHHc
Confidence 34589999999977 99999999999999999999987111 11121211 358899999999998888775
Q ss_pred -cccEEEEccccccc----------cCc---chhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCCC--chHHH
Q 047628 76 -KANVVINLIGREYE----------TRN---YSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 -~~d~vi~~a~~~~~----------~~~---~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
.+|+|||+||.... ... ...+++|+.++.++++++...- ...++|++||.......+ ..|+.
T Consensus 102 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a 181 (280)
T 3nrc_A 102 DGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGV 181 (280)
T ss_dssp SSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHH
T ss_pred CCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHH
Confidence 36999999997532 111 3467899999999999886541 035899999987765444 78999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+|.+.+.+.+.. ++++.+++||.+..+.... ............ + ...+.+.+|+|++++.+
T Consensus 182 sKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~--p-------~~~~~~pedvA~~v~~l 252 (280)
T 3nrc_A 182 AKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVS--P-------LKKNVDIMEVGNTVAFL 252 (280)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHS--T-------TCSCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcC--C-------CCCCCCHHHHHHHHHHH
Confidence 999999887643 4999999999998763221 122222222111 1 12356789999999999
Q ss_pred hhcCCC-CCCceEEecCCccc
Q 047628 208 LKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~~~ 227 (327)
+..... ..|+++++.++..+
T Consensus 253 ~s~~~~~~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 253 CSDMATGITGEVVHVDAGYHC 273 (280)
T ss_dssp TSGGGTTCCSCEEEESTTGGG
T ss_pred hCcccCCcCCcEEEECCCccc
Confidence 986432 26899999997653
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-20 Score=160.29 Aligned_cols=208 Identities=11% Similarity=0.083 Sum_probs=151.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcc---cCCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKL---MGDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~---~~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
+.++++|||||+|.||++++++|+++|+ .|+++.|+.+........ .....++.++.+|++|++++.++++
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 110 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLP 110 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSC
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3467999999999999999999999987 999999987653322221 1112468899999999999988875
Q ss_pred ----cccEEEEcccccccc------C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHH
Q 047628 76 ----KANVVINLIGREYET------R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVF 136 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~------~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~ 136 (327)
++|++||+||..... . -...+++|+.++.++++++ ++.+ ..++|++||.......+ ..|+
T Consensus 111 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~ 189 (287)
T 3rku_A 111 QEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYPTGSIYC 189 (287)
T ss_dssp GGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHH
T ss_pred HhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCCCCchHH
Confidence 479999999975311 1 1357789999999999987 3444 56999999987654443 7899
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-----hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-----LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
.+|.+++.+.+.. ++++.+++||.+..+... .......... . ..+++.+|+|+++
T Consensus 190 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~----------~---~~p~~pedvA~~v 256 (287)
T 3rku_A 190 ASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYK----------D---TTPLMADDVADLI 256 (287)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHT----------T---SCCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhc----------c---cCCCCHHHHHHHH
Confidence 9999999887653 489999999999754210 0000000000 0 1234889999999
Q ss_pred HHHhhcCCC-CCCceEEecCCcc
Q 047628 205 TAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 205 ~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
+.++..+.. ..|+++++.+++.
T Consensus 257 ~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 257 VYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp HHHHTSCTTEEEEEEEEEETTEE
T ss_pred HHHhCCCCCeEecceEEeeCCCC
Confidence 999987653 2578888888664
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=158.38 Aligned_cols=208 Identities=17% Similarity=0.088 Sum_probs=145.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh----cccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL----KLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~----~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+.+++|||||+|.||++++++|+++|++|+++.++.......+ ...+ .++.++.+|+++++++.++++
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999866544322222 1222 468899999999998887775
Q ss_pred -cccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCC--CchHHHhHHHHH
Q 047628 76 -KANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSS--PSRVFSTKAAAE 143 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E 143 (327)
++|++||+||...... . ...+++|+.++.++++++...- +-.++|++||....... ...|+.+|.+.+
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~ 183 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVE 183 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHH
Confidence 5799999999753211 1 2466799999999999887642 02489999997654333 378999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
.+.+.. ++++..++||.+..+.... ......... .......+.+.+|+|++++.++.....
T Consensus 184 ~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~---------~~~p~~r~~~pedvA~~v~~L~s~~~~~ 254 (267)
T 3u5t_A 184 AMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFA---------KLAPLERLGTPQDIAGAVAFLAGPDGAW 254 (267)
T ss_dssp HHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHH---------TSSTTCSCBCHHHHHHHHHHHHSTTTTT
T ss_pred HHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 888754 4899999999887542110 001111111 111123567889999999999876542
Q ss_pred CCCceEEecCC
Q 047628 214 SMGKIYELGGP 224 (327)
Q Consensus 214 ~~~~~~~v~~~ 224 (327)
..|+++++.++
T Consensus 255 itG~~i~vdGG 265 (267)
T 3u5t_A 255 VNGQVLRANGG 265 (267)
T ss_dssp CCSEEEEESSS
T ss_pred ccCCEEEeCCC
Confidence 26889999886
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=160.97 Aligned_cols=192 Identities=13% Similarity=0.025 Sum_probs=142.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHh-CCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAK-MGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++++|+||||+|+||++++++|++ .|++|++++|+.+.......... ...++.++.+|+++++++.++++ +
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 457999999999999999999999 99999999998654322222110 01368899999999999888776 6
Q ss_pred ccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCC------------------
Q 047628 77 ANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASS------------------ 129 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~------------------ 129 (327)
+|+|||+||..... .....+++|+.++.++++++.... +..+||++||...+.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~ 162 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETI 162 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSC
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcccccc
Confidence 89999999975321 123568899999999999998763 023899999964420
Q ss_pred ------------------------C-CCchHHHhHHHHHHHHHh-----------hCCCeEEEecCeeecCCChhHHHHH
Q 047628 130 ------------------------S-SPSRVFSTKAAAEEAVLR-----------ELPWATIMRPAAMIGTEDRLLNKWA 173 (327)
Q Consensus 130 ------------------------~-~~~~y~~~K~~~E~~~~~-----------~~~~~~i~r~~~~~G~~~~~~~~~~ 173 (327)
. ....|+.+|.+.|.+.+. .++++.+++||.+.++....
T Consensus 163 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~----- 237 (276)
T 1wma_A 163 TEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP----- 237 (276)
T ss_dssp CHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-----
T ss_pred chhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-----
Confidence 0 127899999999887753 26899999999887542110
Q ss_pred HHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC---CCCCceEE
Q 047628 174 QFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG---TSMGKIYE 220 (327)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~---~~~~~~~~ 220 (327)
..+.+.+|+|+.++.++..+. ...|+.|.
T Consensus 238 ------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 238 ------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp ------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred ------------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence 135789999999999997552 22465555
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-20 Score=155.26 Aligned_cols=188 Identities=15% Similarity=0.049 Sum_probs=137.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
|+++++|||||+|+||++++++|+++|++|++++|+.++........+ .++.++.+|+++++++.++++ .+
T Consensus 1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG--NAVIGIVADLAHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 345789999999999999999999999999999998765433322222 258899999999998887775 47
Q ss_pred cEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||..... + ....+++|+.++.++++++.. .+ .++|++||.......+ ..|+.+|.+.+
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~~ 156 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGKANESLYCASKWGMR 156 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSCSSHHHHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCCCCCcHHHHHHHHHH
Confidence 9999999974321 1 135778999999988888754 23 3899999976654444 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++..++||.+-.+... .... . ....+.+.+|+|++++.++..+..
T Consensus 157 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~~~-------~-------~~~~~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 157 GFLESLRAELKDSPLRLVNLYPSGIRSEFWD---NTDH-------V-------DPSGFMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp HHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------CBCHHHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHhhccCCEEEEEeCCCccCcchh---ccCC-------C-------CCcCCCCHHHHHHHHHHHHhCCCC
Confidence 887754 488999999988644211 1000 0 112568899999999999986553
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.2e-20 Score=155.02 Aligned_cols=188 Identities=12% Similarity=0.034 Sum_probs=136.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccc----cEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA----NVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~----d~vi~ 82 (327)
|+++|||||+|+||++++++|+++|++|++++|+.+.........+ .++.++.+|+++++++.++++.+ |+|||
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS--NNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS--SCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh--hccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 3679999999999999999999999999999998765443333332 46889999999999999988764 89999
Q ss_pred ccccccccC--------cchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh-
Q 047628 83 LIGREYETR--------NYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE- 149 (327)
Q Consensus 83 ~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~- 149 (327)
+||...... -...+++|+.++.++++++...- .-.++|++||.......+ ..|+.+|.+.+.+.+..
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la 158 (230)
T 3guy_A 79 SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVR 158 (230)
T ss_dssp CCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred eCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 999743211 13467899999999999876542 012899999987765444 78999999999887654
Q ss_pred ------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 150 ------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 150 ------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
++++..++||.+..+. .... . ... ....+.+.+|+|++++.++.++.
T Consensus 159 ~e~~~~gi~v~~v~PG~v~t~~---~~~~----~--~~~-------~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 159 LELKGKPMKIIAVYPGGMATEF---WETS----G--KSL-------DTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp HHTTTSSCEEEEEEECCC--------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred HHHHhcCeEEEEEECCcccChH---HHhc----C--CCC-------CcccCCCHHHHHHHHHHHHhCcC
Confidence 4899999999886431 1110 0 011 12467889999999999998655
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.1e-20 Score=162.48 Aligned_cols=222 Identities=18% Similarity=0.134 Sum_probs=151.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc--------hhhhc----cc-CCCCCeeEEeeCCCChhHHH
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD--------PRHLK----LM-GDLGQIVPMKFNPRDDNTIK 71 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~--------~~~~~----~~-~~~~~v~~~~~Dl~~~~~~~ 71 (327)
+..+++|||||+|+||+++++.|+++|++|++++|+.... ...+. .. ....++.++.+|++|++++.
T Consensus 44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~ 123 (317)
T 3oec_A 44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ 123 (317)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 3457899999999999999999999999999998863221 11111 00 01246889999999999988
Q ss_pred HHhc-------cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC
Q 047628 72 ATMA-------KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP 132 (327)
Q Consensus 72 ~~~~-------~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~ 132 (327)
++++ .+|++||+||...... -...+++|+.++.++++++.. .+.-.+||++||.......+
T Consensus 124 ~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~ 203 (317)
T 3oec_A 124 AVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAP 203 (317)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCT
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCC
Confidence 8775 5899999999754211 134678999999999888743 22125799999987664444
Q ss_pred --chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhc---Cc----eeee-cCCCceecce
Q 047628 133 --SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKF---NF----FPLF-GDGSTRIQPV 195 (327)
Q Consensus 133 --~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~---~~----~~~~-~~~~~~~~~i 195 (327)
..|+.+|.+.+.+.+.. ++++.+++||.+.++..... ......... .. .... .....+..++
T Consensus 204 ~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 282 (317)
T 3oec_A 204 GQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE-KLLKMFLPHLENPTREDAAELFSQLTLLPIPWV 282 (317)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH-HHHHHHCTTCSSCCHHHHHHHHTTTCSSSSSSB
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch-hhhhhhhhhccccchhHHHHHHhhhccCCCCCC
Confidence 78999999999887653 58999999999975421100 000101000 00 0000 0111125678
Q ss_pred eHHHHHHHHHHHhhcCCC-CCCceEEecCCccc
Q 047628 196 YVVDVAAAVTAALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 196 ~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
+.+|+|++++.++..... ..|+++++.++...
T Consensus 283 ~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~ 315 (317)
T 3oec_A 283 EPEDVSNAVAWLASDEARYIHGAAIPVDGGQLA 315 (317)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred CHHHHHHHHHHHcCCcccCCCCCEEEECcchhh
Confidence 999999999999875432 26899999997643
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=158.41 Aligned_cols=207 Identities=12% Similarity=0.046 Sum_probs=143.4
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc---cC-CCCCeeEEeeCCCChhHHHHHhc-
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL---MG-DLGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~---~~-~~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
|++.++++++|||||+|.||++++++|+++|++|++++|+.++....... .. ...++.++.+|+++++++.++++
T Consensus 1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 80 (250)
T 3nyw_A 1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD 80 (250)
T ss_dssp ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence 66667788999999999999999999999999999999987653322221 11 11468899999999998887765
Q ss_pred ------cccEEEEccccccccC-------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCC-C-CCchHH
Q 047628 76 ------KANVVINLIGREYETR-------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASS-S-SPSRVF 136 (327)
Q Consensus 76 ------~~d~vi~~a~~~~~~~-------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~-~-~~~~y~ 136 (327)
.+|++||+||...... -...+++|+.++.++++++ ++.+ ..++|++||..... . ....|+
T Consensus 81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~ 159 (250)
T 3nyw_A 81 IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFADGGIYG 159 (250)
T ss_dssp HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------CCTTHHH
T ss_pred HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCCCCcchH
Confidence 4799999999743211 1356788999999888887 3344 56999999976543 2 237899
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+|.+.+.+.+.. ++++..++||.+..+ ... .. .... ....+++.+|+|++++.++.
T Consensus 160 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---~~~----~~--~~~~-------~~~~~~~p~dva~~v~~l~s 223 (250)
T 3nyw_A 160 STKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD---MAK----KA--GTPF-------KDEEMIQPDDLLNTIRCLLN 223 (250)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH---HHH----HT--TCCS-------CGGGSBCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc---hhh----hc--CCCc-------ccccCCCHHHHHHHHHHHHc
Confidence 9999998887653 489999999988632 111 11 1111 12357889999999999998
Q ss_pred cCCCC--CCceEEecCC
Q 047628 210 DDGTS--MGKIYELGGP 224 (327)
Q Consensus 210 ~~~~~--~~~~~~v~~~ 224 (327)
.+... .+-++.+.++
T Consensus 224 ~~~~~~~~~~~i~vd~~ 240 (250)
T 3nyw_A 224 LSENVCIKDIVFEMKKS 240 (250)
T ss_dssp SCTTEECCEEEEEEHHH
T ss_pred CCCceEeeEEEEEeecc
Confidence 66531 2334445443
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=7.2e-20 Score=153.40 Aligned_cols=202 Identities=15% Similarity=0.044 Sum_probs=145.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++++|||||+|+||++++++|+++|++|++++|+.++........ ....++.++.+|+++++++.++++ ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999999999999999999876533222111 011468899999999999988876 57
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHc---CCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEH---GGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~---~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
|++||+||...... ....+++|+.++.++++++... + ..++|++||.......+ ..|+.+|.+.+.
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~ 160 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLIPYGGGYVSTKWAARA 160 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCCTTCHHHHHHHHHHHH
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccCCCcchHHHHHHHHHH
Confidence 99999999753321 1357789999999999987542 1 24667666654433333 789999999999
Q ss_pred HHHhh-----CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC-CCce
Q 047628 145 AVLRE-----LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS-MGKI 218 (327)
Q Consensus 145 ~~~~~-----~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~-~~~~ 218 (327)
+.+.. ++++..++||.+-.+.... .. .......+++.+|+|++++.++..+... .+++
T Consensus 161 ~~~~l~~~~~~i~v~~v~PG~v~T~~~~~-------------~~---~~~~~~~~~~p~dva~~v~~l~~~~~~~~~~~~ 224 (235)
T 3l77_A 161 LVRTFQIENPDVRFFELRPGAVDTYFGGS-------------KP---GKPKEKGYLKPDEIAEAVRCLLKLPKDVRVEEL 224 (235)
T ss_dssp HHHHHHHHCTTSEEEEEEECSBSSSTTTC-------------CS---CCCGGGTCBCHHHHHHHHHHHHTSCTTCCCCEE
T ss_pred HHHHHhhcCCCeEEEEEeCCccccccccc-------------cC---CcccccCCCCHHHHHHHHHHHHcCCCCCccceE
Confidence 88764 5999999999886432110 00 0111225688999999999999987642 4555
Q ss_pred EEecCCc
Q 047628 219 YELGGPD 225 (327)
Q Consensus 219 ~~v~~~~ 225 (327)
....+++
T Consensus 225 ~~~~~~~ 231 (235)
T 3l77_A 225 MLRSVYQ 231 (235)
T ss_dssp EECCTTS
T ss_pred EEeeccc
Confidence 5555544
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.9e-20 Score=157.15 Aligned_cols=208 Identities=14% Similarity=0.101 Sum_probs=143.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-------ccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-------ANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-------~d~v 80 (327)
+++|||||+|+||++++++|+++|++|++++|+.+.............++.++.+|++|++++.++++. +|+|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 789999999999999999999999999999998654332222222113688999999999999988865 4999
Q ss_pred EEccccccc-c-----C---cchhHhhhhHHHHHHHHHHH----HcCCcc-eEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 81 INLIGREYE-T-----R---NYSFEDVNHFMAERIAGIAK----EHGGIM-RFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 81 i~~a~~~~~-~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~-~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
||+||.... . + -...+++|+.++.++.+++. +.+ .. ++|++||.......+ ..|+.+|.+.+.
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~ 180 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQ 180 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCCCCchHHHHHHHHHH
Confidence 999987432 1 1 13467889998777766653 455 56 999999987654433 689999999999
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
+.+.. ++++.+++||.+.++..... +... . ....... ....++..+|+|++++.++..+....++
T Consensus 181 l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~-~-~~~~~~~----~~~~~~~pedvA~~v~~l~s~~~~~~g~ 252 (272)
T 2nwq_A 181 FSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGD-Q-ARYDKTY----AGAHPIQPEDIAETIFWIMNQPAHLNIN 252 (272)
T ss_dssp HHHHHHTTCTTSCCEEEEEEECSBC----------------------------CCCCBCHHHHHHHHHHHHTSCTTEEEE
T ss_pred HHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccc-h-HHHHHhh----ccCCCCCHHHHHHHHHHHhCCCccCccc
Confidence 88764 48999999999875521100 0000 0 0000000 0112478999999999999876543566
Q ss_pred eEEecCC
Q 047628 218 IYELGGP 224 (327)
Q Consensus 218 ~~~v~~~ 224 (327)
.+.+.++
T Consensus 253 ~i~v~~~ 259 (272)
T 2nwq_A 253 SLEIMPV 259 (272)
T ss_dssp EEEEEET
T ss_pred eEEEeec
Confidence 6766653
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=156.01 Aligned_cols=205 Identities=13% Similarity=0.105 Sum_probs=147.5
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh----------hhcccCCCCCeeEEeeCCCChhHHH
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR----------HLKLMGDLGQIVPMKFNPRDDNTIK 71 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----------~~~~~~~~~~v~~~~~Dl~~~~~~~ 71 (327)
+|.++.+++|||||+|.||++++++|+++|++|++++|+.++... .+...+ .++.++++|+++++++.
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~ 81 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG--GQALPIVGDIRDGDAVA 81 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT--SEEEEEECCTTSHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHH
Confidence 345667899999999999999999999999999999999764211 111122 46889999999999888
Q ss_pred HHhc-------cccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCCC--
Q 047628 72 ATMA-------KANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASSS-- 130 (327)
Q Consensus 72 ~~~~-------~~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~~-- 130 (327)
++++ .+|++||+||...... . ...+++|+.++.++++++... + ..++|++||......
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~ 160 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKW 160 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGGG
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCCC
Confidence 7775 6899999999753211 1 346679999999999988654 3 469999999766543
Q ss_pred -CCchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 131 -SPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 131 -~~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
....|+.+|.+.+.+.+.. ++++..++||.+.. ...... ... . ..+ ...+...+|+|+
T Consensus 161 ~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~--t~~~~~---~~~-~-~~~-------~~r~~~pedvA~ 226 (285)
T 3sc4_A 161 LRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVA--TAAVQN---LLG-G-DEA-------MARSRKPEVYAD 226 (285)
T ss_dssp SCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBC--CHHHHH---HHT-S-CCC-------CTTCBCTHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccc--cHHHHh---hcc-c-ccc-------ccCCCCHHHHHH
Confidence 2378999999999887653 49999999995431 122111 111 1 111 124567899999
Q ss_pred HHHHHhhcCCCCCCceEEecC
Q 047628 203 AVTAALKDDGTSMGKIYELGG 223 (327)
Q Consensus 203 ~~~~~l~~~~~~~~~~~~v~~ 223 (327)
+++.++..+....|+.+.+.+
T Consensus 227 ~~~~l~s~~~~~tG~~i~~dg 247 (285)
T 3sc4_A 227 AAYVVLNKPSSYTGNTLLCED 247 (285)
T ss_dssp HHHHHHTSCTTCCSCEEEHHH
T ss_pred HHHHHhCCcccccceEEEEcC
Confidence 999999876532566665554
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.9e-20 Score=161.05 Aligned_cols=212 Identities=16% Similarity=0.033 Sum_probs=149.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++.+++|||||+|.||++++++|+++|++|++++|+.+.........+ .++.++.+|+++++++.++++ .
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG--GNAVGVVGDVRSLQDQKRAAERCLAAFGK 79 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4557899999999999999999999999999999998655433222222 468999999999998877765 4
Q ss_pred ccEEEEccccccccC-------------cchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 77 ANVVINLIGREYETR-------------NYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~-------------~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
+|++||+||...... -...+++|+.++.++++++...- +-.++|++||.......+ ..|+.+|
T Consensus 80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK 159 (281)
T 3zv4_A 80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATK 159 (281)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHHH
T ss_pred CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHHH
Confidence 699999999742211 02356789999999998875431 014899999977654443 6799999
Q ss_pred HHHHHHHHhhC------CCeEEEecCeeecCCChh----H-H------HHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 140 AAAEEAVLREL------PWATIMRPAAMIGTEDRL----L-N------KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 140 ~~~E~~~~~~~------~~~~i~r~~~~~G~~~~~----~-~------~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
.+.+.+.+... +++..++||.+..+.... . . .+....... .+ ...+.+.+|+|.
T Consensus 160 aa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-------~~r~~~pedvA~ 230 (281)
T 3zv4_A 160 HAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSV--LP-------IGRMPALEEYTG 230 (281)
T ss_dssp HHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHT--CT-------TSSCCCGGGGSH
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhc--CC-------CCCCCCHHHHHH
Confidence 99998887542 889999999887542100 0 0 011111111 11 124567899999
Q ss_pred HHHHHhhcCC-C-CCCceEEecCCcc
Q 047628 203 AVTAALKDDG-T-SMGKIYELGGPDI 226 (327)
Q Consensus 203 ~~~~~l~~~~-~-~~~~~~~v~~~~~ 226 (327)
+++.++..+. . ..|+++++.++..
T Consensus 231 ~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 231 AYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp HHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred HHHHhhcccccccccCcEEEECCCCc
Confidence 9999998332 1 2789999999754
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=8.2e-20 Score=160.46 Aligned_cols=214 Identities=13% Similarity=0.062 Sum_probs=151.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEee-CCCCCchhhhccc--CCCCCeeEEeeCCCChh-------------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPF-RGCEDDPRHLKLM--GDLGQIVPMKFNPRDDN------------- 68 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~------------- 68 (327)
++.+++|||||+|+||++++++|+++|++|++++ |+.+......... ....++.++.+|+++++
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence 3457899999999999999999999999999999 8764432221111 01146889999999988
Q ss_pred ----HHHHHhc-------cccEEEEcccccccc-----C--------------c---chhHhhhhHHHHHHHHHHHH---
Q 047628 69 ----TIKATMA-------KANVVINLIGREYET-----R--------------N---YSFEDVNHFMAERIAGIAKE--- 112 (327)
Q Consensus 69 ----~~~~~~~-------~~d~vi~~a~~~~~~-----~--------------~---~~~~~~n~~~~~~l~~a~~~--- 112 (327)
++.++++ .+|+|||+||..... . . ...+++|+.++.++++++..
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887765 589999999974321 1 1 24578899999988887753
Q ss_pred -cCC-----cceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHh
Q 047628 113 -HGG-----IMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVK 177 (327)
Q Consensus 113 -~~~-----v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~ 177 (327)
.+. ..+||++||.......+ ..|+.+|.+++.+.+.. ++.+.+++||.+..+. ..++.......
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~~~~~~~~~ 282 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHR 282 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSCHHHHHHHH
T ss_pred hcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cccHHHHHHHH
Confidence 220 25899999987765443 68999999999887653 5899999999998765 22222222222
Q ss_pred hcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CCCCceEEecCCccc
Q 047628 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TSMGKIYELGGPDIF 227 (327)
Q Consensus 178 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~~v~~~~~~ 227 (327)
.. .++ + ..+.+.+|+|++++.++.... ...|+++++.++..+
T Consensus 283 ~~--~p~-~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 325 (328)
T 2qhx_A 283 SK--VPL-Y-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 325 (328)
T ss_dssp TT--CTT-T-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hh--CCC-C-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence 11 111 0 035678999999999997532 226899999987543
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=154.42 Aligned_cols=210 Identities=16% Similarity=0.113 Sum_probs=141.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++++++|||||+|.||++++++|+++|++|++++|+.++......... ...++.++.+|+++++++.++++ .
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999999999998765332222111 11468889999999998887765 5
Q ss_pred ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||...... -...+++|+.++.++.+++. +.+ ..++|++||.......+ ..|+.+|.+.
T Consensus 82 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asKaal 160 (264)
T 3tfo_A 82 IDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATKFAV 160 (264)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence 899999999753211 13467889999988887764 344 56999999987664444 6799999999
Q ss_pred HHHHHhh-----CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC-CC
Q 047628 143 EEAVLRE-----LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS-MG 216 (327)
Q Consensus 143 E~~~~~~-----~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~-~~ 216 (327)
+.+.+.. ++++..++||.+..+...... . ....... ......+.+.+|+|++++.++..+... .+
T Consensus 161 ~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~---~----~~~~~~~--~~~~~~~~~pedvA~~v~~l~s~~~~~~~~ 231 (264)
T 3tfo_A 161 RAISDGLRQESTNIRVTCVNPGVVESELAGTIT---H----EETMAAM--DTYRAIALQPADIARAVRQVIEAPQSVDTT 231 (264)
T ss_dssp HHHHHHHHHHCSSEEEEEEEECCC--------------------------------CCCHHHHHHHHHHHHHSCTTEEEE
T ss_pred HHHHHHHHHhCCCCEEEEEecCCCcCccccccc---c----hhHHHHH--HhhhccCCCHHHHHHHHHHHhcCCccCccc
Confidence 8887654 588899999988754211110 0 0000000 001112468999999999999987641 23
Q ss_pred ceEEecCC
Q 047628 217 KIYELGGP 224 (327)
Q Consensus 217 ~~~~v~~~ 224 (327)
++.....+
T Consensus 232 ~i~i~p~~ 239 (264)
T 3tfo_A 232 EITIRPTA 239 (264)
T ss_dssp EEEEEECC
T ss_pred eEEEecCc
Confidence 34444443
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.6e-20 Score=157.72 Aligned_cols=217 Identities=12% Similarity=0.097 Sum_probs=144.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch---hhhccc-CCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP---RHLKLM-GDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
++.+++|||||+|.||++++++|+++|++|+++.|...... ...... ....++.++.+|++|++++.++++
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 44689999999999999999999999999999988654311 111111 112468899999999999888775
Q ss_pred --cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHHc--CCcceEEEEeccCCCCC--CCchHHHhHHH
Q 047628 76 --KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKEH--GGIMRFIQISCLGASSS--SPSRVFSTKAA 141 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~~--~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~ 141 (327)
++|++||+||...... . ...+++|+.++.++++++... + ..++|++||...... ....|+.+|.+
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa 167 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP-NGHIITIATSLLAAYTGFYSTYAGNKAP 167 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE-EEEEEEECCCHHHHHHCCCCC-----CH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC-CCEEEEEechhhccCCCCCchhHHHHHH
Confidence 5799999999753211 1 346779999999999998874 2 358999999754322 23679999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
.+.+.+.. ++++..++||.+..+ .... ..................+.+.+|+|++++.++......
T Consensus 168 ~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---~~~~----~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~i 240 (262)
T 3ksu_A 168 VEHYTRAASKELMKQQISVNAIAPGPMDTS---FFYG----QETKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTDGWWI 240 (262)
T ss_dssp HHHHHHHHHHHTTTTTCEEEEEEECCCCTH---HHHT----CC------------CCCCSCCGGGTHHHHHHHHTTTTTC
T ss_pred HHHHHHHHHHHHHHcCcEEEEEeeCCCcCc---cccc----cCchHHHHHHHhcCcccCCCCHHHHHHHHHHHcCCCCCc
Confidence 99887653 489999999988632 1110 000000111111112234678899999999998863323
Q ss_pred CCceEEecCCccccH
Q 047628 215 MGKIYELGGPDIFTV 229 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~ 229 (327)
.|+.+++.|+.....
T Consensus 241 tG~~i~vdGg~~~~~ 255 (262)
T 3ksu_A 241 NGQTIFANGGYTTRE 255 (262)
T ss_dssp CSCEEEESTTCCCC-
T ss_pred cCCEEEECCCccCCC
Confidence 689999999765544
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.9e-19 Score=151.20 Aligned_cols=212 Identities=12% Similarity=0.069 Sum_probs=152.5
Q ss_pred cCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccC--CCCCeeEEeeCCCChhHHHHHhc----
Q 047628 5 YSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 5 ~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
++.++++||||+ |.||++++++|+++|++|+++.|+.... ........ ...++.++.+|+++++++.++++
T Consensus 18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA 97 (267)
T ss_dssp CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 446899999999 8999999999999999999999987654 22222110 01468899999999998887775
Q ss_pred ---cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC----CCchHH
Q 047628 76 ---KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS----SPSRVF 136 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~----~~~~y~ 136 (327)
.+|++||+||...... ....+++|+.++.++++++ ++.+ ..++|++||...... ....|+
T Consensus 98 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~ 176 (267)
T 3gdg_A 98 DFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQEQTSYN 176 (267)
T ss_dssp HTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSSSCCHHHH
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCCCCCCcch
Confidence 4699999999754321 1357789999999998887 4444 469999999765432 236899
Q ss_pred HhHHHHHHHHHhhC------CCeEEEecCeeecCCChhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 137 STKAAAEEAVLREL------PWATIMRPAAMIGTEDRLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 137 ~~K~~~E~~~~~~~------~~~~i~r~~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+|.+.+.+.+... +.+..+.||.+..+..... ......... ......+.+.+|+|++++.++.
T Consensus 177 ~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~---------~~~~~r~~~~~dva~~~~~l~s 247 (267)
T 3gdg_A 177 VAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHS---------MIPMGRDGLAKELKGAYVYFAS 247 (267)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHT---------TSTTSSCEETHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHh---------cCCCCCCcCHHHHHhHhheeec
Confidence 99999998887642 6788999998875532221 112221211 1112356778999999999987
Q ss_pred cCCC-CCCceEEecCCcc
Q 047628 210 DDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~~ 226 (327)
.... ..|+++++.++..
T Consensus 248 ~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 248 DASTYTTGADLLIDGGYT 265 (267)
T ss_dssp TTCTTCCSCEEEESTTGG
T ss_pred CccccccCCEEEECCcee
Confidence 6432 2689999998754
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=151.49 Aligned_cols=213 Identities=18% Similarity=0.153 Sum_probs=150.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC-CCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhcc-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC-EDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMAK----- 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~-~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~----- 76 (327)
.+++++++||||+|.||++++++|+++|++|+++.++. +......... ....++.++.+|+++.+++.++++.
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 35568999999999999999999999999999875443 3322222111 1124688899999999888776642
Q ss_pred --------ccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHHHc--CCcceEEEEeccCCCCCCC--chHH
Q 047628 77 --------ANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAKEH--GGIMRFIQISCLGASSSSP--SRVF 136 (327)
Q Consensus 77 --------~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~~~--~~v~~~v~~Ss~~v~~~~~--~~y~ 136 (327)
+|++||+||...... . ...+++|+.++.++++++... + ..++|++||.......| ..|+
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~ 162 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD-NSRIINISSAATRISLPDFIAYS 162 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE-EEEEEEECCGGGTSCCTTBHHHH
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC-CCEEEEeCChhhccCCCCcchhH
Confidence 899999999743211 1 346789999999999998765 2 35899999987765444 7899
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
.+|.+.+.+.+.. ++++..++||.+..+..... ...........+ ...+.+.+|+|++++.
T Consensus 163 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dva~~~~~ 233 (255)
T 3icc_A 163 MTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA---------FNRLGEVEDIADTAAF 233 (255)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST---------TSSCBCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC---------cCCCCCHHHHHHHHHH
Confidence 9999999887643 59999999999986632111 111111211111 1345678999999999
Q ss_pred HhhcCCC-CCCceEEecCCcc
Q 047628 207 ALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~~ 226 (327)
++..... ..|+++++.++..
T Consensus 234 l~s~~~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 234 LASPDSRWVTGQLIDVSGGSC 254 (255)
T ss_dssp HHSGGGTTCCSCEEEESSSTT
T ss_pred HhCcccCCccCCEEEecCCee
Confidence 8865432 2689999998753
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.6e-19 Score=154.82 Aligned_cols=214 Identities=13% Similarity=0.066 Sum_probs=149.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEee-CCCCCchhhhccc--CCCCCeeEEeeCCCChh-------------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPF-RGCEDDPRHLKLM--GDLGQIVPMKFNPRDDN------------- 68 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~------------- 68 (327)
++.++++||||+|.||+++++.|+++|++|++++ |+.+......... ....++.++.+|+++++
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccccccc
Confidence 4467899999999999999999999999999999 8764432222111 01146889999999988
Q ss_pred ----HHHHHhc-------cccEEEEcccccccc-----C--------------c---chhHhhhhHHHHHHHHHHHH---
Q 047628 69 ----TIKATMA-------KANVVINLIGREYET-----R--------------N---YSFEDVNHFMAERIAGIAKE--- 112 (327)
Q Consensus 69 ----~~~~~~~-------~~d~vi~~a~~~~~~-----~--------------~---~~~~~~n~~~~~~l~~a~~~--- 112 (327)
++.++++ .+|++||+||..... + . ...+++|+.++.++++++..
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8877765 589999999974321 1 1 24678899999999888753
Q ss_pred -cCC-----cceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHh
Q 047628 113 -HGG-----IMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVK 177 (327)
Q Consensus 113 -~~~-----v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~ 177 (327)
.+. ..++|++||.......+ ..|+.+|.+.+.+.+.. ++++..++||.+..+. ..-+.+.....
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~~~~~~~~~~~ 245 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMPPAVWEGHR 245 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-GSCHHHHHHHH
T ss_pred hcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-cCCHHHHHHHH
Confidence 220 25899999987765443 78999999998887653 4899999999886443 11011111111
Q ss_pred hcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CCCCceEEecCCccc
Q 047628 178 KFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TSMGKIYELGGPDIF 227 (327)
Q Consensus 178 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~~v~~~~~~ 227 (327)
. ..++ . ..+.+.+|+|++++.++.... ...|+.+++.++..+
T Consensus 246 ~--~~p~-----~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 288 (291)
T 1e7w_A 246 S--KVPL-----Y-QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288 (291)
T ss_dssp T--TCTT-----T-TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred h--hCCC-----C-CCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence 1 1111 0 035678999999999997543 226889999987543
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.81 E-value=6.5e-19 Score=150.62 Aligned_cols=211 Identities=11% Similarity=0.011 Sum_probs=149.2
Q ss_pred cccCCcEEEEEcC--CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh-cccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 3 YVYSGIIATVFGT--TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-KLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 3 ~~~~~~~ilI~Ga--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
..++.++++|||| +|.||++++++|+++|++|++++|+.++....+ ...+ .++.++.+|+++++++.++++
T Consensus 3 ~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 3 GLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP--AKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS--SCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC--CCceEEEccCCCHHHHHHHHHHHHH
Confidence 3456689999999 999999999999999999999999865421222 2222 357889999999998887775
Q ss_pred ------cccEEEEccccccc---------c-Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCC-Cch
Q 047628 76 ------KANVVINLIGREYE---------T-RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSS-PSR 134 (327)
Q Consensus 76 ------~~d~vi~~a~~~~~---------~-~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~-~~~ 134 (327)
++|++||+||.... . +. ...+++|+.++.++++++...- +-.++|++||....... ...
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~ 160 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNW 160 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHH
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccccCchHH
Confidence 78999999997531 0 11 2467899999999999987642 01489999997764322 267
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHH----------------HHHHhhcCceeeecCCCce
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKW----------------AQFVKKFNFFPLFGDGSTR 191 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 191 (327)
|+.+|.+.+.+.+.. ++++.+++||.+..+ ....+ ....... .+. .
T Consensus 161 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p~-----~- 229 (269)
T 2h7i_A 161 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTL---AMSAIVGGALGEEAGAQIQLLEEGWDQR--API-----G- 229 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCH---HHHHHHTTTTCHHHHHHHHHHHHHHHHH--CTT-----C-
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccch---hhhccccccchhhHHHHHHHHHHhhhcc--CCc-----c-
Confidence 999999998887653 599999999988532 11111 0001100 111 0
Q ss_pred ecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCcc
Q 047628 192 IQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 192 ~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
+.+...+|+|++++.++..... ..|+.+.+.++..
T Consensus 230 rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 265 (269)
T 2h7i_A 230 WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH 265 (269)
T ss_dssp CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCee
Confidence 1255679999999999976432 2688999988643
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.9e-19 Score=154.62 Aligned_cols=200 Identities=16% Similarity=0.153 Sum_probs=144.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh----------hhcccCCCCCeeEEeeCCCChhHHHHHh
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR----------HLKLMGDLGQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----------~~~~~~~~~~v~~~~~Dl~~~~~~~~~~ 74 (327)
+..+++|||||+|.||++++++|+++|++|++++|+.++... .+...+ .++.++.+|++|++++.+++
T Consensus 43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG--GKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHH
T ss_pred CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHH
Confidence 345789999999999999999999999999999998775321 111222 46889999999999888877
Q ss_pred c-------cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC----C
Q 047628 75 A-------KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS----S 131 (327)
Q Consensus 75 ~-------~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~----~ 131 (327)
+ ++|+|||+||...... -...+++|+.++.++++++.. .+ ..+||++||...... .
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~~~~ 199 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQ 199 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGGTSS
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCCCCC
Confidence 5 6899999999753211 135779999999999998843 34 569999999876543 2
Q ss_pred CchHHHhHHHHHHHHHhh------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 132 PSRVFSTKAAAEEAVLRE------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 132 ~~~y~~~K~~~E~~~~~~------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
...|+.+|.+++.+.+.. ++.+..+.||.++.. .... ... ... ....+...+|+|++++
T Consensus 200 ~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T--~~~~----~~~--~~~-------~~~r~~~pedvA~~v~ 264 (346)
T 3kvo_A 200 HCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT--AAMD----MLG--GPG-------IESQCRKVDIIADAAY 264 (346)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC--HHHH----HHC--C---------CGGGCBCTHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc--HHHH----hhc--ccc-------ccccCCCHHHHHHHHH
Confidence 268999999998887653 488999999964422 1111 111 111 1234567899999999
Q ss_pred HHhhcCCCCCCceEEecC
Q 047628 206 AALKDDGTSMGKIYELGG 223 (327)
Q Consensus 206 ~~l~~~~~~~~~~~~v~~ 223 (327)
.++.......|+.+ +.+
T Consensus 265 ~L~s~~~~itG~~i-vdg 281 (346)
T 3kvo_A 265 SIFQKPKSFTGNFV-IDE 281 (346)
T ss_dssp HHHTSCTTCCSCEE-EHH
T ss_pred HHHhcCCCCCceEE-ECC
Confidence 99987332256665 555
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-18 Score=145.45 Aligned_cols=202 Identities=15% Similarity=0.049 Sum_probs=147.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
|+++||||||++-||+++++.|++.|++|.+.+|+.+......++ .+++..+++|++|++++.++++ ++|
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE---RPNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT---CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 358999999999999999999999999999999986543322222 2478899999999998877664 479
Q ss_pred EEEEccccccccC-----c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 79 VVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
++||+||...... . ...+++|+.++..+.+++. +.+ .++|.+||.......| ..|+.+|.++..
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~~~~~~~~~Y~asKaal~~ 155 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAFQSEPDSEAYASAKGGIVA 155 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence 9999998743211 1 3467889998888877664 333 4899999987655444 689999999988
Q ss_pred HHHhh------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 145 AVLRE------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 145 ~~~~~------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
+.+.. ++++..+.||.+--+.. ...... ... .|+ ..+...+|+|.+++.++...-. .|+
T Consensus 156 ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~~~----~~~--~Pl-------~R~g~pediA~~v~fL~s~~~i-TG~ 221 (247)
T 3ged_A 156 LTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQED----CAA--IPA-------GKVGTPKDISNMVLFLCQQDFI-TGE 221 (247)
T ss_dssp HHHHHHHHHTTTSEEEEEEECSBCCCC---CCHHH----HHT--STT-------SSCBCHHHHHHHHHHHHHCSSC-CSC
T ss_pred HHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHHHH----Hhc--CCC-------CCCcCHHHHHHHHHHHHhCCCC-CCC
Confidence 77654 38899999998854422 111211 111 121 1245679999999999975444 899
Q ss_pred eEEecCCcc
Q 047628 218 IYELGGPDI 226 (327)
Q Consensus 218 ~~~v~~~~~ 226 (327)
++.+.|+-+
T Consensus 222 ~i~VDGG~s 230 (247)
T 3ged_A 222 TIIVDGGMS 230 (247)
T ss_dssp EEEESTTGG
T ss_pred eEEECcCHH
Confidence 999998743
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-18 Score=148.69 Aligned_cols=198 Identities=15% Similarity=0.153 Sum_probs=142.8
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----------hcccCCCCCeeEEeeCCCChhHHHH
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----------LKLMGDLGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----------~~~~~~~~~v~~~~~Dl~~~~~~~~ 72 (327)
+.++.++++||||+|.||++++++|+++|++|++++|+.++.... +...+ .++.++.+|+++++++.+
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAG--GQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHT--SEEEEEECCTTCHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcC--CeEEEEeCCCCCHHHHHH
Confidence 456678999999999999999999999999999999987652211 11112 468899999999998887
Q ss_pred Hhc-------cccEEEEcccccccc----Cc----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC--C
Q 047628 73 TMA-------KANVVINLIGREYET----RN----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS--S 131 (327)
Q Consensus 73 ~~~-------~~d~vi~~a~~~~~~----~~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~--~ 131 (327)
+++ .+|++||+||..... .+ ...+++|+.++.++.+++.. .+ ..++|++||...... .
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~ 158 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWW 158 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCC
Confidence 765 579999999975321 11 34678999999999988754 33 469999999876644 2
Q ss_pred C--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 132 P--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 132 ~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
+ ..|+.+|.+.+.+.+.. ++++..++||.+.... .. .... ......+...+|+|+
T Consensus 159 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~--~~----~~~~----------~~~~~~~~~pedvA~ 222 (274)
T 3e03_A 159 GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATD--AI----NMLP----------GVDAAACRRPEIMAD 222 (274)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-----------------------CCCGGGSBCTHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccc--hh----hhcc----------cccccccCCHHHHHH
Confidence 2 67999999999887653 4999999999544221 11 1010 011123668899999
Q ss_pred HHHHHhhcCCC-CCCceE
Q 047628 203 AVTAALKDDGT-SMGKIY 219 (327)
Q Consensus 203 ~~~~~l~~~~~-~~~~~~ 219 (327)
+++.++..... ..|+.+
T Consensus 223 ~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 223 AAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp HHHHHHTSCCTTCCSCEE
T ss_pred HHHHHhCccccccCCeEE
Confidence 99999986543 146666
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=154.16 Aligned_cols=216 Identities=13% Similarity=0.009 Sum_probs=144.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHh---CCCEEEEeeCCCCCchhhhccc---CCCCCeeEEeeCCCChhHHHHHhc--
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAK---MGSQVLVPFRGCEDDPRHLKLM---GDLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~~~~~---~~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
.+..++++||||+|.||++++++|++ +|++|++++|+.+......... ....++.++.+|+++++++.++++
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 45678999999999999999999999 8999999999865433222211 111358899999999998877663
Q ss_pred -------ccc--EEEEccccccc--------cCc---chhHhhhhHHHHHHHHHHHHcC-----CcceEEEEeccCCCCC
Q 047628 76 -------KAN--VVINLIGREYE--------TRN---YSFEDVNHFMAERIAGIAKEHG-----GIMRFIQISCLGASSS 130 (327)
Q Consensus 76 -------~~d--~vi~~a~~~~~--------~~~---~~~~~~n~~~~~~l~~a~~~~~-----~v~~~v~~Ss~~v~~~ 130 (327)
.+| ++||+||.... .+. ...+++|+.++.++++++...- +..++|++||......
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 162 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence 257 99999997421 111 3467899999999999986532 1357999999877654
Q ss_pred CC--chHHHhHHHHHHHHHhhC-----CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHH
Q 047628 131 SP--SRVFSTKAAAEEAVLREL-----PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 131 ~~--~~y~~~K~~~E~~~~~~~-----~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
.+ ..|+.+|.+.+.+.+... +++..++||.+-. ++...+............+........+.+.+|+|++
T Consensus 163 ~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~ 239 (259)
T 1oaa_A 163 YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDN---DMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSS---HHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCc---chHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHH
Confidence 44 689999999999887642 7788888987742 2221111000000000000000001246788999999
Q ss_pred HHHHhhcCCCCCCceEEec
Q 047628 204 VTAALKDDGTSMGKIYELG 222 (327)
Q Consensus 204 ~~~~l~~~~~~~~~~~~v~ 222 (327)
++.++.......|+.+++.
T Consensus 240 v~~l~~~~~~itG~~i~vd 258 (259)
T 1oaa_A 240 LLGLLQKDTFQSGAHVDFY 258 (259)
T ss_dssp HHHHHHHCCSCTTEEEETT
T ss_pred HHHHHhhccccCCcEEecc
Confidence 9999976443256666654
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-19 Score=153.83 Aligned_cols=191 Identities=17% Similarity=0.067 Sum_probs=138.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.++++||||+|+||++++++|+++|++|++++|+.++...... ..+ ..++.++.+|++|++++.++++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG-AASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHT-CSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 456899999999999999999999999999999998654322211 111 1258899999999988887765
Q ss_pred -cccEEEEc-ccccccc----C---cchhHhhhhHHHHHHHHHHHHc---CCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 -KANVVINL-IGREYET----R---NYSFEDVNHFMAERIAGIAKEH---GGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 -~~d~vi~~-a~~~~~~----~---~~~~~~~n~~~~~~l~~a~~~~---~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
++|+|||+ ++..... + ....+++|+.++.++++++... + ..++|++||.......+ ..|+.+|.+
T Consensus 105 g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a 183 (286)
T 1xu9_A 105 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAYPMVAAYSASKFA 183 (286)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCCCCccHHHHHHHH
Confidence 68999999 5653221 1 1346789999999998887542 2 25999999987654444 789999999
Q ss_pred HHHHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.|.+.+.. ++++++++||.+..+ .... .. . +.....+++.+|+|+.++.+++.+.
T Consensus 184 ~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~---~~~~---~~--~--------~~~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 184 LDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE---TAMK---AV--S--------GIVHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH---HHHH---HS--C--------GGGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeecCccCCh---hHHH---hc--c--------ccccCCCCCHHHHHHHHHHHHhcCC
Confidence 98776432 488999999988632 1111 00 0 1112456889999999999998765
Q ss_pred C
Q 047628 213 T 213 (327)
Q Consensus 213 ~ 213 (327)
.
T Consensus 248 ~ 248 (286)
T 1xu9_A 248 E 248 (286)
T ss_dssp S
T ss_pred c
Confidence 4
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.3e-19 Score=153.31 Aligned_cols=199 Identities=16% Similarity=0.056 Sum_probs=138.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
..+++|||||+|+||++++++|+++|++|++++|+.+.......... ....+.++++|++|++++.++++ .
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999999999999999998755332222110 01235889999999998887775 4
Q ss_pred ccEEEEcccccccc------Cc---chhHhhhhHHHHHHHHHHHH----cC-CcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 77 ANVVINLIGREYET------RN---YSFEDVNHFMAERIAGIAKE----HG-GIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 77 ~d~vi~~a~~~~~~------~~---~~~~~~n~~~~~~l~~a~~~----~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+|++||+||..... +. ...+++|+.++.++.+++.. .+ +-.++|++||.......+ ..|+.+|.
T Consensus 112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKa 191 (281)
T 4dry_A 112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKH 191 (281)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHH
Confidence 69999999974321 11 34778899998888777643 21 025899999987654443 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.+.+.. ++++.+++||.+..+.. .. ... . ............+++.+|+|++++.++..+..
T Consensus 192 a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~---~~----~~~-~-~~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 192 AITGLTKSTALDGRMHDIACGQIDIGNAATDMT---AR----MST-G-VLQANGEVAAEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEEECBCC--------------C-E-EECTTSCEEECCCBCHHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEECcCcChhh---hh----hcc-h-hhhhhhcccccCCCCHHHHHHHHHHHhCCCcc
Confidence 999887653 48899999998874321 11 110 0 00000111223467899999999999998765
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.1e-19 Score=153.18 Aligned_cols=198 Identities=14% Similarity=0.073 Sum_probs=126.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHH---HHHh---ccc
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI---KATM---AKA 77 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~---~~~~---~~~ 77 (327)
+++++++|||||+|+||++++++|++ |+.|++++|+.+....... ..++.++.+|+.+++.. .+.+ .++
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~i 76 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE----IEGVEPIESDIVKEVLEEGGVDKLKNLDHV 76 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT----STTEEEEECCHHHHHHTSSSCGGGTTCSCC
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh----hcCCcceecccchHHHHHHHHHHHHhcCCC
Confidence 45578999999999999999999987 9999999998654322221 24688999999876442 1222 358
Q ss_pred cEEEEccccccccC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|+|||+||...... ....+++|+.++.++.+++. +.+ .++|++||.......+ ..|+.+|.+.+
T Consensus 77 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 154 (245)
T 3e9n_A 77 DTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPHPGNTIYAASKHALR 154 (245)
T ss_dssp SEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC----------CHHHHHHHHHHH
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCCCCchHHHHHHHHHH
Confidence 99999999754321 13467889999888877764 333 4899999987765444 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG 216 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 216 (327)
.+.+.. ++++.+++||.+.++.... +.... +.......+++.+|+|++++.+++.+.. +
T Consensus 155 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~---~~~~~---------~~~~~~~~~~~p~dvA~~i~~l~~~~~~--~ 220 (245)
T 3e9n_A 155 GLADAFRKEEANNGIRVSTVSPGPTNTPMLQG---LMDSQ---------GTNFRPEIYIEPKEIANAIRFVIDAGET--T 220 (245)
T ss_dssp HHHHHHHHHHGGGTCEEEEEEECCC----------------------------CCGGGSCHHHHHHHHHHHHTSCTT--E
T ss_pred HHHHHHHHHhhhcCeEEEEEecCCccCchhhh---hhhhh---------hcccccccCCCHHHHHHHHHHHHcCCCc--c
Confidence 888653 4999999999998652211 11000 0111124578899999999999998764 6
Q ss_pred ceEEec
Q 047628 217 KIYELG 222 (327)
Q Consensus 217 ~~~~v~ 222 (327)
.+|++.
T Consensus 221 ~~~~i~ 226 (245)
T 3e9n_A 221 QITNVD 226 (245)
T ss_dssp EEEEEE
T ss_pred ceeeeE
Confidence 788875
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=4.6e-19 Score=150.27 Aligned_cols=206 Identities=12% Similarity=-0.002 Sum_probs=140.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh--hcccCCCCCeeEEeeCCCChhHHHH----HhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH--LKLMGDLGQIVPMKFNPRDDNTIKA----TMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~~~~~~~~~v~~~~~Dl~~~~~~~~----~~~~~d~v 80 (327)
|+++|||||+|+||+++++.|+++|++|++++|+.++.... +...+ .++..+ |..+.+.+.+ .+.++|+|
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~--~~~~~~--d~~~v~~~~~~~~~~~g~iD~l 76 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY--PQLKPM--SEQEPAELIEAVTSAYGQVDVL 76 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHC--TTSEEC--CCCSHHHHHHHHHHHHSCCCEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--CcEEEE--CHHHHHHHHHHHHHHhCCCCEE
Confidence 36899999999999999999999999999999987653321 11112 233333 5544433322 22368999
Q ss_pred EEccccc-ccc-----C---cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 81 INLIGRE-YET-----R---NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 81 i~~a~~~-~~~-----~---~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
||+||.. ... + -...+++|+.++.++++++. +.+ ..++|++||.......+ ..|+.+|.+.+.+
T Consensus 77 v~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~ 155 (254)
T 1zmt_A 77 VSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTL 155 (254)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred EECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCCCchHHHHHHHHHHHH
Confidence 9999975 211 1 13467889999998888764 444 56999999987654433 6899999999988
Q ss_pred HHhh-------CCCeEEEecCeeecCCCh-----hH----HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDR-----LL----NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~-----~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.. ++++.+++||.++|+... .+ .......... .+ ...+.+.+|+|++++.++.
T Consensus 156 ~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~--~p-------~~~~~~p~dvA~~v~~l~s 226 (254)
T 1zmt_A 156 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV--TA-------LQRLGTQKELGELVAFLAS 226 (254)
T ss_dssp HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH--SS-------SSSCBCHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhcc--CC-------CCCCcCHHHHHHHHHHHhC
Confidence 7653 599999999999776421 11 0111111110 11 1235788999999999988
Q ss_pred cCCC-CCCceEEecCCcc
Q 047628 210 DDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~~ 226 (327)
.... ..|+.+++.++..
T Consensus 227 ~~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 227 GSCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp TSCGGGTTCEEEESTTCC
T ss_pred cccCCccCCEEEECCCch
Confidence 6542 2688999988753
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.80 E-value=8.4e-18 Score=139.54 Aligned_cols=204 Identities=14% Similarity=0.106 Sum_probs=148.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---cccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA---KANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---~~d~vi~ 82 (327)
+.++++||||++-||+++++.|++.|++|.+.+|+.+...... ..++..+.+|++|++++.++++ .+|++||
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVN 84 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-----HPRIRREELDITDSQRLQRLFEALPRLDVLVN 84 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-----CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-----cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEE
Confidence 5789999999999999999999999999999999876643221 1468899999999999888775 4799999
Q ss_pred ccccccccCc------chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh-
Q 047628 83 LIGREYETRN------YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE- 149 (327)
Q Consensus 83 ~a~~~~~~~~------~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~- 149 (327)
+||....... ...+++|+.++..+.+++. +.+ .++|.+||.......| ..|+.+|..+..+.+..
T Consensus 85 NAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA 162 (242)
T 4b79_A 85 NAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLA 162 (242)
T ss_dssp CCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9997533211 2467889988887777653 333 5899999987654444 68999999998887654
Q ss_pred ------CCCeEEEecCeeecCCCh-h--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceE
Q 047628 150 ------LPWATIMRPAAMIGTEDR-L--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIY 219 (327)
Q Consensus 150 ------~~~~~i~r~~~~~G~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~ 219 (327)
++++..+.||.+--+... . -......+.+.-++. .+...+|+|.+++.++..... ..|+++
T Consensus 163 ~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~Plg---------R~g~peeiA~~v~fLaSd~a~~iTG~~l 233 (242)
T 4b79_A 163 CEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLA---------RWGEAPEVASAAAFLCGPGASFVTGAVL 233 (242)
T ss_dssp HHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTC---------SCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred HHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHHHhCchhcCccCceE
Confidence 489999999988654211 0 012222222222221 245669999999999876542 278999
Q ss_pred EecCCc
Q 047628 220 ELGGPD 225 (327)
Q Consensus 220 ~v~~~~ 225 (327)
.+.++-
T Consensus 234 ~VDGG~ 239 (242)
T 4b79_A 234 AVDGGY 239 (242)
T ss_dssp EESTTG
T ss_pred EECccH
Confidence 998863
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=3.5e-19 Score=150.32 Aligned_cols=199 Identities=13% Similarity=0.007 Sum_probs=140.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCC--CChhHHHHHhc----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNP--RDDNTIKATMA---- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl--~~~~~~~~~~~---- 75 (327)
+..++++||||+|+||++++++|+++|++|++++|+.++...... ..+ .+++.++.+|+ ++++++.++++
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 446899999999999999999999999999999998765332222 111 13567777777 88888776664
Q ss_pred ---cccEEEEccccccccC---------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ---KANVVINLIGREYETR---------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~---------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
++|++||+||...... ....+++|+.++.++++++. +.+ ..++|++||.......+ ..|+.
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~ 169 (247)
T 3i1j_A 91 EFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRANWGAYGV 169 (247)
T ss_dssp HHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCTTCHHHHH
T ss_pred hCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCCCcchhHH
Confidence 5799999999742211 13467899999999999874 344 56999999976654443 78999
Q ss_pred hHHHHHHHHHhh--------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 138 TKAAAEEAVLRE--------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 138 ~K~~~E~~~~~~--------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|.+.+.+.+.. ++++..++||.+.. .... ... .......+...+|+|++++.++.
T Consensus 170 sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t---~~~~----~~~---------~~~~~~~~~~p~dva~~~~~l~s 233 (247)
T 3i1j_A 170 SKFATEGLMQTLADELEGVTAVRANSINPGATRT---GMRA----QAY---------PDENPLNNPAPEDIMPVYLYLMG 233 (247)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSS---HHHH----HHS---------TTSCGGGSCCGGGGTHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccC---ccch----hcc---------cccCccCCCCHHHHHHHHHHHhC
Confidence 999999887643 36788899998752 1111 111 01112345678999999999987
Q ss_pred cCCC-CCCceEEe
Q 047628 210 DDGT-SMGKIYEL 221 (327)
Q Consensus 210 ~~~~-~~~~~~~v 221 (327)
.... ..|+.+++
T Consensus 234 ~~~~~itG~~i~~ 246 (247)
T 3i1j_A 234 PDSTGINGQALNA 246 (247)
T ss_dssp GGGTTCCSCEEEC
T ss_pred chhccccCeeecC
Confidence 5432 25766664
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.4e-18 Score=143.47 Aligned_cols=214 Identities=11% Similarity=0.026 Sum_probs=150.8
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++++.+.++||||++-||+++++.|+++|.+|.+.+|+.+......++.. ...++..+++|+++++++.++++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 35678999999999999999999999999999999998765433222211 12468899999999998887764
Q ss_pred -cccEEEEccccccccC------c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 -KANVVINLIGREYETR------N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~------~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+||...... . ...+++|+.++..+.+++. +.+ -.++|.+||.......| ..|+.+|
T Consensus 83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~~~~Y~asK 161 (254)
T 4fn4_A 83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVAK 161 (254)
T ss_dssp SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSSCHHHHHHH
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCCChHHHHHH
Confidence 4799999999643211 1 2467889988877777653 444 35899999987654444 6899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCC-----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTED-----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
.++..+.+.. ++++..+.||.+--+.. ..-...........+.. .+...+|+|.+++.+
T Consensus 162 aal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~---------R~g~pediA~~v~fL 232 (254)
T 4fn4_A 162 HGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS---------RLAEPEDIANVIVFL 232 (254)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCC---------CCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCC---------CCcCHHHHHHHHHHH
Confidence 9998887654 48999999998864411 11011111111111111 234569999999998
Q ss_pred hhcCCC-CCCceEEecCCcc
Q 047628 208 LKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~~ 226 (327)
+..... ..|+++.+.|+-+
T Consensus 233 aSd~a~~iTG~~i~VDGG~t 252 (254)
T 4fn4_A 233 ASDEASFVNGDAVVVDGGLT 252 (254)
T ss_dssp HSGGGTTCCSCEEEESTTGG
T ss_pred hCchhcCCcCCEEEeCCCcc
Confidence 875443 2789999998743
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.3e-18 Score=147.97 Aligned_cols=212 Identities=17% Similarity=0.081 Sum_probs=137.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc--------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------- 75 (327)
++.+++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|++++.++++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g 82 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG 82 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 556899999999999999999999999999999998654322221110 01358889999999988876653
Q ss_pred cccEEEEccc--cc------c----ccCc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC-chH
Q 047628 76 KANVVINLIG--RE------Y----ETRN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP-SRV 135 (327)
Q Consensus 76 ~~d~vi~~a~--~~------~----~~~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~-~~y 135 (327)
.+|++||+|| .. . ..+. ...+++|+.++.++.+++. +.+ ..++|++||.......+ ..|
T Consensus 83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~Y 161 (260)
T 2qq5_A 83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYMFNVPY 161 (260)
T ss_dssp CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCCSSHHH
T ss_pred CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCCCCCch
Confidence 3699999994 32 0 0111 2456778888777766553 444 57999999987654333 689
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChh-HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL-LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+.+|.+.+.+.+.. ++++.+++||.+..+.... ..... ............+ ...+...+|+|++++.+
T Consensus 162 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~pe~va~~v~~l 237 (260)
T 2qq5_A 162 GVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEE--VLQDPVLKQFKSA--FSSAETTELSGKCVVAL 237 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcccc--ccchhHHHHHHhh--hccCCCHHHHHHHHHHH
Confidence 99999999887653 5999999999987653211 11000 0000000000000 11235789999999999
Q ss_pred hhcCCC--CCCceEEe
Q 047628 208 LKDDGT--SMGKIYEL 221 (327)
Q Consensus 208 l~~~~~--~~~~~~~v 221 (327)
+..+.. ..|+.+.+
T Consensus 238 ~s~~~~~~itG~~i~~ 253 (260)
T 2qq5_A 238 ATDPNILSLSGKVLPS 253 (260)
T ss_dssp HTCTTGGGGTTCEEEH
T ss_pred hcCcccccccceeech
Confidence 876532 13544443
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=2.6e-18 Score=144.83 Aligned_cols=214 Identities=15% Similarity=0.080 Sum_probs=151.8
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh--hhcccCCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR--HLKLMGDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~--~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|.+.++.+.++||||++-||+++++.|+++|.+|.+.+|+.+.... .+...+ .++.++.+|+++++++.++++
T Consensus 1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQ--PRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcC--CCEEEEEeecCCHHHHHHHHHHHH
Confidence 7778889999999999999999999999999999999998776321 122222 578899999999988877664
Q ss_pred ----cccEEEEcccccccc----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCC--CchHHHh
Q 047628 76 ----KANVVINLIGREYET----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSS--PSRVFST 138 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~--~~~y~~~ 138 (327)
.+|++||+||..... .. ...+++|+.++..+.+++. +.+ .++|.+||....... ...|+.+
T Consensus 79 ~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~~~~~~Y~as 156 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAVTGQGNTSGYCAS 156 (258)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHHHCCSSCHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhccCCCCchHHHHH
Confidence 479999999974321 11 2466889888888777653 333 489999997654333 3789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCC-hhHHH------HHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTED-RLLNK------WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
|.+++.+.+.. ++++..+.||.+--+.. ..... ....... ..|+ | ..+...+|+|.++
T Consensus 157 Kaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~pl-g-----~R~g~peeiA~~v 228 (258)
T 4gkb_A 157 KGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAA--KVPL-G-----RRFTTPDEIADTA 228 (258)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHT--TCTT-T-----TSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHh--cCCC-C-----CCCcCHHHHHHHH
Confidence 99998887654 49999999998865421 11110 1111111 1111 0 1345679999999
Q ss_pred HHHhhcCCC-CCCceEEecCCcc
Q 047628 205 TAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 205 ~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
+.++..... ..|+++.+.|+-+
T Consensus 229 ~fLaS~~a~~iTG~~i~VDGG~T 251 (258)
T 4gkb_A 229 VFLLSPRASHTTGEWLFVDGGYT 251 (258)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHhCchhcCccCCeEEECCCcc
Confidence 998875442 3799999998743
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.9e-18 Score=144.50 Aligned_cols=210 Identities=16% Similarity=0.070 Sum_probs=150.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
+..+.+|||||++-||+.+++.|++.|.+|.+.+|+.+.......+.+ .++..+++|++|++++.++++ .+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG--GGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC--TTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 446789999999999999999999999999999998776555445444 468889999999998887764 36
Q ss_pred cEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 78 NVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
|++||+||.....+ . ...+++|+.++..+.+++...= +-.++|.+||.......| ..|+.+|.++..+.
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~lt 184 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFA 184 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHH
Confidence 99999999743211 1 3477889999999998876431 013799999976654444 68999999998887
Q ss_pred Hhh-------CCCeEEEecCeeecCCC-hh-------HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 147 LRE-------LPWATIMRPAAMIGTED-RL-------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+.. ++++..+.||.+--+.- .. -..+....... .|+ -.+...+|+|.+++.++...
T Consensus 185 r~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--~Pl-------gR~g~peeiA~~v~FLaSd~ 255 (273)
T 4fgs_A 185 RNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQ--VPM-------GRVGRAEEVAAAALFLASDD 255 (273)
T ss_dssp HHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHH--STT-------SSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCch
Confidence 754 38999999998864321 00 01122222211 121 12455699999999998754
Q ss_pred CC-CCCceEEecCCc
Q 047628 212 GT-SMGKIYELGGPD 225 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~ 225 (327)
.. ..|+++.+.|+-
T Consensus 256 a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 256 SSFVTGAELFVDGGS 270 (273)
T ss_dssp GTTCCSCEEEESTTT
T ss_pred hcCccCCeEeECcCh
Confidence 42 278999998864
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=3.3e-18 Score=143.59 Aligned_cols=213 Identities=16% Similarity=0.125 Sum_probs=150.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+++.+.++||||++-||+++++.|+++|.+|.+.+|+.+...+...+.. ...++..+++|+++++++.++++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 3567999999999999999999999999999999998765433222211 12468899999999998887764
Q ss_pred cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
.+|++||+||...... . ...+++|+.++..+.+++. +.++-.++|.+||.......| ..|+.+|.+
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaa 165 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGG 165 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHH
Confidence 3699999999754321 1 3467889988888877653 221135899999987654444 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+..+.+.. ++++..+.||.+.-+..... +.+...+...-++. .+...+|+|.+++.++...
T Consensus 166 l~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~pediA~~v~fL~S~~ 236 (255)
T 4g81_D 166 IKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQ---------RWGRPEELIGTAIFLSSKA 236 (255)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTC---------SCBCGGGGHHHHHHHHSGG
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCC---------CCcCHHHHHHHHHHHhCch
Confidence 98887654 48999999998874421111 11222222222221 2345689999999888654
Q ss_pred CC-CCCceEEecCCc
Q 047628 212 GT-SMGKIYELGGPD 225 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~ 225 (327)
.. ..|+.+.+.|+-
T Consensus 237 a~~iTG~~i~VDGG~ 251 (255)
T 4g81_D 237 SDYINGQIIYVDGGW 251 (255)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hCCCcCCEEEECCCe
Confidence 32 278999998863
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=8.5e-18 Score=154.80 Aligned_cols=193 Identities=15% Similarity=0.135 Sum_probs=141.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCCCCch------hhhcccCCCCCeeEEeeCCCChhHHHHHhccc-
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGCEDDP------RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA- 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~------~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~- 77 (327)
..+++|||||+|+||.+++++|+++|++ |++++|+..... ..+...+ .++.++.+|++|++++.++++++
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g--~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALG--ARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999985 999999864211 1122222 46889999999999999988765
Q ss_pred -----cEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC-CC-CCCchHHHhHHHH
Q 047628 78 -----NVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA-SS-SSPSRVFSTKAAA 142 (327)
Q Consensus 78 -----d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v-~~-~~~~~y~~~K~~~ 142 (327)
|+|||+||..... +. ...+++|+.++.++.++++..+ .++||++||... .. .....|+.+|...
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~~g~~~Yaaaka~l 381 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPGLGGYAPGNAYL 381 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTTCTTTHHHHHHH
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCCCCCHHHHHHHHHH
Confidence 9999999975431 11 3466789999999999999887 889999999643 32 2337899999999
Q ss_pred HHHHHh---hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLR---ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~---~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+... .++++++++||.+.+.+ +.... . ...+ ......+++.+|+++++..++..+..
T Consensus 382 ~~la~~~~~~gi~v~~i~pG~~~~~g--m~~~~---~--~~~~-----~~~g~~~i~~e~~a~~l~~~l~~~~~ 443 (486)
T 2fr1_A 382 DGLAQQRRSDGLPATAVAWGTWAGSG--MAEGP---V--ADRF-----RRHGVIEMPPETACRALQNALDRAEV 443 (486)
T ss_dssp HHHHHHHHHTTCCCEEEEECCBC-------------------C-----TTTTEECBCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHhcCCeEEEEECCeeCCCc--ccchh---H--HHHH-----HhcCCCCCCHHHHHHHHHHHHhCCCC
Confidence 877643 46999999999987643 11100 0 0001 11225679999999999999987654
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=4.2e-17 Score=150.76 Aligned_cols=208 Identities=14% Similarity=0.134 Sum_probs=150.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc---hh---hhcccCCCCCeeEEeeCCCChhHHHHHhcc--
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD---PR---HLKLMGDLGQIVPMKFNPRDDNTIKATMAK-- 76 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~~---~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-- 76 (327)
..+++|||||+|+||.+++++|+++|+ .|++++|+.... .. .+...+ .++.++.+|++|++++.+++++
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHG--CEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTT--CEEEEEECCSSCHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcC--CEEEEEEeCCCCHHHHHHHHhcCC
Confidence 357899999999999999999999998 699999986421 11 122222 4688999999999999999976
Q ss_pred ccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccCC-CCC-CCchHHHhHHHHHHH
Q 047628 77 ANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLGA-SSS-SPSRVFSTKAAAEEA 145 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~v-~~~-~~~~y~~~K~~~E~~ 145 (327)
+|+|||+||..... .. ...+++|+.++.++.+++... + .++||++||... ... ....|+.+|...|.+
T Consensus 336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~l 414 (511)
T 2z5l_A 336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGNAGQGAYAAANAALDAL 414 (511)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHH
T ss_pred CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHH
Confidence 99999999975432 11 346688999999999998876 5 789999999754 332 237899999999988
Q ss_pred HHh---hCCCeEEEecCeeecCC--ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEE
Q 047628 146 VLR---ELPWATIMRPAAMIGTE--DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYE 220 (327)
Q Consensus 146 ~~~---~~~~~~i~r~~~~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~ 220 (327)
.+. .++++++++||.+-+.+ ..... ..... ..+.+++.+|+++++..++..+.. .+.
T Consensus 415 a~~~~~~gi~v~sv~pG~~~~tgm~~~~~~---~~~~~-----------~g~~~l~~e~~a~~l~~al~~~~~----~v~ 476 (511)
T 2z5l_A 415 AERRRAAGLPATSVAWGLWGGGGMAAGAGE---ESLSR-----------RGLRAMDPDAAVDALLGAMGRNDV----CVT 476 (511)
T ss_dssp HHHHHTTTCCCEEEEECCBCSTTCCCCHHH---HHHHH-----------HTBCCBCHHHHHHHHHHHHHHTCS----EEE
T ss_pred HHHHHHcCCcEEEEECCcccCCcccccccH---HHHHh-----------cCCCCCCHHHHHHHHHHHHhCCCC----EEE
Confidence 764 46999999999874321 11111 11110 113568899999999999987764 333
Q ss_pred ecCCccccHHHHHHHHH
Q 047628 221 LGGPDIFTVHELAELMY 237 (327)
Q Consensus 221 v~~~~~~s~~el~~~i~ 237 (327)
+.. +.+..+...+.
T Consensus 477 v~~---~d~~~~~~~~~ 490 (511)
T 2z5l_A 477 VVD---VDWERFAPATN 490 (511)
T ss_dssp ECC---BCHHHHHHHHH
T ss_pred EEe---CCHHHHHhhhc
Confidence 333 45655554443
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=7e-17 Score=136.52 Aligned_cols=201 Identities=16% Similarity=0.158 Sum_probs=142.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||++-||+++++.|+++|++|.+.+|+..... .+...+++|+++++++.++++ ++
T Consensus 9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 79 (261)
T 4h15_A 9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL---------PEELFVEADLTTKEGCAIVAEATRQRLGGV 79 (261)
T ss_dssp CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------CTTTEEECCTTSHHHHHHHHHHHHHHTSSC
T ss_pred CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC---------CcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 34689999999999999999999999999999999765321 234578999999988876654 47
Q ss_pred cEEEEcccccccc-------Cc---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCC---CchHHHhHH
Q 047628 78 NVVINLIGREYET-------RN---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSS---PSRVFSTKA 140 (327)
Q Consensus 78 d~vi~~a~~~~~~-------~~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~---~~~y~~~K~ 140 (327)
|++||+||..... +. ...+++|+.++..+.+++ ++.+ -.++|.+||....... ...|+.+|.
T Consensus 80 DilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~~~~~Y~asKa 158 (261)
T 4h15_A 80 DVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPESTTAYAAAKA 158 (261)
T ss_dssp SEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTTCHHHHHHHH
T ss_pred CEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCCccHHHHHHHH
Confidence 9999999864221 11 246788988887777765 3444 3589999997654333 367999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHh-h---------------cCceeeecCCCceecceeH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVK-K---------------FNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~i~~ 197 (327)
+++.+.+.. ++++..+.||.+--+ ....+..... + ....|+ ..+...
T Consensus 159 al~~lt~~lA~Ela~~gIrVN~V~PG~i~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------gR~g~p 228 (261)
T 4h15_A 159 ALSTYSKAMSKEVSPKGVRVVRVSPGWIETE---ASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL-------GRPAKP 228 (261)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCCH---HHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT-------SSCBCH
T ss_pred HHHHHHHHHHHHhhhhCeEEEEEeCCCcCCc---chhhhhHHHHHhhccchhhHHHHHHHHhcCCCC-------CCCcCH
Confidence 998887653 489999999988532 2111111100 0 011111 235678
Q ss_pred HHHHHHHHHHhhcCCC-CCCceEEecCCc
Q 047628 198 VDVAAAVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 198 ~D~a~~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
+|+|.+++.++..... ..|+.+.+.|+-
T Consensus 229 eevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 229 EEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 9999999998865442 278999998863
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.75 E-value=8e-18 Score=146.78 Aligned_cols=193 Identities=13% Similarity=0.040 Sum_probs=137.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCCh-hHHHHHhc-------c
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDD-NTIKATMA-------K 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~-~~~~~~~~-------~ 76 (327)
++++|||||+|+||++++++|+++|++|++++|+.++.......+. ...++.++.+|++++ +++.++++ +
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~ 91 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGK 91 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSS
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999998765433322221 113689999999998 77666554 6
Q ss_pred ccEEEEcccccccc--------------------------------------CcchhHhhhhHHHHHHHHHHHH----cC
Q 047628 77 ANVVINLIGREYET--------------------------------------RNYSFEDVNHFMAERIAGIAKE----HG 114 (327)
Q Consensus 77 ~d~vi~~a~~~~~~--------------------------------------~~~~~~~~n~~~~~~l~~a~~~----~~ 114 (327)
+|+|||+||..... .....+++|+.++.++++++.. .+
T Consensus 92 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~ 171 (311)
T 3o26_A 92 LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD 171 (311)
T ss_dssp CCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred CCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC
Confidence 89999999975210 0123578999998888887753 33
Q ss_pred CcceEEEEeccCCCCC---------------------------------------------CCchHHHhHHHHHHHHHhh
Q 047628 115 GIMRFIQISCLGASSS---------------------------------------------SPSRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 115 ~v~~~v~~Ss~~v~~~---------------------------------------------~~~~y~~~K~~~E~~~~~~ 149 (327)
..++|++||...... ....|+.+|.+.+.+.+.+
T Consensus 172 -~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l 250 (311)
T 3o26_A 172 -SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVL 250 (311)
T ss_dssp -SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred -CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHH
Confidence 469999999754211 1157999999999988764
Q ss_pred -----CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecC
Q 047628 150 -----LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG 223 (327)
Q Consensus 150 -----~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~ 223 (327)
.+.+..++||.+..+... . ......++.++.++.++..+....+..|...+
T Consensus 251 a~e~~~i~v~~v~PG~v~T~~~~-----------~------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s 306 (311)
T 3o26_A 251 ANKIPKFQVNCVCPGLVKTEMNY-----------G------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCS 306 (311)
T ss_dssp HHHCTTSEEEEECCCSBCSGGGT-----------T------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC-
T ss_pred HhhcCCceEEEecCCceecCCcC-----------C------------CCCCCHHHHHHHHHHHHhCCCCCCCceEeccc
Confidence 388899999988632100 0 12246789999999888765432334454444
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.75 E-value=4.9e-17 Score=135.24 Aligned_cols=211 Identities=16% Similarity=0.097 Sum_probs=150.2
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVV 80 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~v 80 (327)
++..+.++||||++-||+.+++.|++.|.+|.+.+|+.... ...+...+ .++..+.+|++|++++.++++ ++|++
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDG--GNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 35679999999999999999999999999999999976432 22233333 468899999999988887765 37999
Q ss_pred EEccccccccCc--------chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 81 INLIGREYETRN--------YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 81 i~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
||+||....... ...+++|+.++..+.+++. +.++-.++|.+||.......| ..|+.+|..+..+.
T Consensus 84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~lt 163 (247)
T 4hp8_A 84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLT 163 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHH
Confidence 999997543211 2467889999888877643 333125899999987654444 68999999998887
Q ss_pred Hhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CC
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SM 215 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~ 215 (327)
+.. ++++..+.||.+--+....+ ......+.+. .|+ ..+-..+|+|.+++.++..... ..
T Consensus 164 r~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~--~Pl-------gR~g~peeiA~~v~fLaSd~a~~iT 234 (247)
T 4hp8_A 164 KLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILER--IPA-------GRWGHSEDIAGAAVFLSSAAADYVH 234 (247)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTT--CTT-------SSCBCTHHHHHHHHHHTSGGGTTCC
T ss_pred HHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhC--CCC-------CCCcCHHHHHHHHHHHhCchhcCCc
Confidence 654 48999999998864321111 1111222222 221 1234569999999998876543 27
Q ss_pred CceEEecCCc
Q 047628 216 GKIYELGGPD 225 (327)
Q Consensus 216 ~~~~~v~~~~ 225 (327)
|+++.+.++-
T Consensus 235 G~~i~VDGG~ 244 (247)
T 4hp8_A 235 GAILNVDGGW 244 (247)
T ss_dssp SCEEEESTTG
T ss_pred CCeEEECccc
Confidence 8999998863
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-17 Score=137.44 Aligned_cols=204 Identities=12% Similarity=0.017 Sum_probs=137.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEe-e--CCCCCchhhhcccCCCCCeeEEeeCCCChhHHHH-Hh---ccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVP-F--RGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKA-TM---AKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~-~--R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-~~---~~~d~v 80 (327)
++++||||+|+||++++++|+++|++|+++ . |+.+......... ....+. |..+.+.+.+ +. .++|+|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~---~~~~~~--~~~~v~~~~~~~~~~~g~iD~l 76 (244)
T 1zmo_A 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN---PGTIAL--AEQKPERLVDATLQHGEAIDTI 76 (244)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS---TTEEEC--CCCCGGGHHHHHGGGSSCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh---CCCccc--CHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999999999999999999 6 8765432222221 112222 4444443332 22 357999
Q ss_pred EEccccccc---cC--------cchhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 81 INLIGREYE---TR--------NYSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 81 i~~a~~~~~---~~--------~~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
||+||.... .. -...+++|+.++.++++++. +.+ ..++|++||.......+ ..|+.+|.+.+
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~~ 155 (244)
T 1zmo_A 77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLAYNPLYGPARAATV 155 (244)
T ss_dssp EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTCTTHHHHHHHHH
T ss_pred EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCCCchHHHHHHHHHH
Confidence 999997533 11 13467889999998888774 444 57999999987654433 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCC---hhHH--HHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTED---RLLN--KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~---~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+.. ++++.+++||.+..+.. .... ......... ..+. ..+.+.+|+|++++.++...
T Consensus 156 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~p~-------~r~~~pe~vA~~v~~l~s~~ 227 (244)
T 1zmo_A 156 ALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDR-DVPL-------GRLGRPDEMGALITFLASRR 227 (244)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHH-HCTT-------CSCBCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhc-CCCC-------CCCcCHHHHHHHHHHHcCcc
Confidence 887653 58999999998875532 2111 111111100 0111 23578899999999999865
Q ss_pred CC-CCCceEEecCCc
Q 047628 212 GT-SMGKIYELGGPD 225 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~ 225 (327)
.. ..|+.+.+.++.
T Consensus 228 ~~~~tG~~i~vdgG~ 242 (244)
T 1zmo_A 228 AAPIVGQFFAFTGGY 242 (244)
T ss_dssp TGGGTTCEEEESTTC
T ss_pred ccCccCCEEEeCCCC
Confidence 42 258889888763
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.75 E-value=1.3e-16 Score=135.17 Aligned_cols=212 Identities=13% Similarity=0.082 Sum_probs=147.2
Q ss_pred ccCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 4 VYSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
++..++++||||+| -||.++++.|+++|++|.+..|+.+..... +...+ ..++..+++|+++++++.++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLN-QPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGT-CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 35679999999887 799999999999999999999987653322 22222 2468899999999988877664
Q ss_pred ----cccEEEEcccccccc---------Ccc---hhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHH
Q 047628 76 ----KANVVINLIGREYET---------RNY---SFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVF 136 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~---------~~~---~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~ 136 (327)
.+|++||+||..... ..+ ...++|+.++..+..++...- +-.++|.+||.......| ..|+
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~ 161 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMG 161 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHH
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhH
Confidence 479999999864221 111 234667777777777665432 124899999987654444 7899
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
.+|.+++.+.+.. ++++..+.||.+--+.. ...+.......+.-++. .+...+|+|.+++.
T Consensus 162 asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~---------R~g~peevA~~v~f 232 (256)
T 4fs3_A 162 VAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK---------RNVDQVEVGKTAAY 232 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS---------SCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC---------CCcCHHHHHHHHHH
Confidence 9999998887653 48999999998864421 11223333333222221 23457999999999
Q ss_pred HhhcCCC-CCCceEEecCCc
Q 047628 207 ALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~ 225 (327)
++..... ..|+++.+.++-
T Consensus 233 L~Sd~a~~iTG~~i~VDGG~ 252 (256)
T 4fs3_A 233 LLSDLSSGVTGENIHVDSGF 252 (256)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HhCchhcCccCCEEEECcCH
Confidence 8875432 278999998863
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.74 E-value=2.3e-17 Score=150.54 Aligned_cols=207 Identities=14% Similarity=0.118 Sum_probs=145.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch--hhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP--RHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~--~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+..+++|||||+|.||.+++++|+++|++|++++|+..... ...... ++.++.+|++|++++.++++
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~~~g 286 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV----GGTALTLDVTADDAVDKITAHVTEHHG 286 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence 34679999999999999999999999999999998643211 111111 36789999999998887764
Q ss_pred c-ccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHHc----CCcceEEEEeccCCCC--CCCchHHHhHH
Q 047628 76 K-ANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKEH----GGIMRFIQISCLGASS--SSPSRVFSTKA 140 (327)
Q Consensus 76 ~-~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~~----~~v~~~v~~Ss~~v~~--~~~~~y~~~K~ 140 (327)
+ +|+|||+||...... . ...+++|+.++.++.+++... + ..+||++||..... .....|+.+|.
T Consensus 287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~g~~~YaasKa 365 (454)
T 3u0b_A 287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRGQTNYATTKA 365 (454)
T ss_dssp TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCCCCHHHHHHHH
Confidence 3 899999999854321 1 346789999999999999875 4 56999999975432 23378999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHH-HHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWA-QFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
..+.+.+.. ++++.++.||.+..+....+.... ...... .+ ...+...+|+|++++.++....
T Consensus 366 al~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~-------l~r~g~pedvA~~v~fL~s~~a 436 (454)
T 3u0b_A 366 GMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRL--NS-------LFQGGQPVDVAELIAYFASPAS 436 (454)
T ss_dssp HHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHS--BT-------TSSCBCHHHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhh--cc-------ccCCCCHHHHHHHHHHHhCCcc
Confidence 887776543 599999999998754321111110 001111 01 1234577999999999887543
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|+++++.++.
T Consensus 437 ~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 437 NAVTGNTIRVCGQA 450 (454)
T ss_dssp TTCCSCEEEESSSB
T ss_pred CCCCCcEEEECCcc
Confidence 2 268999998864
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.73 E-value=9.4e-18 Score=147.24 Aligned_cols=157 Identities=17% Similarity=0.146 Sum_probs=121.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccC----CCCCeeEEeeCCCChhHHHHHhcc---
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMG----DLGQIVPMKFNPRDDNTIKATMAK--- 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~--- 76 (327)
.++|+||||+|+||++++++|+++|++|+++.|+....... +...+ ...++.++.+|+++++++.++++.
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 46899999999999999999999999999888875543221 11110 113688999999999999988875
Q ss_pred --ccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 77 --ANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 77 --~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+|+|||+||..... + -...+++|+.++.++++++ ++.+ ..+||++||.......+ ..|+.+|.
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~aSK~ 160 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASKF 160 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCCCChHHHHHHH
Confidence 79999999874221 1 1357789999999999885 4445 67999999987654433 68999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGT 164 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~ 164 (327)
++|.+.+.. ++++++++||.+..+
T Consensus 161 a~~~~~~~la~el~~~gI~v~~v~PG~v~T~ 191 (327)
T 1jtv_A 161 ALEGLCESLAVLLLPFGVHLSLIECGPVHTA 191 (327)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC-
T ss_pred HHHHHHHHHHHHhhhcCcEEEEEEeCcccCh
Confidence 999887653 589999999998754
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.9e-17 Score=144.66 Aligned_cols=200 Identities=16% Similarity=0.096 Sum_probs=136.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC---------CCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG---------CEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~---------~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~ 75 (327)
+..++++||||+|+||+++++.|+++|++|++++|. .++........... -....+|+.+.+++.++++
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~--~~~~~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR--GGKAVANYDSVEAGEKLVK 84 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT--TCEEEEECCCGGGHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh--CCeEEEeCCCHHHHHHHHH
Confidence 456899999999999999999999999999997653 22111111111000 1123589999887665543
Q ss_pred -------cccEEEEcccccccc-----C---cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCC-CCC-CCch
Q 047628 76 -------KANVVINLIGREYET-----R---NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGA-SSS-SPSR 134 (327)
Q Consensus 76 -------~~d~vi~~a~~~~~~-----~---~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v-~~~-~~~~ 134 (327)
.+|+|||+||..... . ....+++|+.++.++.+++ ++.+ ..+||++||... +.. ....
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~~~~~ 163 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQAN 163 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHH
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCCHH
Confidence 589999999975321 1 1346789999988888876 4455 579999999643 322 2378
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|+.+|.+.+.+.+.. ++++.+++||.+ .+..... . +.....+++.+|+|.+++.+
T Consensus 164 Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~------------~-----~~~~~~~~~p~dvA~~~~~l 225 (319)
T 1gz6_A 164 YSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETV------------M-----PEDLVEALKPEYVAPLVLWL 225 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGG------------S-----CHHHHHHSCGGGTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccccc------------C-----ChhhhccCCHHHHHHHHHHH
Confidence 999999998887653 589999999976 2211000 0 00112346789999999998
Q ss_pred hhcCCCCCCceEEecCCc
Q 047628 208 LKDDGTSMGKIYELGGPD 225 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~ 225 (327)
+..+....|+.|++.++.
T Consensus 226 ~s~~~~~tG~~~~v~GG~ 243 (319)
T 1gz6_A 226 CHESCEENGGLFEVGAGW 243 (319)
T ss_dssp TSTTCCCCSCEEEEETTE
T ss_pred hCchhhcCCCEEEECCCe
Confidence 876543268889887753
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=9.3e-18 Score=147.28 Aligned_cols=158 Identities=10% Similarity=0.029 Sum_probs=115.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-------EEEEeeCCCC--CchhhhcccCCCCCeeEEeeCCCChhHHHHHhccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-------QVLVPFRGCE--DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~--~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~ 77 (327)
+|||+||||+||||++++..|+++|+ +|+++++.+. ........+.. ..+.++ +|+.+.+.+.++++++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-~~~~~~-~di~~~~~~~~a~~~~ 81 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-CAFPLL-AGLEATDDPKVAFKDA 81 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-TTCTTE-EEEEEESCHHHHTTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-cccccc-CCeEeccChHHHhCCC
Confidence 47899999999999999999999886 8999988642 11110001100 112333 6776667788889999
Q ss_pred cEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCC--------CC--CCC-chHHHhHHHHH
Q 047628 78 NVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGA--------SS--SSP-SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v--------~~--~~~-~~y~~~K~~~E 143 (327)
|+|||+||.... ..+.++.+.|+.++.++++++++.+ .-.+++++|+... .. ..| ..|+.+|...|
T Consensus 82 D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~e 161 (327)
T 1y7t_A 82 DYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHN 161 (327)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHH
T ss_pred CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHH
Confidence 999999997642 3446788999999999999999874 2237777776430 11 112 67999999999
Q ss_pred HHHHh----hCCCeEEEecCeeecCCC
Q 047628 144 EAVLR----ELPWATIMRPAAMIGTED 166 (327)
Q Consensus 144 ~~~~~----~~~~~~i~r~~~~~G~~~ 166 (327)
++... .+++.+++|++.+||+.+
T Consensus 162 r~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 162 RAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp HHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred HHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 87654 469999999999999854
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1e-15 Score=132.60 Aligned_cols=216 Identities=11% Similarity=0.062 Sum_probs=140.3
Q ss_pred CCcccCCcEEEEEcCC--CccHHHHHHHHHhCCCEEEEeeCCC-----------CCchhhhcccCCC---CCeeEEeeC-
Q 047628 1 MTYVYSGIIATVFGTT--GFLGRYVVQQLAKMGSQVLVPFRGC-----------EDDPRHLKLMGDL---GQIVPMKFN- 63 (327)
Q Consensus 1 ~~~~~~~~~ilI~Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~-----------~~~~~~~~~~~~~---~~v~~~~~D- 63 (327)
|.+.++.++++||||+ |+||++++++|+++|++|++++|++ +.... ....... .....+.+|
T Consensus 2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 80 (297)
T 1d7o_A 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQ-SRVLPDGSLMEIKKVYPLDA 80 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTG-GGBCTTSSBCCEEEEEEECT
T ss_pred CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhh-hhhhccccccccccccccce
Confidence 4566677899999999 9999999999999999999987642 11111 1111100 002333333
Q ss_pred -------CC----C--------hhHHHHHh-------ccccEEEEcccccc--c-----cC---cchhHhhhhHHHHHHH
Q 047628 64 -------PR----D--------DNTIKATM-------AKANVVINLIGREY--E-----TR---NYSFEDVNHFMAERIA 107 (327)
Q Consensus 64 -------l~----~--------~~~~~~~~-------~~~d~vi~~a~~~~--~-----~~---~~~~~~~n~~~~~~l~ 107 (327)
+. + ++++.+++ .++|++||+||... . .+ ....+++|+.++.+++
T Consensus 81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~ 160 (297)
T 1d7o_A 81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL 160 (297)
T ss_dssp TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence 22 1 33444433 25899999998532 1 11 1347789999999999
Q ss_pred HHHHHcC-CcceEEEEeccCCCCCCC---chHHHhHHHHHHHHHh--------hCCCeEEEecCeeecCCCh---hHHHH
Q 047628 108 GIAKEHG-GIMRFIQISCLGASSSSP---SRVFSTKAAAEEAVLR--------ELPWATIMRPAAMIGTEDR---LLNKW 172 (327)
Q Consensus 108 ~a~~~~~-~v~~~v~~Ss~~v~~~~~---~~y~~~K~~~E~~~~~--------~~~~~~i~r~~~~~G~~~~---~~~~~ 172 (327)
+++...- +-.++|++||.......| ..|+.+|.+.+.+.+. .++++.+++||.+.++... ....+
T Consensus 161 ~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~ 240 (297)
T 1d7o_A 161 SHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTM 240 (297)
T ss_dssp HHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHH
T ss_pred HHHHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHH
Confidence 9987641 014899999976543332 4799999999877642 4699999999999877432 12222
Q ss_pred HHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCcc
Q 047628 173 AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
....... .+. ..+.+.+|+|++++.++..... ..|+.+++.++..
T Consensus 241 ~~~~~~~--~p~-------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~ 286 (297)
T 1d7o_A 241 IEYSYNN--API-------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLN 286 (297)
T ss_dssp HHHHHHH--SSS-------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHhhcc--CCC-------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCce
Confidence 2222211 111 1346789999999998875332 2688999998743
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.2e-16 Score=141.57 Aligned_cols=193 Identities=15% Similarity=0.104 Sum_probs=141.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc---hh---hhcccCCCCCeeEEeeCCCChhHHHHHhcc---
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD---PR---HLKLMGDLGQIVPMKFNPRDDNTIKATMAK--- 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~~---~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--- 76 (327)
++++|||||+|.||.+++++|+++|+ .|+++.|+.... .. .+...+ .++.++.+|++|++++.++++.
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g--~~v~~~~~Dvtd~~~v~~~~~~i~~ 316 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLG--VRVTIAACDAADREALAALLAELPE 316 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHTCCT
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcC--CeEEEEEccCCCHHHHHHHHHHHHH
Confidence 37899999999999999999999998 788889874321 11 122222 4689999999999999988863
Q ss_pred ---ccEEEEccccc-ccc-----Cc---chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--CchHHHhHHHH
Q 047628 77 ---ANVVINLIGRE-YET-----RN---YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--PSRVFSTKAAA 142 (327)
Q Consensus 77 ---~d~vi~~a~~~-~~~-----~~---~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~ 142 (327)
+|+|||+||.. ... .. ...+++|+.++.++.+++...+ ..+||++||....... ...|+.+|...
T Consensus 317 ~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~~g~~~YaAaKa~l 395 (496)
T 3mje_A 317 DAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGSGGQPGYAAANAYL 395 (496)
T ss_dssp TSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTCTTCHHHHHHHHHH
T ss_pred hCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCCCCcHHHHHHHHHH
Confidence 69999999986 221 11 3577899999999999999887 7899999996543222 37899999999
Q ss_pred HHHHHh---hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 143 EEAVLR---ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 143 E~~~~~---~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.+.+. .+++++.+.||.+.+.+...-......+.+.+ +..+..++.+.++..++..+..
T Consensus 396 dala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~g-----------~~~l~pe~~~~~l~~~l~~~~~ 458 (496)
T 3mje_A 396 DALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQG-----------VLAMEPEHALGALDQMLENDDT 458 (496)
T ss_dssp HHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHTT-----------EEEECHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhcC-----------CCCCCHHHHHHHHHHHHcCCCc
Confidence 887754 46999999999886543211111111111111 2346779999999999987764
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.63 E-value=1.2e-14 Score=135.00 Aligned_cols=194 Identities=12% Similarity=0.064 Sum_probs=138.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCE-EEEe-eCCCCC-------------chhh---hcccCCCCCeeEEeeCCCCh
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQ-VLVP-FRGCED-------------DPRH---LKLMGDLGQIVPMKFNPRDD 67 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~-~R~~~~-------------~~~~---~~~~~~~~~v~~~~~Dl~~~ 67 (327)
..+++|||||+|.||.++++.|+++|.+ |+++ +|+... .... +...+ .++.++.+|++|+
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~v~~~~~Dvtd~ 327 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLG--ATATVVTCDLTDA 327 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHT--CEEEEEECCTTSH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcC--CEEEEEECCCCCH
Confidence 3578999999999999999999999987 6666 787422 1111 22222 4689999999999
Q ss_pred hHHHHHhcc------ccEEEEccccccccC--------cchhHhhhhHHHHHHHHHHHHcCC----cceEEEEeccCCCC
Q 047628 68 NTIKATMAK------ANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIAKEHGG----IMRFIQISCLGASS 129 (327)
Q Consensus 68 ~~~~~~~~~------~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~~~~~~----v~~~v~~Ss~~v~~ 129 (327)
+++.++++. +|.|||+||...... -...+++|+.++.++.+++..... ..+||++||....-
T Consensus 328 ~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~ 407 (525)
T 3qp9_A 328 EAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW 407 (525)
T ss_dssp HHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred HHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence 999998864 599999999854311 134678899999999999877531 46899999976543
Q ss_pred CCC--chHHHhHHHHHHHHHhh---CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 130 SSP--SRVFSTKAAAEEAVLRE---LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 130 ~~~--~~y~~~K~~~E~~~~~~---~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
..+ ..|+.+|..++.+.... +++++.+.||.+ +.+-..-..........+ ...+..+++++++
T Consensus 408 g~~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~-~tgm~~~~~~~~~~~~~g-----------~~~l~pee~a~~l 475 (525)
T 3qp9_A 408 GGAGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPW-EGSRVTEGATGERLRRLG-----------LRPLAPATALTAL 475 (525)
T ss_dssp CCTTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCB-TTSGGGSSHHHHHHHHTT-----------BCCBCHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCcc-ccccccchhhHHHHHhcC-----------CCCCCHHHHHHHH
Confidence 333 78999999999887654 489999999988 322110011111111111 2457789999999
Q ss_pred HHHhhcCCC
Q 047628 205 TAALKDDGT 213 (327)
Q Consensus 205 ~~~l~~~~~ 213 (327)
..++..+..
T Consensus 476 ~~~l~~~~~ 484 (525)
T 3qp9_A 476 DTALGHGDT 484 (525)
T ss_dssp HHHHHHTCS
T ss_pred HHHHhCCCC
Confidence 999987764
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.61 E-value=6.5e-15 Score=128.86 Aligned_cols=223 Identities=12% Similarity=0.005 Sum_probs=120.1
Q ss_pred cccCCcEEEEEcC--CCccHHHHHHHHHhCCCEEEEeeCCC-----------CCchh--hh---------cccCCCC---
Q 047628 3 YVYSGIIATVFGT--TGFLGRYVVQQLAKMGSQVLVPFRGC-----------EDDPR--HL---------KLMGDLG--- 55 (327)
Q Consensus 3 ~~~~~~~ilI~Ga--tG~iG~~l~~~Ll~~g~~V~~~~R~~-----------~~~~~--~~---------~~~~~~~--- 55 (327)
+.+..+++||||| +|.||+++++.|+++|++|++++|++ +.... .+ .......
T Consensus 5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (319)
T 2ptg_A 5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL 84 (319)
T ss_dssp CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence 4455689999999 89999999999999999999998642 11100 00 0000000
Q ss_pred -CeeEEeeCC------------CC--------hhHHHHHh-------ccccEEEEcccccc--c-----cCc---chhHh
Q 047628 56 -QIVPMKFNP------------RD--------DNTIKATM-------AKANVVINLIGREY--E-----TRN---YSFED 97 (327)
Q Consensus 56 -~v~~~~~Dl------------~~--------~~~~~~~~-------~~~d~vi~~a~~~~--~-----~~~---~~~~~ 97 (327)
....+.+|+ ++ ++++.+++ ..+|++||+||... . ... ...++
T Consensus 85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~ 164 (319)
T 2ptg_A 85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS 164 (319)
T ss_dssp CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence 023444432 22 22444433 25799999998532 1 111 34678
Q ss_pred hhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC---chHHHhHHHHHHHHHh--------hCCCeEEEecCeeecCC
Q 047628 98 VNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP---SRVFSTKAAAEEAVLR--------ELPWATIMRPAAMIGTE 165 (327)
Q Consensus 98 ~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~---~~y~~~K~~~E~~~~~--------~~~~~~i~r~~~~~G~~ 165 (327)
+|+.++.++++++...- +-.++|++||.......+ ..|+.+|.+++.+.+. .++++.+++||.+..+.
T Consensus 165 vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~ 244 (319)
T 2ptg_A 165 SSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRA 244 (319)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---
T ss_pred HhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChh
Confidence 99999999999987641 014899999987654333 4799999988776642 46999999999886442
Q ss_pred ChhHHH-HHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CCCCceEEecCCcc
Q 047628 166 DRLLNK-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TSMGKIYELGGPDI 226 (327)
Q Consensus 166 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~~~~v~~~~~ 226 (327)
...... ...... ...............+...+|+|++++.++.... ...|+.+.+.++..
T Consensus 245 ~~~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~ 306 (319)
T 2ptg_A 245 ASAIGKAGDKTFI-DLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH 306 (319)
T ss_dssp -----------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred hhhcccccchhhH-HHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence 111100 000000 0000000000011235688999999999987533 22688999988754
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2e-14 Score=125.44 Aligned_cols=214 Identities=14% Similarity=0.056 Sum_probs=134.9
Q ss_pred cccCCcEEEEEcC--CCccHHHHHHHHHhCCCEEEEeeCCC-----------CCchhhhcccCCCC---CeeEEeeC---
Q 047628 3 YVYSGIIATVFGT--TGFLGRYVVQQLAKMGSQVLVPFRGC-----------EDDPRHLKLMGDLG---QIVPMKFN--- 63 (327)
Q Consensus 3 ~~~~~~~ilI~Ga--tG~iG~~l~~~Ll~~g~~V~~~~R~~-----------~~~~~~~~~~~~~~---~v~~~~~D--- 63 (327)
+.++.++++|||| +|.||++++++|+++|++|++++|++ .... ......... .+..+.+|
T Consensus 5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~ 83 (315)
T 2o2s_A 5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLD-EDRKLPDGSLIEFAGVYPLDAAF 83 (315)
T ss_dssp CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTH-HHHBCTTSCBCCCSCEEECCTTC
T ss_pred ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhh-hhhhhhccccccccccccccccc
Confidence 3455689999999 89999999999999999999998753 1111 111111000 12344443
Q ss_pred ---------CCC--------hhHHHHHh-------ccccEEEEcccccc--c-----cCc---chhHhhhhHHHHHHHHH
Q 047628 64 ---------PRD--------DNTIKATM-------AKANVVINLIGREY--E-----TRN---YSFEDVNHFMAERIAGI 109 (327)
Q Consensus 64 ---------l~~--------~~~~~~~~-------~~~d~vi~~a~~~~--~-----~~~---~~~~~~n~~~~~~l~~a 109 (327)
+++ ++++.+++ .++|++||+||... . .+. ...+++|+.++.+++++
T Consensus 84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 163 (315)
T 2o2s_A 84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQH 163 (315)
T ss_dssp SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHH
Confidence 222 33444443 35899999998542 1 111 34678899999999999
Q ss_pred HHHcC-CcceEEEEeccCCCCCCC---chHHHhHHHHHHHHHh--------hCCCeEEEecCeeecCCC---------hh
Q 047628 110 AKEHG-GIMRFIQISCLGASSSSP---SRVFSTKAAAEEAVLR--------ELPWATIMRPAAMIGTED---------RL 168 (327)
Q Consensus 110 ~~~~~-~v~~~v~~Ss~~v~~~~~---~~y~~~K~~~E~~~~~--------~~~~~~i~r~~~~~G~~~---------~~ 168 (327)
+...- +-.++|++||.......+ ..|+.+|.+.+.+.+. .++++..++||.+..+.. .+
T Consensus 164 ~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~ 243 (315)
T 2o2s_A 164 FGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSF 243 (315)
T ss_dssp HSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCH
T ss_pred HHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchh
Confidence 86541 014899999976653333 3799999998877642 469999999998853210 00
Q ss_pred HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCcc
Q 047628 169 LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
...+....... .+. ..+...+|+|++++.++..... ..|+.+.+.++..
T Consensus 244 ~~~~~~~~~~~--~p~-------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~ 293 (315)
T 2o2s_A 244 IDYAIDYSYNN--APL-------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLH 293 (315)
T ss_dssp HHHHHHHHHHH--SSS-------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhcc--CCC-------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCee
Confidence 01111111110 111 1346789999999999875332 2688999988743
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.60 E-value=1.7e-15 Score=143.52 Aligned_cols=200 Identities=14% Similarity=0.056 Sum_probs=130.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC---------CCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR---------GCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R---------~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~ 74 (327)
.+..++++||||+|.||++++++|+++|++|++++| +.+........... ....+.+|+.+.+++.+++
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~D~~d~~~~~~~~ 93 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK--AGGEAVADYNSVIDGAKVI 93 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH--TTCCEEECCCCGGGHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH--hCCeEEEEeCCHHHHHHHH
Confidence 355689999999999999999999999999999988 32222221111110 0112358999988887776
Q ss_pred c-------cccEEEEccccccccC--------cchhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC--CCc
Q 047628 75 A-------KANVVINLIGREYETR--------NYSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS--SPS 133 (327)
Q Consensus 75 ~-------~~d~vi~~a~~~~~~~--------~~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~--~~~ 133 (327)
+ .+|++||+||...... -...+++|+.++.++.+++ ++.+ ..++|++||...... ...
T Consensus 94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~~~~~ 172 (613)
T 3oml_A 94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNFGQV 172 (613)
T ss_dssp C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCCTTCH
T ss_pred HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCCCh
Confidence 5 4799999999753321 1357789999999998887 4444 569999999654322 237
Q ss_pred hHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 134 RVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 134 ~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
.|+.+|.+.+.+.+.. ++.+..+.|+.+-...... . +......+..+|+|.+++.
T Consensus 173 ~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~-------------~-----~~~~~~~~~pedvA~~v~~ 234 (613)
T 3oml_A 173 NYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGI-------------L-----PDILFNELKPKLIAPVVAY 234 (613)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCC-------------C-----CHHHHTTCCGGGTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhc-------------c-----chhhhhcCCHHHHHHHHHH
Confidence 8999999999887654 4888999998532100000 0 0112234577999999999
Q ss_pred HhhcCCCCCCceEEecCC
Q 047628 207 ALKDDGTSMGKIYELGGP 224 (327)
Q Consensus 207 ~l~~~~~~~~~~~~v~~~ 224 (327)
++.......|+.+++.++
T Consensus 235 L~s~~~~~tG~~i~vdGG 252 (613)
T 3oml_A 235 LCHESCEDNGSYIESAAG 252 (613)
T ss_dssp TTSTTCCCCSCEEEEETT
T ss_pred hcCCCcCCCceEEEECCC
Confidence 887654226778877654
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.58 E-value=7.3e-14 Score=122.65 Aligned_cols=155 Identities=13% Similarity=0.107 Sum_probs=110.1
Q ss_pred CcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCC---------CCc---hhhhcccC-CCCCeeEEeeCCCCh--h-
Q 047628 7 GIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGC---------EDD---PRHLKLMG-DLGQIVPMKFNPRDD--N- 68 (327)
Q Consensus 7 ~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~---------~~~---~~~~~~~~-~~~~v~~~~~Dl~~~--~- 68 (327)
.++++||||++ .||.+++++|+++|++|++..|++ ++. .......+ ....+..+.+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 47899999875 999999999999999999766553 111 11111111 113467888888776 5
Q ss_pred -----------------HHHHHhc-------cccEEEEcccccc--cc-----C---cchhHhhhhHHHHHHHHHHHHcC
Q 047628 69 -----------------TIKATMA-------KANVVINLIGREY--ET-----R---NYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 69 -----------------~~~~~~~-------~~d~vi~~a~~~~--~~-----~---~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
++.++++ .+|++||+||... .. + -...+++|+.++..+.+++...-
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 5555543 4799999998631 11 1 13577899999999999887642
Q ss_pred Cc--ceEEEEeccCCCCCCC--c-hHHHhHHHHHHHHH-------h-hCCCeEEEecCeee
Q 047628 115 GI--MRFIQISCLGASSSSP--S-RVFSTKAAAEEAVL-------R-ELPWATIMRPAAMI 162 (327)
Q Consensus 115 ~v--~~~v~~Ss~~v~~~~~--~-~y~~~K~~~E~~~~-------~-~~~~~~i~r~~~~~ 162 (327)
. .++|++||.......| . .|+.+|.+.+.+.+ . .++.+..+.||.+-
T Consensus 162 -~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~ 221 (329)
T 3lt0_A 162 -KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp -EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred -hhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceee
Confidence 1 3899999976654433 3 89999999887764 2 47999999999885
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.48 E-value=8e-13 Score=135.02 Aligned_cols=223 Identities=14% Similarity=0.018 Sum_probs=145.9
Q ss_pred ccCCcEEEEEcCCCc-cHHHHHHHHHhCCCEEEEee-CCCCCchh---hh-cccC-CCCCeeEEeeCCCChhHHHHHhc-
Q 047628 4 VYSGIIATVFGTTGF-LGRYVVQQLAKMGSQVLVPF-RGCEDDPR---HL-KLMG-DLGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~-iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~---~~-~~~~-~~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
.++.+++|||||+|. ||.++++.|++.|++|++++ |+.+.... .+ .... ...++.++.+|++|.+++.++++
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 345689999999999 99999999999999999986 44333211 11 1111 11468899999999998887763
Q ss_pred ----------cccEEEEcccccccc-----Cc------chhHhhhhHHHHHHHHHHHHcC-----CcceEEEEeccCCCC
Q 047628 76 ----------KANVVINLIGREYET-----RN------YSFEDVNHFMAERIAGIAKEHG-----GIMRFIQISCLGASS 129 (327)
Q Consensus 76 ----------~~d~vi~~a~~~~~~-----~~------~~~~~~n~~~~~~l~~a~~~~~-----~v~~~v~~Ss~~v~~ 129 (327)
.+|+|||+||..... .. ...+++|+.++.+++++++... +-.+||++||.....
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 479999999975322 11 3467889999988887743221 025899999976544
Q ss_pred CCCchHHHhHHHHHHHHHhh-------CCCeEEEecCeee-cCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHH
Q 047628 130 SSPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMI-GTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201 (327)
Q Consensus 130 ~~~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 201 (327)
.....|+.+|..++.+.+.. .+++..+.||++- .+.............. .+ ..+...+|+|
T Consensus 809 gg~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~---~p--------lr~~sPeEVA 877 (1878)
T 2uv9_A 809 GNDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEK---LG--------VRTFSQQEMA 877 (1878)
T ss_dssp SCCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHT---TT--------CCCBCHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHh---cC--------CCCCCHHHHH
Confidence 45678999999998875431 1788899999886 2211111111111111 11 1234789999
Q ss_pred HHHHHHhhcCC--CCCCceEEec--CCcc--ccHHHHHHHHH
Q 047628 202 AAVTAALKDDG--TSMGKIYELG--GPDI--FTVHELAELMY 237 (327)
Q Consensus 202 ~~~~~~l~~~~--~~~~~~~~v~--~~~~--~s~~el~~~i~ 237 (327)
.+++.++.... ...|+.+.+. ++.. ..+.++...+.
T Consensus 878 ~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~lr 919 (1878)
T 2uv9_A 878 FNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKLR 919 (1878)
T ss_dssp HHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHHH
T ss_pred HHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHHH
Confidence 99998886543 1146777763 5432 45666665544
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=8.5e-13 Score=135.08 Aligned_cols=219 Identities=12% Similarity=0.054 Sum_probs=145.6
Q ss_pred ccCCcEEEEEcCCCc-cHHHHHHHHHhCCCEEEEe-eCCCCCchhhhc----ccC-CCCCeeEEeeCCCChhHHHHHhc-
Q 047628 4 VYSGIIATVFGTTGF-LGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLK----LMG-DLGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~-iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~----~~~-~~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
.++.+++|||||+|. ||.++++.|++.|++|+++ .|+.+....... ... ...++.++.+|+++++++.++++
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 345678999999998 9999999999999999998 455443222111 111 11468899999999998877653
Q ss_pred ------------cccEEEEcccccccc------C--c---chhHhhhhHHHHHHHHHHHHcCC-----cceEEEEeccCC
Q 047628 76 ------------KANVVINLIGREYET------R--N---YSFEDVNHFMAERIAGIAKEHGG-----IMRFIQISCLGA 127 (327)
Q Consensus 76 ------------~~d~vi~~a~~~~~~------~--~---~~~~~~n~~~~~~l~~a~~~~~~-----v~~~v~~Ss~~v 127 (327)
.+|++||+||..... . . ...+++|+.++..++++++.... -.+||++||...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 489999999975322 1 1 34678899999999998754321 248999999766
Q ss_pred CCCCCchHHHhHHHHHHH-HHhh----C--CCeEEEecCeeecCC--C--hhHHHHHHHHhhcCceeeecCCCceeccee
Q 047628 128 SSSSPSRVFSTKAAAEEA-VLRE----L--PWATIMRPAAMIGTE--D--RLLNKWAQFVKKFNFFPLFGDGSTRIQPVY 196 (327)
Q Consensus 128 ~~~~~~~y~~~K~~~E~~-~~~~----~--~~~~i~r~~~~~G~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 196 (327)
.......|+.+|.+.+.+ .+.. + +++..+.||.+-+.+ . ..... ... . .+ ..+..
T Consensus 832 ~~gg~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~---~~~-~--~p--------lr~~s 897 (1887)
T 2uv8_A 832 TFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE---GIE-K--MG--------VRTFS 897 (1887)
T ss_dssp CSSCBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHH---HHH-T--TS--------CCCEE
T ss_pred ccCCCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHH---HHH-h--cC--------CCCCC
Confidence 544557899999999887 3321 2 778899999887421 0 11111 111 1 11 13347
Q ss_pred HHHHHHHHHHHhhcC-C-CCCCceEEec--CCcc--ccHHHHHHHH
Q 047628 197 VVDVAAAVTAALKDD-G-TSMGKIYELG--GPDI--FTVHELAELM 236 (327)
Q Consensus 197 ~~D~a~~~~~~l~~~-~-~~~~~~~~v~--~~~~--~s~~el~~~i 236 (327)
.+|+|.+++.++... . ...|+.+.+. ++.. ..+.++...+
T Consensus 898 PEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~l 943 (1887)
T 2uv8_A 898 QKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL 943 (1887)
T ss_dssp HHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHH
Confidence 899999999988765 1 1136677663 4432 3455555444
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.42 E-value=2.1e-12 Score=121.88 Aligned_cols=218 Identities=19% Similarity=0.156 Sum_probs=143.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC-chhhhcccCCCCCeeEEeeCC-CChhHHHH----Hhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNP-RDDNTIKA----TMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~~~~~~~~~~v~~~~~Dl-~~~~~~~~----~~~~~d 78 (327)
++.+.++||||++-||+.+++.|+++|++|++.+|.... ....+...+ .++..+.+|+ .+.+.+.+ .+..+|
T Consensus 320 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g--~~~~~~~~Dv~~~~~~~~~~~~~~~G~iD 397 (604)
T 2et6_A 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAG--GEAWPDQHDVAKDSEAIIKNVIDKYGTID 397 (604)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTT--CEEEEECCCHHHHHHHHHHHHHHHHSCCC
T ss_pred cCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcC--CeEEEEEcChHHHHHHHHHHHHHhcCCCC
Confidence 456789999999999999999999999999998864221 112222222 3466778888 55444322 234589
Q ss_pred EEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCC--CchHHHhHHHHHH
Q 047628 79 VVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSS--PSRVFSTKAAAEE 144 (327)
Q Consensus 79 ~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E~ 144 (327)
++||+||..... +. ...+++|+.++..+.+++. +.+ -.++|++||....... ...|+.+|.++..
T Consensus 398 iLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~~~~~Y~asKaal~~ 476 (604)
T 2et6_A 398 ILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSSKAGILG 476 (604)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTBHHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCChhHHHHHHHHHH
Confidence 999999975321 11 3477899998888877764 333 3589999996543222 3689999999988
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
+.+.. ++++..+.||. .. ....... . . ........+|+|.+++.++.......|+
T Consensus 477 lt~~la~El~~~gIrVn~v~PG~--~T--~m~~~~~---~-~----------~~~~~~~pe~vA~~v~~L~s~~~~itG~ 538 (604)
T 2et6_A 477 LSKTMAIEGAKNNIKVNIVAPHA--ET--AMTLSIM---R-E----------QDKNLYHADQVAPLLVYLGTDDVPVTGE 538 (604)
T ss_dssp HHHHHHHHHGGGTEEEEEEEECC--CC--CC-----------------------CCSSCGGGTHHHHHHTTSTTCCCCSC
T ss_pred HHHHHHHHhCccCeEEEEEcCCC--CC--ccccccC---c-h----------hhccCCCHHHHHHHHHHHhCCccCCCCc
Confidence 77643 48899999983 11 1111100 0 0 0012346799999999888653323688
Q ss_pred eEEecCCc-----------------cccHHHHHHHHHHHhhcC
Q 047628 218 IYELGGPD-----------------IFTVHELAELMYDTIREY 243 (327)
Q Consensus 218 ~~~v~~~~-----------------~~s~~el~~~i~~~~g~~ 243 (327)
++.+.++. ..+..++.+.+.+.....
T Consensus 539 ~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 581 (604)
T 2et6_A 539 TFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT 581 (604)
T ss_dssp EEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred EEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence 88887652 357778887777776543
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.41 E-value=5.6e-13 Score=132.46 Aligned_cols=223 Identities=12% Similarity=0.041 Sum_probs=143.7
Q ss_pred ccCCcEEEEEcCCCc-cHHHHHHHHHhCCCEEEEe-eCCCCCchhhhccc----C-CCCCeeEEeeCCCChhHHHHHhc-
Q 047628 4 VYSGIIATVFGTTGF-LGRYVVQQLAKMGSQVLVP-FRGCEDDPRHLKLM----G-DLGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~-iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~----~-~~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
.++.+++|||||+|. ||+++++.|++.|++|+++ .|+.+......... . ...++.++.+|+++++++.++++
T Consensus 473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~ 552 (1688)
T 2pff_A 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 552 (1688)
T ss_dssp CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 345678999999998 9999999999999999998 56554433222221 1 12368889999999988877653
Q ss_pred ------------cccEEEEcccccccc------C--c---chhHhhhhHHHHHHHHHHHHcC-----CcceEEEEeccCC
Q 047628 76 ------------KANVVINLIGREYET------R--N---YSFEDVNHFMAERIAGIAKEHG-----GIMRFIQISCLGA 127 (327)
Q Consensus 76 ------------~~d~vi~~a~~~~~~------~--~---~~~~~~n~~~~~~l~~a~~~~~-----~v~~~v~~Ss~~v 127 (327)
.+|+|||+||..... . . ...+++|+.++.+++++++... +-.+||++||...
T Consensus 553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG 632 (1688)
T 2pff_A 553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 632 (1688)
T ss_dssp HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence 489999999974322 1 1 3467889999999998874321 0248999999765
Q ss_pred CCCCCchHHHhHHHHHHHHHh-h----C--CCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 128 SSSSPSRVFSTKAAAEEAVLR-E----L--PWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 128 ~~~~~~~y~~~K~~~E~~~~~-~----~--~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
.......|+.+|.+.+.+... . + +++..+.||.+-|.+- ... .. .. ..... .........+|+
T Consensus 633 ~~Gg~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M--~~~-~e-~~-~~~l~-----~iplR~~sPEEV 702 (1688)
T 2pff_A 633 TFGGDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGL--MSA-NN-II-AEGIE-----KMGVRTFSQKEM 702 (1688)
T ss_dssp TSSCBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSS--SCT-TT-TC-STTTS-----SSSCCCCCCCTT
T ss_pred ccCCchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcc--cCC-ch-HH-HHHHH-----hCCCCCCCHHHH
Confidence 544557899999999998432 2 1 5667788888764211 000 00 00 00000 011123467999
Q ss_pred HHHHHHHhhcCC--CCCCceEEec--CCcc--ccHHHHHHHH
Q 047628 201 AAAVTAALKDDG--TSMGKIYELG--GPDI--FTVHELAELM 236 (327)
Q Consensus 201 a~~~~~~l~~~~--~~~~~~~~v~--~~~~--~s~~el~~~i 236 (327)
|.+++.++.... ...|+.+.+. ++.. .++.++...+
T Consensus 703 A~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~~~dl~ella~l 744 (1688)
T 2pff_A 703 AFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL 744 (1688)
T ss_dssp HHHHHHHTSTTHHHHHTTSCCCCCCSCSGGGSSSHHHHHHHH
T ss_pred HHHHHHHhCCCccccccCcEEEEEcCCCeeecCCHHHHHHHH
Confidence 999999887651 1136666653 4432 3455554443
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.40 E-value=7e-13 Score=98.13 Aligned_cols=96 Identities=18% Similarity=0.148 Sum_probs=77.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
++|+|+|+|+ |++|+.+++.|++.| ++|++++|++++... +.. .++..+.+|+.+.+.+.++++++|+|||++
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~-~~~----~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~ 77 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV-LNR----MGVATKQVDAKDEAGLAKALGGFDAVISAA 77 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH-HHT----TTCEEEECCTTCHHHHHHHTTTCSEEEECS
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH-HHh----CCCcEEEecCCCHHHHHHHHcCCCEEEECC
Confidence 4579999999 999999999999999 999999998655322 221 357888999999999999999999999999
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
+.. ...++++++.+.| ++++.+.
T Consensus 78 ~~~--------------~~~~~~~~~~~~g-~~~~~~~ 100 (118)
T 3ic5_A 78 PFF--------------LTPIIAKAAKAAG-AHYFDLT 100 (118)
T ss_dssp CGG--------------GHHHHHHHHHHTT-CEEECCC
T ss_pred Cch--------------hhHHHHHHHHHhC-CCEEEec
Confidence 642 1367899999998 7655433
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.38 E-value=4.1e-12 Score=112.95 Aligned_cols=194 Identities=12% Similarity=0.031 Sum_probs=126.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHh-CCCEEEEeeCCCCCchh---------------hhcccCCCCCeeEEeeCCCChhH
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAK-MGSQVLVPFRGCEDDPR---------------HLKLMGDLGQIVPMKFNPRDDNT 69 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~---------------~~~~~~~~~~v~~~~~Dl~~~~~ 69 (327)
..+++|||||++-||.++++.|++ .|.+|.++.|+.+.... .+...+ .++..+.+|++++++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G--~~a~~i~~Dvtd~~~ 137 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG--LYSKSINGDAFSDAA 137 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT--CCEEEEESCTTSHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC--CcEEEEEecCCCHHH
Confidence 357899999999999999999999 99999999998765321 122222 357889999999987
Q ss_pred HHHHh--------ccccEEEEcccccc------------cc---------------------------Ccc---hhHhhh
Q 047628 70 IKATM--------AKANVVINLIGREY------------ET---------------------------RNY---SFEDVN 99 (327)
Q Consensus 70 ~~~~~--------~~~d~vi~~a~~~~------------~~---------------------------~~~---~~~~~n 99 (327)
+.+++ ..+|++||+||... .. +.+ ..+++|
T Consensus 138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn 217 (422)
T 3s8m_A 138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM 217 (422)
T ss_dssp HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence 76654 34799999998620 00 011 122333
Q ss_pred hHHHH-HHHHHHHHcCC---cceEEEEeccCCCCCCC----chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecC
Q 047628 100 HFMAE-RIAGIAKEHGG---IMRFIQISCLGASSSSP----SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGT 164 (327)
Q Consensus 100 ~~~~~-~l~~a~~~~~~---v~~~v~~Ss~~v~~~~~----~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~ 164 (327)
..+.. .+++++..... -.++|.+||.+.....| ..|+.+|.+++.+.+.. ++++.++.||.+--+
T Consensus 218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~ 297 (422)
T 3s8m_A 218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297 (422)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence 33332 45555543320 13799999987643333 57899999999887654 489999999988755
Q ss_pred CChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 165 EDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 165 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
....+ +.+..... .++.-.|. .+|+++++..++...-
T Consensus 298 ~~~~ip~~~~~~~~~~--~~m~r~G~---------pEdva~~v~~L~sd~l 337 (422)
T 3s8m_A 298 ASAAIPVMPLYISMVY--KIMKEKGL---------HEGTIEQLDRLFRERL 337 (422)
T ss_dssp TGGGSTHHHHHHHHHH--HHHHHTTC---------CCCHHHHHHHHHHHTT
T ss_pred hhhcCCCChHHHHHHH--hhhcCCcC---------hHHHHHHHHHHhcchh
Confidence 33222 22221111 12222222 2789999999887653
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2.8e-11 Score=106.72 Aligned_cols=252 Identities=13% Similarity=0.027 Sum_probs=149.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHh-CCCEEEEeeCCCCCchh---------------hhcccCCCCCeeEEeeCCCChhHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAK-MGSQVLVPFRGCEDDPR---------------HLKLMGDLGQIVPMKFNPRDDNTI 70 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~~~---------------~~~~~~~~~~v~~~~~Dl~~~~~~ 70 (327)
.+++|||||++-||.++++.|++ .|.+|.++.|+.+.... .+...+ .++..+.+|+++++++
T Consensus 47 gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G--~~a~~i~~Dvtd~~~v 124 (405)
T 3zu3_A 47 PKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG--LYAKSINGDAFSDEIK 124 (405)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT--CCEEEEESCTTSHHHH
T ss_pred CCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC--CceEEEECCCCCHHHH
Confidence 57899999999999999999999 99999999987655321 112222 3578899999999888
Q ss_pred HHHhc-------cccEEEEccccccc-------------c--------------------------Cc---chhHhhhhH
Q 047628 71 KATMA-------KANVVINLIGREYE-------------T--------------------------RN---YSFEDVNHF 101 (327)
Q Consensus 71 ~~~~~-------~~d~vi~~a~~~~~-------------~--------------------------~~---~~~~~~n~~ 101 (327)
.++++ .+|++||+||.... . +. ...+++|..
T Consensus 125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~ 204 (405)
T 3zu3_A 125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG 204 (405)
T ss_dssp HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence 77664 36999999986310 0 11 123344544
Q ss_pred HHH-HHHHHHHHcCC---cceEEEEeccCCCCCCC----chHHHhHHHHHHHHHh-------h-CCCeEEEecCeeecCC
Q 047628 102 MAE-RIAGIAKEHGG---IMRFIQISCLGASSSSP----SRVFSTKAAAEEAVLR-------E-LPWATIMRPAAMIGTE 165 (327)
Q Consensus 102 ~~~-~l~~a~~~~~~---v~~~v~~Ss~~v~~~~~----~~y~~~K~~~E~~~~~-------~-~~~~~i~r~~~~~G~~ 165 (327)
+.. .+++++....- -.++|.+||.+.....| ..|+.+|.+++.+.+. . ++++.++.||.+--+.
T Consensus 205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~ 284 (405)
T 3zu3_A 205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA 284 (405)
T ss_dssp HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence 443 44555443220 13799999986643322 6799999999888764 3 5788999999876431
Q ss_pred Ch---hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcc--ccHHHHHHHHHHHh
Q 047628 166 DR---LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDI--FTVHELAELMYDTI 240 (327)
Q Consensus 166 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~--~s~~el~~~i~~~~ 240 (327)
.. ..+.+.....+ ++.-.|. .+|+++++.+++...-. +....+.++.. +.-.||-+.+.+..
T Consensus 285 s~~ip~~p~y~~~l~~--~mkr~G~---------~Ed~a~~i~~L~sd~l~--~~~~~~D~~~~~r~d~~e~~~~~q~~~ 351 (405)
T 3zu3_A 285 SSAIPMMPLYLSLLFK--VMKEKGT---------HEGCIEQVYSLYKDSLC--GDSPHMDQEGRLRADYKELDPEVQNQV 351 (405)
T ss_dssp HHTSTTHHHHHHHHHH--HHHHHTC---------CCCHHHHHHHHHHHTTS--SSCCCBCTTSCEECCHHHHCHHHHHHH
T ss_pred hhcCCCCcHHHHHHHH--HHhcCCC---------cHHHHHHHHHHHhcccc--CCCCCcCCCcCCCCchhhcCHHHHHHH
Confidence 11 11222221111 2222222 27899999999886432 44334444333 33455555554443
Q ss_pred hcCC-ccccCChHHHHHhhhHHHHHhhhCCCCCC
Q 047628 241 REYP-HYVKVPFPVAKAVAMPREILLKKVPFPLP 273 (327)
Q Consensus 241 g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (327)
..-. .+..-....+.........+.++++|..+
T Consensus 352 ~~~~~~~~~~~~~~~~d~~~~~~~f~~~~gf~~~ 385 (405)
T 3zu3_A 352 QQLWDQVTNDNIYQLTDFVGYKSEFLNLFGFGID 385 (405)
T ss_dssp HHHHHHCCTTTHHHHCCHHHHHHHHHHHTTCSCT
T ss_pred HHHHHHhccccccccccHHHHHHHHHHhcCCCCC
Confidence 2111 11222222222233344455566665443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.2e-11 Score=114.90 Aligned_cols=217 Identities=18% Similarity=0.156 Sum_probs=138.5
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC---------CCchhhhcccC-CCCCeeEEeeCCCChhHHHH
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC---------EDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~---------~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~ 72 (327)
+.+..+.++||||++-||+++++.|+++|++|++.+|+. +.......+.. ...++ .+|+.|.+++.+
T Consensus 4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~ 80 (604)
T 2et6_A 4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK 80 (604)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence 345568899999999999999999999999999998764 11111111111 00122 346665533322
Q ss_pred H-------hccccEEEEcccccccc-----Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC--C
Q 047628 73 T-------MAKANVVINLIGREYET-----RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS--S 131 (327)
Q Consensus 73 ~-------~~~~d~vi~~a~~~~~~-----~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~--~ 131 (327)
+ +..+|++||+||..... +. ...+++|+.++..+.+++. +.+ -.++|.+||...... .
T Consensus 81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~~~ 159 (604)
T 2et6_A 81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFG 159 (604)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCCCC
Confidence 2 33589999999974321 11 3477889998888877653 333 358999999654222 2
Q ss_pred CchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 132 PSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 132 ~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
...|+.+|.++..+.+.. ++++..+.|+. . ...... . .+ .........+|+|.++
T Consensus 160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg~-~---T~m~~~----~-----~~-----~~~~~~~~pe~vA~~v 221 (604)
T 2et6_A 160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPLA-R---SRMTES----I-----MP-----PPMLEKLGPEKVAPLV 221 (604)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-C---CHHHHT----T-----SC-----HHHHTTCSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccCC-c---Cccccc----c-----CC-----hhhhccCCHHHHHHHH
Confidence 368999999998877653 48889999962 1 111110 0 00 0011235789999999
Q ss_pred HHHhhcCCCCCCceEEecCC------------------ccccHHHHHHHHHHHhh
Q 047628 205 TAALKDDGTSMGKIYELGGP------------------DIFTVHELAELMYDTIR 241 (327)
Q Consensus 205 ~~~l~~~~~~~~~~~~v~~~------------------~~~s~~el~~~i~~~~g 241 (327)
+.++.......|+++.+.++ +..+..++.+.+.+...
T Consensus 222 ~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 276 (604)
T 2et6_A 222 LYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD 276 (604)
T ss_dssp HHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred HHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence 99987653336788887664 23567788777776543
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=8.4e-11 Score=105.31 Aligned_cols=204 Identities=8% Similarity=-0.044 Sum_probs=126.8
Q ss_pred CCcEEEEEcCCCccHHH--HHHHHHhCCCEEEEeeCCCCCch-----------hhh----cccCCCCCeeEEeeCCCChh
Q 047628 6 SGIIATVFGTTGFLGRY--VVQQLAKMGSQVLVPFRGCEDDP-----------RHL----KLMGDLGQIVPMKFNPRDDN 68 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~--l~~~Ll~~g~~V~~~~R~~~~~~-----------~~~----~~~~~~~~v~~~~~Dl~~~~ 68 (327)
..+++|||||++-||.+ ++++|.+.|++|+++.|+..... ..+ ...+ .++..+.+|+++++
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dvtd~~ 136 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG--LVAKNFIEDAFSNE 136 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT--CCEEEEESCTTCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC--CcEEEEEeeCCCHH
Confidence 36889999999999999 99999999999999999765421 111 1122 35888999999998
Q ss_pred HHHHHhc-------cccEEEEccccccc---------------c------------------------Ccc---hhHhhh
Q 047628 69 TIKATMA-------KANVVINLIGREYE---------------T------------------------RNY---SFEDVN 99 (327)
Q Consensus 69 ~~~~~~~-------~~d~vi~~a~~~~~---------------~------------------------~~~---~~~~~n 99 (327)
++.++++ .+|++||+||.... - ..+ ...++|
T Consensus 137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn 216 (418)
T 4eue_A 137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence 8877664 36999999986310 0 011 122223
Q ss_pred hHHHH-HHHHHHHHcCC---cceEEEEeccCCCCCCC----chHHHhHHHHHHHHHh--------hCCCeEEEecCeeec
Q 047628 100 HFMAE-RIAGIAKEHGG---IMRFIQISCLGASSSSP----SRVFSTKAAAEEAVLR--------ELPWATIMRPAAMIG 163 (327)
Q Consensus 100 ~~~~~-~l~~a~~~~~~---v~~~v~~Ss~~v~~~~~----~~y~~~K~~~E~~~~~--------~~~~~~i~r~~~~~G 163 (327)
..+.. .+++++...+. -.++|.+||.+.....| ..|+.+|.+++.+.+. .++++.++.||.+--
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T 296 (418)
T 4eue_A 217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT 296 (418)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence 22222 44555443320 13789999876543322 6799999998887643 468899999998864
Q ss_pred CCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecC
Q 047628 164 TED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG 223 (327)
Q Consensus 164 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~ 223 (327)
+.. ...+.+.....+ .+.-.|. .+|+++++.+++...-. .|+...+.+
T Consensus 297 ~~s~~ip~~p~y~~~~~~--~mk~~G~---------~E~v~e~~~~L~sd~~~-~g~~~~~D~ 347 (418)
T 4eue_A 297 KASAYIPTFPLYAAILYK--VMKEKNI---------HENCIMQIERMFSEKIY-SNEKIQFDD 347 (418)
T ss_dssp HHHHTSTTHHHHHHHHHH--HHHHTTC---------CCCHHHHHHHHHHHTTS-SSSCCCCCT
T ss_pred hhhhcCCCCcHHHHHHHH--HHhhcCC---------hHHHHHHHHHHhhcccc-CCCccccCC
Confidence 311 111111111110 1111122 37899999999887554 444434444
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.5e-11 Score=119.55 Aligned_cols=191 Identities=11% Similarity=0.058 Sum_probs=134.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHH-hCCC-EEEEeeCCCCC---chhhhcccC-CCCCeeEEeeCCCChhHHHHHhcc----
Q 047628 7 GIIATVFGTTGFLGRYVVQQLA-KMGS-QVLVPFRGCED---DPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMAK---- 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll-~~g~-~V~~~~R~~~~---~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~---- 76 (327)
.++++||||+|.||+.++++|. ++|. .|++++|+... ......++. ...++.++.+|++|++++.++++.
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~ 609 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDE 609 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999 7898 59999998432 222222111 124689999999999999988864
Q ss_pred --ccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC--CCCchHHHhHHHHHH
Q 047628 77 --ANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS--SSPSRVFSTKAAAEE 144 (327)
Q Consensus 77 --~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~--~~~~~y~~~K~~~E~ 144 (327)
+|.|||+||...... . ...+++|+.++.++.+++. .. . +||.+||..... .....|+.+|...+.
T Consensus 610 ~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~-l-~iV~~SS~ag~~g~~g~~~YaAaka~~~a 686 (795)
T 3slk_A 610 HPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PD-V-ALVLFSSVSGVLGSGGQGNYAAANSFLDA 686 (795)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TT-S-EEEEEEETHHHHTCSSCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hC-C-EEEEEccHHhcCCCCCCHHHHHHHHHHHH
Confidence 599999999854321 1 3467889999999999883 23 5 899999975432 233789999988777
Q ss_pred HHHh---hCCCeEEEecCeeecCCChhHHHH----HHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 145 AVLR---ELPWATIMRPAAMIGTEDRLLNKW----AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 145 ~~~~---~~~~~~i~r~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+.++ .++++..+.||.+-..+ +...+ .....+.+ ...+..++....+..++..+..
T Consensus 687 lA~~~~~~Gi~v~sI~pG~v~t~g--~~~~~~~~~~~~~~~~g-----------~~~l~~~e~~~~~~~~l~~~~~ 749 (795)
T 3slk_A 687 LAQQRQSRGLPTRSLAWGPWAEHG--MASTLREAEQDRLARSG-----------LLPISTEEGLSQFDAACGGAHT 749 (795)
T ss_dssp HHHHHHHTTCCEEEEEECCCSCCC--HHHHHHHHHHHHHHHTT-----------BCCCCHHHHHHHHHHHHTSSCS
T ss_pred HHHHHHHcCCeEEEEECCeECcch--hhccccHHHHHHHHhcC-----------CCCCCHHHHHHHHHHHHhCCCc
Confidence 6654 46999999999886432 21111 11111111 2346668888888888876654
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.24 E-value=3.8e-11 Score=104.75 Aligned_cols=114 Identities=10% Similarity=0.063 Sum_probs=83.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhh--hcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRH--LKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~--~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
.++|||+|+||+|++|++++..|+++| ++|++++++++ .... +.... .... +.+ +.+.+++.++++++|+|
T Consensus 6 ~~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~--~~~~-v~~-~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 6 APGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMD--TGAV-VRG-FLGQQQLEAALTGMDLI 80 (326)
T ss_dssp --CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSC--SSCE-EEE-EESHHHHHHHHTTCSEE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhccc--ccce-EEE-EeCCCCHHHHcCCCCEE
Confidence 446899999999999999999999988 89999987764 1111 11111 0111 121 22356788899999999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
||+++.... ....++...|+.++.++++++++.+ .+.+|+++|
T Consensus 81 i~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S 125 (326)
T 1smk_A 81 IVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS 125 (326)
T ss_dssp EECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred EEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence 999997543 2346788999999999999999998 777888876
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.13 E-value=2.9e-11 Score=105.74 Aligned_cols=157 Identities=8% Similarity=-0.001 Sum_probs=101.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-------EEEEeeCC----CCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-------QVLVPFRG----CEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-------~V~~~~R~----~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~ 74 (327)
++|||+||||+||+|++++..|+..|. +|++++++ .++.......+... ...+ ..|+...+++.+++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~-~~~~-~~~i~~~~~~~~al 81 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC-AFPL-LAGMTAHADPMTAF 81 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT-TCTT-EEEEEEESSHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh-cccc-cCcEEEecCcHHHh
Confidence 357999999999999999999998885 89998877 22111111111100 0111 23554456678889
Q ss_pred ccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHc-CCcceEEEEeccC---------CCCCCC--chHHHhHH
Q 047628 75 AKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISCLG---------ASSSSP--SRVFSTKA 140 (327)
Q Consensus 75 ~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss~~---------v~~~~~--~~y~~~K~ 140 (327)
+++|+|||+|+.... ....++...|+..+.++++++++. ++-.+||++|... ..+.-| ..++.++.
T Consensus 82 ~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~L 161 (329)
T 1b8p_A 82 KDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRL 161 (329)
T ss_dssp TTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHH
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeecH
Confidence 999999999997543 234567889999999999999998 3334888888621 111111 23555555
Q ss_pred HHHHHH----HhhCCCeEEEecCeeecC
Q 047628 141 AAEEAV----LRELPWATIMRPAAMIGT 164 (327)
Q Consensus 141 ~~E~~~----~~~~~~~~i~r~~~~~G~ 164 (327)
...++. +..+++..-++...++|.
T Consensus 162 d~~r~~~~la~~lgv~~~~v~~~~v~G~ 189 (329)
T 1b8p_A 162 DHNRALSQIAAKTGKPVSSIEKLFVWGN 189 (329)
T ss_dssp HHHHHHHHHHHHHTCCGGGEESCEEEBC
T ss_pred HHHHHHHHHHHHhCcCHHHceEEEEEec
Confidence 443333 334666666676667774
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=2.1e-09 Score=115.54 Aligned_cols=155 Identities=13% Similarity=0.047 Sum_probs=111.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCCCCch---hhhccc-CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGCEDDP---RHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~---~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
.++++||||+|-||..+++.|+++|.+ |++++|+..+.. .....+ ....++..+.+|+++.+++.++++
T Consensus 1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g 1963 (2512)
T 2vz8_A 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLG 1963 (2512)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 578999999999999999999999986 888889876542 112111 112468889999999998887664
Q ss_pred cccEEEEcccccccc--------CcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCC--CCchHHHhHHHHHH
Q 047628 76 KANVVINLIGREYET--------RNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSS--SPSRVFSTKAAAEE 144 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~--------~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~E~ 144 (327)
.+|+|||+||..... .-...+++|+.++.++.+++...- ...+||.+||...... ....|+.+|...+.
T Consensus 1964 ~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~ 2043 (2512)
T 2vz8_A 1964 PVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAMER 2043 (2512)
T ss_dssp CEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHHH
T ss_pred CCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHHH
Confidence 379999999974321 113467889999999988877642 1468999999654322 33789999999998
Q ss_pred HHH---hhCCCeEEEecCee
Q 047628 145 AVL---RELPWATIMRPAAM 161 (327)
Q Consensus 145 ~~~---~~~~~~~i~r~~~~ 161 (327)
+.+ ..|++...+..+.+
T Consensus 2044 l~~~rr~~Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A 2044 ICEKRRHDGLPGLAVQWGAI 2063 (2512)
T ss_dssp HHHHHHHTTSCCCEEEECCB
T ss_pred HHHHHHHCCCcEEEEEccCc
Confidence 887 34577666666554
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.96 E-value=1.8e-10 Score=99.43 Aligned_cols=109 Identities=15% Similarity=0.049 Sum_probs=76.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeC--CCCCchh---hhccc-CCCCCeeEEeeCCCChhHHHHHhccccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFR--GCEDDPR---HLKLM-GDLGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R--~~~~~~~---~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
|||+||||+|++|++++..|+..|. ++.++++ +.++... .+... ....++++.. + + .++++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCCCE
Confidence 6899999999999999999998875 6888877 4322111 01100 0001223222 2 2 446889999
Q ss_pred EEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 80 VINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 80 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|||+++.... ....++...|+.+++++++++++.+ .+.+|+++|
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~S 119 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTS 119 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECC
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeC
Confidence 9999997543 2335678999999999999999998 778888876
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=1.3e-10 Score=100.94 Aligned_cols=111 Identities=14% Similarity=0.037 Sum_probs=76.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeC--CCCCchh---hhcccCCC--CCeeEEeeCCCChhHHHHHhcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFR--GCEDDPR---HLKLMGDL--GQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R--~~~~~~~---~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
|||+||||+|++|++++..|+..|. ++.++++ +.++... .+...... .++.+... .+++.++++++|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~----~d~l~~al~gaD 76 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVE----SDENLRIIDESD 76 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEE----ETTCGGGGTTCS
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeC----CcchHHHhCCCC
Confidence 5899999999999999999998874 6888877 3321110 01110000 11222211 123667789999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+|||+|+.... ....++...|+.+++++++++++.+ +.+++++|
T Consensus 77 ~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~S 122 (313)
T 1hye_A 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC--DTKIFVIT 122 (313)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC--CCEEEECS
T ss_pred EEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEec
Confidence 99999997543 2335688999999999999999987 56666666
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.95 E-value=1.9e-09 Score=97.99 Aligned_cols=114 Identities=23% Similarity=0.299 Sum_probs=80.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
++++|+|+| +|++|+++++.|++.|++|++++|+.++........ +++..+.+|+.+.+++.++++++|+||||++
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~---~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~ 77 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---QHSTPISLDVNDDAALDAEVAKHDLVISLIP 77 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC---TTEEEEECCTTCHHHHHHHHTTSSEEEECCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHcCCcEEEECCc
Confidence 457899998 799999999999999999999999865432221111 2477889999999999999999999999998
Q ss_pred cccccC-cchhHh--h-------hhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 86 REYETR-NYSFED--V-------NHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 86 ~~~~~~-~~~~~~--~-------n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
...... .....+ . ....+.+++++|+++| +. ++++.+.
T Consensus 78 ~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG-v~---~i~g~g~ 125 (450)
T 1ff9_A 78 YTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG-IT---VMNEIGL 125 (450)
T ss_dssp --CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT-CE---EECSCBB
T ss_pred cccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC-Ce---EEeCCCC
Confidence 632110 001111 1 1246788999999998 63 4555554
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=5.1e-09 Score=79.85 Aligned_cols=100 Identities=20% Similarity=0.171 Sum_probs=72.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLI 84 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a 84 (327)
++++|+|+|+ |.+|+.+++.|.+.|++|++++|+++... .+.. .....+.+|..+++.+.++ +.++|+||+++
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~-~~~~----~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~ 78 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVN-AYAS----YATHAVIANATEENELLSLGIRNFEYVIVAI 78 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHH-TTTT----TCSEEEECCTTCHHHHHTTTGGGCSEEEECC
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH----hCCEEEEeCCCCHHHHHhcCCCCCCEEEECC
Confidence 3467999998 99999999999999999999998754322 1211 1346678999998888776 77899999998
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+... + ....+.+.+++.+ +++++..++
T Consensus 79 ~~~~--------~----~~~~~~~~~~~~~-~~~ii~~~~ 105 (144)
T 2hmt_A 79 GANI--------Q----ASTLTTLLLKELD-IPNIWVKAQ 105 (144)
T ss_dssp CSCH--------H----HHHHHHHHHHHTT-CSEEEEECC
T ss_pred CCch--------H----HHHHHHHHHHHcC-CCeEEEEeC
Confidence 7421 1 1234667778888 676665553
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.91 E-value=6.8e-10 Score=95.32 Aligned_cols=83 Identities=18% Similarity=0.121 Sum_probs=65.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
++.++++||||+|.+|+++++.|++.|++|++++|+.++............++.++.+|+++++++.++++++|+|||++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a 196 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 196 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence 45689999999999999999999999999999999865433222211100136778899999999999999999999999
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+..
T Consensus 197 g~g 199 (287)
T 1lu9_A 197 AIG 199 (287)
T ss_dssp CTT
T ss_pred Ccc
Confidence 753
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=3.2e-08 Score=106.66 Aligned_cols=223 Identities=13% Similarity=-0.004 Sum_probs=134.8
Q ss_pred cCCcEEEEEcCCCc-cHHHHHHHHHhCCCEEEEeeCCCCC-----chhhhcccCC-CCCeeEEeeCCCChhHHHHHh---
Q 047628 5 YSGIIATVFGTTGF-LGRYVVQQLAKMGSQVLVPFRGCED-----DPRHLKLMGD-LGQIVPMKFNPRDDNTIKATM--- 74 (327)
Q Consensus 5 ~~~~~ilI~GatG~-iG~~l~~~Ll~~g~~V~~~~R~~~~-----~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~--- 74 (327)
+..+.++||||++- ||.++++.|++.|.+|++.+|+.+. .......... ..++..+.+|+++++++.+++
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 45689999999999 9999999999999999999998765 2222222211 135788899999999887664
Q ss_pred -c-------cccEEEEcccc----ccc-----c-Ccc-------hhHhhhhHHHHHHHHHHHH----cC--CcceEEEEe
Q 047628 75 -A-------KANVVINLIGR----EYE-----T-RNY-------SFEDVNHFMAERIAGIAKE----HG--GIMRFIQIS 123 (327)
Q Consensus 75 -~-------~~d~vi~~a~~----~~~-----~-~~~-------~~~~~n~~~~~~l~~a~~~----~~--~v~~~v~~S 123 (327)
+ .+|++||+||. ... . ... ..+++|+.++..++.++.. .+ ....++..+
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ 2293 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPG 2293 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEE
T ss_pred HhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEEC
Confidence 2 36999999997 111 0 111 1267788887777776543 22 011223222
Q ss_pred c-cCCCCCCCchHHHhHHHHHHHHHhhC--------CCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceec
Q 047628 124 C-LGASSSSPSRVFSTKAAAEEAVLREL--------PWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQ 193 (327)
Q Consensus 124 s-~~v~~~~~~~y~~~K~~~E~~~~~~~--------~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (327)
+ ..........|+.+|.+++.+.+... +.+..+.||++-+..- ............ .+ ..
T Consensus 2294 ss~~g~~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~---~~--------~r 2362 (3089)
T 3zen_D 2294 SPNRGMFGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAVEE---AG--------VT 2362 (3089)
T ss_dssp CSSTTSCSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHHGG---GS--------CB
T ss_pred CcccccCCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHHHh---cC--------CC
Confidence 2 21111123579999999888765432 5677888888864321 000000111111 11 11
Q ss_pred ceeHHHHHHHHHHHhhcCCC--CCCc--eEEecCCc---cccHHHHHHHHHH
Q 047628 194 PVYVVDVAAAVTAALKDDGT--SMGK--IYELGGPD---IFTVHELAELMYD 238 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~~~--~~~~--~~~v~~~~---~~s~~el~~~i~~ 238 (327)
....+|+|.+++.++..... ..++ ...++|+- ..++.|+...+.+
T Consensus 2363 ~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2363 TYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp CEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred CCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 23789999999998864321 0122 23344543 3678888876544
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.87 E-value=1.1e-08 Score=77.52 Aligned_cols=98 Identities=18% Similarity=0.211 Sum_probs=70.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
.|+|+|+|+ |++|+.+++.|.+.|++|++++|+++... .+... .++..+.+|..+++.+.+. ++++|+||++.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~-~~~~~---~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK-KASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH-HHHHh---cCcEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence 478999998 99999999999999999999999765422 22211 1366778999888888765 678999999975
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
.. ..| ..+.+.++..+ ..++|..+
T Consensus 79 ~~---------~~~----~~~~~~~~~~~-~~~ii~~~ 102 (140)
T 1lss_A 79 KE---------EVN----LMSSLLAKSYG-INKTIARI 102 (140)
T ss_dssp CH---------HHH----HHHHHHHHHTT-CCCEEEEC
T ss_pred Cc---------hHH----HHHHHHHHHcC-CCEEEEEe
Confidence 31 112 24566777777 66776543
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.85 E-value=1.1e-08 Score=77.85 Aligned_cols=97 Identities=15% Similarity=0.097 Sum_probs=72.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
+++|+|+|+ |.+|+++++.|.+.|++|++++++++.... +.. ..+.++.+|.++++.+.++ ++++|+||.+.+
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~-~~~----~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIEL-LED----EGFDAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHH----TTCEEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH-HHH----CCCcEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 468999998 999999999999999999999998655322 222 2478889999999998876 467999998876
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
.. .....++..+++.+ ..+++-..
T Consensus 80 ~~-------------~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 80 DD-------------EFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp CH-------------HHHHHHHHHHHHHC-CCCEEEEE
T ss_pred CH-------------HHHHHHHHHHHHhC-CceEEEEE
Confidence 21 12234566677776 55665433
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.85 E-value=7e-09 Score=93.21 Aligned_cols=101 Identities=14% Similarity=0.155 Sum_probs=75.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCchhhhcccCC--CCCeeEEeeCCCChhHHHHHhcc--ccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGD--LGQIVPMKFNPRDDNTIKATMAK--ANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~--~d~ 79 (327)
|++|+|+|| |++|+.+++.|++.| .+|.+.+|+.++.......... ..++..+.+|+++.+++.+++++ +|+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 368999999 999999999999988 3899999987664333222211 12578899999999999999988 899
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|||++++.. ...++++|.+.| + +++-+|+
T Consensus 80 Vin~ag~~~--------------~~~v~~a~l~~g-~-~vvD~a~ 108 (405)
T 4ina_A 80 VLNIALPYQ--------------DLTIMEACLRTG-V-PYLDTAN 108 (405)
T ss_dssp EEECSCGGG--------------HHHHHHHHHHHT-C-CEEESSC
T ss_pred EEECCCccc--------------ChHHHHHHHHhC-C-CEEEecC
Confidence 999997531 146788888888 4 4443433
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.84 E-value=7.2e-09 Score=92.01 Aligned_cols=94 Identities=16% Similarity=0.210 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.+|||+|+|| |++|+.+++.|.+ .++|.+.+|+.++.... . +.+..+..|+.|.+++.++++++|+||++++
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~-~-----~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p 86 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKV-K-----EFATPLKVDASNFDKLVEVMKEFELVIGALP 86 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-T-----TTSEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH-h-----ccCCcEEEecCCHHHHHHHHhCCCEEEEecC
Confidence 3689999999 9999999988754 58999999876543221 1 2467789999999999999999999999987
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+.. ...++++|.++| .+++=+|
T Consensus 87 ~~~--------------~~~v~~~~~~~g--~~yvD~s 108 (365)
T 3abi_A 87 GFL--------------GFKSIKAAIKSK--VDMVDVS 108 (365)
T ss_dssp GGG--------------HHHHHHHHHHHT--CEEEECC
T ss_pred Ccc--------------cchHHHHHHhcC--cceEeee
Confidence 531 146889999998 4666554
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.81 E-value=5.1e-08 Score=75.50 Aligned_cols=103 Identities=18% Similarity=0.124 Sum_probs=72.3
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEE
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVV 80 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~v 80 (327)
+-....++|+|+|+ |.+|+.+++.|.+.|++|++++|+++.... +.. ..+...+.+|..+++.+.++ +.++|+|
T Consensus 14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~-~~~---~~g~~~~~~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR-LNS---EFSGFTVVGDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG-SCT---TCCSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHh---cCCCcEEEecCCCHHHHHHcCcccCCEE
Confidence 33455689999997 999999999999999999999998765322 220 12356778898888887765 7789999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHH-cCCcceEEEEe
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKE-HGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~v~~~v~~S 123 (327)
|.+.+.. .....+.+.++. .+ ..+++...
T Consensus 89 i~~~~~~-------------~~~~~~~~~~~~~~~-~~~iv~~~ 118 (155)
T 2g1u_A 89 FAFTNDD-------------STNFFISMNARYMFN-VENVIARV 118 (155)
T ss_dssp EECSSCH-------------HHHHHHHHHHHHTSC-CSEEEEEC
T ss_pred EEEeCCc-------------HHHHHHHHHHHHHCC-CCeEEEEE
Confidence 9997642 122345666776 45 55555544
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.72 E-value=7.1e-08 Score=74.50 Aligned_cols=102 Identities=18% Similarity=0.133 Sum_probs=71.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~ 83 (327)
|..++|+|+|+ |.+|+.+++.|.+.|++|++++|+++.....+.... ..++.++.+|.++++.+.++ ++++|+||-+
T Consensus 1 ~~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~-~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 1 HRKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CCCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh-cCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 34578999997 999999999999999999999997532111121110 02488999999999999887 8899999988
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEE
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~ 121 (327)
.+.. +.| ..+...+++..+..+++.
T Consensus 79 ~~~d---------~~n----~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 79 SDND---------ADN----AFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp SSCH---------HHH----HHHHHHHHHHTSSSCEEE
T ss_pred cCCh---------HHH----HHHHHHHHHHCCCCEEEE
Confidence 7531 112 345566666532445553
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.67 E-value=1e-07 Score=75.87 Aligned_cols=97 Identities=9% Similarity=-0.021 Sum_probs=71.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH--hccccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT--MAKANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~--~~~~d~vi 81 (327)
+..++|+|+|+ |.+|..+++.|.+. |++|++++|++++... +... ++..+.+|.++++.+.++ ++++|+||
T Consensus 37 ~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~-~~~~----g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 37 PGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQ-HRSE----GRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp CTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHH-HHHT----TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHH-HHHC----CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 33578999996 99999999999999 9999999998755322 2222 467788999999888877 78899999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEE
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v 120 (327)
.+.+.. .....++..++..++..+++
T Consensus 111 ~~~~~~-------------~~~~~~~~~~~~~~~~~~ii 136 (183)
T 3c85_A 111 LAMPHH-------------QGNQTALEQLQRRNYKGQIA 136 (183)
T ss_dssp ECCSSH-------------HHHHHHHHHHHHTTCCSEEE
T ss_pred EeCCCh-------------HHHHHHHHHHHHHCCCCEEE
Confidence 887531 22244566777766333444
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.66 E-value=6.5e-08 Score=88.16 Aligned_cols=115 Identities=19% Similarity=0.254 Sum_probs=81.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++++|+|+|+ |++|+.+++.|++. |++|++++|+.++....... .++..+.+|+.+.+++.++++++|+||||
T Consensus 21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~----~~~~~~~~D~~d~~~l~~~l~~~DvVIn~ 95 (467)
T 2axq_A 21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP----SGSKAISLDVTDDSALDKVLADNDVVISL 95 (467)
T ss_dssp --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG----GTCEEEECCTTCHHHHHHHHHTSSEEEEC
T ss_pred CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh----cCCcEEEEecCCHHHHHHHHcCCCEEEEC
Confidence 45679999998 99999999999998 78999999986653322221 13667789999999999999999999999
Q ss_pred cccccccC-c-------chhHhhh--hHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 84 IGREYETR-N-------YSFEDVN--HFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 84 a~~~~~~~-~-------~~~~~~n--~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
++...... . ..+++.+ ...+..++++|+++| + .++++.+..
T Consensus 96 tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aG-v---~~i~g~G~~ 146 (467)
T 2axq_A 96 IPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAG-I---TVMNEIGLD 146 (467)
T ss_dssp SCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHT-C---EEECSCBBT
T ss_pred CchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcC-C---EEEecCCcC
Confidence 98642110 0 1111122 134577888888888 5 245665554
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=1.1e-07 Score=82.37 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=77.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCC--C-CeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDL--G-QIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~--~-~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|||.|+||+|++|+.++..|+..| .+|+++++++ .......+... + +++... ..+++.++++++|+||+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~~aDvVvi 74 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLKGCDVVVI 74 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHTTCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhCCCCEEEE
Confidence 589999999999999999999888 7999999986 11111111110 0 111110 12457778999999999
Q ss_pred ccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 83 LIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 83 ~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
++|.... ....+....|...+..+++.+.+.++-.+++++|
T Consensus 75 ~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s 117 (314)
T 1mld_A 75 PAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (314)
T ss_dssp CCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence 9987543 2345677889999999999999887323666654
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.59 E-value=8.7e-07 Score=77.55 Aligned_cols=143 Identities=13% Similarity=0.024 Sum_probs=95.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHH-hCCCEEEEeeCCCCCchh---------------hhcccCCCCCeeEEeeCCCChhH
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLA-KMGSQVLVPFRGCEDDPR---------------HLKLMGDLGQIVPMKFNPRDDNT 69 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll-~~g~~V~~~~R~~~~~~~---------------~~~~~~~~~~v~~~~~Dl~~~~~ 69 (327)
..+++|||||+.-+|.+.+..|. ..|..+.++.|..+.... ..+..+ .+...+.||+.+++.
T Consensus 49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G--~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG--LYSVTIDGDAFSDEI 126 (401)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT--CCEEEEESCTTSHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC--CCceeEeCCCCCHHH
Confidence 35899999999999999999887 678999999887654322 112223 467899999999988
Q ss_pred HHHHhc-------cccEEEEccccccccCcc----------------------------------hhHhhhhHHHHH---
Q 047628 70 IKATMA-------KANVVINLIGREYETRNY----------------------------------SFEDVNHFMAER--- 105 (327)
Q Consensus 70 ~~~~~~-------~~d~vi~~a~~~~~~~~~----------------------------------~~~~~n~~~~~~--- 105 (327)
+.++++ ++|++||.++......+. ..-+.+++.|..
T Consensus 127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg 206 (401)
T 4ggo_A 127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG 206 (401)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence 877764 479999999865321110 000112233332
Q ss_pred ------HHHHHHHcCC---cceEEEEeccCCCCCCC----chHHHhHHHHHHHHHhhC
Q 047628 106 ------IAGIAKEHGG---IMRFIQISCLGASSSSP----SRVFSTKAAAEEAVLREL 150 (327)
Q Consensus 106 ------l~~a~~~~~~---v~~~v~~Ss~~v~~~~~----~~y~~~K~~~E~~~~~~~ 150 (327)
.+.+....+- -.+++-.|+++..-..| ..+|.+|.+.|...+...
T Consensus 207 ~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La 264 (401)
T 4ggo_A 207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLN 264 (401)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHH
Confidence 3344444330 13688888877654455 357999999999988763
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.52 E-value=5.8e-08 Score=84.47 Aligned_cols=112 Identities=9% Similarity=-0.017 Sum_probs=77.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC--E-----EEEeeCCCC--Cch---hhhcccCCCCCeeEEeeCCCChhHHHHHh
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS--Q-----VLVPFRGCE--DDP---RHLKLMGDLGQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~--~-----V~~~~R~~~--~~~---~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~ 74 (327)
.+||+||||+|+||++++..|+..|. + ++++++.+. ... ..+... ..+-+. ++...+...+.+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~-~~~~~~----~~~~~~~~~~~~ 77 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC-ALPLLK----DVIATDKEEIAF 77 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT-CCTTEE----EEEEESCHHHHT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhh-hhcccC----CEEEcCCcHHHh
Confidence 47999999999999999999988764 4 888888642 111 111110 011111 222223456678
Q ss_pred ccccEEEEcccccc--ccCcchhHhhhhHHHHHHHHHHHHcCCcc--eEEEEec
Q 047628 75 AKANVVINLIGREY--ETRNYSFEDVNHFMAERIAGIAKEHGGIM--RFIQISC 124 (327)
Q Consensus 75 ~~~d~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~v~--~~v~~Ss 124 (327)
+++|+||++||... ..+..+.++.|...++++++++++.+ .+ +++.+|.
T Consensus 78 ~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~-~~~~~vivvsN 130 (333)
T 5mdh_A 78 KDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYA-KKSVKVIVVGN 130 (333)
T ss_dssp TTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHS-CTTCEEEECSS
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEcCC
Confidence 99999999998753 23456788999999999999999998 44 4666664
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.51 E-value=3e-07 Score=75.36 Aligned_cols=74 Identities=14% Similarity=0.142 Sum_probs=60.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~ 86 (327)
|+|+|+|+ |.+|+++++.|.+.|++|++++++++........ .++.++.+|.++++.+.++ ++++|+||-+.+.
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK----LKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH----SSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----cCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 57999997 9999999999999999999999987653321111 1478899999999999886 7889999977653
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.46 E-value=1.1e-06 Score=66.58 Aligned_cols=74 Identities=15% Similarity=0.104 Sum_probs=60.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
+++|+|+|+ |.+|+.+++.|.+.|++|++++++++.... +.. .++..+.+|.++++.+.++ ++++|+||-+.+
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~-~~~----~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDE-LRE----RGVRAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHH----TTCEEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH-HHH----cCCCEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 468999998 999999999999999999999998765322 222 2478899999999988875 578999998875
Q ss_pred c
Q 047628 86 R 86 (327)
Q Consensus 86 ~ 86 (327)
.
T Consensus 81 ~ 81 (140)
T 3fwz_A 81 N 81 (140)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.42 E-value=8.4e-07 Score=72.44 Aligned_cols=74 Identities=15% Similarity=0.188 Sum_probs=54.1
Q ss_pred CcEEEEEcC----------------CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHH
Q 047628 7 GIIATVFGT----------------TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70 (327)
Q Consensus 7 ~~~ilI~Ga----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~ 70 (327)
.++|||||| ||.+|.+++++|+++|++|+++.|+.+.... .. ..+..+ |+.+.+++
T Consensus 3 gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~-~~-----~~~~~~--~v~s~~em 74 (232)
T 2gk4_A 3 AMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE-PH-----PNLSIR--EITNTKDL 74 (232)
T ss_dssp CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC-CC-----TTEEEE--ECCSHHHH
T ss_pred CCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc-CC-----CCeEEE--EHhHHHHH
Confidence 589999999 9999999999999999999999997643210 00 134444 44454444
Q ss_pred ----HHHhccccEEEEcccccc
Q 047628 71 ----KATMAKANVVINLIGREY 88 (327)
Q Consensus 71 ----~~~~~~~d~vi~~a~~~~ 88 (327)
.+.+.++|++||+|+...
T Consensus 75 ~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 75 LIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HHHHHHHGGGCSEEEECSBCCS
T ss_pred HHHHHHhcCCCCEEEEcCcccc
Confidence 344567999999999743
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.9e-07 Score=81.44 Aligned_cols=112 Identities=15% Similarity=0.082 Sum_probs=75.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhccccE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
|+++||.|+|++|++|+.++..|+..| .+|++++++.++.... +... ..+.. ++.-..+..++++++|+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~~~~~-----~i~~t~d~~~al~dADv 79 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-GFEGL-----NLTFTSDIKEALTDAKY 79 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-CCTTC-----CCEEESCHHHHHTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-cCCCC-----ceEEcCCHHHHhCCCCE
Confidence 557899999999999999999999988 5899999865432211 1110 01111 11112345667899999
Q ss_pred EEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcce--EEEEe
Q 047628 80 VINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMR--FIQIS 123 (327)
Q Consensus 80 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~--~v~~S 123 (327)
||.++|.... ....+....|....+.+++.+.+.+ .+- ++.+|
T Consensus 80 VvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvs 126 (343)
T 3fi9_A 80 IVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIF 126 (343)
T ss_dssp EEECCC-------CHHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECS
T ss_pred EEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEec
Confidence 9999987532 2345678899999999999999887 343 45554
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.29 E-value=3.3e-06 Score=68.81 Aligned_cols=73 Identities=11% Similarity=0.111 Sum_probs=55.4
Q ss_pred cCCcEEEEEcC----------------CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh
Q 047628 5 YSGIIATVFGT----------------TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN 68 (327)
Q Consensus 5 ~~~~~ilI~Ga----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~ 68 (327)
+..++|||||| ||.+|.+++++|+++|++|+++.|+..-.. . ..+. .+|+.+.+
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~~---~-----~g~~--~~dv~~~~ 75 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT---P-----PFVK--RVDVMTAL 75 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC---C-----TTEE--EEECCSHH
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccccc---C-----CCCe--EEccCcHH
Confidence 56789999999 799999999999999999999988653211 0 1233 46777766
Q ss_pred HHHHH----hccccEEEEccccc
Q 047628 69 TIKAT----MAKANVVINLIGRE 87 (327)
Q Consensus 69 ~~~~~----~~~~d~vi~~a~~~ 87 (327)
++.+. +.++|++||+||..
T Consensus 76 ~~~~~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 76 EMEAAVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHHHHHHGGGCSEEEECCBCC
T ss_pred HHHHHHHHhcCCCCEEEECCccc
Confidence 55443 45689999999974
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.24 E-value=2e-06 Score=71.20 Aligned_cols=92 Identities=10% Similarity=-0.025 Sum_probs=68.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
.++|+|+|+ |.+|+.+++.|.+.|+ |++++|+++.... +. .++.++.+|.++++.+.++ ++++|.||.+.+
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~-~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKV-LR-----SGANFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHH-HH-----TTCEEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHH-Hh-----cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 578999998 9999999999999999 9999888654322 22 2488999999999999887 789999998764
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcc-eEE
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFI 120 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v 120 (327)
.. .....++..+++.+ .+ ++|
T Consensus 81 ~d-------------~~n~~~~~~a~~~~-~~~~ii 102 (234)
T 2aef_A 81 SD-------------SETIHCILGIRKID-ESVRII 102 (234)
T ss_dssp CH-------------HHHHHHHHHHHHHC-SSSEEE
T ss_pred Cc-------------HHHHHHHHHHHHHC-CCCeEE
Confidence 31 12234566677776 44 444
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=1.2e-05 Score=72.04 Aligned_cols=89 Identities=20% Similarity=0.230 Sum_probs=70.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
.++|+|+|. |.+|+.+++.|.+.|++|++++++++... .+... ++.++.+|.++++.|.++ ++++|+||-+.+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~-~~~~~----g~~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIE-TLRKF----GMKVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHH-HHHHT----TCCCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHHhC----CCeEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 468999998 99999999999999999999999876532 22222 478899999999999887 788999998875
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
.. .....++..+++.+
T Consensus 78 ~~-------------~~n~~i~~~ar~~~ 93 (413)
T 3l9w_A 78 DP-------------QTNLQLTEMVKEHF 93 (413)
T ss_dssp SH-------------HHHHHHHHHHHHHC
T ss_pred Ch-------------HHHHHHHHHHHHhC
Confidence 31 23345677777776
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.17 E-value=1.2e-06 Score=74.14 Aligned_cols=100 Identities=16% Similarity=0.157 Sum_probs=59.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHh-CCCEEEEee-CCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAK-MGSQVLVPF-RGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~-R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
.+++|+|+|+|++|++|+.+++.+.+ .|+++.++. |+++.. ........ .+. ..++...+++.++++++|+|
T Consensus 2 ~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~---g~~--~~~v~~~~dl~~~l~~~DvV 76 (273)
T 1dih_A 2 HDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELA---GAG--KTGVTVQSSLDAVKDDFDVF 76 (273)
T ss_dssp CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSS---SSS--CCSCCEESCSTTTTTSCSEE
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHc---CCC--cCCceecCCHHHHhcCCCEE
Confidence 34568999999999999999999875 478887554 443221 01111000 000 01111112233455689999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
|+++.+ ..+..++++|.++| + ++| ++|.
T Consensus 77 IDft~p--------------~~~~~~~~~a~~~G-~-~vV-igTt 104 (273)
T 1dih_A 77 IDFTRP--------------EGTLNHLAFCRQHG-K-GMV-IGTT 104 (273)
T ss_dssp EECSCH--------------HHHHHHHHHHHHTT-C-EEE-ECCC
T ss_pred EEcCCh--------------HHHHHHHHHHHhCC-C-CEE-EECC
Confidence 998853 24567888999998 5 544 4443
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=98.17 E-value=1.9e-06 Score=75.41 Aligned_cols=99 Identities=10% Similarity=0.036 Sum_probs=61.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-----C-EEEEeeCCCC--Cchhh-hcccCCCCCeeEEeeCCCChhHHHHHhc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-----S-QVLVPFRGCE--DDPRH-LKLMGDLGQIVPMKFNPRDDNTIKATMA 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-----~-~V~~~~R~~~--~~~~~-~~~~~~~~~v~~~~~Dl~~~~~~~~~~~ 75 (327)
|+||+|+|+||||++|+.|++.|++++ + +++++.+..+ +.... ...+....++.+ .|+ +++ .+.
T Consensus 7 M~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~~~~~~~~--~~~-~~~----~~~ 79 (352)
T 2nqt_A 7 ANATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLTPLAHRVV--EPT-EAA----VLG 79 (352)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCGGGTTCBC--EEC-CHH----HHT
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhcccccccceeee--ccC-CHH----Hhc
Confidence 445799999999999999999999887 3 7888764332 21111 111100001222 222 233 245
Q ss_pred cccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 76 KANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
++|+||.|++... +..+++.+ +.| + ++|-.|+..-
T Consensus 80 ~~DvVf~alg~~~--------------s~~~~~~~-~~G-~-~vIDlSa~~R 114 (352)
T 2nqt_A 80 GHDAVFLALPHGH--------------SAVLAQQL-SPE-T-LIIDCGADFR 114 (352)
T ss_dssp TCSEEEECCTTSC--------------CHHHHHHS-CTT-S-EEEECSSTTT
T ss_pred CCCEEEECCCCcc--------------hHHHHHHH-hCC-C-EEEEECCCcc
Confidence 8999999987532 24577777 777 4 7888888654
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=4.6e-06 Score=72.26 Aligned_cols=110 Identities=15% Similarity=0.081 Sum_probs=74.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhh---hcccCCC--CCeeEEeeCCCChhHHHHHhcccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRH---LKLMGDL--GQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~---~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
..|||.|+|+ |.+|+.++..|+..|. +|++++++.++.... +...... .++.....| .++++++|
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~~aD 75 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCKDAD 75 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhCCCC
Confidence 3579999997 9999999999999886 899999875442211 1110000 123433332 24678999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+||.++|.... ....+....|......+++.+.+.++-..++.+|
T Consensus 76 vVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt 122 (326)
T 3pqe_A 76 IVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVAT 122 (326)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence 99999987533 2335677889999999999999887322444444
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=98.13 E-value=6.9e-06 Score=71.15 Aligned_cols=115 Identities=15% Similarity=0.132 Sum_probs=70.5
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCC----CCeeEEeeCCCChhHHHHHh
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDL----GQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~ 74 (327)
|.|..++|||.|+|+ |.+|..++..|+..|. +|++++.+.++.......+... .++++. . .+ .+++
T Consensus 1 ~~m~~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~----~~a~ 72 (318)
T 1y6j_A 1 MEMVKSRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GD----YSDV 72 (318)
T ss_dssp ------CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGG
T ss_pred CCCCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CC----HHHh
Confidence 444334579999998 9999999999999886 9999999876543222211110 122222 1 12 3458
Q ss_pred ccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 75 AKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 75 ~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+++|+||.+++.... ....+....|......+++.+.+.+ ..-++...|
T Consensus 73 ~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~t 123 (318)
T 1y6j_A 73 KDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVVS 123 (318)
T ss_dssp TTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEECS
T ss_pred CCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhC-CCcEEEEec
Confidence 899999999987542 2234566788888899999998876 344444443
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.10 E-value=1.2e-05 Score=67.61 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=62.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CCEEEE-eeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GSQVLV-PFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~-~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
|+|+||+|+|++|.+|+.+++.+.+. +.++.+ ++|+.+... ....... .+.. ++.-.+++.+++.++|+||
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~---g~~~---gv~v~~dl~~ll~~~DVVI 78 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFL---GKQT---GVALTDDIERVCAEADYLI 78 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTT---TCCC---SCBCBCCHHHHHHHCSEEE
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHh---CCCC---CceecCCHHHHhcCCCEEE
Confidence 56789999999999999999999875 677776 466543211 1111110 0100 2212234555667899999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++.+ ..+...++.|.++| + ++| ++|.+
T Consensus 79 DfT~p--------------~a~~~~~~~al~~G-~-~vV-igTTG 106 (272)
T 4f3y_A 79 DFTLP--------------EGTLVHLDAALRHD-V-KLV-IGTTG 106 (272)
T ss_dssp ECSCH--------------HHHHHHHHHHHHHT-C-EEE-ECCCC
T ss_pred EcCCH--------------HHHHHHHHHHHHcC-C-CEE-EECCC
Confidence 99743 34566788888888 5 555 45544
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=2.2e-06 Score=73.98 Aligned_cols=110 Identities=13% Similarity=0.042 Sum_probs=71.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCC-----CCeeEEeeCCCChhHHHHHhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDL-----GQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
+|||.|+|+ |.+|..++..|+..|+ +|+++++++++.......+... ...++... ++ . ++++++|+|
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d---~-~a~~~aD~V 74 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NN---Y-ADTANSDVI 74 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SC---G-GGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CC---H-HHHCCCCEE
Confidence 479999999 9999999999999996 8999988765432211111100 11222111 12 2 457899999
Q ss_pred EEcccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 81 INLIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 81 i~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|.+++..... ...+....|......+.+.+.+.+ .+.++...|
T Consensus 75 i~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t 119 (309)
T 1ur5_A 75 VVTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMVN 119 (309)
T ss_dssp EECCCC--------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECC
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcC
Confidence 9999875432 234566778888889999998887 555555544
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=98.09 E-value=3.7e-06 Score=73.96 Aligned_cols=100 Identities=14% Similarity=0.131 Sum_probs=60.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|++++|+|.||||++|+.+++.|.+++ .+++++.+..+.. ..+... +.+.... ..|+.-.+ .+.++++|+||.
T Consensus 14 M~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~~~~~~v--~~dl~~~~--~~~~~~vDvVf~ 88 (359)
T 1xyg_A 14 EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFPHLRAQK--LPTLVSVK--DADFSTVDAVFC 88 (359)
T ss_dssp -CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCGGGTTSC--CCCCBCGG--GCCGGGCSEEEE
T ss_pred ccCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCchhcCcc--cccceecc--hhHhcCCCEEEE
Confidence 345799999999999999999999876 4888887653321 111110 0000110 13332222 334568999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
|++... +...+..+ +.| + ++|-.|+..
T Consensus 89 atp~~~--------------s~~~a~~~-~aG-~-~VId~sa~~ 115 (359)
T 1xyg_A 89 CLPHGT--------------TQEIIKEL-PTA-L-KIVDLSADF 115 (359)
T ss_dssp CCCTTT--------------HHHHHHTS-CTT-C-EEEECSSTT
T ss_pred cCCchh--------------HHHHHHHH-hCC-C-EEEECCccc
Confidence 986531 24556666 777 5 677777754
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.05 E-value=2.8e-06 Score=68.35 Aligned_cols=98 Identities=20% Similarity=0.230 Sum_probs=64.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhH---HHHHhc--cccEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT---IKATMA--KANVV 80 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~---~~~~~~--~~d~v 80 (327)
..++|+|+||+|-+|..+++.+...|.+|++++|++++.. .....+ ... ..|..+.+. +.+... ++|+|
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~-~~~~~g----~~~-~~d~~~~~~~~~~~~~~~~~~~D~v 111 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE-MLSRLG----VEY-VGDSRSVDFADEILELTDGYGVDVV 111 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHTTC----CSE-EEETTCSTHHHHHHHHTTTCCEEEE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHcC----CCE-EeeCCcHHHHHHHHHHhCCCCCeEE
Confidence 3578999999999999999999999999999998765422 222222 221 246655433 333332 48999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
|+++|.. .....++.++..| ++|.+++..
T Consensus 112 i~~~g~~--------------~~~~~~~~l~~~G---~~v~~g~~~ 140 (198)
T 1pqw_A 112 LNSLAGE--------------AIQRGVQILAPGG---RFIELGKKD 140 (198)
T ss_dssp EECCCTH--------------HHHHHHHTEEEEE---EEEECSCGG
T ss_pred EECCchH--------------HHHHHHHHhccCC---EEEEEcCCC
Confidence 9998731 1234445444444 888887755
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=4.1e-06 Score=73.00 Aligned_cols=109 Identities=14% Similarity=0.035 Sum_probs=73.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcc-------cCCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKL-------MGDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~-------~~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
+|||.|+|| |.+|..++..|...|+ +|++++++++........ .....++.. ..++.++++++|
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~~ea~~~aD 80 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-------EYSYEAALTGAD 80 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-------ECSHHHHHTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-------eCCHHHHhCCCC
Confidence 479999999 9999999999999998 999999987654321110 010011211 123455789999
Q ss_pred EEEEccccccc--c-----CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 79 VVINLIGREYE--T-----RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 79 ~vi~~a~~~~~--~-----~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+||-+++.+.. . ...+....|....+.+.+.+.+.. .+-++...|
T Consensus 81 iVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t 132 (331)
T 1pzg_A 81 CVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVT 132 (331)
T ss_dssp EEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred EEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEc
Confidence 99999976432 2 334566678888888998888876 344444433
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=98.02 E-value=9.4e-07 Score=72.02 Aligned_cols=74 Identities=16% Similarity=0.173 Sum_probs=50.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|+|+|+||+|.+|+.+++.|++.|++|++++|++++........+. .+. ..|+. .+++.++++++|+||++...
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~--~~~~~-~~~~~~~~~~~D~Vi~~~~~ 74 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR--IAG--DASIT-GMKNEDAAEACDIAVLTIPW 74 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH--HHS--SCCEE-EEEHHHHHHHCSEEEECSCH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc--ccc--cCCCC-hhhHHHHHhcCCEEEEeCCh
Confidence 5899999999999999999999999999999986543221111110 000 01222 23456677889999999863
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.02 E-value=1.6e-05 Score=69.53 Aligned_cols=97 Identities=8% Similarity=0.041 Sum_probs=60.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+++|.|.||||++|+.+++.|++++ .+++++.+..+.. ..+... +.+.... ...+.+.+ + +.++|+||.|+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~~~~g~~--~~~~~~~~---~-~~~vDvV~~a~ 76 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHPNLRGRT--NLKFVPPE---K-LEPADILVLAL 76 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCGGGTTTC--CCBCBCGG---G-CCCCSEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCchhcCcc--cccccchh---H-hcCCCEEEEcC
Confidence 5799999999999999999999876 4888877643321 111110 0000100 01112222 2 47899999998
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+.. ....+++.+.++| + ++|-.|+..
T Consensus 77 g~~--------------~s~~~a~~~~~aG-~-~VId~Sa~~ 102 (345)
T 2ozp_A 77 PHG--------------VFAREFDRYSALA-P-VLVDLSADF 102 (345)
T ss_dssp CTT--------------HHHHTHHHHHTTC-S-EEEECSSTT
T ss_pred CcH--------------HHHHHHHHHHHCC-C-EEEEcCccc
Confidence 753 2345667777788 5 688888754
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.99 E-value=2e-05 Score=68.78 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=58.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC---EEEEee-CCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS---QVLVPF-RGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~-R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+|+|+|+||||.+|+.+++.|+++++ +++++. |+..... +. . .+......|. +++ .+.++|+||.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~--~~-~---~g~~i~~~~~-~~~----~~~~~DvV~~ 74 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR--MG-F---AESSLRVGDV-DSF----DFSSVGLAFF 74 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE--EE-E---TTEEEECEEG-GGC----CGGGCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc--cc-c---CCcceEEecC-CHH----HhcCCCEEEE
Confidence 47899999999999999999997654 566664 3221111 11 1 0111111122 222 2468999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
|.+.. .+..+++.+.+.| + ++|.+|+..-
T Consensus 75 a~g~~--------------~s~~~a~~~~~aG-~-kvId~Sa~~r 103 (340)
T 2hjs_A 75 AAAAE--------------VSRAHAERARAAG-C-SVIDLSGALE 103 (340)
T ss_dssp CSCHH--------------HHHHHHHHHHHTT-C-EEEETTCTTT
T ss_pred cCCcH--------------HHHHHHHHHHHCC-C-EEEEeCCCCC
Confidence 98742 2456777888888 6 4777777553
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=3.8e-06 Score=72.67 Aligned_cols=113 Identities=15% Similarity=0.052 Sum_probs=74.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhh---hcccCC--CCCeeEEeeCCCChhHHHHHhccc
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRH---LKLMGD--LGQIVPMKFNPRDDNTIKATMAKA 77 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~---~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~~ 77 (327)
.|+++||.|+|+ |.+|..++..|+..|+ +|+++++++++.... +..... .....+...+ + . ++++++
T Consensus 4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~--d---~-~a~~~a 76 (324)
T 3gvi_A 4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAN--D---Y-AAIEGA 76 (324)
T ss_dssp --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEES--S---G-GGGTTC
T ss_pred CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeC--C---H-HHHCCC
Confidence 356689999999 9999999999999998 999999987653211 111000 0012222111 2 2 478899
Q ss_pred cEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 78 NVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 78 d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|+||.++|.... ....+....|......+++.+.+.++-..++.+|
T Consensus 77 DiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvt 124 (324)
T 3gvi_A 77 DVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICIT 124 (324)
T ss_dssp SEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence 999999986532 2345677889999999999998887322455555
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.93 E-value=8e-06 Score=70.67 Aligned_cols=112 Identities=13% Similarity=0.008 Sum_probs=75.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCC-----CCeeEEeeCCCChhHHHHHhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDL-----GQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
|++|||.|+|+ |.+|..++..|+..|. +|+++++++++.......+... ....+...+ + .++++++|
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d----~~a~~~aD 75 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--D----YKDLENSD 75 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--C----GGGGTTCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--C----HHHHCCCC
Confidence 45689999996 9999999999999887 9999999876532111111100 112222111 2 24788999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+||.++|.... ....+....|......+++.+.+.++-..++.+|
T Consensus 76 vVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 76 VVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred EEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 99999987533 2334667889999999999998887322455554
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.92 E-value=3.3e-05 Score=67.91 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=59.8
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhccc-CCC---------CCeeEEeeCCCChhHHHHHh
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLM-GDL---------GQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~-~~~---------~~v~~~~~Dl~~~~~~~~~~ 74 (327)
|+++|.|.||||++|+.+++.|++++ .+|+++.++++.....+... +.. .++.+... ++++ .+
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~ 80 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACYWFQDRDIPENIKDMVVIPT---DPKH---EE 80 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSCCCCSSCCCHHHHTCBCEES---CTTS---GG
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcccccccccccCceeeEEEeC---CHHH---Hh
Confidence 34799999999999999999998775 68888876433221212110 000 01111111 2232 33
Q ss_pred c-cccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 75 A-KANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 75 ~-~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+ ++|+||.|.+.. ....+++.+.+.| + ++|-.|+..
T Consensus 81 ~~~~DvV~~atp~~--------------~~~~~a~~~~~aG-~-~VId~s~~~ 117 (354)
T 1ys4_A 81 FEDVDIVFSALPSD--------------LAKKFEPEFAKEG-K-LIFSNASAY 117 (354)
T ss_dssp GTTCCEEEECCCHH--------------HHHHHHHHHHHTT-C-EEEECCSTT
T ss_pred cCCCCEEEECCCch--------------HHHHHHHHHHHCC-C-EEEECCchh
Confidence 5 899999998642 2345666777788 4 577666643
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.91 E-value=4.3e-05 Score=65.71 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=73.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-C--CEEEEeeCCCCCchhhhcccCCCC-CeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-G--SQVLVPFRGCEDDPRHLKLMGDLG-QIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g--~~V~~~~R~~~~~~~~~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|||.|+||+|.+|+.++..|..+ + .+++++++++ ........+...+ .++.... .. +...+.++++|+||.+
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~-~~--~~~~~~~~~aDivii~ 76 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-SG--EDATPALEGADVVLIS 76 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEE-CS--SCCHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEe-cC--CCcHHHhCCCCEEEEe
Confidence 68999999999999999988775 4 5899998876 3221111111111 1222110 00 1224567899999999
Q ss_pred cccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 84 IGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 84 a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+|.... ....+....|....+.+.+++.+.++-..++.+|
T Consensus 77 ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt 118 (312)
T 3hhp_A 77 AGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (312)
T ss_dssp CSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence 987543 2346788899999999999998887322455444
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=1.6e-05 Score=68.79 Aligned_cols=111 Identities=11% Similarity=0.017 Sum_probs=65.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchh---hhcccCC-CCCeeEEeeCCCChhHHHHHhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPR---HLKLMGD-LGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~---~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
..++||.|+|+ |.+|+.++..|+..|. ++.+++++.++... .+..... ...+.....| .+.++++|
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aD 78 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDAD 78 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCC
Confidence 34689999997 9999999999998886 89999986543221 1111000 0133333222 24678999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+||.++|.... ....+....|......+++.+.+.++-..++.+|
T Consensus 79 iVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt 125 (326)
T 3vku_A 79 LVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp EEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred EEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence 99999987532 2345678889988999999998887322444444
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.88 E-value=9.5e-06 Score=73.94 Aligned_cols=74 Identities=7% Similarity=0.169 Sum_probs=60.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
.|+|+|.|+ |.+|++|++.|.+.|++|+++.++++......... ++..+.||-++++.|.++ ++++|.+|-+.+
T Consensus 3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY----DLRVVNGHASHPDVLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS----SCEEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence 589999999 99999999999999999999999876533222222 478899999999999887 577999986553
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.88 E-value=1.6e-05 Score=70.48 Aligned_cols=77 Identities=16% Similarity=0.140 Sum_probs=58.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++|+|+|+ |.+|+.+++.|...|.+|++++|++++........+ .. +.+|..+.+++.++++++|+||+++
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g----~~-~~~~~~~~~~l~~~~~~~DvVi~~~ 237 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG----GR-VITLTATEANIKKSVQHADLLIGAV 237 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT----TS-EEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC----ce-EEEecCCHHHHHHHHhCCCEEEECC
Confidence 34589999999 999999999999999999999998754322111122 11 4567777888999999999999999
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+..
T Consensus 238 g~~ 240 (369)
T 2eez_A 238 LVP 240 (369)
T ss_dssp C--
T ss_pred CCC
Confidence 864
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.84 E-value=1.6e-05 Score=68.38 Aligned_cols=81 Identities=16% Similarity=0.206 Sum_probs=57.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCC---CchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCE---DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
...++++|+|+ |-+|+.++..|.+.|. +|++++|+++ +...............+...++.+.+++.+.+.++|+|
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiI 230 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIF 230 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEE
Confidence 45689999998 7899999999999997 8999999843 32221111110011333445677777888888999999
Q ss_pred EEcccc
Q 047628 81 INLIGR 86 (327)
Q Consensus 81 i~~a~~ 86 (327)
|++.+.
T Consensus 231 INaTp~ 236 (315)
T 3tnl_A 231 TNATGV 236 (315)
T ss_dssp EECSST
T ss_pred EECccC
Confidence 999865
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.82 E-value=3.9e-05 Score=66.08 Aligned_cols=112 Identities=15% Similarity=0.078 Sum_probs=73.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCC--CCchhh---hcccCC--CCCeeEEeeCCCChhHHHHHhcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGC--EDDPRH---LKLMGD--LGQIVPMKFNPRDDNTIKATMAK 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~--~~~~~~---~~~~~~--~~~v~~~~~Dl~~~~~~~~~~~~ 76 (327)
|+.++|.|+|+ |.+|..++..|+..|+ +|+++++++ ...... +..... .....+...+ + .+.+++
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d----~~a~~~ 78 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--D----YADTAD 78 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--C----GGGGTT
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--C----HHHhCC
Confidence 44579999997 9999999999999999 999999984 221110 100000 0011121111 2 246789
Q ss_pred ccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 77 ANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 77 ~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+|+||-++|.... ....+....|....+.+.+.+.+.++-..++.+|
T Consensus 79 aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs 127 (315)
T 3tl2_A 79 SDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLT 127 (315)
T ss_dssp CSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred CCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence 9999999987543 2345678889999999999998887322455555
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.79 E-value=1.8e-05 Score=69.49 Aligned_cols=74 Identities=24% Similarity=0.246 Sum_probs=53.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-----cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-----KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-----~~d~vi 81 (327)
..+|||+|++|-+|..+++.+...|.+|++++|++++. ......+ .. ...|+.+.+++.+.+. ++|+||
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~~g----~~-~~~d~~~~~~~~~~~~~~~~~~~D~vi 243 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRSIG----GE-VFIDFTKEKDIVGAVLKATDGGAHGVI 243 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHHTT----CC-EEEETTTCSCHHHHHHHHHTSCEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHHcC----Cc-eEEecCccHhHHHHHHHHhCCCCCEEE
Confidence 57899999999999999999999999999999987653 3333333 22 1236664334433332 589999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
+++|.
T Consensus 244 ~~~g~ 248 (347)
T 2hcy_A 244 NVSVS 248 (347)
T ss_dssp ECSSC
T ss_pred ECCCc
Confidence 99874
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.76 E-value=3.5e-05 Score=67.37 Aligned_cols=86 Identities=7% Similarity=-0.078 Sum_probs=67.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~ 86 (327)
++++|+|+ |.+|+.+++.|.+.|+ |++++++++... +.. .++.++.+|.++++.+.++ ++++|+|+-+.+.
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~--~~~----~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~~ 187 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK--VLR----SGANFVHGDPTRVSDLEKANVRGARAVIVDLES 187 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH--HHH----TTCEEEESCTTSHHHHHHTCSTTEEEEEECCSS
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh--HHh----CCcEEEEeCCCCHHHHHhcChhhccEEEEcCCc
Confidence 58999997 9999999999999999 999988876543 332 3588999999999999987 7889999977642
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
. .....++..+++.+
T Consensus 188 d-------------~~n~~~~~~ar~~~ 202 (336)
T 1lnq_A 188 D-------------SETIHCILGIRKID 202 (336)
T ss_dssp H-------------HHHHHHHHHHHTTC
T ss_pred c-------------HHHHHHHHHHHHHC
Confidence 1 12234566677776
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.75 E-value=5.8e-05 Score=66.19 Aligned_cols=97 Identities=18% Similarity=0.182 Sum_probs=59.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccC-CC---------CCeeEEeeCCCChhHHHHHh
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMG-DL---------GQIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~-~~---------~~v~~~~~Dl~~~~~~~~~~ 74 (327)
++++|.|.||||++|+.+++.|+++. .+++++..+.+.....+.... .. ..+.+ .|+ +++. +
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~-d~~~----~ 75 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWIEQGDIPEEVQDLPI--VST-NYED----H 75 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCCSSSSCCHHHHTCBE--ECS-SGGG----G
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcccccccccCCceeEE--eeC-CHHH----h
Confidence 35799999999999999999988764 588888522111111111100 00 01112 232 3333 3
Q ss_pred ccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 75 AKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 75 ~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
.++|+||.|.+.. ....++..+.+.| + ++|-.|+.
T Consensus 76 ~~vDvVf~atp~~--------------~s~~~a~~~~~aG-~-~VId~s~~ 110 (350)
T 2ep5_A 76 KDVDVVLSALPNE--------------LAESIELELVKNG-K-IVVSNASP 110 (350)
T ss_dssp TTCSEEEECCCHH--------------HHHHHHHHHHHTT-C-EEEECSST
T ss_pred cCCCEEEECCChH--------------HHHHHHHHHHHCC-C-EEEECCcc
Confidence 6899999887642 2456777888888 5 57766664
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=5.5e-06 Score=70.70 Aligned_cols=109 Identities=9% Similarity=0.021 Sum_probs=74.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchh---hhcccC-CC-CCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPR---HLKLMG-DL-GQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~---~~~~~~-~~-~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|||.|+|+ |.+|..++..|+..|+ +|.+++++++.... .+.... .. ....+...+ | .++++++|+|
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t~--d----~~a~~~aDiV 73 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--D----YSLLKGSEII 73 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--C----GGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEeC--C----HHHhCCCCEE
Confidence 68999999 9999999999999887 99999998755321 111100 00 112222111 2 4578899999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|.++|.... ....++...|....+.+++.+.+.++-..++.+|
T Consensus 74 Viaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs 118 (294)
T 1oju_A 74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred EECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 999987533 2335677889999999999999887323455555
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0002 Score=62.36 Aligned_cols=115 Identities=10% Similarity=0.021 Sum_probs=74.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCC-------EEEEeeCCCCCch-----hhhcccCCCCCe-eEEeeCCCChhHH
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGS-------QVLVPFRGCEDDP-----RHLKLMGDLGQI-VPMKFNPRDDNTI 70 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~-------~V~~~~R~~~~~~-----~~~~~~~~~~~v-~~~~~Dl~~~~~~ 70 (327)
+|+..||.|+||+|.||++|+-.|..... ++.+++..+.... ..+.. ...+.. ....++ ..
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~-~~~~~~~~~~~~~-----~~ 94 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELED-CAFPLLDKVVVTA-----DP 94 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHH-TTCTTEEEEEEES-----CH
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhh-cCccCCCcEEEcC-----Ch
Confidence 35567999999999999999988876532 7888877543210 11111 111111 222221 23
Q ss_pred HHHhccccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcC-CcceEEEEec
Q 047628 71 KATMAKANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISC 124 (327)
Q Consensus 71 ~~~~~~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss 124 (327)
.++++++|+||-+||.+.. ....+++..|....+.+.+++.+.. +-..++.+|.
T Consensus 95 ~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN 151 (345)
T 4h7p_A 95 RVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN 151 (345)
T ss_dssp HHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence 5678999999999997543 3456889999999999999988753 1224555553
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.0002 Score=59.63 Aligned_cols=103 Identities=15% Similarity=0.122 Sum_probs=67.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCC-------------------chh---hhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCED-------------------DPR---HLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~-------------------~~~---~~~~~~~~~~v~~~~~ 62 (327)
..++|+|+|+ |-+|+.+++.|...|. ++++++++.-. ... .+.......+++.+..
T Consensus 30 ~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 30 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 3578999998 7899999999999996 89999887621 111 1111111123445555
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
++. ++.+.+.++++|+||.+... ...-..+.++|++.+ + .+|+.+..
T Consensus 109 ~~~-~~~~~~~~~~~DvVi~~~d~-------------~~~~~~l~~~~~~~~-~-p~i~~~~~ 155 (249)
T 1jw9_B 109 LLD-DAELAALIAEHDLVLDCTDN-------------VAVRNQLNAGCFAAK-V-PLVSGAAI 155 (249)
T ss_dssp CCC-HHHHHHHHHTSSEEEECCSS-------------HHHHHHHHHHHHHHT-C-CEEEEEEE
T ss_pred cCC-HhHHHHHHhCCCEEEEeCCC-------------HHHHHHHHHHHHHcC-C-CEEEeeec
Confidence 554 45677788899999998742 122345677788877 4 46665543
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=2.9e-05 Score=67.28 Aligned_cols=101 Identities=14% Similarity=0.065 Sum_probs=66.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCC-----CCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
+|||.|+|+ |.+|..++..|+..|+ +|+++++++++.......... ....++... ++ + ++++++|+|
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d---~-~al~~aD~V 76 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NT---Y-DDLAGADVV 76 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CC---G-GGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CC---H-HHhCCCCEE
Confidence 469999999 9999999999999998 999999887643211111000 001111111 12 3 468899999
Q ss_pred EEccccccccC-------cchhHhhhhHHHHHHHHHHHHcC
Q 047628 81 INLIGREYETR-------NYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 81 i~~a~~~~~~~-------~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
|-+++.+.... ..+....|....+.+.+.+.+..
T Consensus 77 i~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~ 117 (322)
T 1t2d_A 77 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC 117 (322)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred EEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99997643211 34556667778888888887775
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00012 Score=63.75 Aligned_cols=94 Identities=16% Similarity=0.265 Sum_probs=59.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++|+|.||||++|+.+++.|++++ .+++++....+. ...+. +.. ..+.+ .|+ +++ .+.++|+||.|
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~-G~~~~-~~~-~~i~~--~~~-~~~----~~~~vDvVf~a 72 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSE-GKTYR-FNG-KTVRV--QNV-EEF----DWSQVHIALFS 72 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTT-TCEEE-ETT-EEEEE--EEG-GGC----CGGGCSEEEEC
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCC-CCcee-ecC-ceeEE--ecC-ChH----HhcCCCEEEEC
Confidence 5799999999999999999999873 577777632211 11111 110 12222 222 222 34689999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.+.. .+...++.+.+.| + ++|-.|+..
T Consensus 73 ~g~~--------------~s~~~a~~~~~~G-~-~vId~s~~~ 99 (336)
T 2r00_A 73 AGGE--------------LSAKWAPIAAEAG-V-VVIDNTSHF 99 (336)
T ss_dssp SCHH--------------HHHHHHHHHHHTT-C-EEEECSSTT
T ss_pred CCch--------------HHHHHHHHHHHcC-C-EEEEcCCcc
Confidence 8752 2356677777888 5 677777753
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=2e-05 Score=68.77 Aligned_cols=74 Identities=22% Similarity=0.240 Sum_probs=52.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh-----ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM-----AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-----~~~d~vi 81 (327)
.+++||+|++|-+|..+++.+...|.+|++++|++++... .+..+ .. ...|..+.+++.+.+ .++|+||
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~-~~~~g----~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi 219 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY-LKQIG----FD-AAFNYKTVNSLEEALKKASPDGYDCYF 219 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHTT----CS-EEEETTSCSCHHHHHHHHCTTCEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhcC----Cc-EEEecCCHHHHHHHHHHHhCCCCeEEE
Confidence 5789999999999999999999999999999987654322 23333 11 234665523333322 2589999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
+++|.
T Consensus 220 ~~~g~ 224 (333)
T 1v3u_A 220 DNVGG 224 (333)
T ss_dssp ESSCH
T ss_pred ECCCh
Confidence 99983
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00028 Score=61.84 Aligned_cols=94 Identities=15% Similarity=0.209 Sum_probs=57.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++|.|+||||++|..|++.|.++++ ++..+.-..+. .+.+...+ .++.+. ++. ++ .++++|+||.|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~sa-G~~~~~~~--~~~~~~--~~~-~~----~~~~~Dvvf~a 71 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLKFKD--QDITIE--ETT-ET----AFEGVDIALFS 71 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTT-TCEEEETT--EEEEEE--ECC-TT----TTTTCSEEEEC
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccC-CCcceecC--CCceEe--eCC-HH----HhcCCCEEEEC
Confidence 57999999999999999998888765 44555422221 11111111 112222 222 22 24789999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
++. ..+...+..+.+.| . ++|=.|+..
T Consensus 72 ~~~--------------~~s~~~a~~~~~~G-~-~vIDlSa~~ 98 (366)
T 3pwk_A 72 AGS--------------STSAKYAPYAVKAG-V-VVVDNTSYF 98 (366)
T ss_dssp SCH--------------HHHHHHHHHHHHTT-C-EEEECSSTT
T ss_pred CCh--------------HhHHHHHHHHHHCC-C-EEEEcCCcc
Confidence 864 22355666677778 5 677777753
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00015 Score=61.24 Aligned_cols=99 Identities=13% Similarity=0.179 Sum_probs=60.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEe-eCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVP-FRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+++||.|.|++|.+|+.+++.+.+. +.++.++ +|+++.. ........ .+. ..++.-.+++.+++.++|+||+
T Consensus 20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~---G~~--~~gv~v~~dl~~ll~~aDVvID 94 (288)
T 3ijp_A 20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILI---GSD--FLGVRITDDPESAFSNTEGILD 94 (288)
T ss_dssp -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGT---TCS--CCSCBCBSCHHHHTTSCSEEEE
T ss_pred CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhh---ccC--cCCceeeCCHHHHhcCCCEEEE
Confidence 3579999999999999999998865 6786665 5543321 11111110 010 1111112356667788999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+..+ ..+...++.|.++| + .+| ++|.+
T Consensus 95 FT~p--------------~a~~~~~~~~l~~G-v-~vV-iGTTG 121 (288)
T 3ijp_A 95 FSQP--------------QASVLYANYAAQKS-L-IHI-IGTTG 121 (288)
T ss_dssp CSCH--------------HHHHHHHHHHHHHT-C-EEE-ECCCC
T ss_pred cCCH--------------HHHHHHHHHHHHcC-C-CEE-EECCC
Confidence 9743 34566778888888 5 555 44444
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00012 Score=63.53 Aligned_cols=109 Identities=10% Similarity=0.033 Sum_probs=71.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCC----CCeeEEeeCCCChhHHHHHhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDL----GQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
+|||.|+|+ |.+|..++..|+..+. ++.+++++.++.......+... .++++. .| + .++++++|+|
T Consensus 9 ~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~----~~a~~~aDvV 80 (326)
T 2zqz_A 9 HQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--E----YSDAKDADLV 80 (326)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----GGGGGGCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--C----HHHhCCCCEE
Confidence 579999999 9999999999988775 8999998754432211111100 123332 22 2 3458899999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|.+++.... ....+....|......+++.+.+.++-..++.+|
T Consensus 81 ii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 81 VITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp EECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 999987533 2234567788888899999988886323444443
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.66 E-value=8.7e-05 Score=63.87 Aligned_cols=109 Identities=16% Similarity=0.045 Sum_probs=72.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCC-----CCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|||.|+|+ |.+|+.++..|+..|. +|+++++++.+.......+.. ..+..+...| + .++++++|+|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~aDvV 73 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDSDVC 73 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCCCEE
Confidence 68999997 9999999999998886 899999987653211110000 0112222122 2 3467899999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|.++|.... ....+....|....+.+.+.+.+.++-..++.+|
T Consensus 74 ii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 118 (314)
T 3nep_X 74 IITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA 118 (314)
T ss_dssp EECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred EECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence 999987533 3346788889999999999999887322444444
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00011 Score=63.58 Aligned_cols=109 Identities=12% Similarity=0.064 Sum_probs=69.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCC----CCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGD----LGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
.|||.|+|+ |.+|..++..|+..+. ++.+++++.++.......+.. ..++++. .| + .++++++|+|
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~----~~a~~~aDvV 76 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E----YSDCKDADLV 76 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C----GGGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C----HHHhCCCCEE
Confidence 379999999 9999999999988775 899999875443211111100 0123332 22 2 3458899999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|.+++.... ....+....|......+++.+.+.++-..++.+|
T Consensus 77 ii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 77 VITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp EECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 999987532 2334667788889999999998887322444443
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00014 Score=62.99 Aligned_cols=112 Identities=13% Similarity=0.003 Sum_probs=75.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhh---hcccCCCC-CeeEEeeCCCChhHHHHHhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRH---LKLMGDLG-QIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~---~~~~~~~~-~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
...+||.|+|+ |.+|..++..|+..|. ++++++++.++.... +....... ....+..+ +.+ .++++|
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~~--d~~----~~~~aD 89 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSSK--DYS----VTANSK 89 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEECS--SGG----GGTTEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEcC--CHH----HhCCCC
Confidence 34689999998 9999999999999886 899999875432211 11100011 11222221 322 578999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+||.++|.... ....+....|....+.+.+.+.+..+-..++.+|
T Consensus 90 iVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt 136 (331)
T 4aj2_A 90 LVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVS 136 (331)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999987532 3456788999999999999998887322455444
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00016 Score=59.89 Aligned_cols=72 Identities=15% Similarity=0.236 Sum_probs=51.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|+|+|+|++|.+|+.+++.+.+. ++++.++.... .+.+.+.. .++|+||.++.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~-----------------------~dl~~~~~--~~~DvvIDfT~p 55 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG-----------------------DPLSLLTD--GNTEVVIDFTHP 55 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT-----------------------CCTHHHHH--TTCCEEEECSCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC-----------------------CCHHHHhc--cCCcEEEEccCh
Confidence 58999999999999999999876 89988776432 12222221 368999988754
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEE
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v 120 (327)
. .+...++.|.++| + ++|
T Consensus 56 ~--------------a~~~~~~~a~~~g-~-~~V 73 (245)
T 1p9l_A 56 D--------------VVMGNLEFLIDNG-I-HAV 73 (245)
T ss_dssp T--------------THHHHHHHHHHTT-C-EEE
T ss_pred H--------------HHHHHHHHHHHcC-C-CEE
Confidence 2 2456788888888 5 444
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00019 Score=62.24 Aligned_cols=99 Identities=13% Similarity=0.140 Sum_probs=60.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCC-C-Cchhhhc----ccCCCCCeeEEeeCCCChhHHHHHhccccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGC-E-DDPRHLK----LMGDLGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~-~-~~~~~~~----~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
|++|.|+||||++|+.+++.|.++ ++++..+.++. + ...+.+. .+....++.+... .+.+ ++++++|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~Dv 78 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGVDV 78 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTCSE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCCCE
Confidence 479999999999999999999885 56888775543 1 1111111 1111112222221 0222 22368999
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
||.|.+.. .+..++..+.+.| . ++|=.|+..
T Consensus 79 vf~a~p~~--------------~s~~~~~~~~~~g-~-~vIDlSa~f 109 (337)
T 3dr3_A 79 VFLATAHE--------------VSHDLAPQFLEAG-C-VVFDLSGAF 109 (337)
T ss_dssp EEECSCHH--------------HHHHHHHHHHHTT-C-EEEECSSTT
T ss_pred EEECCChH--------------HHHHHHHHHHHCC-C-EEEEcCCcc
Confidence 99987642 2355666777778 4 677788754
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00019 Score=61.70 Aligned_cols=104 Identities=16% Similarity=0.163 Sum_probs=65.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCC----CCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDL----GQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~----~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
|||.|+|+ |.+|..++..|+..|+ +|+++++++++........... ...++.. + +. ++++++|+||
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~-~--~~----~a~~~aDvVI 72 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH-G--GH----SELADAQVVI 72 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE-E--CG----GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE-C--CH----HHhCCCCEEE
Confidence 58999999 9999999999999998 9999999864322111111100 1122221 1 22 3578999999
Q ss_pred Ecccccc--ccCcchhHhhhhHHHHHHHHHHHHcCCcceEE
Q 047628 82 NLIGREY--ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120 (327)
Q Consensus 82 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v 120 (327)
.+++... .....+....|......+++.+.+.+ ...++
T Consensus 73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~~~v 112 (304)
T 2v6b_A 73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAA-PDAVL 112 (304)
T ss_dssp ECC------------CHHHHHHHHHHHHHHHHHHC-SSSEE
T ss_pred EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhC-CCeEE
Confidence 9997543 22334566778888888988888775 34333
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00041 Score=61.06 Aligned_cols=87 Identities=11% Similarity=0.096 Sum_probs=53.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHH-hCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLA-KMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll-~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|++|.|.||||++|+.+++.|+ ++++ +++.+..+... ..+.... +......|..+++.+ +++|+||.
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s~G--~~v~~~~---g~~i~~~~~~~~~~~----~~~DvVf~ 71 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLG--QAAPSFG---GTTGTLQDAFDLEAL----KALDIIVT 71 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCGGG---TCCCBCEETTCHHHH----HTCSEEEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCCCC--CCccccC---CCceEEEecCChHHh----cCCCEEEE
Confidence 3689999999999999999544 4543 56666554221 1121111 112223344455543 58999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcc
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM 117 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~ 117 (327)
|.+. ..+..++..+.+.| .+
T Consensus 72 a~g~--------------~~s~~~a~~~~~~G-~k 91 (367)
T 1t4b_A 72 CQGG--------------DYTNEIYPKLRESG-WQ 91 (367)
T ss_dssp CSCH--------------HHHHHHHHHHHHTT-CC
T ss_pred CCCc--------------hhHHHHHHHHHHCC-CC
Confidence 9874 23456677777888 64
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00018 Score=64.75 Aligned_cols=72 Identities=17% Similarity=0.151 Sum_probs=56.6
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+.+++++|+|+|+ |.+|+.+++.+.+.|++|++++.++......+. -..+..|+.|.+.+.++++++|+|+.
T Consensus 31 ~~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a-------d~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 31 PILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA-------DRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS-------SEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC-------CEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 3445679999998 899999999999999999999876554322221 23556889999999999989999984
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00031 Score=61.92 Aligned_cols=100 Identities=17% Similarity=0.110 Sum_probs=58.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEee--CCCC-Cchhhh-cccCC------CCCeeEEeeCCCChhHHHHH
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPF--RGCE-DDPRHL-KLMGD------LGQIVPMKFNPRDDNTIKAT 73 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~--R~~~-~~~~~~-~~~~~------~~~v~~~~~Dl~~~~~~~~~ 73 (327)
|++++|.|+||||++|..+++.|.++. .++..+. ++.. +..... ..... ..++.+...| ..+ .
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~aS~~saGk~~~~~~~~~~~~~~p~~~~~~~v~~~~--~~~----~ 90 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALGASSRSAGKKYKDAASWKQTETLPETEQDIVVQECK--PEG----N 90 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHCCCCCSSCCCHHHHTCBCEESS--SCT----T
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEeeccccccCCCHHHhcccccccccccccccceEEeCc--hhh----h
Confidence 566799999999999999999888775 4676553 3222 211111 00000 0012221211 111 2
Q ss_pred hccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 74 MAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 74 ~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
++++|+||.|.+. ..+..++..+.+.| . ++|=.|+..
T Consensus 91 ~~~~Dvvf~alp~--------------~~s~~~~~~~~~~G-~-~VIDlSa~f 127 (381)
T 3hsk_A 91 FLECDVVFSGLDA--------------DVAGDIEKSFVEAG-L-AVVSNAKNY 127 (381)
T ss_dssp GGGCSEEEECCCH--------------HHHHHHHHHHHHTT-C-EEEECCSTT
T ss_pred cccCCEEEECCCh--------------hHHHHHHHHHHhCC-C-EEEEcCCcc
Confidence 4689999999764 22355667777778 4 677777754
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=4.6e-05 Score=67.20 Aligned_cols=97 Identities=16% Similarity=0.175 Sum_probs=62.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhc-cccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMA-KANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~-~~d~vi~ 82 (327)
.+|||+||+|-+|..+++.+...|. +|++++|++++........+ .. ...|..+.+ .+.+... ++|+||+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g----~~-~~~d~~~~~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELG----FD-AAINYKKDNVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC----CS-EEEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC----Cc-eEEecCchHHHHHHHHhcCCCCCEEEE
Confidence 7899999999999999999999999 99999987654322211133 11 234655433 2333222 5899999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
++|. ......++.++..| +++.++...
T Consensus 237 ~~G~--------------~~~~~~~~~l~~~G---~iv~~G~~~ 263 (357)
T 2zb4_A 237 NVGG--------------NISDTVISQMNENS---HIILCGQIS 263 (357)
T ss_dssp SCCH--------------HHHHHHHHTEEEEE---EEEECCCGG
T ss_pred CCCH--------------HHHHHHHHHhccCc---EEEEECCcc
Confidence 9983 11233444444444 788777643
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.56 E-value=8.5e-05 Score=61.40 Aligned_cols=62 Identities=11% Similarity=0.097 Sum_probs=41.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEE-eeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLV-PFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~-~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+||||+|+|+ |.+|+.+++.+.+.+.++.+ ++|+.+.. .++.. ..|+ .+++ ++|+||+++
T Consensus 2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~----------~gv~v-~~dl------~~l~-~~DVvIDft 62 (243)
T 3qy9_A 2 ASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKAT----------TPYQQ-YQHI------ADVK-GADVAIDFS 62 (243)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC------------CCSCB-CSCT------TTCT-TCSEEEECS
T ss_pred CceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCcccc----------CCCce-eCCH------HHHh-CCCEEEEeC
Confidence 3589999999 99999999999988667666 45554321 11221 1222 2234 789999998
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
.+
T Consensus 63 ~p 64 (243)
T 3qy9_A 63 NP 64 (243)
T ss_dssp CH
T ss_pred Ch
Confidence 54
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.56 E-value=4.5e-05 Score=69.22 Aligned_cols=80 Identities=14% Similarity=0.129 Sum_probs=50.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCeeE-E-----eeCCCChhHHHHHhcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIVP-M-----KFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~~-~-----~~Dl~~~~~~~~~~~~~d 78 (327)
+|+|.|+|+ |.+|..++..|.+.|++|++++|++++.......... .+.+.- + .+.+.-..++.++++++|
T Consensus 2 ~mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 2 SLDIAVVGI-GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 379999998 9999999999999999999999987653221111000 000000 0 001111124556778999
Q ss_pred EEEEccccc
Q 047628 79 VVINLIGRE 87 (327)
Q Consensus 79 ~vi~~a~~~ 87 (327)
+||-|.+..
T Consensus 81 vViiaVptp 89 (450)
T 3gg2_A 81 IIFIAVGTP 89 (450)
T ss_dssp EEEECCCCC
T ss_pred EEEEEcCCC
Confidence 999988654
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=3.2e-05 Score=66.92 Aligned_cols=111 Identities=13% Similarity=0.130 Sum_probs=72.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhh---hcccCC-C-CCeeEEeeCCCChhHHHHHhccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRH---LKLMGD-L-GQIVPMKFNPRDDNTIKATMAKA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~---~~~~~~-~-~~v~~~~~Dl~~~~~~~~~~~~~ 77 (327)
|++|||.|+|+ |.+|..++..|+..| .+|.++++++++.... +..... . .++++. +| + .++++++
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~----~~a~~~a 75 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--E----YSDCHDA 75 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--C----GGGGTTC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--C----HHHhCCC
Confidence 44579999999 999999999998887 4899998875432211 111000 0 122222 22 2 4457899
Q ss_pred cEEEEcccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 78 NVVINLIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 78 d~vi~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|+||.+++..... ...+....|......+++.+.+.+ ..-++.+.|
T Consensus 76 DvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~t 123 (317)
T 3d0o_A 76 DLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASK-FDGIFLVAT 123 (317)
T ss_dssp SEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred CEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEec
Confidence 9999999875432 224566778888889999888887 344444433
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.53 E-value=1.3e-05 Score=60.95 Aligned_cols=71 Identities=15% Similarity=0.136 Sum_probs=51.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
.++|+|+|+ |.+|+.+++.|.+.|++|++.+|++++........+ .... ..+++.++++++|+||.+.+.
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~----~~~~-----~~~~~~~~~~~~Divi~at~~ 90 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE----YEYV-----LINDIDSLIKNNDVIITATSS 90 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT----CEEE-----ECSCHHHHHHTCSEEEECSCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC----CceE-----eecCHHHHhcCCCEEEEeCCC
Confidence 579999997 999999999999999999999998765433222222 2221 123455667889999999875
Q ss_pred c
Q 047628 87 E 87 (327)
Q Consensus 87 ~ 87 (327)
.
T Consensus 91 ~ 91 (144)
T 3oj0_A 91 K 91 (144)
T ss_dssp S
T ss_pred C
Confidence 4
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.52 E-value=6.5e-05 Score=65.29 Aligned_cols=100 Identities=15% Similarity=0.104 Sum_probs=67.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhh---hcc----cCCCCCeeEEeeCCCChhHHHHHhccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRH---LKL----MGDLGQIVPMKFNPRDDNTIKATMAKA 77 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~---~~~----~~~~~~v~~~~~Dl~~~~~~~~~~~~~ 77 (327)
++|+|.|+|| |.+|..++..|...|+ +|++++++++..... +.. .....++.. .. | + ++++++
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-t~---d---~-~al~~a 83 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-EN---N---Y-EYLQNS 83 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-ES---C---G-GGGTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-CC---C---H-HHHCCC
Confidence 3479999999 9999999999999998 999999987654321 111 000011221 11 2 3 467899
Q ss_pred cEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 78 NVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 78 d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
|+||-+++.+.. ....+....|......+.+.+.+..
T Consensus 84 D~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~ 122 (328)
T 2hjr_A 84 DVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYC 122 (328)
T ss_dssp SEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHC
Confidence 999999875432 2223555667888888888887765
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00047 Score=61.19 Aligned_cols=70 Identities=21% Similarity=0.234 Sum_probs=55.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+++++|+|+|+ |.+|+.+++.+.+.|++|++++.++......+. -..+..|..|.+.+.++++.+|+|..
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~a-------d~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVA-------HEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGS-------SEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhC-------CEEEECCCCCHHHHHHHHHhCCccee
Confidence 34579999998 889999999999999999999887654322221 24567899999999999988998854
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=9.3e-05 Score=60.24 Aligned_cols=67 Identities=16% Similarity=0.173 Sum_probs=48.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
++|+|+|+| +|.+|+.+++.|.+.|++|++.+|++++.. .+... ++... ++.++++++|+||.+..
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~-~~~~~----g~~~~--------~~~~~~~~~DvVi~av~ 92 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTA-RLFPS----AAQVT--------FQEEAVSSPEVIFVAVF 92 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHH-HHSBT----TSEEE--------EHHHHTTSCSEEEECSC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHc----CCcee--------cHHHHHhCCCEEEECCC
Confidence 357899999 699999999999999999999999865422 22211 23321 34566789999998876
Q ss_pred c
Q 047628 86 R 86 (327)
Q Consensus 86 ~ 86 (327)
.
T Consensus 93 ~ 93 (215)
T 2vns_A 93 R 93 (215)
T ss_dssp G
T ss_pred h
Confidence 4
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00019 Score=60.97 Aligned_cols=108 Identities=9% Similarity=0.014 Sum_probs=73.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhh---hcc----cCCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRH---LKL----MGDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~---~~~----~~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
|||.|+|+ |.||+.++..|+.++ .++.+++..+...... +.. .. ........+ |. +.++++|
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~--~~~~i~~~~--d~----~~~~~aD 71 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGID--KYPKIVGGA--DY----SLLKGSE 71 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGT--CCCEEEEES--CG----GGGTTCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCC--CCCeEecCC--CH----HHhCCCC
Confidence 78999996 999999999998876 4899998865332111 111 11 012222221 22 3578999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+||-+||.+.. ....+.+..|....+.+.+++.+.++-..++.+|.
T Consensus 72 vVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 72 IIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 99999997543 34568889999999999999999873223444443
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=63.14 Aligned_cols=82 Identities=16% Similarity=0.122 Sum_probs=55.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCC---CchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCE---DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
...++++|+|+ |-+|+.++..|.+.|. +|+++.|+.+ +...................++.+.+.+.+.+.++|+|
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiI 224 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADIL 224 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEE
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEE
Confidence 34689999998 8889999999999997 8999999943 32222111110011233344555554456677889999
Q ss_pred EEccccc
Q 047628 81 INLIGRE 87 (327)
Q Consensus 81 i~~a~~~ 87 (327)
|++.+..
T Consensus 225 INaTp~G 231 (312)
T 3t4e_A 225 TNGTKVG 231 (312)
T ss_dssp EECSSTT
T ss_pred EECCcCC
Confidence 9997653
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=8.2e-05 Score=63.33 Aligned_cols=38 Identities=29% Similarity=0.168 Sum_probs=33.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
+.++|.|+|+ |.+|+.++..|++.|++|++.+|+++..
T Consensus 3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~ 40 (283)
T 4e12_A 3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDAL 40 (283)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence 3478999988 9999999999999999999999987653
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00033 Score=52.56 Aligned_cols=88 Identities=13% Similarity=0.166 Sum_probs=57.9
Q ss_pred cCCcEEEEEcCC---CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 5 YSGIIATVFGTT---GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~Gat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
...++|.|+|+| |.+|..+++.|++.|++|+.++++... +. ++..+ .++.++.+.+|+++
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----i~------G~~~~-------~s~~el~~~vDlvi 74 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----IE------GLKCY-------RSVRELPKDVDVIV 74 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----ET------TEECB-------SSGGGSCTTCCEEE
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----EC------Ceeec-------CCHHHhCCCCCEEE
Confidence 346789999998 899999999999999998887765321 10 12211 12233334689998
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
-+... .....+++.+.+.| ++.++..++
T Consensus 75 i~vp~--------------~~v~~v~~~~~~~g-~~~i~~~~~ 102 (138)
T 1y81_A 75 FVVPP--------------KVGLQVAKEAVEAG-FKKLWFQPG 102 (138)
T ss_dssp ECSCH--------------HHHHHHHHHHHHTT-CCEEEECTT
T ss_pred EEeCH--------------HHHHHHHHHHHHcC-CCEEEEcCc
Confidence 77652 23455666677778 777666554
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00014 Score=63.92 Aligned_cols=74 Identities=23% Similarity=0.279 Sum_probs=52.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~~d~vi 81 (327)
..+|||+||+|-+|..+++.+...|.+|++++|++++.. .....+ ... ..|..+.+ .+.+... ++|+||
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~g----a~~-~~d~~~~~~~~~~~~~~~~~~~D~vi 244 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVLQNG----AHE-VFNHREVNYIDKIKKYVGEKGIDIII 244 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTT----CSE-EEETTSTTHHHHHHHHHCTTCEEEEE
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHHHcC----CCE-EEeCCCchHHHHHHHHcCCCCcEEEE
Confidence 578999999999999999999999999999999865532 233333 111 24555543 3333333 589999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
+++|.
T Consensus 245 ~~~G~ 249 (351)
T 1yb5_A 245 EMLAN 249 (351)
T ss_dssp ESCHH
T ss_pred ECCCh
Confidence 99874
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=6.2e-05 Score=65.49 Aligned_cols=97 Identities=16% Similarity=0.210 Sum_probs=63.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhH---HHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT---IKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~---~~~~~~--~~d~vi 81 (327)
..+|||+||+|.+|..+++.+...|.+|++++|++++.. .....+ ... ..|..+.+. +.+... ++|+||
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~-~~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~D~vi 214 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SALKAG----AWQ-VINYREEDLVERLKEITGGKKVRVVY 214 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHHT----CSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHcC----CCE-EEECCCccHHHHHHHHhCCCCceEEE
Confidence 578999999999999999999999999999999765422 222232 111 235555433 333332 589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++|.. .....++.++..| +++.+++..
T Consensus 215 ~~~g~~--------------~~~~~~~~l~~~G---~iv~~g~~~ 242 (327)
T 1qor_A 215 DSVGRD--------------TWERSLDCLQRRG---LMVSFGNSS 242 (327)
T ss_dssp ECSCGG--------------GHHHHHHTEEEEE---EEEECCCTT
T ss_pred ECCchH--------------HHHHHHHHhcCCC---EEEEEecCC
Confidence 999821 1233444444444 788877653
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.47 E-value=6e-05 Score=63.71 Aligned_cols=76 Identities=18% Similarity=0.264 Sum_probs=51.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++++|+|+ |-+|+.++..|++.|.+|++++|+.++........+....+. ..| .+++.+ .++|+||+++
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~--~~~---~~~~~~--~~~DivVn~t 188 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQ--ALS---MDELEG--HEFDLIINAT 188 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEE--ECC---SGGGTT--CCCSEEEECC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCee--Eec---HHHhcc--CCCCEEEECC
Confidence 44689999999 679999999999999999999998765333222221101121 123 233322 5799999999
Q ss_pred cccc
Q 047628 85 GREY 88 (327)
Q Consensus 85 ~~~~ 88 (327)
+...
T Consensus 189 ~~~~ 192 (271)
T 1nyt_A 189 SSGI 192 (271)
T ss_dssp SCGG
T ss_pred CCCC
Confidence 8654
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00013 Score=62.39 Aligned_cols=77 Identities=16% Similarity=0.108 Sum_probs=55.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+..++++|+|+ |.+|+.++..|++.|. +|++++|+.++........+.. .. +..+.+++.+.+.++|+||++
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~--~~----~~~~~~~~~~~~~~aDivIn~ 211 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDER--RS----AYFSLAEAETRLAEYDIIINT 211 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSS--SC----CEECHHHHHHTGGGCSEEEEC
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhc--cC----ceeeHHHHHhhhccCCEEEEC
Confidence 44689999998 7799999999999997 9999999876543332222210 00 112335677788899999999
Q ss_pred ccccc
Q 047628 84 IGREY 88 (327)
Q Consensus 84 a~~~~ 88 (327)
++...
T Consensus 212 t~~~~ 216 (297)
T 2egg_A 212 TSVGM 216 (297)
T ss_dssp SCTTC
T ss_pred CCCCC
Confidence 87643
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00028 Score=60.97 Aligned_cols=101 Identities=17% Similarity=0.183 Sum_probs=67.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhh---hcccCCC--CCeeEEeeCCCChhHHHHHhcccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRH---LKLMGDL--GQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~---~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
+++||.|+|+ |.+|..++..|+..|. +|++++++++..... +...... ..+++.. | + .++++++|
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~-~--~----~~al~~aD 76 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH-G--D----YDDCRDAD 76 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE-C--C----GGGTTTCS
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc-C--c----HHHhCCCC
Confidence 3579999999 9999999999988774 899999986432211 1110100 1233322 2 2 24578999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
+||-+++.... ....+....|......+++.+.+..
T Consensus 77 vViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~ 114 (316)
T 1ldn_A 77 LVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASG 114 (316)
T ss_dssp EEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHC
Confidence 99999987532 2234566778888888898888876
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=8.2e-05 Score=64.17 Aligned_cols=108 Identities=15% Similarity=0.035 Sum_probs=68.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCCCchhhhcccCCC-----CCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCEDDPRHLKLMGDL-----GQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|||.|+|+ |.+|..++..|... |++|+++++++++........... ....+... ++. .+ ++++|+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~---~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDY---AD-TANSDIV 73 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCG---GG-GTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCH---HH-HCCCCEE
Confidence 58999999 99999999999885 799999999876433211000000 01111111 122 22 6899999
Q ss_pred EEcccccccc--CcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 81 INLIGREYET--RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 81 i~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
|-+++.+... ...+....|......+++.+.+.++-..++.+
T Consensus 74 iiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~ 117 (310)
T 1guz_A 74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV 117 (310)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 9999764322 23456667888888888888877622244444
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.44 E-value=8.5e-05 Score=63.31 Aligned_cols=67 Identities=19% Similarity=0.237 Sum_probs=48.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|+|.|+|+||.+|+.+++.|.+.|++|++.+|+++.... +...+ +. ..+ ..++++++|+||-+...
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~-~~~~g----~~-----~~~---~~~~~~~aDvVi~av~~ 77 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDR-LQGMG----IP-----LTD---GDGWIDEADVVVLALPD 77 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHH-HHHTT----CC-----CCC---SSGGGGTCSEEEECSCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHhcC----CC-----cCC---HHHHhcCCCEEEEcCCc
Confidence 4799999999999999999999999999999987654322 22211 21 112 23456789999988753
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.42 E-value=9.7e-05 Score=64.70 Aligned_cols=97 Identities=14% Similarity=0.143 Sum_probs=64.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~~d~vi 81 (327)
..+|||+|++|-+|..+++.+...|.+|++++|++++.. .....+ ... ..|..+.+ .+.+... ++|+||
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~~g----a~~-~~d~~~~~~~~~~~~~~~~~~~d~vi 240 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLR-RAKALG----ADE-TVNYTHPDWPKEVRRLTGGKGADKVV 240 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHT----CSE-EEETTSTTHHHHHHHHTTTTCEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHhcC----CCE-EEcCCcccHHHHHHHHhCCCCceEEE
Confidence 578999999999999999999999999999999765532 223333 111 24655433 3334332 589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++|. . .....++.++..| +++.+++..
T Consensus 241 ~~~g~-~-------------~~~~~~~~l~~~G---~~v~~g~~~ 268 (343)
T 2eih_A 241 DHTGA-L-------------YFEGVIKATANGG---RIAIAGASS 268 (343)
T ss_dssp ESSCS-S-------------SHHHHHHHEEEEE---EEEESSCCC
T ss_pred ECCCH-H-------------HHHHHHHhhccCC---EEEEEecCC
Confidence 99982 1 1234455555544 788877654
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.0011 Score=56.23 Aligned_cols=105 Identities=13% Similarity=0.148 Sum_probs=68.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc---------------------hhhhcccCCCCCeeEEee
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD---------------------PRHLKLMGDLGQIVPMKF 62 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---------------------~~~~~~~~~~~~v~~~~~ 62 (327)
+...+|+|+|+ |-+|++++..|...|. ++++++++.-.. ...+.......+++.+..
T Consensus 34 L~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 34 IRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred HhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence 34579999999 7789999999999984 788887764110 011112222234566666
Q ss_pred CCCChhHHHHHh-----------ccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 63 NPRDDNTIKATM-----------AKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 63 Dl~~~~~~~~~~-----------~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
++++.+.+.+.+ +++|+||++.- |+..-..+-++|.+.+ + .+|+.+..
T Consensus 113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-------------n~~~R~~in~~c~~~~-~-Pli~~gv~ 171 (292)
T 3h8v_A 113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD-------------NFEARMTINTACNELG-Q-TWMESGVS 171 (292)
T ss_dssp CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-------------SHHHHHHHHHHHHHHT-C-CEEEEEEC
T ss_pred cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc-------------chhhhhHHHHHHHHhC-C-CEEEeeee
Confidence 777666666554 57899998863 2233355777888887 4 56665543
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00013 Score=64.27 Aligned_cols=97 Identities=18% Similarity=0.239 Sum_probs=63.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~~d~vi 81 (327)
..+|||+||+|-+|..+++.+...|.+|++++|++++.. ..+..+ .. ...|..+.+ .+.+... ++|+||
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~g----~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 236 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKLG----AA-AGFNYKKEDFSEATLKFTKGAGVNLIL 236 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHT----CS-EEEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHcC----Cc-EEEecCChHHHHHHHHHhcCCCceEEE
Confidence 578999999999999999999999999999999865532 223333 11 124554433 3333332 589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++|... ....++.++..| +++.++...
T Consensus 237 ~~~G~~~--------------~~~~~~~l~~~G---~iv~~G~~~ 264 (354)
T 2j8z_A 237 DCIGGSY--------------WEKNVNCLALDG---RWVLYGLMG 264 (354)
T ss_dssp ESSCGGG--------------HHHHHHHEEEEE---EEEECCCTT
T ss_pred ECCCchH--------------HHHHHHhccCCC---EEEEEeccC
Confidence 9998421 123344444444 788777543
|
| >3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A* | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00048 Score=61.70 Aligned_cols=71 Identities=17% Similarity=0.229 Sum_probs=55.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|++++|+|+|+ |.+|+.+++++.+.|++|++++ .+......+.. ....+.+|..|.+.+.++++.+|+|+.
T Consensus 22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~~ad-----~~~~~~~~~~d~~~l~~~a~~~d~i~~ 92 (403)
T 3k5i_A 22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQISA-----HDGHVTGSFKEREAVRQLAKTCDVVTA 92 (403)
T ss_dssp CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGGGCC-----SSCCEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHHhcc-----ccceeecCCCCHHHHHHHHHhCCEEEE
Confidence 44679999998 8999999999999999999999 64433222211 124567899999999999999998874
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00084 Score=58.90 Aligned_cols=94 Identities=13% Similarity=0.159 Sum_probs=55.2
Q ss_pred cEEEEEcCCCccHHHHHH-HHHhCC---CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQ-QLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~-~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|+|.|+||||++|+.|++ .|.++. .++..++-+... ..+..+.. ....+ -|..+++. ++++|+||.|
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG--~~~~~~~~-~~~~~--~~~~~~~~----~~~~Dvvf~a 71 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--VPAPNFGK-DAGML--HDAFDIES----LKQLDAVITC 71 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSSTT--SBCCCSSS-CCCBC--EETTCHHH----HTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccccC--cCHHHhCC-CceEE--EecCChhH----hccCCEEEEC
Confidence 589999999999999999 666666 366665432221 11111111 01111 23333333 4789999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEecc
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCL 125 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~ 125 (327)
++.. .+..++..+.+.| .+ .+|=.|+.
T Consensus 72 ~~~~--------------~s~~~~~~~~~~G-~k~~VID~ss~ 99 (370)
T 3pzr_A 72 QGGS--------------YTEKVYPALRQAG-WKGYWIDAAST 99 (370)
T ss_dssp SCHH--------------HHHHHHHHHHHTT-CCCEEEECSST
T ss_pred CChH--------------HHHHHHHHHHHCC-CCEEEEeCCch
Confidence 8742 2345666666777 64 45555543
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0001 Score=64.35 Aligned_cols=99 Identities=15% Similarity=0.222 Sum_probs=63.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhH---HHHHh-ccccEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT---IKATM-AKANVVI 81 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~---~~~~~-~~~d~vi 81 (327)
...+|||+|++|-+|..+++.+...|.+|++++|++++.....+..+ ... ..|..+.+. +.+.. .++|+||
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~d~vi 223 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELG----FDG-AIDYKNEDLAAGLKRECPKGIDVFF 223 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC----CSE-EEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCE-EEECCCHHHHHHHHHhcCCCceEEE
Confidence 35789999999999999999999999999999988765332213333 211 235444332 22222 2589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++|.. .....++.++..| +++.++...
T Consensus 224 ~~~g~~--------------~~~~~~~~l~~~G---~iv~~G~~~ 251 (336)
T 4b7c_A 224 DNVGGE--------------ILDTVLTRIAFKA---RIVLCGAIS 251 (336)
T ss_dssp ESSCHH--------------HHHHHHTTEEEEE---EEEECCCGG
T ss_pred ECCCcc--------------hHHHHHHHHhhCC---EEEEEeecc
Confidence 999741 1223344444444 788777654
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00088 Score=58.92 Aligned_cols=96 Identities=10% Similarity=0.138 Sum_probs=56.9
Q ss_pred CCcEEEEEcCCCccHHHHHH-HHHhCC---CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQ-QLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~-~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
..++|.|+||||++|+.|++ .|.++. .++..++-+... ..+..+.. .... .-|..+++. ++++|+||
T Consensus 3 ~~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~aG--~~~~~~~~-~~~~--v~~~~~~~~----~~~vDvvf 73 (377)
T 3uw3_A 3 GSMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTSNAG--GKAPSFAK-NETT--LKDATSIDD----LKKCDVII 73 (377)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSCTT--SBCCTTCC-SCCB--CEETTCHHH----HHTCSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEechhcC--CCHHHcCC-CceE--EEeCCChhH----hcCCCEEE
Confidence 35799999999999999999 666666 466666433211 11111111 0111 123334443 46899999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEecc
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCL 125 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~ 125 (327)
.|++.. .+..++..+.+.| .+ .+|=.|+.
T Consensus 74 ~a~~~~--------------~s~~~~~~~~~~G-~k~~VID~ss~ 103 (377)
T 3uw3_A 74 TCQGGD--------------YTNDVFPKLRAAG-WNGYWIDAASS 103 (377)
T ss_dssp ECSCHH--------------HHHHHHHHHHHTT-CCSEEEECSST
T ss_pred ECCChH--------------HHHHHHHHHHHCC-CCEEEEeCCcc
Confidence 998742 2355666667777 64 55555543
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0004 Score=59.74 Aligned_cols=107 Identities=13% Similarity=0.101 Sum_probs=71.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCC----CCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD----LGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
|||.|+|+ |.+|..++..|+..+ .++++++++.++.......+.. ..++++. .+ + .++++++|+||
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~----~~a~~~aD~Vi 72 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--S----YGDLEGARAVV 72 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--C----GGGGTTEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--C----HHHhCCCCEEE
Confidence 68999998 999999999998886 6899999875443221111111 0123332 22 2 34588999999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
.+++.... ....+....|......+++.+.+.++-..++.+
T Consensus 73 i~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~ 115 (310)
T 2xxj_A 73 LAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVA 115 (310)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEe
Confidence 99987533 223456677888889999998888632244444
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00026 Score=61.82 Aligned_cols=74 Identities=15% Similarity=0.162 Sum_probs=52.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hHHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NTIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--~~d~vi 81 (327)
..+|||+|++|-+|...++.+...|.+|+++++++++.. .+...+ ... ..|..+. +.+.+... ++|+||
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lg----a~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi 218 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE-ELLRLG----AAY-VIDTSTAPLYETVMELTNGIGADAAI 218 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHHHT----CSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhCC----CcE-EEeCCcccHHHHHHHHhCCCCCcEEE
Confidence 578999999999999999988888999999999887643 333333 111 1244333 23333332 589999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
+|+|.
T Consensus 219 d~~g~ 223 (340)
T 3gms_A 219 DSIGG 223 (340)
T ss_dssp ESSCH
T ss_pred ECCCC
Confidence 99985
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00019 Score=64.97 Aligned_cols=35 Identities=20% Similarity=0.362 Sum_probs=31.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
|+|.|+|+ |.+|..++..|.+.|++|++++|++++
T Consensus 1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~~~ 35 (436)
T 1mv8_A 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTK 35 (436)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 58999985 999999999999999999999998655
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00055 Score=61.64 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=64.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCC--Ch-hHHHHHhccccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR--DD-NTIKATMAKANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~--~~-~~~~~~~~~~d~ 79 (327)
+++|+|+|+ |-||+.+++.|+++ ++ +|++++...... ...... ++.+...+++ |. +.+.+++++.|+
T Consensus 13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~~----g~~~~~~~Vdadnv~~~l~aLl~~~Dv 86 (480)
T 2ph5_A 13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQY----GVSFKLQQITPQNYLEVIGSTLEENDF 86 (480)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHHH----TCEEEECCCCTTTHHHHTGGGCCTTCE
T ss_pred CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhhc----CCceeEEeccchhHHHHHHHHhcCCCE
Confidence 478999996 99999999999886 44 688887665442 212222 2455555554 44 335567777799
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
||+++... ....++++|.++| + -|+++..
T Consensus 87 VIN~s~~~--------------~~l~Im~acleaG-v---~YlDTa~ 115 (480)
T 2ph5_A 87 LIDVSIGI--------------SSLALIILCNQKG-A---LYINAAT 115 (480)
T ss_dssp EEECCSSS--------------CHHHHHHHHHHHT-C---EEEESSC
T ss_pred EEECCccc--------------cCHHHHHHHHHcC-C---CEEECCC
Confidence 99976432 1357999999999 6 4556654
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00022 Score=58.22 Aligned_cols=69 Identities=16% Similarity=0.165 Sum_probs=48.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEE-eeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLV-PFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~-~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|++|+|.|+| +|.+|..+++.|.+.|++|++ .+|++++........+ +.... | +. +.++++|+||-+
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g----~~~~~-~--~~----~~~~~aDvVila 88 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG----ASVKA-V--EL----KDALQADVVILA 88 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT----TTEEE-C--CH----HHHTTSSEEEEE
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC----CCccc-C--hH----HHHhcCCEEEEe
Confidence 4568999999 599999999999999999999 8888766433222222 11111 1 22 235789999988
Q ss_pred cc
Q 047628 84 IG 85 (327)
Q Consensus 84 a~ 85 (327)
..
T Consensus 89 vp 90 (220)
T 4huj_A 89 VP 90 (220)
T ss_dssp SC
T ss_pred CC
Confidence 64
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00014 Score=63.75 Aligned_cols=97 Identities=13% Similarity=0.098 Sum_probs=57.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCC------CC----CeeEEeeCCCChhHHHHHh
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGD------LG----QIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~------~~----~v~~~~~Dl~~~~~~~~~~ 74 (327)
++++|.|+||||++|..+++.|.++. .++..+....+. -..+..... .+ ++.+.. .+++. +
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~sa-Gk~~~~~~p~~~~~~~~~~~~~~~v~~---~~~~~----~ 77 (359)
T 4dpl_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSV-GKPYGEVVRWQTVGQVPKEIADMEIKP---TDPKL----M 77 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTT-TSBHHHHCCCCSSSCCCHHHHTCBCEE---CCGGG----C
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhc-CCChhHhcccccccccccccccceEEe---CCHHH----h
Confidence 35799999999999999999877765 467666433321 111111000 00 111111 12332 4
Q ss_pred ccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 75 AKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 75 ~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.++|+||.|.+... +..++..+.+.| . ++|=.|+..
T Consensus 78 ~~vDvvf~a~p~~~--------------s~~~a~~~~~~G-~-~vIDlSa~~ 113 (359)
T 4dpl_A 78 DDVDIIFSPLPQGA--------------AGPVEEQFAKEG-F-PVISNSPDH 113 (359)
T ss_dssp TTCCEEEECCCTTT--------------HHHHHHHHHHTT-C-EEEECSSTT
T ss_pred cCCCEEEECCChHH--------------HHHHHHHHHHCC-C-EEEEcCCCc
Confidence 68999999986521 245666667778 4 677777754
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00014 Score=63.75 Aligned_cols=97 Identities=13% Similarity=0.098 Sum_probs=57.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCC------CC----CeeEEeeCCCChhHHHHHh
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGD------LG----QIVPMKFNPRDDNTIKATM 74 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~------~~----~v~~~~~Dl~~~~~~~~~~ 74 (327)
++++|.|+||||++|..+++.|.++. .++..+....+. -..+..... .+ ++.+.. .+++. +
T Consensus 6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~sa-Gk~~~~~~p~~~~~~~~~~~~~~~v~~---~~~~~----~ 77 (359)
T 4dpk_A 6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSV-GKPYGEVVRWQTVGQVPKEIADMEIKP---TDPKL----M 77 (359)
T ss_dssp CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTT-TSBHHHHCCCCSSSCCCHHHHTCBCEE---CCGGG----C
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhc-CCChhHhcccccccccccccccceEEe---CCHHH----h
Confidence 35799999999999999999877765 467666433321 111111000 00 111111 12332 4
Q ss_pred ccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 75 AKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 75 ~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.++|+||.|.+... +..++..+.+.| . ++|=.|+..
T Consensus 78 ~~vDvvf~a~p~~~--------------s~~~a~~~~~~G-~-~vIDlSa~~ 113 (359)
T 4dpk_A 78 DDVDIIFSPLPQGA--------------AGPVEEQFAKEG-F-PVISNSPDH 113 (359)
T ss_dssp TTCCEEEECCCTTT--------------HHHHHHHHHHTT-C-EEEECSSTT
T ss_pred cCCCEEEECCChHH--------------HHHHHHHHHHCC-C-EEEEcCCCc
Confidence 68999999986521 245666667778 4 677777754
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0002 Score=61.57 Aligned_cols=69 Identities=22% Similarity=0.220 Sum_probs=50.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
.++|+|.|+|. |.+|..+++.|++.|++|++.+|++++... +...+ +.. .+++.++++++|+||-+.
T Consensus 7 ~~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~-~~~~g----~~~-------~~~~~e~~~~aDvVi~~v 73 (306)
T 3l6d_A 7 SFEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAA-LVAAG----AHL-------CESVKAALSASPATIFVL 73 (306)
T ss_dssp CCSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHH-HHHHT----CEE-------CSSHHHHHHHSSEEEECC
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHCC----Cee-------cCCHHHHHhcCCEEEEEe
Confidence 34678999986 999999999999999999999998765332 22211 221 134556677899999887
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
..
T Consensus 74 p~ 75 (306)
T 3l6d_A 74 LD 75 (306)
T ss_dssp SS
T ss_pred CC
Confidence 53
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00056 Score=59.05 Aligned_cols=110 Identities=12% Similarity=-0.087 Sum_probs=73.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhh---hcccCCC-CCeeEE-eeCCCChhHHHHHhcccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRH---LKLMGDL-GQIVPM-KFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~---~~~~~~~-~~v~~~-~~Dl~~~~~~~~~~~~~d 78 (327)
..+||.|+|+ |.+|..++..|+..|. +|.+++++.+..... +...... ...... ..|+ + .++++|
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~---~----~~~daD 91 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDY---S----VSAGSK 91 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSS---C----SCSSCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCH---H----HhCCCC
Confidence 3579999999 9999999999999886 899999875432211 1110000 111222 2232 2 278999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+||-++|.... ....+....|....+.+++.+.+.++-..++.+|
T Consensus 92 iVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvt 138 (330)
T 3ldh_A 92 LVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHP 138 (330)
T ss_dssp EEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred EEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence 99999987543 3345788889999999999998886322444444
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00017 Score=60.73 Aligned_cols=73 Identities=16% Similarity=0.100 Sum_probs=48.8
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
...+++|+|.|+|+ |.+|+.+++.|.+.|++ |.+.+|++++........+ +.. .. + +.++++++|+|
T Consensus 5 ~~~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g----~~~-~~---~---~~~~~~~~Dvv 72 (266)
T 3d1l_A 5 KRSIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVE----AEY-TT---D---LAEVNPYAKLY 72 (266)
T ss_dssp --CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT----CEE-ES---C---GGGSCSCCSEE
T ss_pred hcCCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC----Cce-eC---C---HHHHhcCCCEE
Confidence 34444579999998 99999999999999998 8888887655322211111 222 11 2 23456789999
Q ss_pred EEcccc
Q 047628 81 INLIGR 86 (327)
Q Consensus 81 i~~a~~ 86 (327)
|-+...
T Consensus 73 i~av~~ 78 (266)
T 3d1l_A 73 IVSLKD 78 (266)
T ss_dssp EECCCH
T ss_pred EEecCH
Confidence 988753
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00012 Score=63.27 Aligned_cols=99 Identities=15% Similarity=0.058 Sum_probs=64.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhh---ccc----CCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHL---KLM----GDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~---~~~----~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
+|+|.|+|+ |.+|..++..|+..|+ +|++++++++...... ... ....++.. .. + + ++++++|
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~---d---~-~a~~~aD 74 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-TD---D---Y-ADISGSD 74 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ES---C---G-GGGTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-CC---C---H-HHhCCCC
Confidence 478999999 9999999999999998 9999999875433211 000 00011211 11 2 2 4678999
Q ss_pred EEEEcccccccc--CcchhHhhhhHHHHHHHHHHHHcC
Q 047628 79 VVINLIGREYET--RNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 79 ~vi~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
+||-+++..... ...+....|....+.+++.+.+..
T Consensus 75 iVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~ 112 (317)
T 2ewd_A 75 VVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYC 112 (317)
T ss_dssp EEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHC
Confidence 999999764321 223444556677778888777765
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00012 Score=63.16 Aligned_cols=74 Identities=14% Similarity=0.162 Sum_probs=48.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEE--------eeCCCChhHHHHHhcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPM--------KFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~--------~~Dl~~~~~~~~~~~~~d 78 (327)
+|+|+|+|+ |.+|+.++..|.+.|++|++++|+++.... +...+ +... ..+..+.+++.++++++|
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 76 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEA-IRKNG----LIADFNGEEVVANLPIFSPEEIDHQNEQVD 76 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHC----EEEEETTEEEEECCCEECGGGCCTTSCCCS
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HHhCC----EEEEeCCCeeEecceeecchhhcccCCCCC
Confidence 479999998 999999999999999999999998654322 22111 2111 111123333333455899
Q ss_pred EEEEcccc
Q 047628 79 VVINLIGR 86 (327)
Q Consensus 79 ~vi~~a~~ 86 (327)
+||-+...
T Consensus 77 ~vi~~v~~ 84 (316)
T 2ew2_A 77 LIIALTKA 84 (316)
T ss_dssp EEEECSCH
T ss_pred EEEEEecc
Confidence 99988753
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=97.31 E-value=0.0016 Score=55.34 Aligned_cols=88 Identities=20% Similarity=0.193 Sum_probs=59.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEE-EeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVL-VPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~-~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~ 83 (327)
.++|+|.|+||..|+.+++.+++.|++++ .+.+...... . .++..+ .++.++.+ ++|+++.+
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~VnP~~~g~~--i------~G~~vy-------~sl~el~~~~~~Dv~Ii~ 71 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGME--V------LGVPVY-------DTVKEAVAHHEVDASIIF 71 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE--E------TTEEEE-------SSHHHHHHHSCCSEEEEC
T ss_pred CCEEEEECCCCCHHHHHHHHHHHcCCeEEEEECCCCCCce--E------CCEEee-------CCHHHHhhcCCCCEEEEe
Confidence 57899999999999999999999899855 4443321110 0 023322 23444455 79999988
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
... ..+..+++.|.+.| ++.+|.+++
T Consensus 72 vp~--------------~~~~~~~~ea~~~G-i~~vVi~t~ 97 (288)
T 1oi7_A 72 VPA--------------PAAADAALEAAHAG-IPLIVLITE 97 (288)
T ss_dssp CCH--------------HHHHHHHHHHHHTT-CSEEEECCS
T ss_pred cCH--------------HHHHHHHHHHHHCC-CCEEEEECC
Confidence 654 34567888888888 876666554
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00055 Score=60.01 Aligned_cols=96 Identities=17% Similarity=0.229 Sum_probs=63.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHh--ccccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATM--AKANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~--~~~d~vi~ 82 (327)
.+++|+||+|-+|...++.+...|.+|+++++++++. ..+..++ ... ..|..+.+ .+.+.. .++|+||+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~~G----a~~-~~~~~~~~~~~~v~~~~~~~g~D~vid 239 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQI-ALLKDIG----AAH-VLNEKAPDFEATLREVMKAEQPRIFLD 239 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGH-HHHHHHT----CSE-EEETTSTTHHHHHHHHHHHHCCCEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHcC----CCE-EEECCcHHHHHHHHHHhcCCCCcEEEE
Confidence 6899999999999999998888899999999887663 3333343 111 12433332 333333 26999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
|+|.. .....++.++..| +++.++...
T Consensus 240 ~~g~~--------------~~~~~~~~l~~~G---~iv~~G~~~ 266 (349)
T 3pi7_A 240 AVTGP--------------LASAIFNAMPKRA---RWIIYGRLD 266 (349)
T ss_dssp SSCHH--------------HHHHHHHHSCTTC---EEEECCCSC
T ss_pred CCCCh--------------hHHHHHhhhcCCC---EEEEEeccC
Confidence 98742 1234455555555 788877544
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00014 Score=63.61 Aligned_cols=75 Identities=20% Similarity=0.241 Sum_probs=51.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh----HHHHHh-ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN----TIKATM-AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~----~~~~~~-~~~d~vi 81 (327)
..+|||+|++|-+|..+++.+...|.+|++++|++++........+ ... ..|..+.+ .+.+.. .++|+||
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g----~~~-~~d~~~~~~~~~~~~~~~~~~~d~vi 230 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFG----FDD-AFNYKEESDLTAALKRCFPNGIDIYF 230 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSC----CSE-EEETTSCSCSHHHHHHHCTTCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----Cce-EEecCCHHHHHHHHHHHhCCCCcEEE
Confidence 5789999999999999999999999999999987654322111233 111 23554432 233322 2589999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
+++|.
T Consensus 231 ~~~g~ 235 (345)
T 2j3h_A 231 ENVGG 235 (345)
T ss_dssp ESSCH
T ss_pred ECCCH
Confidence 99873
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.28 E-value=6.3e-05 Score=63.85 Aligned_cols=78 Identities=17% Similarity=0.160 Sum_probs=54.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCC-CCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGD-LGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
...++++|+|+ |-+|+.++..|.+.|. +|++++|+.++.......... .+.+.+...++ +++.+.+.++|+||+
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~~DiVIn 200 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAAADGVVN 200 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHHSSEEEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhcCCEEEE
Confidence 44689999998 8899999999999997 799999987664332221110 01223333333 456667788999999
Q ss_pred cccc
Q 047628 83 LIGR 86 (327)
Q Consensus 83 ~a~~ 86 (327)
+.+.
T Consensus 201 aTp~ 204 (283)
T 3jyo_A 201 ATPM 204 (283)
T ss_dssp CSST
T ss_pred CCCC
Confidence 9865
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00063 Score=58.09 Aligned_cols=36 Identities=28% Similarity=0.303 Sum_probs=31.1
Q ss_pred CcE-EEEE-cCC-----------------CccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 7 GII-ATVF-GTT-----------------GFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 7 ~~~-ilI~-Gat-----------------G~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
.++ |||| |+| |..|.+++++++++|++|+.+.|..+
T Consensus 36 gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 36 GRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp TCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 455 8888 666 99999999999999999999998654
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00029 Score=62.16 Aligned_cols=98 Identities=21% Similarity=0.273 Sum_probs=63.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHh-ccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATM-AKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~-~~~d~vi~ 82 (327)
..+|||+||+|.+|..+++.+...|.+|++++|++++. ..+...+ ... ..|..+.+ .+.+.. .++|+||+
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~-~~~~~~G----a~~-~~~~~~~~~~~~~~~~~~~g~D~vid 237 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS-AFLKSLG----CDR-PINYKTEPVGTVLKQEYPEGVDVVYE 237 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTT----CSE-EEETTTSCHHHHHHHHCTTCEEEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHcC----CcE-EEecCChhHHHHHHHhcCCCCCEEEE
Confidence 46899999999999999999999999999999876542 2233333 221 12433322 222222 25899999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
++|. ......++.++..| +++.+++...
T Consensus 238 ~~g~--------------~~~~~~~~~l~~~G---~iv~~g~~~~ 265 (362)
T 2c0c_A 238 SVGG--------------AMFDLAVDALATKG---RLIVIGFISG 265 (362)
T ss_dssp CSCT--------------HHHHHHHHHEEEEE---EEEECCCGGG
T ss_pred CCCH--------------HHHHHHHHHHhcCC---EEEEEeCCCC
Confidence 9873 12234555555544 7888877543
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00025 Score=61.82 Aligned_cols=97 Identities=16% Similarity=0.181 Sum_probs=63.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hHHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NTIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--~~d~vi 81 (327)
..+|||+||+|-+|...++.+...|.+|++++|++++.. .....+ ... ..|..+. +.+.+... ++|+||
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~g----a~~-~~~~~~~~~~~~~~~~~~~~g~D~vi 222 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAKEYG----AEY-LINASKEDILRQVLKFTNGKGVDASF 222 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHTT----CSE-EEETTTSCHHHHHHHHTTTSCEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcC----CcE-EEeCCCchHHHHHHHHhCCCCceEEE
Confidence 578999999999999999999999999999999765532 333333 111 2243333 33344332 589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++|.. .....++.++..| +++.++...
T Consensus 223 d~~g~~--------------~~~~~~~~l~~~G---~iv~~G~~~ 250 (334)
T 3qwb_A 223 DSVGKD--------------TFEISLAALKRKG---VFVSFGNAS 250 (334)
T ss_dssp ECCGGG--------------GHHHHHHHEEEEE---EEEECCCTT
T ss_pred ECCChH--------------HHHHHHHHhccCC---EEEEEcCCC
Confidence 999841 1233455555544 788776543
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00041 Score=63.13 Aligned_cols=36 Identities=22% Similarity=0.168 Sum_probs=33.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhC-CC-EEEEeeCCCC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKM-GS-QVLVPFRGCE 42 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~-g~-~V~~~~R~~~ 42 (327)
+.|+|.|+|+ |++|..++..|++. |+ +|++++|+++
T Consensus 17 ~~mkIaVIGl-G~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGM-GYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECC-STTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 3579999998 99999999999999 99 9999999987
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00022 Score=62.89 Aligned_cols=77 Identities=16% Similarity=0.162 Sum_probs=55.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
..++|+|+|+ |-+|+.+++.|...|.+|++++|++++... +...+. ..+. .+..+.+++.+.+.++|+||++++
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~-~~~~~~-~~~~---~~~~~~~~~~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSY-LETLFG-SRVE---LLYSNSAEIETAVAEADLLIGAVL 239 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHG-GGSE---EEECCHHHHHHHHHTCSEEEECCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHhhC-ceeE---eeeCCHHHHHHHHcCCCEEEECCC
Confidence 3479999999 999999999999999999999998765322 221110 0121 122345677778889999999987
Q ss_pred ccc
Q 047628 86 REY 88 (327)
Q Consensus 86 ~~~ 88 (327)
...
T Consensus 240 ~~~ 242 (361)
T 1pjc_A 240 VPG 242 (361)
T ss_dssp CTT
T ss_pred cCC
Confidence 643
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00011 Score=63.28 Aligned_cols=74 Identities=11% Similarity=0.075 Sum_probs=48.3
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|++..++|+|.|+|. |.+|..+++.|.+.|++|++.+|++++... +...+ ...... ++.++++++|+|
T Consensus 1 M~~~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~-~~~~g----~~~~~~------~~~e~~~~aDvv 68 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNPQACAN-LLAEG----ACGAAA------SAREFAGVVDAL 68 (303)
T ss_dssp ------CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTT----CSEEES------SSTTTTTTCSEE
T ss_pred CCCCCCCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH-HHHcC----CccccC------CHHHHHhcCCEE
Confidence 455556689999987 999999999999999999999998765322 22221 221111 233456778999
Q ss_pred EEcccc
Q 047628 81 INLIGR 86 (327)
Q Consensus 81 i~~a~~ 86 (327)
|-+...
T Consensus 69 i~~vp~ 74 (303)
T 3g0o_A 69 VILVVN 74 (303)
T ss_dssp EECCSS
T ss_pred EEECCC
Confidence 988753
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0013 Score=54.66 Aligned_cols=104 Identities=17% Similarity=0.185 Sum_probs=65.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCch----------------------hhhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDP----------------------RHLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~----------------------~~~~~~~~~~~v~~~~~ 62 (327)
...+|+|+|+ |-+|+++++.|...|. ++++++++.-... ..+.......+++.+..
T Consensus 27 ~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 105 (251)
T 1zud_1 27 LDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 105 (251)
T ss_dssp HTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred hcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 4579999999 5589999999999995 7888766532110 00111111112344444
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
++ +.+.+.+.++++|+||.+... ...-..+.++|.+.+ + .+|..+..+
T Consensus 106 ~~-~~~~~~~~~~~~DvVi~~~d~-------------~~~r~~l~~~~~~~~-~-p~i~~~~~g 153 (251)
T 1zud_1 106 RL-TGEALKDAVARADVVLDCTDN-------------MATRQEINAACVALN-T-PLITASAVG 153 (251)
T ss_dssp CC-CHHHHHHHHHHCSEEEECCSS-------------HHHHHHHHHHHHHTT-C-CEEEEEEEB
T ss_pred cC-CHHHHHHHHhcCCEEEECCCC-------------HHHHHHHHHHHHHhC-C-CEEEEeccc
Confidence 44 446677888899999988642 122345677788877 4 577666543
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00034 Score=60.90 Aligned_cols=97 Identities=14% Similarity=0.232 Sum_probs=63.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHh--ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATM--AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~--~~~d~vi 81 (327)
..+|||+||+|.+|..+++.+...|.+|++++|++++.. .+...+ .. ...|..+.+ .+.+.. .++|+||
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~-~~~~~g----~~-~~~d~~~~~~~~~i~~~~~~~~~d~vi 219 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAE-TARKLG----CH-HTINYSTQDFAEVVREITGGKGVDVVY 219 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHT----CS-EEEETTTSCHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcC----CC-EEEECCCHHHHHHHHHHhCCCCCeEEE
Confidence 578999999999999999999999999999999865422 223333 11 123555433 333333 2589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++|.. .....++.++..| +++.++...
T Consensus 220 ~~~g~~--------------~~~~~~~~l~~~G---~iv~~g~~~ 247 (333)
T 1wly_A 220 DSIGKD--------------TLQKSLDCLRPRG---MCAAYGHAS 247 (333)
T ss_dssp ECSCTT--------------THHHHHHTEEEEE---EEEECCCTT
T ss_pred ECCcHH--------------HHHHHHHhhccCC---EEEEEecCC
Confidence 999841 1123444444444 778777643
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0012 Score=59.98 Aligned_cols=97 Identities=15% Similarity=0.213 Sum_probs=70.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
.++|+|.|| |.+|.++++.| +.+++|.++.++.++.......+ ++..++.+|-+|++-|.++ ++++|+++-+.+
T Consensus 235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l---~~~~Vi~GD~td~~~L~ee~i~~~D~~ia~T~ 309 (461)
T 4g65_A 235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL---ENTIVFCGDAADQELLTEENIDQVDVFIALTN 309 (461)
T ss_dssp CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC---TTSEEEESCTTCHHHHHHTTGGGCSEEEECCS
T ss_pred ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC---CCceEEeccccchhhHhhcCchhhcEEEEccc
Confidence 468999998 99999999987 55699999988876643333322 4688999999999988875 678999997764
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
.. +.|+. ..-.|++.| +++.|-.
T Consensus 310 ~D---------e~Ni~----~~llAk~~g-v~kvIa~ 332 (461)
T 4g65_A 310 ED---------ETNIM----SAMLAKRMG-AKKVMVL 332 (461)
T ss_dssp CH---------HHHHH----HHHHHHHTT-CSEEEEE
T ss_pred Cc---------HHHHH----HHHHHHHcC-Ccccccc
Confidence 31 33432 233467788 8877643
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00018 Score=63.23 Aligned_cols=74 Identities=20% Similarity=0.321 Sum_probs=51.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHh-ccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATM-AKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~-~~~d~vi~ 82 (327)
..+|||+||+|-+|..+++.+...|.+|++++|++++.. .....+ ... ..|..+.+ .+.+.. .++|+||+
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lG----a~~-~~~~~~~~~~~~~~~~~~~g~Dvvid 241 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCE-ACERLG----AKR-GINYRSEDFAAVIKAETGQGVDIILD 241 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHT----CSE-EEETTTSCHHHHHHHHHSSCEEEEEE
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHhcC----CCE-EEeCCchHHHHHHHHHhCCCceEEEE
Confidence 578999999999999999999999999999999876532 233333 111 13444432 233322 25899999
Q ss_pred cccc
Q 047628 83 LIGR 86 (327)
Q Consensus 83 ~a~~ 86 (327)
++|.
T Consensus 242 ~~g~ 245 (353)
T 4dup_A 242 MIGA 245 (353)
T ss_dssp SCCG
T ss_pred CCCH
Confidence 9984
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.22 E-value=0.00063 Score=58.27 Aligned_cols=55 Identities=22% Similarity=0.164 Sum_probs=43.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+++|.|+||.|.+|..++..|.+.|++|++++|++.. +..++++++|+||-+...
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~-------------------------~~~~~~~~aDvVilavp~ 75 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA-------------------------VAESILANADVVIVSVPI 75 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG-------------------------GHHHHHTTCSEEEECSCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc-------------------------CHHHHhcCCCEEEEeCCH
Confidence 4689999988999999999999999999999876431 234456778888877643
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00067 Score=58.74 Aligned_cols=67 Identities=19% Similarity=0.254 Sum_probs=49.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
++|+|.|+|. |.+|..+++.|++.|++|++.+|++++... +... ++.. ..++.++++++|+||-+..
T Consensus 30 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~-l~~~----g~~~-------~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 30 YARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAAS-LAAL----GATI-------HEQARAAARDADIVVSMLE 96 (320)
T ss_dssp CCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHTT----TCEE-------ESSHHHHHTTCSEEEECCS
T ss_pred CCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHH-HHHC----CCEe-------eCCHHHHHhcCCEEEEECC
Confidence 3579999988 999999999999999999999998765322 2211 1222 1345667788999998875
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00097 Score=57.39 Aligned_cols=99 Identities=18% Similarity=0.094 Sum_probs=64.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccC-----CCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMG-----DLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~-----~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|+|.|+| .|.+|..++..|++.| ++|++++|+++.......... ....+..... +. +.++++|+|
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~----~~~~~aDvV 73 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DW----AALADADVV 73 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CG----GGGTTCSEE
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---CH----HHhCCCCEE
Confidence 6899999 5999999999999998 899999998654322111100 0011222222 22 357889999
Q ss_pred EEccccccc------cCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 81 INLIGREYE------TRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 81 i~~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
|-+++.... ....+....|......+++.+.+..
T Consensus 74 iiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~ 113 (309)
T 1hyh_A 74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG 113 (309)
T ss_dssp EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT
T ss_pred EEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999876431 1234556677777888888887765
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0012 Score=56.38 Aligned_cols=65 Identities=12% Similarity=0.048 Sum_probs=49.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+|+|.|+|. |.+|..+++.|++.|++|++.+|++++.... ... +++. .+++.++++ +|+||-+..
T Consensus 15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~-~~~----g~~~-------~~~~~~~~~-aDvvi~~vp 79 (296)
T 3qha_A 15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPL-AEA----GATL-------ADSVADVAA-ADLIHITVL 79 (296)
T ss_dssp CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHH-HHT----TCEE-------CSSHHHHTT-SSEEEECCS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHC----CCEE-------cCCHHHHHh-CCEEEEECC
Confidence 468999996 9999999999999999999999998875432 221 2222 124556677 999998875
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00031 Score=58.38 Aligned_cols=39 Identities=31% Similarity=0.543 Sum_probs=33.0
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.+.+|+|.|+|+ |.+|+.+++.|++.|++|++.+|++++
T Consensus 16 ~~~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 16 YFQGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp ---CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred ccCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 355789999985 999999999999999999999998654
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0011 Score=50.08 Aligned_cols=85 Identities=12% Similarity=-0.038 Sum_probs=56.2
Q ss_pred CcEEEEEcCC---CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTT---GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~Gat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
.++|+|+|++ |.+|..+++.|++.|++|+.+... .. .+. ++..+ .++.++...+|.++-+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~--~~--~i~------G~~~y-------~sl~~l~~~vDlvvi~ 84 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPK--YE--EVL------GRKCY-------PSVLDIPDKIEVVDLF 84 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT--CS--EET------TEECB-------SSGGGCSSCCSEEEEC
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCC--CC--eEC------Ceecc-------CCHHHcCCCCCEEEEE
Confidence 5789999998 899999999999999997776433 21 110 12221 1222233468988877
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
... .....+++.|.+.| ++.+++.+
T Consensus 85 vp~--------------~~~~~vv~~~~~~g-i~~i~~~~ 109 (144)
T 2d59_A 85 VKP--------------KLTMEYVEQAIKKG-AKVVWFQY 109 (144)
T ss_dssp SCH--------------HHHHHHHHHHHHHT-CSEEEECT
T ss_pred eCH--------------HHHHHHHHHHHHcC-CCEEEECC
Confidence 643 33456778888888 87776543
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0037 Score=53.39 Aligned_cols=66 Identities=17% Similarity=0.276 Sum_probs=40.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
++||.++|- |..|..+++.|++.||+|++.+|++++... +...+ .... ++..++++.+|+||-|..
T Consensus 5 s~kIgfIGL-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~-l~~~G----~~~~-------~s~~e~~~~~dvvi~~l~ 70 (297)
T 4gbj_A 5 SEKIAFLGL-GNLGTPIAEILLEAGYELVVWNRTASKAEP-LTKLG----ATVV-------ENAIDAITPGGIVFSVLA 70 (297)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEC-------CT-TTTTT----CEEC-------SSGGGGCCTTCEEEECCS
T ss_pred CCcEEEEec-HHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHcC----CeEe-------CCHHHHHhcCCceeeecc
Confidence 468999987 999999999999999999999999877433 22221 2211 233445566777776654
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00036 Score=61.84 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=55.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++|+|+|+ |-+|+.+++.+...|.+|++++|++++........+ ..+ ..+..+.+++.+.+.++|+||.++
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g--~~~---~~~~~~~~~l~~~l~~aDvVi~~~ 239 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC--GRI---HTRYSSAYELEGAVKRADLVIGAV 239 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT--TSS---EEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC--Cee---EeccCCHHHHHHHHcCCCEEEECC
Confidence 34689999999 999999999999999999999998655322111122 111 223345667888888999999988
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+..
T Consensus 240 ~~p 242 (377)
T 2vhw_A 240 LVP 242 (377)
T ss_dssp CCT
T ss_pred CcC
Confidence 754
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00041 Score=60.97 Aligned_cols=77 Identities=19% Similarity=0.185 Sum_probs=49.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEe------eCCC-ChhHHHHHhccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMK------FNPR-DDNTIKATMAKA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~------~Dl~-~~~~~~~~~~~~ 77 (327)
|++|+|+|+|+ |.+|..++..|.+.|++|++++|+++.... +...+ .+.... ..+. ..+++.++++++
T Consensus 2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (359)
T 1bg6_A 2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKE-IQDRG---AIIAEGPGLAGTAHPDLLTSDIGLAVKDA 76 (359)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHT---SEEEESSSCCEEECCSEEESCHHHHHTTC
T ss_pred CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHhcC---CeEEeccccccccccceecCCHHHHHhcC
Confidence 34579999998 999999999999999999999998654322 22111 111100 0110 112345567789
Q ss_pred cEEEEcccc
Q 047628 78 NVVINLIGR 86 (327)
Q Consensus 78 d~vi~~a~~ 86 (327)
|+||-+...
T Consensus 77 D~vi~~v~~ 85 (359)
T 1bg6_A 77 DVILIVVPA 85 (359)
T ss_dssp SEEEECSCG
T ss_pred CEEEEeCCc
Confidence 999988754
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0032 Score=55.17 Aligned_cols=114 Identities=9% Similarity=0.067 Sum_probs=70.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-----EEEEeeCCCCCchhhhc----ccC--CCCCeeEEeeCCCChhHHHHHhc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-----QVLVPFRGCEDDPRHLK----LMG--DLGQIVPMKFNPRDDNTIKATMA 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-----~V~~~~R~~~~~~~~~~----~~~--~~~~v~~~~~Dl~~~~~~~~~~~ 75 (327)
++||.|+||+|.||++++-.|+..+. ++.+..-+.......++ .+. ..+-...+.. .. .-.+.++
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~~--~~y~~~~ 107 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--GI--DPYEVFE 107 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--ES--CHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE--ec--CCHHHhC
Confidence 57999999999999999999988752 25554333222111111 111 1111111111 11 2356789
Q ss_pred cccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHc-CCcceEEEEec
Q 047628 76 KANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEH-GGIMRFIQISC 124 (327)
Q Consensus 76 ~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~-~~v~~~v~~Ss 124 (327)
++|+||-++|.... .+..+....|....+.+.+++.+. ++-..++.+|.
T Consensus 108 daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 108 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 99999999987532 344678899999999999999875 42235555554
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00054 Score=60.15 Aligned_cols=79 Identities=14% Similarity=0.095 Sum_probs=50.5
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC----CCCeeEEeeCCCChhHHHHHhccccE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD----LGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
.+++|+|.|+|+ |.+|..++..|.+.|++|++.+|+++... .+...+. .+++.. ...+.-..++.++++++|+
T Consensus 26 ~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~~~~~-~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 26 EPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYESDHVD-EMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp -CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCHHHHH-HHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCE
T ss_pred cccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCE
Confidence 344579999998 99999999999999999999999865422 2221110 011110 0001111245667789999
Q ss_pred EEEccc
Q 047628 80 VINLIG 85 (327)
Q Consensus 80 vi~~a~ 85 (327)
||-+..
T Consensus 103 VilaVp 108 (356)
T 3k96_A 103 ILIVVP 108 (356)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 998764
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00036 Score=58.90 Aligned_cols=70 Identities=13% Similarity=0.139 Sum_probs=51.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++++|+|+ |-+|+.++..|.+.|. +|++++|+.++...... ++... ..+++.+++.++|+||++
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~------~~~~~-----~~~~~~~~~~~aDiVIna 182 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSL------NINKI-----NLSHAESHLDEFDIIINT 182 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS------CCEEE-----CHHHHHHTGGGCSEEEEC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH------hcccc-----cHhhHHHHhcCCCEEEEC
Confidence 34678999998 7889999999999998 89999999766332211 12221 345677778899999999
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
.+.
T Consensus 183 Tp~ 185 (277)
T 3don_A 183 TPA 185 (277)
T ss_dssp CC-
T ss_pred ccC
Confidence 765
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00044 Score=59.99 Aligned_cols=93 Identities=17% Similarity=0.174 Sum_probs=53.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC--CCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR--GCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R--~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|+|.|.||||++|+.+++.|+++++++..+.. +.+.....+.-.+ ..+.+...| ++. + ++|+||.|.|
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~~~l~~~~s~~~~g~~l~~~g--~~i~v~~~~---~~~----~-~~DvV~~a~g 70 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPLSELRLYASPRSAGVRLAFRG--EEIPVEPLP---EGP----L-PVDLVLASAG 70 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCCSCCEEEECGGGSSCEEEETT--EEEEEEECC---SSC----C-CCSEEEECSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEeeccccCCCEEEEcC--ceEEEEeCC---hhh----c-CCCEEEECCC
Confidence 57999999999999999999977765332211 1000001111000 112222222 222 3 8999999987
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.. .+...+....+.| . ++|-.|+..
T Consensus 71 ~~--------------~s~~~a~~~~~~G-~-~vId~s~~~ 95 (331)
T 2yv3_A 71 GG--------------ISRAKALVWAEGG-A-LVVDNSSAW 95 (331)
T ss_dssp HH--------------HHHHHHHHHHHTT-C-EEEECSSSS
T ss_pred cc--------------chHHHHHHHHHCC-C-EEEECCCcc
Confidence 52 2344566666778 5 677777753
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0022 Score=55.78 Aligned_cols=93 Identities=15% Similarity=0.090 Sum_probs=56.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
++|.|+||||++|..|++.|.++++ +++.+.-..+. -+.+. +. ......-|+. ++ .++++|+||.|+
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~a-G~~~~-~~---~~~~~~~~~~-~~----~~~~~Dvvf~a~ 71 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQ-GRKLA-FR---GQEIEVEDAE-TA----DPSGLDIALFSA 71 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTS-SCEEE-ET---TEEEEEEETT-TS----CCTTCSEEEECS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccC-CCcee-ec---CCceEEEeCC-HH----HhccCCEEEECC
Confidence 6899999999999999998888743 46665432221 11111 11 1112112222 12 346899999998
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+.. .+...+..+.+.| . ++|=.|+..
T Consensus 72 ~~~--------------~s~~~a~~~~~~G-~-~vID~Sa~~ 97 (344)
T 3tz6_A 72 GSA--------------MSKVQAPRFAAAG-V-TVIDNSSAW 97 (344)
T ss_dssp CHH--------------HHHHHHHHHHHTT-C-EEEECSSTT
T ss_pred ChH--------------HHHHHHHHHHhCC-C-EEEECCCcc
Confidence 742 2355666677778 4 677777743
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00078 Score=58.01 Aligned_cols=67 Identities=18% Similarity=0.157 Sum_probs=49.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.+|+|.|+|. |.+|..+++.|++.|++|++.+|++++... +... ++.. .+++.++++++|+||-+.+
T Consensus 20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~-l~~~----g~~~-------~~~~~~~~~~aDvvi~~vp 86 (310)
T 3doj_A 20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDE-LVEH----GASV-------CESPAEVIKKCKYTIAMLS 86 (310)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHH-HHHT----TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHH-HHHC----CCeE-------cCCHHHHHHhCCEEEEEcC
Confidence 4689999987 999999999999999999999998776433 2221 1221 1344556678999998874
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00071 Score=59.06 Aligned_cols=96 Identities=19% Similarity=0.189 Sum_probs=62.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~~~d~vi~~ 83 (327)
..+|||+|+ |-+|..+++.+...|.+|++++|++++.. ..+..+ ... ..|..+.+ .+.+...++|+||++
T Consensus 165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~lG----a~~-~~d~~~~~~~~~~~~~~~~~d~vid~ 237 (339)
T 1rjw_A 165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLE-LAKELG----ADL-VVNPLKEDAAKFMKEKVGGVHAAVVT 237 (339)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHH-HHHHTT----CSE-EECTTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHCC----CCE-EecCCCccHHHHHHHHhCCCCEEEEC
Confidence 578999999 66999999999899999999998865532 233333 221 24555432 333333579999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
+|.. ......++.++..| +++.++..
T Consensus 238 ~g~~-------------~~~~~~~~~l~~~G---~~v~~g~~ 263 (339)
T 1rjw_A 238 AVSK-------------PAFQSAYNSIRRGG---ACVLVGLP 263 (339)
T ss_dssp SCCH-------------HHHHHHHHHEEEEE---EEEECCCC
T ss_pred CCCH-------------HHHHHHHHHhhcCC---EEEEeccc
Confidence 8742 12234455554444 77877654
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00077 Score=58.30 Aligned_cols=99 Identities=14% Similarity=0.031 Sum_probs=65.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccC----CCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMG----DLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
|+|.|+|+ |.+|..++..|+..|+ +|++++|+++.......... ......+ .. ++. +.++++|+||
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i-~~--~d~----~~~~~aDvVi 72 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANI-YA--GDY----ADLKGSDVVI 72 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEE-EE--CCG----GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEE-Ee--CCH----HHhCCCCEEE
Confidence 58999999 9999999999999998 99999998644322111000 0001122 11 232 3468999999
Q ss_pred Ecccccccc--CcchhHhhhhHHHHHHHHHHHHcC
Q 047628 82 NLIGREYET--RNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 82 ~~a~~~~~~--~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
-+++..... ...+....|......+++.+.+..
T Consensus 73 iav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~ 107 (319)
T 1a5z_A 73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA 107 (319)
T ss_dssp ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 998764422 234556667778888888887765
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0036 Score=53.47 Aligned_cols=37 Identities=19% Similarity=0.045 Sum_probs=33.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
|++|.++|- |..|..+++.|++.||+|++.+|++++.
T Consensus 3 M~kIgfIGl-G~MG~~mA~~L~~~G~~v~v~dr~~~~~ 39 (300)
T 3obb_A 3 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAV 39 (300)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred cCEEEEeee-hHHHHHHHHHHHhCCCeEEEEcCCHHHH
Confidence 468999998 9999999999999999999999987663
|
| >3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A* | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0027 Score=56.45 Aligned_cols=70 Identities=19% Similarity=0.192 Sum_probs=54.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+.+++|+|+|+ |.+|+.+++.+.+.|++|++++.++........ -..+..|..|.+.+.++++.+|+|..
T Consensus 12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~a-------d~~~~~~~~d~~~l~~~~~~~dvI~~ 81 (389)
T 3q2o_A 12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCAQVA-------DIEIVASYDDLKAIQHLAEISDVVTY 81 (389)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTTTTC-------SEEEECCTTCHHHHHHHHHTCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchHHhC-------CceEecCcCCHHHHHHHHHhCCEeee
Confidence 34579999998 889999999999999999999876544222111 13456788899999999999998853
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0014 Score=55.60 Aligned_cols=68 Identities=18% Similarity=0.156 Sum_probs=49.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
++|+|.|+|+ |.+|..+++.|++.|+ +|++.+|++++........ ++... .+..++++++|+||-
T Consensus 2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~----gi~~~-------~~~~~~~~~aDvVil 69 (280)
T 3tri_A 2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC----GVHTT-------QDNRQGALNADVVVL 69 (280)
T ss_dssp CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT----CCEEE-------SCHHHHHSSCSEEEE
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc----CCEEe-------CChHHHHhcCCeEEE
Confidence 4578999999 9999999999999998 8999999876643322211 23321 234556788999998
Q ss_pred ccc
Q 047628 83 LIG 85 (327)
Q Consensus 83 ~a~ 85 (327)
+..
T Consensus 70 av~ 72 (280)
T 3tri_A 70 AVK 72 (280)
T ss_dssp CSC
T ss_pred EeC
Confidence 873
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00057 Score=58.16 Aligned_cols=65 Identities=17% Similarity=0.189 Sum_probs=49.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|+|.|+|. |.+|..+++.|.+.|++|++.+|++++.... ... ++.. .+++.++++++|+||-+..
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~----g~~~-------~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEEL-AAL----GAER-------AATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-HHT----TCEE-------CSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHC----CCee-------cCCHHHHHhcCCEEEEEcC
Confidence 78999997 9999999999999999999999987764332 221 1221 1345566778999998875
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0008 Score=57.67 Aligned_cols=73 Identities=19% Similarity=0.130 Sum_probs=52.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
..+|||+|++|.+|..+++.+...|.+|++++|++++... ....+ ... ..|..+.+++.+.+.++|+||+ +|.
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~~g----a~~-~~~~~~~~~~~~~~~~~d~vid-~g~ 198 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PLALG----AEE-AATYAEVPERAKAWGGLDLVLE-VRG 198 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HHHTT----CSE-EEEGGGHHHHHHHTTSEEEEEE-CSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHhcC----CCE-EEECCcchhHHHHhcCceEEEE-CCH
Confidence 5789999999999999999998999999999998766432 23333 221 1344441344455578999999 874
|
| >4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.003 Score=59.18 Aligned_cols=89 Identities=12% Similarity=0.092 Sum_probs=68.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~ 86 (327)
++++|+|+ |.+|+++++.|.+.|++|+++.++++..... ..++.+|.++++.+.++ ++++|++|-+.+.
T Consensus 349 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~---------~~~i~gD~t~~~~L~~agi~~ad~vi~~~~~ 418 (565)
T 4gx0_A 349 ELIFIIGH-GRIGCAAAAFLDRKPVPFILIDRQESPVCND---------HVVVYGDATVGQTLRQAGIDRASGIIVTTND 418 (565)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCEEEEESSCCSSCCS---------SCEEESCSSSSTHHHHHTTTSCSEEEECCSC
T ss_pred CCEEEECC-CHHHHHHHHHHHHCCCCEEEEECChHHHhhc---------CCEEEeCCCCHHHHHhcCccccCEEEEECCC
Confidence 78999999 9999999999999999999999998764321 27889999999999875 5679999977653
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcc-eEE
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFI 120 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v 120 (327)
. +.|+ .+...+++.+ .+ ++|
T Consensus 419 d---------~~ni----~~~~~ak~l~-~~~~ii 439 (565)
T 4gx0_A 419 D---------STNI----FLTLACRHLH-SHIRIV 439 (565)
T ss_dssp H---------HHHH----HHHHHHHHHC-SSSEEE
T ss_pred c---------hHHH----HHHHHHHHHC-CCCEEE
Confidence 1 2233 3445667777 44 444
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0015 Score=56.86 Aligned_cols=76 Identities=16% Similarity=0.136 Sum_probs=50.1
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh-HHHHHhccccE
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN-TIKATMAKANV 79 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~-~~~~~~~~~d~ 79 (327)
|+.....++|.|+|. |.+|..+++.|.+.|++|++.+|+++.... ....+ +.. . .+.+ .+..+.+++|+
T Consensus 2 m~~~~~~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~~~~~~~-a~~~G----~~~--~--~~~~e~~~~a~~~aDl 71 (341)
T 3ktd_A 2 MTTKDISRPVCILGL-GLIGGSLLRDLHAANHSVFGYNRSRSGAKS-AVDEG----FDV--S--ADLEATLQRAAAEDAL 71 (341)
T ss_dssp ----CCSSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHH-HHHTT----CCE--E--SCHHHHHHHHHHTTCE
T ss_pred CCccCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcC----Cee--e--CCHHHHHHhcccCCCE
Confidence 444445678999995 999999999999999999999998755322 22222 221 1 2333 34444567899
Q ss_pred EEEcccc
Q 047628 80 VINLIGR 86 (327)
Q Consensus 80 vi~~a~~ 86 (327)
||-+...
T Consensus 72 VilavP~ 78 (341)
T 3ktd_A 72 IVLAVPM 78 (341)
T ss_dssp EEECSCH
T ss_pred EEEeCCH
Confidence 9988753
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.00092 Score=60.05 Aligned_cols=116 Identities=13% Similarity=0.053 Sum_probs=65.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEee-------------CCCChhHHHH
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF-------------NPRDDNTIKA 72 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~-------------Dl~~~~~~~~ 72 (327)
.|.+|.|+|. |++|..++..|.+.|++|++++.++++... +.. + +..+.+- .+.-..+..+
T Consensus 20 ~m~~IaViGl-GYVGLp~A~~~A~~G~~V~g~Did~~kV~~-ln~-G---~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ 93 (444)
T 3vtf_A 20 HMASLSVLGL-GYVGVVHAVGFALLGHRVVGYDVNPSIVER-LRA-G---RPHIYEPGLEEALGRALSSGRLSFAESAEE 93 (444)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHH-HHT-T---CCSSCCTTHHHHHHHHHHTTCEEECSSHHH
T ss_pred CCCEEEEEcc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH-HHC-C---CCCCCCCCHHHHHHHHHHcCCeeEEcCHHH
Confidence 3568999987 999999999999999999999987654221 110 0 0111110 0100123345
Q ss_pred HhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 73 TMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+++++|++|-|.+.+...+.......-...+..+.+.++..++-+-+|+-||.-+
T Consensus 94 ai~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVpp 148 (444)
T 3vtf_A 94 AVAATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPP 148 (444)
T ss_dssp HHHTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCT
T ss_pred HHhcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCC
Confidence 5678899998876543322111111112344556666665331235666677543
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0018 Score=55.94 Aligned_cols=108 Identities=13% Similarity=0.073 Sum_probs=67.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchh-hhc-ccCC-C-CCeeEEeeCCCChhHHHHHhccccE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPR-HLK-LMGD-L-GQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~-~~~-~~~~-~-~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
++|+|.|+|+ |.+|..++..|...|+ +|++++|+.+.... ... ..+. . ....+... .+. +.++++|+
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~----~~~~~aD~ 78 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDP----EICRDADM 78 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCG----GGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCH----HHhCCCCE
Confidence 3579999999 9999999999999998 99999998643220 111 0000 0 01222211 122 24678999
Q ss_pred EEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEE
Q 047628 80 VINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121 (327)
Q Consensus 80 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~ 121 (327)
||-+++.... ....+....|......+++.+++.+ ...+|.
T Consensus 79 Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~-~~~~vi 121 (319)
T 1lld_A 79 VVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA-PNAIYM 121 (319)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEE
T ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCceEE
Confidence 9999875432 2234455667777777888777655 333443
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00094 Score=51.30 Aligned_cols=70 Identities=13% Similarity=0.209 Sum_probs=50.2
Q ss_pred CCccHHHHHHHHHhCCCEEEEeeCCCCCch------hhhcccCCCCCeeEEeeCCCCh--hHHHHHhc------cccEEE
Q 047628 16 TGFLGRYVVQQLAKMGSQVLVPFRGCEDDP------RHLKLMGDLGQIVPMKFNPRDD--NTIKATMA------KANVVI 81 (327)
Q Consensus 16 tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~------~~~~~~~~~~~v~~~~~Dl~~~--~~~~~~~~------~~d~vi 81 (327)
+|.++...++.|.+.|.+|++..|+..... ..+...+ .+...+.+|++++ +++.++++ +-|++|
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G--~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV 102 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG--MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV 102 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT--CEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC--CeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 367899999999999999988888654321 1222223 3466778999988 87766553 239999
Q ss_pred Eccccc
Q 047628 82 NLIGRE 87 (327)
Q Consensus 82 ~~a~~~ 87 (327)
||+|..
T Consensus 103 nnAgg~ 108 (157)
T 3gxh_A 103 HCLANY 108 (157)
T ss_dssp ECSBSH
T ss_pred ECCCCC
Confidence 999864
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00044 Score=59.16 Aligned_cols=66 Identities=21% Similarity=0.301 Sum_probs=47.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+|+|.|+|+ |.+|..+++.|.+.|++|++.+|+++.... +... ++.. . .++.++++++|+||.+..
T Consensus 5 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~-~~~~----g~~~----~---~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 5 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIAD-VIAA----GAET----A---STAKAIAEQCDVIITMLP 70 (299)
T ss_dssp -CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHT----TCEE----C---SSHHHHHHHCSEEEECCS
T ss_pred cceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHC----CCee----c---CCHHHHHhCCCEEEEECC
Confidence 479999995 999999999999999999999988654322 2221 1221 1 234455678999998875
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00065 Score=59.54 Aligned_cols=98 Identities=18% Similarity=0.176 Sum_probs=62.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhc--cccE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMA--KANV 79 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~~d~ 79 (327)
...+|||+|+ |.+|..+++.+...|. +|++++|++++. ......+ ... ..|..+++ .+.++.. ++|+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~~G----a~~-~~~~~~~~~~~~v~~~~~g~g~D~ 239 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELAKKVG----ADY-VINPFEEDVVKEVMDITDGNGVDV 239 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHHHHHT----CSE-EECTTTSCHHHHHHHHTTTSCEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHhC----CCE-EECCCCcCHHHHHHHHcCCCCCCE
Confidence 3468999999 9999999999888998 999999886542 2233333 221 23444332 3333332 5899
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
||+++|.. ......++.++..| +++.+++..
T Consensus 240 vid~~g~~-------------~~~~~~~~~l~~~G---~iv~~g~~~ 270 (348)
T 2d8a_A 240 FLEFSGAP-------------KALEQGLQAVTPAG---RVSLLGLYP 270 (348)
T ss_dssp EEECSCCH-------------HHHHHHHHHEEEEE---EEEECCCCS
T ss_pred EEECCCCH-------------HHHHHHHHHHhcCC---EEEEEccCC
Confidence 99998742 12234455554444 788877643
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0015 Score=57.60 Aligned_cols=99 Identities=22% Similarity=0.293 Sum_probs=67.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
...+|||+|+ |-+|..+++.+...|.+|+++++++++.....+.++ ... ..|..+.+.+.++..++|+||+++|
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lG----a~~-v~~~~~~~~~~~~~~~~D~vid~~g 260 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFG----ADS-FLVSRDQEQMQAAAGTLDGIIDTVS 260 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSC----CSE-EEETTCHHHHHHTTTCEEEEEECCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcC----Cce-EEeccCHHHHHHhhCCCCEEEECCC
Confidence 3578999997 999999999998899999999988765433222333 221 2466677777776678999999987
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.... ....++.++..| +++.+++..
T Consensus 261 ~~~~-------------~~~~~~~l~~~G---~iv~~g~~~ 285 (366)
T 1yqd_A 261 AVHP-------------LLPLFGLLKSHG---KLILVGAPE 285 (366)
T ss_dssp SCCC-------------SHHHHHHEEEEE---EEEECCCCS
T ss_pred cHHH-------------HHHHHHHHhcCC---EEEEEccCC
Confidence 5311 123445554444 788877643
|
| >3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.97 E-value=0.003 Score=55.90 Aligned_cols=69 Identities=17% Similarity=0.113 Sum_probs=53.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|++|+|+|+ |.+|+.+++.|.+.|++|++++.++......+. -..+..|..|.+.+.++++++|+|+..
T Consensus 1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~-------~~~~~~~~~d~~~l~~~~~~~d~v~~~ 69 (380)
T 3ax6_A 1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPRSPAGQVA-------DEQIVAGFFDSERIEDLVKGSDVTTYD 69 (380)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTGGGS-------SEEEECCTTCHHHHHHHHHTCSEEEES
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhC-------ceEEECCCCCHHHHHHHHhcCCEEEec
Confidence 368999998 899999999999999999999876544221111 134567888999998888889998853
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00049 Score=58.58 Aligned_cols=67 Identities=16% Similarity=0.193 Sum_probs=49.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
||+|.|+|. |.+|..+++.|++.|++|++.+|++++.... ...+ +.. .++..++++++|+||-+...
T Consensus 1 M~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g----~~~-------~~~~~~~~~~advvi~~v~~ 67 (287)
T 3pdu_A 1 MTTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNPAKCAPL-VALG----ARQ-------ASSPAEVCAACDITIAMLAD 67 (287)
T ss_dssp CCCEEEECC-STTHHHHHHHHHHHTCCEEEECSSGGGGHHH-HHHT----CEE-------CSCHHHHHHHCSEEEECCSS
T ss_pred CCeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCC----Cee-------cCCHHHHHHcCCEEEEEcCC
Confidence 368999985 9999999999999999999999987764332 2211 221 12345566789999988753
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.00071 Score=60.69 Aligned_cols=80 Identities=16% Similarity=0.069 Sum_probs=48.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCC--CCCee-EE---eeCCCChhHHHHHhccccE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGD--LGQIV-PM---KFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~--~~~v~-~~---~~Dl~~~~~~~~~~~~~d~ 79 (327)
.+|+|.|+|+ |++|..++..|.+ |++|++++|++++.......... .+.++ .+ ...+.-..++.++++++|+
T Consensus 35 ~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDv 112 (432)
T 3pid_A 35 EFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADY 112 (432)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCE
Confidence 4579999997 9999999998887 99999999987653221111000 00000 00 0011111234567789999
Q ss_pred EEEccccc
Q 047628 80 VINLIGRE 87 (327)
Q Consensus 80 vi~~a~~~ 87 (327)
||-+.+..
T Consensus 113 ViiaVPt~ 120 (432)
T 3pid_A 113 VIIATPTD 120 (432)
T ss_dssp EEECCCCE
T ss_pred EEEeCCCc
Confidence 99887543
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00076 Score=58.46 Aligned_cols=97 Identities=15% Similarity=0.207 Sum_probs=62.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hHHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NTIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--~~d~vi 81 (327)
..+|||+||+|-+|...++.+...|.+|++++|++++.. .....+ ... ..|..+. +.+.+... ++|+||
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~~G----a~~-~~~~~~~~~~~~~~~~~~~~g~Dvvi 214 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAA-HAKALG----AWE-TIDYSHEDVAKRVLELTDGKKCPVVY 214 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHHT----CSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHcC----CCE-EEeCCCccHHHHHHHHhCCCCceEEE
Confidence 578999999999999999998889999999998766532 233333 111 2344333 33333333 589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++|.. .....++.++..| +++.++...
T Consensus 215 d~~g~~--------------~~~~~~~~l~~~G---~iv~~g~~~ 242 (325)
T 3jyn_A 215 DGVGQD--------------TWLTSLDSVAPRG---LVVSFGNAS 242 (325)
T ss_dssp ESSCGG--------------GHHHHHTTEEEEE---EEEECCCTT
T ss_pred ECCChH--------------HHHHHHHHhcCCC---EEEEEecCC
Confidence 999841 1123344444444 788777644
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0015 Score=56.97 Aligned_cols=75 Identities=19% Similarity=0.366 Sum_probs=51.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC-hhHHHHHhc--cccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD-DNTIKATMA--KANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~--~~d~vi~~ 83 (327)
..+|||+||+|-+|...++.+...|.+|+++++++++. ......+. -..+..+ .+ .+.+.+... ++|+||++
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~ga---~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~ 234 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKSVGA---DIVLPLE-EGWAKAVREATGGAGVDMVVDP 234 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHTC---SEEEESS-TTHHHHHHHHTTTSCEEEEEES
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcCC---cEEecCc-hhHHHHHHHHhCCCCceEEEEC
Confidence 57899999999999999999999999999999987663 33333331 1222222 22 233344433 58999999
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
+|.
T Consensus 235 ~g~ 237 (342)
T 4eye_A 235 IGG 237 (342)
T ss_dssp CC-
T ss_pred Cch
Confidence 984
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0013 Score=57.75 Aligned_cols=76 Identities=14% Similarity=0.153 Sum_probs=54.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCC------------------CChh
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP------------------RDDN 68 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl------------------~~~~ 68 (327)
..+|+|+|+ |-+|...++.+...|.+|++++|++.+... +...+ .+++..|. .+.+
T Consensus 184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~-~~~lG----a~~~~l~~~~~~~~gya~~~~~~~~~~~~~ 257 (381)
T 3p2y_A 184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQ-VRSVG----AQWLDLGIDAAGEGGYARELSEAERAQQQQ 257 (381)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHH-HHHTT----CEECCCC-------------CHHHHHHHHH
T ss_pred CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHcC----CeEEeccccccccccchhhhhHHHHhhhHH
Confidence 578999999 999999999999999999999999776332 22222 23332211 1245
Q ss_pred HHHHHhccccEEEEcccccc
Q 047628 69 TIKATMAKANVVINLIGREY 88 (327)
Q Consensus 69 ~~~~~~~~~d~vi~~a~~~~ 88 (327)
.+.++++++|+||.++..+.
T Consensus 258 ~l~e~l~~aDIVI~tv~iPg 277 (381)
T 3p2y_A 258 ALEDAITKFDIVITTALVPG 277 (381)
T ss_dssp HHHHHHTTCSEEEECCCCTT
T ss_pred HHHHHHhcCCEEEECCCCCC
Confidence 77888899999998875543
|
| >1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00099 Score=50.07 Aligned_cols=106 Identities=11% Similarity=-0.053 Sum_probs=64.8
Q ss_pred CCcEEEEEcCC---CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTT---GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~Gat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
..++|+|+|+| |.+|..+++.|++.|++|+.++.+... ..+. ++..+ .++.++-+.+|.++-
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp~~~~--~~i~------G~~~~-------~sl~el~~~vDlavi 76 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQG--EELF------GEEAV-------ASLLDLKEPVDILDV 76 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTT--SEET------TEECB-------SSGGGCCSCCSEEEE
T ss_pred CCCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCCCccc--CcCC------CEEec-------CCHHHCCCCCCEEEE
Confidence 35789999999 889999999999999997776433101 1110 12211 122223346898887
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCe
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWA 153 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~ 153 (327)
+... ..+..+++.|.+.| ++.++..++.. ...+.+.+++.++++
T Consensus 77 ~vp~--------------~~~~~v~~~~~~~g-i~~i~~~~g~~------------~~~~~~~a~~~Gir~ 120 (140)
T 1iuk_A 77 FRPP--------------SALMDHLPEVLALR-PGLVWLQSGIR------------HPEFEKALKEAGIPV 120 (140)
T ss_dssp CSCH--------------HHHTTTHHHHHHHC-CSCEEECTTCC------------CHHHHHHHHHTTCCE
T ss_pred EeCH--------------HHHHHHHHHHHHcC-CCEEEEcCCcC------------HHHHHHHHHHcCCEE
Confidence 7643 22345677777788 88776544321 134455566667653
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0034 Score=57.19 Aligned_cols=77 Identities=12% Similarity=0.106 Sum_probs=50.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+.+|+|.|+|. |.+|.++++.|.+.|++|++.+|++++....... +. ....+.. ..+.+++.+.++++|+||-+.
T Consensus 2 ~~~~kIgiIGl-G~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~-g~-~g~~i~~--~~s~~e~v~~l~~aDvVil~V 76 (484)
T 4gwg_A 2 NAQADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLAN-EA-KGTKVVG--AQSLKEMVSKLKKPRRIILLV 76 (484)
T ss_dssp -CCBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHT-TT-TTSSCEE--CSSHHHHHHTBCSSCEEEECS
T ss_pred CCCCEEEEECh-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc-cc-CCCceec--cCCHHHHHhhccCCCEEEEec
Confidence 34578999997 9999999999999999999999987664332221 10 0111111 124555555555688888776
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
..
T Consensus 77 p~ 78 (484)
T 4gwg_A 77 KA 78 (484)
T ss_dssp CS
T ss_pred CC
Confidence 54
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.00071 Score=51.20 Aligned_cols=86 Identities=14% Similarity=-0.016 Sum_probs=54.8
Q ss_pred CcEEEEEcCC---CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTT---GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~Gat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
.++|+|+|+| |.+|..+++.|++.|++|+.++++..... +. ++..+ .++ .++.+.+|+++-+
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~--i~------G~~~~-~sl------~el~~~~Dlvii~ 77 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKT--LL------GQQGY-ATL------ADVPEKVDMVDVF 77 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSE--ET------TEECC-SST------TTCSSCCSEEECC
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCcccccc--cC------Ceecc-CCH------HHcCCCCCEEEEE
Confidence 5689999998 88999999999999999888766541111 10 12221 122 2223468999877
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
... .....+++.+.+.| ++.++..
T Consensus 78 vp~--------------~~v~~v~~~~~~~g-~~~i~i~ 101 (145)
T 2duw_A 78 RNS--------------EAAWGVAQEAIAIG-AKTLWLQ 101 (145)
T ss_dssp SCS--------------THHHHHHHHHHHHT-CCEEECC
T ss_pred eCH--------------HHHHHHHHHHHHcC-CCEEEEc
Confidence 642 12345566666677 7776554
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0012 Score=59.92 Aligned_cols=102 Identities=17% Similarity=0.251 Sum_probs=62.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC----------------hhHH
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD----------------DNTI 70 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~----------------~~~~ 70 (327)
..+|||+||+|-+|...++.+...|.+|+++++++++. ...+.++...-+.....|+.+ .+.+
T Consensus 221 g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~-~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 299 (447)
T 4a0s_A 221 GDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE-AAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLV 299 (447)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhcCCCEEEecccccccccccccccccchhhhHHHHHH
Confidence 57899999999999999999999999999998865543 233334311001111112211 2333
Q ss_pred HHHh-ccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 71 KATM-AKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 71 ~~~~-~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.+.. .++|+||+++|.. .....++.++..| +++.+++..
T Consensus 300 ~~~~g~g~Dvvid~~G~~--------------~~~~~~~~l~~~G---~iv~~G~~~ 339 (447)
T 4a0s_A 300 VEKAGREPDIVFEHTGRV--------------TFGLSVIVARRGG---TVVTCGSSS 339 (447)
T ss_dssp HHHHSSCCSEEEECSCHH--------------HHHHHHHHSCTTC---EEEESCCTT
T ss_pred HHHhCCCceEEEECCCch--------------HHHHHHHHHhcCC---EEEEEecCC
Confidence 3333 2589999998841 1133444444444 788877653
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.003 Score=54.41 Aligned_cols=70 Identities=17% Similarity=0.084 Sum_probs=48.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHH-HhccccEEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKA-TMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-~~~~~d~vi~ 82 (327)
+.|+|.|+|. |.+|..+++.|.+.|+ +|++.+|+++.... ....+ -+..... + +.+ +++++|+||-
T Consensus 32 ~~~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~-a~~~G---~~~~~~~---~---~~~~~~~~aDvVil 100 (314)
T 3ggo_A 32 SMQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISK-AVDLG---IIDEGTT---S---IAKVEDFSPDFVML 100 (314)
T ss_dssp SCSEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHH-HHHTT---SCSEEES---C---TTGGGGGCCSEEEE
T ss_pred CCCEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHH-HHHCC---CcchhcC---C---HHHHhhccCCEEEE
Confidence 3579999995 9999999999999999 99999998755322 22222 1111111 2 234 5678999998
Q ss_pred cccc
Q 047628 83 LIGR 86 (327)
Q Consensus 83 ~a~~ 86 (327)
+...
T Consensus 101 avp~ 104 (314)
T 3ggo_A 101 SSPV 104 (314)
T ss_dssp CSCG
T ss_pred eCCH
Confidence 8754
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0015 Score=53.11 Aligned_cols=72 Identities=11% Similarity=0.155 Sum_probs=51.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+.+++|||+|| |-+|...++.|++.|.+|++++.........+... .+++++..++.. + .+.++|.||-+.
T Consensus 29 L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~~~---~~i~~i~~~~~~-~----dL~~adLVIaAT 99 (223)
T 3dfz_A 29 LKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEWEAK---GQLRVKRKKVGE-E----DLLNVFFIVVAT 99 (223)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHHHT---TSCEEECSCCCG-G----GSSSCSEEEECC
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHc---CCcEEEECCCCH-h----HhCCCCEEEECC
Confidence 45689999999 99999999999999999999987644322222222 357777666543 2 257899998554
Q ss_pred c
Q 047628 85 G 85 (327)
Q Consensus 85 ~ 85 (327)
+
T Consensus 100 ~ 100 (223)
T 3dfz_A 100 N 100 (223)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=96.89 E-value=0.00091 Score=58.46 Aligned_cols=96 Identities=18% Similarity=0.294 Sum_probs=60.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC-hhHHHHHhc--cccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD-DNTIKATMA--KANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~--~~d~vi~~ 83 (327)
..+|||+||+|-+|...++.+...|.+|+++ +++++ ....+.++ ...+. +-.+ .+.+.+... ++|+||++
T Consensus 151 g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~-~~~~~~lG----a~~i~-~~~~~~~~~~~~~~~~g~D~vid~ 223 (343)
T 3gaz_A 151 GQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSD-LEYVRDLG----ATPID-ASREPEDYAAEHTAGQGFDLVYDT 223 (343)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHH-HHHHHHHT----SEEEE-TTSCHHHHHHHHHTTSCEEEEEES
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHH-HHHHHHcC----CCEec-cCCCHHHHHHHHhcCCCceEEEEC
Confidence 5789999999999999999999999999998 65444 23334443 23222 2112 223333333 58999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+|.. .....++.++..| +++.++...
T Consensus 224 ~g~~--------------~~~~~~~~l~~~G---~iv~~g~~~ 249 (343)
T 3gaz_A 224 LGGP--------------VLDASFSAVKRFG---HVVSCLGWG 249 (343)
T ss_dssp SCTH--------------HHHHHHHHEEEEE---EEEESCCCS
T ss_pred CCcH--------------HHHHHHHHHhcCC---eEEEEcccC
Confidence 8731 1233444444444 777766543
|
| >1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0044 Score=55.01 Aligned_cols=71 Identities=17% Similarity=0.270 Sum_probs=53.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~ 82 (327)
.++|+|||+|+ |.+|..+++.+.+.|++|++++..+........ -+.+..|..|.+.+.++++ ++|+|+.
T Consensus 9 ~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~~-------d~~~~~~~~d~~~l~~~~~~~~~d~v~~ 80 (391)
T 1kjq_A 9 PAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVA-------HRSHVINMLDGDALRRVVELEKPHYIVP 80 (391)
T ss_dssp TTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS-------SEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhhhc-------cceEECCCCCHHHHHHHHHHcCCCEEEE
Confidence 34689999988 789999999999999999999877654221111 1345678888888888775 6899986
Q ss_pred c
Q 047628 83 L 83 (327)
Q Consensus 83 ~ 83 (327)
.
T Consensus 81 ~ 81 (391)
T 1kjq_A 81 E 81 (391)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0028 Score=56.12 Aligned_cols=76 Identities=14% Similarity=0.138 Sum_probs=55.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeC----------------CCC----
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN----------------PRD---- 66 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~D----------------l~~---- 66 (327)
..+|+|+|+ |-+|...++.+...|.+|++++|++.+.. .+...+ .+++..+ +++
T Consensus 190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~-~~~~~G----~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKE-QVASLG----AKFIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHH-HHHHTT----CEECCCCC-----------------CHHHH
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHHcC----Cceeecccccccccccccchhhhcchhhhh
Confidence 468999999 99999999999999999999999987632 222222 2222221 122
Q ss_pred --hhHHHHHhccccEEEEcccccc
Q 047628 67 --DNTIKATMAKANVVINLIGREY 88 (327)
Q Consensus 67 --~~~~~~~~~~~d~vi~~a~~~~ 88 (327)
.+.+.++++++|+||.++....
T Consensus 264 ~~~~~l~e~l~~aDVVI~tvlipg 287 (405)
T 4dio_A 264 KQAALVAEHIAKQDIVITTALIPG 287 (405)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSS
T ss_pred hhHhHHHHHhcCCCEEEECCcCCC
Confidence 3578888999999999876544
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.00058 Score=62.44 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=33.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
+|+|.|+|+ |++|..++..|.+.|++|++++|++++
T Consensus 8 ~~~I~VIG~-G~vG~~lA~~la~~G~~V~~~d~~~~~ 43 (478)
T 2y0c_A 8 SMNLTIIGS-GSVGLVTGACLADIGHDVFCLDVDQAK 43 (478)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CceEEEECc-CHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence 589999988 999999999999999999999998654
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00036 Score=59.95 Aligned_cols=108 Identities=14% Similarity=0.061 Sum_probs=70.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCC-----CCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
||.|+|| |.+|..++..|+..|. +|++++++.++.......+.. ....++... .+. ++++++|+||-
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~~aD~Vi~ 73 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSY----EDMRGSDIVLV 73 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTCSEEEE
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCH----HHhCCCCEEEE
Confidence 5899999 9999999999888787 799999986554221111100 012222221 122 36889999999
Q ss_pred ccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 83 LIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 83 ~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+++.... ....+....|......+++.+.+..+-..++.+|
T Consensus 74 ~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 116 (308)
T 2d4a_B 74 TAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITT 116 (308)
T ss_dssp CCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred eCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 9887542 2334667778888899999988876222455554
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00084 Score=58.93 Aligned_cols=71 Identities=21% Similarity=0.221 Sum_probs=47.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.+|+|.|+|. |.+|..+++.|++.|++|++.+|++++... +... ++.. ..+.+++.+....+|+||-+..
T Consensus 21 ~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~-l~~~----g~~~----~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 21 QSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQA-LERE----GIAG----ARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHTT----TCBC----CSSHHHHHHHSCSSCEEEECSC
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHC----CCEE----eCCHHHHHhcCCCCCEEEEeCC
Confidence 3589999996 999999999999999999999998765322 2211 1221 1233333332233499998875
Q ss_pred c
Q 047628 86 R 86 (327)
Q Consensus 86 ~ 86 (327)
.
T Consensus 91 ~ 91 (358)
T 4e21_A 91 A 91 (358)
T ss_dssp G
T ss_pred H
Confidence 4
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.00086 Score=56.58 Aligned_cols=76 Identities=14% Similarity=0.170 Sum_probs=49.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++++|+|+ |.+|+.++..|++.|.+|++.+|+.++........+....+.. .|+ +++.+ .++|+||+++
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~--~~~---~~~~~--~~~DivIn~t 188 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQA--VSM---DSIPL--QTYDLVINAT 188 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEE--EEG---GGCCC--SCCSEEEECC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEE--eeH---HHhcc--CCCCEEEECC
Confidence 34689999998 6799999999999999999999997654332222111011222 222 22110 3799999999
Q ss_pred cccc
Q 047628 85 GREY 88 (327)
Q Consensus 85 ~~~~ 88 (327)
+...
T Consensus 189 ~~~~ 192 (272)
T 1p77_A 189 SAGL 192 (272)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8643
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0022 Score=56.11 Aligned_cols=103 Identities=12% Similarity=0.164 Sum_probs=66.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchh----------------------hhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPR----------------------HLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~----------------------~~~~~~~~~~v~~~~~ 62 (327)
...+|+|+|+ |-+|++++..|...|. ++++++++.-.... .+.......+++.+..
T Consensus 117 ~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~ 195 (353)
T 3h5n_A 117 KNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIAL 195 (353)
T ss_dssp HTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEEEC
T ss_pred hCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEeec
Confidence 3579999999 7799999999999995 78888876422111 1111121224566667
Q ss_pred CCCChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 63 NPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
++.+...+.+ ++++|+||.+..... ..-..+-++|.+.+ + .+|+.+.
T Consensus 196 ~i~~~~~~~~-~~~~DlVvd~~Dn~~------------~~r~~ln~~c~~~~-~-p~i~~~~ 242 (353)
T 3h5n_A 196 NINDYTDLHK-VPEADIWVVSADHPF------------NLINWVNKYCVRAN-Q-PYINAGY 242 (353)
T ss_dssp CCCSGGGGGG-SCCCSEEEECCCCST------------THHHHHHHHHHHTT-C-CEEEEEE
T ss_pred ccCchhhhhH-hccCCEEEEecCChH------------HHHHHHHHHHHHhC-C-CEEEEEE
Confidence 7766554666 889999999863211 02234567888888 4 5665543
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0011 Score=57.92 Aligned_cols=74 Identities=22% Similarity=0.161 Sum_probs=51.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhc--cccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMA--KANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~~d~v 80 (327)
..+|||+|++|-+|..+++.+... |.+|++++|++++.. ..+..+ ... ..|..+.+ .+.+... ++|+|
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~-~~~~~g----~~~-~~~~~~~~~~~~~~~~~~~~~~d~v 244 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVE-AAKRAG----ADY-VINASMQDPLAEIRRITESKGVDAV 244 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHH-HHHHHT----CSE-EEETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HHHHhC----CCE-EecCCCccHHHHHHHHhcCCCceEE
Confidence 578999999999999999999988 999999998765532 223333 111 23444433 3444443 68999
Q ss_pred EEcccc
Q 047628 81 INLIGR 86 (327)
Q Consensus 81 i~~a~~ 86 (327)
|+++|.
T Consensus 245 i~~~g~ 250 (347)
T 1jvb_A 245 IDLNNS 250 (347)
T ss_dssp EESCCC
T ss_pred EECCCC
Confidence 999985
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=96.86 E-value=0.00084 Score=60.08 Aligned_cols=73 Identities=22% Similarity=0.292 Sum_probs=52.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++|+|+|+ |-+|+.+++.|...|. +|++++|+.++........+ ...+ +.+++.+.+.++|+||.+
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g----~~~~-----~~~~l~~~l~~aDvVi~a 234 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG----GEAV-----RFDELVDHLARSDVVVSA 234 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT----CEEC-----CGGGHHHHHHTCSEEEEC
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC----Ccee-----cHHhHHHHhcCCCEEEEc
Confidence 35689999998 9999999999999998 89999998655322222222 2221 234567777899999999
Q ss_pred cccc
Q 047628 84 IGRE 87 (327)
Q Consensus 84 a~~~ 87 (327)
.+..
T Consensus 235 t~~~ 238 (404)
T 1gpj_A 235 TAAP 238 (404)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 7643
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0024 Score=54.62 Aligned_cols=107 Identities=16% Similarity=0.089 Sum_probs=67.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchh--hhcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPR--HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~--~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
.++||.|+|| |.+|..++..|+..|. +|++++++++.... .+.... .++++. .. | + +.++++|+||
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~-~~~i~~-t~---d---~-~~l~~aD~Vi 82 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN-LPNVEI-SK---D---L-SASAHSKVVI 82 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT-CTTEEE-ES---C---G-GGGTTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc-CCCeEE-eC---C---H-HHHCCCCEEE
Confidence 3579999997 9999999999999888 99999998742111 111111 123333 22 2 2 4578999999
Q ss_pred Eccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEe
Q 047628 82 NLIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQIS 123 (327)
Q Consensus 82 ~~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~S 123 (327)
-+++...+ ....+....|......+++.+.+.. .. .++.+|
T Consensus 83 ~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~s 125 (303)
T 2i6t_A 83 FTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYS-QHSVLLVAS 125 (303)
T ss_dssp ECCCC----CCHHHHHHHHHHHHHHHHHHHHHHT-TTCEEEECS
T ss_pred EcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEcC
Confidence 99987311 1224556778888888888888775 33 344444
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00061 Score=58.75 Aligned_cols=68 Identities=12% Similarity=0.183 Sum_probs=48.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCC-CCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGC-EDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~-~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+|+|.|+|. |.+|..+++.|++.|+ +|++.+|++ +.....+...+ +.. .++..++++++|+||-+.
T Consensus 24 ~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g----~~~-------~~~~~e~~~~aDvVi~~v 91 (312)
T 3qsg_A 24 AMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELG----VSC-------KASVAEVAGECDVIFSLV 91 (312)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTT----CEE-------CSCHHHHHHHCSEEEECS
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCC----CEE-------eCCHHHHHhcCCEEEEec
Confidence 579999997 9999999999999999 999999974 22222222221 222 123455667899999887
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
..
T Consensus 92 p~ 93 (312)
T 3qsg_A 92 TA 93 (312)
T ss_dssp CT
T ss_pred Cc
Confidence 54
|
| >2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0057 Score=50.29 Aligned_cols=103 Identities=13% Similarity=0.198 Sum_probs=62.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEE-EeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh-ccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVL-VPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM-AKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~-~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-~~~d~vi~~a~ 85 (327)
|+|.|+|. |.+|+.+++.|.+.|+++. +.+|++ +.. . . . +++.+++ .++|+|+.|.+
T Consensus 1 m~vgiIG~-G~mG~~~~~~l~~~g~~lv~v~d~~~-~~~----------~---~---~---~~~~~l~~~~~DvVv~~~~ 59 (236)
T 2dc1_A 1 MLVGLIGY-GAIGKFLAEWLERNGFEIAAILDVRG-EHE----------K---M---V---RGIDEFLQREMDVAVEAAS 59 (236)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC-CCT----------T---E---E---SSHHHHTTSCCSEEEECSC
T ss_pred CEEEEECC-CHHHHHHHHHHhcCCCEEEEEEecCc-chh----------h---h---c---CCHHHHhcCCCCEEEECCC
Confidence 58999998 9999999999998899984 556653 211 1 1 1 2344455 68999999986
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCe
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWA 153 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~ 153 (327)
.. ....++..+.+.| ++++-.|+..... ........+..++.+..+
T Consensus 60 ~~--------------~~~~~~~~~l~~G--~~vv~~~~~~~~~------~~~~~~l~~~a~~~g~~~ 105 (236)
T 2dc1_A 60 QQ--------------AVKDYAEKILKAG--IDLIVLSTGAFAD------RDFLSRVREVCRKTGRRV 105 (236)
T ss_dssp HH--------------HHHHHHHHHHHTT--CEEEESCGGGGGS------HHHHHHHHHHHHHHCCCE
T ss_pred HH--------------HHHHHHHHHHHCC--CcEEEECcccCCh------HHHHHHHHHHHHhcCCeE
Confidence 42 1223445566677 4666555433221 112123445556666553
|
| >1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0028 Score=54.23 Aligned_cols=81 Identities=16% Similarity=0.104 Sum_probs=56.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCee-EEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIV-PMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++++|+|++..+|+.+++.|+..|.+|+++.|+..+.......... ... ......++++++.+.++++|+||.+
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~--~~~~~t~~~~t~~~~L~e~l~~ADIVIsA 252 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKL--NKHHVEDLGEYSEDLLKKCSLDSDVVITG 252 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSC--CCCEEEEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhh--hcccccccccccHhHHHHHhccCCEEEEC
Confidence 4578999999988999999999999999999998874432222111110 111 1011113457899999999999998
Q ss_pred cccc
Q 047628 84 IGRE 87 (327)
Q Consensus 84 a~~~ 87 (327)
.+..
T Consensus 253 tg~p 256 (320)
T 1edz_A 253 VPSE 256 (320)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 8764
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0022 Score=54.63 Aligned_cols=66 Identities=18% Similarity=0.214 Sum_probs=46.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|+|.|+|+ |.+|+.+++.|.+.|++|++.+ +++.... +... ++.. ..++.++++++|+||-+.+.
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~-~~~~----g~~~-------~~~~~~~~~~~D~vi~~vp~ 68 (295)
T 1yb4_A 3 AMKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IGPVADE-LLSL----GAVN-------VETARQVTEFADIIFIMVPD 68 (295)
T ss_dssp -CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SSCCCHH-HHTT----TCBC-------CSSHHHHHHTCSEEEECCSS
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CHHHHHH-HHHc----CCcc-------cCCHHHHHhcCCEEEEECCC
Confidence 368999996 9999999999999999999888 6655332 2221 1211 12345566789999988743
|
| >4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A* | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0052 Score=54.00 Aligned_cols=70 Identities=11% Similarity=0.082 Sum_probs=51.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCC-CChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP-RDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl-~~~~~~~~~~~~~d~vi~~a 84 (327)
|++|+|+|| |..|..++..+.+.|++|++++.++......+. + +++..|. .+.+.+....+++|+|+-..
T Consensus 1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~~~~~a------D-~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 71 (363)
T 4ffl_A 1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQALIRNYA------D-EFYCFDVIKEPEKLLELSKRVDAVLPVN 71 (363)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTTTTS------S-EEEECCTTTCHHHHHHHHTSSSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCChhHhhC------C-EEEECCCCcCHHHHHHHhcCCCEEEECC
Confidence 579999997 899999999999999999999887665332221 1 3344554 46677777778899987544
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0012 Score=55.78 Aligned_cols=74 Identities=18% Similarity=0.235 Sum_probs=49.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
...++++|+|+ |-+|+.++..|.+.|. +|++++|+.++.............+.... + +++ ..++|+||++
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~--~---~~l---~~~aDiIIna 194 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQA--F---EQL---KQSYDVIINS 194 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEE--G---GGC---CSCEEEEEEC
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEee--H---HHh---cCCCCEEEEc
Confidence 45689999998 7799999999999995 99999998766433222222111233332 1 221 1678999999
Q ss_pred cccc
Q 047628 84 IGRE 87 (327)
Q Consensus 84 a~~~ 87 (327)
.+..
T Consensus 195 Tp~g 198 (281)
T 3o8q_A 195 TSAS 198 (281)
T ss_dssp SCCC
T ss_pred CcCC
Confidence 8653
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.00047 Score=57.31 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=47.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC----EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS----QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~----~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+|+|.|+|+ |.+|..+++.|++.|+ +|++.+|++++........+ +.. ..+..++++++|+||-
T Consensus 2 ~~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~g----~~~-------~~~~~e~~~~aDvVil 69 (247)
T 3gt0_A 2 DKQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKYG----LTT-------TTDNNEVAKNADILIL 69 (247)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHHC----CEE-------CSCHHHHHHHCSEEEE
T ss_pred CCeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHhC----CEE-------eCChHHHHHhCCEEEE
Confidence 478999996 9999999999999998 99999998765332222211 221 1233455678999998
Q ss_pred cc
Q 047628 83 LI 84 (327)
Q Consensus 83 ~a 84 (327)
+.
T Consensus 70 av 71 (247)
T 3gt0_A 70 SI 71 (247)
T ss_dssp CS
T ss_pred Ee
Confidence 87
|
| >3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0053 Score=53.21 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=27.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFR 39 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R 39 (327)
|+++|.|.|+ |.||+.+++.|.++ +.+|.++.-
T Consensus 2 m~ikVgI~G~-GrIGr~l~R~l~~~p~vevvaI~d 35 (337)
T 3e5r_O 2 GKIKIGINGF-GRIGRLVARVALQSEDVELVAVND 35 (337)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred CceEEEEECc-CHHHHHHHHHHhCCCCeEEEEEEC
Confidence 3469999999 99999999999886 567777753
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0016 Score=56.19 Aligned_cols=66 Identities=21% Similarity=0.237 Sum_probs=48.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+|+|.|+|+ |.+|+.+++.|.+.|++|++.+|+++.... +...+ +.. . .+..++++++|+||-+..
T Consensus 30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~-~~~~g----~~~-~------~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTAEKCDL-FIQEG----ARL-G------RTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSGGGGHH-HHHTT----CEE-C------SCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCHHHHHH-HHHcC----CEE-c------CCHHHHHhcCCEEEEeCC
Confidence 478999997 999999999999999999999998765432 22211 221 1 123455678999998875
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 327 | ||||
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 2e-15 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 1e-14 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 2e-14 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 9e-14 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 1e-13 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 2e-13 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 4e-13 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 6e-13 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-11 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 2e-10 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 3e-09 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 2e-05 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 1e-04 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 7e-04 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 0.001 |
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 73.7 bits (179), Expect = 2e-15
Identities = 49/319 (15%), Positives = 100/319 (31%), Gaps = 27/319 (8%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFR----GCEDDPRHLKLMGDLGQIVPMKFNPRDD 67
+ G TG++G+ +V +G V FR D + L LG + ++ + D
Sbjct: 8 IVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKL-IEASLDDH 66
Query: 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127
+ + + +VVI+ + + + + KE G I RF+
Sbjct: 67 QRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA-------IKEAGNIKRFLPSEFGMD 119
Query: 128 SSSSPSRV------FSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQF-VKKFN 180
+ F K A+ T + G L + + +
Sbjct: 120 PDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRD 179
Query: 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTI 240
++GDG+ + V DV ++ D T +Y +I + E+ ++
Sbjct: 180 KVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLS 239
Query: 241 REYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQ 300
+ + + A + + R L+ + + I NA+
Sbjct: 240 EQNLDKIYISSQDFLADMKDKSY-----EEKIVRCHLYQIFFRGDLYNFEI-GPNAIEAT 293
Query: 301 DL--GIVPHKLKGYPTEYL 317
L + + Y Y+
Sbjct: 294 KLYPEVKYVTMDSYLERYV 312
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 71.4 bits (173), Expect = 1e-14
Identities = 47/306 (15%), Positives = 86/306 (28%), Gaps = 6/306 (1%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TG++GR+V + +G + R + + L N +
Sbjct: 8 LIGATGYIGRHVAKASLDLGHPTFLLVRE-STASSNSEKAQLLESFKASGANIVHGSIDD 66
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
V + VN A + G + F +
Sbjct: 67 HASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGT-VKRFFPSEFGNDVDNVHAVEP 125
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
VF KA A+ E T + G R L + + + GDG+ R
Sbjct: 126 AKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNAR 185
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPF 251
+ V D+ A+ D T +Y + +++EL L I + VP
Sbjct: 186 VVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPE 245
Query: 252 PVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHKLKG 311
+ + + D+ N V + L + +
Sbjct: 246 EEVLK-LIADTPFPANISIAISHSIFVKGDQTNFEIGPAGVEASQLY---PDVKYTTVDE 301
Query: 312 YPTEYL 317
Y + ++
Sbjct: 302 YLSNFV 307
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 69.8 bits (169), Expect = 2e-14
Identities = 38/226 (16%), Positives = 66/226 (29%), Gaps = 16/226 (7%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G +G GR +++++ + G V G + ++ Q V D +
Sbjct: 19 ILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASAF 78
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+V +G + + GG F +S GA SS
Sbjct: 79 QGH---DVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKSS 135
Query: 132 PSRVFSTKAAAEEAVLRELPW-ATIMRPAAMIGTED--RLLNKWAQFVKKFNFFPLFGDG 188
K E V ++ RP ++ R + FF D
Sbjct: 136 NFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRK-----FFGSLPDS 190
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAE 234
V VV V A+ + ++ E I H+L +
Sbjct: 191 WASGHSVPVVTVVRAMLNNVVRPRDKQMELLE--NKAI---HDLGK 231
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 68.9 bits (167), Expect = 9e-14
Identities = 33/282 (11%), Positives = 68/282 (24%), Gaps = 9/282 (3%)
Query: 11 TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70
V G TG G +++ A +G V +L + + +
Sbjct: 7 AVVGATGRQGASLIRVAAAVGHHVRAQVHS-LKGLIAEELQAIPNVTLFQGPLLNNVPLM 65
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS 130
A++ + +D+ AG + + +
Sbjct: 66 DTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKR--AGTIQHYIYSSMPDHSLYGPWPAV 123
Query: 131 SPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGST 190
T + + + L + + D
Sbjct: 124 PMWAPKFTVENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDI 183
Query: 191 RIQPVYVV-DVAAAVTAALKD-DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVK 248
+ + DV A+ KD G L + + ++ + YV+
Sbjct: 184 PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQ 242
Query: 249 VPFPVAKAV---AMPREILLKKVPFPLPRPGLFNLDEINAYT 287
VP K ++ +V F + F L E +
Sbjct: 243 VPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFPLPEFSRPA 284
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 68.3 bits (166), Expect = 1e-13
Identities = 46/272 (16%), Positives = 92/272 (33%), Gaps = 37/272 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-------PRHLKLMGDLGQIVPMKFNP 64
V G GF+G + V+QL + D +L + ++ + +
Sbjct: 5 VTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDI 64
Query: 65 RDDNTIKATMAKANVVINL----IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120
RD + + + +++ F + N + + A + G + R +
Sbjct: 65 RDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVV 123
Query: 121 QISCLGASSSSPSRVFS-------------TKAAAEEAVLR-----ELPWATIMRPAAMI 162
+S S S ++ +KA ++ L I R
Sbjct: 124 HVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDV-RITRCCNNY 182
Query: 163 G---TEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIY 219
G ++L+ + + PL+GDG+ + V+ D + L G+IY
Sbjct: 183 GPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA--GEIY 240
Query: 220 ELGGPDIFTVHELAELMYDTI-REYPHYVKVP 250
+GG T EL ++ D++ ++ KV
Sbjct: 241 HIGGGLELTNRELTGILLDSLGADWSSVRKVA 272
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 65.9 bits (159), Expect = 2e-13
Identities = 30/224 (13%), Positives = 62/224 (27%), Gaps = 22/224 (9%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G TG G +++ ++ + V + H +L +G + +
Sbjct: 7 LAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTA 66
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
+ +F V+ + + A E G + + + SS
Sbjct: 67 FCCLGTT-------IKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAKSS 119
Query: 132 PSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTR 191
+ + P TI RP+ + G + P +
Sbjct: 120 IFYNRVKGELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILP------GK 173
Query: 192 IQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAEL 235
+ D+A A+ ++G G EL +L
Sbjct: 174 YHGIEACDLARALWRLALEEGK---------GVRFVESDELRKL 208
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.1 bits (157), Expect = 4e-13
Identities = 33/215 (15%), Positives = 58/215 (26%), Gaps = 22/215 (10%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+FG TG G + Q + G +V V R D L G V + + + K
Sbjct: 8 IFGATGQTGLTTLAQAVQAGYEVTVLVR----DSSRLPSEGPRPAHVVVGDVLQAADVDK 63
Query: 72 ATMAKANVVINLIGREYE---TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128
+A + VI L+G + T S N A + G+ + +
Sbjct: 64 T-VAGQDAVIVLLGTRNDLSPTTVMSEGARNIVAAMKAHGV-DKVVACTSAFLLWDPTKV 121
Query: 129 SSSPSRVFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDG 188
V + + + P + + + DG
Sbjct: 122 PPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPLT------------GAYTVTLDG 169
Query: 189 STRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG 223
+ + D+ + L D G
Sbjct: 170 RGPSRVISKHDLGHFMLRCLTTDEYD-GHSTYPSH 203
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.8 bits (160), Expect = 6e-13
Identities = 40/272 (14%), Positives = 84/272 (30%), Gaps = 41/272 (15%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G GF+G ++ +L G +V V R+++ F + + ++
Sbjct: 6 ITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHE-----NFELINHDVVE 60
Query: 72 ATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS---- 123
+ + + +L Y N + G+AK G R + S
Sbjct: 61 PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG--ARLLLASTSEV 118
Query: 124 -------------CLGASSSSPSRVFS-TKAAAEEAVLRELPW----ATIMRPAAMIG-- 163
+ P + K AE + + R G
Sbjct: 119 YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPR 178
Query: 164 ---TEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYE 220
+ R+++ + + ++G GS YV D+ + A + + +
Sbjct: 179 MHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN---VSSPVN 235
Query: 221 LGGPDIFTVHELAELMYDTIREYPHYVKVPFP 252
LG P+ T+ E A+L+ + + +
Sbjct: 236 LGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA 267
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 60.9 bits (147), Expect = 4e-11
Identities = 43/283 (15%), Positives = 86/283 (30%), Gaps = 50/283 (17%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPF--RGCEDDPRHLKLMGDLGQIVPMKFNPRDDNT 69
+ G GF+G VV+ + K +V + L + + + + D
Sbjct: 5 ITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAE 64
Query: 70 IKATMAKAN--VVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHG--------G 115
I + V++L T +F + N + +A+++
Sbjct: 65 ITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKN 124
Query: 116 IMRFIQISCLGASSSSPSRVFS-----------------------TKAAAEEAVL----- 147
RF IS P +KA+++ V
Sbjct: 125 NFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT 184
Query: 148 RELPWATIMRPAAMIG---TEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204
LP + + G ++L+ + P++G G +YV D A A+
Sbjct: 185 YGLP-TIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARAL 243
Query: 205 TAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV 247
+ + G+ Y +GG + ++ + D + E
Sbjct: 244 HMVVTEGKA--GETYNIGGHNEKKNLDVVFTICDLLDEIVPKA 284
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 58.3 bits (139), Expect = 2e-10
Identities = 34/246 (13%), Positives = 67/246 (27%), Gaps = 32/246 (13%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
V G +G G+ V ++L + + + +G + + +G + D
Sbjct: 8 VTGASGRTGQIVYKKLKEGSDKFVA--KGLVRSAQGKEKIGGEADVFIGDITDADSINPA 65
Query: 72 ATMAKANVVINLIG---------REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122
A V++ + + FED + G +
Sbjct: 66 FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK 125
Query: 123 SCLGASSSSPSR------------VFSTKAAAEEAVLRELPWATIMRPAAMIGTEDRLLN 170
+ S + + K AE+ + TI+R ++ E +
Sbjct: 126 HIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRE 185
Query: 171 KWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFTVH 230
+ T + V DVA AL + K ++LG T
Sbjct: 186 LLVGKDDEL--------LQTDTKTVPRADVAEVCIQALLFEEAK-NKAFDLGSKPEGTST 236
Query: 231 ELAELM 236
+
Sbjct: 237 PTKDFK 242
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 55.2 bits (132), Expect = 3e-09
Identities = 44/338 (13%), Positives = 91/338 (26%), Gaps = 46/338 (13%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRHLKLMGDLGQIVPMKFNP--- 64
+A + G TG G Y+ + L + G +V R + + + KF+
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 65 --RDDNTIKATMAKANVVINLIGREYETRNYSFED------VNHFMAERIAGIAKEHG-- 114
D + + + + SFE V+ R+ + G
Sbjct: 63 DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122
Query: 115 GIMRFIQIS---CLGASSSSPSRVFS----------TKAAAEEAVLRELP----WATIMR 157
RF Q S G P + + K A + +A
Sbjct: 123 KKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGI 182
Query: 158 PAAMIG------TEDRLLNKWAQFVKKFNFFPL-FGDGSTRIQPVYVVDVAAAVTAALKD 210
R + + + + L G+ + + D L+
Sbjct: 183 LFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ 242
Query: 211 DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPF 270
+ + + + ++V + E+ + + V + P
Sbjct: 243 EQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVV---SVTGHDAPG 296
Query: 271 PLPRPGLFNLDEINAYTSD--TIVSDNALTFQDLGIVP 306
P + +D ++ T++ D + LG P
Sbjct: 297 VKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWKP 334
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 43.4 bits (101), Expect = 2e-05
Identities = 37/264 (14%), Positives = 79/264 (29%), Gaps = 33/264 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLV------PFRGCEDDPRHLKLMGDLGQIVPMKFNPR 65
+ G GF+G +++ L K+ +V+ + D+ R L ++ + R
Sbjct: 21 ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIR 80
Query: 66 DDNTIKATMAKANVVINLIG----REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121
+ + A + V++ + N + A++
Sbjct: 81 NLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYA 140
Query: 122 IS--CLGASSSSP----------SRVFSTKAAAEEAVLRELPW----ATIMRPAAMI--- 162
S G P S TK E +R +
Sbjct: 141 ASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRR 200
Query: 163 ----GTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKI 218
G ++ KW + + + + GDG T Y+ + A A + ++
Sbjct: 201 QDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQV 260
Query: 219 YELGGPDIFTVHELAELMYDTIRE 242
Y + ++++L + D + E
Sbjct: 261 YNIAVGGRTSLNQLFFALRDGLAE 284
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 40.8 bits (94), Expect = 1e-04
Identities = 39/272 (14%), Positives = 78/272 (28%), Gaps = 35/272 (12%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR-HLKLMGDLGQIVPMKFNPRDDNTI 70
V G TG G Y+ + L + G +V D R L+ +G G I + D ++
Sbjct: 5 VTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSV 64
Query: 71 KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAG------IAKEHGGIMRFIQIS- 123
+ + KA S+ G ++ RF Q S
Sbjct: 65 QRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQAST 124
Query: 124 --------CLGASSSSP----SRVFSTKAAAEEAVL----RELPWATIMRPAAMIG---- 163
++P S K + A+
Sbjct: 125 SEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRG 184
Query: 164 ---TEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYE 220
++ + A+ G+ + + D A+ L+ D Y
Sbjct: 185 IEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD---KADDYV 241
Query: 221 LGGPDIFTVHELAELMYDTI-REYPHYVKVPF 251
+ TV ++ ++ ++ + +Y ++K+
Sbjct: 242 VATGVTTTVRDMCQIAFEHVGLDYRDFLKIDP 273
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (88), Expect = 7e-04
Identities = 40/307 (13%), Positives = 81/307 (26%), Gaps = 43/307 (14%)
Query: 9 IATVFGTTGFLGRYVVQQLAKMGSQVLV-------PFRGCEDDPRHLKLMGDLGQIVPMK 61
+A + G TG G Y+ + L + G +V G + G +
Sbjct: 3 VALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHY 62
Query: 62 FNPRDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAG------IAKEHG- 114
+ D + + + SF+ + G K G
Sbjct: 63 GDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGL 122
Query: 115 -GIMRFIQIS---CLGASSSSPSRVFS----------TKAAAEEAVL--REL--PWATIM 156
++F Q S G P + + K A V+ RE +A
Sbjct: 123 INSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNG 182
Query: 157 RPAAMIGT-------EDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209
++ A+ G+ + + D A+ L+
Sbjct: 183 ILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQ 242
Query: 210 DDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVP 269
+D + + + ++ +V E E + I + + ++ +
Sbjct: 243 NDE---PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDL 299
Query: 270 FPLPRPG 276
RP
Sbjct: 300 KYY-RPT 305
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 37.9 bits (87), Expect = 0.001
Identities = 36/281 (12%), Positives = 74/281 (26%), Gaps = 56/281 (19%)
Query: 12 VFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK 71
+ G G +G + +QL + G LV E + + + D D +
Sbjct: 7 IAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDF-----FASERIDQVYLA 61
Query: 72 ATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS 131
A T F N + I A ++ + + + +
Sbjct: 62 AAKVGGI-------VANNTYPADFIYQNMMIESNIIHAAHQN-DVNKLLFLGSSCIYPKL 113
Query: 132 PSRVFS------------------TKAAAEEAVLR-----ELPWATIMRPAAMIGTEDRL 168
+ + K A + + + P + G D
Sbjct: 114 AKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDY-RSVMPTNLYGPHDNF 172
Query: 169 LNKWAQFVKKFNF------------FPLFGDGSTRIQPVYVVDVAAAVTAALKDD----- 211
+ + ++G G+ + ++V D+AAA ++
Sbjct: 173 HPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWL 232
Query: 212 --GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVP 250
M +G T+ ELA+ + + V
Sbjct: 233 ENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDA 273
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 327 | |||
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 100.0 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 100.0 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 100.0 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 100.0 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.97 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.97 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.95 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.95 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.95 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.82 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.82 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.81 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.81 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.81 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.8 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.8 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.8 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.8 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.8 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.79 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.79 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.79 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.79 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.79 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.78 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.78 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.78 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.78 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.78 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.78 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.78 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.77 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.77 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.76 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.76 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.76 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.76 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.76 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.75 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.75 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.75 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.74 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.73 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.73 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.72 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.72 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.71 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.71 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.7 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.69 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.68 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.68 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.68 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.68 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.67 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.67 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.67 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.64 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.64 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.63 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.63 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.62 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.61 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.58 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.57 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.55 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.55 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.54 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.54 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.53 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.45 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.44 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.44 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.29 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.26 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.26 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.75 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.56 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.44 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.35 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.33 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.33 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.3 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.29 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 98.28 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.11 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 98.08 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 98.06 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 98.04 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 98.02 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 97.96 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 97.91 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.89 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.89 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 97.88 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.88 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.84 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 97.84 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.84 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 97.83 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.82 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.8 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.8 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.78 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.74 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.73 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 97.72 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.72 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.7 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.7 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.69 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.69 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.69 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.69 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.65 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 97.62 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.61 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.51 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.49 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.49 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.49 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.48 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.48 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.41 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.4 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.4 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.39 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.37 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.29 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.28 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 97.24 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.22 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.2 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.16 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 97.15 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.12 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.04 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.02 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.02 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.98 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 96.97 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.97 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.97 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.94 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 96.93 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.89 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 96.88 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 96.88 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.88 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.85 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.83 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.81 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 96.81 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.8 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.78 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.72 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 96.7 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 96.65 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 96.64 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 96.62 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 96.61 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.58 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 96.54 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.38 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.36 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.35 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.34 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.27 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 96.26 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.23 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.22 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.2 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.18 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.18 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.17 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.14 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.09 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.06 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.04 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.01 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.97 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.94 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 95.92 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 95.91 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 95.88 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 95.85 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 95.83 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 95.82 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.78 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.75 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 95.74 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.73 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 95.73 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.72 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 95.67 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.56 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.54 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 95.54 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.51 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.47 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.38 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.34 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.3 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.28 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 95.26 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 95.25 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 95.14 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 95.12 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 95.06 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.04 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.02 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 95.0 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.74 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.68 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 94.67 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 94.49 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 94.47 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 94.45 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 94.45 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.3 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 94.25 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.21 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 94.19 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 94.19 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 94.16 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 94.08 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 94.02 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.97 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 93.97 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 93.9 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 93.84 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 93.75 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.61 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.52 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 93.52 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 93.48 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 93.45 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.44 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.44 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 93.43 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 93.43 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 93.38 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.35 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.35 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 93.2 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 93.17 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 93.1 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 93.02 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 92.95 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 92.91 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 92.9 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 92.77 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 92.77 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 92.63 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 92.44 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 92.29 | |
| d1qkia1 | 203 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 92.24 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 92.23 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 92.17 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 92.06 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 92.0 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 91.99 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 91.87 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 91.85 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 91.72 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 91.71 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 91.5 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 91.42 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 91.36 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 91.3 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 91.1 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 90.78 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 90.76 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 90.66 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 90.64 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.28 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 90.24 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 90.19 | |
| d1rm4a1 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.05 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 89.27 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 89.15 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 88.96 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 88.89 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.85 | |
| d1q7ea_ | 417 | Hypothetical protein YfdW {Escherichia coli [TaxId | 88.59 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 88.52 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 88.28 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 87.99 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 87.79 | |
| d1x74a1 | 359 | 2-methylacyl-CoA racemase Mcr {Mycobacterium tuber | 87.09 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 87.06 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.04 | |
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 86.64 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 86.55 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 86.32 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 86.04 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 85.56 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.24 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 85.05 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 84.72 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 84.35 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 84.31 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.6 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 83.6 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 83.59 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 82.89 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 82.58 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 82.55 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 82.4 | |
| d1ofua1 | 198 | Cell-division protein FtsZ {Pseudomonas aeruginosa | 82.31 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 82.08 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 82.0 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 81.83 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 81.35 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 81.2 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 80.82 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 80.74 | |
| d1lqta1 | 216 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 80.12 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=8.4e-43 Score=305.16 Aligned_cols=281 Identities=19% Similarity=0.205 Sum_probs=227.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEE------EeeCCCC-CchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVL------VPFRGCE-DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~------~~~R~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|||||||||||||++|++.|+++|++|+ .+++... .....+.......+++++.+|+.+.........++|.|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 6899999999999999999999997554 4433322 11222333333357999999999999999888999999
Q ss_pred EEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------C-chHHHhHHHHH
Q 047628 81 INLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------P-SRVFSTKAAAE 143 (327)
Q Consensus 81 i~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------~-~~y~~~K~~~E 143 (327)
+|+|+.... ..+....++|+.++.+++++|++.+ +++|||+||..+++.. | ++|+.+|..+|
T Consensus 81 i~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E 159 (322)
T d1r6da_ 81 VHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSD 159 (322)
T ss_dssp EECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHH
T ss_pred EeecccccccccccchHHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCCCCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 999977432 3456788999999999999999998 9999999998875432 1 78999999999
Q ss_pred HHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC
Q 047628 144 EAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG 216 (327)
Q Consensus 144 ~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 216 (327)
.+++.+ +++++++||+.+|||++ .+++.++..+..++.+.++|++++.++|+|++|+|+++..+++++.. +
T Consensus 160 ~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~~--~ 237 (322)
T d1r6da_ 160 LVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRA--G 237 (322)
T ss_dssp HHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCCT--T
T ss_pred HHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCCC--C
Confidence 998754 59999999999999964 36788888888888999999999999999999999999999998875 7
Q ss_pred ceEEecCCccccHHHHHHHHHHHhhcCCcccc-CChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCC
Q 047628 217 KIYELGGPDIFTVHELAELMYDTIREYPHYVK-VPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295 (327)
Q Consensus 217 ~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (327)
++||+++++++|+.|+++.+.+.+|.+..... .+. .|.. .....++.
T Consensus 238 ~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~--------------------~~~~-----------~~~~~~d~- 285 (322)
T d1r6da_ 238 EIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD--------------------RKGH-----------DLRYSLDG- 285 (322)
T ss_dssp CEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC--------------------CTTC-----------CCBCCBCC-
T ss_pred CeeEEeecccchhHHHHHHHHHHhCCCccceeecCC--------------------CCCC-----------CceeeeCH-
Confidence 89999999999999999999999997754321 110 0000 11234455
Q ss_pred cccccccCCccc-cccCccHHHHHHHhhC
Q 047628 296 ALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 296 ~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
+|+++.|||+|+ +++|+++++++||+++
T Consensus 286 ~k~~~~lg~~p~~~~eegI~~~i~w~~~n 314 (322)
T d1r6da_ 286 GKIERELGYRPQVSFADGLARTVRWYREN 314 (322)
T ss_dssp HHHHHHHCCCCCSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 488899999997 9999999999999975
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=9.4e-43 Score=309.23 Aligned_cols=290 Identities=17% Similarity=0.174 Sum_probs=225.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEE-eeCCCC-CchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLV-PFRGCE-DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~-~~R~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~ 83 (327)
|||||||||||||++|+++|++.|++|++ +++... .....+......++++++++|++|++.+.+++++ +|+||||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 68999999999999999999999997554 444322 2223333333445799999999999999998875 7999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcC--------CcceEEEEeccCCCCCC--------------------
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHG--------GIMRFIQISCLGASSSS-------------------- 131 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~--------~v~~~v~~Ss~~v~~~~-------------------- 131 (327)
|+.... ..+...+++|+.++.+++++|++.+ ++++|||+||..+++..
T Consensus 81 Aa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~ 160 (361)
T d1kewa_ 81 AAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTA 160 (361)
T ss_dssp CSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSC
T ss_pred ccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCC
Confidence 987542 3567789999999999999998764 14589999998775321
Q ss_pred --C-chHHHhHHHHHHHHHh----hCCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHH
Q 047628 132 --P-SRVFSTKAAAEEAVLR----ELPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVA 201 (327)
Q Consensus 132 --~-~~y~~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a 201 (327)
| +.|+.+|..+|.++.. .+++++++||+.+|||.+ .+++.++..+.+++++.++|++++.++|+|++|+|
T Consensus 161 ~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a 240 (361)
T d1kewa_ 161 YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA 240 (361)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCCeEEeCEEHHHHH
Confidence 1 6699999999999976 469999999999999964 46788888888888999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHH
Q 047628 202 AAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLD 281 (327)
Q Consensus 202 ~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (327)
+++..+++++.. +++||+++++.+|+.|+++.+.+.++...+...... ......+. .|.
T Consensus 241 ~ai~~~~~~~~~--~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~------- 299 (361)
T d1kewa_ 241 RALHMVVTEGKA--GETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYR-----------EQITYVAD-RPG------- 299 (361)
T ss_dssp HHHHHHHHHCCT--TCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGG-----------GGEEEECC-CTT-------
T ss_pred HHHHHHHhcCCC--CCeEEECCCCCcchHHHHhHhhhhcccccccccCcc-----------cceeecCC-CCC-------
Confidence 999999998875 779999999999999999999998875443221110 00000000 000
Q ss_pred HHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 282 EINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.......+.+++++.|||+|+ +++|+++++++||+++
T Consensus 300 -----~~~~~~~d~~k~~~~lgw~P~~~l~e~i~~ti~w~~~n 337 (361)
T d1kewa_ 300 -----HDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp -----CCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred -----CCceeeeCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHh
Confidence 111222334588889999997 9999999999999875
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.1e-42 Score=302.14 Aligned_cols=285 Identities=16% Similarity=0.158 Sum_probs=222.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc--cCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL--MGDLGQIVPMKFNPRDDNTIKATMA--KANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~ 83 (327)
|||||||||||||++|++.|+++|++|++++|........+.. .....+++++++|++|.+.+.++++ ++|+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 6899999999999999999999999999998854432222111 1112479999999999999999997 68999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------CchHHHhHHHHHHH
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------PSRVFSTKAAAEEA 145 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~~~y~~~K~~~E~~ 145 (327)
|+.... ..+...+++|+.++.+++++|++.+ +++||++||..++... .++|+.+|..+|++
T Consensus 81 Aa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~ 159 (338)
T d1udca_ 81 AGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQI 159 (338)
T ss_dssp CSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHH
T ss_pred CCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHH
Confidence 987532 3456789999999999999999998 9999999998775221 27899999999999
Q ss_pred HHhh-----CCCeEEEecCeeecCCC-------------hhHHHHHHHHhh-cCceeeecC------CCceecceeHHHH
Q 047628 146 VLRE-----LPWATIMRPAAMIGTED-------------RLLNKWAQFVKK-FNFFPLFGD------GSTRIQPVYVVDV 200 (327)
Q Consensus 146 ~~~~-----~~~~~i~r~~~~~G~~~-------------~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~i~~~D~ 200 (327)
+.+. +.+++++|++.+||+.. ..++.+...+.. .+.+.+.|+ +.+.++|+|+.|+
T Consensus 160 ~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~ 239 (338)
T d1udca_ 160 LTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDL 239 (338)
T ss_dssp HHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHH
T ss_pred HHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeeh
Confidence 8753 48999999999999742 244555544443 345666554 6788999999999
Q ss_pred HHHHHHHhhcCCC-CCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCC
Q 047628 201 AAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFN 279 (327)
Q Consensus 201 a~~~~~~l~~~~~-~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (327)
+.++..+...... ..+++||+++++.+|+.|+++.+.+.+|.+.++...+. .|..
T Consensus 240 ~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~--------------------~~~~---- 295 (338)
T d1udca_ 240 ADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR--------------------REGD---- 295 (338)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECC--------------------CTTC----
T ss_pred hhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCC--------------------CCCC----
Confidence 9888876664322 14679999999999999999999999998877665541 0000
Q ss_pred HHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC--CC
Q 047628 280 LDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG--GP 325 (327)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~--g~ 325 (327)
......+. +|+++.|||+|. +++|+++++++|++++ ||
T Consensus 296 -------~~~~~~d~-~k~~~~lgwkp~~~l~egi~~ti~w~~~~~~~~ 336 (338)
T d1udca_ 296 -------LPAYWADA-SKADRELNWRVTRTLDEMAQDTWHWQSRHPQGY 336 (338)
T ss_dssp -------CSBCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHHCTTCS
T ss_pred -------CCEeeECH-HHHHHHHCCCcCCCHHHHHHHHHHHHHhchhhC
Confidence 01123444 589899999997 9999999999999998 65
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.8e-41 Score=301.50 Aligned_cols=275 Identities=16% Similarity=0.133 Sum_probs=222.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
+|||||||||||||++|+++|+++||+|++++|.......... ...++..+|+++.+.+.++++++|+|||+|+.
T Consensus 15 nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~~ 89 (363)
T d2c5aa1 15 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM-----FCDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 89 (363)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGG-----TCSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhc-----ccCcEEEeechhHHHHHHHhhcCCeEeecccc
Confidence 6899999999999999999999999999999876544221111 24678889999999999999999999999976
Q ss_pred ccc-----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------------CchHHHhHHH
Q 047628 87 EYE-----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------------PSRVFSTKAA 141 (327)
Q Consensus 87 ~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------------~~~y~~~K~~ 141 (327)
... ..+......|+.++.+++++|++.+ +++||++||..+++.. .+.|+.+|..
T Consensus 90 ~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~ 168 (363)
T d2c5aa1 90 MGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLA 168 (363)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHH
T ss_pred cccccccccccccccccccchhhHHHHhHHhhC-ccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHH
Confidence 532 3445678889999999999999999 9999999998775321 1689999999
Q ss_pred HHHHHHhh----CCCeEEEecCeeecCCCh--------hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 142 AEEAVLRE----LPWATIMRPAAMIGTEDR--------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 142 ~E~~~~~~----~~~~~i~r~~~~~G~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|++++.+ +++++++||+.+||+.+. .................+|++.+.++|+|++|+++++..+++
T Consensus 169 ~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~~~~ 248 (363)
T d2c5aa1 169 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTK 248 (363)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHHHHh
Confidence 99988753 699999999999998642 223333444445667788999999999999999999999988
Q ss_pred cCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcC
Q 047628 210 DDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289 (327)
Q Consensus 210 ~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (327)
.+. ++.||+++++.+|+.|+++.+.+.+|.+.++...+ .|.. ...
T Consensus 249 ~~~---~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~---------------------~~~~-----------~~~ 293 (363)
T d2c5aa1 249 SDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIP---------------------GPEG-----------VRG 293 (363)
T ss_dssp SSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEEC---------------------CCCC-----------CSB
T ss_pred CCC---CCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCC---------------------CCCC-----------ccc
Confidence 653 57999999999999999999999999887766555 1110 111
Q ss_pred cccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 290 TIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 290 ~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
...+ .+++++.|||+|+ +++|+++++++||+++
T Consensus 294 ~~~d-~ska~~~LGw~p~~sleegi~~ti~w~~~~ 327 (363)
T d2c5aa1 294 RNSD-NNLIKEKLGWAPNMRLKEGLRITYFWIKEQ 327 (363)
T ss_dssp CEEC-CHHHHHHHSCCCCCCHHHHHHHHHHHHHHH
T ss_pred cccC-HHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence 2234 4599999999996 9999999999999764
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-41 Score=294.16 Aligned_cols=275 Identities=16% Similarity=0.151 Sum_probs=218.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
++||||||||||||++|+++|+++|++|++++|........+.......++.....|+ +..++.++|+|||||+.
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~-----~~~~~~~~d~VihlAa~ 75 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDV-----VEPLYIEVDQIYHLASP 75 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCT-----TSCCCCCCSEEEECCSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHH-----HHHHHcCCCEEEECccc
Confidence 3789999999999999999999999999999886554444443332223444444444 44456689999999987
Q ss_pred ccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC-----------------CC-chHHHhHHHHHH
Q 047628 87 EYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS-----------------SP-SRVFSTKAAAEE 144 (327)
Q Consensus 87 ~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~-----------------~~-~~y~~~K~~~E~ 144 (327)
... ..+...+++|+.++.+|+++|++.+ + ++||+||..++.. .| ++|+.+|.++|.
T Consensus 76 ~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~ 153 (312)
T d2b69a1 76 ASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAET 153 (312)
T ss_dssp CSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHH
T ss_pred CCchhHHhCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHH
Confidence 542 3456788999999999999999998 6 8999999876532 12 679999999999
Q ss_pred HHHhh----CCCeEEEecCeeecCCC-----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCC
Q 047628 145 AVLRE----LPWATIMRPAAMIGTED-----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSM 215 (327)
Q Consensus 145 ~~~~~----~~~~~i~r~~~~~G~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~ 215 (327)
+++.+ +++++++||+.+|||++ .+++.++..+..++.+.++|++.+.++++|++|+++++..+++...
T Consensus 154 ~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~~--- 230 (312)
T d2b69a1 154 MCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV--- 230 (312)
T ss_dssp HHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC---
T ss_pred HHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhcc---
Confidence 99654 69999999999999853 3677888888888999999999999999999999999999987664
Q ss_pred CceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCC
Q 047628 216 GKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295 (327)
Q Consensus 216 ~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (327)
++.||+++++.+++.|+++.+++.+|.+..+...+. .+.. ......+.
T Consensus 231 ~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--------------------~~~~-----------~~~~~~d~- 278 (312)
T d2b69a1 231 SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSE--------------------AQDD-----------PQKRKPDI- 278 (312)
T ss_dssp CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECC--------------------CTTC-----------CCCCCBCC-
T ss_pred CCceEecCCcccchhhHHHHHHHHhCCCCceEECCC--------------------CCCC-----------CCeeeECH-
Confidence 468999999999999999999999998776654441 0000 01123344
Q ss_pred cccccccCCccc-cccCccHHHHHHHhhC
Q 047628 296 ALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 296 ~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
+++++.|||+|. +++++++++++||+++
T Consensus 279 ~k~~~~lgw~p~~~l~~~I~~~i~w~~~~ 307 (312)
T d2b69a1 279 KKAKLMLGWEPVVPLEEGLNKAIHYFRKE 307 (312)
T ss_dssp HHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCCCCHHHHHHHHHHHHHHH
Confidence 588899999998 9999999999999863
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=7.3e-41 Score=296.71 Aligned_cols=303 Identities=14% Similarity=0.066 Sum_probs=210.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcc-----cCCCCCeeEEeeCCCChhHHHHHhccc--c
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKL-----MGDLGQIVPMKFNPRDDNTIKATMAKA--N 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~-----~~~~~~v~~~~~Dl~~~~~~~~~~~~~--d 78 (327)
++++||||||||||++|+++|+++|++|++++|..+.. ...+.. ....++++++++|++|.+++.++++++ |
T Consensus 1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (357)
T d1db3a_ 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (357)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCC
Confidence 36899999999999999999999999999999965421 111110 111257999999999999999999865 9
Q ss_pred EEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCC---------C---C-chHHHhH
Q 047628 79 VVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSS---------S---P-SRVFSTK 139 (327)
Q Consensus 79 ~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~---------~---~-~~y~~~K 139 (327)
+|||+|+..+. .++..++++|+.+|.+|+++|++.+ ++++|||+||..+|+. . | ++|+.+|
T Consensus 81 ~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK 160 (357)
T d1db3a_ 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAK 160 (357)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHH
T ss_pred EEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHH
Confidence 99999988543 3445688999999999999999976 1347999999876532 1 1 7899999
Q ss_pred HHHHHHHHhh----CCCeEEEecCeeecCCCh------hHHHHHHHHhh-cCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 140 AAAEEAVLRE----LPWATIMRPAAMIGTEDR------LLNKWAQFVKK-FNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 140 ~~~E~~~~~~----~~~~~i~r~~~~~G~~~~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
..+|++++.+ +++++++||+.+|||... .+...+..+.. ......+|++++.++++|++|+|+++..++
T Consensus 161 ~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~ 240 (357)
T d1db3a_ 161 LYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMML 240 (357)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHH
Confidence 9999998764 699999999999998531 23333333333 344556689999999999999999999999
Q ss_pred hcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCC--CCC----CCHHH
Q 047628 209 KDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPR--PGL----FNLDE 282 (327)
Q Consensus 209 ~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~ 282 (327)
+++. ++.||+++++.+|+.|+++.+.+.+|........+...... .........|. +.. .....
T Consensus 241 ~~~~---~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (357)
T d1db3a_ 241 QQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGI-------VVSVTGHDAPGVKPGDVIIAVDPRY 310 (357)
T ss_dssp SSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEE-------EEEECSSSCTTCCTTCEEEEECGGG
T ss_pred hCCC---CCeEEECCCCceehHHHHHHHHHHhCCccccccccccccch-------hhhhhcccccccccCceeEeecccc
Confidence 8653 57999999999999999999999998654433222100000 00000000000 000 00000
Q ss_pred HHhhhcCcccCCCcccccccCCccc-cccCccHHHHHH
Q 047628 283 INAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIW 319 (327)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~ 319 (327)
.+.........+.+|+++.|||+|+ +|+|++++++++
T Consensus 311 ~r~~~~~~~~~d~skakk~LGw~P~~sl~egI~~~I~~ 348 (357)
T d1db3a_ 311 FRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVAN 348 (357)
T ss_dssp CCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred CCCccccccccCHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 0000112222344599999999997 999999998654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.3e-41 Score=296.68 Aligned_cols=293 Identities=15% Similarity=0.141 Sum_probs=220.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHH-HhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKA-TMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-~~~~~d~vi~~a~ 85 (327)
|||||||||||||++|+++|+++| ++|+++++......... ..++++++++|+++.+++.+ +++++|+|||+|+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~----~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~ 76 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL----NHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVA 76 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT----TCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc----cCCCeEEEECccCChHHHHHHHHhCCCccccccc
Confidence 689999999999999999999999 58999988654422222 22579999999988766654 6778999999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------------C-chHHHhHHH
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------------P-SRVFSTKAA 141 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------------~-~~y~~~K~~ 141 (327)
.... ..+...+.+|+.++.+++++|.+.+ + ++++.||..++... | +.|+.+|..
T Consensus 77 ~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~-~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~ 154 (342)
T d2blla1 77 IATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQL 154 (342)
T ss_dssp CCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHH
T ss_pred cccccccccCCcccccccccccccccccccccc-c-cccccccccccccccccccccccccccccccCCCcchhhhcccc
Confidence 7543 3345678999999999999999998 5 56677776542111 1 679999999
Q ss_pred HHHHHHhh----CCCeEEEecCeeecCCC-----------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 142 AEEAVLRE----LPWATIMRPAAMIGTED-----------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 142 ~E~~~~~~----~~~~~i~r~~~~~G~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+|++++.+ +++++++|++.+||+.. ..+..+...+..++.+.++|++++.++++|++|+|+++..
T Consensus 155 ~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~ 234 (342)
T d2blla1 155 LDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYR 234 (342)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHH
T ss_pred hhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeee
Confidence 99999764 69999999999999731 2466777778888899999999999999999999999999
Q ss_pred HhhcCCC-CCCceEEecCCcc-ccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHH
Q 047628 207 ALKDDGT-SMGKIYELGGPDI-FTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEIN 284 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~~-~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (327)
+++++.. ..+++||+++++. +|+.|+++.+.+.+|........+.............. .....
T Consensus 235 ~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~ 299 (342)
T d2blla1 235 IIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYY---------------GKGYQ 299 (342)
T ss_dssp HHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC--------------------------
T ss_pred ehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccc---------------ccccc
Confidence 9987532 1578999987654 89999999999999977665555421111000000000 00000
Q ss_pred hhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 285 AYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 285 ~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.......+.+++++.|||+|+ +++|+|+++++||+++
T Consensus 300 --~~~~~~~d~~k~~~~lgw~P~~sleegl~~ti~~y~~~ 337 (342)
T d2blla1 300 --DVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRT 337 (342)
T ss_dssp ---CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_pred --cccccccCHHHHHHHHCCCcCCCHHHHHHHHHHHHHhC
Confidence 011222344699999999997 9999999999999875
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=8.1e-41 Score=294.81 Aligned_cols=289 Identities=15% Similarity=0.107 Sum_probs=228.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh---ccc---CCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL---KLM---GDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~---~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
+++++|||||||||||++|+++|++.|++|++++|........+ ... ...++++++.+|+.|...+.....+.+
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~~ 93 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVD 93 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccccccc
Confidence 34579999999999999999999999999999998554322211 111 112468999999999999998889999
Q ss_pred EEEEcccccc----ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC---------C----chHHHhHHH
Q 047628 79 VVINLIGREY----ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS---------P----SRVFSTKAA 141 (327)
Q Consensus 79 ~vi~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~---------~----~~y~~~K~~ 141 (327)
.|+|+++... ...+...+++|+.++.+|+++|++.+ +++|||+||..+++.. | +.|+.+|..
T Consensus 94 ~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~ 172 (341)
T d1sb8a_ 94 YVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYV 172 (341)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHH
T ss_pred ccccccccccccccccCccchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHH
Confidence 9999987643 24456788999999999999999999 9999999998876432 1 889999999
Q ss_pred HHHHHHhh----CCCeEEEecCeeecCCC-------hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 142 AEEAVLRE----LPWATIMRPAAMIGTED-------RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 142 ~E~~~~~~----~~~~~i~r~~~~~G~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+|++++.+ +++++++||+.+||+.. ..+..+...+..++++.+.|++.+.++|+|++|+++++..++..
T Consensus 173 ~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~ 252 (341)
T d1sb8a_ 173 NELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATA 252 (341)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhc
Confidence 99998754 49999999999999853 35677777788888899999999999999999999999998887
Q ss_pred CCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcC
Q 047628 211 DGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSD 289 (327)
Q Consensus 211 ~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (327)
+....+++||+++++.+|+.|+++.+.+.++.+.... ..+. .... .|. ...
T Consensus 253 ~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~---------------~~~~-~~~------------~~~ 304 (341)
T d1sb8a_ 253 GLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPV---------------YRDF-REG------------DVR 304 (341)
T ss_dssp CGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCE---------------EECC-CTT------------CCS
T ss_pred cccccceeeeecccccchHHHHHHHHHHHhcccccccccccc---------------ccCC-CCC------------CcC
Confidence 5432578999999999999999999999998653222 1110 0000 000 011
Q ss_pred cccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 290 TIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 290 ~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
....+.+|+++.|||+|+ +++++++++++||++
T Consensus 305 ~~~~d~~k~~~~LGw~p~~sl~~gi~~ti~wy~~ 338 (341)
T d1sb8a_ 305 HSLADISKAAKLLGYAPKYDVSAGVALAMPWYIM 338 (341)
T ss_dssp BCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHH
T ss_pred eeeeCHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 122334589899999997 999999999999987
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=5.1e-40 Score=290.20 Aligned_cols=280 Identities=18% Similarity=0.156 Sum_probs=222.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC---CchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE---DDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~---~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
||+|||||||||||++|+++|+++|++|.++.++.. .....+... ...+++++.+|++|.+.+.+++.++|.|+|+
T Consensus 2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~-~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI-LGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG-CSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHh-hcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 689999999999999999999999987666655421 111111111 1247999999999999999999999999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC------------------------C-ch
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS------------------------P-SR 134 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~------------------------~-~~ 134 (327)
|+.... .++...+++|+.++.+++++++..+ .++|++||..++... | +.
T Consensus 81 a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~ 158 (346)
T d1oc2a_ 81 AAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSP 158 (346)
T ss_dssp CSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSH
T ss_pred hhcccccchhhCcccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCCCCCCCCH
Confidence 987532 4567788999999999999999998 478888887665321 1 67
Q ss_pred HHHhHHHHHHHHHhh----CCCeEEEecCeeecCCC---hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 135 VFSTKAAAEEAVLRE----LPWATIMRPAAMIGTED---RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 135 y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|+.+|..+|++++.+ +++++++||+.+|||.+ ..+..++.....+..+.++|++++.++++|++|+|++++.+
T Consensus 159 Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a~~~~ 238 (346)
T d1oc2a_ 159 YSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 238 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHHHHHH
Confidence 999999999988653 59999999999999854 45666666677788888999999999999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCcc-ccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHY-VKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAY 286 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (327)
++++.. ++.||+++++..++.|+++.+.+.++.+... ...+. .|..
T Consensus 239 ~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------------------~~~~----------- 285 (346)
T d1oc2a_ 239 LTKGRM--GETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD--------------------RAGH----------- 285 (346)
T ss_dssp HHHCCT--TCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC--------------------CTTC-----------
T ss_pred Hhhccc--CccccccccccccchHHHHHHHHHhCCCCcceEECCC--------------------CCCC-----------
Confidence 998875 7899999999999999999999999865432 22220 0000
Q ss_pred hcCcccCCCcccccccCCccc--cccCccHHHHHHHhhC
Q 047628 287 TSDTIVSDNALTFQDLGIVPH--KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 287 ~~~~~~~~~~~~~~~lg~~p~--~~~~~l~~~~~~~~~~ 323 (327)
......| .+++++.|||+|+ +|+|+++++++||+++
T Consensus 286 ~~~~~~d-~~k~~~~LGw~P~~t~l~e~i~~ti~w~~~n 323 (346)
T d1oc2a_ 286 DLRYAID-ASKLRDELGWTPQFTDFSEGLEETIQWYTDN 323 (346)
T ss_dssp CCBCCBC-CHHHHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred CceeeeC-HHHHHHHHCCCCcCCCHHHHHHHHHHHHHHH
Confidence 1112234 4599999999996 6999999999999975
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1e-38 Score=278.94 Aligned_cols=283 Identities=16% Similarity=0.088 Sum_probs=216.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a 84 (327)
++|||||||||||++|++.|+++||+|++++|..+.. ...+......++++++++|++|.+.+.+.+.. .++++|++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 5899999999999999999999999999999976543 23343333335799999999999999988865 57888888
Q ss_pred ccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC---------CCCC----chHHHhHHHHHHHHH
Q 047628 85 GREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS---------SSSP----SRVFSTKAAAEEAVL 147 (327)
Q Consensus 85 ~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~---------~~~~----~~y~~~K~~~E~~~~ 147 (327)
+.... ..+...+..|+.++.+++++|++.+..++|+++||..++ |+.| +.|+.+|..+|+++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 160 (321)
T d1rpna_ 81 AQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITV 160 (321)
T ss_dssp SCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHH
Confidence 76432 334667889999999999999998844578888886654 2222 899999999999987
Q ss_pred hh----CCCeEEEecCeeecCCC--h----hHHHH-HHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCC
Q 047628 148 RE----LPWATIMRPAAMIGTED--R----LLNKW-AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMG 216 (327)
Q Consensus 148 ~~----~~~~~i~r~~~~~G~~~--~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~ 216 (327)
.+ +++++++||+.+|||.. . .+..+ .+.....+.....|++++.++|+|++|+|+++..+++++..
T Consensus 161 ~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~~~--- 237 (321)
T d1rpna_ 161 NYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKA--- 237 (321)
T ss_dssp HHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSSSC---
T ss_pred HHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcCCc---
Confidence 64 59999999999999953 1 22223 33333344555678999999999999999999999998753
Q ss_pred ceEEecCCccccHHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCC
Q 047628 217 KIYELGGPDIFTVHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDN 295 (327)
Q Consensus 217 ~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (327)
+.||+++++..|+.++++.+.+.+|.+.+.. ..+.. .. .|. .......+.
T Consensus 238 ~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---rp~------------~~~~~~~d~ 288 (321)
T d1rpna_ 238 DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPA--------------FF---RPA------------EVDVLLGNP 288 (321)
T ss_dssp CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGG--------------GC---CSS------------CCCBCCBCT
T ss_pred CCceecccccceehhhhHHHHHHhCCCccceeecCCC--------------CC---CCC------------ccCCccCCH
Confidence 6899999999999999999999998765422 22210 00 010 111222334
Q ss_pred cccccccCCccc-cccCccHHHHHHHhh
Q 047628 296 ALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 296 ~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
+|+++.|||+|+ +|+|+++++++|+.+
T Consensus 289 ~k~~k~lG~~P~~~l~e~i~~tv~~~l~ 316 (321)
T d1rpna_ 289 AKAQRVLGWKPRTSLDELIRMMVEADLR 316 (321)
T ss_dssp HHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 589899999997 999999999999764
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.4e-38 Score=280.94 Aligned_cols=285 Identities=19% Similarity=0.183 Sum_probs=216.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC------chhhhcc--cCCCCCeeEEeeCCCChhHHHHHhcc--
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED------DPRHLKL--MGDLGQIVPMKFNPRDDNTIKATMAK-- 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~------~~~~~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~~-- 76 (327)
.+||||||||||||++|+++|+++|++|++++|.... ....... .....+++++++|++|.+.+.+++.+
T Consensus 2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~ 81 (346)
T d1ek6a_ 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYS 81 (346)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccccc
Confidence 4799999999999999999999999999999763222 1111110 00125789999999999999998866
Q ss_pred ccEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------CchHHHh
Q 047628 77 ANVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------PSRVFST 138 (327)
Q Consensus 77 ~d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~~~y~~~ 138 (327)
+++++|+|+..+. ..+...+++|+.++.++++++++.+ +++|+|+||..++... .++|+.+
T Consensus 82 ~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~ 160 (346)
T d1ek6a_ 82 FMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKS 160 (346)
T ss_dssp EEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHH
T ss_pred cccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcC-cccccccccceeeeccccccccccccccccCChHHHH
Confidence 4689999987543 3456788999999999999999999 9999999998764222 1789999
Q ss_pred HHHHHHHHHhh-----CCCeEEEecCeeecCCC-------------hhHHHHHHHHh-hcCceeeec------CCCceec
Q 047628 139 KAAAEEAVLRE-----LPWATIMRPAAMIGTED-------------RLLNKWAQFVK-KFNFFPLFG------DGSTRIQ 193 (327)
Q Consensus 139 K~~~E~~~~~~-----~~~~~i~r~~~~~G~~~-------------~~~~~~~~~~~-~~~~~~~~~------~~~~~~~ 193 (327)
|..+|+.+.++ +++++++|++.+||+.. ..+..+...+. +...+.+.| ++.+.++
T Consensus 161 k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rd 240 (346)
T d1ek6a_ 161 KFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240 (346)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEEC
T ss_pred HHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEe
Confidence 99999988753 58999999999999742 13444443333 244455543 4667889
Q ss_pred ceeHHHHHHHHHHHhhcCCC-CCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCC
Q 047628 194 PVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPL 272 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (327)
|+|++|+|.++..++..... ..+++||+++++.+|+.|+++.+.+.+|.+.++...+. .
T Consensus 241 fi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~--------------------~ 300 (346)
T d1ek6a_ 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR--------------------R 300 (346)
T ss_dssp EEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC--------------------C
T ss_pred EEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCC--------------------C
Confidence 99999999999887655332 14679999999999999999999999998877655541 0
Q ss_pred CCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 273 PRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
|.. ......+ .+|+++.|||+|+ +++|+++++++||++|-
T Consensus 301 ~~e-----------~~~~~~d-~~k~~~~lgw~p~~slee~I~~~i~w~~~n~ 341 (346)
T d1ek6a_ 301 EGD-----------VAACYAN-PSLAQEELGWTAALGLDRMCEDLWRWQKQNP 341 (346)
T ss_dssp TTC-----------CSEECBC-CHHHHHTTCCCCCCCHHHHHHHHHHHHHHCT
T ss_pred CCC-----------CCEeeEC-HHHHHHHHCCCcCCCHHHHHHHHHHHHHhCH
Confidence 000 0112334 4589999999997 99999999999999874
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.7e-38 Score=279.25 Aligned_cols=282 Identities=17% Similarity=0.137 Sum_probs=210.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCChhHHHHHhc--cccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRDDNTIKATMA--KANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~ 83 (327)
|.|||||||||||++|+++|+++|++|++++|............ ....+++++++|++|.+.+.+++. ++|+|||+
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 81 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF 81 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence 56999999999999999999999999999987544322211100 011468999999999999999886 68999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC----------------C-chHHHhHHHH
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS----------------P-SRVFSTKAAA 142 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~----------------~-~~y~~~K~~~ 142 (327)
|+.... ..+..+..+|+.++.+++++|++.+ +++||++||..++... | ++|+.+|..+
T Consensus 82 Aa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~ 160 (347)
T d1z45a2 82 AGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAI 160 (347)
T ss_dssp CSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHH
T ss_pred cccccccccccCcccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHH
Confidence 987532 3456788899999999999999998 9999999998775321 1 7899999999
Q ss_pred HHHHHhh------CCCeEEEecCeeecCCC-------------hhHHHHHHHHhh-cCceeeecCC------Cceeccee
Q 047628 143 EEAVLRE------LPWATIMRPAAMIGTED-------------RLLNKWAQFVKK-FNFFPLFGDG------STRIQPVY 196 (327)
Q Consensus 143 E~~~~~~------~~~~~i~r~~~~~G~~~-------------~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~i~ 196 (327)
|++++.+ +++++++|++.+||+.. ..+..+...+.. ..++.++|++ ...+++++
T Consensus 161 E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~~~~d~~~ 240 (347)
T d1z45a2 161 ENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIH 240 (347)
T ss_dssp HHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEE
T ss_pred HHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCceeeeeee
Confidence 9988764 48899999999998632 234444444432 3445555554 45678888
Q ss_pred HHHHHHHHHHHhhcC------CCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCC
Q 047628 197 VVDVAAAVTAALKDD------GTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPF 270 (327)
Q Consensus 197 ~~D~a~~~~~~l~~~------~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (327)
+.|.+.++..+++.. .. .+++||+++++++|+.|+++.+.+.+|.+..+...+..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~------------------ 301 (347)
T d1z45a2 241 VVDLAKGHIAALQYLEAYNENEG-LCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR------------------ 301 (347)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCC-EEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC------------------------
T ss_pred eeccccccccccccccccccccc-ccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCC------------------
Confidence 999999888877632 22 46799999999999999999999999987765433310
Q ss_pred CCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 271 PLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
|. + ......+. ++++++|||+|. +++|+++++++|++++
T Consensus 302 --~~---------~--~~~~~~d~-sk~~~~lGw~p~~~lee~i~~ti~w~~~n 341 (347)
T d1z45a2 302 --AG---------D--VLNLTAKP-DRAKRELKWQTELQVEDSCKDLWKWTTEN 341 (347)
T ss_dssp ----------------CCCCCBCC-HHHHHHTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred --CC---------C--CCEeeECH-HHHHHHHCCCCCCCHHHHHHHHHHHHHhC
Confidence 00 0 01123344 599999999997 9999999999999986
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=5.7e-37 Score=274.25 Aligned_cols=286 Identities=17% Similarity=0.121 Sum_probs=211.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHh-CCCEEEEeeCCCC---Cc------hh---hhccc------CCCCCeeEEeeCCCCh
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAK-MGSQVLVPFRGCE---DD------PR---HLKLM------GDLGQIVPMKFNPRDD 67 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~R~~~---~~------~~---~~~~~------~~~~~v~~~~~Dl~~~ 67 (327)
.|||||||||||||++|+++|++ .|++|+++++-.. .. .. .+... .....+.++.+|++|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 47999999999999999999996 6899999874211 10 00 00000 0113578899999999
Q ss_pred hHHHHHhc---cccEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----------
Q 047628 68 NTIKATMA---KANVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS---------- 130 (327)
Q Consensus 68 ~~~~~~~~---~~d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~---------- 130 (327)
+.+.++++ ++|+|||+|+.... ..+.....+|+.++.++++++++.+ +++++++|+..++..
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~ 160 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA 160 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccC-Ccccccccccccccccccccccccc
Confidence 99998885 47999999987543 2345677899999999999999998 899999988765321
Q ss_pred ------C---C-chHHHhHHHHHHHHHhh----CCCeEEEecCeeecCCCh------------hHHHHHHHH--------
Q 047628 131 ------S---P-SRVFSTKAAAEEAVLRE----LPWATIMRPAAMIGTEDR------------LLNKWAQFV-------- 176 (327)
Q Consensus 131 ------~---~-~~y~~~K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~------------~~~~~~~~~-------- 176 (327)
. | ++|+.+|...|++++.+ +++++++||+.+||+.+. .++.++..+
T Consensus 161 ~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~ 240 (383)
T d1gy8a_ 161 EPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240 (383)
T ss_dssp CCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-
T ss_pred cccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhccccc
Confidence 1 1 78999999999999764 699999999999998542 223222222
Q ss_pred --------hhcCceeeec------CCCceecceeHHHHHHHHHHHhhcCCC-------CCCceEEecCCccccHHHHHHH
Q 047628 177 --------KKFNFFPLFG------DGSTRIQPVYVVDVAAAVTAALKDDGT-------SMGKIYELGGPDIFTVHELAEL 235 (327)
Q Consensus 177 --------~~~~~~~~~~------~~~~~~~~i~~~D~a~~~~~~l~~~~~-------~~~~~~~v~~~~~~s~~el~~~ 235 (327)
..+..+++.| ++.+.++|+|++|+|++++.+++.... ..+++||+++++++|+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~el~~~ 320 (383)
T d1gy8a_ 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVREVIEV 320 (383)
T ss_dssp ----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHHHHHH
T ss_pred cchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHHHHHH
Confidence 1233445544 467889999999999999998874211 1357999999999999999999
Q ss_pred HHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccH
Q 047628 236 MYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPT 314 (327)
Q Consensus 236 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~ 314 (327)
+.+.+|.+..+...+. .|. .......+.+|++++|||+|+ +++|+++
T Consensus 321 i~~~~~~~~~~~~~~~--------------------~~~------------d~~~~~~d~~k~~k~LGw~P~~~l~e~i~ 368 (383)
T d1gy8a_ 321 ARKTTGHPIPVRECGR--------------------REG------------DPAYLVAASDKAREVLGWKPKYDTLEAIM 368 (383)
T ss_dssp HHHHHCCCCCEEEECC--------------------CTT------------CCSEECBCCHHHHHHTCCCCSCCSHHHHH
T ss_pred HHHHhCCCCceEECCC--------------------CCC------------CcCEeeeCHHHHHHHHCCccCCCHHHHHH
Confidence 9999998877654440 000 011223344699999999997 9999998
Q ss_pred HH-HHHHhhC--CC
Q 047628 315 EY-LIWYRKG--GP 325 (327)
Q Consensus 315 ~~-~~~~~~~--g~ 325 (327)
++ +.|++++ ||
T Consensus 369 ~t~~~w~~~~~~~~ 382 (383)
T d1gy8a_ 369 ETSWKFQRTHPNGY 382 (383)
T ss_dssp HHHHHHHHTCTTTT
T ss_pred HHHHHHHHhCcccC
Confidence 86 6999887 66
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=2.6e-37 Score=271.51 Aligned_cols=281 Identities=16% Similarity=0.147 Sum_probs=214.1
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhccc--cEEEEccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKA--NVVINLIG 85 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~--d~vi~~a~ 85 (327)
||||||||||||++|+++|+++|++|+++++-.... ...+......++++++.+|+++.+.+.++++++ |+|||+|+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~aa 81 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLAG 81 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhcCCceEEeecc
Confidence 799999999999999999999999999997643322 222222223357999999999999999999874 99999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC-CCC-----------------------------C
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA-SSS-----------------------------S 131 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v-~~~-----------------------------~ 131 (327)
.... .++....++|+.+|.+|+++|.+.+ ++++++.||..+ +.. .
T Consensus 82 ~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T d1orra_ 82 QVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDF 160 (338)
T ss_dssp CCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCC
T ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCcccCCcccc
Confidence 7543 2456788999999999999999998 777666666432 110 0
Q ss_pred CchHHHhHHHHHHHHHh----hCCCeEEEecCeeecCCC------hhHHHHHHHHhh-----cCceeeecCCCceeccee
Q 047628 132 PSRVFSTKAAAEEAVLR----ELPWATIMRPAAMIGTED------RLLNKWAQFVKK-----FNFFPLFGDGSTRIQPVY 196 (327)
Q Consensus 132 ~~~y~~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~ 196 (327)
.+.|+.+|...|.+... .+....++|++.+||+.. ..+..+...+.+ ++.+.++|++.+.++++|
T Consensus 161 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~ 240 (338)
T d1orra_ 161 HSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLH 240 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEE
T ss_pred ccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeEeeec
Confidence 16799999999988654 458899999988886532 234444443332 567888999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCceEEecC--CccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCC
Q 047628 197 VVDVAAAVTAALKDDGTSMGKIYELGG--PDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPR 274 (327)
Q Consensus 197 ~~D~a~~~~~~l~~~~~~~~~~~~v~~--~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (327)
++|++++++.++++.....+++|++.+ ++.+++.|+++.+.+.+|.+.++...+. .|.
T Consensus 241 v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~--------------------~~~ 300 (338)
T d1orra_ 241 AEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV--------------------RES 300 (338)
T ss_dssp HHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC--------------------CSS
T ss_pred ccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCC--------------------CCC
Confidence 999999999999875422578999954 4569999999999999998877665541 000
Q ss_pred CCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 275 PGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
. ......+. +++++.|||+|+ +++|+++++++|+++
T Consensus 301 ~-----------~~~~~~d~-~k~~~~Lg~~p~~sl~e~i~~ti~W~k~ 337 (338)
T d1orra_ 301 D-----------QRVFVADI-KKITNAIDWSPKVSAKDGVQKMYDWTSS 337 (338)
T ss_dssp C-----------CSEECBCC-HHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred C-----------cCeeeECH-HHHHHHHCCCcCCCHHHHHHHHHHHHHc
Confidence 0 01122344 599999999997 999999999999986
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=9e-37 Score=273.86 Aligned_cols=286 Identities=16% Similarity=0.130 Sum_probs=209.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC---------------CC-Cchhhhccc--CCCCCeeEEeeCCCChh
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG---------------CE-DDPRHLKLM--GDLGQIVPMKFNPRDDN 68 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~---------------~~-~~~~~~~~~--~~~~~v~~~~~Dl~~~~ 68 (327)
.|||||||||||||++|+++|++.||+|++++.- +. .....+... ....+++++.+|++|.+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~ 80 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE 80 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence 3799999999999999999999999999998521 00 101111100 01146899999999999
Q ss_pred HHHHHhcc--ccEEEEccccccc-------cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC----------
Q 047628 69 TIKATMAK--ANVVINLIGREYE-------TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS---------- 129 (327)
Q Consensus 69 ~~~~~~~~--~d~vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~---------- 129 (327)
.+.+++++ +|+|||+|+.... ..+...+.+|+.++.+++++|++.+..++++++||..++.
T Consensus 81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~ 160 (393)
T d1i24a_ 81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY 160 (393)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence 99999986 5999999986432 1233577899999999999999988334677777765431
Q ss_pred ---------------CCC-chHHHhHHHHHHHHHh----hCCCeEEEecCeeecCCCh--------------------hH
Q 047628 130 ---------------SSP-SRVFSTKAAAEEAVLR----ELPWATIMRPAAMIGTEDR--------------------LL 169 (327)
Q Consensus 130 ---------------~~~-~~y~~~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~--------------------~~ 169 (327)
..| +.|+.+|..+|.++.. .+++++++||+.+||+... .+
T Consensus 161 ~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i 240 (393)
T d1i24a_ 161 ITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTAL 240 (393)
T ss_dssp EEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHH
T ss_pred ccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccccch
Confidence 112 5799999999999864 4699999999999998532 35
Q ss_pred HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEe-cCCccccHHHHHHHHHHHhhc---CCc
Q 047628 170 NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYEL-GGPDIFTVHELAELMYDTIRE---YPH 245 (327)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v-~~~~~~s~~el~~~i~~~~g~---~~~ 245 (327)
..+...+..+++++++|++.+.++|+|++|+++++..+++++.. .+..+.+ .+++.+|+.|+++.+.+..+. +++
T Consensus 241 ~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~-~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~~~ 319 (393)
T d1i24a_ 241 NRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK-AGEFRVFNQFTEQFSVNELASLVTKAGSKLGLDVK 319 (393)
T ss_dssp HHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC-TTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCCCC
T ss_pred hhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcc-cceeeeecCCCCeeEHHHHHHHHHHHHHhhCCCcc
Confidence 67777778888999999999999999999999999999998776 4543332 344789999999999887642 233
Q ss_pred cccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhCC
Q 047628 246 YVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKGG 324 (327)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~g 324 (327)
....+ .|.. . ........+.++++ .|||+|+ ++++.++++++|++++.
T Consensus 320 ~~~~~---------------------~~~~--------~-~~~~~~~~d~~k~~-~LGw~P~~~~~~~i~~~~~~~~~~k 368 (393)
T d1i24a_ 320 KMTVP---------------------NPRV--------E-AEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFK 368 (393)
T ss_dssp EEEEC---------------------CSSC--------S-CSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTG
T ss_pred eeecc---------------------CCCC--------C-CCccEecCCHHHHH-HcCCccccCHHHHHHHHHHHHHHHH
Confidence 22222 0000 0 01112233444664 5999998 89999999999988764
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-37 Score=274.99 Aligned_cols=298 Identities=15% Similarity=0.029 Sum_probs=213.5
Q ss_pred cEE-EEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhccc------CCCCCeeEEeeCCCChhHHHHHhcc--c
Q 047628 8 IIA-TVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLM------GDLGQIVPMKFNPRDDNTIKATMAK--A 77 (327)
Q Consensus 8 ~~i-lI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~------~~~~~v~~~~~Dl~~~~~~~~~~~~--~ 77 (327)
+|| ||||||||||++|+++|+++||+|++++|.++.. ...+..+ ....+++++.+|++|++.+.+++.+ +
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 467 9999999999999999999999999999976532 1111111 0114689999999999999999865 6
Q ss_pred cEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcC--CcceEEEEeccCCCCCC---------C----chHHHh
Q 047628 78 NVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHG--GIMRFIQISCLGASSSS---------P----SRVFST 138 (327)
Q Consensus 78 d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~--~v~~~v~~Ss~~v~~~~---------~----~~y~~~ 138 (327)
++++|+++.... ..+..+.++|+.+|.+++++|++++ ++++|||+||..++++. | ++|+.+
T Consensus 81 ~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~s 160 (347)
T d1t2aa_ 81 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAA 160 (347)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred ceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHH
Confidence 799999886542 3445677999999999999999987 13489999998876432 1 789999
Q ss_pred HHHHHHHHHhh----CCCeEEEecCeeecCCCh-------hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 139 KAAAEEAVLRE----LPWATIMRPAAMIGTEDR-------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 139 K~~~E~~~~~~----~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
|.++|++++.+ +++++++||+.+|||... ....+............+|++++.++++|++|+++++..+
T Consensus 161 K~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~ 240 (347)
T d1t2aa_ 161 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLM 240 (347)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHH
Confidence 99999998664 699999999999998532 2233444445566778889999999999999999999999
Q ss_pred hhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhh
Q 047628 208 LKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYT 287 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (327)
+++... +.|+++.....++.+..+.+...++..+.....+..... ..... ................
T Consensus 241 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~-~~~~~~~~~~~~rp~~ 306 (347)
T d1t2aa_ 241 LQNDEP---EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVG----------RCKET-GKVHVTVDLKYYRPTE 306 (347)
T ss_dssp HHSSSC---CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEE----------EETTT-CCEEEEECGGGSCSSC
T ss_pred hhcCCC---ccceeccccccccchhhhhhhhhhcceeeecccchhhhh----------hhhhc-CCceeeecccCCCCCC
Confidence 998764 579999889999999999999999876543332210000 00000 0000000000000001
Q ss_pred cCcccCCCcccccccCCccc-cccCccHHHHHH
Q 047628 288 SDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIW 319 (327)
Q Consensus 288 ~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~ 319 (327)
......+.+|+++.|||+|+ +|+|++++++++
T Consensus 307 ~~~~~~d~skak~~Lgw~P~~sl~e~i~~~I~~ 339 (347)
T d1t2aa_ 307 VDFLQGDCTKAKQKLNWKPRVAFDELVREMVHA 339 (347)
T ss_dssp CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHH
T ss_pred cCEeeECHHHHHHHHCCCcCCCHHHHHHHHHHH
Confidence 11222234599999999997 999999988755
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.5e-36 Score=261.35 Aligned_cols=264 Identities=16% Similarity=0.107 Sum_probs=207.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a 84 (327)
++||||||||||||++|+++|+++|+.|+++.+.. .+|+.+.+.+.+++++ +|.|+|+|
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------~~~~~~~~~~~~~~~~~~~d~v~~~a 62 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASERIDQVYLAA 62 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------hccccCHHHHHHHHhhcCCCEEEEcc
Confidence 57999999999999999999999999988775432 2478889999888765 79999998
Q ss_pred ccccc-----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--------------C----chHHHhHHH
Q 047628 85 GREYE-----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--------------P----SRVFSTKAA 141 (327)
Q Consensus 85 ~~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--------------~----~~y~~~K~~ 141 (327)
+.... ..+.+++++|+.+|.+++++|++.+ +++|||+||..++... + ++|+.+|.+
T Consensus 63 ~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~ 141 (315)
T d1e6ua_ 63 AKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIA 141 (315)
T ss_dssp CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred hhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHH
Confidence 76432 3345678899999999999999998 9999999998876421 1 469999999
Q ss_pred HHHHHHhh----CCCeEEEecCeeecCCCh-------h-----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 142 AEEAVLRE----LPWATIMRPAAMIGTEDR-------L-----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 142 ~E~~~~~~----~~~~~i~r~~~~~G~~~~-------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
+|++++.+ +++++++||+.+|||.+. . ..........+..+.+.|++...++++|++|+++++.
T Consensus 142 ~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~ 221 (315)
T d1e6ua_ 142 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI 221 (315)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHH
Confidence 99998753 699999999999998542 1 1223344455678888899999999999999999999
Q ss_pred HHhhcCC-------CCCCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCC
Q 047628 206 AALKDDG-------TSMGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLF 278 (327)
Q Consensus 206 ~~l~~~~-------~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (327)
.++.... ......++++.+...++.++++.+.+.+|.+..+...+. .|.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~--------------------~~~---- 277 (315)
T d1e6ua_ 222 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDAS--------------------KPD---- 277 (315)
T ss_dssp HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETT--------------------SCC----
T ss_pred HhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCC--------------------CCC----
Confidence 9886532 113568999999999999999999999998876554330 011
Q ss_pred CHHHHHhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhhC
Q 047628 279 NLDEINAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRKG 323 (327)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~~ 323 (327)
.......+.++++ .|||+|+ +|+|+++++++||+++
T Consensus 278 --------~~~~~~~d~sk~k-~Lg~~p~~~l~e~i~~ti~w~~~N 314 (315)
T d1e6ua_ 278 --------GTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQWFLEN 314 (315)
T ss_dssp --------CCSBCCBCCHHHH-HTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred --------CCceeccCHHHHH-HcCCCCCCCHHHHHHHHHHHHHHc
Confidence 1111223345774 6999997 9999999999999976
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=3.9e-36 Score=264.33 Aligned_cols=284 Identities=14% Similarity=0.084 Sum_probs=208.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhccc------CCCCCeeEEeeCCCChhHHHHHhcc--c
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLM------GDLGQIVPMKFNPRDDNTIKATMAK--A 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~------~~~~~v~~~~~Dl~~~~~~~~~~~~--~ 77 (327)
++++||||||||||+||++.|+++||+|++++|..+.. ...+... .....++++.+|+++.+.+.+.++. +
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 37899999999999999999999999999999965421 1111100 1124678999999999999998864 6
Q ss_pred cEEEEccccccc----cCcchhHhhhhHHHHHHHHHHHHcC----CcceEEEEeccCCC--------CCCC----chHHH
Q 047628 78 NVVINLIGREYE----TRNYSFEDVNHFMAERIAGIAKEHG----GIMRFIQISCLGAS--------SSSP----SRVFS 137 (327)
Q Consensus 78 d~vi~~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~----~v~~~v~~Ss~~v~--------~~~~----~~y~~ 137 (327)
|+|||+|+.... ..+......|..++.+++++++... ...++++.||..++ |+.| +.|+.
T Consensus 81 D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~ 160 (339)
T d1n7ha_ 81 DEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAA 160 (339)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHH
T ss_pred chhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhH
Confidence 999999987543 3556788899999999999987643 13367778876542 2222 78999
Q ss_pred hHHHHHHHHHh----hCCCeEEEecCeeecCCCh------hHHHH-HHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 138 TKAAAEEAVLR----ELPWATIMRPAAMIGTEDR------LLNKW-AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 138 ~K~~~E~~~~~----~~~~~~i~r~~~~~G~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+|..+|+++.. .+++++++||+.+|||... .+... ...........+.|++.+.++++|++|+|+++..
T Consensus 161 sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~ 240 (339)
T d1n7ha_ 161 SKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWL 240 (339)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHH
Confidence 99999998855 4699999999999998532 12222 2223334456667899999999999999999999
Q ss_pred HhhcCCCCCCceEEecCCccccHHHHHHHHHHHhhcCCccc-cCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHh
Q 047628 207 ALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIREYPHYV-KVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINA 285 (327)
Q Consensus 207 ~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (327)
+++++.. ..+++..+...+..++++.+.+.+|...... .+.. ... .|.
T Consensus 241 ~~~~~~~---~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~---r~~----------- 289 (339)
T d1n7ha_ 241 MLQQEKP---DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQ--------------RYF---RPA----------- 289 (339)
T ss_dssp HHTSSSC---CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECG--------------GGS---CSS-----------
T ss_pred HHhcCCC---CccccccccccccchhhhhhhhhhhcccCceeeecc--------------CCC---CCC-----------
Confidence 9998764 4566666788999999999999998654322 1110 000 010
Q ss_pred hhcCcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 286 YTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 286 ~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
.......+.+++++.|||+|+ +|+++++++++||.+
T Consensus 290 -~~~~~~~d~~Kak~~LGw~P~~~le~gi~~ti~~~~~ 326 (339)
T d1n7ha_ 290 -EVDNLQGDASKAKEVLGWKPQVGFEKLVKMMVDEDLE 326 (339)
T ss_dssp -CCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHH
T ss_pred -CCCeeeECHHHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 111222234589999999997 999999999999865
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=1.3e-35 Score=254.01 Aligned_cols=260 Identities=17% Similarity=0.154 Sum_probs=212.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~ 85 (327)
|||||||||||||++|+++|.++||+|++++|+. +|++|.+++.+++++ +|+|||+++
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~~~d~vih~a~ 61 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------LDITNVLAVNKFFNEKKPNVVINCAA 61 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------CCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------ccCCCHHHHHHHHHHcCCCEEEeecc
Confidence 7899999999999999999999999999998752 478899999999875 699999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC-------------CchHHHhHHHHHHHHHh
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS-------------PSRVFSTKAAAEEAVLR 148 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~-------------~~~y~~~K~~~E~~~~~ 148 (327)
.... ..+......|...+..+.+.++..+ ..++++|+..++... ...|+.+|...|+++++
T Consensus 62 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~~ 139 (281)
T d1vl0a_ 62 HTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKA 139 (281)
T ss_dssp CCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred ccccccccccchhhccccccccccccccccccc--ccccccccceeeeccccccccccccccchhhhhhhhhHHHHHHHH
Confidence 7543 2335566778888999999998886 577777776553211 17899999999999999
Q ss_pred hCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecCCcccc
Q 047628 149 ELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGGPDIFT 228 (327)
Q Consensus 149 ~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s 228 (327)
.+.+++++||+.+||++.++...+...+...+...+.+ ++.++++|++|+++++..++++... ++||+++++.+|
T Consensus 140 ~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~D~~~~~~~~~~~~~~---g~~~~~~~~~~s 214 (281)
T d1vl0a_ 140 LNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVH--DQVGTPTSTVDLARVVLKVIDEKNY---GTFHCTCKGICS 214 (281)
T ss_dssp HCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEES--SCEECCEEHHHHHHHHHHHHHHTCC---EEEECCCBSCEE
T ss_pred hCCCccccceeEEeCCCcccccchhhhhccCCceeecC--Cceeccchhhhhhhhhhhhhhhccc---CceeEeCCCccc
Confidence 99999999999999999998888888888787777764 5789999999999999999998764 599999999999
Q ss_pred HHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCCcccc
Q 047628 229 VHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGIVPHK 308 (327)
Q Consensus 229 ~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~p~~ 308 (327)
+.|+++.+++.+|.+.++.+++.. . .|.+ ..+ .....+++ +|+++.|||+|++
T Consensus 215 ~~e~~~~i~~~~g~~~~i~~i~~~--------------~----~~~~--a~r------p~~~~ld~-~k~~~~~g~~~~~ 267 (281)
T d1vl0a_ 215 WYDFAVEIFRLTGIDVKVTPCTTE--------------E----FPRP--AKR------PKYSVLRN-YMLELTTGDITRE 267 (281)
T ss_dssp HHHHHHHHHHHHCCCCEEEEECST--------------T----SCCS--SCC------CSBCCBCC-HHHHHTTCCCCCB
T ss_pred hHHHHHHHHHHhCCCceEEeccHH--------------H----cCCc--CCC------ccccccCH-HHHHHHhCCCCCC
Confidence 999999999999998887766510 0 1110 000 00123455 5999999999999
Q ss_pred ccCccHHHHHHHh
Q 047628 309 LKGYPTEYLIWYR 321 (327)
Q Consensus 309 ~~~~l~~~~~~~~ 321 (327)
|+|++++++++++
T Consensus 268 ~~~~l~~~l~~l~ 280 (281)
T d1vl0a_ 268 WKESLKEYIDLLQ 280 (281)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999986
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=1.5e-34 Score=255.84 Aligned_cols=285 Identities=14% Similarity=0.106 Sum_probs=213.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~ 83 (327)
++|||||||||||||++|++.|+++|++|++++|+.++....+......++++++.+|++|++.+.+++.. +|+|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 56899999999999999999999999999999998876554443333335799999999999999998875 6999999
Q ss_pred cccccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC----------CC---C-chHHHhHHHHHHH
Q 047628 84 IGREYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS----------SS---P-SRVFSTKAAAEEA 145 (327)
Q Consensus 84 a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~----------~~---~-~~y~~~K~~~E~~ 145 (327)
|+.... ..+.....+|+.++.++++++++.+....++++|+...+. +. | ++|+.+|...|..
T Consensus 87 aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~ 166 (356)
T d1rkxa_ 87 AAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELV 166 (356)
T ss_dssp CSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHH
T ss_pred hccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhh
Confidence 987543 3456788999999999999999987344555555543321 11 1 7899999999987
Q ss_pred HHh-------------hCCCeEEEecCeeecCCC----hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 146 VLR-------------ELPWATIMRPAAMIGTED----RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 146 ~~~-------------~~~~~~i~r~~~~~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
+.. .+..++++||+.+|||++ .+++.+...... +...+.+.+.+.++++|++|++.++..++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~v~D~~~a~~~~~ 245 (356)
T d1rkxa_ 167 TSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQ-SQPVIIRNPHAIRPWQHVLEPLSGYLLLA 245 (356)
T ss_dssp HHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHT-TCCEECSCTTCEECCEETHHHHHHHHHHH
T ss_pred hhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhC-CCceEEeeccccccccccccccchhhhhh
Confidence 753 247899999999999864 345666666654 44455688899999999999999999888
Q ss_pred hcCCCC---CC--ceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHH
Q 047628 209 KDDGTS---MG--KIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEI 283 (327)
Q Consensus 209 ~~~~~~---~~--~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (327)
..+... .+ ..+.....+.++..++++.+.+..+....+..... . .|..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~----~~~~-------- 298 (356)
T d1rkxa_ 246 QKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGN---------------A----HPHE-------- 298 (356)
T ss_dssp HHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC--------------------------C--------
T ss_pred hhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCC---------------C----CCCC--------
Confidence 864420 12 23333445679999999999999997766543320 0 0000
Q ss_pred HhhhcCcccCCCcccccccCCccc-cccCccHHHHHHHhh
Q 047628 284 NAYTSDTIVSDNALTFQDLGIVPH-KLKGYPTEYLIWYRK 322 (327)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~lg~~p~-~~~~~l~~~~~~~~~ 322 (327)
......|. +|++++|||+|+ +++++++++++||++
T Consensus 299 ---~~~~~~d~-skak~~LGw~P~~~l~egi~~ti~wyk~ 334 (356)
T d1rkxa_ 299 ---AHYLKLDC-SKAKMQLGWHPRWNLNTTLEYIVGWHKN 334 (356)
T ss_dssp ---CCCCCBCC-HHHHHHHCCCCCCCHHHHHHHHHHHHHH
T ss_pred ---cCeeeEcH-HHHHHHHCCCcCCCHHHHHHHHHHHHHH
Confidence 11123344 599999999997 999999999999986
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=2.3e-34 Score=253.31 Aligned_cols=232 Identities=16% Similarity=0.040 Sum_probs=179.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
.++|||||||||||++|++.|+++|++|++++|+.++...... ..........+.+|+.+.+++.+++.++|+|+|+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~ 90 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHI 90 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEEC
T ss_pred cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhh
Confidence 5799999999999999999999999999999998654221111 0111123456789999999999999999999999
Q ss_pred cccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC-----------------------------CCCC-
Q 047628 84 IGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS-----------------------------SSSP- 132 (327)
Q Consensus 84 a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~-----------------------------~~~~- 132 (327)
++.... ..+...+.+|+.+|.+++++|++.+.+++|||+||..+. +..+
T Consensus 91 a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~ 170 (342)
T d1y1pa1 91 ASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQ 170 (342)
T ss_dssp CCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTT
T ss_pred cccccccccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCC
Confidence 987543 344567788999999999999987449999999996531 0011
Q ss_pred ---chHHHhHHHHHHHHHhh----C--CCeEEEecCeeecCC------ChhHHHHHHHHhhcCceeeecCCCceecceeH
Q 047628 133 ---SRVFSTKAAAEEAVLRE----L--PWATIMRPAAMIGTE------DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 133 ---~~y~~~K~~~E~~~~~~----~--~~~~i~r~~~~~G~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 197 (327)
++|+.+|..+|++++.+ + +.++++||+.+|||. ...+..+...+.++...+.. .+.+.++++|+
T Consensus 171 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~v~v 249 (342)
T d1y1pa1 171 KSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL-ALMPPQYYVSA 249 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-HTCCSEEEEEH
T ss_pred CCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCccc-CCccceeeeeH
Confidence 57999999999876544 3 678899999999984 22455666666655544443 35566899999
Q ss_pred HHHHHHHHHHhhcCCCCCCceEEecCCccccHHHHHHHHHHHhh
Q 047628 198 VDVAAAVTAALKDDGTSMGKIYELGGPDIFTVHELAELMYDTIR 241 (327)
Q Consensus 198 ~D~a~~~~~~l~~~~~~~~~~~~v~~~~~~s~~el~~~i~~~~g 241 (327)
+|+|++++.+++++.. .+ .|++++++.+|+.|+++.|.+.+.
T Consensus 250 ~Dva~~~i~~l~~~~~-~g-~~~~~~~~~~t~~eia~~i~k~~p 291 (342)
T d1y1pa1 250 VDIGLLHLGCLVLPQI-ER-RRVYGTAGTFDWNTVLATFRKLYP 291 (342)
T ss_dssp HHHHHHHHHHHHCTTC-CS-CEEEECCEEECHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhhcCccc-cc-eEEEEcCCceEHHHHHHHHHHHcC
Confidence 9999999999998876 44 566777789999999999999873
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.6e-33 Score=226.14 Aligned_cols=197 Identities=16% Similarity=0.094 Sum_probs=165.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|.|+||+||||||+||++++++|+++||+|++++|++++..... ..+++++.+|++|++++.++++++|+|||++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~ 75 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-----PRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-----CCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-----ccccccccccccchhhHHHHhcCCCEEEEEe
Confidence 45689999999999999999999999999999999877643221 1468999999999999999999999999999
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC------chHHHhHHHHHHHHHhhCCCeEEEec
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP------SRVFSTKAAAEEAVLRELPWATIMRP 158 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~------~~y~~~K~~~E~~~~~~~~~~~i~r~ 158 (327)
|......+ ..++..++.++++++++++ ++|||++||.+++.+.+ ..|...|..+|+++++.+++|+++||
T Consensus 76 g~~~~~~~---~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~~~~~~tiirp 151 (205)
T d1hdoa_ 76 GTRNDLSP---TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMP 151 (205)
T ss_dssp CCTTCCSC---CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHHTCSEEEEECC
T ss_pred ccCCchhh---hhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCccccccccccchHHHHHHHHHHhcCCceEEEec
Confidence 87543332 3456789999999999999 99999999988765443 46888999999999999999999999
Q ss_pred CeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecC
Q 047628 159 AAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG 223 (327)
Q Consensus 159 ~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~ 223 (327)
+.+++... .+...+..++.....+++++|+|++++.+++++.. .|+.+.++.
T Consensus 152 ~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~-~g~~~~~s~ 203 (205)
T d1hdoa_ 152 PHIGDQPL------------TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDEY-DGHSTYPSH 203 (205)
T ss_dssp SEEECCCC------------CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCSTT-TTCEEEEEC
T ss_pred ceecCCCC------------cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCCC-CCEEEecCC
Confidence 99986422 23345555677788999999999999999999886 788888765
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-32 Score=226.69 Aligned_cols=206 Identities=17% Similarity=0.116 Sum_probs=167.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|++++|||||||||||++|+++|+++|+ +|++++|++.+...... .+++...+|+.+.+++.++++++|+|||
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~-----~~i~~~~~D~~~~~~~~~~~~~~d~vi~ 86 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAY-----KNVNQEVVDFEKLDDYASAFQGHDVGFC 86 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGG-----GGCEEEECCGGGGGGGGGGGSSCSEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccccc-----ceeeeeeecccccccccccccccccccc
Confidence 5678999999999999999999999984 89999998765432221 3578888999999999999999999999
Q ss_pred ccccccc-cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCC-eEEEecCe
Q 047628 83 LIGREYE-TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPW-ATIMRPAA 160 (327)
Q Consensus 83 ~a~~~~~-~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~-~~i~r~~~ 160 (327)
|++.... .....+..+|+.++.+++++|++.+ +++|||+|+.++++..++.|+.+|+.+|+.+++.+.+ ++|+||+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~~~~~~Y~~~K~~~E~~l~~~~~~~~~IlRP~~ 165 (232)
T d2bkaa1 87 CLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGV 165 (232)
T ss_dssp CCCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTCSSHHHHHHHHHHHHHHTTCCSEEEEEECCE
T ss_pred cccccccccchhhhhhhcccccceeeecccccC-ccccccCCccccccCccchhHHHHHHhhhccccccccceEEecCce
Confidence 9987543 3345678899999999999999999 9999999999999999999999999999999999865 89999999
Q ss_pred eecCCChh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEEecC
Q 047628 161 MIGTEDRL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYELGG 223 (327)
Q Consensus 161 ~~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~v~~ 223 (327)
+||+.+.. ...+.... +.....+......|+++|+|++++.++.++.. ++.+.+.+
T Consensus 166 i~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~~--~~~~i~~~ 223 (232)
T d2bkaa1 166 LLCDRQESRPGEWLVRKF-----FGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD--KQMELLEN 223 (232)
T ss_dssp EECTTGGGSHHHHHHHHH-----HCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC--SSEEEEEH
T ss_pred eecCCCcCcHHHHHHHHH-----hhccCCcccCCCeEEHHHHHHHHHHHHhcCcc--CCeEEEcH
Confidence 99986542 22222222 22222344455679999999999999988775 56777765
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=100.00 E-value=2.9e-33 Score=242.66 Aligned_cols=239 Identities=15% Similarity=0.139 Sum_probs=190.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh-hcc--cCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH-LKL--MGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~-~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
++||||||||||||++|+++|+++||+|++++|+....... ... .....+++++++|+.+.+.+.++++++++++++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~ 82 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA 82 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence 57899999999999999999999999999999987653211 110 001146899999999999999999999999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC-------chHHHhHHHHHHHHHhhCCCeEEE
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP-------SRVFSTKAAAEEAVLRELPWATIM 156 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~-------~~y~~~K~~~E~~~~~~~~~~~i~ 156 (327)
++.... ..|..++.+++++|++.+ ..++++.||.+++.+.+ ..|...|..++++....+++++++
T Consensus 83 ~~~~~~-------~~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 154 (312)
T d1qyda_ 83 LAGGVL-------SHHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYV 154 (312)
T ss_dssp CCCSSS-------STTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHHHHHHHTTCCBCEE
T ss_pred hhhccc-------ccchhhhhHHHHHHHHhc-CCcEEEEeeccccCCCcccccchhhhhhHHHHHHHHhhcccccceEEe
Confidence 875432 235566788999999988 67888889887754332 678889999999999999999999
Q ss_pred ecCeeecCCChhHHH-HHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc-eEEecCCccccHHHHHH
Q 047628 157 RPAAMIGTEDRLLNK-WAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK-IYELGGPDIFTVHELAE 234 (327)
Q Consensus 157 r~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~-~~~v~~~~~~s~~el~~ 234 (327)
||+.+||+....+.. +.......+.+.+++++++.++++|++|+|++++.++.++.. .++ .|++++++.+|++|+++
T Consensus 155 r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~-~~~~~~~~~~~~~~s~~e~~~ 233 (312)
T d1qyda_ 155 SSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT-LNKTMYIRPPMNILSQKEVIQ 233 (312)
T ss_dssp ECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG-SSSEEECCCGGGEEEHHHHHH
T ss_pred ccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccc-cCceEEEeCCCcCCCHHHHHH
Confidence 999999864332211 111223356678889999999999999999999999998876 555 46677778899999999
Q ss_pred HHHHHhhcCCccccCChHHH
Q 047628 235 LMYDTIREYPHYVKVPFPVA 254 (327)
Q Consensus 235 ~i~~~~g~~~~~~~~~~~~~ 254 (327)
.+++.+|.+.++.++|.+.+
T Consensus 234 ~~~~~~g~~~~~~~i~~~~~ 253 (312)
T d1qyda_ 234 IWERLSEQNLDKIYISSQDF 253 (312)
T ss_dssp HHHHHHTCCCEECCBCSHHH
T ss_pred HHHHHHCCCCeEEECCHHHH
Confidence 99999999999988886544
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=100.00 E-value=5e-33 Score=240.12 Aligned_cols=236 Identities=20% Similarity=0.188 Sum_probs=191.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh-----cccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL-----KLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
+++||||||||||||++++++|+++|++|++++|++....... .... ...++++.+|+.+.+.+.+.+++++.|
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~v 80 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK-ASGANIVHGSIDDHASLVEAVKNVDVV 80 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH-TTTCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhc-cCCcEEEEeecccchhhhhhhhhceee
Confidence 4689999999999999999999999999999999876542211 1111 135889999999999999999999999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC------chHHHhHHHHHHHHHhhCCCeE
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP------SRVFSTKAAAEEAVLRELPWAT 154 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~------~~y~~~K~~~E~~~~~~~~~~~ 154 (327)
+|+++... ..++.+++++++.++ ++++++.|+.+...+.. ..+...+...+.++.+.+.+++
T Consensus 81 i~~~~~~~-----------~~~~~~~~~a~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (307)
T d1qyca_ 81 ISTVGSLQ-----------IESQVNIIKAIKEVG-TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYT 148 (307)
T ss_dssp EECCCGGG-----------SGGGHHHHHHHHHHC-CCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHHTCCBE
T ss_pred eecccccc-----------cchhhHHHHHHHHhc-cccceeeeccccccccccccccccccccccccccchhhccCCCce
Confidence 99987542 344578889999988 88999999976643322 4577788889999999999999
Q ss_pred EEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc-eEEecCCccccHHHHH
Q 047628 155 IMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK-IYELGGPDIFTVHELA 233 (327)
Q Consensus 155 i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~-~~~v~~~~~~s~~el~ 233 (327)
++||+.+||+..+.+..+.....+.....+++.+++.++++|++|+|++++.+++++.. .++ .|++++++.+|+.|++
T Consensus 149 i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~~~~~~~~~~~~~s~~ei~ 227 (307)
T d1qyca_ 149 YVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT-LNKTLYLRLPANTLSLNELV 227 (307)
T ss_dssp EEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG-TTEEEECCCGGGEEEHHHHH
T ss_pred ecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhh-cCceeEEeCCCCccCHHHHH
Confidence 99999999976554444444445566778889999999999999999999999998876 455 5667778999999999
Q ss_pred HHHHHHhhcCCccccCChHHHH
Q 047628 234 ELMYDTIREYPHYVKVPFPVAK 255 (327)
Q Consensus 234 ~~i~~~~g~~~~~~~~~~~~~~ 255 (327)
+.+.+.+|.+.++..+|.+...
T Consensus 228 ~~~~~~~G~~~~~~~~~~~~~~ 249 (307)
T d1qyca_ 228 ALWEKKIDKTLEKAYVPEEEVL 249 (307)
T ss_dssp HHHHHHTTSCCEEEEECHHHHH
T ss_pred HHHHHHHCCCCcEEECCHHHHH
Confidence 9999999999998888866543
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.97 E-value=2.8e-30 Score=222.32 Aligned_cols=273 Identities=17% Similarity=0.164 Sum_probs=196.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc--ccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK--ANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~--~d~vi~~a~ 85 (327)
|||||||||||||++|++.|.+.|+.|.+ .++... +.+|++|.+.+.+++++ +|+||||||
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v~~-~~~~~~----------------~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa 63 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLIAL-DVHSKE----------------FCGDFSNPKGVAETVRKLRPDVIVNAAA 63 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEEEE-CTTCSS----------------SCCCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEE-ECCCcc----------------ccCcCCCHHHHHHHHHHcCCCEEEEecc
Confidence 78999999999999999999998875544 433211 25799999999999976 599999998
Q ss_pred cccc----cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC---------CC---C-chHHHhHHHHHHHHHh
Q 047628 86 REYE----TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS---------SS---P-SRVFSTKAAAEEAVLR 148 (327)
Q Consensus 86 ~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~---------~~---~-~~y~~~K~~~E~~~~~ 148 (327)
.... ..+...+..|..++.++++++++.+ + +++++||..++. .. | +.|+.+|..+|++++.
T Consensus 64 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~ 141 (298)
T d1n2sa_ 64 HTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD 141 (298)
T ss_dssp CCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred cccccccccCccccccccccccccchhhhhccc-c-ccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHh
Confidence 7542 3455678899999999999999987 4 677788865531 11 1 7899999999999999
Q ss_pred hCCCeEEEecCeee-cCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc---CCCCCCceEEecCC
Q 047628 149 ELPWATIMRPAAMI-GTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD---DGTSMGKIYELGGP 224 (327)
Q Consensus 149 ~~~~~~i~r~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~---~~~~~~~~~~v~~~ 224 (327)
......++|++..+ |++.+....+...+.....+... +....+++++.|+++++..++.. ... .+++||++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~~~~~~~i~~~~~~~~-~~~~~n~~~~ 218 (298)
T d1n2sa_ 142 NCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNKPE-VAGLYHLVAG 218 (298)
T ss_dssp HCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHCGG-GCEEEECCCB
T ss_pred hhcccccccccceeeccCCccchhhhhhhcccceeecc--cceeecccccchHHHHHHHHHhhhhcccc-ccccccccCC
Confidence 88777777776555 45555555566666655555554 45678999999999999887753 333 4689999999
Q ss_pred ccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCCCcccccccCC
Q 047628 225 DIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSDNALTFQDLGI 304 (327)
Q Consensus 225 ~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~ 304 (327)
+.++..|+++.+.+..+........+. .........+.+ ..| -....+|+ +|+++.|||
T Consensus 219 ~~~~~~~~~~~i~~~~~~~~~~~~~~~------------~~~i~~~~~~~~--a~R------P~~~~ld~-~K~~~~~~~ 277 (298)
T d1n2sa_ 219 GTTTWHDYAALVFDEARKAGITLALTE------------LNAVPTSAYPTP--ASR------PGNSRLNT-EKFQRNFDL 277 (298)
T ss_dssp SCEEHHHHHHHHHHHHHHHTCCCCCCE------------EEEECSTTSCCS--SCC------CSBCCBCC-HHHHHHHTC
T ss_pred CceecHHHHHHHHhhhhccCccccccc------------eeeeehhhcCcc--CCC------ccccccCH-HHHHHHHCC
Confidence 999999999999887764322222210 000000000110 000 00113455 589899999
Q ss_pred ccccccCccHHHHHHHhhC
Q 047628 305 VPHKLKGYPTEYLIWYRKG 323 (327)
Q Consensus 305 ~p~~~~~~l~~~~~~~~~~ 323 (327)
+|++|+++++++++++.+.
T Consensus 278 ~~~~~~~gl~~~i~~~~~~ 296 (298)
T d1n2sa_ 278 ILPQWELGVKRMLTEMFTT 296 (298)
T ss_dssp CCCBHHHHHHHHHHHHHSC
T ss_pred CCCcHHHHHHHHHHHHHhh
Confidence 9999999999999998765
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2.3e-30 Score=223.72 Aligned_cols=269 Identities=16% Similarity=0.086 Sum_probs=174.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHH-HHH-----hccccEEE
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTI-KAT-----MAKANVVI 81 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~-~~~-----~~~~d~vi 81 (327)
|||||||||||++|+++|+++|+ +|+++++-.... ...+.. ...+|..+.+.+ ... +..+++|+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 73 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD--------LNIADYMDKEDFLIQIMAGEEFGDVEAIF 73 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT--------SCCSEEEEHHHHHHHHHTTCCCSSCCEEE
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc--------cchhhhccchHHHHHHhhhhcccchhhhh
Confidence 89999999999999999999995 799886543321 111111 111222222222 222 24579999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC-CC------------CCchHHHhHHHHHHHH
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS-SS------------SPSRVFSTKAAAEEAV 146 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~-~~------------~~~~y~~~K~~~E~~~ 146 (327)
|+|+.... .........++.++.+++++++..+ ++ +++.||..++ .. ..+.|+.+|..+|.++
T Consensus 74 ~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~ 151 (307)
T d1eq2a_ 74 HEGACSSTTEWDGKYMMDNNYQYSKELLHYCLERE-IP-FLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYV 151 (307)
T ss_dssp ECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHT-CC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHH
T ss_pred hhccccccccccccccccccccccccccccccccc-cc-ccccccccccccccccccccccccccccccccccchhhhhc
Confidence 99986433 3335577888999999999999998 75 5555554432 11 1278999999999999
Q ss_pred Hhh----CCCeEEEecCeeecCCCh-------hHHHHHHHHhhcCce-eeecCCCceecceeHHHHHHHHHHHhhcCCCC
Q 047628 147 LRE----LPWATIMRPAAMIGTEDR-------LLNKWAQFVKKFNFF-PLFGDGSTRIQPVYVVDVAAAVTAALKDDGTS 214 (327)
Q Consensus 147 ~~~----~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~ 214 (327)
+.+ +++++++||+.+|||... ....+...+..++.. ...|++...++++|++|++.++..+++++.
T Consensus 152 ~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~~-- 229 (307)
T d1eq2a_ 152 RQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGV-- 229 (307)
T ss_dssp HHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHCC--
T ss_pred cccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhhcc--
Confidence 875 499999999999999642 344555555555433 344778889999999999999999998765
Q ss_pred CCceEEecCCccccHHHHHHHHHHHhhcCCccccCChHHHHHhhhHHHHHhhhCCCCCCCCCCCCHHHHHhhhcCcccCC
Q 047628 215 MGKIYELGGPDIFTVHELAELMYDTIREYPHYVKVPFPVAKAVAMPREILLKKVPFPLPRPGLFNLDEINAYTSDTIVSD 294 (327)
Q Consensus 215 ~~~~~~v~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (327)
.+.||+++++..|+.|+++.+.+..+. ..+...|. | ...... .......+
T Consensus 230 -~~~~~~~~~~~~si~~i~~~i~~~~~~-~~i~~~~~---------------------~------~~~~~~-~~~~~~~d 279 (307)
T d1eq2a_ 230 -SGIFNLGTGRAESFQAVADATLAYHKK-GQIEYIPF---------------------P------DKLKGR-YQAFTQAD 279 (307)
T ss_dssp -CEEEEESCSCCBCHHHHHHHC--------------------------------------------------CCCSCCBC
T ss_pred -ccccccccccchhHHHHHHHHHHhcCC-CCeeEeeC---------------------C------ccCCCC-CceeeecC
Confidence 469999999999999999999877652 22222220 0 000000 11122334
Q ss_pred CcccccccCCccc-cccCccHHHHHHH
Q 047628 295 NALTFQDLGIVPH-KLKGYPTEYLIWY 320 (327)
Q Consensus 295 ~~~~~~~lg~~p~-~~~~~l~~~~~~~ 320 (327)
.+|+++.+||+|. +++|+++++++|+
T Consensus 280 ~~k~~~~~~~~p~~sl~egi~~~i~w~ 306 (307)
T d1eq2a_ 280 LTNLRAAGYDKPFKTVAEGVTEYMAWL 306 (307)
T ss_dssp CHHHHHTTCCCCCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHhC
Confidence 4589999999997 9999999999996
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=7.9e-28 Score=196.89 Aligned_cols=188 Identities=16% Similarity=0.214 Sum_probs=142.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh-ccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM-AKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-~~~d~vi~~ 83 (327)
++||||||||||||++|+++|+++|+ +|.+++|++.... +++ ..+..+..++.+.+ .++|+||||
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~---------~~~---~~~~~d~~~~~~~~~~~~d~vi~~ 69 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEH---------PRL---DNPVGPLAELLPQLDGSIDTAFCC 69 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCC---------TTE---ECCBSCHHHHGGGCCSCCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhc---------ccc---cccccchhhhhhccccchheeeee
Confidence 47999999999999999999999997 6888887654421 123 33334444444443 458999999
Q ss_pred cccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCC-CeEEEecCe
Q 047628 84 IGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELP-WATIMRPAA 160 (327)
Q Consensus 84 a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~-~~~i~r~~~ 160 (327)
+|.... .....+...|+.++.+++++|++.+ +++|+++|+.+++....+.|..+|..+|+.+++.+. +++|+||+.
T Consensus 70 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~~~~~y~~~K~~~E~~l~~~~~~~~~I~Rp~~ 148 (212)
T d2a35a1 70 LGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSL 148 (212)
T ss_dssp CCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTTCSSHHHHHHHHHHHHHTTSCCSEEEEEECCS
T ss_pred eeeeccccccccccccchhhhhhhccccccccc-ccccccccccccccccccchhHHHHHHhhhccccccccceeeCCcc
Confidence 987532 3445788899999999999999998 999999999999988889999999999999999886 599999999
Q ss_pred eecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 161 MIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 161 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
+||+.+.+... . .......++. ...+.+||++|+|++++.+++++..
T Consensus 149 v~G~~~~~~~~--~-~~~~~~~~~~---~~~~~~i~v~DvA~ai~~~~~~~~~ 195 (212)
T d2a35a1 149 LFGPREEFRLA--E-ILAAPIARIL---PGKYHGIEACDLARALWRLALEEGK 195 (212)
T ss_dssp EESTTSCEEGG--G-GTTCCCC-------CHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred eeCCcccccHH--H-HHHHHHhhcc---CCCCcEEEHHHHHHHHHHHHcCCCC
Confidence 99987543110 0 1111112221 1346779999999999999988765
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.95 E-value=7.2e-28 Score=212.18 Aligned_cols=234 Identities=14% Similarity=0.079 Sum_probs=177.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh-hHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~~~~d~vi~~a~ 85 (327)
+++|+|||||||||++|+++|+++||+|++++|++++..... ....++++++++|+.|+ +.+..++.++|++++...
T Consensus 3 kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~--~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~ 80 (350)
T d1xgka_ 3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEE--LQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTT 80 (350)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHH--HHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhh--hcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeecc
Confidence 579999999999999999999999999999999887643211 11124799999999885 457778899999987754
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCC----CCchHHHhHHHHHHHHHhhCCCeEEEecCee
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSS----SPSRVFSTKAAAEEAVLRELPWATIMRPAAM 161 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~----~~~~y~~~K~~~E~~~~~~~~~~~i~r~~~~ 161 (327)
... ..+...+.+++++|+++| ++++++.||...... ...+|..+|...|+++++.+.+++++|++.+
T Consensus 81 ~~~--------~~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~vr~~~~ 151 (350)
T d1xgka_ 81 SQA--------GDEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPSTFVYAGIY 151 (350)
T ss_dssp STT--------SCHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTSSSCEEEEEECEE
T ss_pred ccc--------chhhhhhhHHHHHHHHhC-CCceEEEeeccccccCCcccchhhhhhHHHHHHHHHhhccCceeeeecee
Confidence 321 235677899999999999 888888888655322 2267889999999999999999999999998
Q ss_pred ecCCChh-HHHHHHH-Hhh-cCceeeecCCCceecceeH-HHHHHHHHHHhhcCC-CCCCceEEecCCccccHHHHHHHH
Q 047628 162 IGTEDRL-LNKWAQF-VKK-FNFFPLFGDGSTRIQPVYV-VDVAAAVTAALKDDG-TSMGKIYELGGPDIFTVHELAELM 236 (327)
Q Consensus 162 ~G~~~~~-~~~~~~~-~~~-~~~~~~~~~~~~~~~~i~~-~D~a~~~~~~l~~~~-~~~~~~~~v~~~~~~s~~el~~~i 236 (327)
++..... ...+... ... ...+..+.+++..+.++++ +|+++++..++..+. ...|++|++++ +.+|+.|+++.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~~~~g-~~~T~~eia~~l 230 (350)
T d1xgka_ 152 NNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTF-ETLSPVQVCAAF 230 (350)
T ss_dssp GGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEEEECS-EEECHHHHHHHH
T ss_pred eccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEEEEeC-CcCCHHHHHHHH
Confidence 8642110 0000000 011 1234455667788888886 799999999997643 12588999998 679999999999
Q ss_pred HHHhhcCCccccCChH
Q 047628 237 YDTIREYPHYVKVPFP 252 (327)
Q Consensus 237 ~~~~g~~~~~~~~~~~ 252 (327)
++.+|+++++.++|.+
T Consensus 231 ~~~~G~~v~~~~vp~~ 246 (350)
T d1xgka_ 231 SRALNRRVTYVQVPKV 246 (350)
T ss_dssp HHHHTSCEEEEECSSC
T ss_pred HHHHCCcceEEECCHH
Confidence 9999999888877753
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.95 E-value=7.5e-28 Score=200.99 Aligned_cols=219 Identities=16% Similarity=0.163 Sum_probs=166.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCE--EEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQ--VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~--V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|++|||||||||||+++++.|+++|++ |+++.|++++... +. .+++++.+|+.+.+.+.++++++|+|||++
T Consensus 3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-~~-----~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a 76 (252)
T d2q46a1 3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-IG-----GEADVFIGDITDADSINPAFQGIDALVILT 76 (252)
T ss_dssp CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-TT-----CCTTEEECCTTSHHHHHHHHTTCSEEEECC
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-cc-----CCcEEEEeeeccccccccccccceeeEEEE
Confidence 579999999999999999999999964 7777887654221 11 368999999999999999999999999999
Q ss_pred ccccc-----------------cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC-------chHHHhHH
Q 047628 85 GREYE-----------------TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP-------SRVFSTKA 140 (327)
Q Consensus 85 ~~~~~-----------------~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~-------~~y~~~K~ 140 (327)
+.... ........+|+.++.++++.+...+ .+++.+.|+...+.... ..|...+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 155 (252)
T d2q46a1 77 SAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDHPLNKLGNGNILVWKR 155 (252)
T ss_dssp CCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTCGGGGGGGCCHHHHHH
T ss_pred eeccccccccchhhhhhcccccccchhhhccccccceeecccccccc-ccccccccccccCCCCcccccccccchhhhhh
Confidence 76421 1123466788899999999999988 88999999877653322 45667777
Q ss_pred HHHHHHHhhCCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCceEE
Q 047628 141 AAEEAVLRELPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGKIYE 220 (327)
Q Consensus 141 ~~E~~~~~~~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~~~~ 220 (327)
..+.+....+++++++||+.+||+.......+ . ...... .....+++|++|+|++++.+++++.. .|++||
T Consensus 156 ~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~----~-~~~~~~---~~~~~~~i~~~Dva~a~~~~l~~~~~-~g~~~~ 226 (252)
T d2q46a1 156 KAEQYLADSGTPYTIIRAGGLLDKEGGVRELL----V-GKDDEL---LQTDTKTVPRADVAEVCIQALLFEEA-KNKAFD 226 (252)
T ss_dssp HHHHHHHHSSSCEEEEEECEEECSCTTSSCEE----E-ESTTGG---GGSSCCEEEHHHHHHHHHHHTTCGGG-TTEEEE
T ss_pred hhhhhhhcccccceeecceEEECCCcchhhhh----h-ccCccc---ccCCCCeEEHHHHHHHHHHHhCCccc-cCcEEE
Confidence 88888888899999999999999865432110 0 000111 12346789999999999999998887 789999
Q ss_pred ecCCc---cccHHHHHHHHHHHhh
Q 047628 221 LGGPD---IFTVHELAELMYDTIR 241 (327)
Q Consensus 221 v~~~~---~~s~~el~~~i~~~~g 241 (327)
++++. ..++.|+.+++++.++
T Consensus 227 i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 227 LGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp EEECCTTTSCCCCCHHHHHTTCCC
T ss_pred EeeCCCCCChhHHHHHHHHHHHHh
Confidence 98643 3667777777765543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=2.6e-19 Score=148.39 Aligned_cols=213 Identities=18% Similarity=0.116 Sum_probs=153.5
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---c
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---A 77 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~ 77 (327)
|.+.++.+++|||||++-||+++++.|+++|++|.+.+|+.++......+. +++..+.+|++|+++++++++. +
T Consensus 1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~g~i 77 (244)
T d1pr9a_ 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC---PGIEPVCVDLGDWEATERALGSVGPV 77 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHHHHHhCCc
Confidence 677778899999999999999999999999999999999876543333332 3588899999999999888764 6
Q ss_pred cEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||....... ...+++|+.++..+.+++.. .+.-.++|++||.......| ..|+.+|.+.+
T Consensus 78 DilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~ 157 (244)
T d1pr9a_ 78 DLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALD 157 (244)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred eEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHH
Confidence 999999987543211 34678888887777775432 22135899999987654444 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCC-hh--HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTED-RL--LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.+.. ++++..+.||.+..+.. .. -........+ ..|+ -.+...+|+|.+++.++.+...
T Consensus 158 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~--~~pl-------~R~~~peevA~~v~fL~S~~a~ 228 (244)
T d1pr9a_ 158 MLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLN--RIPL-------GKFAEVEHVVNAILFLLSDRSG 228 (244)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHT--TCTT-------CSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHh--cCCC-------CCCcCHHHHHHHHHHHhCchhC
Confidence 887754 48999999998863310 00 0111111221 1221 2356789999999998865432
Q ss_pred -CCCceEEecCCc
Q 047628 214 -SMGKIYELGGPD 225 (327)
Q Consensus 214 -~~~~~~~v~~~~ 225 (327)
..|+++.+.|+-
T Consensus 229 ~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 229 MTTGSTLPVEGGF 241 (244)
T ss_dssp TCCSCEEEESTTG
T ss_pred CcCCcEEEECccH
Confidence 278999998863
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.82 E-value=2.9e-19 Score=147.83 Aligned_cols=209 Identities=12% Similarity=0.045 Sum_probs=149.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++.++++||||++-||+++++.|+++|++|.+.+|+.++.....+.. +.+.+.+|+++++++.++++ .
T Consensus 2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 77 (242)
T d1ulsa_ 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV----GAHPVVMDVADPASVERGFAEALAHLGR 77 (242)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 356789999999999999999999999999999999866543333332 47889999999998887764 4
Q ss_pred ccEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCC-CCchHHHhHHHHH
Q 047628 77 ANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSS-SPSRVFSTKAAAE 143 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~-~~~~y~~~K~~~E 143 (327)
+|++||+||....... ...+++|+.++..+.+++.. .+ -..++.+||...... ....|+.+|.+++
T Consensus 78 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~~~~~~~~~~~Y~asKaal~ 156 (242)
T d1ulsa_ 78 LDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVYLGNLGQANYAASMAGVV 156 (242)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGGGGCCTTCHHHHHHHHHHH
T ss_pred ceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeeccccccCCCCCcchHHHHHHHH
Confidence 7999999997543211 34778899888888877643 23 346777777543322 3378999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++..+.||.+--+.. .............-++ ..+...+|+|.+++.++.+... .
T Consensus 157 ~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl---------~R~~~pedia~~v~fL~S~~s~~i 227 (242)
T d1ulsa_ 157 GLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPL---------GRAGKPLEVAYAALFLLSDESSFI 227 (242)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTT---------CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhchhhCCC
Confidence 887754 48999999998865422 1222223333322222 1245679999999998865432 2
Q ss_pred CCceEEecCCcc
Q 047628 215 MGKIYELGGPDI 226 (327)
Q Consensus 215 ~~~~~~v~~~~~ 226 (327)
.|+++.+.++.+
T Consensus 228 tG~~i~vDGG~t 239 (242)
T d1ulsa_ 228 TGQVLFVDGGRT 239 (242)
T ss_dssp CSCEEEESTTTT
T ss_pred CCcEEEECCCcc
Confidence 799999998754
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.81 E-value=3.4e-19 Score=148.82 Aligned_cols=214 Identities=14% Similarity=0.111 Sum_probs=154.2
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++.++++||||++-||+++++.|+++|++|.+.+|+.+.......+.+ .++..+.+|+++++++.++++ .
T Consensus 2 ~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 79 (256)
T d1k2wa_ 2 RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG--PAACAIALDVTDQASIDRCVAELLDRWGS 79 (256)
T ss_dssp TTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence 3567999999999999999999999999999999998766554444444 468899999999998887764 4
Q ss_pred ccEEEEccccccccCc--------chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||....... ...+++|+.++..+.+++. +.++-.++|++||.......| ..|+.+|.++
T Consensus 80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal 159 (256)
T d1k2wa_ 80 IDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAV 159 (256)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred ccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHH
Confidence 7999999997543211 3467889988888877542 222135899999987665444 6899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHH-----------HHHhhcCceeeecCCCceecceeHHHHHHH
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWA-----------QFVKKFNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
+.+.+.. ++++..+.||.+-.+... ....+. ..+... .|+ ..+...+|+|.+
T Consensus 160 ~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Pl-------gR~~~p~evA~~ 230 (256)
T d1k2wa_ 160 ISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAA--VPF-------GRMGRAEDLTGM 230 (256)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHH--STT-------SSCBCHHHHHHH
T ss_pred HHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhc--CCC-------CCCcCHHHHHHH
Confidence 9888654 489999999988644211 111111 011100 111 235677999999
Q ss_pred HHHHhhcCCC-CCCceEEecCCcccc
Q 047628 204 VTAALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 204 ~~~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
++.++..... ..|+++.+.|+..+|
T Consensus 231 v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 231 AIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp HHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred HHHHhCchhCCccCceEEECcchhhC
Confidence 9998865432 279999999987654
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.81 E-value=3.6e-19 Score=146.68 Aligned_cols=201 Identities=18% Similarity=0.178 Sum_probs=143.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.+++++|||||++-||+++++.|++.|++|.+..|+.+... ++..+++|++|++++.++++ .
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~----------~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 73 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------GLFGVEVDVTDSDAVDRAFTAVEEHQGP 73 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhc----------CceEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 456799999999999999999999999999999999876542 47788999999998877664 4
Q ss_pred ccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||...... . ...+++|+.++..+.+++ ++.+ -.++|++||.......+ ..|+.+|.++
T Consensus 74 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~asKaal 152 (237)
T d1uzma1 74 VEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGV 152 (237)
T ss_dssp CSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHHHHHH
T ss_pred ceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcccHHHHHHHHHH
Confidence 799999999753311 1 346788988877776644 4555 56999999987654333 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
+.+.+.. ++++..+.||.+.-+... .-........+ ..|+ ..+...+|+|.+++.++.....
T Consensus 153 ~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~--~~pl-------~R~~~pedvA~~v~fL~S~~s~~ 223 (237)
T d1uzma1 153 IGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQ--FIPA-------KRVGTPAEVAGVVSFLASEDASY 223 (237)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGG--GCTT-------CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHh--cCCC-------CCCcCHHHHHHHHHHHhCchhcC
Confidence 9887654 489999999988632110 01111122221 1221 2346779999999998865432
Q ss_pred CCCceEEecCC
Q 047628 214 SMGKIYELGGP 224 (327)
Q Consensus 214 ~~~~~~~v~~~ 224 (327)
..|+++.+.|+
T Consensus 224 itG~~i~vdGG 234 (237)
T d1uzma1 224 ISGAVIPVDGG 234 (237)
T ss_dssp CCSCEEEESTT
T ss_pred CcCCeEEECCC
Confidence 27899999886
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.81 E-value=4.6e-19 Score=146.55 Aligned_cols=210 Identities=19% Similarity=0.145 Sum_probs=151.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc---ccEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK---ANVV 80 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~---~d~v 80 (327)
+.+.|++|||||++-||+++++.|+++|++|.+.+|+.++......+. +++..+.+|++++++++++++. +|++
T Consensus 2 dl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~g~iDil 78 (242)
T d1cyda_ 2 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC---PGIEPVCVDLGDWDATEKALGGIGPVDLL 78 (242)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS---TTCEEEECCTTCHHHHHHHHTTCCCCSEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHHHHHcCCCeEE
Confidence 466799999999999999999999999999999999876543333332 3688999999999999988874 6999
Q ss_pred EEccccccccC-----c---chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 81 INLIGREYETR-----N---YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 81 i~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
||+||...... . ...+++|+.++..+.+++.. .+.-.++|.+||.......| ..|+.+|.+++.+.
T Consensus 79 VnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt 158 (242)
T d1cyda_ 79 VNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLT 158 (242)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHH
T ss_pred EECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHH
Confidence 99999753321 1 34678899888888776532 22135899999987665554 78999999999988
Q ss_pred Hhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CC
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SM 215 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~ 215 (327)
+.. ++++..+.||.+-.+..... +.+.....+. .|+ ..+...+|+|++++.++..... ..
T Consensus 159 ~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~--~pl-------~R~~~peeva~~v~fL~S~~s~~it 229 (242)
T d1cyda_ 159 KAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKER--HPL-------RKFAEVEDVVNSILFLLSDRSASTS 229 (242)
T ss_dssp HHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHH--STT-------SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCchhcCcC
Confidence 764 48999999998853210000 1122222221 111 2346679999999998865432 27
Q ss_pred CceEEecCCc
Q 047628 216 GKIYELGGPD 225 (327)
Q Consensus 216 ~~~~~v~~~~ 225 (327)
|+++.+.|+-
T Consensus 230 G~~i~vDGG~ 239 (242)
T d1cyda_ 230 GGGILVDAGY 239 (242)
T ss_dssp SSEEEESTTG
T ss_pred CceEEeCcch
Confidence 8999999864
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.80 E-value=1.6e-18 Score=144.80 Aligned_cols=216 Identities=18% Similarity=0.130 Sum_probs=153.0
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc-
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
|-.+++.++++||||++-||++++++|+++|++|.+..|+.+..... +...+ .++..+++|+++++++.++++
T Consensus 1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g--~~~~~~~~Dvt~~~~v~~~~~~ 78 (261)
T d1geea_ 1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG--GEAIAVKGDVTVESDVINLVQS 78 (261)
T ss_dssp CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHH
Confidence 55567889999999999999999999999999999999986542222 22222 468899999999998877764
Q ss_pred ------cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chH
Q 047628 76 ------KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRV 135 (327)
Q Consensus 76 ------~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y 135 (327)
.+|++||+||...... . ...+++|+.++..+.+++ ++.+.-.++|++||.......| ..|
T Consensus 79 ~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y 158 (261)
T d1geea_ 79 AIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHY 158 (261)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHH
T ss_pred HHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcccccc
Confidence 4799999999754321 1 346788988887777665 3343123588899976654444 789
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChh-H--HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHH
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL-L--NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVT 205 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~ 205 (327)
+.+|.+++.+.+.. ++++..+.||.+..+.... . +.......+ ..|+ ..+...+|+|++++
T Consensus 159 ~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~--~~pl-------~R~~~pediA~~v~ 229 (261)
T d1geea_ 159 AASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVES--MIPM-------GYIGEPEEIAAVAA 229 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHT--TCTT-------SSCBCHHHHHHHHH
T ss_pred ccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHh--cCCC-------CCCCCHHHHHHHHH
Confidence 99999999887754 4999999999886432111 1 111111221 1221 23456799999999
Q ss_pred HHhhcCCC-CCCceEEecCCccc
Q 047628 206 AALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 206 ~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
.++..... ..|+++.+.++.++
T Consensus 230 fL~S~~s~~itG~~i~vDGG~sl 252 (261)
T d1geea_ 230 WLASSEASYVTGITLFADGGMTL 252 (261)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHhCchhcCCcCCeEEECCCeeC
Confidence 98865432 27999999998654
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.80 E-value=7.7e-19 Score=146.02 Aligned_cols=211 Identities=13% Similarity=0.017 Sum_probs=150.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++.+++|||||++-||++++++|+++|++|.+.+|+.++.....++.+ .++.++++|+++++++.++++ .
T Consensus 2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (254)
T d1hdca_ 2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGS 79 (254)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG--GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence 3567899999999999999999999999999999998766554444443 468899999999998887764 4
Q ss_pred ccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||...... . ...+++|+.++..+.+++. +.+ -.++|++||.......| ..|+.+|.++
T Consensus 80 iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaal 158 (254)
T d1hdca_ 80 VDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGV 158 (254)
T ss_dssp CCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred ccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccchhhHHHHHHHH
Confidence 799999999854321 1 2467889988888877663 344 46999999987654444 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCcee-cc-eeHHHHHHHHHHHhhcCC-
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRI-QP-VYVVDVAAAVTAALKDDG- 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-i~~~D~a~~~~~~l~~~~- 212 (327)
+.+.+.. ++++..+.||.+.. ..... .......-.. ...+. .+ ...+|+|++++.++.+..
T Consensus 159 ~~lt~~lA~e~a~~gIrVN~I~PG~v~T---~~~~~---~~~~~~~~~~---~~~pl~R~g~~PedvA~~v~fL~S~~a~ 229 (254)
T d1hdca_ 159 RGLSKLAAVELGTDRIRVNSVHPGMTYT---PMTAE---TGIRQGEGNY---PNTPMGRVGNEPGEIAGAVVKLLSDTSS 229 (254)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC---HHHHH---HTCCCSTTSC---TTSTTSSCB-CHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHhCCCceEEEEeeeCcccC---ccchh---cCHHHHHHHH---hCCCCCCCCCCHHHHHHHHHHHhchhhC
Confidence 9888754 48999999998852 22211 1110000000 00111 12 247999999999986543
Q ss_pred CCCCceEEecCCcc
Q 047628 213 TSMGKIYELGGPDI 226 (327)
Q Consensus 213 ~~~~~~~~v~~~~~ 226 (327)
...|+++.+.++-+
T Consensus 230 ~itG~~i~vDGG~t 243 (254)
T d1hdca_ 230 YVTGAELAVDGGWT 243 (254)
T ss_dssp TCCSCEEEESTTTT
T ss_pred CCCCceEEeCCCcc
Confidence 22799999998754
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.80 E-value=1.5e-19 Score=149.58 Aligned_cols=209 Identities=16% Similarity=0.152 Sum_probs=149.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.++++||||++-||+++++.|+++|++|.+.+|+.+......++.+ .+...+.+|+++++++.++++ .+
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 79 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG--ANGKGLMLNVTDPASIESVLEKIRAEFGEV 79 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC--CCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence 457899999999999999999999999999999998765443333333 357889999999988877764 47
Q ss_pred cEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCC--CchHHHhHHHHH
Q 047628 78 NVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSS--PSRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E 143 (327)
|++||+||...... . ...+++|+.++..+.+++ ++.+ -.++|++||....... ...|+.+|.+++
T Consensus 80 DilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaal~ 158 (243)
T d1q7ba_ 80 DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGGQANYAAAKAGLI 158 (243)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHHHHH
T ss_pred ceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCCCHHHHHHHHHHH
Confidence 99999998753321 1 346788998888887766 3444 3589999997654333 378999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++..+.||.+-.+.. .........+.+. .|+ ..+...+|+|.+++.++..... .
T Consensus 159 ~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~--~pl-------~R~~~pedvA~~v~fL~S~~s~~i 229 (243)
T d1q7ba_ 159 GFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQ--VPA-------GRLGGAQEIANAVAFLASDEAAYI 229 (243)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTT--CTT-------SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhc--CCC-------CCCCCHHHHHHHHHHHhCchhcCC
Confidence 888764 48999999998753210 1111111222211 221 2346789999999999865432 2
Q ss_pred CCceEEecCCc
Q 047628 215 MGKIYELGGPD 225 (327)
Q Consensus 215 ~~~~~~v~~~~ 225 (327)
.|+++.+.|+-
T Consensus 230 tGq~i~vdGG~ 240 (243)
T d1q7ba_ 230 TGETLHVNGGM 240 (243)
T ss_dssp CSCEEEESTTS
T ss_pred cCCeEEECCCe
Confidence 78999998864
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=6.7e-20 Score=153.01 Aligned_cols=212 Identities=13% Similarity=0.108 Sum_probs=153.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc---CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM---GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~---~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+.+.+|||||++-||+++++.|+++|++|.+++|+.++.......+ ....++.++.+|+++++++.++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999876543332222 112468889999999998887764
Q ss_pred cccEEEEccccccccCcchhHhhhhHHHHHHHHHHHH----cC--CcceEEEEeccCCCCCCC--chHHHhHHHHHHHHH
Q 047628 76 KANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKE----HG--GIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVL 147 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~ 147 (327)
.+|++||+||.....+-+..+++|+.++.++..++.. .. .-.++|.+||.......| ..|+.+|.+++.+.+
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr 161 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTR 161 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHH
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHH
Confidence 4799999999877666567888999887777666543 21 124699999987654444 679999999887755
Q ss_pred h---------hCCCeEEEecCeeecCCChhHHHHH------------HHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 148 R---------ELPWATIMRPAAMIGTEDRLLNKWA------------QFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 148 ~---------~~~~~~i~r~~~~~G~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
. .++++..+.||.+-- .++..+. ..+.. ..+. ..+...+|+|++++.
T Consensus 162 s~ala~e~~~~gIrVN~I~PG~i~T---~~~~~~~~~~~~~~~~~~~~~~~~--~~p~-------~r~~~pedvA~~v~f 229 (254)
T d2gdza1 162 SAALAANLMNSGVRLNAICPGFVNT---AILESIEKEENMGQYIEYKDHIKD--MIKY-------YGILDPPLIANGLIT 229 (254)
T ss_dssp HHHHHHHHHTCCEEEEEEEESCBSS---HHHHGGGCHHHHGGGGGGHHHHHH--HHHH-------HCCBCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEEEcCCCCC---hhhhhccccccccccHHHHHHHHh--cCCC-------CCCcCHHHHHHHHHH
Confidence 2 248899999998742 1111110 00100 0111 134567999999999
Q ss_pred HhhcCCCCCCceEEecCCccccHH
Q 047628 207 ALKDDGTSMGKIYELGGPDIFTVH 230 (327)
Q Consensus 207 ~l~~~~~~~~~~~~v~~~~~~s~~ 230 (327)
++.++.. .|+++.+.++..+.++
T Consensus 230 L~s~~~i-tG~~i~VdGG~~~~~~ 252 (254)
T d2gdza1 230 LIEDDAL-NGAIMKITTSKGIHFQ 252 (254)
T ss_dssp HHHCTTC-SSCEEEEETTTEEEEC
T ss_pred HHcCCCC-CCCEEEECCCCeeecc
Confidence 9987765 8999999998876554
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.80 E-value=9.5e-19 Score=144.61 Aligned_cols=206 Identities=17% Similarity=0.084 Sum_probs=150.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.++++||||++-||+++++.|+++|++|.+.+|++++......+.+ .++.++++|+++++++.++++ .+
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 81 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA--DAARYVHLDVTQPAQWKAAVDTAVTAFGGL 81 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG--GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--CcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 467899999999999999999999999999999998766544444333 368889999999998877664 47
Q ss_pred cEEEEccccccccCc--------chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETRN--------YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||......- ...+++|+.++..+.+++ ++.+ -.++|++||.......+ ..|+.+|.+++
T Consensus 82 dilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~ 160 (244)
T d1nffa_ 82 HVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFAVR 160 (244)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred eEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccccccchhhHHHHHH
Confidence 999999998543211 346788998888887755 3343 35899999987754444 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CC
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SM 215 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~ 215 (327)
.+.+.. ++++..+.||.+-.+....+. ......+ ...+...+|+|++++.++..... ..
T Consensus 161 ~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~------~~~~~~p-------l~R~~~p~diA~~v~fL~s~~s~~it 227 (244)
T d1nffa_ 161 GLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP------EDIFQTA-------LGRAAEPVEVSNLVVYLASDESSYST 227 (244)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC------TTCSCCS-------SSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHhcccCEEEEEEeeCCccChhHhhhh------HHHHhcc-------ccCCCCHHHHHHHHHHHhChhhCCCc
Confidence 888754 489999999988533111000 0001111 12367889999999999865432 27
Q ss_pred CceEEecCCcc
Q 047628 216 GKIYELGGPDI 226 (327)
Q Consensus 216 ~~~~~v~~~~~ 226 (327)
|+++.+.++..
T Consensus 228 G~~i~vDGG~~ 238 (244)
T d1nffa_ 228 GAEFVVDGGTV 238 (244)
T ss_dssp SCEEEESTTGG
T ss_pred CCEEEECCCee
Confidence 99999998754
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.79 E-value=4.4e-19 Score=147.60 Aligned_cols=210 Identities=14% Similarity=0.056 Sum_probs=149.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.++.+|||||++-||+++++.|+++|++|.+.+|+.+.......+.. ...++..+.+|+++++++.++++ .
T Consensus 8 lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~ 87 (251)
T d2c07a1 8 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 87 (251)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 557899999999999999999999999999999998765433222221 11468899999999998887764 4
Q ss_pred ccEEEEccccccccC----c----chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCC--CchHHHhHHHH
Q 047628 77 ANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSS--PSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~ 142 (327)
+|++||+|+...... . ...+++|+.++..+.+++ ++.+ -.++|++||....... ...|+.+|.++
T Consensus 88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaal 166 (251)
T d2c07a1 88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKAGV 166 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCCCHHHHHHHHHH
Confidence 799999998754321 1 346778888877777754 3444 4699999997654333 37899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT- 213 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~- 213 (327)
+.+.+.. ++++..+.||.+-.+.. ............. .|+ ..+...+|+|++++.++.....
T Consensus 167 ~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~--~pl-------~R~~~pedvA~~v~fL~S~~s~~ 237 (251)
T d2c07a1 167 IGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISN--IPA-------GRMGTPEEVANLACFLSSDKSGY 237 (251)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTT--CTT-------SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCchhCC
Confidence 9988754 48999999998865421 1222333333222 221 1356779999999998865442
Q ss_pred CCCceEEecCC
Q 047628 214 SMGKIYELGGP 224 (327)
Q Consensus 214 ~~~~~~~v~~~ 224 (327)
..|+++.+.|+
T Consensus 238 itG~~i~vDGG 248 (251)
T d2c07a1 238 INGRVFVIDGG 248 (251)
T ss_dssp CCSCEEEESTT
T ss_pred CcCcEEEECCC
Confidence 27899999886
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.79 E-value=3.3e-18 Score=141.89 Aligned_cols=211 Identities=14% Similarity=0.104 Sum_probs=146.4
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch-hhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
.++.+.++||||++-||+++++.|+++|++|.+.+|++.... ..++..+ .++..+.+|++|++++.++++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dvs~~~~v~~~~~~~~~~~G 79 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG--RRVLTVKCDVSQPGDVEAFGKQVISTFG 79 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcC--CcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 356789999999999999999999999999999999875432 2233333 468899999999998887654
Q ss_pred cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
.+|++||+||...... . ...+++|+.++..+.+++ ++.+ -.++|++||.......| ..|+.+|.+
T Consensus 80 ~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKaa 158 (247)
T d2ew8a1 80 RCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAA 158 (247)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcccccchhhhcc
Confidence 4799999999854321 1 357788988888877765 3444 46899999987654444 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCCh--hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDR--LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
++.+.+.. ++++..+.||.+-.+... .......... ....+ .-.+...+|+|++++.++....
T Consensus 159 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~-~~~~~-------l~r~~~pedvA~~v~fL~S~~s 230 (247)
T d2ew8a1 159 NIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLP-NMLQA-------IPRLQVPLDLTGAAAFLASDDA 230 (247)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTTSS-------SCSCCCTHHHHHHHHHHTSGGG
T ss_pred HHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHH-HHhcc-------CCCCCCHHHHHHHHHHHhCchh
Confidence 98887654 489999999988643211 0011010000 00001 1134567999999999987543
Q ss_pred C-CCCceEEecCCc
Q 047628 213 T-SMGKIYELGGPD 225 (327)
Q Consensus 213 ~-~~~~~~~v~~~~ 225 (327)
. ..|+++.+.++-
T Consensus 231 ~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 231 SFITGQTLAVDGGM 244 (247)
T ss_dssp TTCCSCEEEESSSC
T ss_pred cCCcCCeEEECCCE
Confidence 2 278999998863
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.79 E-value=1.1e-18 Score=145.24 Aligned_cols=211 Identities=14% Similarity=0.129 Sum_probs=149.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
++.+++|||||++-||+++++.|+++|++|.+.+|+.+......+......++.++.+|++|++++.++++ .+
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 56799999999999999999999999999999999876544433333333578999999999998877664 47
Q ss_pred cEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||...... . ...+++|+.++..+.+++.. .+.-.++|++||.......| ..|+.+|.+++
T Consensus 84 DiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~ 163 (251)
T d1zk4a1 84 STLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVR 163 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHH
T ss_pred eEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHh
Confidence 99999998854321 1 24778899998888887643 33113789999976654444 68999999887
Q ss_pred HHHHh---------hCCCeEEEecCeeecCCChhHHHHH---HHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 144 EAVLR---------ELPWATIMRPAAMIGTEDRLLNKWA---QFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 144 ~~~~~---------~~~~~~i~r~~~~~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
.+.+. .++++..+.||.+-.+ ....+. .........|+ -.+...+|+|.+++.++...
T Consensus 164 ~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~---~~~~~~~~~~~~~~~~~~pl-------~R~~~pedvA~~v~fL~S~~ 233 (251)
T d1zk4a1 164 IMSKSAALDCALKDYDVRVNTVHPGYIKTP---LVDDLPGAEEAMSQRTKTPM-------GHIGEPNDIAYICVYLASNE 233 (251)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEECCBCCH---HHHTSTTHHHHHTSTTTCTT-------SSCBCHHHHHHHHHHHHSGG
T ss_pred cchHHHHHHHhcCCCcEEEEEEeCCCCCCh---hHHhcCCHHHHHHHHhCCCC-------CCCcCHHHHHHHHHHHhCch
Confidence 66542 2488999999988532 111110 00000111111 23567899999999988654
Q ss_pred CC-CCCceEEecCCc
Q 047628 212 GT-SMGKIYELGGPD 225 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~ 225 (327)
.. ..|+.+.+.|+-
T Consensus 234 s~~itG~~i~vDGG~ 248 (251)
T d1zk4a1 234 SKFATGSEFVVDGGY 248 (251)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hCCCcCcEEEECccc
Confidence 32 278999998863
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.79 E-value=4.3e-18 Score=141.42 Aligned_cols=212 Identities=17% Similarity=0.122 Sum_probs=149.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+++.++++||||++-||+++++.|+++|++|.+.+|+.++......+.. ...++..+++|+++++++.++++
T Consensus 2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 81 (251)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4668999999999999999999999999999999998765433222210 01368889999999998877664
Q ss_pred -cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCC-CCC--chHHHhH
Q 047628 76 -KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASS-SSP--SRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~-~~~--~~y~~~K 139 (327)
.+|++||+||...... . ...+++|+.++..+.+++.. .+ -.++|++||..... ..+ ..|+.+|
T Consensus 82 g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~~~~~~Y~asK 160 (251)
T d1vl8a_ 82 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAASK 160 (251)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccCccccchHHHH
Confidence 4799999999753321 1 34678899888888877543 33 35899998865432 233 6899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+++.+.+.. ++++..+.||.+-.+..... +.......+.-++ ..+...+|+|++++.++.
T Consensus 161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl---------~R~~~pedvA~~v~fL~S 231 (251)
T d1vl8a_ 161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL---------GRTGVPEDLKGVAVFLAS 231 (251)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT---------SSCBCGGGGHHHHHHHHS
T ss_pred HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCC---------CCCCCHHHHHHHHHHHhC
Confidence 9999888654 49999999998865432211 1122222222111 123456899999998886
Q ss_pred cCCC-CCCceEEecCCc
Q 047628 210 DDGT-SMGKIYELGGPD 225 (327)
Q Consensus 210 ~~~~-~~~~~~~v~~~~ 225 (327)
.... ..|+++.+.++-
T Consensus 232 ~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 232 EEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp GGGTTCCSCEEEESTTG
T ss_pred chhCCCcCcEEEeCcCe
Confidence 5432 278999998874
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.79 E-value=2.1e-18 Score=143.03 Aligned_cols=215 Identities=13% Similarity=0.062 Sum_probs=148.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
.+.+++|||||++-||+++++.|+++|++|.+.+|+.+.. +..+.. +..++++|+++++++.++++ .+
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 77 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI----GGAFFQVDLEDERERVRFVEEAAYALGRV 77 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc----CCeEEEEeCCCHHHHHHHHHHHHHhcCCC
Confidence 3568999999999999999999999999999999987642 222222 35778999999988877664 47
Q ss_pred cEEEEccccccccCc--------chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHH
Q 047628 78 NVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAE 143 (327)
Q Consensus 78 d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E 143 (327)
|++||+||....... ...+++|+.++.++.+++. +.+ -.++|++||.......| ..|+.+|.+++
T Consensus 78 DiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKaal~ 156 (248)
T d2d1ya1 78 DVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLV 156 (248)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHHHHH
T ss_pred CeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccccccchhHHHHHHHH
Confidence 999999997543221 2467889999888888764 333 35899999987654444 78999999999
Q ss_pred HHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh-cCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-C
Q 047628 144 EAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK-FNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-S 214 (327)
Q Consensus 144 ~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~ 214 (327)
.+.+.. ++++..+.||.+-.+ ........... ........+......+...+|+|.+++.++..... .
T Consensus 157 ~ltk~lA~el~~~gIrVN~I~PG~v~T~---~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~i 233 (248)
T d2d1ya1 157 NLTRSLALDLAPLRIRVNAVAPGAIATE---AVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI 233 (248)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEECSBCCH---HHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred HHHHHHHHHhhhhCcEEEEEeeCCCCCc---hHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence 887653 489999999987522 11111000000 00000000001112356789999999998865432 3
Q ss_pred CCceEEecCCcccc
Q 047628 215 MGKIYELGGPDIFT 228 (327)
Q Consensus 215 ~~~~~~v~~~~~~s 228 (327)
.|+.+.+.|+-+-|
T Consensus 234 tG~~i~vDGG~tas 247 (248)
T d2d1ya1 234 TGAILPVDGGMTAS 247 (248)
T ss_dssp CSCEEEESTTGGGB
T ss_pred CCcEEEcCcCcccc
Confidence 79999999875543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.78 E-value=1.1e-18 Score=145.30 Aligned_cols=210 Identities=17% Similarity=0.208 Sum_probs=149.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.++++||||++-||++++++|+++|++|.+.+|+.++.... ++..+ .++..+++|+++++++.++++
T Consensus 9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g--~~~~~~~~Dvs~~~~~~~~~~~~~~~~ 86 (255)
T d1fmca_ 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLG--GQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999999987654332 22222 468899999999988877654
Q ss_pred -cccEEEEccccccccC----c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 -KANVVINLIGREYETR----N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~----~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
.+|++||+||...... . ...+++|+.++..+.+++. +.+ -.++|++||.......| ..|+.+|.+
T Consensus 87 g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~~~~Y~asKaa 165 (255)
T d1fmca_ 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAA 165 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred CCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccccccccchhHHHH
Confidence 4799999999753321 1 2467889888888777653 334 35889999976654444 789999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCC--ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTE--DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
++.+.+.. ++++..+.||.+-.+. ...-+.......+. .|+ ..+...+|+|++++.++....
T Consensus 166 l~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~--~pl-------~R~g~pedvA~~v~fL~S~~s 236 (255)
T d1fmca_ 166 ASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQH--TPI-------RRLGQPQDIANAALFLCSPAA 236 (255)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHT--CSS-------CSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCchh
Confidence 99887654 4899999999885321 00112222222222 221 134567999999999986543
Q ss_pred C-CCCceEEecCCcc
Q 047628 213 T-SMGKIYELGGPDI 226 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~ 226 (327)
. ..|+++.+.|+..
T Consensus 237 ~~itG~~i~vDGG~~ 251 (255)
T d1fmca_ 237 SWVSGQILTVSGGGV 251 (255)
T ss_dssp TTCCSCEEEESTTSC
T ss_pred cCCcCCEEEECcCcc
Confidence 2 2789999999753
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=2.1e-18 Score=143.09 Aligned_cols=208 Identities=14% Similarity=0.112 Sum_probs=147.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
.+.+++|||||++-||+++++.|+++|++|.+.+|+.+......++. +++.++.+|++|++++.++++ .+
T Consensus 4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~---~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i 80 (250)
T d1ydea1 4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL---PGAVFILCDVTQEDDVKTLVSETIRRFGRL 80 (250)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---CCCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 45789999999999999999999999999999999866543322222 368899999999998887764 47
Q ss_pred cEEEEccccccccC------c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC--CCchHHHhHHHH
Q 047628 78 NVVINLIGREYETR------N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS--SPSRVFSTKAAA 142 (327)
Q Consensus 78 d~vi~~a~~~~~~~------~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~ 142 (327)
|++||+||...... . ...+++|+.++..+.+++. +.+ .++|++||...... ....|+.+|.++
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~Ii~isS~~~~~~~~~~~~Y~asKaal 158 (250)
T d1ydea1 81 DCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ--GNVINISSLVGAIGQAQAVPYVATKGAV 158 (250)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCHHHHHCCTTCHHHHHHHHHH
T ss_pred CEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCC--CCCcccccccccccccCcchhHHHHhhH
Confidence 99999998642211 1 2467889988888877654 333 48999999765333 337899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCC--------ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTE--------DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+.+.+.. ++++..+.||.+--+. ......+..... . .|+ ..+...+|+|.+++.+
T Consensus 159 ~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~--~pl-------~R~g~p~eva~~v~fL 228 (250)
T d1ydea1 159 TAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGML-A--QPL-------GRMGQPAEVGAAAVFL 228 (250)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHH-T--STT-------SSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHh-c--CCC-------CCCCCHHHHHHHHHHH
Confidence 9887654 4999999999885210 000011111111 1 111 2356789999999998
Q ss_pred hhcCCCCCCceEEecCCccc
Q 047628 208 LKDDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 208 l~~~~~~~~~~~~v~~~~~~ 227 (327)
+.+.....|+++.+.++..+
T Consensus 229 ~Sda~~itG~~i~vDGG~~l 248 (250)
T d1ydea1 229 ASEANFCTGIELLVTGGAEL 248 (250)
T ss_dssp HHHCTTCCSCEEEESTTTTS
T ss_pred hCccCCCcCCeEEECCCccc
Confidence 86533337899999987543
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.78 E-value=3.5e-18 Score=142.56 Aligned_cols=218 Identities=14% Similarity=0.062 Sum_probs=150.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+.++++||||++-||+.+++.|+++|++|.+.+|+.++.... +...+...++..+++|++|++++.++++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999999999999987654322 2222222468889999999998887764
Q ss_pred cccEEEEccccccccC------c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 KANVVINLIGREYETR------N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~------~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
.+|++||+||...... . ...+++|+.++..+.+++. +.+ -.++|++||.......| ..|+.+|.
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKa 161 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAAKH 161 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHHHHH
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCCCchHHHHHHH
Confidence 4799999999643211 1 2477889998888887653 333 35899999987654444 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCc---eeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNF---FPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+++.+.+.. ++++..+.||.+..+ .............. ............+...+|+|.+++.++..
T Consensus 162 al~~lt~~lA~el~~~gIrVN~i~PG~v~T~---~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~ 238 (258)
T d1iy8a_ 162 GVVGLTRNSAVEYGRYGIRINAIAPGAIWTP---MVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSD 238 (258)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECSBCSH---HHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHhCccCceEEEEeeCcccCH---HHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCc
Confidence 998887654 499999999988532 22211111000000 00000000112356779999999999875
Q ss_pred CCC-CCCceEEecCCccc
Q 047628 211 DGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~ 227 (327)
... ..|+++.+.++.+-
T Consensus 239 ~s~~itG~~i~VDGG~sa 256 (258)
T d1iy8a_ 239 DASYVNATVVPIDGGQSA 256 (258)
T ss_dssp GGTTCCSCEEEESTTTTT
T ss_pred hhcCCcCceEEcCcchhc
Confidence 432 27899999987653
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.78 E-value=3.9e-18 Score=142.43 Aligned_cols=212 Identities=17% Similarity=0.072 Sum_probs=149.5
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+++.+++|||||++-||+++++.|+++|++|.+.+|+.++......+.. ...++..+.+|+++++++.++++
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFH 84 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhC
Confidence 4568999999999999999999999999999999998765433332221 12467889999999988776552
Q ss_pred -cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 -KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
.+|++||+||...... . ...+++|+.++..+.+++. +.+ -.++|++||.......| ..|+.+|.
T Consensus 85 ~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKa 163 (259)
T d2ae2a_ 85 GKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKG 163 (259)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccccccccchHHHHH
Confidence 3799999999753321 1 3477889988888777653 333 45899999976654444 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCC------ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTE------DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
+++.+.+.. ++++..+.||.+--+. +............. .|+ ..+...+|+|++++.+
T Consensus 164 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~pl-------~R~g~pedvA~~v~fL 234 (259)
T d2ae2a_ 164 AMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDR--CAL-------RRMGEPKELAAMVAFL 234 (259)
T ss_dssp HHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHT--STT-------CSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHH
Confidence 999888754 4899999999885321 11111111212211 111 1345679999999998
Q ss_pred hhcCCC-CCCceEEecCCc
Q 047628 208 LKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~ 225 (327)
+..... ..|+++.+.++-
T Consensus 235 ~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 235 CFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp HSGGGTTCCSCEEEESTTG
T ss_pred hCchhCCCcCcEEEECCCe
Confidence 875442 278999998864
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.78 E-value=3.3e-18 Score=143.12 Aligned_cols=217 Identities=16% Similarity=0.115 Sum_probs=149.7
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|.++.+.|++|||||++-||+++++.|+++|++|.+++|+.++..+..++.. ...++..+++|+++++++.++++
T Consensus 3 ~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (260)
T d1h5qa_ 3 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID 82 (260)
T ss_dssp EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHH
Confidence 4556778999999999999999999999999999999999877543332211 01468899999999998877764
Q ss_pred ----cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC---------
Q 047628 76 ----KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS--------- 130 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~--------- 130 (327)
.+|++||+||...... . ...+++|+.++..+.+++. +.+.-..++..|+......
T Consensus 83 ~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~ 162 (260)
T d1h5qa_ 83 ADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL 162 (260)
T ss_dssp HHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred HHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCc
Confidence 4799999998753321 1 2466889888877776543 2221345666666543321
Q ss_pred CCchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 131 SPSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 131 ~~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
....|+.+|.+.+.+.+.. ++++..+.||.+-.+.. .....+....... .|+ ..+...+|+|.
T Consensus 163 ~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~--~pl-------~R~g~pedvA~ 233 (260)
T d1h5qa_ 163 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASN--IPL-------NRFAQPEEMTG 233 (260)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHT--CTT-------SSCBCGGGGHH
T ss_pred cccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhc--CCC-------CCCcCHHHHHH
Confidence 2267999999998887653 48999999998854321 1122233323222 221 12455699999
Q ss_pred HHHHHhhcCCC-CCCceEEecCCcc
Q 047628 203 AVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 203 ~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
+++.++.+... ..|+++.+.|+..
T Consensus 234 ~v~fL~S~~s~~itG~~i~VDGG~~ 258 (260)
T d1h5qa_ 234 QAILLLSDHATYMTGGEYFIDGGQL 258 (260)
T ss_dssp HHHHHHSGGGTTCCSCEEEECTTGG
T ss_pred HHHHHhcchhCCCcCceEEECCCee
Confidence 99998865442 2789999998754
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.78 E-value=2.9e-18 Score=141.71 Aligned_cols=210 Identities=14% Similarity=0.045 Sum_probs=149.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
...+++|||||++.||+.+++.|+++|++|++..|+.++........+ .++.++++|+++++++.++++ .+
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i 80 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE--AEAIAVVADVSDPKAVEAVFAEALEEFGRL 80 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC--SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 356899999999999999999999999999999999876555555444 468889999999998877664 47
Q ss_pred cEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHHcCC-cceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 78 NVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKEHGG-IMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 78 d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~~~~-v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
|++||+|+....... ...+++|+.+...+.+++...-. -..++.+|+.+ ....| ..|+.+|.+.|.+.
T Consensus 81 DiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a-~~~~~~~~~Y~~sK~al~~lt 159 (241)
T d2a4ka1 81 HGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVA-GLGAFGLAHYAAGKLGVVGLA 159 (241)
T ss_dssp CEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCT-TCCHHHHHHHHHCSSHHHHHH
T ss_pred cEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccc-cccccCccccchhhHHHHHHH
Confidence 999999987533211 35678899999999888765431 22444444443 33333 78999999999998
Q ss_pred Hhh-------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC-CCCCc
Q 047628 147 LRE-------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-TSMGK 217 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-~~~~~ 217 (327)
+.. ++++.++.||.+-.+.. ...........+. .|+ ..+...+|+|++++.++.+.. ...|+
T Consensus 160 ~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~--~p~-------~r~~~p~dva~~v~fL~S~~s~~itG~ 230 (241)
T d2a4ka1 160 RTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGA--SPL-------GRAGRPEEVAQAALFLLSEESAYITGQ 230 (241)
T ss_dssp HHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHT--STT-------CSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred HHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhC--CCC-------CCCcCHHHHHHHHHHHhcchhCCCcCc
Confidence 764 38999999998853311 1112222222222 111 234577999999999997543 22789
Q ss_pred eEEecCCcc
Q 047628 218 IYELGGPDI 226 (327)
Q Consensus 218 ~~~v~~~~~ 226 (327)
++.+.++.+
T Consensus 231 ~i~vDGG~s 239 (241)
T d2a4ka1 231 ALYVDGGRS 239 (241)
T ss_dssp EEEESTTTT
T ss_pred eEEeCCCcc
Confidence 999998764
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.78 E-value=7.7e-18 Score=141.51 Aligned_cols=215 Identities=14% Similarity=0.090 Sum_probs=151.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
-+..+.+|||||++-||+.+++.|+++|++|++++|+.++......+......+.++.+|+++++++.++++ .
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 356799999999999999999999999999999999876654444444434568889999999998887764 4
Q ss_pred ccEEEEccccccccC-------c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCC-CC--chHHHhH
Q 047628 77 ANVVINLIGREYETR-------N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSS-SP--SRVFSTK 139 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~-------~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~-~~--~~y~~~K 139 (327)
+|++||+||...... . ...+++|+.++..+.+++. +.+ -.++|++||...... .+ ..|+.+|
T Consensus 83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~~Y~asK 161 (268)
T d2bgka1 83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATK 161 (268)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccccccccccchhH
Confidence 799999998643211 1 2356889888888877654 333 358899988755432 22 4799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCC-hh----HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHH
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTED-RL----LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAA 207 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~ 207 (327)
.+++.+.+.. ++++..+.||.+-.+.. .. -.......... ..+. ..+...+|+|++++.+
T Consensus 162 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~~-------gr~~~pedvA~~v~fL 233 (268)
T d2bgka1 162 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA-ANLK-------GTLLRAEDVADAVAYL 233 (268)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT-CSSC-------SCCCCHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhc-cccC-------CCCcCHHHHHHHHHHH
Confidence 9999888754 48999999998865421 11 11111111111 1111 1345679999999999
Q ss_pred hhcCCC-CCCceEEecCCccc
Q 047628 208 LKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 208 l~~~~~-~~~~~~~v~~~~~~ 227 (327)
+..... ..|+++.+.|+-+.
T Consensus 234 ~S~~s~~itGq~i~VDGG~t~ 254 (268)
T d2bgka1 234 AGDESKYVSGLNLVIDGGYTR 254 (268)
T ss_dssp HSGGGTTCCSCEEEESTTGGG
T ss_pred hChhhCCccCceEEECcCccc
Confidence 875432 27999999997543
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.77 E-value=1.5e-18 Score=144.85 Aligned_cols=214 Identities=16% Similarity=0.071 Sum_probs=139.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+++.++++||||++-||+.+++.|++.|++|.+++|+.++..+...+.. ...++..+.+|+++++++.++++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 84 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999998765433332221 12468899999999988766552
Q ss_pred c-ccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 K-ANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ~-~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+ +|++||+||...... . ...+++|+.++..+.+++ ++.+ -.++|++||.......+ ..|+.+|.
T Consensus 85 g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKa 163 (259)
T d1xq1a_ 85 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSATKG 163 (259)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHHHHHH
T ss_pred CCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-ccccccccccccccccccccccccccc
Confidence 3 799999999754321 1 346788998888777765 3344 45899999977654333 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCC-hhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTED-RLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
+++.+.+.. ++++..+.||.+-.+.. ... ......... ..| ...+...+|+|.+++.++...
T Consensus 164 al~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~--~~p-------l~R~~~pedvA~~v~fL~S~~ 234 (259)
T d1xq1a_ 164 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVIS--RKP-------LGRFGEPEEVSSLVAFLCMPA 234 (259)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------------CCGGGGHHHHHHHTSGG
T ss_pred chhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHh--CCC-------CCCCcCHHHHHHHHHHHhCch
Confidence 999887654 49999999998864321 111 111111111 111 123456799999999988644
Q ss_pred CC-CCCceEEecCCccc
Q 047628 212 GT-SMGKIYELGGPDIF 227 (327)
Q Consensus 212 ~~-~~~~~~~v~~~~~~ 227 (327)
.. ..|+.+.+.++-++
T Consensus 235 s~~iTG~~i~vDGG~s~ 251 (259)
T d1xq1a_ 235 ASYITGQTICVDGGLTV 251 (259)
T ss_dssp GTTCCSCEEECCCCEEE
T ss_pred hcCCcCcEEEeCCCEEC
Confidence 32 27899999887554
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.77 E-value=9.6e-18 Score=139.84 Aligned_cols=216 Identities=17% Similarity=0.080 Sum_probs=147.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~ 79 (327)
|.+|||||++-||++++++|+++|++|.+.+|+.++......+.. ...++..+++|+++++++.++++ .+|+
T Consensus 2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 81 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 81 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 456999999999999999999999999999998765433222211 11468899999999998887664 4799
Q ss_pred EEEccccccccC-----c---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 80 VINLIGREYETR-----N---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 80 vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
+||+||...... . ...+++|+.++..+.+++. +.+.-.++|++||.......| ..|+.+|.+.+.+
T Consensus 82 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 161 (255)
T d1gega_ 82 IVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGL 161 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHH
T ss_pred EEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhh
Confidence 999999753211 1 3477889999888887653 333235799999877654444 7899999999988
Q ss_pred HHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhh--cCce----eeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 146 VLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKK--FNFF----PLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 146 ~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
.+.. ++++..+.||.+-. +....+...... .... ...........+...+|+|++++.++....
T Consensus 162 tk~lA~el~~~gIrVN~I~PG~i~T---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a 238 (255)
T d1gega_ 162 TQTAARDLAPLGITVNGYCPGIVKT---PMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDS 238 (255)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBSS---HHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHHhhhhCcEEEEEecCcccC---hHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence 7654 48999999998742 222222211110 0000 000000111235678999999999886543
Q ss_pred C-CCCceEEecCCcc
Q 047628 213 T-SMGKIYELGGPDI 226 (327)
Q Consensus 213 ~-~~~~~~~v~~~~~ 226 (327)
. ..|+++.+.|+-.
T Consensus 239 ~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 239 DYMTGQSLLIDGGMV 253 (255)
T ss_dssp TTCCSCEEEESSSSS
T ss_pred CCccCcEEEecCCEE
Confidence 2 2789999998743
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.76 E-value=9.1e-18 Score=140.19 Aligned_cols=205 Identities=18% Similarity=0.127 Sum_probs=147.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------ccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~d 78 (327)
+|.+|||||++-||+++++.|+++|++|.+.+|+.+.......++. ...++..+++|+++++++.++++ .+|
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD 81 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 3678999999999999999999999999999998765433222211 11468899999999998887764 479
Q ss_pred EEEEccccccccCc--------chhHhhhhHHHHHHHHHHHH------cCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 79 VVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKE------HGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 79 ~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~------~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
++||+||....... ...+++|+.++..+.+++.. .+ -.++|.+||.......| ..|+.+|.++
T Consensus 82 ilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~~~~~Y~asKaal 160 (257)
T d2rhca1 82 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASKHGV 160 (257)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred EEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-CcccccccccccccccccchhHHHHHHHH
Confidence 99999997533211 35778999999999987753 33 45899999876654444 7899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCCChhHHHHH---------------HHHhhcCceeeecCCCceecceeHHHH
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWA---------------QFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
+.+.+.. ++++..+.||.+-. +....+. ..+.+ ..|+ ..+...+|+
T Consensus 161 ~~ltk~lA~el~~~gIrVN~I~PG~i~T---~~~~~~~~~~~~~~~~~~~e~~~~~~~--~~Pl-------gR~~~pedi 228 (257)
T d2rhca1 161 VGFTKALGLELARTGITVNAVCPGFVET---PMAASVREHYSDIWEVSTEEAFDRITA--RVPI-------GRYVQPSEV 228 (257)
T ss_dssp HHHHHHHHHHTTTSEEEEEEEEECSBCS---HHHHHHHHHHHHHTTCCHHHHHHHHHT--TSTT-------SSCBCHHHH
T ss_pred HHHHHHHHHHhhhhCcEEEEEeeCCCCC---HHHHHHHhhhhhhcccChHHHHHHHHh--cCCC-------CCCcCHHHH
Confidence 9888764 38899999998742 2221111 11111 1111 235678999
Q ss_pred HHHHHHHhhcCCC-CCCceEEecCC
Q 047628 201 AAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 201 a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
|++++.++..... ..|+++.+.|+
T Consensus 229 a~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 229 AEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHhCchhcCCcCceEEECcC
Confidence 9999999965432 27899999886
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.76 E-value=3.2e-18 Score=142.44 Aligned_cols=211 Identities=14% Similarity=0.057 Sum_probs=147.1
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++.++++||||++-||+++++.|+++|++|.+.+|+.+.......+.+ .+..++.+|+++++++.++++ .
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 80 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG--ERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC--TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC--CCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 3567899999999999999999999999999999998765444344443 357889999999988877664 4
Q ss_pred ccEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chHHHhHHHH
Q 047628 77 ANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~ 142 (327)
+|++||+||....... ...+++|+.++..+.+++.. .+ .++|++||.......| ..|+.+|.++
T Consensus 81 iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~--G~Iv~isS~~~~~~~~~~~~Y~asKaal 158 (253)
T d1hxha_ 81 LNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAAV 158 (253)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred CCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC--CceecccchhhhcCccccccccchhHHH
Confidence 6999999997543211 34778898888877776543 33 5899999987654444 6899999998
Q ss_pred HHHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcC---ceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 143 EEAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN---FFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 143 E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.+.+.. ++++..+.||.+..+ .... ...+.. ...........-.+...+|+|++++.++..
T Consensus 159 ~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~---~~~~---~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~ 232 (253)
T d1hxha_ 159 SALTRAAALSCRKQGYAIRVNSIHPDGIYTP---MMQA---SLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASD 232 (253)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEESEECCH---HHHH---HSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhhcCCCEEEEEEeECCCcCH---hHHh---hCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhCh
Confidence 8877532 278889999988522 1111 000000 000000000112456789999999998865
Q ss_pred CCC-CCCceEEecCC
Q 047628 211 DGT-SMGKIYELGGP 224 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~ 224 (327)
... ..|+++++.++
T Consensus 233 ~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 233 ESSVMSGSELHADNS 247 (253)
T ss_dssp GGTTCCSCEEEESSS
T ss_pred hhCCCcCcEEEECcc
Confidence 432 27899999886
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.76 E-value=1.2e-17 Score=139.37 Aligned_cols=213 Identities=16% Similarity=0.072 Sum_probs=150.0
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+++.+++|||||++-||++++++|+++|++|.+.+|++++.....+... ....+.++.+|+++++++.++++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 82 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999998765433222211 12467888999999988876653
Q ss_pred c-ccEEEEccccccccCc--------chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 76 K-ANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ~-~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+ .|+++|+||......- ...+++|+.++..+.+++. +.+ ..++|++||.......| ..|+.+|.
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~~~~~Y~~sK~ 161 (258)
T d1ae1a_ 83 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASKG 161 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred CCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccccccchhHHHHHH
Confidence 2 6999999987543211 3467888888888877654 334 56999999987755444 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCCC-hh------HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTED-RL------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
+++.+.+.. ++++..+.||.+..+.. .. .......+... .|+ ..+...+|+|.+++.
T Consensus 162 al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~pl-------gR~~~pediA~~v~f 232 (258)
T d1ae1a_ 162 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVK--TPM-------GRAGKPQEVSALIAF 232 (258)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHH--STT-------CSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHH
Confidence 999988764 48999999999864421 01 11122222211 111 125678999999999
Q ss_pred HhhcCCC-CCCceEEecCCcc
Q 047628 207 ALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~~ 226 (327)
++.+... ..|+.+.+.++-+
T Consensus 233 L~S~~s~~itG~~i~vDGG~s 253 (258)
T d1ae1a_ 233 LCFPAASYITGQIIWADGGFT 253 (258)
T ss_dssp HHSGGGTTCCSCEEEESTTGG
T ss_pred HhChhhCCCcCcEEEeCCCee
Confidence 9965432 2788999988643
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.76 E-value=6.4e-18 Score=141.40 Aligned_cols=219 Identities=15% Similarity=0.101 Sum_probs=145.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
++.+++|||||++-||+++++.|+++|++|.+..|+.....+. +.... ..++.++.+|+++++++.++++
T Consensus 2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~-g~~~~~~~~Dv~~~~~v~~~~~~~~~~ 80 (260)
T d1x1ta1 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQH-GVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHH-TSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhc-CCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999986432221 11111 1368889999999998887764
Q ss_pred --cccEEEEccccccccCc--------chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
.+|++||+||......- ...+++|+.++..+.+++ ++.+ -.++|++||.......| ..|+.+|
T Consensus 81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK 159 (260)
T d1x1ta1 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAK 159 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred hCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCCcchhhhhh
Confidence 47999999997543211 347788888877776654 4444 45999999987654444 6899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCC-ChhHHHHHHHH--hhcC-ceeeecCCCceecceeHHHHHHHHHHHh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTE-DRLLNKWAQFV--KKFN-FFPLFGDGSTRIQPVYVVDVAAAVTAAL 208 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~-~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~l 208 (327)
.+++.+.+.. ++++..+.||.+--+. +..+....... .... .............+...+|+|++++.++
T Consensus 160 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~ 239 (260)
T d1x1ta1 160 HGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLA 239 (260)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHH
T ss_pred hhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 9999887654 3899999999885331 11111100000 0000 0000000001123567899999999988
Q ss_pred hcCCC-CCCceEEecCCc
Q 047628 209 KDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 209 ~~~~~-~~~~~~~v~~~~ 225 (327)
..... ..|+++.+.|+-
T Consensus 240 S~~a~~itG~~i~vDGG~ 257 (260)
T d1x1ta1 240 SDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp SGGGTTCCSCEEEESTTG
T ss_pred ChhhCCCcCCEEEECcch
Confidence 65432 378999999863
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.76 E-value=8e-18 Score=140.67 Aligned_cols=207 Identities=14% Similarity=0.110 Sum_probs=146.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
++.+++|||||++-||+++++.|+++|++|.+.+|+.+.......... ...++..+.+|+++++++.++++ .
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGK 82 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 357899999999999999999999999999999998765433222211 12468899999999988877764 4
Q ss_pred ccEEEEccccccccCc---------chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 77 ANVVINLIGREYETRN---------YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~~---------~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
+|++||+||......+ ...+++|+.++..+.+++. +.+ -.++|++||.......| ..|+.+|.+
T Consensus 83 iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKaa 161 (260)
T d1zema1 83 IDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSKGA 161 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHHHH
T ss_pred CCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCcchHHHHHHHHH
Confidence 7999999986432111 2466889888888877653 333 35899999976544444 689999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCChhHHH--------------------HHHHHhhcCceeeecCCCceecc
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDRLLNK--------------------WAQFVKKFNFFPLFGDGSTRIQP 194 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~ 194 (327)
++.+.+.. ++++..+.||.+-.+ ++.. +...+... .| ...+
T Consensus 162 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P-------l~R~ 229 (260)
T d1zema1 162 IIALTETAALDLAPYNIRVNAISPGYMGPG---FMWERQVELQAKVGSQYFSTDPKVVAQQMIGS--VP-------MRRY 229 (260)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECSBCSS---HHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT--ST-------TSSC
T ss_pred HHHHHHHHHHHhhhhCCEEEEeccCcccCc---chhhcchhhhhhhcccccccCHHHHHHHHHhc--CC-------CCCC
Confidence 99887654 489999999988532 1111 11111111 11 1124
Q ss_pred eeHHHHHHHHHHHhhcCCC-CCCceEEecCC
Q 047628 195 VYVVDVAAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 195 i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
...+|+|.+++.++..... ..|+++.+.|+
T Consensus 230 g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 230 GDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp BCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred cCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 5679999999999875432 26888888774
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.75 E-value=6.6e-18 Score=141.14 Aligned_cols=218 Identities=18% Similarity=0.158 Sum_probs=146.8
Q ss_pred CCcccCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 1 MTYVYSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
|+.+++.+++|||||+| -||++++++|+++|++|.+..|+........+......+...+++|+++++++.++++
T Consensus 2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (256)
T d1ulua_ 2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK 81 (256)
T ss_dssp EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHH
Confidence 34557789999999998 6999999999999999988888754322111111111357789999999988877764
Q ss_pred ----cccEEEEcccccccc---------Cc---chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHH
Q 047628 76 ----KANVVINLIGREYET---------RN---YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVF 136 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~---------~~---~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~ 136 (327)
++|++||+|+..... .. ...+++|+.++..+.+++...- +-.++|++||.......| ..|+
T Consensus 82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~ 161 (256)
T d1ulua_ 82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMA 161 (256)
T ss_dssp HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHH
T ss_pred HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHH
Confidence 479999999864211 11 1256778888888887765431 013799999977654444 7899
Q ss_pred HhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 137 STKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 137 ~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
.+|.+++.+.+.. ++++..+.||.+..+..... ........+. .|+ ..+...+|+|.+++.
T Consensus 162 asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~--~pl-------~R~~~pedvA~~v~f 232 (256)
T d1ulua_ 162 IAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQT--APL-------RRNITQEEVGNLGLF 232 (256)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHH--STT-------SSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHH
Confidence 9999999888754 48999999998865422111 2222222222 121 124567999999999
Q ss_pred HhhcCCC-CCCceEEecCCccc
Q 047628 207 ALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
++..... ..|+++.+.++..+
T Consensus 233 L~S~~s~~itG~~i~VDGG~~~ 254 (256)
T d1ulua_ 233 LLSPLASGITGEVVYVDAGYHI 254 (256)
T ss_dssp HHSGGGTTCCSCEEEESTTGGG
T ss_pred HhCchhCCccCCeEEECcCEeC
Confidence 9875442 27899999987554
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.75 E-value=9.4e-18 Score=139.62 Aligned_cols=215 Identities=12% Similarity=0.016 Sum_probs=149.9
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh--hcccCCCCCeeEEeeCCC-ChhHHHHHhc----
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH--LKLMGDLGQIVPMKFNPR-DDNTIKATMA---- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~--~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~---- 75 (327)
|+++.++||||||++-||..++++|+++|.+|+++.|+.++.... +.......++.++.+|++ +.+++.++++
T Consensus 1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 80 (254)
T d1sbya1 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD 80 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999887764322 222233347889999997 5555655443
Q ss_pred ---cccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHc------CCcceEEEEeccCCCCCCC--chHHHhHHHHHH
Q 047628 76 ---KANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEH------GGIMRFIQISCLGASSSSP--SRVFSTKAAAEE 144 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~------~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~ 144 (327)
.+|++|++||......=+..+++|+.++.++.+++... ++..++|++||.......+ ..|+.+|.+...
T Consensus 81 ~~g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~ 160 (254)
T d1sbya1 81 QLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVS 160 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHH
T ss_pred HcCCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHH
Confidence 47999999998665554678899999888888876431 1135799999987765444 789999999988
Q ss_pred HHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCCCCCc
Q 047628 145 AVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGTSMGK 217 (327)
Q Consensus 145 ~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~~~~~ 217 (327)
+.+.. ++++..+.||.+..+ ....+.......+.+.- ..........+++|++++.+++... .|+
T Consensus 161 ~t~~la~el~~~gIrVn~I~PG~v~T~---~~~~~~~~~~~~~~~~~---~~~~~~~~~~e~va~~~~~~~~~~~--tG~ 232 (254)
T d1sbya1 161 FTNSLAKLAPITGVTAYSINPGITRTP---LVHTFNSWLDVEPRVAE---LLLSHPTQTSEQCGQNFVKAIEANK--NGA 232 (254)
T ss_dssp HHHHHHHHHHHHSEEEEEEEECSEESH---HHHSCCCGGGSCTTHHH---HHTTSCCEEHHHHHHHHHHHHHHCC--TTC
T ss_pred HHHHHHhhccccCeEEEEEEeCCCcCc---cccccccchhHHHHHHh---ccccCCCCCHHHHHHHHHHhhhCCC--CCC
Confidence 77654 489999999988632 11000000000000000 0001234468999999999988775 589
Q ss_pred eEEecCCc
Q 047628 218 IYELGGPD 225 (327)
Q Consensus 218 ~~~v~~~~ 225 (327)
++.+.++.
T Consensus 233 vi~vdgG~ 240 (254)
T d1sbya1 233 IWKLDLGT 240 (254)
T ss_dssp EEEEETTE
T ss_pred EEEECCCE
Confidence 99998874
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.75 E-value=1.8e-17 Score=141.01 Aligned_cols=212 Identities=14% Similarity=0.139 Sum_probs=146.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc------CCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM------GDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~------~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
++.+++|||||++-||++++++|+++|++|++.+|+.++......++ ....++..+.+|+++++++.++++
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~ 89 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 89 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence 46799999999999999999999999999999999876543222111 112468899999999998887764
Q ss_pred ----cccEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCC-CCCchHHHh
Q 047628 76 ----KANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASS-SSPSRVFST 138 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~-~~~~~y~~~ 138 (327)
.+|++||+|+....... ...+++|+.++..+.+++.. .+ -.++|.+|+..... .....|+.+
T Consensus 90 ~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~~~~~~~~~Y~as 168 (297)
T d1yxma1 90 DTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKAGFPLAVHSGAA 168 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTTCCTTCHHHHHH
T ss_pred HHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccccccccccccccchhH
Confidence 47999999987432211 34778899998888887643 22 34677776644332 223789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCC-hhH----HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHH
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTED-RLL----NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTA 206 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~ 206 (327)
|.+++.+.+.. ++++..+.||.+..+.. ... ..+.....+ ..|+ ..+...+|+|.+++.
T Consensus 169 Kaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~--~~pl-------gR~g~pedvA~~v~f 239 (297)
T d1yxma1 169 RAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ--KIPA-------KRIGVPEEVSSVVCF 239 (297)
T ss_dssp HHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGG--GSTT-------SSCBCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHh--cCCC-------CCCcCHHHHHHHHHH
Confidence 99999888764 48999999998864311 000 111111111 1111 134567999999999
Q ss_pred HhhcCCC-CCCceEEecCCcc
Q 047628 207 ALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 207 ~l~~~~~-~~~~~~~v~~~~~ 226 (327)
++..... ..|+++.+.|+.+
T Consensus 240 L~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 240 LLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp HHSGGGTTCCSCEEEESTTGG
T ss_pred HhCchhcCcCCcEEEeCcChh
Confidence 9965432 2799999999754
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.74 E-value=1.4e-17 Score=140.38 Aligned_cols=209 Identities=13% Similarity=0.019 Sum_probs=143.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
.++.+++|||||++-||+++++.|+++|++|.+++|+.++..+...+.+ .++..+.+|+++++++.++++ .
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~--~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG--DNVLGIVGDVRSLEDQKQAASRCVARFGK 79 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC--CCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence 3567899999999999999999999999999999998765443333333 468899999999988877654 4
Q ss_pred ccEEEEccccccccC-----c--------chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 77 ANVVINLIGREYETR-----N--------YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~-----~--------~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
+|++||+||...... + ...+++|+.++..+.+++ ++.+ .++|++||.......| ..|+.
T Consensus 80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~~~~~~~Y~a 157 (276)
T d1bdba_ 80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPNGGGPLYTA 157 (276)
T ss_dssp CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSTTSSCHHHHH
T ss_pred cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccCCCCCchHHH
Confidence 799999998642211 1 245678888877777665 3433 3778887765543333 67999
Q ss_pred hHHHHHHHHHhhC------CCeEEEecCeeecCCC--hh---------HHHHHHHHhhcCceeeecCCCceecceeHHHH
Q 047628 138 TKAAAEEAVLREL------PWATIMRPAAMIGTED--RL---------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 138 ~K~~~E~~~~~~~------~~~~i~r~~~~~G~~~--~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
+|.+++.+.+... +++..+.||.+--+-. .. -..+....... .|+ -.+...+|+
T Consensus 158 sKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Pl-------gR~g~peev 228 (276)
T d1bdba_ 158 AKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSV--LPI-------GRMPEVEEY 228 (276)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTT--CTT-------SSCCCGGGG
T ss_pred HHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhc--CCC-------CCCcCHHHH
Confidence 9999988876542 8889999998753210 00 01111112211 221 124556999
Q ss_pred HHHHHHHhhc--CCCCCCceEEecCCc
Q 047628 201 AAAVTAALKD--DGTSMGKIYELGGPD 225 (327)
Q Consensus 201 a~~~~~~l~~--~~~~~~~~~~v~~~~ 225 (327)
|.+++.++.. .....|+.+++.|+-
T Consensus 229 a~~v~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 229 TGAYVFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp SHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred HHHHHHHcCCcccCCeeCcEEEECcCh
Confidence 9999888752 232379999999873
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.73 E-value=4.5e-17 Score=133.95 Aligned_cols=203 Identities=16% Similarity=0.088 Sum_probs=142.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC-hhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD-DNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~-~~~~~~~~~~~d~vi~~ 83 (327)
++.+++|||||++-||+++++.|+++|++|.+.+|+.+. ++.. ..+++.+|+++ .+.+.+.+..+|++||+
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~----l~~~----~~~~~~~Dv~~~~~~~~~~~g~iD~lVnn 73 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL----LKRS----GHRYVVCDLRKDLDLLFEKVKEVDILVLN 73 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHT----CSEEEECCTTTCHHHHHHHSCCCSEEEEC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHH----HHhc----CCcEEEcchHHHHHHHHHHhCCCcEEEec
Confidence 457899999999999999999999999999999998543 2222 35678899976 35566666779999999
Q ss_pred cccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh
Q 047628 84 IGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE 149 (327)
Q Consensus 84 a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~ 149 (327)
||...... . ...+++|+.++..+.+++ ++.+ -.++|.+||.......+ ..|+.+|.+++.+.+..
T Consensus 74 AG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~l 152 (234)
T d1o5ia_ 74 AGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTL 152 (234)
T ss_dssp CCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred ccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccccccccchhHHHHHHHHHHHH
Confidence 98743221 1 245678888777776655 4444 45899999876654444 67899999998877654
Q ss_pred -------CCCeEEEecCeeecCCC-hhH-HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceE
Q 047628 150 -------LPWATIMRPAAMIGTED-RLL-NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIY 219 (327)
Q Consensus 150 -------~~~~~i~r~~~~~G~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~ 219 (327)
++++..+.||.+-.+.. ... ........+ ..|+ ..+...+|+|.+++.++..... ..|+++
T Consensus 153 A~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~--~~pl-------~R~~~pediA~~v~fL~S~~s~~itG~~i 223 (234)
T d1o5ia_ 153 SFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVES--QIPM-------RRMAKPEEIASVVAFLCSEKASYLTGQTI 223 (234)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHT--TSTT-------SSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred HHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHh--cCCC-------CCCcCHHHHHHHHHHHhChhhcCCcCcEE
Confidence 48999999998864421 111 111122221 1221 2356789999999998865432 278999
Q ss_pred EecCCc
Q 047628 220 ELGGPD 225 (327)
Q Consensus 220 ~v~~~~ 225 (327)
.+.++-
T Consensus 224 ~vDGG~ 229 (234)
T d1o5ia_ 224 VVDGGL 229 (234)
T ss_dssp EESTTC
T ss_pred EECccc
Confidence 998864
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.73 E-value=2e-17 Score=136.79 Aligned_cols=206 Identities=17% Similarity=0.168 Sum_probs=142.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh----hhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR----HLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~----~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.||||||++-||++++++|+++|++|.+..++...... .+...+ .++..+++|+++++++.++++ .
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 79 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG--GQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT--CEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcC--CcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999887654432222 222222 468889999999998877764 4
Q ss_pred ccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCC--CCchHHHhHHHH
Q 047628 77 ANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSS--SPSRVFSTKAAA 142 (327)
Q Consensus 77 ~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~--~~~~y~~~K~~~ 142 (327)
+|++||+||...... . ...+++|+.++..+.+++ ++.+ -.++|++||...... ....|+.+|.++
T Consensus 80 iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaal 158 (244)
T d1edoa_ 80 IDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGV 158 (244)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred CCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCCCHHHHHHHHHH
Confidence 799999998754321 1 347788988888877765 3344 469999999765332 337899999999
Q ss_pred HHHHHhh-------CCCeEEEecCeeecCC-ChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC--
Q 047628 143 EEAVLRE-------LPWATIMRPAAMIGTE-DRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG-- 212 (327)
Q Consensus 143 E~~~~~~-------~~~~~i~r~~~~~G~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~-- 212 (327)
+.+.+.. ++++..+.||.+--+. +...........+. .|+ ..+...+|+|++++.++..+.
T Consensus 159 ~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~--~pl-------~R~~~p~dvA~~v~fLa~S~~a~ 229 (244)
T d1edoa_ 159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGT--IPL-------GRTGQPENVAGLVEFLALSPAAS 229 (244)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTS--CTT-------CSCBCHHHHHHHHHHHHHCSGGG
T ss_pred HHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHHCCchhc
Confidence 9888754 4899999999885221 11112222222211 221 235677999999998864332
Q ss_pred CCCCceEEecCCc
Q 047628 213 TSMGKIYELGGPD 225 (327)
Q Consensus 213 ~~~~~~~~v~~~~ 225 (327)
...|+++.+.|+-
T Consensus 230 ~itG~~i~vdGG~ 242 (244)
T d1edoa_ 230 YITGQAFTIDGGI 242 (244)
T ss_dssp GCCSCEEEESTTT
T ss_pred CCcCCeEEeCCCe
Confidence 2278999998863
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.72 E-value=1.1e-16 Score=132.33 Aligned_cols=208 Identities=12% Similarity=-0.003 Sum_probs=146.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh---ccccEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM---AKANVVI 81 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~---~~~d~vi 81 (327)
++.+++|||||++-||+++++.|+++|++|++.+|++++... + .+...++...+|+.+.+.+.... .++|++|
T Consensus 4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~-~---~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lV 79 (245)
T d2ag5a1 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-L---EKYPGIQTRVLDVTKKKQIDQFANEVERLDVLF 79 (245)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG-G---GGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHH-H---HhccCCceeeeeccccccccccccccccceeEE
Confidence 567899999999999999999999999999999998654322 2 22246888899998877666554 3579999
Q ss_pred EccccccccCc--------chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCC-C--CCCchHHHhHHHHHHHH
Q 047628 82 NLIGREYETRN--------YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGAS-S--SSPSRVFSTKAAAEEAV 146 (327)
Q Consensus 82 ~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~-~--~~~~~y~~~K~~~E~~~ 146 (327)
|++|....... ...+++|+.++..+.+++. +.+ -.++|++||.... . .....|+.+|.+.+.+.
T Consensus 80 n~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~ 158 (245)
T d2ag5a1 80 NVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLT 158 (245)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHH
T ss_pred ecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCccchhHHHHHHHHHHHHH
Confidence 99998544221 3467888888888877654 333 4589999886442 2 22378999999999988
Q ss_pred Hhh-------CCCeEEEecCeeecCCCh-------hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDR-------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
+.. ++++..+.||.+-.+... ............ .| ...+...+|+|+++..++.+..
T Consensus 159 r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~p-------l~R~~~pedva~~v~fL~s~~s 229 (245)
T d2ag5a1 159 KSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR--QK-------TGRFATAEEIAMLCVYLASDES 229 (245)
T ss_dssp HHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT--CT-------TSSCEEHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhc--CC-------CCCCcCHHHHHHHHHHHhChhh
Confidence 764 489999999988643110 001111111111 11 1235678999999999997543
Q ss_pred -CCCCceEEecCCcc
Q 047628 213 -TSMGKIYELGGPDI 226 (327)
Q Consensus 213 -~~~~~~~~v~~~~~ 226 (327)
...|+.+.+.++.+
T Consensus 230 ~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 230 AYVTGNPVIIDGGWS 244 (245)
T ss_dssp TTCCSCEEEECTTGG
T ss_pred CCCcCceEEeCCCcC
Confidence 23799999998754
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.72 E-value=1.1e-16 Score=134.19 Aligned_cols=211 Identities=14% Similarity=0.115 Sum_probs=140.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccC-CCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMG-DLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~-~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
++.+.+|||||++-||++++++|+++|++|.+.+|+.++...... ..+ ...++..+.+|+++++++.++++
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK 82 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999998765433222 221 12358899999999998887764
Q ss_pred --cccEEEEcccccccc---------Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEecc-CCCCCCC--ch
Q 047628 76 --KANVVINLIGREYET---------RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCL-GASSSSP--SR 134 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~---------~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~-~v~~~~~--~~ 134 (327)
++|++||+||..... +. ...+++|+.++..+.+++. +.+ .++|.++|. +.....| ..
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~~~~~~~~~ 160 (264)
T d1spxa_ 83 FGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPY 160 (264)
T ss_dssp HSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSHH
T ss_pred hCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--CcceeeeeeccccccCCCchh
Confidence 479999999874211 11 2356788888877777654 333 355555554 3333333 67
Q ss_pred HHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChh----------HHHHHHHHhhcCceeeecCCCceecceeH
Q 047628 135 VFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRL----------LNKWAQFVKKFNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 135 y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 197 (327)
|+.+|.+.+.+.+.. ++++..+.||.+--+.... .........+. .|+ ..+...
T Consensus 161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~Pl-------~R~g~p 231 (264)
T d1spxa_ 161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC--VPA-------GVMGQP 231 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHH--CTT-------SSCBCH
T ss_pred hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhc--CCC-------CCCcCH
Confidence 999999998887654 4999999999885431110 01111111111 111 134567
Q ss_pred HHHHHHHHHHhhcC--CCCCCceEEecCCcc
Q 047628 198 VDVAAAVTAALKDD--GTSMGKIYELGGPDI 226 (327)
Q Consensus 198 ~D~a~~~~~~l~~~--~~~~~~~~~v~~~~~ 226 (327)
+|+|++++.++.++ ....|+.+.+.|+.+
T Consensus 232 edvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 232 QDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp HHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 99999999988633 323799999998754
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.71 E-value=8.8e-17 Score=135.30 Aligned_cols=213 Identities=14% Similarity=0.085 Sum_probs=146.6
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh---cccC-CCCCeeEEeeCCCChhHHHHHhc------
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL---KLMG-DLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~---~~~~-~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
+.++++||||++-||+++++.|++.|++|.+.+|+.++..... ...+ ...++..+.+|+++++++.++++
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 5689999999999999999999999999999999876533222 2221 12368899999999998877664
Q ss_pred -cccEEEEcccccccc-------Cc---chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 -KANVVINLIGREYET-------RN---YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~-------~~---~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
.+|++||+||..... +. ...+++|+.++..+.+++. +.+ -.+++++||.......+ ..|+.+
T Consensus 83 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~~~~~~Y~as 161 (274)
T d1xhla_ 83 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYACA 161 (274)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHHHH
T ss_pred CCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccCCCCceehhh
Confidence 479999999864221 11 2356788888887777654 343 35788888765543333 689999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCC-------ChhHHHHHHHHhh-cCceeeecCCCceecceeHHHHHHH
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTE-------DRLLNKWAQFVKK-FNFFPLFGDGSTRIQPVYVVDVAAA 203 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~ 203 (327)
|.+++.+.+.. ++++..+.||.+--+. ...-......... ....|+ ..+...+|+|.+
T Consensus 162 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-------gR~g~pediA~~ 234 (274)
T d1xhla_ 162 KAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-------GHCGKPEEIANI 234 (274)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SSCBCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-------CCCcCHHHHHHH
Confidence 99999887653 4999999999886431 0011111111111 111222 234577999999
Q ss_pred HHHHhhc--CCCCCCceEEecCCcc
Q 047628 204 VTAALKD--DGTSMGKIYELGGPDI 226 (327)
Q Consensus 204 ~~~~l~~--~~~~~~~~~~v~~~~~ 226 (327)
++.++.. .....|+++.+.|+.+
T Consensus 235 v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 235 IVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp HHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred HHHHcCCccccCccCcEEEeCcCHH
Confidence 9998853 2323799999999864
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.71 E-value=1.5e-16 Score=133.71 Aligned_cols=215 Identities=14% Similarity=0.090 Sum_probs=144.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhc---ccC-CCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLK---LMG-DLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~---~~~-~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
++.++++||||++-||+++++.|+++|++|.+.+|+.++.....+ ..+ ...++..+.+|+++++++.++++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~ 82 (272)
T d1xkqa_ 3 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQ 82 (272)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999998765433222 211 12358899999999998877664
Q ss_pred --cccEEEEccccccccC--------c----chhHhhhhHHHHHHHHHHHH----cCCcceEEEEeccCCCCCCC--chH
Q 047628 76 --KANVVINLIGREYETR--------N----YSFEDVNHFMAERIAGIAKE----HGGIMRFIQISCLGASSSSP--SRV 135 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~--------~----~~~~~~n~~~~~~l~~a~~~----~~~v~~~v~~Ss~~v~~~~~--~~y 135 (327)
.+|++||+||...... . ...+++|+.++..+.+++.. .+ -..++.+|+.+.....| ..|
T Consensus 83 ~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~~Y 161 (272)
T d1xkqa_ 83 FGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYY 161 (272)
T ss_dssp HSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSHHH
T ss_pred hCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcchh
Confidence 4799999998753211 1 23457888888887776533 32 23444445444333333 789
Q ss_pred HHhHHHHHHHHHhh-------CCCeEEEecCeeecCC-------ChhHHHHHHHHhh-cCceeeecCCCceecceeHHHH
Q 047628 136 FSTKAAAEEAVLRE-------LPWATIMRPAAMIGTE-------DRLLNKWAQFVKK-FNFFPLFGDGSTRIQPVYVVDV 200 (327)
Q Consensus 136 ~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~ 200 (327)
+.+|.+++.+.+.. ++++..+.||.+-.+. +.....+...... ....|+ ..+...+|+
T Consensus 162 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------gR~g~pedi 234 (272)
T d1xkqa_ 162 AIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-------GAAGKPEHI 234 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-------SSCBCHHHH
T ss_pred hhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-------CCCcCHHHH
Confidence 99999998887654 4999999999885331 1111111111111 112222 235677999
Q ss_pred HHHHHHHhhcC--CCCCCceEEecCCccc
Q 047628 201 AAAVTAALKDD--GTSMGKIYELGGPDIF 227 (327)
Q Consensus 201 a~~~~~~l~~~--~~~~~~~~~v~~~~~~ 227 (327)
|++++.++..+ ....|+++.+.|+..+
T Consensus 235 A~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 235 ANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp HHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred HHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 99999988632 2227999999998654
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.70 E-value=3.1e-16 Score=130.94 Aligned_cols=211 Identities=19% Similarity=0.168 Sum_probs=145.4
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
++..+++|||||++-||+++++.|+++|++|++..|+.++.... +...+ .++..+.+|+++++++.+.++
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVS 80 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcC--CCceEecCCCCCHHHHHHHHHHHHH
Confidence 35578999999999999999999999999999877765443222 22223 468899999999988877664
Q ss_pred ---cccEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHHcC-CcceEEEEec-cCCCCCCC--chHHHhHH
Q 047628 76 ---KANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISC-LGASSSSP--SRVFSTKA 140 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss-~~v~~~~~--~~y~~~K~ 140 (327)
.+|++||+||.....+. ...+++|+.+...+++++...- +-.+++.++| .+.....| ..|+.+|.
T Consensus 81 ~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~ 160 (259)
T d1ja9a_ 81 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA 160 (259)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred HcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHH
Confidence 47999999998543221 3577889988888888776531 0124555544 44333233 78999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecC-------------CC-hhHHHHHHHHhhcCceeeecCCCceecceeHHH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGT-------------ED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVD 199 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~-------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D 199 (327)
+.+.+.+.. ++++..+.||.+--+ .. .....+...+.+..++ ..+...+|
T Consensus 161 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl---------~R~g~p~e 231 (259)
T d1ja9a_ 161 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL---------KRIGYPAD 231 (259)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT---------SSCBCHHH
T ss_pred HHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC---------CCCcCHHH
Confidence 998888754 499999999988521 00 0112222222222211 23567799
Q ss_pred HHHHHHHHhhcCCC-CCCceEEecCCc
Q 047628 200 VAAAVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 200 ~a~~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
+|++++.++.+... ..|+.+.+.++.
T Consensus 232 Va~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 232 IGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 99999999986553 278899998863
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.69 E-value=8.3e-16 Score=129.30 Aligned_cols=212 Identities=18% Similarity=0.152 Sum_probs=145.9
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh----hcccCCCCCeeEEeeCCCChhHHHHHhc---
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH----LKLMGDLGQIVPMKFNPRDDNTIKATMA--- 75 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~----~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--- 75 (327)
.+++.+++|||||++-||+++++.|+++|++|++.+|+.+..... +...+ .++.++++|+++++++.+.++
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g--~~~~~~~~D~~~~~~v~~~~~~~~ 91 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG--SDAACVKANVGVVEDIVRMFEEAV 91 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhC--CceeeEeCCCCCHHHHHHHHHHHH
Confidence 346679999999999999999999999999999998876543222 22222 468899999999988887764
Q ss_pred ----cccEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccC-CCCCC--CchHHHhH
Q 047628 76 ----KANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLG-ASSSS--PSRVFSTK 139 (327)
Q Consensus 76 ----~~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~-v~~~~--~~~y~~~K 139 (327)
.+|++||+++....... ...+++|+.++..+.+++...= +-.++++++|.. ..... ...|+.+|
T Consensus 92 ~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asK 171 (272)
T d1g0oa_ 92 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSK 171 (272)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHH
T ss_pred HHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHH
Confidence 46999999987533211 3466889999888888876531 113666666653 32222 26799999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHH---------------HhhcCceeeecCCCceecceeH
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQF---------------VKKFNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~ 197 (327)
.+.+.+.+.. ++++..+.||.+-.+ ....+... .......|+ ..+...
T Consensus 172 aal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-------gR~~~p 241 (272)
T d1g0oa_ 172 GAIETFARCMAIDMADKKITVNVVAPGGIKTD---MYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-------RRVGLP 241 (272)
T ss_dssp HHHHHHHHHHHHHHGGGTCEEEEEEECCBSSH---HHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-------CSCBCH
T ss_pred HHHHHHHHHHHHHhchhCeEEEEEccCCcCCh---HHHHHHHhhhhcccccchHHHHHHHHHccCCC-------CCCcCH
Confidence 9999888643 599999999988521 11111000 000001111 245778
Q ss_pred HHHHHHHHHHhhcCCC-CCCceEEecCCcc
Q 047628 198 VDVAAAVTAALKDDGT-SMGKIYELGGPDI 226 (327)
Q Consensus 198 ~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~ 226 (327)
+|+|.+++.++..... ..|++..+.|+..
T Consensus 242 eevA~~v~fL~s~~s~~itG~~i~vDGG~~ 271 (272)
T d1g0oa_ 242 IDIARVVCFLASNDGGWVTGKVIGIDGGAC 271 (272)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHHHHHHhCchhcCccCceEeECCCCC
Confidence 9999999999975442 2788999998753
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.68 E-value=1.6e-15 Score=126.28 Aligned_cols=197 Identities=20% Similarity=0.174 Sum_probs=135.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.+.+|||||++-||.++++.|+++|++|++..|+.++.... ++..+...++..+++|+++++++.++++
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~ 87 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH 87 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 4568999999999999999999999999999999987654332 2222222468889999999998877664
Q ss_pred -cccEEEEccccccccCc--------chhHhhhhHHHHHHHHHH----HHcCC-cceEEEEeccCCCCCCC----chHHH
Q 047628 76 -KANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIA----KEHGG-IMRFIQISCLGASSSSP----SRVFS 137 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~----~~~~~-v~~~v~~Ss~~v~~~~~----~~y~~ 137 (327)
++|++||+||......- ...+++|+.+...+.+++ ++.+. -.++|++||.......| ..|+.
T Consensus 88 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~ 167 (257)
T d1xg5a_ 88 SGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSA 167 (257)
T ss_dssp CCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHH
T ss_pred CCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHH
Confidence 47999999987533211 346788888877766654 33321 24899999977643332 56999
Q ss_pred hHHHHHHHHHhh---------CCCeEEEecCeeecCCChhHHHH----HHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 138 TKAAAEEAVLRE---------LPWATIMRPAAMIGTEDRLLNKW----AQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 138 ~K~~~E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
+|.+++.+.+.. ++++..+.||.+-.+ ....+ ...... ..+. ..+...+|+|+++
T Consensus 168 sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~---~~~~~~~~~~~~~~~--~~~~-------~r~~~pedvA~~v 235 (257)
T d1xg5a_ 168 TKYAVTALTEGLRQELREAQTHIRATCISPGVVETQ---FAFKLHDKDPEKAAA--TYEQ-------MKCLKPEDVAEAV 235 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSS---HHHHHTTTCHHHHHH--HHC----------CBCHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCCh---hhhhcChhhHHHHHh--cCCC-------CCCcCHHHHHHHH
Confidence 999998876432 378889999876422 11111 011110 1111 2456789999999
Q ss_pred HHHhhcCCC
Q 047628 205 TAALKDDGT 213 (327)
Q Consensus 205 ~~~l~~~~~ 213 (327)
+.++..+..
T Consensus 236 ~fL~s~~a~ 244 (257)
T d1xg5a_ 236 IYVLSTPAH 244 (257)
T ss_dssp HHHHHSCTT
T ss_pred HHHhCChhc
Confidence 999887653
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.68 E-value=1.6e-16 Score=132.86 Aligned_cols=207 Identities=14% Similarity=0.011 Sum_probs=143.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHh---CCCEEEEeeCCCCCchhhh---cccCCCCCeeEEeeCCCChhHHHHHhc--
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAK---MGSQVLVPFRGCEDDPRHL---KLMGDLGQIVPMKFNPRDDNTIKATMA-- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~~---~~~~~~~~v~~~~~Dl~~~~~~~~~~~-- 75 (327)
.+..+.++||||++-||++++++|.+ +|++|++++|+.++..... ...+...++..+.+|+++++++.++++
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~ 82 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence 46678899999999999999999985 7999999999876543322 222222468899999999998877653
Q ss_pred ---------cccEEEEcccccccc--------Cc---chhHhhhhHHHHHHHHHHHHcC-----CcceEEEEeccCCCCC
Q 047628 76 ---------KANVVINLIGREYET--------RN---YSFEDVNHFMAERIAGIAKEHG-----GIMRFIQISCLGASSS 130 (327)
Q Consensus 76 ---------~~d~vi~~a~~~~~~--------~~---~~~~~~n~~~~~~l~~a~~~~~-----~v~~~v~~Ss~~v~~~ 130 (327)
..|+++++||..... +. ...+++|+.++..+.+++...= .-.++|++||......
T Consensus 83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~ 162 (259)
T d1oaaa_ 83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP 162 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence 247899998864211 11 2467899999999999886531 1247999999876544
Q ss_pred CC--chHHHhHHHHHHHHHhh-----CCCeEEEecCeeecCCChhHHHH---------HHHHhhcCceeeecCCCceecc
Q 047628 131 SP--SRVFSTKAAAEEAVLRE-----LPWATIMRPAAMIGTEDRLLNKW---------AQFVKKFNFFPLFGDGSTRIQP 194 (327)
Q Consensus 131 ~~--~~y~~~K~~~E~~~~~~-----~~~~~i~r~~~~~G~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 194 (327)
.| ..|+.+|.+++.+.+.. ++++..+.||.+-.+ +.... ....... .+ ...+
T Consensus 163 ~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~---~~~~~~~~~~~~~~~~~~~~~--~~-------~~r~ 230 (259)
T d1oaaa_ 163 YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDND---MQQLARETSKDPELRSKLQKL--KS-------DGAL 230 (259)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSH---HHHHHHHHCSCHHHHHHHHHH--HH-------TTCS
T ss_pred CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCH---HHHHhhhcCCCHHHHHHHHhc--CC-------CCCC
Confidence 44 78999999998887765 488999999988632 11111 1111100 01 0124
Q ss_pred eeHHHHHHHHHHHhhcCCCCCCceEEec
Q 047628 195 VYVVDVAAAVTAALKDDGTSMGKIYELG 222 (327)
Q Consensus 195 i~~~D~a~~~~~~l~~~~~~~~~~~~v~ 222 (327)
...+|+|++++.++.+.....|+.+++.
T Consensus 231 ~~p~evA~~i~~ll~~~s~~TG~~idv~ 258 (259)
T d1oaaa_ 231 VDCGTSAQKLLGLLQKDTFQSGAHVDFY 258 (259)
T ss_dssp BCHHHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred CCHHHHHHHHHHHhhhccCCCCCeEEec
Confidence 5679999999999986653357777653
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.68 E-value=2.1e-16 Score=131.29 Aligned_cols=203 Identities=13% Similarity=0.040 Sum_probs=140.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------cccEEE
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------KANVVI 81 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~~d~vi 81 (327)
++|||||++.||+.+++.|+++|++|.+.+|+.+... .++... ..+..+|+++++++.++++ .+|++|
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~-~~~~~~----~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV 76 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKD-ELEAFA----ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLV 76 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHH-HHHHHH----HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHhhh----CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 6899999999999999999999999999999876633 222211 2344677777665555443 579999
Q ss_pred EccccccccCc---------chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHHHHHHHH
Q 047628 82 NLIGREYETRN---------YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAV 146 (327)
Q Consensus 82 ~~a~~~~~~~~---------~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~ 146 (327)
|+||......+ ...+++|+.++..+.+++ ++.+ -.++|++||.......+ ..|+.+|.+++.+.
T Consensus 77 nNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt 155 (252)
T d1zmta1 77 SNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLA 155 (252)
T ss_dssp EECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHH
T ss_pred ECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccccccccccccccHHHHH
Confidence 99986432111 235578888877777764 3444 35899999987765554 68999999999887
Q ss_pred Hhh-------CCCeEEEecCeeecCCCh-h--------HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 147 LRE-------LPWATIMRPAAMIGTEDR-L--------LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 147 ~~~-------~~~~~i~r~~~~~G~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
+.. ++++..+.||.+-.+... . .+.....+.+. .|+ ..+...+|+|.+++.++..
T Consensus 156 ~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~--~pl-------~R~g~pedvA~~v~fL~S~ 226 (252)
T d1zmta1 156 NALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV--TAL-------QRLGTQKELGELVAFLASG 226 (252)
T ss_dssp HHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH--SSS-------SSCBCHHHHHHHHHHHHTT
T ss_pred HHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhc--CCC-------CCCcCHHHHHHHHHHHhCc
Confidence 654 499999999988644211 0 11222222222 221 1245679999999999976
Q ss_pred CCC-CCCceEEecCCcc
Q 047628 211 DGT-SMGKIYELGGPDI 226 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~ 226 (327)
... ..|+++.+.|+-+
T Consensus 227 ~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 227 SCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp SCGGGTTCEEEESTTCC
T ss_pred hhcCCcCCeEEECCCce
Confidence 553 2789999998743
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.68 E-value=4.4e-16 Score=132.46 Aligned_cols=220 Identities=15% Similarity=0.091 Sum_probs=149.9
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-----hhhh----cccCCCCCeeEEeeCCCChhHHHH
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-----PRHL----KLMGDLGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-----~~~~----~~~~~~~~v~~~~~Dl~~~~~~~~ 72 (327)
||.++.+++|||||++-||+++++.|+++|++|.+.+|+.+.. ...+ .... .......+|+.+.+++.+
T Consensus 2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~ 79 (302)
T d1gz6a_ 2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR--RRGGKAVANYDSVEAGEK 79 (302)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH--HTTCEEEEECCCGGGHHH
T ss_pred CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh--hcccccccccchHHHHHH
Confidence 4556689999999999999999999999999999998875432 1111 1111 123456788888776655
Q ss_pred Hhc-------cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCC--
Q 047628 73 TMA-------KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSS-- 131 (327)
Q Consensus 73 ~~~-------~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~-- 131 (327)
+++ ++|++||+||...... . ...+++|+.++..+.+++ ++.+ -.++|++||.......
T Consensus 80 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~~ 158 (302)
T d1gz6a_ 80 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFG 158 (302)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTT
T ss_pred HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCCC
Confidence 443 4799999999854321 1 347788998888887765 3444 3599999997653223
Q ss_pred CchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHH
Q 047628 132 PSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAV 204 (327)
Q Consensus 132 ~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~ 204 (327)
...|+.+|.+++.+.+.. ++++..+.||.+--......+. .....+..+|+|.++
T Consensus 159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~~------------------~~~~~~~PedvA~~v 220 (302)
T d1gz6a_ 159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPE------------------DLVEALKPEYVAPLV 220 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSCH------------------HHHHHSCGGGTHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCcH------------------hhHhcCCHHHHHHHH
Confidence 378999999998887654 4889999998663221111111 112234468999999
Q ss_pred HHHhhcCCCCCCceEEecCC-------------------ccccHHHHHHHHHHHhhc
Q 047628 205 TAALKDDGTSMGKIYELGGP-------------------DIFTVHELAELMYDTIRE 242 (327)
Q Consensus 205 ~~~l~~~~~~~~~~~~v~~~-------------------~~~s~~el~~~i~~~~g~ 242 (327)
+.++.......|+++.+.++ ++.|.+++.+.+.+....
T Consensus 221 ~fL~S~~a~itG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~t~e~i~~~~~~i~d~ 277 (302)
T d1gz6a_ 221 LWLCHESCEENGGLFEVGAGWIGKLRWERTLGAIVRKRNQPMTPEAVRDNWVKICDF 277 (302)
T ss_dssp HHHTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCBTTBCCCHHHHHHTHHHHTCC
T ss_pred HHHcCCCcCCCCcEEEeCCCceeEEEEeecCcccccCCCCCCCHHHHHHHHHHHhCc
Confidence 99886443336777777554 345777777777776653
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.67 E-value=2.9e-16 Score=129.32 Aligned_cols=188 Identities=13% Similarity=0.037 Sum_probs=135.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCE-------EEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc----
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQ-------VLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA---- 75 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~-------V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~---- 75 (327)
..||||||++-||+++++.|+++|++ |.+.+|+.+.......+. ....++..+.+|++|++++.++++
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE 81 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34799999999999999999999986 888899876543322221 112468889999999998877664
Q ss_pred ---cccEEEEccccccccC-----c---chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHh
Q 047628 76 ---KANVVINLIGREYETR-----N---YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFST 138 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~~-----~---~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~ 138 (327)
.+|++||+||...... . ...+++|+.++..+.+++ ++.+ -.++|++||.......| ..|+.+
T Consensus 82 ~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~as 160 (240)
T d2bd0a1 82 RYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCMS 160 (240)
T ss_dssp HTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred HcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCCCChHHHHH
Confidence 4799999999753221 1 347788998888877765 3444 35899999987665444 789999
Q ss_pred HHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcC
Q 047628 139 KAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDD 211 (327)
Q Consensus 139 K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~ 211 (327)
|.+++.+.+.. ++++..+.||.+--+... .+ ..+..-.+...+|+|++++.++..+
T Consensus 161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~-------------~~----~~~~~~~~~~PedvA~~v~~l~s~~ 223 (240)
T d2bd0a1 161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWG-------------KV----DDEMQALMMMPEDIAAPVVQAYLQP 223 (240)
T ss_dssp HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTC-------------CC----CSTTGGGSBCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhh-------------hc----CHhhHhcCCCHHHHHHHHHHHHcCC
Confidence 99998887653 488999999988532100 00 1111224567799999999999876
Q ss_pred CC
Q 047628 212 GT 213 (327)
Q Consensus 212 ~~ 213 (327)
..
T Consensus 224 ~~ 225 (240)
T d2bd0a1 224 SR 225 (240)
T ss_dssp TT
T ss_pred cc
Confidence 53
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.2e-16 Score=130.24 Aligned_cols=188 Identities=14% Similarity=0.067 Sum_probs=137.2
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhc-----
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMA----- 75 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~----- 75 (327)
+...+.++||||++-||++++++|+++|++|++++|+.++.... +...+ .++..+.+|++|++++.++++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~--~~~~~~~~Dvs~~~~v~~~~~~i~~~ 81 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLG--AKVHTFVVDCSNREDIYSSAKKVKAE 81 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999987654332 22222 478999999999998887664
Q ss_pred --cccEEEEccccccccCc--------chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 --KANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
++|++||+||....... ...+++|+.++.++.+++ ++.+ -.++|.+||.......| ..|+.+|
T Consensus 82 ~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asK 160 (244)
T d1yb1a_ 82 IGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSK 160 (244)
T ss_dssp TCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred cCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCCcHHHHHHH
Confidence 47999999998543221 357788998888777754 4444 46899999988775555 6899999
Q ss_pred HHHHHHHHhh----------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLRE----------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~~----------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.+.+.+.. ++.+..+.||.+--+. . +.... .....+..+|+|+.+...+.
T Consensus 161 aal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~---~--------~~~~~-------~~~~~~~pe~va~~i~~~~~ 222 (244)
T d1yb1a_ 161 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGF---I--------KNPST-------SLGPTLEPEEVVNRLMHGIL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCS---T--------TCTHH-------HHCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChh---h--------hCcCc-------cccCCCCHHHHHHHHHHHHh
Confidence 9988776543 3778899998764221 0 01000 11233567899999998887
Q ss_pred cCC
Q 047628 210 DDG 212 (327)
Q Consensus 210 ~~~ 212 (327)
.+.
T Consensus 223 ~~~ 225 (244)
T d1yb1a_ 223 TEQ 225 (244)
T ss_dssp TTC
T ss_pred cCC
Confidence 654
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.67 E-value=3.3e-16 Score=133.46 Aligned_cols=214 Identities=14% Similarity=0.138 Sum_probs=141.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--CCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--DLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
.+.+++|||||||.||++++++|+++|++|++++|+.++......... ...++..+.+|+++++++.++++
T Consensus 23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 102 (294)
T d1w6ua_ 23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 102 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence 445899999999999999999999999999999998765433222111 01467889999999998876553
Q ss_pred cccEEEEccccccccCc--------chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCC--CCCchHHHhHHH
Q 047628 76 KANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASS--SSPSRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~--~~~~~y~~~K~~ 141 (327)
++|++||+||....... ...+.+|......+...+ .....-..++.+|+..... .....|+.+|.+
T Consensus 103 ~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaa 182 (294)
T d1w6ua_ 103 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAG 182 (294)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred ccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHH
Confidence 47999999997543211 234555666555554433 2222134567677654432 233679999999
Q ss_pred HHHHHHhh-------CCCeEEEecCeeecCCCh----hHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhc
Q 047628 142 AEEAVLRE-------LPWATIMRPAAMIGTEDR----LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKD 210 (327)
Q Consensus 142 ~E~~~~~~-------~~~~~i~r~~~~~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~ 210 (327)
.+.+.+.. ++++.++.||.+-.+... ..........+. .|+ ..+...+|+|.++..++.+
T Consensus 183 l~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~--~pl-------~R~~~pediA~~v~fL~sd 253 (294)
T d1w6ua_ 183 VEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGR--IPC-------GRLGTVEELANLAAFLCSD 253 (294)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTT--CTT-------SSCBCHHHHHHHHHHHTSG
T ss_pred HHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhc--CCC-------CCCCCHHHHHHHHHHHhCc
Confidence 99988754 489999999988643210 011111222211 221 1345679999999999975
Q ss_pred CCC-CCCceEEecCCccc
Q 047628 211 DGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 211 ~~~-~~~~~~~v~~~~~~ 227 (327)
... ..|++..+.|+..+
T Consensus 254 ~s~~itG~~i~vDGG~~l 271 (294)
T d1w6ua_ 254 YASWINGAVIKFDGGEEV 271 (294)
T ss_dssp GGTTCCSCEEEESTTHHH
T ss_pred hhcCCCCcEEEECCChhh
Confidence 442 27999999998643
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.64 E-value=2.2e-15 Score=125.90 Aligned_cols=194 Identities=14% Similarity=0.098 Sum_probs=136.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCc---hhhhccc-CCCCCeeEEeeCCCChhHHHHHhcc-----
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDD---PRHLKLM-GDLGQIVPMKFNPRDDNTIKATMAK----- 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~---~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~----- 76 (327)
..++|||||+|.||..++++|+++|+ .|+++.|+..+. ....... ....++.++.+|++|++++.++++.
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~ 88 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 88 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccc
Confidence 46899999999999999999999998 588888874332 1212211 1125789999999999999887753
Q ss_pred -ccEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCC--CchHHHhHHHHHHH
Q 047628 77 -ANVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSS--PSRVFSTKAAAEEA 145 (327)
Q Consensus 77 -~d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~--~~~y~~~K~~~E~~ 145 (327)
+|.|||+++....... ...+.+|+.++.++.+++...+ ..++|++||....-.. ...|+.+|...+.+
T Consensus 89 ~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~l 167 (259)
T d2fr1a1 89 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGAPGLGGYAPGNAYLDGL 167 (259)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHH
T ss_pred cccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCCcccHHHHHHHHhHHHH
Confidence 5899999997543211 2356789999999999888776 6799999997553323 36799999998887
Q ss_pred HHhh---CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC
Q 047628 146 VLRE---LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT 213 (327)
Q Consensus 146 ~~~~---~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~ 213 (327)
.+.. +++++.+.||.+.+++- ... ... ..+.- .+ ...+..+++++++..++..+..
T Consensus 168 a~~~~~~Gi~v~~I~pg~~~~~g~--~~~---~~~--~~~~~--~G---~~~~~~~~~~~~l~~~l~~~~~ 226 (259)
T d2fr1a1 168 AQQRRSDGLPATAVAWGTWAGSGM--AEG---PVA--DRFRR--HG---VIEMPPETACRALQNALDRAEV 226 (259)
T ss_dssp HHHHHHTTCCCEEEEECCBC-------------------CTT--TT---EECBCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHhCCCCEEECCCCcccCCcc--ccc---hHH--HHHHh--cC---CCCCCHHHHHHHHHHHHhCCCc
Confidence 6543 69999999998875421 110 000 00110 11 3457789999999999987765
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=3.6e-15 Score=123.68 Aligned_cols=206 Identities=15% Similarity=0.124 Sum_probs=141.6
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------c
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------K 76 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------~ 76 (327)
+.+.+.+|||||++-||.+++++|+++|++|++++|+.+.......+.+ .+.....+|+.+.+.+.+... .
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG--NNCVFAPADVTSEKDVQTALALAKGKFGR 79 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC--TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC--CCccccccccccccccccccccccccccc
Confidence 4567899999999999999999999999999999999887665555544 357888899988766654432 3
Q ss_pred ccEEEEcccccccc-----------Cc---chhHhhhhHHHHHHHHHHHHc----------CCcceEEEEeccCCCCCCC
Q 047628 77 ANVVINLIGREYET-----------RN---YSFEDVNHFMAERIAGIAKEH----------GGIMRFIQISCLGASSSSP 132 (327)
Q Consensus 77 ~d~vi~~a~~~~~~-----------~~---~~~~~~n~~~~~~l~~a~~~~----------~~v~~~v~~Ss~~v~~~~~ 132 (327)
.|.++++++..... .. ...+++|+.++.++.+++... + -.++|++||.......|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~~~~~ 158 (248)
T d2o23a1 80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAFEGQV 158 (248)
T ss_dssp CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHHHCCT
T ss_pred ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCC-ceEEEEecchhhccCCC
Confidence 58888776542210 01 246688999999998887542 1 23799999987643333
Q ss_pred --chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCCh-hHHHHHHHHhhcCceeeecCCCceecceeHHHHHH
Q 047628 133 --SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDR-LLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAA 202 (327)
Q Consensus 133 --~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~ 202 (327)
..|+.+|.+.+.+.+.. ++++..+.||.+..+... ..........+. .++. -.+...+|+|+
T Consensus 159 ~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~--~pl~------~R~g~peevA~ 230 (248)
T d2o23a1 159 GQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQ--VPFP------SRLGDPAEYAH 230 (248)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHT--CSSS------CSCBCHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhc--CCCC------CCCcCHHHHHH
Confidence 78999999999988764 489999999988643211 111111111111 2221 12457799999
Q ss_pred HHHHHhhcCCCCCCceEEe
Q 047628 203 AVTAALKDDGTSMGKIYEL 221 (327)
Q Consensus 203 ~~~~~l~~~~~~~~~~~~v 221 (327)
+++.+++++-. .|++.+|
T Consensus 231 ~v~fL~s~~~i-tGq~I~v 248 (248)
T d2o23a1 231 LVQAIIENPFL-NGEVIRL 248 (248)
T ss_dssp HHHHHHHCTTC-CSCEEEE
T ss_pred HHHHHHhCCCC-CceEeEC
Confidence 99998875443 6776654
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.63 E-value=2.3e-15 Score=124.76 Aligned_cols=155 Identities=16% Similarity=0.111 Sum_probs=113.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHh---CCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--------
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAK---MGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA-------- 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~-------- 75 (327)
|++||||||++-||.+++++|++ +|++|++..|+.++...........+++.++.+|++|++++.++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 46899999999999999999974 6899999999988754322111122579999999999987775543
Q ss_pred -cccEEEEccccccccC------c---chhHhhhhHHHHHHHHHHH----Hc-----------CCcceEEEEeccCCC-C
Q 047628 76 -KANVVINLIGREYETR------N---YSFEDVNHFMAERIAGIAK----EH-----------GGIMRFIQISCLGAS-S 129 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~------~---~~~~~~n~~~~~~l~~a~~----~~-----------~~v~~~v~~Ss~~v~-~ 129 (327)
.+|++||+||...... . ...+++|+.++..+.+++. +. + -.++|.+||.... .
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~-~g~ii~i~S~~g~~~ 160 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVG-RAAIINMSSILGSIQ 160 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTT-TCEEEEECCGGGCST
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccc-ccccccccccccccC
Confidence 3799999998743211 1 2467889988888777653 21 2 2478988886432 2
Q ss_pred --CCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeee
Q 047628 130 --SSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMI 162 (327)
Q Consensus 130 --~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~ 162 (327)
..+ ..|+.+|.+...+.+.. ++.+..+.||.+-
T Consensus 161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 122 47999999988876543 4899999999875
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.63 E-value=4.8e-15 Score=125.20 Aligned_cols=206 Identities=16% Similarity=0.161 Sum_probs=135.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEe---eCCCCCchh---hhccc-CCCCCeeEEeeCCCChhHHHHHhcc---
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVP---FRGCEDDPR---HLKLM-GDLGQIVPMKFNPRDDNTIKATMAK--- 76 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~---~R~~~~~~~---~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~--- 76 (327)
++.||||||++-||+++++.|++.|.+|+.+ .|+.+.... ..... ....++..+.+|++|++++.++++.
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 81 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence 3567899999999999999999999775544 444333211 11111 1225789999999999999887643
Q ss_pred --ccEEEEccccccccC----c----chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCCCCCCC--chHHHhHH
Q 047628 77 --ANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGASSSSP--SRVFSTKA 140 (327)
Q Consensus 77 --~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~ 140 (327)
+|+++++++...... + ...+++|+.++.++.+++ ++.+ -.++|++||.......| ..|+.+|.
T Consensus 82 g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~~~~Y~asKa 160 (285)
T d1jtva_ 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASKF 160 (285)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHHHHHH
T ss_pred cchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCCchHHHHHHH
Confidence 699999998753321 1 346788998888777765 4444 46899999987654444 68999999
Q ss_pred HHHHHHHhh-------CCCeEEEecCeeecCC-Ch---------------hHHHHHHHHhhcCceeeecCCCceecceeH
Q 047628 141 AAEEAVLRE-------LPWATIMRPAAMIGTE-DR---------------LLNKWAQFVKKFNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 141 ~~E~~~~~~-------~~~~~i~r~~~~~G~~-~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 197 (327)
+++.+.+.. ++++..+.||.+--+- ++ ....+..........+ .......
T Consensus 161 al~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~P 233 (285)
T d1jtva_ 161 ALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF-------REAAQNP 233 (285)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH-------HHHCBCH
T ss_pred HHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhh-------cccCCCH
Confidence 998877653 5999999999885321 00 0111111111111111 1134567
Q ss_pred HHHHHHHHHHhhcCCCCCCceEEecC
Q 047628 198 VDVAAAVTAALKDDGTSMGKIYELGG 223 (327)
Q Consensus 198 ~D~a~~~~~~l~~~~~~~~~~~~v~~ 223 (327)
+|+|++++.+++.+.+ ....+.+
T Consensus 234 eeVA~~v~~~~~~~~p---~~ry~~g 256 (285)
T d1jtva_ 234 EEVAEVFLTALRAPKP---TLRYFTT 256 (285)
T ss_dssp HHHHHHHHHHHHCSSC---CSEEESC
T ss_pred HHHHHHHHHHHhCCCC---CeEEecH
Confidence 9999999999998765 2344454
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.62 E-value=1e-14 Score=121.05 Aligned_cols=197 Identities=15% Similarity=0.075 Sum_probs=129.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
|++++||||||++-||.+++++|+++|+ .|++..|+.++.....+..+ .++.++.+|+++++++.++++
T Consensus 1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~--~~~~~~~~Dvs~~~~v~~~~~~i~~~~~ 78 (250)
T d1yo6a1 1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKD--SRVHVLPLTVTCDKSLDTFVSKVGEIVG 78 (250)
T ss_dssp CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCC--TTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhC--CceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence 4568999999999999999999999995 78888998776543222222 468999999999988776542
Q ss_pred --cccEEEEcccccccc----Cc-----chhHhhhhHHHHHHHHHHH----HcC----------CcceEEEEeccCCCCC
Q 047628 76 --KANVVINLIGREYET----RN-----YSFEDVNHFMAERIAGIAK----EHG----------GIMRFIQISCLGASSS 130 (327)
Q Consensus 76 --~~d~vi~~a~~~~~~----~~-----~~~~~~n~~~~~~l~~a~~----~~~----------~v~~~v~~Ss~~v~~~ 130 (327)
++|++||+||..... .. ...+++|+.++..+.+++. +.+ ...+++.+|+......
T Consensus 79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 158 (250)
T d1yo6a1 79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT 158 (250)
T ss_dssp GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence 279999999974321 11 2477889999888877653 211 0135777776433211
Q ss_pred C---------CchHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecc
Q 047628 131 S---------PSRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQP 194 (327)
Q Consensus 131 ~---------~~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (327)
. ...|+.+|.+...+.+.. ++.+..+.||.+--+ + . . ....
T Consensus 159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~---m-~----------------~---~~~~ 215 (250)
T d1yo6a1 159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTN---L-G----------------G---KNAA 215 (250)
T ss_dssp TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCC---C-C----------------C---CCCC
Confidence 1 145999999998877653 489999999977411 1 0 0 0122
Q ss_pred eeHHHHHHHHHHHhhcCCC-CCCceEEecCCccc
Q 047628 195 VYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 195 i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
++.++.++.++..+..... ..|+.|+.. ++++
T Consensus 216 ~~~e~~a~~~~~~~~~~~~~~sG~f~~~~-g~p~ 248 (250)
T d1yo6a1 216 LTVEQSTAELISSFNKLDNSHNGRFFMRN-LKPY 248 (250)
T ss_dssp ---HHHHHHHHHHHTTCCGGGTTCEEETT-EEEC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCeEEECCC-CeeC
Confidence 4568888888888875432 246666543 3444
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.61 E-value=1.1e-14 Score=121.37 Aligned_cols=214 Identities=16% Similarity=0.158 Sum_probs=142.7
Q ss_pred cCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+..+++|||||+| -||+++++.|+++|++|++..|+........+..........+..|+.+..+....+.
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 4578999999998 6889999999999999999999865432211111112356778889988877665553
Q ss_pred cccEEEEccccccccCc-------------chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhH
Q 047628 76 KANVVINLIGREYETRN-------------YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTK 139 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~~-------------~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K 139 (327)
..|.+||+++....... .....+|..+...+.+++...- +-..+|++||.+.....| ..|+.+|
T Consensus 83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sK 162 (258)
T d1qsga_ 83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAK 162 (258)
T ss_dssp SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHH
T ss_pred ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHH
Confidence 35999999876432110 1233455556666666554431 124688899877654444 7899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChh---HHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRL---LNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.+.+.+.. ++++..++||.+..+.... -.......... .|+ ..+...+|+|.++..++.
T Consensus 163 aal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~--~pl-------~R~~~peeia~~v~fL~s 233 (258)
T d1qsga_ 163 ASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAV--TPI-------RRTVTIEDVGNSAAFLCS 233 (258)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHH--STT-------SSCCCHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhC--CCC-------CCCcCHHHHHHHHHHHhC
Confidence 9999988764 3899999999987553221 12222222211 221 124567999999999996
Q ss_pred cCC-CCCCceEEecCCccc
Q 047628 210 DDG-TSMGKIYELGGPDIF 227 (327)
Q Consensus 210 ~~~-~~~~~~~~v~~~~~~ 227 (327)
+.. ...|+++.+.++.++
T Consensus 234 ~~s~~itG~~i~vDGG~~i 252 (258)
T d1qsga_ 234 DLSAGISGEVVHVDGGFSI 252 (258)
T ss_dssp GGGTTCCSCEEEESTTGGG
T ss_pred chhcCccCceEEECcCHHH
Confidence 543 237899999998654
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.58 E-value=8.6e-14 Score=114.20 Aligned_cols=190 Identities=11% Similarity=0.006 Sum_probs=128.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHH-------Hhc--cc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKA-------TMA--KA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~-------~~~--~~ 77 (327)
.|+||||||+|-||+++++.|+++|++|.+++|....... ....+.+|..+.+.... .+. ++
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 72 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---------ASVIVKMTDSFTEQADQVTAEVGKLLGDQKV 72 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---------EEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc---------ccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence 5799999999999999999999999999999887654321 22334455544433322 222 37
Q ss_pred cEEEEccccccc-----cCc----chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 78 NVVINLIGREYE-----TRN----YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 78 d~vi~~a~~~~~-----~~~----~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
|++||+||.... ... ...+++|+.++.++.+++...- +-.++|++||.......| ..|+.+|.+++.+
T Consensus 73 D~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 152 (236)
T d1dhra_ 73 DAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQL 152 (236)
T ss_dssp EEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHH
T ss_pred eEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHH
Confidence 999999985221 111 2356888888888888776531 124899999987655444 6899999999999
Q ss_pred HHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CC
Q 047628 146 VLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SM 215 (327)
Q Consensus 146 ~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~ 215 (327)
.+.. ++++..+.||.+.- .+ .+... + ....-.++..+|+|+.+..++..... ..
T Consensus 153 t~~la~El~~~~~gI~vn~v~PG~v~T---~~----~~~~~--~-------~~~~~~~~~pe~va~~~~~l~s~~~~~i~ 216 (236)
T d1dhra_ 153 CQSLAGKNSGMPSGAAAIAVLPVTLDT---PM----NRKSM--P-------EADFSSWTPLEFLVETFHDWITGNKRPNS 216 (236)
T ss_dssp HHHHTSTTSSCCTTCEEEEEEESCEEC---HH----HHHHS--T-------TSCGGGSEEHHHHHHHHHHHHTTTTCCCT
T ss_pred HHHHHHHhccCCCcEEEEEEEeccCcC---Cc----chhhC--c-------cchhhcCCCHHHHHHHHHHHhCCCccCCC
Confidence 8764 37788899998862 11 11111 1 11123567789999999998876542 25
Q ss_pred CceEEe
Q 047628 216 GKIYEL 221 (327)
Q Consensus 216 ~~~~~v 221 (327)
|+.+.+
T Consensus 217 G~~i~v 222 (236)
T d1dhra_ 217 GSLIQV 222 (236)
T ss_dssp TCEEEE
T ss_pred CCeEEE
Confidence 666655
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.57 E-value=4e-14 Score=116.22 Aligned_cols=191 Identities=13% Similarity=0.032 Sum_probs=127.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHH-------HHh--ccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK-------ATM--AKA 77 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~-------~~~--~~~ 77 (327)
..|||||||+|-||++++++|+++|++|++++|+...... ....+.+|..+.+... ..+ ..+
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 72 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD---------SNILVDGNKNWTEQEQSILEQTASSLQGSQV 72 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS---------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc---------ccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence 3589999999999999999999999999999998764321 2334455665443332 222 237
Q ss_pred cEEEEcccccccc-----C----cchhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCCCCCCC--chHHHhHHHHHHH
Q 047628 78 NVVINLIGREYET-----R----NYSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGASSSSP--SRVFSTKAAAEEA 145 (327)
Q Consensus 78 d~vi~~a~~~~~~-----~----~~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~ 145 (327)
|++||+||..... . -+..+++|+.++..+.+++...- +-.++|++||.......| ..|+.+|.+++.+
T Consensus 73 D~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l 152 (235)
T d1ooea_ 73 DGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHL 152 (235)
T ss_dssp EEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHH
T ss_pred eEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHH
Confidence 9999999863211 1 12357888888888888776531 024899999977655554 7899999999999
Q ss_pred HHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC--CC
Q 047628 146 VLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG--TS 214 (327)
Q Consensus 146 ~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~--~~ 214 (327)
.+.. ++.+..+.||.+- .... +..... .....++..+|+++.++..+..+. ..
T Consensus 153 ~~~la~e~~~~~~~i~v~~i~Pg~~~---T~~~----~~~~~~---------~~~~~~~~~~~va~~~~~~l~~~~~~~~ 216 (235)
T d1ooea_ 153 TSSLAAKDSGLPDNSAVLTIMPVTLD---TPMN----RKWMPN---------ADHSSWTPLSFISEHLLKWTTETSSRPS 216 (235)
T ss_dssp HHHHHSTTSSCCTTCEEEEEEESCBC---CHHH----HHHSTT---------CCGGGCBCHHHHHHHHHHHHHCGGGCCC
T ss_pred HHHHHHHhccCCCceEEEEEecCcCc---Ccch----hhhCcC---------CccccCCCHHHHHHHHHHHhcCccccCC
Confidence 8764 2566778888774 2111 111111 112356788999999876665432 12
Q ss_pred CCceEEec
Q 047628 215 MGKIYELG 222 (327)
Q Consensus 215 ~~~~~~v~ 222 (327)
.|..+.+.
T Consensus 217 tG~~i~v~ 224 (235)
T d1ooea_ 217 SGALLKIT 224 (235)
T ss_dssp TTCEEEEE
T ss_pred CceEEEEE
Confidence 57777773
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.55 E-value=7.5e-14 Score=117.95 Aligned_cols=212 Identities=14% Similarity=0.056 Sum_probs=136.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh----cccCCC----------------CCeeEEeeCCCCh
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL----KLMGDL----------------GQIVPMKFNPRDD 67 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~----~~~~~~----------------~~v~~~~~Dl~~~ 67 (327)
..++||||++-||+++++.|+++|++|.+..|+.......+ ...... ..+....+|++++
T Consensus 3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~ 82 (284)
T d1e7wa_ 3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF 82 (284)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence 56899999999999999999999999999887654322221 111100 1223345668888
Q ss_pred hHHHHHhc-------cccEEEEccccccccCc----------------------chhHhhhhHHHHHHHHHHHHc-----
Q 047628 68 NTIKATMA-------KANVVINLIGREYETRN----------------------YSFEDVNHFMAERIAGIAKEH----- 113 (327)
Q Consensus 68 ~~~~~~~~-------~~d~vi~~a~~~~~~~~----------------------~~~~~~n~~~~~~l~~a~~~~----- 113 (327)
+++.++++ .+|++||+||....... ...+.+|+.++..+.+++...
T Consensus 83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 162 (284)
T d1e7wa_ 83 TRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTP 162 (284)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhH
Confidence 87776653 47999999997532110 024567787877777765431
Q ss_pred ----CCcceEEEEeccCCCCCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcC
Q 047628 114 ----GGIMRFIQISCLGASSSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFN 180 (327)
Q Consensus 114 ----~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~ 180 (327)
+...++|.+++.......+ ..|+.+|.+++.+.+.. ++++..+.||.+--. ...-..........
T Consensus 163 ~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~-~~~~~~~~~~~~~~- 240 (284)
T d1e7wa_ 163 AKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV-DDMPPAVWEGHRSK- 240 (284)
T ss_dssp GGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCG-GGSCHHHHHHHHTT-
T ss_pred HHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccc-ccCCHHHHHHHHhc-
Confidence 1123677777766554443 68999999999888764 488999999964211 11112222222221
Q ss_pred ceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCcccc
Q 047628 181 FFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 181 ~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
.+.. ..+...+|+|++++.++..... ..|+++.+.|+.++|
T Consensus 241 -~pl~------~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 241 -VPLY------QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp -CTTT------TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred -CCCC------CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 2211 1245679999999999875432 279999999987654
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.55 E-value=1e-13 Score=116.57 Aligned_cols=212 Identities=10% Similarity=0.060 Sum_probs=134.0
Q ss_pred cCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc-CCCCCeeEEeeCCCChhHHHHHhc------
Q 047628 5 YSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM-GDLGQIVPMKFNPRDDNTIKATMA------ 75 (327)
Q Consensus 5 ~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~------ 75 (327)
++.+++|||||+| -||.+++++|+++|++|+++.|+.+.. ....+. .......+..+|+++++++.++++
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~-~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 81 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLE-KRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL 81 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTH-HHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc
Confidence 4678999999987 699999999999999999999985432 222211 112456788999999887776653
Q ss_pred -cccEEEEccccccccC---c-----chhHh----hhhHHHHHHHHHHHHcCC-cceEEEEeccCCCCCC--CchHHHhH
Q 047628 76 -KANVVINLIGREYETR---N-----YSFED----VNHFMAERIAGIAKEHGG-IMRFIQISCLGASSSS--PSRVFSTK 139 (327)
Q Consensus 76 -~~d~vi~~a~~~~~~~---~-----~~~~~----~n~~~~~~l~~a~~~~~~-v~~~v~~Ss~~v~~~~--~~~y~~~K 139 (327)
.+|++||+++...... . +.... .+......+........+ -..++.+|+.+..... ...|+.+|
T Consensus 82 g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK 161 (274)
T d2pd4a1 82 GSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAK 161 (274)
T ss_dssp SCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHH
T ss_pred CCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHH
Confidence 4699999998743211 1 11111 111222233333322211 2245555655544333 37899999
Q ss_pred HHHHHHHHhh-------CCCeEEEecCeeecCCChhH---HHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 140 AAAEEAVLRE-------LPWATIMRPAAMIGTEDRLL---NKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 140 ~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
.+.+.+.+.. ++++..+.||.+.-+..... ...........+. ..+...+|+|.++..++.
T Consensus 162 ~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------~r~~~pedIA~~v~fL~S 232 (274)
T d2pd4a1 162 AALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL---------RKNVSLEEVGNAGMYLLS 232 (274)
T ss_dssp HHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT---------SSCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc---------cCCcCHHHHHHHHHHHhC
Confidence 9999887753 48999999998875432111 1222222211111 244678999999999987
Q ss_pred cCC-CCCCceEEecCCcc
Q 047628 210 DDG-TSMGKIYELGGPDI 226 (327)
Q Consensus 210 ~~~-~~~~~~~~v~~~~~ 226 (327)
... ...|+++.+.++.+
T Consensus 233 ~~s~~itG~~i~vDGG~~ 250 (274)
T d2pd4a1 233 SLSSGVSGEVHFVDAGYH 250 (274)
T ss_dssp GGGTTCCSCEEEESTTGG
T ss_pred hhhCCCcCceEEECCChh
Confidence 644 22789999999864
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.54 E-value=1.1e-13 Score=115.92 Aligned_cols=215 Identities=12% Similarity=-0.021 Sum_probs=133.6
Q ss_pred cCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
+..+++|||||+| -||.+++++|+++|++|++..|+..+....+.+.. ..+...+++|+.+++++.++++
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL-PAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS-SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHc-CCceeeEeeecccccccccccchhhhccc
Confidence 5678999999765 59999999999999999999998765433333221 1357788999999876654432
Q ss_pred ---cccEEEEcccccccc--Cc-----------chhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCC--chHHH
Q 047628 76 ---KANVVINLIGREYET--RN-----------YSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSP--SRVFS 137 (327)
Q Consensus 76 ---~~d~vi~~a~~~~~~--~~-----------~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~--~~y~~ 137 (327)
..|+++|+++..... .. ...+.+|.........++....+-...+.+++.......| ..|+.
T Consensus 83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~ 162 (268)
T d2h7ma1 83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTV 162 (268)
T ss_dssp TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHH
T ss_pred cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhc
Confidence 259999999864221 11 0122333444444444443332122344455544433333 78999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecC---------CCh----hHHHHHHHHhhcCceeeecCCCceecceeH
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGT---------EDR----LLNKWAQFVKKFNFFPLFGDGSTRIQPVYV 197 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~---------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 197 (327)
+|.+.+.+.+.. ++++..+.||.+-.+ ... ....+.....+.-++. +.+...
T Consensus 163 sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~--------rr~~~p 234 (268)
T d2h7ma1 163 AKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG--------WNMKDA 234 (268)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC--------CCTTCC
T ss_pred cccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC--------CCCCCH
Confidence 999999988754 489999999987532 010 1111111121111111 224456
Q ss_pred HHHHHHHHHHhhcCCC-CCCceEEecCCcccc
Q 047628 198 VDVAAAVTAALKDDGT-SMGKIYELGGPDIFT 228 (327)
Q Consensus 198 ~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~s 228 (327)
+|+|+++..++.+... ..|+++.+.++...+
T Consensus 235 ~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~~ 266 (268)
T d2h7ma1 235 TPVAKTVCALLSDWLPATTGDIIYADGGAHTQ 266 (268)
T ss_dssp HHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred HHHHHHHHHHhCchhcCccCCEEEECcCcccc
Confidence 9999999999965432 278999999986543
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.54 E-value=9.6e-14 Score=114.39 Aligned_cols=199 Identities=16% Similarity=0.075 Sum_probs=134.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhcc------ccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK------ANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~------~d~vi 81 (327)
|++|||||++-||+++++.|+++|++|.+.+|+.+.. +...+++|+.+......+... .+.++
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 70 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-----------DLIYVEGDVTREEDVRRAVARAQEEAPLFAVV 70 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-----------SSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-----------cceEeeccccchhhhHHHHHhhhccccccchh
Confidence 6899999999999999999999999999999987652 466778999887766555432 34555
Q ss_pred Eccccccc---------c---CcchhHhhhhHHHHHHHHHHHHc----------CCcceEEEEeccCCCCC--CCchHHH
Q 047628 82 NLIGREYE---------T---RNYSFEDVNHFMAERIAGIAKEH----------GGIMRFIQISCLGASSS--SPSRVFS 137 (327)
Q Consensus 82 ~~a~~~~~---------~---~~~~~~~~n~~~~~~l~~a~~~~----------~~v~~~v~~Ss~~v~~~--~~~~y~~ 137 (327)
+.++.... . .....+++|+.+...+...+... + -.++|++||...... ....|+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~~~~~~~~~Y~a 149 (241)
T d1uaya_ 71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQ-RGVIVNTASVAAFEGQIGQAAYAA 149 (241)
T ss_dssp ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSC-SEEEEEECCTHHHHCCTTCHHHHH
T ss_pred hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccC-ceeeeeecchhhccCCCCchhhHH
Confidence 55443211 0 01245677888777777765432 2 248999999765433 3378999
Q ss_pred hHHHHHHHHHhh-------CCCeEEEecCeeecCCC-hhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhh
Q 047628 138 TKAAAEEAVLRE-------LPWATIMRPAAMIGTED-RLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALK 209 (327)
Q Consensus 138 ~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~ 209 (327)
+|.+++.+.+.. ++++..+.||.+--+.. ............ ..+.. -.+...+|+|.+++.+++
T Consensus 150 sKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~--~~~~~------~R~g~pedvA~~v~fL~s 221 (241)
T d1uaya_ 150 SKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAA--QVPFP------PRLGRPEEYAALVLHILE 221 (241)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHT--TCCSS------CSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHh--cCCCC------CCCcCHHHHHHHHHHHHh
Confidence 999999888754 48999999998853210 111111111111 12221 124567999999999998
Q ss_pred cCCCCCCceEEecCCccc
Q 047628 210 DDGTSMGKIYELGGPDIF 227 (327)
Q Consensus 210 ~~~~~~~~~~~v~~~~~~ 227 (327)
.+-. .|+++.+.|+-.+
T Consensus 222 ~~~i-TG~~i~VDGG~~m 238 (241)
T d1uaya_ 222 NPML-NGEVVRLDGALRM 238 (241)
T ss_dssp CTTC-CSCEEEESTTCCC
T ss_pred CCCC-CCCEEEECCcccC
Confidence 5544 7999999987543
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.53 E-value=1.4e-13 Score=115.23 Aligned_cols=190 Identities=16% Similarity=0.050 Sum_probs=130.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhccc--CCCCCeeEEeeCCCChhHHHHHhc-------
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLM--GDLGQIVPMKFNPRDDNTIKATMA------- 75 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~v~~~~~Dl~~~~~~~~~~~------- 75 (327)
++.+++||||||+-||+++++.|+++|++|++++|+.++........ .....+..+.+|..+.+.....++
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 91 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 91 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence 56789999999999999999999999999999999876644332211 112457788999988776655442
Q ss_pred cccEEEEccccccccC----c----chhHhhhhHHHHHHHHHHH----HcCCcceEEEEeccCCCCCCC--chHHHhHHH
Q 047628 76 KANVVINLIGREYETR----N----YSFEDVNHFMAERIAGIAK----EHGGIMRFIQISCLGASSSSP--SRVFSTKAA 141 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~----~----~~~~~~n~~~~~~l~~a~~----~~~~v~~~v~~Ss~~v~~~~~--~~y~~~K~~ 141 (327)
..|+++++|+...... . ...+++|+.++..+.+++. +.+ .++|.+||.......| ..|+.+|.+
T Consensus 92 ~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~~~~p~~~~Y~asKaa 169 (269)
T d1xu9a_ 92 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFA 169 (269)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGTSCCTTCHHHHHHHHH
T ss_pred CccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhcCCCCCchHHHHHHHH
Confidence 4799999998743221 1 2467888887777766653 333 4889999977665555 789999999
Q ss_pred HHHHHHhh---------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCC
Q 047628 142 AEEAVLRE---------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDG 212 (327)
Q Consensus 142 ~E~~~~~~---------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~ 212 (327)
++.+.+.. ++.+..+.||.+- ... ..... . +.........+++|+.++..+....
T Consensus 170 l~~~~~~La~El~~~~~~I~V~~v~PG~v~---T~~----~~~~~--~-------~~~~~~~~~~e~~a~~i~~~~~~~~ 233 (269)
T d1xu9a_ 170 LDGFFSSIRKEYSVSRVNVSITLCVLGLID---TET----AMKAV--S-------GIVHMQAAPKEECALEIIKGGALRQ 233 (269)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEEECCBC---CHH----HHHHS--C-------GGGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhhcCCCEEEEEEecCcCC---CcH----HHHhc--c-------CCccccCCCHHHHHHHHHHHhhcCC
Confidence 98876543 2677889999874 111 11111 0 1111234567889988888776554
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.45 E-value=1.1e-13 Score=116.25 Aligned_cols=155 Identities=14% Similarity=0.090 Sum_probs=111.8
Q ss_pred cEE-EEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccC-CCCCeeEEeeCCCChhHHHHHhc-------cc
Q 047628 8 IIA-TVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMG-DLGQIVPMKFNPRDDNTIKATMA-------KA 77 (327)
Q Consensus 8 ~~i-lI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~-------~~ 77 (327)
|+| |||||++-||..++++|+++ |++|++..|+.++.....+++. ...++.++++|+++.+++.++++ .+
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~i 82 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 82 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence 455 89999999999999999986 8999999999876543332221 12568899999999998876653 47
Q ss_pred cEEEEccccccccCc--------chhHhhhhHHHHHHHHHHHHcC-CcceEEEEeccCC---------------------
Q 047628 78 NVVINLIGREYETRN--------YSFEDVNHFMAERIAGIAKEHG-GIMRFIQISCLGA--------------------- 127 (327)
Q Consensus 78 d~vi~~a~~~~~~~~--------~~~~~~n~~~~~~l~~a~~~~~-~v~~~v~~Ss~~v--------------------- 127 (327)
|++||+||....... ...+++|+.++..+.+++...= +-.++|.+||...
T Consensus 83 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~ 162 (275)
T d1wmaa1 83 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETIT 162 (275)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCC
T ss_pred EEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccc
Confidence 999999998543211 2367889999999998876431 0138999998432
Q ss_pred ---------------------CCC-CCchHHHhHHHHHHHHHh-----------hCCCeEEEecCeee
Q 047628 128 ---------------------SSS-SPSRVFSTKAAAEEAVLR-----------ELPWATIMRPAAMI 162 (327)
Q Consensus 128 ---------------------~~~-~~~~y~~~K~~~E~~~~~-----------~~~~~~i~r~~~~~ 162 (327)
... ....|+.+|.....+.+. .++.+..+.||++-
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~ 230 (275)
T d1wmaa1 163 EEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVR 230 (275)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBC
T ss_pred hhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeccccc
Confidence 001 115699999987665432 15888999999875
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.44 E-value=1.3e-11 Score=104.66 Aligned_cols=216 Identities=11% Similarity=0.071 Sum_probs=133.5
Q ss_pred CCcccCCcEEEEEcCCC--ccHHHHHHHHHhCCCEEEEeeCCCCCc------------hhhhcccCCCCCe-eEEeeC--
Q 047628 1 MTYVYSGIIATVFGTTG--FLGRYVVQQLAKMGSQVLVPFRGCEDD------------PRHLKLMGDLGQI-VPMKFN-- 63 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~------------~~~~~~~~~~~~v-~~~~~D-- 63 (327)
|+++++.|++|||||+| -||+.+++.|+++|.+|++..|++... ...........+. ....+|
T Consensus 2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (297)
T d1d7oa_ 2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV 81 (297)
T ss_dssp CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence 78889999999999987 799999999999999999988754211 0000000000011 111222
Q ss_pred C---------------------CChhHH----HHHhccccEEEEccccccc-c------Cc---chhHhhhhHHHHHHHH
Q 047628 64 P---------------------RDDNTI----KATMAKANVVINLIGREYE-T------RN---YSFEDVNHFMAERIAG 108 (327)
Q Consensus 64 l---------------------~~~~~~----~~~~~~~d~vi~~a~~~~~-~------~~---~~~~~~n~~~~~~l~~ 108 (327)
+ .+.+.+ .+.+.++|++||+||.... . +. ...+++|+.+...+.+
T Consensus 82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~ 161 (297)
T d1d7oa_ 82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS 161 (297)
T ss_dssp CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence 1 122222 2223468999999986321 1 11 2366788888888888
Q ss_pred HHHHcCC-cceEEEEeccCCC---CCCCchHHHhHHHHHHHHHh--------hCCCeEEEecCeeecCCCh---hHHHHH
Q 047628 109 IAKEHGG-IMRFIQISCLGAS---SSSPSRVFSTKAAAEEAVLR--------ELPWATIMRPAAMIGTEDR---LLNKWA 173 (327)
Q Consensus 109 a~~~~~~-v~~~v~~Ss~~v~---~~~~~~y~~~K~~~E~~~~~--------~~~~~~i~r~~~~~G~~~~---~~~~~~ 173 (327)
++..... -.+.+.+++.+.. ......|..+|...+.+.+. .++++..+.||.+..+... ....+.
T Consensus 162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~ 241 (297)
T d1d7oa_ 162 HFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI 241 (297)
T ss_dssp HHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred HHHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHH
Confidence 7765420 1234555554332 23346799999887766542 4699999999998765322 223333
Q ss_pred HHHhhcCceeeecCCCceecceeHHHHHHHHHHHhhcCCC-CCCceEEecCCc
Q 047628 174 QFVKKFNFFPLFGDGSTRIQPVYVVDVAAAVTAALKDDGT-SMGKIYELGGPD 225 (327)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~ 225 (327)
....+. .|+ ..+...+|+|.+++.++..... ..|+++.+.++.
T Consensus 242 ~~~~~~--~Pl-------gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 242 EYSYNN--API-------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHHHH--SSS-------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHhC--CCC-------CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 333322 222 1345679999999999975432 278999999874
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.44 E-value=2.7e-12 Score=107.11 Aligned_cols=210 Identities=15% Similarity=0.129 Sum_probs=129.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhh----cccCCCCCeeEEeeCCCC----hhHHHHH------
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHL----KLMGDLGQIVPMKFNPRD----DNTIKAT------ 73 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~----~~~~~~~~v~~~~~Dl~~----~~~~~~~------ 73 (327)
...|||||++-||++++++|+++|++|++.+|+.++..+.+ .... ..+...+..|..+ .+.+.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAAR-AGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 80 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHS-TTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhc-CCceEEEecccccchhHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999876532221 1111 1345566666543 2333332
Q ss_pred -hccccEEEEccccccccCc-------------------chhHhhhhHHHHHHHHHHHHc--------CCcceEEEEecc
Q 047628 74 -MAKANVVINLIGREYETRN-------------------YSFEDVNHFMAERIAGIAKEH--------GGIMRFIQISCL 125 (327)
Q Consensus 74 -~~~~d~vi~~a~~~~~~~~-------------------~~~~~~n~~~~~~l~~a~~~~--------~~v~~~v~~Ss~ 125 (327)
+..+|++||+||....... ......|.............. .....++.+|+.
T Consensus 81 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (266)
T d1mxha_ 81 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA 160 (266)
T ss_dssp HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred HhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence 2358999999997532110 112233333333333333221 102355666665
Q ss_pred CCCCCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCChhHHHHHHHHhhcCceeeecCCCceeccee
Q 047628 126 GASSSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTEDRLLNKWAQFVKKFNFFPLFGDGSTRIQPVY 196 (327)
Q Consensus 126 ~v~~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 196 (327)
......| ..|+.+|..++.+.+.. ++++..+.||.+.-+.... ........+. .++ + +.+..
T Consensus 161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-~~~~~~~~~~--~pl-~-----r~~~~ 231 (266)
T d1mxha_ 161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-QETQEEYRRK--VPL-G-----QSEAS 231 (266)
T ss_dssp GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-HHHHHHHHTT--CTT-T-----SCCBC
T ss_pred cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-HHHHHHHHhc--CCC-C-----CCCCC
Confidence 5544443 78999999999887654 4899999999876443211 2222222222 221 1 12356
Q ss_pred HHHHHHHHHHHhhcCCC-CCCceEEecCCccc
Q 047628 197 VVDVAAAVTAALKDDGT-SMGKIYELGGPDIF 227 (327)
Q Consensus 197 ~~D~a~~~~~~l~~~~~-~~~~~~~v~~~~~~ 227 (327)
.+|+|.+++.++.+... ..|+++.+.|+-.+
T Consensus 232 peeva~~v~fL~s~~s~~itG~~i~vDGG~~l 263 (266)
T d1mxha_ 232 AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 263 (266)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence 79999999999976542 27899999997544
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.29 E-value=8.8e-11 Score=97.18 Aligned_cols=193 Identities=15% Similarity=0.056 Sum_probs=116.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh--------cccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM--------AKAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--------~~~d 78 (327)
|+.|+||||++-||++++++|+++|++|++++|+..+. ..|+.+.+...... ..+|
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~----------------~~d~~~~~~~~~~~~~~~~~~~~~id 64 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV----------------IADLSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSE----------------ECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHH----------------HHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence 46789999999999999999999999999999875432 34555554443322 2379
Q ss_pred EEEEccccccccCc-chhHhhhhHHHHHHHHHH----HHcCCcceEEEEeccCC--------------------------
Q 047628 79 VVINLIGREYETRN-YSFEDVNHFMAERIAGIA----KEHGGIMRFIQISCLGA-------------------------- 127 (327)
Q Consensus 79 ~vi~~a~~~~~~~~-~~~~~~n~~~~~~l~~a~----~~~~~v~~~v~~Ss~~v-------------------------- 127 (327)
+++++|+....... .....+|..+...+.+.. .... ......+++...
T Consensus 65 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~ 143 (257)
T d1fjha_ 65 GLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIV 143 (257)
T ss_dssp EEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHH
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeeh
Confidence 99999987543322 234455666665555543 2333 334444444211
Q ss_pred -C-CCCC--chHHHhHHHHHHHHHhh-------CCCeEEEecCeeecCCC-hhHH--HHHHHHhhcCceeeecCCCceec
Q 047628 128 -S-SSSP--SRVFSTKAAAEEAVLRE-------LPWATIMRPAAMIGTED-RLLN--KWAQFVKKFNFFPLFGDGSTRIQ 193 (327)
Q Consensus 128 -~-~~~~--~~y~~~K~~~E~~~~~~-------~~~~~i~r~~~~~G~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 193 (327)
. ...+ ..|+.+|.+.+.+.+.. ++++..+.||.+-.+.- ..+. .+.....+ ...| .-.
T Consensus 144 ~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~~~P-------lgR 215 (257)
T d1fjha_ 144 EHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAK-FVPP-------MGR 215 (257)
T ss_dssp HTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------CCCS-------TTS
T ss_pred hccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHh-cCCC-------CCC
Confidence 0 0111 35999999999988764 49999999998854311 1110 01110000 0011 113
Q ss_pred ceeHHHHHHHHHHHhhcCCC-CCCceEEecCC
Q 047628 194 PVYVVDVAAAVTAALKDDGT-SMGKIYELGGP 224 (327)
Q Consensus 194 ~i~~~D~a~~~~~~l~~~~~-~~~~~~~v~~~ 224 (327)
+...+|+|.++..++..... ..|+++.+.|+
T Consensus 216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 216 RAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp CCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 45679999999999865432 27899999886
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.26 E-value=1.7e-12 Score=102.66 Aligned_cols=85 Identities=18% Similarity=0.099 Sum_probs=70.4
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
.+++.++++||||+|.||+.+++.|+++|.+|+++.|+.++............++....+|+.+.+++.+++.++|+|||
T Consensus 19 ~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin 98 (191)
T d1luaa1 19 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFT 98 (191)
T ss_dssp SCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeee
Confidence 35678999999999999999999999999999999999876443333222113467788999999999999999999999
Q ss_pred ccccc
Q 047628 83 LIGRE 87 (327)
Q Consensus 83 ~a~~~ 87 (327)
++|..
T Consensus 99 ~Ag~g 103 (191)
T d1luaa1 99 AGAIG 103 (191)
T ss_dssp CCCTT
T ss_pred cCccc
Confidence 99864
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.26 E-value=6.6e-11 Score=101.54 Aligned_cols=156 Identities=12% Similarity=0.070 Sum_probs=99.1
Q ss_pred CcEEEEEc--CCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh------------hcccCC-CCCeeEEe----------
Q 047628 7 GIIATVFG--TTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH------------LKLMGD-LGQIVPMK---------- 61 (327)
Q Consensus 7 ~~~ilI~G--atG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~------------~~~~~~-~~~v~~~~---------- 61 (327)
.+.+|||| ++.-||+.+++.|+++|.+|.+..|........ .....+ ........
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence 47899999 556899999999999999999987754321100 000000 00111222
Q ss_pred ----------eCCCChhHHHHH-------hccccEEEEcccccccc-------Cc---chhHhhhhHHHHHHHHHHHHcC
Q 047628 62 ----------FNPRDDNTIKAT-------MAKANVVINLIGREYET-------RN---YSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 62 ----------~Dl~~~~~~~~~-------~~~~d~vi~~a~~~~~~-------~~---~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
+|+.+.+++.++ +.++|++||++|..... +. ...+++|+.++..+.+++...-
T Consensus 82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m 161 (329)
T d1uh5a_ 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence 244444333333 34589999998864321 11 2355777777777777776541
Q ss_pred -CcceEEEEeccCCCCCCC---chHHHhHHHHHHHHHh--------hCCCeEEEecCeee
Q 047628 115 -GIMRFIQISCLGASSSSP---SRVFSTKAAAEEAVLR--------ELPWATIMRPAAMI 162 (327)
Q Consensus 115 -~v~~~v~~Ss~~v~~~~~---~~y~~~K~~~E~~~~~--------~~~~~~i~r~~~~~ 162 (327)
+-.++|.+||.+.....| ..|+.+|.+++.+.+. +++++..+.||.+-
T Consensus 162 ~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 162 KPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp EEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred ccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 124788888876654444 4689999999887753 36999999999763
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.75 E-value=2.2e-08 Score=73.56 Aligned_cols=94 Identities=18% Similarity=0.235 Sum_probs=70.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~~ 86 (327)
|+|+|+|+ |.+|+.+++.|.+.|++|++++++++.... +... -+..++.+|.++++.+.++ ++++|+++-+...
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~-~~~~---~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~ 75 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKK-ASAE---IDALVINGDCTKIKTLEDAGIEDADMYIAVTGK 75 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHH---CSSEEEESCTTSHHHHHHTTTTTCSEEEECCSC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhh-hhhh---hhhhhccCcccchhhhhhcChhhhhhhcccCCc
Confidence 78999999 999999999999999999999998765332 2221 1478899999999999987 5789999876532
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcceEE
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v 120 (327)
. +.|+. +...++..+ ++++|
T Consensus 76 d---------~~N~~----~~~~~k~~~-~~~iI 95 (132)
T d1lssa_ 76 E---------EVNLM----SSLLAKSYG-INKTI 95 (132)
T ss_dssp H---------HHHHH----HHHHHHHTT-CCCEE
T ss_pred H---------HHHHH----HHHHHHHcC-CceEE
Confidence 1 23332 333556777 66665
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.56 E-value=2.3e-07 Score=68.57 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=76.9
Q ss_pred EEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
||.|+||+|.+|++++..|..+| .++.+++.++.+ ..........-...... .....+..+.++++|+||.++|.
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~--~~a~Dl~~~~~~~~~~~-~~~~~~~~~~~~~aDivVitag~ 78 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTP--GVAADLSHIETRATVKG-YLGPEQLPDCLKGCDVVVIPAGV 78 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHH--HHHHHHTTSSSSCEEEE-EESGGGHHHHHTTCSEEEECCSC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccc--hhhHHHhhhhhhcCCCe-EEcCCChHHHhCCCCEEEECCCc
Confidence 79999999999999999998887 478888875422 11111111000111111 12356677888999999999996
Q ss_pred cc--ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 87 EY--ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 87 ~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
.. ..+..+....|....+.+++.+++++ .+-++.+-|
T Consensus 79 ~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~-p~~iiivvt 117 (144)
T d1mlda1 79 PRKPGMTRDDLFNTNATIVATLTAACAQHC-PDAMICIIS 117 (144)
T ss_dssp CCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred CCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCeEEEEec
Confidence 43 34457788999999999999999998 455554443
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.44 E-value=2.7e-07 Score=68.45 Aligned_cols=110 Identities=11% Similarity=0.070 Sum_probs=72.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhh---hcc-cCCCCCeeEEeeCCCChhHHHHHhccccE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRH---LKL-MGDLGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~---~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
+.|||.|+|+ |++|+.++..|+.+| .++++++++....... +.. ...........+|+ + .++++|+
T Consensus 4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~----~~~~adi 75 (146)
T d1ez4a1 4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S----DCKDADL 75 (146)
T ss_dssp TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G----GGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H----HhccccE
Confidence 4689999996 999999999999987 6899999876442211 110 00012234444442 2 4678999
Q ss_pred EEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 80 VINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 80 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
||.++|.... ....+....|....+.+++.+.+.+ .+-++.+-|
T Consensus 76 vvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~-p~aivivvt 121 (146)
T d1ez4a1 76 VVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAA 121 (146)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred EEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEeC
Confidence 9999987543 3445677889999999999999988 555554443
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.35 E-value=3.4e-06 Score=62.16 Aligned_cols=85 Identities=11% Similarity=0.048 Sum_probs=54.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC----CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG----SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|++|.|+||||++|+.+++.|+++. .+++++.++.+........ .-.....++.+.+ .+.++|++|.
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-----~~~~~~~~~~~~~----~~~~~DivF~ 71 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-----GTTGTLQDAFDLE----ALKALDIIVT 71 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-----TCCCBCEETTCHH----HHHTCSEEEE
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-----CCceeeecccchh----hhhcCcEEEE
Confidence 4689999999999999999888763 3677777665442211111 0111122333333 3568999999
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
+++. .....+...+.+.|
T Consensus 72 a~~~--------------~~s~~~~~~~~~~g 89 (146)
T d1t4ba1 72 CQGG--------------DYTNEIYPKLRESG 89 (146)
T ss_dssp CSCH--------------HHHHHHHHHHHHTT
T ss_pred ecCc--------------hHHHHhhHHHHhcC
Confidence 9854 23456777777777
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.33 E-value=6.7e-07 Score=68.83 Aligned_cols=75 Identities=27% Similarity=0.402 Sum_probs=58.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+++|+|+|| |++|+++++.|.++|++|++++|+.++........ +.......+..........+...|.++.+..
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~ 76 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV---QHSTPISLDVNDDAALDAEVAKHDLVISLIP 76 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTC---TTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcc---cccccccccccchhhhHhhhhccceeEeecc
Confidence 579999998 99999999999999999999999987644332222 3455555666677778888888899887654
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.33 E-value=2.1e-06 Score=63.28 Aligned_cols=109 Identities=16% Similarity=0.148 Sum_probs=71.7
Q ss_pred cEEEEEcCCCccHHHHHHHHH-hC--CCEEEEeeCCCCCchhh---hcccCCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLA-KM--GSQVLVPFRGCEDDPRH---LKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll-~~--g~~V~~~~R~~~~~~~~---~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
|||.|+|++|.+|++++-.|. +. ..++.+++..+ ..... +...........+ . ..+.. +.++++|+||
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~-~---~~~~~-~~~~~aDvvv 74 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGF-S---GEDAT-PALEGADVVL 74 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEE-C---SSCCH-HHHTTCSEEE
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEE-E---cCCCc-cccCCCCEEE
Confidence 789999999999999998775 43 37899998753 22111 1111101111221 1 11222 3578999999
Q ss_pred Ecccccc--ccCcchhHhhhhHHHHHHHHHHHHcCCcce-EEEEe
Q 047628 82 NLIGREY--ETRNYSFEDVNHFMAERIAGIAKEHGGIMR-FIQIS 123 (327)
Q Consensus 82 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~-~v~~S 123 (327)
.++|... ..+..+....|....+.+.+.+.+.+ .+. ++.+|
T Consensus 75 itaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~-p~aivivvt 118 (145)
T d2cmda1 75 ISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTC-PKACIGIIT 118 (145)
T ss_dssp ECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECS
T ss_pred ECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhC-CCcEEEEcc
Confidence 9999753 33456788999999999999999987 344 44444
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.30 E-value=1.6e-06 Score=63.39 Aligned_cols=72 Identities=24% Similarity=0.267 Sum_probs=57.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
++++|+|+ |.+|+++++.|.+.|++|+++..+++.... +... ....+.+|.++++.|.++ ++++|.||-+.+
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~-~~~~----~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA-YASY----ATHAVIANATEENELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHH-TTTT----CSEEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHH-HHHh----CCcceeeecccchhhhccCCccccEEEEEcC
Confidence 46889988 999999999999999999999988655322 2222 356788999999999887 788999886654
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.29 E-value=2.3e-06 Score=63.13 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=73.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCch--h---hhcc--cCCCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDP--R---HLKL--MGDLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~--~---~~~~--~~~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
|||.|+||+|.+|++++..|+.+| .++.++++++.... . .+.. .....+++....--.+ .+.++++|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d----~~~l~~aD 76 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDEN----LRIIDESD 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTC----GGGGTTCS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcch----HHHhccce
Confidence 689999999999999999999888 58999988753211 0 1111 0001122222111112 24678999
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
+||-+||.... .+..+....|....+.+++.+.+.+ .+.++.+
T Consensus 77 vVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~-~~~iivV 121 (145)
T d1hyea1 77 VVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVI 121 (145)
T ss_dssp EEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred EEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence 99999997543 3446788999999999999999887 4554433
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=98.28 E-value=3.6e-07 Score=68.44 Aligned_cols=114 Identities=14% Similarity=0.060 Sum_probs=74.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCC----CCCeeEEeeCCCChhHHHHHhccccE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGD----LGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
.+++||.|+|+ |.+|+.++..|...+ .++++++.++.........+.. ...-..+.+ .....++++++|+
T Consensus 5 ~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~----~~~~~~~~~~adi 79 (154)
T d1pzga1 5 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA----EYSYEAALTGADC 79 (154)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE----ECSHHHHHTTCSE
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEec----cCchhhhhcCCCe
Confidence 34689999998 999999998888777 4899888776543222111000 000011111 1234567789999
Q ss_pred EEEccccccc-------cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 80 VINLIGREYE-------TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 80 vi~~a~~~~~-------~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|+-++|.... ....+....|......+++.+.+.+ .+-++.+-|
T Consensus 80 Vvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~-p~aiviivs 130 (154)
T d1pzga1 80 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVT 130 (154)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred EEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence 9999987432 1345678889999999999999988 455554443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.11 E-value=4e-06 Score=62.13 Aligned_cols=109 Identities=16% Similarity=0.116 Sum_probs=73.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhccc---CC--CCCeeEEeeCCCChhHHHHHhccccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLM---GD--LGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~---~~--~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
.+||.|+|+ |.+|++++..|+..| .++.+++++++........+ .. ...+.....| . +.++++|+
T Consensus 6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~----~~l~daDv 77 (148)
T d1ldna1 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---Y----DDCRDADL 77 (148)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---G----GGTTTCSE
T ss_pred CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---H----HHhcccee
Confidence 478999997 999999999999887 48999998765432111111 00 1123333333 2 35778999
Q ss_pred EEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 80 VINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 80 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
||.++|.... ....+....|....+.+++.++++++-..++.+|
T Consensus 78 vvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 78 VVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp EEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred EEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 9999987543 3446788889999999999999887322344443
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=98.08 E-value=3.3e-06 Score=62.10 Aligned_cols=106 Identities=13% Similarity=0.139 Sum_probs=69.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCC----CCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD----LGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~----~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+||.|+|+ |.+|+.++-.|+.++ .++.+++++++........+.. .+......+ + .+.++++|+|+
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~----~~~~~~adivv 73 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---D----YSDVKDCDVIV 73 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---c----HHHhCCCceEE
Confidence 58999998 999999999999887 4899999888764322221111 122222222 2 23578899999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
-+||.... ....+....|......+++.+.+.+ .+-++.+
T Consensus 74 itag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~-p~ai~iv 115 (142)
T d1y6ja1 74 VTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILV 115 (142)
T ss_dssp ECCCC------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEE
T ss_pred EecccccCcCcchhHHhhHHHHHHHHHHHHhhccC-CCceEEE
Confidence 99987543 3345678889999999999999987 4444333
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=98.06 E-value=1.4e-06 Score=64.26 Aligned_cols=107 Identities=18% Similarity=0.077 Sum_probs=72.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhcccCC-----CCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|||.|+|+ |.+|++++..|+..| .++.++++++............ ....++...+ +. +.++++|+|
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~----~~~~dadvv 73 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DY----ADTANSDIV 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CH----HHhcCCeEE
Confidence 68999997 999999999999887 5899999887653322111100 0122333222 22 346899999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
+-++|.... ....+....|......+++.+.+.+ .+-++.+
T Consensus 74 vitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~-p~aiviv 116 (142)
T d1guza1 74 IITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHS-KNPIIIV 116 (142)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred EEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccC-CCeEEEE
Confidence 999987532 3345677889999999999999887 4444443
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=98.04 E-value=2.2e-05 Score=57.62 Aligned_cols=95 Identities=15% Similarity=0.169 Sum_probs=56.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC----CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG----SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
|||.|+||||++|+.+++.|+++. .++..++.+.+.... . ... .+.. ...+..+. ..++++|+||.|
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~-~~~--~~~~-~~~~~~~~----~~~~~~DvvF~a 71 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-P-NFG--KDAG-MLHDAFDI----ESLKQLDAVITC 71 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-C-CSS--SCCC-BCEETTCH----HHHTTCSEEEEC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-c-ccC--Ccce-eeecccch----hhhccccEEEEe
Confidence 689999999999999999988643 466665544332111 1 111 0111 11122232 335789999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcc-eEEEEeccC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIM-RFIQISCLG 126 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~-~~v~~Ss~~ 126 (327)
.+. .-+..+...+.+.| .+ .+|=.|+..
T Consensus 72 lp~--------------~~s~~~~~~l~~~g-~~~~VIDlSsdf 100 (147)
T d1mb4a1 72 QGG--------------SYTEKVYPALRQAG-WKGYWIDAASTL 100 (147)
T ss_dssp SCH--------------HHHHHHHHHHHHTT-CCSEEEESSSTT
T ss_pred cCc--------------hHHHHHhHHHHHcC-CceEEEeCCccc
Confidence 854 22456777778887 44 355555544
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.02 E-value=5.7e-06 Score=60.95 Aligned_cols=96 Identities=13% Similarity=0.115 Sum_probs=56.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
.|+|.|+||||++|+.+++.|.+++ .++..+..+.+.. +.+.... ++... -++ + ...+.++|++|.+
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~G-k~i~~~~--~~~~~--~~~---~--~~~~~~~d~vf~a 71 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-QRMGFAE--SSLRV--GDV---D--SFDFSSVGLAFFA 71 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT-CEEEETT--EEEEC--EEG---G--GCCGGGCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCC-cceeecc--ccchh--ccc---h--hhhhccceEEEec
Confidence 4789999999999999999997655 4677665443321 1111110 11111 111 1 1234678999988
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
++. .....+...+.+.| .++|=.|+..-.
T Consensus 72 ~p~--------------~~s~~~~~~~~~~g--~~VID~Ss~fR~ 100 (144)
T d2hjsa1 72 AAA--------------EVSRAHAERARAAG--CSVIDLSGALEP 100 (144)
T ss_dssp SCH--------------HHHHHHHHHHHHTT--CEEEETTCTTTT
T ss_pred CCc--------------chhhhhccccccCC--ceEEeechhhcc
Confidence 753 22345666666777 366766665443
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=97.96 E-value=2.3e-05 Score=57.22 Aligned_cols=108 Identities=15% Similarity=0.049 Sum_probs=71.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCC--chh---hhcc-cCCCCCeeEEeeCCCChhHHHHHhccccE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCED--DPR---HLKL-MGDLGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~--~~~---~~~~-~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
.||.|+||+|.+|++++..|+.++. ++.+++..... ... .+.. ..-....+...+| ++ .++++|+
T Consensus 1 sKV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~----~~~~aDi 73 (142)
T d1o6za1 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YE----DTAGSDV 73 (142)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GG----GGTTCSE
T ss_pred CeEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HH----HhhhcCE
Confidence 3799999999999999999999874 78888764321 111 1111 0101233333333 33 3579999
Q ss_pred EEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcce-EEEEe
Q 047628 80 VINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMR-FIQIS 123 (327)
Q Consensus 80 vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~-~v~~S 123 (327)
|+-+||.... .+..+....|....+.+++.+++.+ .+- ++.+|
T Consensus 74 VvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~-p~~i~ivvt 119 (142)
T d1o6za1 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTS 119 (142)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECC
T ss_pred EEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcC-CCceEEEec
Confidence 9999997543 2346788889999999999999987 443 44443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.91 E-value=2.4e-06 Score=62.71 Aligned_cols=107 Identities=12% Similarity=0.032 Sum_probs=72.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhccc----CCCCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLM----GDLGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~----~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
|||.|+|+ |.+|++++..|+.++ .++.+++++++......... .-........+| . +.++++|+|+
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~----~~~~~adivv 72 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---Y----ADLKGSDVVI 72 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---G----GGGTTCSEEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---H----HHhcCCCEEE
Confidence 68999997 999999999888876 58999998765432111110 001223333322 2 3467999999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
-++|.... ....+....|......+++.+.+.+ .+-++.+-
T Consensus 73 itag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~-p~aivivv 115 (140)
T d1a5za1 73 VAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYA-PDSIVIVV 115 (140)
T ss_dssp ECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred EecccccCCCcchhhhhccccchHHHHHHHHHhcC-CCcEEEEe
Confidence 99987543 2345677889999999999999987 45555443
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.89 E-value=4.4e-05 Score=53.16 Aligned_cols=68 Identities=18% Similarity=0.315 Sum_probs=55.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVI 81 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi 81 (327)
..+||.|+|| |.+|+-++.+..+.|+++++++.++......+. -+++.+|+.|.+.+.+... .+|+|-
T Consensus 10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va-------~~~i~~~~~d~~~l~~~~~~~~~DviT 79 (111)
T d1kjqa2 10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMHVA-------HRSHVINMLDGDALRRVVELEKPHYIV 79 (111)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGS-------SEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcC-------CeEEECCCCCHHHHHHHHHhhCCceEE
Confidence 3578999997 999999999999999999999998776443322 3577899999999988764 469885
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.89 E-value=3.9e-06 Score=62.74 Aligned_cols=104 Identities=10% Similarity=0.001 Sum_probs=65.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-------EEEEeeCCC--CCchhhhc--ccCCCCCeeEEeeCCCChhHHHHHhc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-------QVLVPFRGC--EDDPRHLK--LMGDLGQIVPMKFNPRDDNTIKATMA 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-------~V~~~~R~~--~~~~~~~~--~~~~~~~v~~~~~Dl~~~~~~~~~~~ 75 (327)
.|||.|+||+|++|++++..|...+. ...++.-.. ........ .....+....+... +...+.++
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 79 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEAT----DDPKVAFK 79 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE----SCHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccC----Cchhhhcc
Confidence 47999999999999999999987642 122222111 11110000 01111223333322 23456789
Q ss_pred cccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 76 KANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 76 ~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
++|+||-++|.... .+..+....|....+.+.+.+.+..
T Consensus 80 ~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a 120 (154)
T d1y7ta1 80 DADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVA 120 (154)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999998643 3345788889999999999998864
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=97.88 E-value=5.3e-05 Score=56.18 Aligned_cols=42 Identities=17% Similarity=0.021 Sum_probs=36.6
Q ss_pred cccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 3 YVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 3 ~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
+...+++|+|+||.|.+|+.+++.|.++||+|++.+|+....
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~ 46 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV 46 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccc
Confidence 344567999999999999999999999999999999986553
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.88 E-value=3.4e-05 Score=57.34 Aligned_cols=76 Identities=20% Similarity=0.171 Sum_probs=59.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
-+|+|+|. |.+|..+++.|.+.|++|+++..+++.......... ..++.++.+|.++++.|.++ ++.+|+||-+..
T Consensus 4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~-~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL-GDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH-CTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhh-cCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 47899999 899999999999999999999988754332222211 13589999999999999776 567999997764
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.84 E-value=8.6e-06 Score=61.95 Aligned_cols=113 Identities=6% Similarity=0.006 Sum_probs=71.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-------CEEEEeeCCCCCch-hhhc-cc--CCCCCeeEEeeCCCChhHHHHHhc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-------SQVLVPFRGCEDDP-RHLK-LM--GDLGQIVPMKFNPRDDNTIKATMA 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~-~~~~-~~--~~~~~v~~~~~Dl~~~~~~~~~~~ 75 (327)
..||.|+||+|.||++++-.|++.+ .++++++....... ..+. .. ...+....+.. .....+.++
T Consensus 24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~----~~~~~~~~~ 99 (175)
T d7mdha1 24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI----GIDPYEVFE 99 (175)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE----ESCHHHHTT
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc----cccchhhcc
Confidence 3589999999999999999988743 15555655443211 1000 00 11112222111 123456789
Q ss_pred cccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCc-ceEEEEe
Q 047628 76 KANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGI-MRFIQIS 123 (327)
Q Consensus 76 ~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v-~~~v~~S 123 (327)
++|+||-++|.... .+..+....|....+.+.+++.+..+- .+++.+|
T Consensus 100 ~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 100 DVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp TCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred CCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 99999999988543 345678899999999999999986421 2454454
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.84 E-value=1.9e-06 Score=63.39 Aligned_cols=109 Identities=9% Similarity=-0.016 Sum_probs=72.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhccc----CCCC-CeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLM----GDLG-QIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~----~~~~-~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|||.|+|+ |.+|++++..|+.+| .++.+++++++........+ ...+ ......++ |. +.++++|+|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~--d~----~~~~~adiV 73 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DY----SLLKGSEII 73 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEES--CG----GGGTTCSEE
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCC--CH----HHhccccEE
Confidence 78999997 999999999988877 58999988765432211000 0001 11222221 22 367889999
Q ss_pred EEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 81 INLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 81 i~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
|-.+|.... ....+....|......+.+.+++.+ .+.++.+-|
T Consensus 74 vitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~-p~aivivvt 118 (142)
T d1ojua1 74 VVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENA-PESKILVVT 118 (142)
T ss_dssp EECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECS
T ss_pred EEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhC-CCcEEEEec
Confidence 999986543 3345677889999999999999987 444444443
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.84 E-value=6.4e-06 Score=62.32 Aligned_cols=66 Identities=14% Similarity=0.126 Sum_probs=45.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|||.|+|. |.+|+.+++.|.+.|++|++.+|+++.... ..+.+ .+.. ..| + .++++++|+||-+..
T Consensus 1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~-a~~~~---~~~~-~~~--~----~~~~~~~DiIilavp 66 (165)
T d2f1ka2 1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEK-AVERQ---LVDE-AGQ--D----LSLLQTAKIIFLCTP 66 (165)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTT---SCSE-EES--C----GGGGTTCSEEEECSC
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHH-HHHhh---ccce-eee--e----cccccccccccccCc
Confidence 68999988 999999999999999999999998654332 22211 1111 111 1 135678999997663
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.83 E-value=3.4e-06 Score=65.78 Aligned_cols=37 Identities=30% Similarity=0.478 Sum_probs=34.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
|||.|+||+|.+|++|++.|++.|++|.+.+|++++.
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~ 37 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA 37 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 6899999999999999999999999999999987654
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.82 E-value=8.4e-05 Score=50.04 Aligned_cols=87 Identities=17% Similarity=0.156 Sum_probs=60.4
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh-hhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR-HLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
..++++|+|+|. |-.|..+++.|.+.|++|++.+.+...... .+. .......+.. +. ..+.++|.||-
T Consensus 2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~-----~~~~~~~~~~-~~----~~~~~~d~vi~ 70 (93)
T d2jfga1 2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLP-----EAVERHTGSL-ND----EWLMAADLIVA 70 (93)
T ss_dssp CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSC-----TTSCEEESBC-CH----HHHHHCSEEEE
T ss_pred CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHh-----hccceeeccc-ch----hhhccCCEEEE
Confidence 356789999999 889999999999999999999887654322 221 1344444432 22 23467899998
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCc
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGI 116 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v 116 (327)
..|.... ..+++.|++.| +
T Consensus 71 SPGi~~~--------------~~~~~~a~~~g-i 89 (93)
T d2jfga1 71 SPGIALA--------------HPSLSAAADAG-I 89 (93)
T ss_dssp CTTSCTT--------------SHHHHHHHHTT-C
T ss_pred CCCCCCC--------------CHHHHHHHHcC-C
Confidence 8776432 24777788877 5
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=3.5e-05 Score=58.06 Aligned_cols=72 Identities=21% Similarity=0.174 Sum_probs=48.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCC-eeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQ-IVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~-v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|||+|+|+ |.+|+.++..|.+.|++|+++.|+++.............. ...+..+ ++ +.+.++|+||.+...
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~D~iii~vka 73 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTAN--DP----DFLATSDLLLVTLKA 73 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEES--CH----HHHHTCSEEEECSCG
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCCccccccccccc--hh----hhhcccceEEEeecc
Confidence 79999999 9999999999999999999999988764321111111011 1111221 22 344679999988754
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.80 E-value=5.1e-05 Score=56.52 Aligned_cols=111 Identities=12% Similarity=-0.006 Sum_probs=74.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCCchhhhcccC---CC-CCeeEEeeCCCChhHHHHHhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCEDDPRHLKLMG---DL-GQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~---~~-~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
.+.+||.|+|+ |.+|+.++..|..+|. ++.+++++++........+. .. .....+.. .+.+ .++++|
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~--~d~~----~~~~ad 90 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVAD--KDYS----VTANSK 90 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEEC--SSGG----GGTTCS
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEec--cchh----hccccc
Confidence 34579999997 9999999999999984 89999987654321111110 00 11111111 2222 467899
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcce-EEEEe
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMR-FIQIS 123 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~-~v~~S 123 (327)
+|+.+||.... .+..+....|....+.+++.+++.+ .+- ++.+|
T Consensus 91 iVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~-p~aiiivvt 137 (160)
T d1i0za1 91 IVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYS-PDCIIIVVS 137 (160)
T ss_dssp EEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECS
T ss_pred EEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence 99999997543 3446778889999999999999987 444 44444
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.78 E-value=1e-05 Score=60.66 Aligned_cols=73 Identities=22% Similarity=0.276 Sum_probs=56.1
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++++|||+|+ |-+|+.+++.|...|. ++++..|+.++........+ .+. ...+++.+.+..+|+||.+
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~----~~~-----~~~~~~~~~l~~~Divi~a 91 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG----GEA-----VRFDELVDHLARSDVVVSA 91 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT----CEE-----CCGGGHHHHHHTCSEEEEC
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh----ccc-----ccchhHHHHhccCCEEEEe
Confidence 45789999998 9999999999999996 69999998766544333332 222 2456788888999999999
Q ss_pred cccc
Q 047628 84 IGRE 87 (327)
Q Consensus 84 a~~~ 87 (327)
.+..
T Consensus 92 tss~ 95 (159)
T d1gpja2 92 TAAP 95 (159)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 8753
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.74 E-value=3.1e-05 Score=56.95 Aligned_cols=107 Identities=17% Similarity=0.128 Sum_probs=70.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhhhccc----CCC-CCeeEEeeCCCChhHHHHHhccccEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRHLKLM----GDL-GQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~----~~~-~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
+||.|+|+ |.+|+.++..|+.+| .++++++++..+.......+ ... ........ +.+ .++++|+|
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~---d~~----~l~~adiV 73 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DWA----ALADADVV 73 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CGG----GGTTCSEE
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceecc---CHH----HhccccEE
Confidence 68999996 999999999999877 58999988765432111100 000 12233232 333 46789999
Q ss_pred EEccccccc------cCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYE------TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
|-+||.... ....+....|....+.+++.+++.+ .+-++.+-
T Consensus 74 VitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~-p~aivivv 121 (146)
T d1hyha1 74 ISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVI 121 (146)
T ss_dssp EECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEEC
T ss_pred EEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEe
Confidence 999986432 1234567789999999999999987 44444443
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.73 E-value=9e-06 Score=59.71 Aligned_cols=108 Identities=12% Similarity=0.036 Sum_probs=68.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCC-----CCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDL-----GQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~-----~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
+||.|+|+ |.+|+.++-.|..++ .++.+++.+++............ ....+... .+.+ .++++|+||
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~----~~~~advvv 74 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA----DTANSDVIV 74 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----GGTTCSEEE
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHH----HhcCCCEEE
Confidence 68999997 999999999888776 48999988776532211111000 01122211 1222 357899999
Q ss_pred Ecccccc--ccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 82 NLIGREY--ETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 82 ~~a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
-+||... .....+....|......+++.+.+.+ .+-++.+-
T Consensus 75 itag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~-p~aivivv 117 (142)
T d1uxja1 75 VTSGAPRKPGMSREDLIKVNADITRACISQAAPLS-PNAVIIMV 117 (142)
T ss_dssp ECCSCC---------CHHHHHHHHHHHHHHHGGGC-TTCEEEEC
T ss_pred EeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccC-CCceEEEe
Confidence 9998753 23445677889999999999999987 45555443
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=97.72 E-value=6.1e-05 Score=55.03 Aligned_cols=106 Identities=11% Similarity=0.066 Sum_probs=72.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhh---hcccCC-CCCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRH---LKLMGD-LGQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~---~~~~~~-~~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
.||.|+|+ |.+|++++..|+.+| .++.++++++...... +..-.. .+.......+ +. +.++++|+||
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~--~~----~~~~daDvVV 74 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSD--DP----EICRDADMVV 74 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEES--CG----GGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCC--CH----HHhhCCcEEE
Confidence 58999997 999999999999887 4899999876543211 111000 0122222222 22 2467899999
Q ss_pred Eccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcceEEE
Q 047628 82 NLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121 (327)
Q Consensus 82 ~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~ 121 (327)
-++|.... ....+....|....+.+++.+++.+ .+.++.
T Consensus 75 itaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~-p~ai~i 115 (143)
T d1llda1 75 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVA-PNAIYM 115 (143)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-TTSEEE
T ss_pred EecccccCCCCchhhhhhhhHHHHHHHHHHHHhhC-CCeEEE
Confidence 99997543 3446788889999999999999987 444433
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.72 E-value=9.1e-05 Score=57.72 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=31.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
|||.|+|. |++|..++..|++.|++|++++.+.+
T Consensus 1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~ 34 (202)
T d1mv8a2 1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSST 34 (202)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHH
Confidence 78999977 99999999999999999999987654
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.70 E-value=0.00015 Score=53.34 Aligned_cols=109 Identities=16% Similarity=0.094 Sum_probs=71.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCC-----CCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGD-----LGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~-----~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
++||.|+|+ |.+|++++..|..++ .++.+++++++........+.. ..+......+ +. +.++++|+|
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~----~~~~~advv 75 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TY----DDLAGADVV 75 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CG----GGGTTCSEE
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cc----cccCCCcEE
Confidence 468999996 999999998777776 4888999877653222111100 0122222222 22 356789999
Q ss_pred EEcccccccc-------CcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 81 INLIGREYET-------RNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 81 i~~a~~~~~~-------~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
+-+++..... ...+....|....+.+++.+++.+ .+-++.+-
T Consensus 76 vitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aivivv 124 (150)
T d1t2da1 76 IVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV 124 (150)
T ss_dssp EECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred EEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEEEEe
Confidence 9999864321 245678889999999999999988 45544443
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.70 E-value=3.3e-05 Score=59.18 Aligned_cols=77 Identities=17% Similarity=0.112 Sum_probs=50.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC----CCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG----DLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~----~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
+++|.|+|+ |.+|..++..|.++|++|++++|+++.... ....+ ..+.............++.++++++|+||-
T Consensus 1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii 78 (184)
T d1bg6a2 1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKE-IQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 78 (184)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEE
Confidence 479999999 999999999999999999999998654322 11110 001111111111112346778899999998
Q ss_pred ccc
Q 047628 83 LIG 85 (327)
Q Consensus 83 ~a~ 85 (327)
+..
T Consensus 79 ~v~ 81 (184)
T d1bg6a2 79 VVP 81 (184)
T ss_dssp CSC
T ss_pred EEc
Confidence 764
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.69 E-value=5.3e-05 Score=54.25 Aligned_cols=74 Identities=11% Similarity=0.240 Sum_probs=52.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
|||.|.|++|..|+.+.+.+.++|+++.+..-. ... +.+.++|+||++..+
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~------------------------~~~----~~~~~~DVvIDFS~p- 51 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDV------------------------NGV----EELDSPDVVIDFSSP- 51 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEET------------------------TEE----EECSCCSEEEECSCG-
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECC------------------------CcH----HHhccCCEEEEecCH-
Confidence 689999999999999999888899887654210 000 113468999998754
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+++...++.|.+++ + .+| ++|++
T Consensus 52 -------------~~~~~~l~~~~~~~-~-p~V-iGTTG 74 (128)
T d1vm6a3 52 -------------EALPKTVDLCKKYR-A-GLV-LGTTA 74 (128)
T ss_dssp -------------GGHHHHHHHHHHHT-C-EEE-ECCCS
T ss_pred -------------HHHHHHHHHHHhcC-C-CEE-EEcCC
Confidence 34578899999998 5 455 44444
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.69 E-value=0.00017 Score=50.40 Aligned_cols=88 Identities=10% Similarity=0.059 Sum_probs=62.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++|||+|+ |.+|..-++.|++.|.+|++++...+.....+.. ..+++++..++.+. -+.+++.|+-+.
T Consensus 10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~---~~~i~~~~~~~~~~-----dl~~~~lv~~at 80 (113)
T d1pjqa1 10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN---EGMLTLVEGPFDET-----LLDSCWLAIAAT 80 (113)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT---TTSCEEEESSCCGG-----GGTTCSEEEECC
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh---cCCceeeccCCCHH-----HhCCCcEEeecC
Confidence 45789999999 9999999999999999999998766543332222 23577776665432 256788888665
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHG 114 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~ 114 (327)
+.. .....+.+.|++.|
T Consensus 81 ~d~-------------~~n~~i~~~a~~~~ 97 (113)
T d1pjqa1 81 DDD-------------TVNQRVSDAAESRR 97 (113)
T ss_dssp SCH-------------HHHHHHHHHHHHTT
T ss_pred CCH-------------HHHHHHHHHHHHcC
Confidence 421 22346788888887
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.69 E-value=9.3e-05 Score=56.47 Aligned_cols=101 Identities=11% Similarity=0.137 Sum_probs=57.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEee-CCCCC-chhhh----cccCCCCCeeEEeeCCCChhHHHHHhccccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPF-RGCED-DPRHL----KLMGDLGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~-R~~~~-~~~~~----~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
|++|.|+||||++|+.|++.|.++ .+++..+. +..+. ..+.+ .............. +.......++|+
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dv 75 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPM-----SDVRDFSADVDV 75 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEE-----SCGGGTCTTCCE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccc-----hhhhhhhcccce
Confidence 589999999999999999999997 46766553 22211 11111 11111111111111 112223467899
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
+|.+.+.. ....+.....+.+ .++|=.|+..-.
T Consensus 76 vf~alp~~--------------~s~~~~~~~~~~~--~~vIDlSadfRl 108 (179)
T d2g17a1 76 VFLATAHE--------------VSHDLAPQFLQAG--CVVFDLSGAFRV 108 (179)
T ss_dssp EEECSCHH--------------HHHHHHHHHHHTT--CEEEECSSTTSS
T ss_pred eeccccch--------------hHHHHhhhhhhcC--ceeecccccccc
Confidence 99887542 2234556666666 367767765443
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.69 E-value=5.7e-05 Score=56.19 Aligned_cols=111 Identities=15% Similarity=0.050 Sum_probs=73.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCCCchhh---hcccC-CCCCeeEEeeCCCChhHHHHHhcccc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCEDDPRH---LKLMG-DLGQIVPMKFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~---~~~~~-~~~~v~~~~~Dl~~~~~~~~~~~~~d 78 (327)
++..||.|+|+ |.+|++++..|...| .++.+++++.+..... +.... ..+.-..+..+ +. +.+.++|
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~--d~----~~~~~ad 89 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGK--DY----NVSANSK 89 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEES--SG----GGGTTEE
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEecc--ch----hhhcccc
Confidence 44568999997 999999999999887 4899998876543211 11100 01111222221 22 3457899
Q ss_pred EEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHcCCcce-EEEEe
Q 047628 79 VVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEHGGIMR-FIQIS 123 (327)
Q Consensus 79 ~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~v~~-~v~~S 123 (327)
+||-++|.... .+..+..+.|....+.+++.+++.+ .+- ++.+|
T Consensus 90 ivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~-p~~ivivvt 136 (159)
T d2ldxa1 90 LVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNS-PDCKIIVVT 136 (159)
T ss_dssp EEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHS-TTCEEEECS
T ss_pred EEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccC-CCeEEEEeC
Confidence 99999987543 3456778889999999999988887 443 34343
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.65 E-value=5e-05 Score=57.74 Aligned_cols=96 Identities=20% Similarity=0.246 Sum_probs=62.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHH---HHh--ccccEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK---ATM--AKANVV 80 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~---~~~--~~~d~v 80 (327)
+..+|||+||+|-+|...++.+...|.+|+++++++++ ....++.+ ... ..|.++++..+ +.. +++|+|
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~-~~~~~~~G----a~~-vi~~~~~~~~~~i~~~t~~~g~d~v 101 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG-QKIVLQNG----AHE-VFNHREVNYIDKIKKYVGEKGIDII 101 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTT----CSE-EEETTSTTHHHHHHHHHCTTCEEEE
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccc-cccccccC----ccc-ccccccccHHHHhhhhhccCCceEE
Confidence 35689999999999999999988899999999987654 33344444 221 13555543333 333 248999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+++.|.. .....++.++..| +++.++.
T Consensus 102 ~d~~g~~--------------~~~~~~~~l~~~G---~iv~~G~ 128 (174)
T d1yb5a2 102 IEMLANV--------------NLSKDLSLLSHGG---RVIVVGS 128 (174)
T ss_dssp EESCHHH--------------HHHHHHHHEEEEE---EEEECCC
T ss_pred eecccHH--------------HHHHHHhccCCCC---EEEEEec
Confidence 9998631 1233455555554 7787754
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=97.62 E-value=2.3e-05 Score=58.71 Aligned_cols=96 Identities=17% Similarity=0.230 Sum_probs=58.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC-CCEEEEe-eCCCCCch-hhhcccCCC--CCeeEEeeCCCChhHHHHHhccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM-GSQVLVP-FRGCEDDP-RHLKLMGDL--GQIVPMKFNPRDDNTIKATMAKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~~~-~~~~~~~~~--~~v~~~~~Dl~~~~~~~~~~~~~d~vi 81 (327)
++||+|.|++|.+|+.+++.+++. +.++.+. .|..+... ..+...... ..+. +. +++...++.+|+||
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~-~~------~~~~~~~~~~DViI 76 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVT-VQ------SSLDAVKDDFDVFI 76 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCC-EE------SCSTTTTTSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCce-ee------ccHHHHhcccceEE
Confidence 579999999999999999999876 5675544 44332211 111110000 0111 12 22334567899999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.+..+ +++...+++|.+.+ + .+| ++|++
T Consensus 77 DFs~p--------------~~~~~~~~~a~~~~-~-~~V-iGTTG 104 (162)
T d1diha1 77 DFTRP--------------EGTLNHLAFCRQHG-K-GMV-IGTTG 104 (162)
T ss_dssp ECSCH--------------HHHHHHHHHHHHTT-C-EEE-ECCCC
T ss_pred EeccH--------------HHHHHHHHHHHhcc-c-eeE-EecCC
Confidence 98654 55678899999998 5 455 34434
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.61 E-value=1.4e-05 Score=59.58 Aligned_cols=103 Identities=8% Similarity=-0.062 Sum_probs=65.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-------CEEEEeeCCCCCch-hhhc---ccCCCCCeeEEeeCCCChhHHHHHhc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-------SQVLVPFRGCEDDP-RHLK---LMGDLGQIVPMKFNPRDDNTIKATMA 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-------~~V~~~~R~~~~~~-~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~ 75 (327)
.|||.|+||+|.+|++++..|+..+ .+++.++.+..... ..+. .....+....+.. .....+.++
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~ 78 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA----TDKEEIAFK 78 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE----ESCHHHHTT
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccccccccccccc----CcccccccC
Confidence 4799999999999999999988653 13455544332211 0000 0011112222221 112356788
Q ss_pred cccEEEEccccccc--cCcchhHhhhhHHHHHHHHHHHHc
Q 047628 76 KANVVINLIGREYE--TRNYSFEDVNHFMAERIAGIAKEH 113 (327)
Q Consensus 76 ~~d~vi~~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~ 113 (327)
++|+||-++|.... .+..+....|....+.+.+.+.+.
T Consensus 79 ~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~ 118 (154)
T d5mdha1 79 DLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKY 118 (154)
T ss_dssp TCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhh
Confidence 99999999987543 345678899999999999988775
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.51 E-value=4.5e-05 Score=57.79 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRG 40 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~ 40 (327)
|+||.|+||||++|+.|++.|.++. .++..+..+
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~ 35 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR 35 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence 5799999999999999999998865 566666433
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=0.00022 Score=56.20 Aligned_cols=75 Identities=11% Similarity=0.075 Sum_probs=53.7
Q ss_pred ccCCcEEEEEcC----------------CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh
Q 047628 4 VYSGIIATVFGT----------------TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD 67 (327)
Q Consensus 4 ~~~~~~ilI~Ga----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~ 67 (327)
++..++||||+| ||..|.+|++++..+|++|+++.-..+...+ +.+..+.. ...
T Consensus 3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p--------~~~~~~~~--~t~ 72 (223)
T d1u7za_ 3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTP--------PFVKRVDV--MTA 72 (223)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCC--------TTEEEEEC--CSH
T ss_pred ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcc--------ccccccee--hhh
Confidence 356789999865 8999999999999999999999876553221 13444433 233
Q ss_pred hHH----HHHhccccEEEEcccccc
Q 047628 68 NTI----KATMAKANVVINLIGREY 88 (327)
Q Consensus 68 ~~~----~~~~~~~d~vi~~a~~~~ 88 (327)
+++ .+.+.++|++|++|+...
T Consensus 73 ~~m~~~~~~~~~~~D~~i~aAAvsD 97 (223)
T d1u7za_ 73 LEMEAAVNASVQQQNIFIGCAAVAD 97 (223)
T ss_dssp HHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred HHHHHHHHhhhccceeEeeeechhh
Confidence 333 344567999999998753
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.49 E-value=5.6e-05 Score=57.89 Aligned_cols=99 Identities=20% Similarity=0.222 Sum_probs=64.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hHHHHHh--ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NTIKATM--AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~--~~~d~vi 81 (327)
..+|||+||+|-+|...++.+...|.+|+++++++++ ...+++.+ ... ..|..++ +.+.+.. +++|+||
T Consensus 26 g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~-~~~l~~~G----a~~-vi~~~~~~~~~~v~~~t~~~g~d~v~ 99 (183)
T d1pqwa_ 26 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK-REMLSRLG----VEY-VGDSRSVDFADEILELTDGYGVDVVL 99 (183)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHH-HHHHHTTC----CSE-EEETTCSTHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEECCCCCcccccchhhccccccceeeeccccc-cccccccc----ccc-cccCCccCHHHHHHHHhCCCCEEEEE
Confidence 4789999999999999999888889999999987655 33444443 222 1244443 3344433 3589999
Q ss_pred EccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 82 NLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 82 ~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
++.|.. .....++.++..| ++|.++.....
T Consensus 100 d~~g~~--------------~~~~~~~~l~~~G---~~v~~G~~~~~ 129 (183)
T d1pqwa_ 100 NSLAGE--------------AIQRGVQILAPGG---RFIELGKKDVY 129 (183)
T ss_dssp ECCCTH--------------HHHHHHHTEEEEE---EEEECSCGGGT
T ss_pred ecccch--------------HHHHHHHHhcCCC---EEEEEccCCCC
Confidence 998731 1233455555544 78877654433
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.49 E-value=0.00014 Score=55.64 Aligned_cols=82 Identities=17% Similarity=0.091 Sum_probs=61.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhc---ccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLK---LMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~---~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
.+.++|+|+|+ |..|+.++..|.+.|. +++++.|+++...+... ..+..-.......|+.+.+.+...+.++|.|
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 45689999999 6779999999999885 79999999876543221 1111112345577888999999999999999
Q ss_pred EEccccc
Q 047628 81 INLIGRE 87 (327)
Q Consensus 81 i~~a~~~ 87 (327)
|++.+..
T Consensus 95 IN~Tp~G 101 (182)
T d1vi2a1 95 TNGTKVG 101 (182)
T ss_dssp EECSSTT
T ss_pred ccccCCc
Confidence 9998653
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.48 E-value=2.8e-05 Score=59.64 Aligned_cols=34 Identities=24% Similarity=0.324 Sum_probs=28.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEee
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPF 38 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~ 38 (327)
.++.||.|+||||++|+.+++.|.++. .++..+.
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~ 37 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMT 37 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEe
Confidence 456899999999999999999998875 5666664
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.48 E-value=0.00037 Score=52.01 Aligned_cols=67 Identities=19% Similarity=0.159 Sum_probs=48.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
|++|.++|- |.+|+.+++.|+++||+|++.+|++++... +...+ .. . ..+..+++..+|+|+-|...
T Consensus 1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~-~~~~~----~~--~-----~~~~~e~~~~~diii~~v~~ 67 (162)
T d3cuma2 1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDG-LVAAG----AS--A-----ARSARDAVQGADVVISMLPA 67 (162)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHH-HHHTT----CE--E-----CSSHHHHHTSCSEEEECCSC
T ss_pred CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhh-hhhhh----cc--c-----cchhhhhccccCeeeecccc
Confidence 468999987 999999999999999999999998665332 22211 11 1 12345667788988887753
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.41 E-value=0.00011 Score=54.35 Aligned_cols=65 Identities=15% Similarity=0.205 Sum_probs=47.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|||.|+|. |.+|+.+++.|+++|++|++..|.+++....... ..... ++..++++++|.||-|..
T Consensus 1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-----~~~~~-------~~~~e~~~~~diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-----TVGVT-------ETSEEDVYSCPVVISAVT 65 (152)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-----HHTCE-------ECCHHHHHTSSEEEECSC
T ss_pred CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-----ccccc-------ccHHHHHhhcCeEEEEec
Confidence 68999977 9999999999999999999998877654332221 11111 123456788999998875
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.40 E-value=0.00012 Score=55.33 Aligned_cols=73 Identities=21% Similarity=0.149 Sum_probs=51.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
..+|||+||+|-+|...++.+...|.+|+++++++++. +..++.+ ...+ .|..+.........++|+||++.|
T Consensus 28 g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~-~~~~~lG----a~~~-i~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 28 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-ALPLALG----AEEA-ATYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-HHHHHTT----CSEE-EEGGGHHHHHHHTTSEEEEEECSC
T ss_pred CCEEEEEeccccchhhhhhhhccccccccccccccccc-ccccccc----ccee-eehhhhhhhhhccccccccccccc
Confidence 57899999999999999999889999999999887653 3334444 2211 233333222333467999999876
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.40 E-value=0.00014 Score=55.55 Aligned_cols=78 Identities=17% Similarity=0.054 Sum_probs=52.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh--ccccEEEEc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM--AKANVVINL 83 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--~~~d~vi~~ 83 (327)
+..+|||+||+|-+|...++.....|.+|++++|++++ ...++..+ ....+..-|-...+.+.+.. +++|+||++
T Consensus 29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~-~~~~~~~G--a~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~ 105 (182)
T d1v3va2 29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEK-IAYLKQIG--FDAAFNYKTVNSLEEALKKASPDGYDCYFDN 105 (182)
T ss_dssp SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHTT--CSEEEETTSCSCHHHHHHHHCTTCEEEEEES
T ss_pred CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHH-HHHHHhhh--hhhhcccccccHHHHHHHHhhcCCCceeEEe
Confidence 35789999999999999999988999999999988665 33344443 11222222222333333333 358999999
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
.|.
T Consensus 106 vG~ 108 (182)
T d1v3va2 106 VGG 108 (182)
T ss_dssp SCH
T ss_pred cCc
Confidence 873
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.39 E-value=1.6e-05 Score=61.64 Aligned_cols=108 Identities=14% Similarity=0.039 Sum_probs=65.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc----------cCCCCC-------eeEEeeCCCCh
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL----------MGDLGQ-------IVPMKFNPRDD 67 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~----------~~~~~~-------v~~~~~Dl~~~ 67 (327)
|+-++|.|+|+ |.+|+.++..++..|++|++++++++........ .+.... ......-+.-.
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 80 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 80 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcccc
Confidence 44579999999 9999999999999999999999987643221110 000000 00000001112
Q ss_pred hHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 68 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
.++.+++.++|.|+-++.- |++.-+.+.+...+.- -+..|+.|+.+
T Consensus 81 ~d~~~a~~~ad~ViEav~E------------~l~~K~~v~~~l~~~~-~~~~ilasnTS 126 (192)
T d1f0ya2 81 TDAASVVHSTDLVVEAIVE------------NLKVKNELFKRLDKFA-AEHTIFASNTS 126 (192)
T ss_dssp SCHHHHTTSCSEEEECCCS------------CHHHHHHHHHHHTTTS-CTTCEEEECCS
T ss_pred chhHhhhcccceehhhccc------------chhHHHHHHHHHhhhc-ccCceeeccCc
Confidence 2456678889999988743 3445566776666543 23455566544
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.37 E-value=0.00016 Score=55.16 Aligned_cols=77 Identities=13% Similarity=0.164 Sum_probs=51.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc-hhhhcccCCCC--CeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD-PRHLKLMGDLG--QIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~-~~~~~~~~~~~--~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
|+|.|+|+ |-.|..++..|.+.|++|++..|..+.. ...+......+ .......++.-.+++.++++++|+||.+.
T Consensus 1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av 79 (180)
T d1txga2 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (180)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence 78999999 9999999999999999999999854321 11111100000 01111122233567888999999999876
Q ss_pred c
Q 047628 85 G 85 (327)
Q Consensus 85 ~ 85 (327)
.
T Consensus 80 p 80 (180)
T d1txga2 80 S 80 (180)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.29 E-value=7.7e-05 Score=55.30 Aligned_cols=66 Identities=11% Similarity=0.174 Sum_probs=48.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|||.++|+ |.+|+++++.|++.|+++++..|+.++.....+..+ +... .+..++++++|+||-+.-
T Consensus 1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g----~~~~-------~~~~~~~~~~dvIilavk 66 (152)
T d2ahra2 1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA----LPYA-------MSHQDLIDQVDLVILGIK 66 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT----CCBC-------SSHHHHHHTCSEEEECSC
T ss_pred CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc----eeee-------chhhhhhhccceeeeecc
Confidence 68999988 999999999999999999999998765433222222 2221 234556678999997763
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.28 E-value=8.1e-05 Score=55.76 Aligned_cols=65 Identities=23% Similarity=0.347 Sum_probs=48.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|||.|+|- |.+|+.+++.|+++||+|++.+|++++... +...+ ... .++..++++++|+||-|..
T Consensus 1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~-~~~~~----~~~-------~~~~~e~~~~~d~ii~~v~ 65 (161)
T d1vpda2 1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIAD-VIAAG----AET-------ASTAKAIAEQCDVIITMLP 65 (161)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHTT----CEE-------CSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHH-HHHhh----hhh-------cccHHHHHhCCCeEEEEcC
Confidence 68999988 999999999999999999999998765332 22221 221 1234566778999998874
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=97.24 E-value=0.00019 Score=54.15 Aligned_cols=36 Identities=19% Similarity=0.220 Sum_probs=30.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC--EEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS--QVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~ 43 (327)
|++|+|+|. |.+|..+++.|.+.|+ +|++.+|+++.
T Consensus 1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~ 38 (171)
T d2g5ca2 1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPES 38 (171)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHH
T ss_pred CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHH
Confidence 357999987 9999999999999985 78888887655
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.22 E-value=0.00051 Score=49.08 Aligned_cols=70 Identities=14% Similarity=0.065 Sum_probs=53.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH-hccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT-MAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~-~~~~d~vi~~a~ 85 (327)
++++|.|. |.+|+.+++.|. +++|.++..+++... .+.. .++.++.+|.++++.|.++ ++.++.++-+..
T Consensus 1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~-~~~~----~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~ 71 (129)
T d2fy8a1 1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRK-KVLR----SGANFVHGDPTRVSDLEKANVRGARAVIVNLE 71 (129)
T ss_dssp CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHH-HHHH----TTCEEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHH-HHHh----cCccccccccCCHHHHHHhhhhcCcEEEEecc
Confidence 46889987 888999999984 567888887766532 2222 3588999999999999875 467899987653
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.20 E-value=3.9e-05 Score=59.14 Aligned_cols=78 Identities=19% Similarity=0.146 Sum_probs=50.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC-C---CCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG-D---LGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~---~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
|.|+||.|+|+ |--|.+++..|.+.|++|++..|+++... .+.... + .+++.. .-++.-..++.++++++|+|
T Consensus 5 ~~m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~-~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~~ad~i 81 (189)
T d1n1ea2 5 LYLNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVR-LVNEKRENVLFLKGVQL-ASNITFTSDVEKAYNGAEII 81 (189)
T ss_dssp CCEEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHH-HHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHTTCSCE
T ss_pred ceeceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHH-HHhhccccccccccccc-ccccccchhhhhccCCCCEE
Confidence 44568999999 88899999999999999999999764321 111100 0 011111 11111123577888999999
Q ss_pred EEccc
Q 047628 81 INLIG 85 (327)
Q Consensus 81 i~~a~ 85 (327)
|.+.+
T Consensus 82 iiavP 86 (189)
T d1n1ea2 82 LFVIP 86 (189)
T ss_dssp EECSC
T ss_pred EEcCc
Confidence 98764
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.16 E-value=0.00014 Score=53.88 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=52.6
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+|.|+||||++|..|++.|.++++ ++..+..+.+. ...+.... -.....+..+ ..+.++|.++.+++
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~-G~~~~~~~----~~~~~~~~~~-----~~~~~~d~~f~~~~ 72 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSA-GKSLKFKD----QDITIEETTE-----TAFEGVDIALFSAG 72 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGT-TCEEEETT----EEEEEEECCT-----TTTTTCSEEEECSC
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccc-cccccccC----Ccccccccch-----hhhhhhhhhhhccC
Confidence 799999999999999999888854 34444322111 11111110 1111112211 23456899888876
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
.. .+..++..+...+ .++|=.|+..-.
T Consensus 73 ~~--------------~s~~~~~~~~~~~--~~VIDlSsdfR~ 99 (154)
T d2gz1a1 73 SS--------------TSAKYAPYAVKAG--VVVVDNTSYFRQ 99 (154)
T ss_dssp HH--------------HHHHHHHHHHHTT--CEEEECSSTTTT
T ss_pred cc--------------chhhHHhhhcccc--ceehhcChhhhc
Confidence 42 2344555555666 467767765443
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=97.15 E-value=0.00076 Score=44.53 Aligned_cols=86 Identities=13% Similarity=0.032 Sum_probs=58.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
.|||-++|-.|-==+.|++.|+++|++|.+-++..+.....++..+ +.+..+. +++. ++++|.||...+.
T Consensus 1 ~~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~G----i~i~~gh--~~~~----i~~~d~vV~SsAI 70 (89)
T d1j6ua1 1 HMKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLG----IPIFVPH--SADN----WYDPDLVIKTPAV 70 (89)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTT----CCEESSC--CTTS----CCCCSEEEECTTC
T ss_pred CcEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCC----CeEEeee--cccc----cCCCCEEEEecCc
Confidence 3789999885544457899999999999999998766556666654 5554432 3333 3578999988876
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHcCCcc
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEHGGIM 117 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~ 117 (327)
..+. .-+.+|++.| ++
T Consensus 71 ~~~n--------------pel~~A~~~g-Ip 86 (89)
T d1j6ua1 71 RDDN--------------PEIVRARMER-VP 86 (89)
T ss_dssp CTTC--------------HHHHHHHHTT-CC
T ss_pred CCCC--------------HHHHHHHHcC-CC
Confidence 4321 2466677776 53
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.12 E-value=0.00027 Score=53.30 Aligned_cols=75 Identities=19% Similarity=0.228 Sum_probs=50.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
.+.++|+|+|+ |-.+++++..|.+.|.+|+++.|+.++.............++.+ ++.+. ....+|.||++.
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~--~~~~~-----~~~~~dliIN~T 87 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQAL--SMDEL-----EGHEFDLIINAT 87 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEEC--CSGGG-----TTCCCSEEEECC
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccc--ccccc-----cccccceeeccc
Confidence 45689999999 66799999999999999999999987654333322211223322 22111 124689999998
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+..
T Consensus 88 p~G 90 (170)
T d1nyta1 88 SSG 90 (170)
T ss_dssp SCG
T ss_pred ccC
Confidence 654
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.04 E-value=0.0017 Score=48.90 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=53.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.+|.++|- |.+|+.+++.|+++||+|++.+|++++.............. .+ ....+++.+.+..+|.++-+..
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~---~~-a~~~~~~~~~~~~~~~ii~~~~ 75 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKV---LG-AHSLEEMVSKLKKPRRIILLVK 75 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSC---EE-CSSHHHHHHHBCSSCEEEECSC
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccc---cc-hhhhhhhhhhhcccceEEEecC
Confidence 57999998 99999999999999999999999987744332211100001 11 2366788888889999988764
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.02 E-value=0.00087 Score=50.27 Aligned_cols=98 Identities=20% Similarity=0.273 Sum_probs=62.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCC--CChhHHHHHh-----ccccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP--RDDNTIKATM-----AKANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl--~~~~~~~~~~-----~~~d~ 79 (327)
..+|+|+| +|-+|...+..+...|.+|+++++++++. +..+..+ .... +..|- .+.+.+.+.+ .++|+
T Consensus 27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-~~a~~~g--a~~~-~~~~~~~~~~~~~~~~~~~~~g~g~D~ 101 (170)
T d1e3ja2 27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKNCG--ADVT-LVVDPAKEEESSIIERIRSAIGDLPNV 101 (170)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTT--CSEE-EECCTTTSCHHHHHHHHHHHSSSCCSE
T ss_pred CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHH-HHHHHcC--CcEE-EeccccccccchhhhhhhcccccCCce
Confidence 46899998 58899999998888999999999987663 2233333 1122 22222 2334444433 24899
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
||.|+|.. ......++.++..| +++.++..
T Consensus 102 vid~~g~~-------------~~~~~a~~~~~~~G---~iv~~G~~ 131 (170)
T d1e3ja2 102 TIDCSGNE-------------KCITIGINITRTGG---TLMLVGMG 131 (170)
T ss_dssp EEECSCCH-------------HHHHHHHHHSCTTC---EEEECSCC
T ss_pred eeecCCCh-------------HHHHHHHHHHhcCC---ceEEEecC
Confidence 99998753 12234556666665 77777643
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.02 E-value=0.00037 Score=52.71 Aligned_cols=100 Identities=17% Similarity=0.178 Sum_probs=62.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh-hHHHHHh--ccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD-NTIKATM--AKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~-~~~~~~~--~~~d~vi~~ 83 (327)
..+|||+||+|-+|...++.+...|.+|++.++++++ ....+..+. . ..+ |..+. ++..+.. +++|+||++
T Consensus 32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k-~~~~~~lGa--~-~vi--~~~~~~~~~~~~~~~~gvD~vid~ 105 (176)
T d1xa0a2 32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAE-HDYLRVLGA--K-EVL--AREDVMAERIRPLDKQRWAAAVDP 105 (176)
T ss_dssp GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTC-HHHHHHTTC--S-EEE--ECC---------CCSCCEEEEEEC
T ss_pred CCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHH-HHHHHhccc--c-eee--ecchhHHHHHHHhhccCcCEEEEc
Confidence 4679999999999999999888899999999998887 344444441 1 122 22221 2222223 358999999
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCC
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASS 129 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~ 129 (327)
.|-.. ....++.++..| |++.++..+-.+
T Consensus 106 vgg~~--------------~~~~l~~l~~~G---riv~~G~~~g~~ 134 (176)
T d1xa0a2 106 VGGRT--------------LATVLSRMRYGG---AVAVSGLTGGAE 134 (176)
T ss_dssp STTTT--------------HHHHHHTEEEEE---EEEECSCCSSSC
T ss_pred CCchh--------------HHHHHHHhCCCc---eEEEeecccCcc
Confidence 87421 123444444544 888877765443
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.98 E-value=0.00032 Score=44.92 Aligned_cols=38 Identities=26% Similarity=0.213 Sum_probs=34.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
...+|||+||+|-+|...++.+...|.+|+++++++++
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k 68 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGREST 68 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGG
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHH
Confidence 45789999999999999999888899999999998765
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.97 E-value=0.00065 Score=50.93 Aligned_cols=74 Identities=14% Similarity=0.132 Sum_probs=51.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCC-ChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR-DDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~-~~~~~~~~~~~~d~vi~~a~ 85 (327)
..+|+|+|+ |-+|...++.+...|.+|+++++++++. +..++.+. . +++ |.. +.+......+++|+++.|.+
T Consensus 28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~-~~a~~lGa--~-~~i--~~~~~~~~~~~~~~~~d~vi~~~~ 100 (168)
T d1piwa2 28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR-EDAMKMGA--D-HYI--ATLEEGDWGEKYFDTFDLIVVCAS 100 (168)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH-HHHHHHTC--S-EEE--EGGGTSCHHHHSCSCEEEEEECCS
T ss_pred CCEEEEECC-CCcchhHHHHhhhccccccccccchhHH-HHhhccCC--c-EEe--eccchHHHHHhhhcccceEEEEec
Confidence 578999997 8999998888778899999999988764 33444441 1 222 222 23334445566899999976
Q ss_pred cc
Q 047628 86 RE 87 (327)
Q Consensus 86 ~~ 87 (327)
..
T Consensus 101 ~~ 102 (168)
T d1piwa2 101 SL 102 (168)
T ss_dssp CS
T ss_pred CC
Confidence 53
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.97 E-value=0.003 Score=45.14 Aligned_cols=78 Identities=17% Similarity=0.218 Sum_probs=51.7
Q ss_pred EEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccccc
Q 047628 9 IATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGRE 87 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~~ 87 (327)
||.|.|++|..|+.+++.+.+. ++++.+..-..+. .+.+ ...++|+||.+..+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-----------------------~~~~--~~~~~DvvIDFS~p- 54 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-----------------------LSLL--TDGNTEVVIDFTHP- 54 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-----------------------THHH--HTTTCSEEEECCCT-
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-----------------------hhhh--ccccCCEEEEcccH-
Confidence 6999999999999999988765 5776654311110 1111 12468999999754
Q ss_pred cccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 88 YETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 88 ~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
+.+...++.|.+.| + .+| ++|++-.
T Consensus 55 -------------~~~~~~~~~~~~~~-~-~~V-iGTTG~~ 79 (135)
T d1yl7a1 55 -------------DVVMGNLEFLIDNG-I-HAV-VGTTGFT 79 (135)
T ss_dssp -------------TTHHHHHHHHHHTT-C-EEE-ECCCCCC
T ss_pred -------------HHHHHHHHHHHhcC-C-CEE-Eeccccc
Confidence 34567889999998 5 444 4544443
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.97 E-value=0.00062 Score=51.79 Aligned_cols=97 Identities=13% Similarity=0.177 Sum_probs=59.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHH----Hh--ccccE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKA----TM--AKANV 79 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~----~~--~~~d~ 79 (327)
..+|||+|+ |-+|...+..+...|. +|+++++++++. +..++.+. . ..+...-.+..+..+ .. .++|+
T Consensus 29 G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a~~lGa--~-~vi~~~~~~~~~~~~~i~~~~~~~g~Dv 103 (182)
T d1vj0a2 29 GKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAEEIGA--D-LTLNRRETSVEERRKAIMDITHGRGADF 103 (182)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHHHTTC--S-EEEETTTSCHHHHHHHHHHHTTTSCEEE
T ss_pred CCEEEEECC-Cccchhheecccccccccccccccccccc-cccccccc--e-EEEeccccchHHHHHHHHHhhCCCCceE
Confidence 578999997 8899999998888996 799999987663 23333331 1 222221123222222 22 24899
Q ss_pred EEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 80 VINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 80 vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
||.+.|... .....++.++..| +++.++.
T Consensus 104 vid~vG~~~-------------~~~~a~~~l~~~G---~iv~~G~ 132 (182)
T d1vj0a2 104 ILEATGDSR-------------ALLEGSELLRRGG---FYSVAGV 132 (182)
T ss_dssp EEECSSCTT-------------HHHHHHHHEEEEE---EEEECCC
T ss_pred EeecCCchh-------------HHHHHHHHhcCCC---EEEEEee
Confidence 999987521 1234455555554 6776664
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.94 E-value=0.00048 Score=51.01 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=66.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
..+++|+|+ |-.|.+-++.....|.+|++++.+.++.. .++.... ..++. -..+.+.+.+.++++|+||.++-.
T Consensus 32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~-~l~~~~~-~~~~~---~~~~~~~l~~~~~~aDivI~aali 105 (168)
T d1pjca1 32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLS-YLETLFG-SRVEL---LYSNSAEIETAVAEADLLIGAVLV 105 (168)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHG-GGSEE---EECCHHHHHHHHHTCSEEEECCCC
T ss_pred CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHH-HHHHhhc-cccee---ehhhhhhHHHhhccCcEEEEeeec
Confidence 568999999 99999999999999999999999876542 2222110 12333 234778899999999999999876
Q ss_pred ccccCcchhHhhhhHHHHHHHHHHHHc
Q 047628 87 EYETRNYSFEDVNHFMAERIAGIAKEH 113 (327)
Q Consensus 87 ~~~~~~~~~~~~n~~~~~~l~~a~~~~ 113 (327)
+....|.- .++.+++.++..
T Consensus 106 pG~~aP~l-------It~~mv~~Mk~G 125 (168)
T d1pjca1 106 PGRRAPIL-------VPASLVEQMRTG 125 (168)
T ss_dssp TTSSCCCC-------BCHHHHTTSCTT
T ss_pred CCcccCee-------ecHHHHhhcCCC
Confidence 65544421 134555555543
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=96.93 E-value=0.0001 Score=55.53 Aligned_cols=44 Identities=32% Similarity=0.314 Sum_probs=36.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG 52 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~ 52 (327)
..|||+||+|-+|...++.....|.+|+++++++++. ..+...+
T Consensus 25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~~~~lG 68 (167)
T d1tt7a2 25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA-DYLKQLG 68 (167)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH-HHHHHHT
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH-HHHHhhc
Confidence 4699999999999999998888899999999988773 4444444
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.89 E-value=0.00041 Score=52.26 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=50.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++|+|+|+ |-.++.++..|.+.+.+|+++.|+.++............++..+.-|-. .+..+|.||++.
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~-------~~~~~diiIN~t 87 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSI-------PLQTYDLVINAT 87 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGC-------CCSCCSEEEECC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhccc-------cccccceeeecc
Confidence 45679999999 6669999999998888999999997664433332221123444333211 246789999998
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+..
T Consensus 88 p~g 90 (171)
T d1p77a1 88 SAG 90 (171)
T ss_dssp CC-
T ss_pred ccc
Confidence 754
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=96.88 E-value=0.0049 Score=41.16 Aligned_cols=72 Identities=14% Similarity=-0.029 Sum_probs=50.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
..++|.++|..|--=+.|++.|.++|++|.+-++..+.....+.+.+ +.+..++ +++. +.++|.||...+
T Consensus 7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~G----i~v~~g~--~~~~----i~~~d~vV~S~A 76 (96)
T d1p3da1 7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAG----AKIYIGH--AEEH----IEGASVVVVSSA 76 (96)
T ss_dssp TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTT----CEEEESC--CGGG----GTTCSEEEECTT
T ss_pred hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCC----CeEEECC--cccc----CCCCCEEEECCC
Confidence 35789998874442277899999999999999998665555555433 5554443 3332 357899998877
Q ss_pred cc
Q 047628 86 RE 87 (327)
Q Consensus 86 ~~ 87 (327)
..
T Consensus 77 I~ 78 (96)
T d1p3da1 77 IK 78 (96)
T ss_dssp SC
T ss_pred cC
Confidence 64
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.88 E-value=0.0012 Score=47.01 Aligned_cols=90 Identities=14% Similarity=0.108 Sum_probs=60.5
Q ss_pred cCCcEEEEEcCC---CccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEE
Q 047628 5 YSGIIATVFGTT---GFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVV 80 (327)
Q Consensus 5 ~~~~~ilI~Gat---G~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~v 80 (327)
.+.++|+|+|+| +..|..+++.|.+.| ++|+.+..+.... . ++.. .-++.+ +=..+|.+
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i----~------G~~~-y~sl~d------lp~~vDlv 68 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV----Q------GVKA-YKSVKD------IPDEIDLA 68 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE----T------TEEC-BSSTTS------CSSCCSEE
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc----C------CeEe-ecchhh------cCCCCceE
Confidence 456899999999 899999999988766 6899986543221 0 1221 112222 22357988
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+-+... ..+..+++.|.+.| ++.++.+|+..
T Consensus 69 vi~vp~--------------~~~~~~~~~~~~~g-~~~~vi~s~Gf 99 (129)
T d2csua1 69 IIVVPK--------------RFVKDTLIQCGEKG-VKGVVIITAGF 99 (129)
T ss_dssp EECSCH--------------HHHHHHHHHHHHHT-CCEEEECCCSS
T ss_pred EEecCh--------------HHhHHHHHHHHHcC-CCEEEEecccc
Confidence 877643 34567888888888 88877777643
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.88 E-value=0.00046 Score=52.32 Aligned_cols=77 Identities=18% Similarity=0.185 Sum_probs=50.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
+|||.|+|- |..|.++++.|++.||+|++.+|++++.....+............. ..+.+.+...+...+.++-+..
T Consensus 1 ~MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 77 (178)
T d1pgja2 1 SMDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAASLKKPRKALILVQ 77 (178)
T ss_dssp CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHHHBCSSCEEEECCC
T ss_pred CCEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhh-hhhhhHHHHhcccceEEEEeec
Confidence 368999988 9999999999999999999999987764433332211111111111 2345566666667776665543
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.85 E-value=0.0025 Score=47.73 Aligned_cols=99 Identities=19% Similarity=0.219 Sum_probs=63.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh-----ccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM-----AKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-----~~~d~v 80 (327)
..+|+|+|+ |-+|...+..+...|. +|+++++++++.. ..++.+ . -..+..+-.++....+.+ .++|+|
T Consensus 27 gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~-~a~~~G--a-~~~~~~~~~~~~~~~~~~~~~~g~g~Dvv 101 (171)
T d1pl8a2 27 GHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLS-KAKEIG--A-DLVLQISKESPQEIARKVEGQLGCKPEVT 101 (171)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHH-HHHHTT--C-SEEEECSSCCHHHHHHHHHHHHTSCCSEE
T ss_pred CCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHH-HHHHhC--C-cccccccccccccccccccccCCCCceEE
Confidence 468999987 9999999998888897 7999998876632 233333 1 122333334554444444 258999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
|.+.|.. ......++.++..| ++++++...
T Consensus 102 id~~G~~-------------~~~~~a~~~~~~gG---~iv~~G~~~ 131 (171)
T d1pl8a2 102 IECTGAE-------------ASIQAGIYATRSGG---TLVLVGLGS 131 (171)
T ss_dssp EECSCCH-------------HHHHHHHHHSCTTC---EEEECSCCC
T ss_pred EeccCCc-------------hhHHHHHHHhcCCC---EEEEEecCC
Confidence 9998852 12234455555554 778777543
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.83 E-value=0.0011 Score=49.70 Aligned_cols=84 Identities=17% Similarity=0.152 Sum_probs=51.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhC-CCEEEEee-CCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKM-GSQVLVPF-RGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~-R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
|+++||.|+|. |.+|+.+++.|.+. +.+++++. |+.+... ...... ..+......++|+|+.
T Consensus 1 M~kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~D~Vvi 64 (170)
T d1f06a1 1 MTNIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRATLDT----------KTPVFD-----VADVDKHADDVDVLFL 64 (170)
T ss_dssp CCCEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSCCSS----------SSCEEE-----GGGGGGTTTTCSEEEE
T ss_pred CCcceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEeccccccc----------cccccc-----chhhhhhccccceEEE
Confidence 45689999996 99999999999875 57777664 4433211 111111 1223334567999998
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEE
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFI 120 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v 120 (327)
|.+... -..++..+.++| +++|
T Consensus 65 ~tp~~~--------------h~~~a~~aL~aG--~~vv 86 (170)
T d1f06a1 65 CMGSAT--------------DIPEQAPKFAQF--ACTV 86 (170)
T ss_dssp CSCTTT--------------HHHHHHHHHTTT--SEEE
T ss_pred eCCCcc--------------cHHHHHHHHHCC--CcEE
Confidence 875431 124566666777 3554
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.81 E-value=0.0029 Score=47.38 Aligned_cols=101 Identities=15% Similarity=0.145 Sum_probs=59.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCch-hhhcccCCCCCeeEEeeC-----------CCChhHHHH
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDP-RHLKLMGDLGQIVPMKFN-----------PRDDNTIKA 72 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~~~D-----------l~~~~~~~~ 72 (327)
|++||.|-|- |.||+.+++.+++++ .+|.++.-..+... ..+...+ ...+..+ +.....+..
T Consensus 1 M~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (172)
T d2czca2 1 MKVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELG----IPVYAASEEFIPRFEKEGFEVAGTLND 75 (172)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTT----CCEEESSGGGHHHHHHHTCCCSCBHHH
T ss_pred CcEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcC----ceeecccccceeeecccCccccchhhh
Confidence 4589999997 999999999998764 67777754322211 1121111 1111111 112234556
Q ss_pred HhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 73 TMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+++++|+|+.|.|... +..-++.-.++| + +.|++|+...
T Consensus 76 ~~~~vDvViEcTG~f~--------------~~~~~~~hl~~G-~-k~Vi~s~~~~ 114 (172)
T d2czca2 76 LLEKVDIIVDATPGGI--------------GAKNKPLYEKAG-V-KAIFQGGEKA 114 (172)
T ss_dssp HHTTCSEEEECCSTTH--------------HHHHHHHHHHHT-C-EEEECTTSCG
T ss_pred hhccCCEEEECCCCCC--------------CHHHHHHHHHcC-C-CEEEECCCCc
Confidence 6778999999998642 122334445668 6 5565665433
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=96.81 E-value=0.00061 Score=51.63 Aligned_cols=74 Identities=18% Similarity=0.237 Sum_probs=52.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhc--cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMA--KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~--~~d~vi 81 (327)
..+|||+||+|-+|..+++.+...|.+|+++++++++. +...+++ ... ..|..+++ .+.++-. ++|+|+
T Consensus 29 g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~-~~~~~lG----a~~-vi~~~~~d~~~~v~~~t~g~g~d~v~ 102 (179)
T d1qora2 29 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSALKAG----AWQ-VINYREEDLVERLKEITGGKKVRVVY 102 (179)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHHHT----CSE-EEETTTSCHHHHHHHHTTTCCEEEEE
T ss_pred CCEEEEEccccccchHHHHHHHHhCCeEeecccchHHH-HHHHhcC----CeE-EEECCCCCHHHHHHHHhCCCCeEEEE
Confidence 56899999999999999998888999999999997763 3344444 221 23555543 3333332 379999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
++.+.
T Consensus 103 d~~g~ 107 (179)
T d1qora2 103 DSVGR 107 (179)
T ss_dssp ECSCG
T ss_pred eCccH
Confidence 99874
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.80 E-value=0.00065 Score=50.05 Aligned_cols=65 Identities=20% Similarity=0.240 Sum_probs=45.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|+|.++|+ |.+|+++++.|++.| ++|++.+|++++... +.... .+... .| .+. +.++|+||-+.-
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~-l~~~~---~~~~~-~~---~~~----v~~~Div~lavk 66 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRER-LEKEL---GVETS-AT---LPE----LHSDDVLILAVK 66 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHH-HHHHT---CCEEE-SS---CCC----CCTTSEEEECSC
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHH-hhhhc---ccccc-cc---ccc----ccccceEEEecC
Confidence 68999998 999999999999887 999999999766432 32221 23322 12 122 456899997753
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.78 E-value=0.001 Score=50.24 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=47.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhh-hcccCC-----CCCeeEE-eeCCCChhHHHHHhcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRH-LKLMGD-----LGQIVPM-KFNPRDDNTIKATMAKAN 78 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~-~~~~~~-----~~~v~~~-~~Dl~~~~~~~~~~~~~d 78 (327)
|.||.|-| .|.||+.+++.|.+++ .+|+++....+..... +...+. ......+ ...+.-...+..++.++|
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD 79 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence 46899998 5999999999999874 7888886544332211 111110 0000000 011111234555667899
Q ss_pred EEEEccccc
Q 047628 79 VVINLIGRE 87 (327)
Q Consensus 79 ~vi~~a~~~ 87 (327)
+|+.|.|..
T Consensus 80 iViecTG~f 88 (178)
T d1b7go1 80 IVVDTTPNG 88 (178)
T ss_dssp EEEECCSTT
T ss_pred EEEECCCCc
Confidence 999999863
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.72 E-value=0.0025 Score=48.21 Aligned_cols=64 Identities=23% Similarity=0.278 Sum_probs=49.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++|.|+|. |.||+.+++.|..-|.+|++.+|.+.... .. ..+++.++++.+|+|+.+.
T Consensus 40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~~~-----------~~-------~~~~l~ell~~sDiv~~~~ 100 (181)
T d1qp8a1 40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKEGP-----------WR-------FTNSLEEALREARAAVCAL 100 (181)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCCSS-----------SC-------CBSCSHHHHTTCSEEEECC
T ss_pred ccCceEEEecc-ccccccceeeeeccccccccccccccccc-----------ee-------eeechhhhhhccchhhccc
Confidence 45689999999 99999999999999999999998754321 01 1135678889999999776
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
..+
T Consensus 101 pl~ 103 (181)
T d1qp8a1 101 PLN 103 (181)
T ss_dssp CCS
T ss_pred ccc
Confidence 543
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=96.70 E-value=0.00037 Score=53.29 Aligned_cols=36 Identities=25% Similarity=0.279 Sum_probs=32.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
++|.|+|+ |.+|+.++..++..|++|++++++++..
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l 40 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGI 40 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHH
Confidence 57999999 9999999999999999999999987653
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=96.65 E-value=0.0018 Score=48.38 Aligned_cols=73 Identities=21% Similarity=0.301 Sum_probs=54.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcccc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIGR 86 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~~ 86 (327)
..+|+|.|+ |-+|...++.+...|.+++++++++++. ...++.+ ... ..|..+++......+++|++|.+.+.
T Consensus 31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a~~lG----ad~-~i~~~~~~~~~~~~~~~D~vid~~g~ 103 (168)
T d1uufa2 31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAAKALG----ADE-VVNSRNADEMAAHLKSFDFILNTVAA 103 (168)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHT----CSE-EEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred CCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH-HHHhccC----CcE-EEECchhhHHHHhcCCCceeeeeeec
Confidence 578999997 8899999988888999999998877653 3344444 221 24566666666666789999999874
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=96.64 E-value=0.00034 Score=53.06 Aligned_cols=96 Identities=18% Similarity=0.164 Sum_probs=60.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEEccc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVINLIG 85 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~~a~ 85 (327)
..|||+||+|-+|...++.....|.+|++++|++++. ..++..+ ...+ .|..+++ ..+.+. ..|.+|++.+
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~-~~~~~lG----ad~v-i~~~~~~-~~~~l~~~~~~~vvD~Vg 105 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH-EYLKSLG----ASRV-LPRDEFA-ESRPLEKQVWAGAIDTVG 105 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH-HHHHHHT----EEEE-EEGGGSS-SCCSSCCCCEEEEEESSC
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH-HHHHhhc----cccc-cccccHH-HHHHHHhhcCCeeEEEcc
Confidence 3799999999999999998888999999999988773 3344443 2222 1222221 222232 2588998876
Q ss_pred cccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 86 REYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 86 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
-. .....++.++..| ++|.++....
T Consensus 106 g~--------------~~~~~l~~l~~~G---riv~~G~~~~ 130 (177)
T d1o89a2 106 DK--------------VLAKVLAQMNYGG---CVAACGLAGG 130 (177)
T ss_dssp HH--------------HHHHHHHTEEEEE---EEEECCCTTC
T ss_pred hH--------------HHHHHHHHhcccc---ceEeecccCC
Confidence 31 1233444444444 7887776543
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.62 E-value=0.0032 Score=43.72 Aligned_cols=101 Identities=12% Similarity=0.136 Sum_probs=64.0
Q ss_pred cEEEEEcCC---CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 8 IIATVFGTT---GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 8 ~~ilI~Gat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
++|.|+|+| +..|..+++.|++.||+|+.+..+.+. +. ++..+ .++.++=..+|.++-+.
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~----i~------G~~~y-------~sl~~lp~~~D~vvi~v 64 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----IE------GLKCY-------RSVRELPKDVDVIVFVV 64 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----ET------TEECB-------SSGGGSCTTCCEEEECS
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc----cc------Ccccc-------ccchhccccceEEEEEe
Confidence 579999988 778999999999999999988543221 11 12221 12222223579888776
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPW 152 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~ 152 (327)
.. ..+..+++.|.+.| ++.+++-++. . + -.+++.+++.+++
T Consensus 65 p~--------------~~~~~~l~~~~~~g-~k~v~~~~g~--~----~------~~~~~~a~~~gi~ 105 (116)
T d1y81a1 65 PP--------------KVGLQVAKEAVEAG-FKKLWFQPGA--E----S------EEIRRFLEKAGVE 105 (116)
T ss_dssp CH--------------HHHHHHHHHHHHTT-CCEEEECTTS--C----C------HHHHHHHHHHTCE
T ss_pred CH--------------HHHHHHHHHHHhcC-CceEEeccch--h----h------HHHHHHHHHcCCE
Confidence 43 34567788888888 8766553321 1 1 1345667777753
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.61 E-value=0.0028 Score=45.57 Aligned_cols=85 Identities=13% Similarity=-0.016 Sum_probs=57.8
Q ss_pred CcEEEEEcCC---CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTT---GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~Gat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
.++|+|+|+| +..|..+++.|.+.||+|+.+...... +. +...+ .++.++-..+|.|+-+
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~----i~------G~~~~-------~sl~dlp~~iD~v~i~ 81 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE----VL------GRKCY-------PSVLDIPDKIEVVDLF 81 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----ET------TEECB-------SSGGGCSSCCSEEEEC
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc----cC------CCccc-------ccccccCccceEEEEE
Confidence 5789999998 789999999999999999988644221 10 12211 1233333457888877
Q ss_pred cccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEe
Q 047628 84 IGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQIS 123 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~S 123 (327)
... ..+..+++.|.+.| ++.+++-+
T Consensus 82 vp~--------------~~~~~~~~e~~~~g-~k~v~~~~ 106 (139)
T d2d59a1 82 VKP--------------KLTMEYVEQAIKKG-AKVVWFQY 106 (139)
T ss_dssp SCH--------------HHHHHHHHHHHHHT-CSEEEECT
T ss_pred eCH--------------HHHHHHHHHHHHhC-CCEEEEec
Confidence 643 34567888888888 87666533
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.58 E-value=0.0009 Score=50.48 Aligned_cols=97 Identities=16% Similarity=0.145 Sum_probs=60.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC---hhHHHHHhc--cccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD---DNTIKATMA--KANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~---~~~~~~~~~--~~d~v 80 (327)
..+|+|+|+ |-+|...++.+...|. +|+++++++++. ...+..+. .+++ |..+ .+.+.+... ++|+|
T Consensus 28 g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~-~~a~~lGa---~~~i--~~~~~~~~~~v~~~t~g~G~D~v 100 (174)
T d1jqba2 28 GSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICV-EAAKFYGA---TDIL--NYKNGHIEDQVMKLTNGKGVDRV 100 (174)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHH-HHHHHHTC---SEEE--CGGGSCHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhH-HHHHhhCc---cccc--cccchhHHHHHHHHhhccCcceE
Confidence 468999987 9999999988888885 799998876553 33333331 1222 3322 234444443 48999
Q ss_pred EEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 81 INLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 81 i~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
|.++|... .....++.++..| +++.++..+
T Consensus 101 id~~g~~~-------------~~~~a~~~~~~~G---~iv~~G~~~ 130 (174)
T d1jqba2 101 IMAGGGSE-------------TLSQAVKMVKPGG---IISNINYHG 130 (174)
T ss_dssp EECSSCTT-------------HHHHHHHHEEEEE---EEEECCCCC
T ss_pred EEccCCHH-------------HHHHHHHHHhcCC---EEEEEeecC
Confidence 99998531 1233455555544 777766443
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=96.54 E-value=0.0038 Score=46.73 Aligned_cols=80 Identities=13% Similarity=0.178 Sum_probs=57.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEee--------------------CC--
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF--------------------NP-- 64 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~--------------------Dl-- 64 (327)
.-+|+|+|| |-.|.+-++..+..|..|++++.+..+. +.+++.+ -.++.. +.
T Consensus 29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~-~~l~~l~----~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~ 102 (183)
T d1l7da1 29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK-EQVESLG----GKFITVDDEAMKTAETAGGYAKEMGEEFRK 102 (183)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH-HHHHHTT----CEECCC-----------------------C
T ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHH-HHHHHhh----cceEEEeccccccccccccchhhcCHHHHH
Confidence 358999999 9999999999999999999999998874 3343332 111111 11
Q ss_pred CChhHHHHHhccccEEEEccccccccCc
Q 047628 65 RDDNTIKATMAKANVVINLIGREYETRN 92 (327)
Q Consensus 65 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~ 92 (327)
.+.+.+.+.+.++|.||-++-.+....|
T Consensus 103 ~~~~~l~~~l~~aDlVI~talipG~~aP 130 (183)
T d1l7da1 103 KQAEAVLKELVKTDIAITTALIPGKPAP 130 (183)
T ss_dssp CHHHHHHHHHTTCSEEEECCCCTTSCCC
T ss_pred HHHHHHHHHHHhhhhheeeeecCCcccc
Confidence 1345677788899999988876655444
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.38 E-value=0.0024 Score=44.81 Aligned_cols=36 Identities=14% Similarity=0.074 Sum_probs=32.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|-.++..|.+.|.+|+++.|.+.-
T Consensus 30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~ 65 (121)
T d1d7ya2 30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL 65 (121)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence 478999999 999999999999999999999988654
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.36 E-value=0.0032 Score=48.09 Aligned_cols=69 Identities=17% Similarity=0.172 Sum_probs=50.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...+++.|+|. |.||+.+++.|..-|.+|.+.++.......... ++ ...+++.++++.+|+|+.+.
T Consensus 47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~------~~-------~~~~~l~~ll~~sD~i~~~~ 112 (193)
T d1mx3a1 47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSDGVERAL------GL-------QRVSTLQDLLFHSDCVTLHC 112 (193)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCTTHHHHH------TC-------EECSSHHHHHHHCSEEEECC
T ss_pred eeCceEEEecc-ccccccceeeeeccccceeeccCcccccchhhh------cc-------ccccchhhccccCCEEEEee
Confidence 45689999998 999999999999999999999887654322110 11 12246777788899888666
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
..+
T Consensus 113 plt 115 (193)
T d1mx3a1 113 GLN 115 (193)
T ss_dssp CCC
T ss_pred ccc
Confidence 543
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.35 E-value=0.0024 Score=44.50 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=32.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i 57 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI 57 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence 478999999 999999999999999999999987654
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.34 E-value=0.002 Score=48.12 Aligned_cols=67 Identities=18% Similarity=0.267 Sum_probs=45.7
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
.+++|+|+|+ |-.|++++..|.+.|. +|+++.|+.++........+ ...+ +..+ ..++|.||++.
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~----~~~~--~~~~-------~~~~DliINaT 81 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG----YAYI--NSLE-------NQQADILVNVT 81 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT----CEEE--SCCT-------TCCCSEEEECS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh----hhhh--hccc-------ccchhhheecc
Confidence 4578999999 7789999999999995 79999998765433222211 2221 1111 13589999997
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
+.
T Consensus 82 pi 83 (167)
T d1npya1 82 SI 83 (167)
T ss_dssp ST
T ss_pred cc
Confidence 65
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.27 E-value=0.0031 Score=48.29 Aligned_cols=67 Identities=15% Similarity=0.176 Sum_probs=49.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++|.|+|- |.||+.+++.|..-|.+|.+.++........ +....+++.++++.+|+|+.+.
T Consensus 41 l~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~---------------~~~~~~~l~~~l~~sDii~~~~ 104 (197)
T d1j4aa1 41 VRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPELEK---------------KGYYVDSLDDLYKQADVISLHV 104 (197)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---------------TTCBCSCHHHHHHHCSEEEECS
T ss_pred ccCCeEEEecc-cccchhHHHhHhhhcccccccCccccccccc---------------ceeeeccccccccccccccccC
Confidence 45689999998 9999999999998899999998764431110 0112345777888999988776
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
..+
T Consensus 105 plt 107 (197)
T d1j4aa1 105 PDV 107 (197)
T ss_dssp CCC
T ss_pred Ccc
Confidence 554
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=96.26 E-value=0.00075 Score=50.71 Aligned_cols=73 Identities=22% Similarity=0.167 Sum_probs=45.8
Q ss_pred CcEEEEEcCCCccHHH--HHHHHHhC----CCEEEEeeCCCCCchhhh-------cccCCCCCeeEEeeCCCChhHHHHH
Q 047628 7 GIIATVFGTTGFLGRY--VVQQLAKM----GSQVLVPFRGCEDDPRHL-------KLMGDLGQIVPMKFNPRDDNTIKAT 73 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~--l~~~Ll~~----g~~V~~~~R~~~~~~~~~-------~~~~~~~~v~~~~~Dl~~~~~~~~~ 73 (327)
+|||.|+|| |.+|.. ++..|+.. +.++.++++++++..... .... ...++.. ..+..++
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~--~~~~i~~-----~td~~ea 73 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVG--ADLKFEK-----TMNLDDV 73 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTT--CCCEEEE-----ESCHHHH
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcC--CCeEEEE-----eCChhhc
Confidence 589999998 888864 44445543 469999999876532111 1111 1222222 2345678
Q ss_pred hccccEEEEccccc
Q 047628 74 MAKANVVINLIGRE 87 (327)
Q Consensus 74 ~~~~d~vi~~a~~~ 87 (327)
++++|+|+.+++..
T Consensus 74 L~dad~Vv~~~~~g 87 (171)
T d1obba1 74 IIDADFVINTAMVG 87 (171)
T ss_dssp HTTCSEEEECCCTT
T ss_pred ccCCCeEeeecccc
Confidence 89999999998753
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.23 E-value=0.0039 Score=43.73 Aligned_cols=36 Identities=22% Similarity=0.198 Sum_probs=32.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |+||-.++..|.+.|.+|+++.|.+.-
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence 479999999 999999999999999999999987654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.22 E-value=0.0029 Score=44.11 Aligned_cols=35 Identities=14% Similarity=0.377 Sum_probs=32.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
.++|+|+|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence 478999999 99999999999999999999998754
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.20 E-value=0.0045 Score=43.23 Aligned_cols=36 Identities=22% Similarity=0.139 Sum_probs=32.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |+||-.++..|.+.|.+|+++.|...-
T Consensus 22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~l 57 (119)
T d3lada2 22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKF 57 (119)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeeccc
Confidence 478999999 999999999999999999999987643
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.18 E-value=0.0038 Score=43.88 Aligned_cols=36 Identities=25% Similarity=0.230 Sum_probs=32.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++|+|+|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus 30 ~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~ 65 (123)
T d1nhpa2 30 VNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRP 65 (123)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcc
Confidence 468999998 999999999999999999999887543
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.18 E-value=0.0054 Score=47.02 Aligned_cols=67 Identities=12% Similarity=0.127 Sum_probs=49.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++|.|+|. |.||+.+++.|..-|.+|++.++....... ..+. ..++.++++.+|+|+.+.
T Consensus 43 l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--------~~~~--------~~~l~~l~~~~D~v~~~~ 105 (199)
T d1dxya1 43 LGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKGDH--------PDFD--------YVSLEDLFKQSDVIDLHV 105 (199)
T ss_dssp GGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSSCC--------TTCE--------ECCHHHHHHHCSEEEECC
T ss_pred ccceeeeeeec-ccccccccccccccceeeeccCCccchhhh--------cchh--------HHHHHHHHHhcccceeee
Confidence 45689999998 999999999999999999999887554211 1111 124677788899988766
Q ss_pred cccc
Q 047628 85 GREY 88 (327)
Q Consensus 85 ~~~~ 88 (327)
..+.
T Consensus 106 plt~ 109 (199)
T d1dxya1 106 PGIE 109 (199)
T ss_dssp CCCG
T ss_pred cccc
Confidence 5443
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.17 E-value=0.0035 Score=43.51 Aligned_cols=36 Identities=25% Similarity=0.201 Sum_probs=32.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
+++++|+|| |++|-.++..|.+.|.+|+++.|.+.-
T Consensus 21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~i 56 (115)
T d1lvla2 21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERI 56 (115)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeeccc
Confidence 478999999 999999999999999999999887543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.14 E-value=0.0036 Score=43.51 Aligned_cols=36 Identities=14% Similarity=0.112 Sum_probs=32.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|..++..|.+.|.+|+++.|.+.-
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~ 56 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP 56 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence 478999999 999999999999999999999987644
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.09 E-value=0.0014 Score=50.02 Aligned_cols=98 Identities=20% Similarity=0.225 Sum_probs=58.8
Q ss_pred cEEEE-EcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh---hhcccCCCCCeeEEee---CCCCh-hHHHHHh----c
Q 047628 8 IIATV-FGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR---HLKLMGDLGQIVPMKF---NPRDD-NTIKATM----A 75 (327)
Q Consensus 8 ~~ilI-~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~---~~~~~~~~~~v~~~~~---Dl~~~-~~~~~~~----~ 75 (327)
.+++| .||+|-+|...++.....|.+|++++|+++.... .+++++. . ..+.- |..+. +.+.+.. .
T Consensus 30 ~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGa--d-~vi~~~~~~~~~~~~~v~~~~~~~g~ 106 (189)
T d1gu7a2 30 KDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGA--T-QVITEDQNNSREFGPTIKEWIKQSGG 106 (189)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTC--S-EEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred CEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccc--c-EEEeccccchhHHHHHHHHHHhhccC
Confidence 45676 5899999999999888889999999998766432 2233331 1 12221 22121 1223322 3
Q ss_pred cccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 76 KANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 76 ~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
++|+|+++.|.. .....++.++..| ++|.++..
T Consensus 107 ~vdvv~D~vg~~--------------~~~~~~~~l~~~G---~~v~~G~~ 139 (189)
T d1gu7a2 107 EAKLALNCVGGK--------------SSTGIARKLNNNG---LMLTYGGM 139 (189)
T ss_dssp CEEEEEESSCHH--------------HHHHHHHTSCTTC---EEEECCCC
T ss_pred CceEEEECCCcc--------------hhhhhhhhhcCCc---EEEEECCc
Confidence 489999998632 1234455555555 77766543
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.06 E-value=0.0036 Score=46.71 Aligned_cols=74 Identities=19% Similarity=0.151 Sum_probs=48.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHH---HHh--ccccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIK---ATM--AKANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~---~~~--~~~d~v 80 (327)
..+|+|+|++|-+|...+..+...| .+|+++.+++++. ...+..+. . ..+ |..+.+... +.. .++|+|
T Consensus 28 g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~-~~~~~~Ga--~-~~i--~~~~~~~~~~~~~~~~~~~~d~v 101 (170)
T d1jvba2 28 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAAKRAGA--D-YVI--NASMQDPLAEIRRITESKGVDAV 101 (170)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHHHHHTC--S-EEE--ETTTSCHHHHHHHHTTTSCEEEE
T ss_pred CCEEEEEeccccceeeeeecccccccccccccccchhhH-HHHHHcCC--c-eee--ccCCcCHHHHHHHHhhcccchhh
Confidence 4689999999999999999888888 5888888876552 33333331 1 222 333333233 222 248999
Q ss_pred EEcccc
Q 047628 81 INLIGR 86 (327)
Q Consensus 81 i~~a~~ 86 (327)
|.|++.
T Consensus 102 id~~g~ 107 (170)
T d1jvba2 102 IDLNNS 107 (170)
T ss_dssp EESCCC
T ss_pred hccccc
Confidence 999875
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.04 E-value=0.0039 Score=43.77 Aligned_cols=34 Identities=32% Similarity=0.461 Sum_probs=31.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
++++|+|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus 33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 68999999 99999999999999999999988754
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.01 E-value=0.0059 Score=45.72 Aligned_cols=73 Identities=15% Similarity=0.181 Sum_probs=45.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEE-EEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhc-cccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQV-LVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMA-KANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V-~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~-~~d~vi 81 (327)
..+|+|+|+ |-+|...+..+...|.++ ++.++++.+ .+..++++ -.+++ |..+++ .+.++.. ++|+||
T Consensus 29 g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k-~~~a~~~G---a~~~i--~~~~~~~~~~i~~~t~gg~D~vi 101 (174)
T d1f8fa2 29 ASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESR-LELAKQLG---ATHVI--NSKTQDPVAAIKEITDGGVNFAL 101 (174)
T ss_dssp TCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHH-HHHHHHHT---CSEEE--ETTTSCHHHHHHHHTTSCEEEEE
T ss_pred CCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHH-HHHHHHcC---CeEEE--eCCCcCHHHHHHHHcCCCCcEEE
Confidence 568999998 999999998887888754 555555443 33333443 12333 333332 2333322 489999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
.|.|.
T Consensus 102 d~~G~ 106 (174)
T d1f8fa2 102 ESTGS 106 (174)
T ss_dssp ECSCC
T ss_pred EcCCc
Confidence 99875
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.97 E-value=0.0043 Score=49.27 Aligned_cols=34 Identities=26% Similarity=0.311 Sum_probs=31.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
.++|+|+|| |..|...+..|.++|++|.++.|..
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 468999999 9999999999999999999999864
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=95.94 E-value=0.012 Score=43.81 Aligned_cols=78 Identities=18% Similarity=0.179 Sum_probs=45.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCch-hhhcccCCCCCeeEE---------eeCCCChhHHHHHhc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDP-RHLKLMGDLGQIVPM---------KFNPRDDNTIKATMA 75 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~-~~~~~~~~~~~v~~~---------~~Dl~~~~~~~~~~~ 75 (327)
|++|.|-|- |.||+.+++.|++++ .+|.++.-..+... ..+...+ . .+... ...+.-...+..+++
T Consensus 1 M~~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~~~~~v~g~~~~~~~ 77 (171)
T d1cf2o1 1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKG-Y-DLYVAIPERVKLFEKAGIEVAGTVDDMLD 77 (171)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTT-C-CEEESSGGGHHHHHHTTCCCCEEHHHHHH
T ss_pred CeEEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcC-C-ceEecccccceeecccCcccCCChhHhhc
Confidence 468999985 999999999998875 67777754332221 1111111 0 01000 000111224556677
Q ss_pred cccEEEEccccc
Q 047628 76 KANVVINLIGRE 87 (327)
Q Consensus 76 ~~d~vi~~a~~~ 87 (327)
++|+|+.|.|..
T Consensus 78 ~vDvViEcTG~f 89 (171)
T d1cf2o1 78 EADIVIDCTPEG 89 (171)
T ss_dssp TCSEEEECCSTT
T ss_pred CCCEEEEccCCC
Confidence 899999999864
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.92 E-value=0.0051 Score=43.32 Aligned_cols=36 Identities=17% Similarity=0.248 Sum_probs=32.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|-.++..|.+.|.+|+++.|++.-
T Consensus 22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~ 57 (125)
T d3grsa2 22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKV 57 (125)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecccc
Confidence 478999999 999999999999999999999997643
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=95.91 E-value=0.0093 Score=45.22 Aligned_cols=67 Identities=12% Similarity=0.048 Sum_probs=49.4
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...++|+|+|- |.||+.+++.|..-|.+|+..++........ .. ..+++.++++.+|+|+.+.
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~---------~~-------~~~~l~ell~~sDii~i~~ 104 (188)
T d1sc6a1 42 ARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKLPLGN---------AT-------QVQHLSDLLNMSDVVSLHV 104 (188)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCCCCTT---------CE-------ECSCHHHHHHHCSEEEECC
T ss_pred ccceEEEEeec-ccchhhhhhhcccccceEeeccccccchhhh---------hh-------hhhhHHHHHhhccceeecc
Confidence 45678999987 9999999999999999999998865432211 11 1135777888899998776
Q ss_pred cccc
Q 047628 85 GREY 88 (327)
Q Consensus 85 ~~~~ 88 (327)
+.+.
T Consensus 105 plt~ 108 (188)
T d1sc6a1 105 PENP 108 (188)
T ss_dssp CSST
T ss_pred cCCc
Confidence 6543
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=95.88 E-value=0.0049 Score=43.20 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
.++++|+|| |+||..++..|.+.|.+|+++.|+
T Consensus 20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 468999999 999999999999999999999875
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=95.85 E-value=0.0081 Score=45.65 Aligned_cols=70 Identities=4% Similarity=0.028 Sum_probs=49.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...+++.|+|. |.||+.+++.|..-|.+|.+.++............ . ...+++.++++.+|+|+.+.
T Consensus 45 l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~~-----~-------~~~~~l~~ll~~sD~v~l~~ 111 (191)
T d1gdha1 45 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASYQ-----A-------TFHDSLDSLLSVSQFFSLNA 111 (191)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHHT-----C-------EECSSHHHHHHHCSEEEECC
T ss_pred ecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhccc-----c-------cccCCHHHHHhhCCeEEecC
Confidence 34689999998 99999999999999999999988665432221110 0 12246778888899988665
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
..+
T Consensus 112 plt 114 (191)
T d1gdha1 112 PST 114 (191)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=95.83 E-value=0.0071 Score=42.61 Aligned_cols=93 Identities=13% Similarity=0.069 Sum_probs=59.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHh-CCCEEEEeeCCCCCc-hhhhcccCCCCCeeEEeeCCCChhHHHHHhcc-ccEEEEcc
Q 047628 8 IIATVFGTTGFLGRYVVQQLAK-MGSQVLVPFRGCEDD-PRHLKLMGDLGQIVPMKFNPRDDNTIKATMAK-ANVVINLI 84 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~R~~~~~-~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~-~d~vi~~a 84 (327)
.+|+|.|| |.+|+.|++.+.. .++++.++.-+.... ...+ .++.++ ..+.+.+.... ++.++-+.
T Consensus 4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~I------~Gi~V~-----~~~~l~~~~~~~i~iai~~i 71 (126)
T d2dt5a2 4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRPV------RGGVIE-----HVDLLPQRVPGRIEIALLTV 71 (126)
T ss_dssp EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCEE------TTEEEE-----EGGGHHHHSTTTCCEEEECS
T ss_pred ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCEE------CCEEEe-----cHHHHHHHHhhcccEEEEeC
Confidence 58999999 9999999997753 478988876554332 2111 135544 23456655543 56655554
Q ss_pred ccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 85 GREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 85 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
.. ...+.+++.|.+.| ++.+.-++....
T Consensus 72 ~~--------------~~~~~I~d~l~~~g-Ik~I~~f~~~~l 99 (126)
T d2dt5a2 72 PR--------------EAAQKAADLLVAAG-IKGILNFAPVVL 99 (126)
T ss_dssp CH--------------HHHHHHHHHHHHHT-CCEEEECSSSCC
T ss_pred CH--------------HHHHHHHHHHHHcC-CCEEeecCceee
Confidence 32 23467888898999 987776655443
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.82 E-value=0.0038 Score=47.43 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=45.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCE-EEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hHHHHHh-ccccEEEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQ-VLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NTIKATM-AKANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~-~~~d~vi~ 82 (327)
..|||+||+|-+|+..++.+...|.+ |+++++++++........+ ... ..|..++ +.+.++. +++|+||+
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~g----ad~-vi~~~~~~~~~~~~~~~~~GvDvv~D 106 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELG----FDA-AVNYKTGNVAEQLREACPGGVDVYFD 106 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSC----CSE-EEETTSSCHHHHHHHHCTTCEEEEEE
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhccc----ceE-EeeccchhHHHHHHHHhccCceEEEe
Confidence 57999999999999999988778865 5555555444332222333 111 2244332 2333333 35899999
Q ss_pred ccc
Q 047628 83 LIG 85 (327)
Q Consensus 83 ~a~ 85 (327)
+.|
T Consensus 107 ~vG 109 (187)
T d1vj1a2 107 NVG 109 (187)
T ss_dssp SSC
T ss_pred cCC
Confidence 987
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.78 E-value=0.0062 Score=43.39 Aligned_cols=36 Identities=19% Similarity=0.180 Sum_probs=32.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|-.++..|.+.|.+|+++.|.+.-
T Consensus 35 ~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 35 DNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence 578999999 999999999999999999999987654
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.75 E-value=0.0087 Score=44.28 Aligned_cols=72 Identities=24% Similarity=0.249 Sum_probs=47.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC---hhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD---DNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~---~~~~~~~~~~~d~vi~~ 83 (327)
..+|+|.|+ |-+|...+..+...|.+|+++++++++. ...+..+ ...+. |..+ .+.+.+...+.|.+|.+
T Consensus 28 g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~-~~~k~~G----a~~~~-~~~~~~~~~~~~~~~~~~~~~v~~ 100 (168)
T d1rjwa2 28 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL-ELAKELG----ADLVV-NPLKEDAAKFMKEKVGGVHAAVVT 100 (168)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTT----CSEEE-CTTTSCHHHHHHHHHSSEEEEEES
T ss_pred CCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHh-hhhhhcC----cceec-ccccchhhhhcccccCCCceEEee
Confidence 468999876 8899999888888999999999877663 3334443 22222 2222 23455555667777767
Q ss_pred cc
Q 047628 84 IG 85 (327)
Q Consensus 84 a~ 85 (327)
++
T Consensus 101 ~~ 102 (168)
T d1rjwa2 101 AV 102 (168)
T ss_dssp SC
T ss_pred cC
Confidence 65
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=95.74 E-value=0.0094 Score=44.09 Aligned_cols=73 Identities=22% Similarity=0.221 Sum_probs=46.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~~~d~vi~~ 83 (327)
..+|+|.|+ |-+|...+..+...|.+|+++++++++. +..++.+. -+.+ |..+. +.+.+...+.|.+|.+
T Consensus 28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~-~~a~~~Ga---~~~i--~~~~~~~~~~~~~~~~g~~~~i~~ 100 (166)
T d1llua2 28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL-ELARKLGA---SLTV--NARQEDPVEAIQRDIGGAHGVLVT 100 (166)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHTTC---SEEE--ETTTSCHHHHHHHHHSSEEEEEEC
T ss_pred CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH-HhhhccCc---cccc--cccchhHHHHHHHhhcCCcccccc
Confidence 568999987 8899999988888899999999887663 23333331 1222 33333 3334444556666666
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
++.
T Consensus 101 ~~~ 103 (166)
T d1llua2 101 AVS 103 (166)
T ss_dssp CSC
T ss_pred ccc
Confidence 543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.73 E-value=0.047 Score=43.06 Aligned_cols=102 Identities=16% Similarity=0.145 Sum_probs=62.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhh----------------------hcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRH----------------------LKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~----------------------~~~~~~~~~v~~~~~ 62 (327)
++.+|+|+|+ |-+|++++..|...|. ++++++.+.-..... +.... +.+++...
T Consensus 29 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~n--p~~~i~~~ 105 (247)
T d1jw9b_ 29 KDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRIN--PHIAITPV 105 (247)
T ss_dssp HHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHC--TTSEEEEE
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhh--cccchhhh
Confidence 3579999998 7799999999999996 688876553221110 11111 33444433
Q ss_pred CC-CChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 63 NP-RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 63 Dl-~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
+. .+.+.....+.+.|+|+.+... ......+-++|.+.+ + .+|+.+..
T Consensus 106 ~~~~~~~~~~~~~~~~divid~~d~-------------~~~~~~in~~~~~~~-i-p~i~g~~~ 154 (247)
T d1jw9b_ 106 NALLDDAELAALIAEHDLVLDCTDN-------------VAVRNQLNAGCFAAK-V-PLVSGAAI 154 (247)
T ss_dssp CSCCCHHHHHHHHHTSSEEEECCSS-------------HHHHHHHHHHHHHHT-C-CEEEEEEE
T ss_pred hhhhhhccccccccccceeeeccch-------------hhhhhhHHHHHHHhC-C-Cccccccc
Confidence 32 2345556667788999887632 233445677788887 4 56665543
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.73 E-value=0.005 Score=47.09 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=28.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
|||.|+| .|++|..++..| +.|++|++++-++..
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~ 34 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSK 34 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHH
Confidence 7899997 599999998644 679999999877543
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.72 E-value=0.02 Score=42.04 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=32.2
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
...++|+|+|-+..+|+.++..|.++|..|+......
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t 71 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 71 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred cccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence 4578999999999999999999999999998875443
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=95.67 E-value=0.0064 Score=48.44 Aligned_cols=37 Identities=22% Similarity=0.079 Sum_probs=33.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
+..+||+|+|| |..|..++..|.++|++|+++.|+++
T Consensus 2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 34689999999 99999999999999999999998754
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.56 E-value=0.016 Score=42.39 Aligned_cols=72 Identities=10% Similarity=0.049 Sum_probs=41.2
Q ss_pred CcEEEEEcCCCccHHHHH-HHHHhC-CCEEEEe-eCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHH--hccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVV-QQLAKM-GSQVLVP-FRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKAT--MAKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~-~~Ll~~-g~~V~~~-~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~--~~~~d~vi 81 (327)
++|+.|+| +|.+|+.+. +.|... ..+++++ +|+.+.....+.... ++.... .+.+++.+. +.++|+||
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~---~i~~~~---~~~d~l~~~~~~~~iDiVf 76 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM---GVTTTY---AGVEGLIKLPEFADIDFVF 76 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT---TCCEES---SHHHHHHHSGGGGGEEEEE
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc---CCcccc---cceeeeeecccccccCEEE
Confidence 47899999 799998755 544444 3577776 566554332222111 233221 234455443 35789999
Q ss_pred Eccc
Q 047628 82 NLIG 85 (327)
Q Consensus 82 ~~a~ 85 (327)
.+..
T Consensus 77 ~ATp 80 (157)
T d1nvmb1 77 DATS 80 (157)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 8764
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.54 E-value=0.01 Score=44.84 Aligned_cols=68 Identities=19% Similarity=0.235 Sum_probs=48.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...+++.|+|. |.||+.+++.+..-|.+|.+.+|...+.... . . .++ ..++.++++.+|+|+.+.
T Consensus 42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-~-~----~~~--------~~~l~ell~~sDiv~~~~ 106 (184)
T d1ygya1 42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPARAA-Q-L----GIE--------LLSLDDLLARADFISVHL 106 (184)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHHHH-H-H----TCE--------ECCHHHHHHHCSEEEECC
T ss_pred ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhHHh-h-c----Cce--------eccHHHHHhhCCEEEEcC
Confidence 34678899887 9999999999988899999998775442211 0 0 111 235677888899988766
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
+.+
T Consensus 107 Plt 109 (184)
T d1ygya1 107 PKT 109 (184)
T ss_dssp CCS
T ss_pred CCC
Confidence 554
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=95.54 E-value=0.0097 Score=37.73 Aligned_cols=36 Identities=28% Similarity=0.220 Sum_probs=31.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
+++|.|+|+ |.+|+=++.+-.+-|+++++++-++..
T Consensus 1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 478999999 999999999999999999999876554
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.51 E-value=0.017 Score=42.82 Aligned_cols=82 Identities=17% Similarity=0.082 Sum_probs=53.8
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCC--CChhHHHHHhccccEEE
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNP--RDDNTIKATMAKANVVI 81 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl--~~~~~~~~~~~~~d~vi 81 (327)
+...++++|+|-|.-+|+.++..|+++|..|+....+......... ...-......|+ ...+.+.+....+|+||
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvI 102 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGE---SLKLNKHHVEDLGEYSEDLLKKCSLDSDVVI 102 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCC---CSSCCCCEEEEEEECCHHHHHHHHHHCSEEE
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccccccccc---ceeeeeeccccccccchhHHhhccccCCEEE
Confidence 4567999999999999999999999999999877644211100000 000011112222 24567888888899999
Q ss_pred Ecccccc
Q 047628 82 NLIGREY 88 (327)
Q Consensus 82 ~~a~~~~ 88 (327)
..+|...
T Consensus 103 savG~p~ 109 (171)
T d1edza1 103 TGVPSEN 109 (171)
T ss_dssp ECCCCTT
T ss_pred EccCCCc
Confidence 8887643
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.47 E-value=0.0099 Score=41.76 Aligned_cols=36 Identities=17% Similarity=0.043 Sum_probs=32.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |+||-.++..|.+.|.+|+++.|.+.-
T Consensus 26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~i 61 (125)
T d1ojta2 26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGL 61 (125)
T ss_dssp CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence 478999999 999999999999999999999887643
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.38 E-value=0.095 Score=36.30 Aligned_cols=78 Identities=10% Similarity=0.103 Sum_probs=54.4
Q ss_pred CCcccCCcEEEEEcCCC----------ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHH
Q 047628 1 MTYVYSGIIATVFGTTG----------FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTI 70 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG----------~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~ 70 (327)
|+.....++|||+|+.. +.+.+.+++|.+.|++++.+.-+++........ ..-+...-...+.+
T Consensus 1 mp~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~------aD~lYfePlt~e~v 74 (127)
T d1a9xa3 1 MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM------ADATYIEPIHWEVV 74 (127)
T ss_dssp CCCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG------SSEEECSCCCHHHH
T ss_pred CCCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh------cceeeeecCCHHHH
Confidence 55545568999999954 467899999999999999999988764322211 12223344567888
Q ss_pred HHHhc--cccEEEEcc
Q 047628 71 KATMA--KANVVINLI 84 (327)
Q Consensus 71 ~~~~~--~~d~vi~~a 84 (327)
.+.++ ..|.|+-..
T Consensus 75 ~~Ii~~E~pd~il~~~ 90 (127)
T d1a9xa3 75 RKIIEKERPDAVLPTM 90 (127)
T ss_dssp HHHHHHHCCSEEECSS
T ss_pred HHHHHHhCcCCeEEEe
Confidence 88775 589888544
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.34 E-value=0.04 Score=40.63 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=33.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
...++|+|+|-+..+|+.++..|+++|..|+........
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~ 75 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAH 75 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSS
T ss_pred cccceEEEEecCCccchHHHHHHHhccCceEEEeccccc
Confidence 457899999999999999999999999999988765443
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.30 E-value=0.00035 Score=53.03 Aligned_cols=39 Identities=23% Similarity=0.304 Sum_probs=32.3
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCch
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDP 45 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~ 45 (327)
.+.++|+|+|+ |..++.++.+|.+.| +|+++.|+.++..
T Consensus 16 ~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~ 54 (177)
T d1nvta1 16 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAE 54 (177)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHH
Confidence 45789999999 667999999987766 9999999876643
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.28 E-value=0.019 Score=43.44 Aligned_cols=70 Identities=14% Similarity=0.086 Sum_probs=49.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
...+++.|+|. |.||+.+++.|..-|.+|...+|........ ... .+ ....++.++++.+|+|+-+.
T Consensus 42 l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~----~~-------~~~~~l~~~l~~sD~v~~~~ 108 (188)
T d2naca1 42 LEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVE-KEL----NL-------TWHATREDMYPVCDVVTLNC 108 (188)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHH-HHH----TC-------EECSSHHHHGGGCSEEEECS
T ss_pred ccccceeeccc-cccchhhhhhhhccCceEEEEeecccccccc-ccc----cc-------cccCCHHHHHHhccchhhcc
Confidence 34678999997 9999999999998899999999876543211 110 01 12345667788889887665
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
..+
T Consensus 109 plt 111 (188)
T d2naca1 109 PLH 111 (188)
T ss_dssp CCC
T ss_pred ccc
Confidence 443
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=95.25 E-value=0.01 Score=41.56 Aligned_cols=37 Identities=24% Similarity=0.249 Sum_probs=33.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDD 44 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~ 44 (327)
.++++|+|| |+||-.++..|.+.|.+|+++.|++.-.
T Consensus 25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~l 61 (123)
T d1dxla2 25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEIV 61 (123)
T ss_dssp CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSSS
T ss_pred CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccccC
Confidence 478999999 9999999999999999999999987553
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.14 E-value=0.034 Score=47.69 Aligned_cols=77 Identities=21% Similarity=0.129 Sum_probs=48.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchh----------------------hhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPR----------------------HLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~----------------------~~~~~~~~~~v~~~~~ 62 (327)
.++||||+|+ |-+|..+++.|...|. ++.+++.+.-.... .+.......++..+..
T Consensus 36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~np~v~i~~~~~ 114 (426)
T d1yovb1 36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFN 114 (426)
T ss_dssp HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHSTTCCCEEECS
T ss_pred hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhhCCCCceEeeec
Confidence 3568999999 5599999999999996 68887765422110 0111111123444454
Q ss_pred CCCChhHHHHHhccccEEEEccc
Q 047628 63 NPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 63 Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
++.+.. .+.++++|+||.+..
T Consensus 115 ~i~~~~--~~~~~~~DlVi~~~D 135 (426)
T d1yovb1 115 KIQDFN--DTFYRQFHIIVCGLD 135 (426)
T ss_dssp CGGGBC--HHHHTTCSEEEECCS
T ss_pred cccchH--HHHHHhcchheeccC
Confidence 444322 356788999998764
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=95.12 E-value=0.018 Score=42.92 Aligned_cols=76 Identities=17% Similarity=0.189 Sum_probs=47.4
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEE-eeCCCC-hhHHHHHh--ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPM-KFNPRD-DNTIKATM--AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~-~~Dl~~-~~~~~~~~--~~~d~vi 81 (327)
..+|+|.|++ -+|...+..+...| ..|+++++++++.. ...+.+. ...+ ..|-.+ .+...+.. .++|++|
T Consensus 29 GdtVlV~GaG-G~G~~~~~~~~~~g~~~Vi~~~~~~~k~~-~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~D~vi 103 (176)
T d2jhfa2 29 GSTCAVFGLG-GVGLSVIMGCKAAGAARIIGVDINKDKFA-KAKEVGA---TECVNPQDYKKPIQEVLTEMSNGGVDFSF 103 (176)
T ss_dssp TCEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCEEEEECCC-CcHHHHHHHHHHcCCceEEeecCcHHHHH-HHHHhCC---eeEEecCCchhHHHHHHHHHhcCCCCEEE
Confidence 4689999995 58988888888887 58999998887743 2333321 1111 122212 22222222 3589999
Q ss_pred Eccccc
Q 047628 82 NLIGRE 87 (327)
Q Consensus 82 ~~a~~~ 87 (327)
.+.|..
T Consensus 104 d~~G~~ 109 (176)
T d2jhfa2 104 EVIGRL 109 (176)
T ss_dssp ECSCCH
T ss_pred ecCCch
Confidence 998753
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=95.06 E-value=0.012 Score=48.59 Aligned_cols=35 Identities=29% Similarity=0.338 Sum_probs=32.0
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
+++|+|+|| |+-|...+..|.+.|++|.++-++..
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 589999999 99999999999999999999987764
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.04 E-value=0.016 Score=40.20 Aligned_cols=36 Identities=14% Similarity=0.016 Sum_probs=32.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|..++..|.+.|.+|.++.|.+.-
T Consensus 22 ~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~ 57 (121)
T d1mo9a2 22 GSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPL 57 (121)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchh
Confidence 478999999 999999999999999999999987643
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.02 E-value=0.19 Score=34.29 Aligned_cols=71 Identities=14% Similarity=0.057 Sum_probs=49.0
Q ss_pred CcEEEEEcCCC----------ccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc-
Q 047628 7 GIIATVFGTTG----------FLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA- 75 (327)
Q Consensus 7 ~~~ilI~GatG----------~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~- 75 (327)
.++|||+|+.. +.+.+.+++|.+.|++++.+.-+|+....... -..-+...-...+.+.+.++
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d------~aD~lYfeplt~e~v~~Ii~~ 77 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD------TSDRLYFEPVTLEDVLEIVRI 77 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT------SSSEEECCCCSHHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh------hcCceEEccCCHHHHHHHHHH
Confidence 57899999955 56789999999999999999998876432211 11222333346677777664
Q ss_pred -cccEEEEc
Q 047628 76 -KANVVINL 83 (327)
Q Consensus 76 -~~d~vi~~ 83 (327)
..|.|+-.
T Consensus 78 E~p~~ii~~ 86 (121)
T d1a9xa4 78 EKPKGVIVQ 86 (121)
T ss_dssp HCCSEEECS
T ss_pred hCCCEEEee
Confidence 57888744
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=95.00 E-value=0.0043 Score=46.10 Aligned_cols=73 Identities=12% Similarity=-0.007 Sum_probs=44.1
Q ss_pred CcEEEEEcCCCccHHH-HHHHHHhC-----CCEEEEeeCCCCCchhhh---c----ccCCCCCeeEEeeCCCChhHHHHH
Q 047628 7 GIIATVFGTTGFLGRY-VVQQLAKM-----GSQVLVPFRGCEDDPRHL---K----LMGDLGQIVPMKFNPRDDNTIKAT 73 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~-l~~~Ll~~-----g~~V~~~~R~~~~~~~~~---~----~~~~~~~v~~~~~Dl~~~~~~~~~ 73 (327)
..||.|+|| |.+|.. ++..|+.. +.++++++.++++..... . ..+ ...+.... .+..++
T Consensus 3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~d~~ea 74 (167)
T d1u8xx1 3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKA--PDIEFAAT-----TDPEEA 74 (167)
T ss_dssp CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHC--TTSEEEEE-----SCHHHH
T ss_pred CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhC--CCcceEec-----CChhhc
Confidence 578999999 445654 44555543 248999998876543111 1 011 11222211 245678
Q ss_pred hccccEEEEccccc
Q 047628 74 MAKANVVINLIGRE 87 (327)
Q Consensus 74 ~~~~d~vi~~a~~~ 87 (327)
++++|+||.+++..
T Consensus 75 l~~AD~Vvitag~~ 88 (167)
T d1u8xx1 75 FTDVDFVMAHIRVG 88 (167)
T ss_dssp HSSCSEEEECCCTT
T ss_pred cCCCCEEEECCCcC
Confidence 89999999999874
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.74 E-value=0.02 Score=42.91 Aligned_cols=37 Identities=24% Similarity=0.082 Sum_probs=33.1
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
+.++|+|+|| |..|-..+..|.++||+|+++.+.+.-
T Consensus 42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~ 78 (179)
T d1ps9a3 42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI 78 (179)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence 3589999999 999999999999999999999887543
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.68 E-value=0.012 Score=42.66 Aligned_cols=37 Identities=14% Similarity=0.134 Sum_probs=32.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
+..++|||+|| |.+|..-++.|++.|.+|++++....
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~~~ 47 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPDLH 47 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEEEC
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 45789999999 99999999999999999999975433
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=94.67 E-value=0.062 Score=39.00 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=28.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchh
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPR 46 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~ 46 (327)
||.++|- |..|.++++.|++.|+.+ ...|+.++...
T Consensus 2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~ 37 (156)
T d2cvza2 2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALR 37 (156)
T ss_dssp CEEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHH
T ss_pred eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHH
Confidence 5888998 999999999999998866 56777655433
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=94.49 E-value=0.018 Score=41.64 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=28.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGC 41 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~ 41 (327)
|++|.|+|+||-||...+.-+.+. .++|.+++-+.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 478999999999999999877765 47888886543
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.47 E-value=0.015 Score=43.83 Aligned_cols=35 Identities=14% Similarity=0.139 Sum_probs=31.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCE 42 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~ 42 (327)
.+||+|+|| |..|...+..|.+.|+ +|+++.|++.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 478999999 9999999999999998 5999988654
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=94.45 E-value=0.054 Score=39.67 Aligned_cols=67 Identities=12% Similarity=0.016 Sum_probs=39.3
Q ss_pred CcEEEEEcCCCccHHH-HHHHHHhC-CCEEEEee-CCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRY-VVQQLAKM-GSQVLVPF-RGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~-l~~~Ll~~-g~~V~~~~-R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
+++|.|+|. |.+|+. .+..|... +.++.++. ++.++........+ +.+ .++ +.++++++|+|+-+
T Consensus 1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~----~~~----~~~---~~~l~~~~D~V~I~ 68 (164)
T d1tlta1 1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWR----IPY----ADS---LSSLAASCDAVFVH 68 (164)
T ss_dssp CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHT----CCB----CSS---HHHHHTTCSEEEEC
T ss_pred CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhccc----ccc----ccc---chhhhhhccccccc
Confidence 378999996 899975 45666554 67877664 55544332222211 221 123 34445789999866
Q ss_pred cc
Q 047628 84 IG 85 (327)
Q Consensus 84 a~ 85 (327)
..
T Consensus 69 tp 70 (164)
T d1tlta1 69 SS 70 (164)
T ss_dssp SC
T ss_pred cc
Confidence 54
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=94.45 E-value=0.013 Score=47.27 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=31.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
|+|+|+|| |.-|...+..|.++|++|+++-+++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 67999999 99999999999999999999987643
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.30 E-value=0.038 Score=41.90 Aligned_cols=74 Identities=22% Similarity=0.213 Sum_probs=46.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCCh---hHHHHHhc--cccEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDD---NTIKATMA--KANVV 80 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~---~~~~~~~~--~~d~v 80 (327)
..+|||+|+ |-+|...+..+...|. .|+++++++++. ......+ ...+ .|..+. +.+.+... ++|++
T Consensus 26 G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl-~~a~~~G----a~~~-~~~~~~~~~~~i~~~t~g~g~D~v 98 (195)
T d1kola2 26 GSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL-AHAKAQG----FEIA-DLSLDTPLHEQIAALLGEPEVDCA 98 (195)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTT----CEEE-ETTSSSCHHHHHHHHHSSSCEEEE
T ss_pred CCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhh-Hhhhhcc----ccEE-EeCCCcCHHHHHHHHhCCCCcEEE
Confidence 568999987 8999887777766665 788888876553 2233333 2222 222222 33444443 48999
Q ss_pred EEccccc
Q 047628 81 INLIGRE 87 (327)
Q Consensus 81 i~~a~~~ 87 (327)
|.+.|..
T Consensus 99 id~vG~~ 105 (195)
T d1kola2 99 VDAVGFE 105 (195)
T ss_dssp EECCCTT
T ss_pred EECcccc
Confidence 9998853
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.25 E-value=0.16 Score=37.30 Aligned_cols=108 Identities=7% Similarity=-0.099 Sum_probs=57.2
Q ss_pred CcEEEEEcCC-CccHHHHHHHHHhCC----CEEEEeeCCCCCchhh-h--------cccCCCCCeeEEeeCCCChhHHHH
Q 047628 7 GIIATVFGTT-GFLGRYVVQQLAKMG----SQVLVPFRGCEDDPRH-L--------KLMGDLGQIVPMKFNPRDDNTIKA 72 (327)
Q Consensus 7 ~~~ilI~Gat-G~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~-~--------~~~~~~~~v~~~~~Dl~~~~~~~~ 72 (327)
+|||.|+||. .+.+..++..++... .++.+++.+++..... + ...+ .+..... ..+..+
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~--~~~~~~~-----~td~~~ 73 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAG--VPIEIHL-----TLDRRR 73 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTT--CCCEEEE-----ESCHHH
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcC--CCceeee-----cCCchh
Confidence 3789999983 233344545444432 4888888876432111 1 0111 1122211 123356
Q ss_pred HhccccEEEEccccccccCc--c--------------------hhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 73 TMAKANVVINLIGREYETRN--Y--------------------SFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 73 ~~~~~d~vi~~a~~~~~~~~--~--------------------~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
+++++|+||.+++....... . .....|+.....+++.+++.. ...++..
T Consensus 74 al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~-pda~~i~ 144 (169)
T d1s6ya1 74 ALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLIN 144 (169)
T ss_dssp HHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEE
T ss_pred hcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC-CCeEEEE
Confidence 78899999999987432100 0 011235666677777777776 3444433
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=94.21 E-value=0.093 Score=38.54 Aligned_cols=97 Identities=22% Similarity=0.153 Sum_probs=57.8
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcc------cCCCC-------------CeeEEeeCCCChh
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKL------MGDLG-------------QIVPMKFNPRDDN 68 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~------~~~~~-------------~v~~~~~Dl~~~~ 68 (327)
|||.|=|- |.||+.+.|.|.+++.+|.++.-. ......... .+.++ +-.+....-.+++
T Consensus 1 ikigINGf-GRIGR~~~R~l~~~~i~iv~INd~-~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~ 78 (168)
T d2g82a1 1 MKVGINGF-GRIGRQVFRILHSRGVEVALINDL-TDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPK 78 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECS-SCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGG
T ss_pred CEEEEECC-cHHHHHHHHHHhcCCCEEEEECCC-cchhhhhheeecccccCccccccccccceeEecceeEEEEecCChH
Confidence 58899888 999999999999999999887643 221111100 01110 0111112223566
Q ss_pred HHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEE
Q 047628 69 TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQ 121 (327)
Q Consensus 69 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~ 121 (327)
++.-.-.++|+|+-|.|.... ...++.-.+.| ++++|.
T Consensus 79 ~i~W~~~gvdiViEcTG~f~~--------------~~~~~~hl~~g-akkVii 116 (168)
T d2g82a1 79 EIPWAEAGVGVVIESTGVFTD--------------ADKAKAHLEGG-AKKVII 116 (168)
T ss_dssp GCCTGGGTEEEEEECSSSCCB--------------HHHHTHHHHTT-CSEEEE
T ss_pred HCcccccCCceeEeccccccc--------------hHHhhhhhccc-cceeee
Confidence 665545679999999987532 12223333457 888886
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=94.19 E-value=0.0065 Score=41.44 Aligned_cols=38 Identities=13% Similarity=0.094 Sum_probs=30.7
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
...++|+|+|+ |.-|..++..|.+...+++.+.|++..
T Consensus 30 f~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~~~ 67 (107)
T d2gv8a2 30 FVGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLGGG 67 (107)
T ss_dssp GTTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred cCCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecCcc
Confidence 45689999999 899999999998887776666666543
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=94.19 E-value=0.018 Score=46.14 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=29.9
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
-|+|+|| |.+|..++.+|.++|++|.++.|..
T Consensus 6 DvvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4999999 9999999999999999999999865
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.16 E-value=0.076 Score=39.63 Aligned_cols=35 Identities=20% Similarity=0.172 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEe-eCCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVP-FRGCED 43 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~-~R~~~~ 43 (327)
+||.|+|. |.+|+..++.|... +.+|+++ +++.++
T Consensus 2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~ 38 (184)
T d1ydwa1 2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEK 38 (184)
T ss_dssp EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHH
T ss_pred eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccc
Confidence 68999996 88999999988775 5788866 555443
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=94.08 E-value=0.038 Score=40.93 Aligned_cols=75 Identities=17% Similarity=0.197 Sum_probs=44.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEee-CC-CChhHHHHHh--ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKF-NP-RDDNTIKATM--AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~-Dl-~~~~~~~~~~--~~~d~vi 81 (327)
..+|+|.|+ |-+|...++.+...|. .|++.++++++ .+..++.+. -..+.. +- .+.....+.. .++|+||
T Consensus 29 G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k-~~~ak~lGa---~~~i~~~~~~~~~~~~~~~~~~~g~D~vi 103 (176)
T d2fzwa2 29 GSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDK-FARAKEFGA---TECINPQDFSKPIQEVLIEMTDGGVDYSF 103 (176)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGG-HHHHHHHTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEE
T ss_pred CCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHH-HHHHHHhCC---cEEEeCCchhhHHHHHHHHHcCCCCcEee
Confidence 468999998 4589998888888885 57777666555 333444441 122211 11 1122222222 3589999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
.+.|.
T Consensus 104 d~~G~ 108 (176)
T d2fzwa2 104 ECIGN 108 (176)
T ss_dssp ECSCC
T ss_pred ecCCC
Confidence 99875
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.02 E-value=0.026 Score=41.25 Aligned_cols=69 Identities=19% Similarity=0.249 Sum_probs=49.6
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++++|+|= |.||+.+++.|...|.+|.+...+|-...+... ... ....+.+++..+|++|-+.
T Consensus 22 l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~~-----dG~--------~v~~~~~a~~~adivvtaT 87 (163)
T d1li4a1 22 IAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPINALQAAM-----EGY--------EVTTMDEACQEGNIFVTTT 87 (163)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-----TTC--------EECCHHHHTTTCSEEEECS
T ss_pred ecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccchhHHhhc-----Cce--------EeeehhhhhhhccEEEecC
Confidence 44678888876 999999999999999999999887644322111 011 1224667788899999887
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
|..
T Consensus 88 Gn~ 90 (163)
T d1li4a1 88 GCI 90 (163)
T ss_dssp SCS
T ss_pred CCc
Confidence 753
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.97 E-value=0.041 Score=42.92 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=32.5
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
..++|+|+|| |..|...+..|.++|++|+++.+++.
T Consensus 48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 4589999999 99999999999999999999987654
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=93.97 E-value=0.046 Score=40.68 Aligned_cols=76 Identities=17% Similarity=0.192 Sum_probs=50.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEE-eeCCCC-hhHHHHHh--ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPM-KFNPRD-DNTIKATM--AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~-~~Dl~~-~~~~~~~~--~~~d~vi 81 (327)
..+|+|+|+ |-+|...+..+...| .+|+++++++++.. ..++++. -..+ .-|-.+ .+.+.+.. .++|++|
T Consensus 30 g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~-~Ak~~GA---~~~in~~~~~~~~~~~~~~~~g~G~d~vi 104 (176)
T d1d1ta2 30 GSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFE-KAMAVGA---TECISPKDSTKPISEVLSEMTGNNVGYTF 104 (176)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH-HHHHHTC---SEEECGGGCSSCHHHHHHHHHTSCCCEEE
T ss_pred CCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHH-HHHhcCC---cEEECccccchHHHHHHHHhccccceEEE
Confidence 468999987 999999999999998 58999999888743 3333331 1122 112222 23334433 4689999
Q ss_pred Eccccc
Q 047628 82 NLIGRE 87 (327)
Q Consensus 82 ~~a~~~ 87 (327)
.+.+..
T Consensus 105 ~~~g~~ 110 (176)
T d1d1ta2 105 EVIGHL 110 (176)
T ss_dssp ECSCCH
T ss_pred EeCCch
Confidence 998753
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.90 E-value=0.018 Score=46.57 Aligned_cols=34 Identities=24% Similarity=0.239 Sum_probs=31.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
+.+|+|+|| |..|..++..|.+.|++|.++.|.+
T Consensus 2 k~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~ 35 (292)
T d1k0ia1 2 KTQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT 35 (292)
T ss_dssp BCSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 357999999 9999999999999999999998875
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=93.84 E-value=0.03 Score=40.41 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGC 41 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~ 41 (327)
+++|.|+|+||-||...+.-+.+. .++|.+++-+.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 479999999999999998877664 48888886553
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=93.75 E-value=0.045 Score=40.61 Aligned_cols=76 Identities=16% Similarity=0.176 Sum_probs=48.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCC--hhHHHHHh--ccccEE
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRD--DNTIKATM--AKANVV 80 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~--~~~~~~~~--~~~d~v 80 (327)
...+|+|+|+ |-+|...+..+...|. +|+++++++++.. ..++.+. ...+...-.| .+...+.. .++|+|
T Consensus 27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~-~a~~lGa---~~~i~~~~~d~~~~~~~~~~~~~G~d~v 101 (174)
T d1p0fa2 27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP-KAIELGA---TECLNPKDYDKPIYEVICEKTNGGVDYA 101 (174)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH-HHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEE
T ss_pred CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHH-HHHHcCC---cEEEcCCCchhHHHHHHHHhcCCCCcEE
Confidence 3568999997 8899999999888885 7999988877643 2333331 1222111111 12233333 358999
Q ss_pred EEcccc
Q 047628 81 INLIGR 86 (327)
Q Consensus 81 i~~a~~ 86 (327)
|.+++.
T Consensus 102 id~~g~ 107 (174)
T d1p0fa2 102 VECAGR 107 (174)
T ss_dssp EECSCC
T ss_pred EEcCCC
Confidence 999875
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.61 E-value=0.034 Score=44.83 Aligned_cols=33 Identities=24% Similarity=0.147 Sum_probs=30.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
|||+|+|| |.-|...+..|.+.|++|.++.+++
T Consensus 2 KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 2 KRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 78999999 9999999999999999999998764
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=93.52 E-value=0.085 Score=39.60 Aligned_cols=33 Identities=30% Similarity=0.378 Sum_probs=25.9
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCC-----CEEEEeeC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMG-----SQVLVPFR 39 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g-----~~V~~~~R 39 (327)
|+|||.|=|- |.||+.+.|.+++++ .+|.++.-
T Consensus 1 M~ikigINGF-GRIGR~vlR~~~~~~~~~~~i~iv~Ind 38 (190)
T d1k3ta1 1 MPIKVGINGF-GRIGRMVFQALCEDGLLGTEIDVVAVVD 38 (190)
T ss_dssp CCEEEEEECC-SHHHHHHHHHHHHTTCBTTTEEEEEEEE
T ss_pred CCeEEEEECC-ChHHHHHHHHHHHcCCCCCCeEEEEEec
Confidence 3579999997 999999999998864 35666543
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.52 E-value=0.027 Score=45.94 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=31.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
|..|+|+|| |..|..+++.|.+.|++|.++-+++.
T Consensus 1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 357999999 99999999999999999999987654
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=93.48 E-value=0.045 Score=40.23 Aligned_cols=70 Identities=10% Similarity=0.037 Sum_probs=38.3
Q ss_pred CcEEEEEcCCCccHHH-HHHHHHhC-CCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRY-VVQQLAKM-GSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~-l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
++||.|+|+ |.+|+. .+..|.+. +.++.+++++++.........+ +..+.. +.+++-+ .++|+|+-+.
T Consensus 1 tirvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~----~~~~~~---~~~~ll~--~~iD~V~I~t 70 (167)
T d1xeaa1 1 SLKIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR----VSATCT---DYRDVLQ--YGVDAVMIHA 70 (167)
T ss_dssp CEEEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT----CCCCCS---STTGGGG--GCCSEEEECS
T ss_pred CeEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc----cccccc---cHHHhcc--cccceecccc
Confidence 378999998 778865 45555554 4677777666544332222221 211222 2232221 3689988665
Q ss_pred cc
Q 047628 85 GR 86 (327)
Q Consensus 85 ~~ 86 (327)
..
T Consensus 71 p~ 72 (167)
T d1xeaa1 71 AT 72 (167)
T ss_dssp CG
T ss_pred cc
Confidence 43
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.45 E-value=0.034 Score=42.51 Aligned_cols=31 Identities=19% Similarity=0.342 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR 39 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R 39 (327)
|||+++|.+. .|..+++.|++.|++|.++.-
T Consensus 1 Mkiv~~~~~~-~g~~~l~~L~~~g~~I~~Vvt 31 (203)
T d2blna2 1 MKTVVFAYHD-MGCLGIEALLAAGYEISAIFT 31 (203)
T ss_dssp CEEEEEECHH-HHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEecCH-HHHHHHHHHHHCCCCEEEEEc
Confidence 6899997755 699999999999999977653
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.44 E-value=0.035 Score=42.04 Aligned_cols=34 Identities=18% Similarity=0.214 Sum_probs=29.2
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCE 42 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~ 42 (327)
|||+|+|| |++|-.++..|.+. +.+|+++.|.+.
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~~ 36 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGDF 36 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCCc
Confidence 78999999 99999999999875 568999887653
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.44 E-value=0.04 Score=45.08 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=32.2
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
..++|+|+|| |..|...+..|.++|++|.++.+++.
T Consensus 29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 3579999999 99999999999999999999987653
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=93.43 E-value=0.042 Score=45.40 Aligned_cols=35 Identities=20% Similarity=0.079 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGCE 42 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~~ 42 (327)
+++|+|+|| |.-|...+..|+++| ++|+++-|+..
T Consensus 4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 578999999 999999999999876 69999988754
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=93.43 E-value=0.038 Score=40.79 Aligned_cols=34 Identities=18% Similarity=0.113 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC--CEEEEeeCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG--SQVLVPFRGC 41 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g--~~V~~~~R~~ 41 (327)
.+||+|+|| |++|-.++..|.+.+ .+|+++.+.+
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 479999999 999999999999877 4788887765
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=93.38 E-value=0.055 Score=39.98 Aligned_cols=75 Identities=20% Similarity=0.223 Sum_probs=46.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh--ccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM--AKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~--~~~d~vi~~ 83 (327)
..+|+|.|+ |.+|...+..+...| ..|+++++++++. ...+..+ -.+++..+-.+.+.+.+.. +++|+||.+
T Consensus 33 g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~-~~~~~~g---a~~~i~~~~~~~~~~~~~~~~~g~d~vid~ 107 (172)
T d1h2ba2 33 GAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL-KLAERLG---ADHVVDARRDPVKQVMELTRGRGVNVAMDF 107 (172)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH-HHHHHTT---CSEEEETTSCHHHHHHHHTTTCCEEEEEES
T ss_pred CCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHH-HHHhhcc---cceeecCcccHHHHHHHhhCCCCceEEEEe
Confidence 468999887 999999888887777 4677777776542 3333333 1233332211223333333 248999999
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
+|.
T Consensus 108 ~g~ 110 (172)
T d1h2ba2 108 VGS 110 (172)
T ss_dssp SCC
T ss_pred cCc
Confidence 985
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=93.35 E-value=0.28 Score=35.67 Aligned_cols=100 Identities=17% Similarity=0.137 Sum_probs=57.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcc------cCCCC-Ce------------eEEeeCCCCh
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKL------MGDLG-QI------------VPMKFNPRDD 67 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~------~~~~~-~v------------~~~~~Dl~~~ 67 (327)
+||.|-|- |.||+.++|.++++. .+|.++.-.. ........ .+.++ .+ ++....-.++
T Consensus 2 ikigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~-~~~~~ayLl~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p 79 (166)
T d1gado1 2 IKVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLL-DADYMAYMLKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP 79 (166)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSS-CHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred eEEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCC-CHHHHhhhheecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh
Confidence 68999886 999999999999874 6777776432 21111100 01111 11 1111122356
Q ss_pred hHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEecc
Q 047628 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCL 125 (327)
Q Consensus 68 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~ 125 (327)
+++.-.-.++|+|+.|.|.... ..-++.-.+.| ++++|. |..
T Consensus 80 ~~i~W~~~gvDiViEcTG~f~t--------------~~~~~~hl~~g-akkVii-SaP 121 (166)
T d1gado1 80 ANLKWDEVGVDVVAEATGLFLT--------------DETARKHITAG-AKKVVM-TGP 121 (166)
T ss_dssp GGGCHHHHTCSEEEECSSSCCS--------------HHHHTHHHHTT-CSEEEE-SSC
T ss_pred HHCCccccCCCEEEEccccccC--------------HHHHHHHhcCC-CceEEe-ecc
Confidence 6654434579999999997532 11222333457 888774 543
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.35 E-value=0.059 Score=39.04 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=29.6
Q ss_pred cEEEEE-cCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 8 IIATVF-GTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 8 ~~ilI~-GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
+.++|+ .++||+|..++..|.+.|.+|+++.+.+.-
T Consensus 40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~ 76 (156)
T d1djqa2 40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA 76 (156)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence 456665 244999999999999999999999997644
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=93.17 E-value=0.081 Score=39.16 Aligned_cols=75 Identities=15% Similarity=0.184 Sum_probs=47.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchhhhcccCCCCCeeEEeeCCC--ChhHHHHHh--ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPR--DDNTIKATM--AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~--~~~~~~~~~--~~~d~vi 81 (327)
..+|+|+|+ |-+|...+..+...|. .|++.++++++. ...+.++. ...+...-. ....+.+.. .++|+||
T Consensus 29 G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~d~vi 103 (174)
T d1e3ia2 29 GSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKALGA---TDCLNPRELDKPVQDVITELTAGGVDYSL 103 (174)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTC---SEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH-HHHHHhCC---CcccCCccchhhhhhhHhhhhcCCCcEEE
Confidence 468999987 9999999999999996 687888877663 33333431 122221111 122223222 4589999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
.|+|.
T Consensus 104 e~~G~ 108 (174)
T d1e3ia2 104 DCAGT 108 (174)
T ss_dssp ESSCC
T ss_pred Eeccc
Confidence 99985
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.10 E-value=0.06 Score=47.49 Aligned_cols=103 Identities=10% Similarity=0.035 Sum_probs=62.3
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCCchh----------------------hhcccCCCCCeeEEee
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCEDDPR----------------------HLKLMGDLGQIVPMKF 62 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~----------------------~~~~~~~~~~v~~~~~ 62 (327)
.+.+|+|+|+ |-+|..+++.|.-.|. ++++++.+.-.... .+.++....+++.+..
T Consensus 24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp~v~i~~~~~ 102 (529)
T d1yova1 24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE 102 (529)
T ss_dssp HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCTTSBCCEESS
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHhCCCCcEEEEcC
Confidence 4579999998 6699999999999995 68887654322110 0111221112333333
Q ss_pred CCCChhHH----HHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCC
Q 047628 63 NPRDDNTI----KATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGA 127 (327)
Q Consensus 63 Dl~~~~~~----~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v 127 (327)
+ ++++ .+.+.++|+||.+... ......+-++|++.+ + .+|..++.|.
T Consensus 103 ~---~~~~~~~~~~~~~~~dvVv~~~~~-------------~~~~~~l~~~c~~~~-i-p~i~~~~~G~ 153 (529)
T d1yova1 103 S---PENLLDNDPSFFCRFTVVVATQLP-------------ESTSLRLADVLWNSQ-I-PLLICRTYGL 153 (529)
T ss_dssp C---HHHHHHSCGGGGGGCSEEEEESCC-------------HHHHHHHHHHHHHHT-C-CEEEEEEETT
T ss_pred C---chhhhhhHHHHhcCCCEEEECCCC-------------HHHHHHHHHHHHHcC-C-CEEEEeccCC
Confidence 2 3332 2346678999976432 234456888898887 5 5777777554
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=93.02 E-value=0.21 Score=40.01 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=31.3
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
++..++|+|-|- |.+|+++++.|.+.|.+|++++-+
T Consensus 33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence 455689999998 999999999999999999988643
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.95 E-value=0.0072 Score=47.43 Aligned_cols=26 Identities=19% Similarity=0.268 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEE
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQV 34 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V 34 (327)
|||+|+|| |.+|...+.+|+++|++|
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTT
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCc
Confidence 68999999 999999999999999753
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=92.91 E-value=0.042 Score=40.82 Aligned_cols=34 Identities=24% Similarity=0.211 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
+++|+|+|| |++|-.++..|.+.|.+|.++.+.+
T Consensus 3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence 578999999 9999999999999998766655444
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=92.90 E-value=0.13 Score=38.12 Aligned_cols=70 Identities=13% Similarity=0.165 Sum_probs=39.0
Q ss_pred cCCcEEEEEcCCCccHHHH-HHHHHhCC--CEEEEe-eCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--ccc
Q 047628 5 YSGIIATVFGTTGFLGRYV-VQQLAKMG--SQVLVP-FRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KAN 78 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l-~~~Ll~~g--~~V~~~-~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d 78 (327)
|++++|.|+|. |.+|+.+ +..+.+.+ .++.++ +|++++........+ ...+. +++.++++ ++|
T Consensus 1 MkkirigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~----~~~~~------~~~~ell~~~~id 69 (181)
T d1zh8a1 1 LRKIRLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVG----NPAVF------DSYEELLESGLVD 69 (181)
T ss_dssp CCCEEEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHS----SCEEE------SCHHHHHHSSCCS
T ss_pred CCCcEEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccc----cccee------eeeeccccccccc
Confidence 45679999996 8999864 66666543 577765 444433222111111 11111 23444554 489
Q ss_pred EEEEccc
Q 047628 79 VVINLIG 85 (327)
Q Consensus 79 ~vi~~a~ 85 (327)
+|+-+..
T Consensus 70 ~v~I~tp 76 (181)
T d1zh8a1 70 AVDLTLP 76 (181)
T ss_dssp EEEECCC
T ss_pred eeecccc
Confidence 9986654
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=92.77 E-value=0.0069 Score=44.78 Aligned_cols=74 Identities=14% Similarity=0.005 Sum_probs=42.9
Q ss_pred cEEEEEcCCCccHHHHHH-HHHhC-----CCEEEEeeCCCCCchhhhc--ccCCCCCeeEEeeCCCChhHHHHHhccccE
Q 047628 8 IIATVFGTTGFLGRYVVQ-QLAKM-----GSQVLVPFRGCEDDPRHLK--LMGDLGQIVPMKFNPRDDNTIKATMAKANV 79 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~-~Ll~~-----g~~V~~~~R~~~~~~~~~~--~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~ 79 (327)
|||.|+|| |.+|...+- .|+.. ..++.+++.++++...... ............ + ....+.++++|+
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~---t--~~~~~~l~~aDv 74 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLI---S--DTFEGAVVDAKY 74 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEE---C--SSHHHHHTTCSE
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEE---e--cCcccccCCCCE
Confidence 68999999 557766663 33321 3689999988765331110 000001122211 1 123567889999
Q ss_pred EEEccccc
Q 047628 80 VINLIGRE 87 (327)
Q Consensus 80 vi~~a~~~ 87 (327)
||..++..
T Consensus 75 VVita~~~ 82 (162)
T d1up7a1 75 VIFQFRPG 82 (162)
T ss_dssp EEECCCTT
T ss_pred EEEecccC
Confidence 99999874
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=92.77 E-value=0.074 Score=37.64 Aligned_cols=107 Identities=11% Similarity=-0.060 Sum_probs=64.2
Q ss_pred CCcEEEEEcCC---CccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEE
Q 047628 6 SGIIATVFGTT---GFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVIN 82 (327)
Q Consensus 6 ~~~~ilI~Gat---G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~ 82 (327)
..++|.|+|+| +..|..+++.|++.||+++.+.-++.... +. +...+ .++.++-..+|.|+-
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~--i~------g~~~~-------~~l~~i~~~iD~v~v 76 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEE--LF------GEEAV-------ASLLDLKEPVDILDV 76 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSE--ET------TEECB-------SSGGGCCSCCSEEEE
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccce--ee------ceecc-------cchhhccCCCceEEE
Confidence 35789999998 66889999999999999988754332110 00 11111 112222235788887
Q ss_pred ccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCCCCCCchHHHhHHHHHHHHHhhCCCeE
Q 047628 83 LIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGASSSSPSRVFSTKAAAEEAVLRELPWAT 154 (327)
Q Consensus 83 ~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~~~~~~~y~~~K~~~E~~~~~~~~~~~ 154 (327)
+... .....+++.|.+.| ++.+++-++ +.+ ..+.+.+++.+++++
T Consensus 77 ~~p~--------------~~v~~~v~~~~~~g-~k~i~~q~G--~~~----------~e~~~~a~~~Gi~vV 121 (136)
T d1iuka_ 77 FRPP--------------SALMDHLPEVLALR-PGLVWLQSG--IRH----------PEFEKALKEAGIPVV 121 (136)
T ss_dssp CSCH--------------HHHTTTHHHHHHHC-CSCEEECTT--CCC----------HHHHHHHHHTTCCEE
T ss_pred eccH--------------HHHHHHHHHHHhhC-CCeEEEecC--ccC----------HHHHHHHHHcCCEEE
Confidence 7643 22345677777778 776654332 211 145666777777655
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.63 E-value=0.066 Score=42.48 Aligned_cols=35 Identities=23% Similarity=0.175 Sum_probs=31.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCED 43 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~ 43 (327)
++|+|+|| |..|..++..|.+.|. +|.++-|++..
T Consensus 2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~~ 37 (288)
T d3c96a1 2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSEI 37 (288)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCCC
Confidence 68999999 9999999999999995 89999887643
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.44 E-value=0.16 Score=40.89 Aligned_cols=31 Identities=19% Similarity=0.187 Sum_probs=26.7
Q ss_pred EcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 13 FGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 13 ~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
--+||..|.+|+++++.+|++|+++.+..+-
T Consensus 42 N~SSGk~G~alA~~~~~~Ga~V~li~g~~s~ 72 (290)
T d1p9oa_ 42 NFSSGRRGATSAEAFLAAGYGVLFLYRARSA 72 (290)
T ss_dssp ECCCCHHHHHHHHHHHHTTCEEEEEEETTSC
T ss_pred CCCchHHHHHHHHHHHHcCCEEEEEecCCcc
Confidence 3467999999999999999999999877543
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=92.29 E-value=0.11 Score=35.47 Aligned_cols=36 Identities=22% Similarity=0.242 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHh---CCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAK---MGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|-.++..|.+ .|.+|+++.|.+.-
T Consensus 18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i 56 (117)
T d1feca2 18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI 56 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence 478999999 9999999976544 48899999987643
|
| >d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.24 E-value=0.74 Score=34.58 Aligned_cols=80 Identities=15% Similarity=0.052 Sum_probs=46.7
Q ss_pred CcEEEEEcCCCccHHHHH-HH---HHhC-----CCEEEEeeCCCCCchhhhccc----CC-----------CCCeeEEee
Q 047628 7 GIIATVFGTTGFLGRYVV-QQ---LAKM-----GSQVLVPFRGCEDDPRHLKLM----GD-----------LGQIVPMKF 62 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~-~~---Ll~~-----g~~V~~~~R~~~~~~~~~~~~----~~-----------~~~v~~~~~ 62 (327)
...++|+||||-+...-+ .+ |... +..|+++.|++-......... .. ..++.++.+
T Consensus 20 ~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~~ 99 (203)
T d1qkia1 20 THIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAG 99 (203)
T ss_dssp CEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCBC
T ss_pred CcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccccC
Confidence 457999999999987422 33 2333 368999999875422111100 00 135777788
Q ss_pred CCCChhHHHHH---hc------cccEEEEcccc
Q 047628 63 NPRDDNTIKAT---MA------KANVVINLIGR 86 (327)
Q Consensus 63 Dl~~~~~~~~~---~~------~~d~vi~~a~~ 86 (327)
|+++++++.++ +. +...|+++|-+
T Consensus 100 d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAvp 132 (203)
T d1qkia1 100 QYDDAASYQRLNSHMNALHLGSQANRLFYLALP 132 (203)
T ss_dssp CTTCHHHHHHHHHHHHHTTTTTTSEEEEEECSC
T ss_pred cCCChhhHHHHHHHHHHHhcCCCcceEEEEecC
Confidence 88877765543 21 23467777644
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=92.23 E-value=0.057 Score=43.73 Aligned_cols=33 Identities=21% Similarity=0.348 Sum_probs=29.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGC 41 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~ 41 (327)
.+|+|+|| |.+|..++..|.++|. +|+++.|+.
T Consensus 2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 36999999 9999999999999995 699999875
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=92.17 E-value=0.064 Score=42.82 Aligned_cols=31 Identities=32% Similarity=0.254 Sum_probs=29.1
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
|+|+|| |..|..++.+|.++|++|.++.+..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899999 9999999999999999999998864
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=92.06 E-value=0.099 Score=35.79 Aligned_cols=36 Identities=19% Similarity=0.177 Sum_probs=28.8
Q ss_pred CcEEEEEcCCCccHHHHHHHHHh---CCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAK---MGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~---~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|-.++..|.+ +|.+|+++.|.+.-
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~i 58 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMI 58 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence 478999999 9999999976654 46789999886543
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.00 E-value=0.064 Score=41.63 Aligned_cols=33 Identities=24% Similarity=0.172 Sum_probs=29.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
-|+|+|| |..|...+..|.++|++|.++-+++.
T Consensus 7 DviViGa-G~~Gl~~A~~La~~G~~V~vlE~~~~ 39 (297)
T d2bcgg1 7 DVIVLGT-GITECILSGLLSVDGKKVLHIDKQDH 39 (297)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 3799998 99999999999999999999988753
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=91.99 E-value=0.077 Score=38.63 Aligned_cols=31 Identities=23% Similarity=0.147 Sum_probs=27.0
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
||+|+|| |++|-.++..|. ++.+|+++.|.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence 7999999 999999999885 578999998764
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.87 E-value=0.093 Score=42.86 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
+..||+|+|| |.-|..-+..|.++|++|.++-++.
T Consensus 4 ~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3468999999 9999999999999999999996654
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=91.85 E-value=0.027 Score=42.03 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR 39 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R 39 (327)
+.+|+|+|| |++|-.++..|.+.|.++.++.+
T Consensus 3 ~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 3 KAPVVVLGA-GLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp CSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence 356999998 99999999999998876555443
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=91.71 E-value=0.12 Score=38.10 Aligned_cols=28 Identities=18% Similarity=0.131 Sum_probs=21.3
Q ss_pred CcccCCcEEEEEcCCCccHHHHHHHHHhC
Q 047628 2 TYVYSGIIATVFGTTGFLGRYVVQQLAKM 30 (327)
Q Consensus 2 ~~~~~~~~ilI~GatG~iG~~l~~~Ll~~ 30 (327)
-+...+++|+|+|. |.+|+..++.|.+.
T Consensus 2 ~~~~~k~kv~iIG~-G~~g~~h~~~l~~~ 29 (172)
T d1lc0a1 2 ITNSGKFGVVVVGV-GRAGSVRLRDLKDP 29 (172)
T ss_dssp CCCCCSEEEEEECC-SHHHHHHHHHHTSH
T ss_pred CCCCCCcEEEEEcC-CHHHHHHHHHHHhC
Confidence 33444689999997 99999988877653
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.50 E-value=0.1 Score=36.91 Aligned_cols=36 Identities=28% Similarity=0.443 Sum_probs=29.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHH----hCCCEEEEeeCCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLA----KMGSQVLVPFRGCED 43 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll----~~g~~V~~~~R~~~~ 43 (327)
.++++|+|| |++|-.++..|. +.|.+|+.+.+.+..
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~~ 76 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKGN 76 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSST
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccccC
Confidence 368999999 999999998885 358999999886643
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=91.42 E-value=0.21 Score=36.48 Aligned_cols=79 Identities=22% Similarity=0.166 Sum_probs=46.9
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhh---hc---ccCCCC-------------CeeEEeeCCCChhH
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRH---LK---LMGDLG-------------QIVPMKFNPRDDNT 69 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~---~~---~~~~~~-------------~v~~~~~Dl~~~~~ 69 (327)
||.|-|- |.||+.+++++++++.+|.++.-........ ++ ..+.++ +-.+....-.++++
T Consensus 2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLlkyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~ 80 (169)
T d1dssg1 2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN 80 (169)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHHHCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHHhcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence 6888886 9999999999999998888876432221111 11 001110 11111112235665
Q ss_pred HHHHhccccEEEEcccccc
Q 047628 70 IKATMAKANVVINLIGREY 88 (327)
Q Consensus 70 ~~~~~~~~d~vi~~a~~~~ 88 (327)
+.-.-.++|+|+-|.|...
T Consensus 81 i~W~~~gvD~ViEcTG~f~ 99 (169)
T d1dssg1 81 IPWSKAGAEYIVESTGVFT 99 (169)
T ss_dssp CCHHHHTCCEEEECSSSCC
T ss_pred CCccccCCCEEEecCceEc
Confidence 5443457999999999753
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=91.36 E-value=0.043 Score=42.64 Aligned_cols=71 Identities=14% Similarity=0.133 Sum_probs=47.7
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEc
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINL 83 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~ 83 (327)
++..++|+|-|- |.+|+++++.|.+.|.+|++.+.+...........+ ... .+++++- -.+||+++-|
T Consensus 36 ~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g----~~~-----~~~~~~~--~~~cDIl~Pc 103 (230)
T d1leha1 36 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG----ADA-----VAPNAIY--GVTCDIFAPC 103 (230)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----CEE-----CCGGGTT--TCCCSEEEEC
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC----Ccc-----cCCcccc--cccccEeccc
Confidence 356789999998 999999999999999999988765433222222111 222 2333321 2469999999
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
|-.
T Consensus 104 A~~ 106 (230)
T d1leha1 104 ALG 106 (230)
T ss_dssp SCS
T ss_pred ccc
Confidence 864
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=91.30 E-value=0.085 Score=38.26 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=51.0
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
+..++++|.|= |.+|+.+++.|...|.+|++.-.+|-.. ++... ...+. ..+.++++..|++|-+.
T Consensus 21 laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~a---lqA~m--dGf~v--------~~~~~a~~~aDi~vTaT 86 (163)
T d1v8ba1 21 ISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICA---IQAVM--EGFNV--------VTLDEIVDKGDFFITCT 86 (163)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHH---HHHHT--TTCEE--------CCHHHHTTTCSEEEECC
T ss_pred ecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchhh---HHHHh--cCCcc--------CchhHccccCcEEEEcC
Confidence 34678999888 9999999999999999999998876442 22211 12222 34577888899999888
Q ss_pred ccc
Q 047628 85 GRE 87 (327)
Q Consensus 85 ~~~ 87 (327)
|..
T Consensus 87 Gn~ 89 (163)
T d1v8ba1 87 GNV 89 (163)
T ss_dssp SSS
T ss_pred CCC
Confidence 764
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=91.10 E-value=0.54 Score=35.59 Aligned_cols=106 Identities=18% Similarity=0.116 Sum_probs=64.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEeeC-------------------C
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN-------------------P 64 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~D-------------------l 64 (327)
..+|.|+|- |.-|.+++..|.+.+. +.+++.-+... +.... ....+..+. .
T Consensus 15 ~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~~----L~~~~--~~~ki~ig~~~t~g~Gag~~p~~g~~aa~ 87 (209)
T d2vapa1 15 KAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDAQQ----LIRTK--ADKKILIGKKLTRGLGAGGNPKIGEEAAK 87 (209)
T ss_dssp CCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBHHH----HHTSC--CSEEEECCTTTTTTBCCTTCHHHHHHHHH
T ss_pred CCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCHHH----HhcCC--cchhcccccccccccccccchHHHHHHHH
Confidence 468999999 7779999999998764 44555443211 11110 011111111 1
Q ss_pred CChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccCCC
Q 047628 65 RDDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLGAS 128 (327)
Q Consensus 65 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~v~ 128 (327)
.+.+.+.+.++++|.||-+||...... .-++.-+++.+++.+ ...+-+++....+
T Consensus 88 e~~~~I~~~l~~~d~vfi~AGlGGGTG--------sgaapvia~~ake~g-~lvv~ivtlPF~~ 142 (209)
T d2vapa1 88 ESAEEIKAAIQDSDMVFITCGLGGGTG--------TGSAPVVAEISKKIG-ALTVAVVTLPFVM 142 (209)
T ss_dssp HTHHHHHHHHTTCSEEEEEEETTSSHH--------HHHHHHHHHHHHHTT-CEEEEEEEECCGG
T ss_pred HHHHHHHHhccCCCEEEEEEeCCCCcc--------ccHHHHHHHHHHHcC-CcEEEEEecchhh
Confidence 134577888899999999999855432 134456888999988 6555555543333
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=90.78 E-value=0.096 Score=40.98 Aligned_cols=33 Identities=21% Similarity=0.293 Sum_probs=29.4
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCE 42 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~ 42 (327)
+|+|+|| |..|...+..|.++|+ +|+++-+++.
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH 35 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 6999999 9999999999999996 7999987653
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=90.76 E-value=0.38 Score=37.06 Aligned_cols=78 Identities=13% Similarity=0.128 Sum_probs=54.2
Q ss_pred CcEEEEEc-CCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFG-TTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~G-atG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.++||=+| |+|..-++|++..-.. -.|++++.++.............+++..+..|..+++.+......+|+|++...
T Consensus 74 G~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~~d~~ 152 (227)
T d1g8aa_ 74 GKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEEEEcc
Confidence 57888555 6788888877754343 489999988765433332223345788999999988877666667899887644
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=90.66 E-value=0.12 Score=41.95 Aligned_cols=35 Identities=29% Similarity=0.447 Sum_probs=31.6
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
...|+|+|| |+.|...+..|.+.|.+|+++.+.++
T Consensus 7 ~~dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~ 41 (298)
T d1w4xa1 7 EVDVLVVGA-GFSGLYALYRLRELGRSVHVIETAGD 41 (298)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence 457999999 99999999999999999999988754
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=90.64 E-value=0.23 Score=37.21 Aligned_cols=101 Identities=18% Similarity=0.214 Sum_probs=62.5
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeCCCCCchhhhcccCCCCCeeEEeeC-C------------------C
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFN-P------------------R 65 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~D-l------------------~ 65 (327)
+||.|+|- |--|.+++..|.+.+ .+.+++.-+.. .+.... ...+...+. . .
T Consensus 1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~~----~L~~~~--a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e 73 (194)
T d1w5fa1 1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDLQ----VLEASN--ADVKIQIGENITRGLGAGGRPEIGEQAALE 73 (194)
T ss_dssp CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCHH----HHHTCC--CSEEEECCTTTTTTSCCTTCHHHHHHHHHH
T ss_pred CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCHH----HHhcCC--cceEEecccccCCCcccccCchhhHhHHHH
Confidence 47889998 777999999999876 35555544321 121110 011111111 1 1
Q ss_pred ChhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 66 DDNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
+.+.+.+.++++|.||-+||...... .-++.-+++.|++.+ ...+-+.+.
T Consensus 74 ~~~~I~~~l~~~d~vfi~AGlGGgTG--------tgaapviA~~ake~g-~lvv~ivtl 123 (194)
T d1w5fa1 74 SEEKIREVLQDTHMVFITAGFGGGTG--------TGASPVIAKIAKEMG-ILTVAIVTT 123 (194)
T ss_dssp THHHHHHHTTTCSEEEEEEETTSSHH--------HHHHHHHHHHHHHTT-CEEEEEEEE
T ss_pred HHHHHHHHhcCCCeEEEEEecCCCcc--------cchHHHHHHHHHHcC-CceEEEEee
Confidence 35677888899999999999855422 244566889999998 655555554
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=90.28 E-value=0.51 Score=34.54 Aligned_cols=31 Identities=19% Similarity=0.307 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC----CEEEEeeC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG----SQVLVPFR 39 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g----~~V~~~~R 39 (327)
|||.|=|- |.||+.++|.+++++ .+|.++.-
T Consensus 2 ikigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd 36 (173)
T d1obfo1 2 IRVAINGY-GRIGRNILRAHYEGGKSHDIEIVAIND 36 (173)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEEC
T ss_pred eEEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcC
Confidence 68999986 999999999998753 46666553
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=90.24 E-value=0.21 Score=41.10 Aligned_cols=73 Identities=5% Similarity=0.171 Sum_probs=51.7
Q ss_pred CcEEEEEcCCCccHHHHHHHHHh-CC-CEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAK-MG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~-~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
.+++.|+|+ |.++..-++.+.+ .+ .+|++.+|++++..+.........++++..++ ++.++++++|+|+-|.
T Consensus 128 a~~l~iiG~-G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~-----s~~eav~~ADIi~t~T 201 (340)
T d1x7da_ 128 ARKMALIGN-GAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRAS-----SVAEAVKGVDIITTVT 201 (340)
T ss_dssp CCEEEEECC-STTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECS-----SHHHHHTTCSEEEECC
T ss_pred CceEEEEcc-cHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecC-----CHHHHHhcCCceeecc
Confidence 468899998 8889988887765 34 58999999987654444333323346655543 5778889999999776
Q ss_pred c
Q 047628 85 G 85 (327)
Q Consensus 85 ~ 85 (327)
+
T Consensus 202 a 202 (340)
T d1x7da_ 202 A 202 (340)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1rm4a1 c.2.1.3 (A:1-148,A:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Spinach (Spinacia oleracea) [TaxId: 3562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Spinach (Spinacia oleracea) [TaxId: 3562]
Probab=90.05 E-value=1.1 Score=32.56 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCC---CEEEEeeC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMG---SQVLVPFR 39 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g---~~V~~~~R 39 (327)
|||.|-|- |.||+.++|.++++. .+|.++.-
T Consensus 1 ikIgINGf-GRIGR~v~R~~~~~~~~~i~ivaINd 34 (172)
T d1rm4a1 1 LKVAINGF-GRIGRNFLRCWHGRKDSPLDVVVIND 34 (172)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEEcC
Confidence 58999886 999999999988753 56776643
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=89.27 E-value=0.3 Score=35.76 Aligned_cols=75 Identities=15% Similarity=0.219 Sum_probs=45.2
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCC-CEEEEeeCCCCCchhhhcccCCCCCeeEEee-CCCC-hhHHHHHh--ccccEEE
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMG-SQVLVPFRGCEDDPRHLKLMGDLGQIVPMKF-NPRD-DNTIKATM--AKANVVI 81 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~-Dl~~-~~~~~~~~--~~~d~vi 81 (327)
..+|+|+|++| +|...+..+...| ..|+++++++++. +...+++. -+.+.. +-.+ .+...+.. .++|++|
T Consensus 29 g~~VlI~G~Gg-~g~~~~~~~~~~g~~~Vi~~~~~~~rl-~~a~~~GA---d~~in~~~~~~~~~~~~~~~~~~G~d~vi 103 (175)
T d1cdoa2 29 GSTCAVFGLGA-VGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAKVFGA---TDFVNPNDHSEPISQVLSKMTNGGVDFSL 103 (175)
T ss_dssp TCEEEEECCSH-HHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTC---CEEECGGGCSSCHHHHHHHHHTSCBSEEE
T ss_pred CCEEEEEecCC-ccchHHHHHHHHhhchheeecchHHHH-HHHHHcCC---cEEEcCCCcchhHHHHHHhhccCCcceee
Confidence 46899999855 6777676666665 5799998887764 33334441 122221 1111 23333333 3589999
Q ss_pred Ecccc
Q 047628 82 NLIGR 86 (327)
Q Consensus 82 ~~a~~ 86 (327)
.+.|.
T Consensus 104 d~~G~ 108 (175)
T d1cdoa2 104 ECVGN 108 (175)
T ss_dssp ECSCC
T ss_pred eecCC
Confidence 99885
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=89.15 E-value=0.29 Score=31.53 Aligned_cols=32 Identities=19% Similarity=0.185 Sum_probs=26.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
|||||+|+.|. -.+++..|.++.+++++..-+
T Consensus 1 MkVLviGsGgR-EHAia~~l~~s~~~v~~~pGN 32 (90)
T d1vkza2 1 VRVHILGSGGR-EHAIGWAFAKQGYEVHFYPGN 32 (90)
T ss_dssp CEEEEEECSHH-HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECCCHH-HHHHHHHHhcCCCeEEEecCC
Confidence 79999999766 778899999889999987443
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=88.96 E-value=0.95 Score=34.00 Aligned_cols=33 Identities=18% Similarity=0.157 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
+|||+++|. +..+..+++.|++.|++|.++.-.
T Consensus 3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~ 35 (206)
T d1fmta2 3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQ 35 (206)
T ss_dssp CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeC
Confidence 578999986 678889999999999998776543
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=88.89 E-value=0.79 Score=35.22 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=51.3
Q ss_pred CcEEEEEc-CCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFG-TTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~G-atG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.++||=+| |||..-++|++. ... -.|++++.++.............+++..+.+|..++.........+|++++...
T Consensus 75 G~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~~~~ 152 (230)
T d1g8sa_ 75 DSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYEDVA 152 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC
T ss_pred CCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeecccc
Confidence 57899776 567777787774 333 499999988754333222223346788999999988876655555666666543
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=88.85 E-value=1.4 Score=31.89 Aligned_cols=30 Identities=20% Similarity=0.241 Sum_probs=24.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhC---CCEEEEeeC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKM---GSQVLVPFR 39 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~---g~~V~~~~R 39 (327)
||.|=|- |.||+.++|.++++ +.+|.++.-
T Consensus 2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd 34 (169)
T d1hdgo1 2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAIND 34 (169)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred EEEEECC-ChHHHHHHHHHHhccCCCEEEEEecc
Confidence 6888886 99999999999864 368887753
|
| >d1q7ea_ c.123.1.1 (A:) Hypothetical protein YfdW {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: Hypothetical protein YfdW species: Escherichia coli [TaxId: 562]
Probab=88.59 E-value=2.8 Score=34.96 Aligned_cols=115 Identities=18% Similarity=0.183 Sum_probs=68.4
Q ss_pred CCcccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC-chhh------------hcccCCCCCeeEEeeCCCCh
Q 047628 1 MTYVYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED-DPRH------------LKLMGDLGQIVPMKFNPRDD 67 (327)
Q Consensus 1 ~~~~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~-~~~~------------~~~~~~~~~v~~~~~Dl~~~ 67 (327)
|+.++...|||=++. ..-|....+.|.+.|.+|+-+-+.... ..+. +..+. .+-+.+..|+.++
T Consensus 1 m~~PL~GirVld~~~-~~agp~~~~~Lad~GAeVIkvE~p~~gd~~R~~~~~~~~~~s~~~~~~n--r~K~si~lDL~~~ 77 (417)
T d1q7ea_ 1 LSTPLQGIKVLDFTG-VQSGPSCTQMLAWFGADVIKIERPGVGDVTRHQLRDIPDIDALYFTMLN--SNKRSIELNTKTA 77 (417)
T ss_dssp CCCTTTTCEEEECCC-TTHHHHHHHHHHHTTCEEEEEECTTTCCGGGTTTCSSTTSCCHHHHTTC--TTCEEEECCTTSH
T ss_pred CCCCCCCCEEEEcCC-hhHHHHHHHHHHHhCCeEEEECCCCCCCchhccCCCCCCCccHHHHHhC--CCCeEEEEeCcCH
Confidence 667777777776553 455666667777889999999764311 1110 11111 2457889999887
Q ss_pred h---HHHHHhccccEEEEccccccccCcchhHhhhhHHHHHH-HHHHHHcCCcceEEEEeccCCCCCCC
Q 047628 68 N---TIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERI-AGIAKEHGGIMRFIQISCLGASSSSP 132 (327)
Q Consensus 68 ~---~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l-~~a~~~~~~v~~~v~~Ss~~v~~~~~ 132 (327)
+ .+.++++.+|+||++-.+..-.. ..| .+.+++.+ .++||+|-.+-....|
T Consensus 78 ~g~~~~~~Li~~aDv~i~n~~pg~~~r------------lGl~~~~l~~~n--P~lI~~sisgfG~~GP 132 (417)
T d1q7ea_ 78 EGKEVMEKLIREADILVENFHPGAIDH------------MGFTWEHIQEIN--PRLIFGSIKGFDECSP 132 (417)
T ss_dssp HHHHHHHHHHHHCSEEEECCCC-------------------CCHHHHHHHC--TTCEEEEEESSCTTST
T ss_pred HHHHHHHHHHhcCcccEeccCCCcHhh------------cCCCHHHHHhhC--CCEEEEeeeccccccc
Confidence 4 55678889999998864421100 001 23344554 5788888766544444
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=88.52 E-value=0.32 Score=36.70 Aligned_cols=68 Identities=18% Similarity=0.182 Sum_probs=45.8
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHh-ccccEEEEc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATM-AKANVVINL 83 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~-~~~d~vi~~ 83 (327)
+..++|+|-|- |.+|+++++.|.+.|.+|++.+.+...... .... +.+.+ +.++ ++ .+||+++-|
T Consensus 25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~-~~~~----g~~~~-----~~~~---~~~~~~DI~iPc 90 (201)
T d1c1da1 25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAH-AVAL----GHTAV-----ALED---VLSTPCDVFAPC 90 (201)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHT----TCEEC-----CGGG---GGGCCCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHH-HHhh----ccccc-----Cccc---cccccceeeecc
Confidence 55689999986 999999999999999999988765443221 1111 12221 2222 33 369999988
Q ss_pred ccc
Q 047628 84 IGR 86 (327)
Q Consensus 84 a~~ 86 (327)
|..
T Consensus 91 A~~ 93 (201)
T d1c1da1 91 AMG 93 (201)
T ss_dssp SCS
T ss_pred ccc
Confidence 743
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=88.28 E-value=0.0096 Score=43.35 Aligned_cols=63 Identities=16% Similarity=0.114 Sum_probs=33.5
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
|-++|+ |.+|+++++.|.+.++.+.+.+|++++.... ...+. .. .. +..++++.+|+||-|..
T Consensus 2 IgfIG~-G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l-~~~~~---~~-----~~---~~~~~~~~~DiVil~v~ 64 (153)
T d2i76a2 2 LNFVGT-GTLTRFFLECLKDRYEIGYILSRSIDRARNL-AEVYG---GK-----AA---TLEKHPELNGVVFVIVP 64 (153)
T ss_dssp CEEESC-CHHHHHHHHTTC----CCCEECSSHHHHHHH-HHHTC---CC-----CC---SSCCCCC---CEEECSC
T ss_pred EEEEeC-cHHHHHHHHHHHhCCCEEEEEeCChhhhcch-hhccc---cc-----cc---chhhhhccCcEEEEecc
Confidence 346676 9999999998755444345778887664333 22220 11 11 12245677899998764
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=87.99 E-value=0.28 Score=37.65 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=39.1
Q ss_pred cEEEEEcCCCccHH-HHHHHHHhC-CCEEEEe-eCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhc--cccEEEE
Q 047628 8 IIATVFGTTGFLGR-YVVQQLAKM-GSQVLVP-FRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMA--KANVVIN 82 (327)
Q Consensus 8 ~~ilI~GatG~iG~-~l~~~Ll~~-g~~V~~~-~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~--~~d~vi~ 82 (327)
-+|.|+|. |.+|+ +++..+... +.+|+++ +|++++.....+..+ .+..... ..+| +.++++ ++|+|+-
T Consensus 34 iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~-i~~~~~~--~~~d---~~ell~~~~iD~V~I 106 (221)
T d1h6da1 34 FGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYG-VDPRKIY--DYSN---FDKIAKDPKIDAVYI 106 (221)
T ss_dssp EEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTT-CCGGGEE--CSSS---GGGGGGCTTCCEEEE
T ss_pred EEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhc-ccccccc--ccCc---hhhhcccccceeeee
Confidence 58999997 88896 566666554 6787765 555444332222221 1111111 1123 344454 5899986
Q ss_pred cccc
Q 047628 83 LIGR 86 (327)
Q Consensus 83 ~a~~ 86 (327)
+...
T Consensus 107 ~tp~ 110 (221)
T d1h6da1 107 ILPN 110 (221)
T ss_dssp CSCG
T ss_pred ccch
Confidence 6543
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.79 E-value=0.22 Score=40.59 Aligned_cols=31 Identities=26% Similarity=0.244 Sum_probs=28.6
Q ss_pred EEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
|+|+|| |..|...+..|.++|++|+++-++.
T Consensus 2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 789999 9999999999999999999998755
|
| >d1x74a1 c.123.1.1 (A:2-360) 2-methylacyl-CoA racemase Mcr {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: CoA-transferase family III (CaiB/BaiF) superfamily: CoA-transferase family III (CaiB/BaiF) family: CoA-transferase family III (CaiB/BaiF) domain: 2-methylacyl-CoA racemase Mcr species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=87.09 E-value=4.3 Score=32.96 Aligned_cols=109 Identities=17% Similarity=0.091 Sum_probs=60.9
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChh---HHHHHhccccEEEEc
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDN---TIKATMAKANVVINL 83 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~---~~~~~~~~~d~vi~~ 83 (327)
..+||=++- ..-|....+.|.+.|.+|+-+-+........+.... -+-+.+..|+.+++ .+.++++++|+||++
T Consensus 6 girVld~~~-~~agp~~~~~lad~GA~VikvE~p~~~~~~~~~~~n--r~K~si~lDl~~~~g~~~~~~Lv~~aDv~i~n 82 (359)
T d1x74a1 6 GLRVVELAG-IGPGPHAAMILGDLGADVVRIDRPSSVDGISRDAML--RNRRIVTADLKSDQGLELALKLIAKADVLIEG 82 (359)
T ss_dssp TCEEEEECC-STHHHHHHHHHHHTTCEEEEEECC-----CCCCGGG--CSCEEEECCTTSHHHHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEcCC-chHHHHHHHHHHHhCCEEEEECCCCCCCchhhhhhh--CCCeEEEEeCcCHHHHHHHHHHHhhCCEEEec
Confidence 344554333 344556566677789999998765432222222221 24577889998875 566778999999988
Q ss_pred cccccccCcchhHhhhhHHHHHH-HHHHHHcCCcceEEEEeccCCCCCCC
Q 047628 84 IGREYETRNYSFEDVNHFMAERI-AGIAKEHGGIMRFIQISCLGASSSSP 132 (327)
Q Consensus 84 a~~~~~~~~~~~~~~n~~~~~~l-~~a~~~~~~v~~~v~~Ss~~v~~~~~ 132 (327)
-.+..- .+ ..| .+.+++.+ .++||+|-.+-....|
T Consensus 83 ~~pg~~------~~------lgl~~~~l~~~n--P~lI~~sisgfG~~Gp 118 (359)
T d1x74a1 83 YRPGVT------ER------LGLGPEECAKVN--DRLIYARMTGWGQTGP 118 (359)
T ss_dssp SCTTHH------HH------HTCSHHHHHHHC--TTCEEEEEESSCSSST
T ss_pred CCCCch------hh------cCCCHHHHHhhc--CCceEEEEeCCCCCCC
Confidence 654210 00 111 23344554 5788887755433333
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=87.06 E-value=0.28 Score=38.03 Aligned_cols=34 Identities=26% Similarity=0.234 Sum_probs=30.6
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
-|+|+|| |..|...+..|.++|++|.++.+++..
T Consensus 4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~ 37 (251)
T d2i0za1 4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL 37 (251)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4899999 999999999999999999999987654
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=87.04 E-value=1.9 Score=31.12 Aligned_cols=96 Identities=19% Similarity=0.173 Sum_probs=54.5
Q ss_pred EEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCCCch--hhh-c---ccCCC---------------CCeeEEeeCCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCEDDP--RHL-K---LMGDL---------------GQIVPMKFNPRD 66 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~--~~~-~---~~~~~---------------~~v~~~~~Dl~~ 66 (327)
||.|=|- |.||+.+.+.++++ +.+|.++.-...... ..+ + ..+.+ ..+.+. .-.+
T Consensus 2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLlkyDS~hG~~~~~v~~~~~~l~i~~~~I~i~--~~~~ 78 (166)
T d2b4ro1 2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVF--AEKD 78 (166)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHHHCCTTTCSCSSCEEEETTEEEESSCEEEEE--CCSS
T ss_pred eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhhhcccccccceeeeccCCceEEecCcEEEEE--eCCC
Confidence 6888777 99999999999986 467777753221211 111 1 00111 112222 2235
Q ss_pred hhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEE
Q 047628 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQI 122 (327)
Q Consensus 67 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~ 122 (327)
++++.-.-.++|+|+-|.|.... ...++.-.+.| ++++|..
T Consensus 79 p~~i~W~~~gvdiViEcTG~f~~--------------~~~~~~hl~~g-akkViiS 119 (166)
T d2b4ro1 79 PSQIPWGKCQVDVVCESTGVFLT--------------KELASSHLKGG-AKKVIMS 119 (166)
T ss_dssp GGGCCHHHHTCSEEEECSSSCCS--------------HHHHTHHHHTT-CSEEEES
T ss_pred hHHccccccCCCEEEEecccccc--------------hhhhhhhhccC-CCEEEEe
Confidence 66544333489999999997532 12233334567 8888753
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=86.64 E-value=2.4 Score=31.44 Aligned_cols=36 Identities=25% Similarity=0.330 Sum_probs=24.2
Q ss_pred cEEEEEcCCCccHHHHH-HHH---HhCC-----CEEEEeeCCCCC
Q 047628 8 IIATVFGTTGFLGRYVV-QQL---AKMG-----SQVLVPFRGCED 43 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~-~~L---l~~g-----~~V~~~~R~~~~ 43 (327)
..++|+||||-+.+.-+ .+| ...| ..|+++.|+.-.
T Consensus 6 t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~ 50 (195)
T d1h9aa1 6 TLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALN 50 (195)
T ss_dssp EEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCC
T ss_pred eEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCc
Confidence 34668899999987432 222 2333 679999998654
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=86.55 E-value=0.31 Score=40.32 Aligned_cols=32 Identities=31% Similarity=0.351 Sum_probs=28.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
-|+|+|+ |+-|..++.+|.++|++|.++-|..
T Consensus 4 ~VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG~ 35 (367)
T d1n4wa1 4 PAVVIGT-GYGAAVSALRLGEAGVQTLMLEMGQ 35 (367)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEeCc-CHHHHHHHHHHHHCcCeEEEEecCC
Confidence 3788888 9999999999999999999998853
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=86.32 E-value=0.35 Score=36.99 Aligned_cols=34 Identities=26% Similarity=0.221 Sum_probs=29.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC--CCEEEEeeCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM--GSQVLVPFRGCE 42 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~--g~~V~~~~R~~~ 42 (327)
.||+|+|| |.-|...+..|.++ |++|+++.+.+.
T Consensus 2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQLV 37 (230)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 58999999 99999999999765 789999988754
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=86.04 E-value=0.69 Score=33.97 Aligned_cols=74 Identities=12% Similarity=-0.073 Sum_probs=43.4
Q ss_pred CCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccC--------------CCCCeeEEeeCCCChhHHH
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMG--------------DLGQIVPMKFNPRDDNTIK 71 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~--------------~~~~v~~~~~Dl~~~~~~~ 71 (327)
...+||.+|. |. |+ .+..|+++|++|++++.++.......+... ......++.+|..+.....
T Consensus 20 ~~~rvLd~GC-G~-G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 96 (201)
T d1pjza_ 20 PGARVLVPLC-GK-SQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD 96 (201)
T ss_dssp TTCEEEETTT-CC-SH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred CCCEEEEecC-cC-CH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence 3579999997 33 55 455677889999999887543211111000 0134577888876644322
Q ss_pred HHhccccEEEEcc
Q 047628 72 ATMAKANVVINLI 84 (327)
Q Consensus 72 ~~~~~~d~vi~~a 84 (327)
....|+|+...
T Consensus 97 --~~~~D~i~~~~ 107 (201)
T d1pjza_ 97 --IGHCAAFYDRA 107 (201)
T ss_dssp --HHSEEEEEEES
T ss_pred --ccceeEEEEEe
Confidence 23467776543
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=85.56 E-value=0.48 Score=36.82 Aligned_cols=35 Identities=29% Similarity=0.426 Sum_probs=30.9
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
+..++|+|-|. |.+|+++++.|.+.|.+|++++-.
T Consensus 29 l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 29 IEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence 45689999987 999999999999999999988754
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=85.24 E-value=1.4 Score=31.86 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFR 39 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R 39 (327)
.||.|=|- |.||+.+.|.++++ ..+|.++.-
T Consensus 2 ikIgINGF-GRIGR~v~R~~~~~~~~~ivaINd 33 (169)
T d1u8fo1 2 VKVGVNGF-GRIGRLVTRAAFNSGKVDIVAIND 33 (169)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSSEEEEEEC
T ss_pred cEEEEECC-cHHHHHHHHHHHHCCCcEEEEecC
Confidence 58999886 99999999999876 478877754
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.05 E-value=0.63 Score=33.25 Aligned_cols=35 Identities=20% Similarity=0.193 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCC-EEEEeeCCCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGS-QVLVPFRGCE 42 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~-~V~~~~R~~~ 42 (327)
.++|+|+|| |.+|--.+..+++.|. .|+++.|.+.
T Consensus 45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~~ 80 (153)
T d1gtea3 45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKGF 80 (153)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence 468999999 9999999999999985 5888888653
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=84.72 E-value=2.8 Score=31.12 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=60.7
Q ss_pred EEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEee-----------C--------CCCh
Q 047628 10 ATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKF-----------N--------PRDD 67 (327)
Q Consensus 10 ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~-----------D--------l~~~ 67 (327)
|-|+|- |--|.+++..+.+.+. +.+++.-+... +.... ...+...+ | ..+.
T Consensus 4 IkViGv-GGaG~n~vn~~~~~~~~~v~~iainTD~~~----L~~~~--~~~ki~iG~~~t~G~Gagg~p~~g~~aa~e~~ 76 (198)
T d1rq2a1 4 IKVVGI-GGGGVNAVNRMIEQGLKGVEFIAINTDAQA----LLMSD--ADVKLDVGRDSTRGLGAGADPEVGRKAAEDAK 76 (198)
T ss_dssp EEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESCHHH----HHHCC--CSEEEECCTTTC-----CCCHHHHHHHHHHTH
T ss_pred EEEEEe-CchHHHHHHHHHHcCCCCceEEEEcchHHH----HhcCC--cchhhccccccccCCCcCcChhhhHhhHHHHH
Confidence 556666 4459999999998864 45555433111 11110 11122221 1 1245
Q ss_pred hHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEeccC
Q 047628 68 NTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISCLG 126 (327)
Q Consensus 68 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss~~ 126 (327)
+.+.+.++++|.||-+||...... .-++.-+++.|++.+ +-.+-+++...
T Consensus 77 ~~I~~~l~~~d~vfi~AGlGGgTG--------tGaaPviA~iake~g-~l~v~ivt~PF 126 (198)
T d1rq2a1 77 DEIEELLRGADMVFVTAGEGGGTG--------TGGAPVVASIARKLG-ALTVGVVTRPF 126 (198)
T ss_dssp HHHHHHHTTCSEEEEEEETTSSHH--------HHHHHHHHHHHHHHT-CEEEEEEEECC
T ss_pred HHHHHHhcCCCEEEEEEecCCCCC--------cchHHHHHHHHHHcC-CcEEEEEecCh
Confidence 678888999999999999855432 234556888999998 65555555433
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=84.35 E-value=0.49 Score=37.06 Aligned_cols=35 Identities=17% Similarity=0.252 Sum_probs=30.9
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeC
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFR 39 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R 39 (327)
++..++++|-|. |.+|+++++.|.+.|.+|++++-
T Consensus 33 ~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 33 TLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp CSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence 456789999996 99999999999999999998864
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=84.31 E-value=0.49 Score=34.48 Aligned_cols=68 Identities=22% Similarity=0.251 Sum_probs=51.5
Q ss_pred cCCcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEcc
Q 047628 5 YSGIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLI 84 (327)
Q Consensus 5 ~~~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a 84 (327)
.++++|.|+|= |-.|.+=+.-|.++|.+|++-.|..++.....+.. .++. -++.++.+.+|+|..+.
T Consensus 14 ik~k~IaViGY-GsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~~~----Gf~v--------~~~~eA~~~aDiim~L~ 80 (182)
T d1np3a2 14 IQGKKVAIIGY-GSQGHAHACNLKDSGVDVTVGLRSGSATVAKAEAH----GLKV--------ADVKTAVAAADVVMILT 80 (182)
T ss_dssp HHTSCEEEECC-SHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHT----TCEE--------ECHHHHHHTCSEEEECS
T ss_pred HCCCEEEEEee-CcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHhhh----cccc--------ccHHHHhhhcCeeeeec
Confidence 34689999998 88999999999999999999888776543333322 2333 35677888999999887
Q ss_pred c
Q 047628 85 G 85 (327)
Q Consensus 85 ~ 85 (327)
.
T Consensus 81 P 81 (182)
T d1np3a2 81 P 81 (182)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=83.60 E-value=1.8 Score=31.39 Aligned_cols=31 Identities=23% Similarity=0.260 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFR 39 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R 39 (327)
.||.|-|- |.||+.++++++++ +.+|.++.-
T Consensus 2 ikIgINGf-GRIGR~v~R~~l~~~~~~ivaINd 33 (171)
T d3cmco1 2 VKVGINGF-GRIGRNVFRAALKNPDIEVVAVND 33 (171)
T ss_dssp EEEEEESC-SHHHHHHHHHHTTCTTEEEEEEEC
T ss_pred eEEEEECC-CHHHHHHHHHHhhCCCcEEEEEcC
Confidence 37888886 99999999999987 467777764
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=83.60 E-value=0.47 Score=38.02 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=30.0
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCE 42 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (327)
-|+|+|+ |..|...+..|.++|.+|.++.+.+.
T Consensus 18 DVlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~~ 50 (308)
T d1y0pa2 18 DVVVVGS-GGAGFSAAISATDSGAKVILIEKEPV 50 (308)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 4899999 99999999999999999999988653
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=83.59 E-value=0.45 Score=38.76 Aligned_cols=34 Identities=18% Similarity=0.161 Sum_probs=29.3
Q ss_pred EEEEEcCCCccHHHHHHHHH-----hCCCEEEEeeCCCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLA-----KMGSQVLVPFRGCED 43 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll-----~~g~~V~~~~R~~~~ 43 (327)
-|+|+|| |..|..++..|. .+|++|+++.|.+..
T Consensus 9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~ 47 (360)
T d1pn0a1 9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 47 (360)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence 5899999 999999999996 469999999987644
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=82.89 E-value=0.33 Score=36.86 Aligned_cols=77 Identities=13% Similarity=0.191 Sum_probs=51.0
Q ss_pred CcEEEEEcC-CCccHHHHHHHHHhCCCEEEEeeCCCCCchhhhcccCCCCCeeEEeeCCCChhHHHHHhccccEEEEccc
Q 047628 7 GIIATVFGT-TGFLGRYVVQQLAKMGSQVLVPFRGCEDDPRHLKLMGDLGQIVPMKFNPRDDNTIKATMAKANVVINLIG 85 (327)
Q Consensus 7 ~~~ilI~Ga-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~d~vi~~a~ 85 (327)
.++||=+|+ ||..-.++++.. ..| +|++++-++.......+.....+++.++..|..++......+..+|+|+|...
T Consensus 57 g~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~~~~ 134 (209)
T d1nt2a_ 57 DERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQDIA 134 (209)
T ss_dssp SCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEECCC
T ss_pred CCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEeccc
Confidence 478886664 566666665543 445 89999988754332222112235799999999998877666667888887543
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=82.58 E-value=0.73 Score=37.23 Aligned_cols=34 Identities=26% Similarity=0.130 Sum_probs=23.1
Q ss_pred cEEEEEcC-C-Ccc--HHHHHHHHHhCCCEEEEeeCCC
Q 047628 8 IIATVFGT-T-GFL--GRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 8 ~~ilI~Ga-t-G~i--G~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
+||+|++| | |.+ ...|+++|.++||+|..++...
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~ 38 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTAD 38 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 47887764 3 332 2247788889999998876543
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.55 E-value=0.69 Score=34.80 Aligned_cols=32 Identities=28% Similarity=0.401 Sum_probs=27.0
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
|||+++|. +..|..+++.|+++|++|.++.-.
T Consensus 1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t~ 32 (203)
T d2bw0a2 1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFTV 32 (203)
T ss_dssp CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEcC
Confidence 68999987 567999999999999999877543
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=82.40 E-value=0.57 Score=36.99 Aligned_cols=34 Identities=21% Similarity=0.194 Sum_probs=29.9
Q ss_pred cEEEEEcCCCccHHHHHHHHHhC-CCEEEEeeCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKM-GSQVLVPFRGCE 42 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~-g~~V~~~~R~~~ 42 (327)
.-|+|+|| |.-|...+..|.++ |++|.++.+.+.
T Consensus 34 ~DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~ 68 (278)
T d1rp0a1 34 TDVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVS 68 (278)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred CCEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCC
Confidence 35999999 99999999999875 999999998764
|
| >d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Pseudomonas aeruginosa [TaxId: 287]
Probab=82.31 E-value=1.3 Score=33.02 Aligned_cols=100 Identities=23% Similarity=0.218 Sum_probs=61.1
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCC---EEEEeeCCCCCchhhhcccCCCCCeeEEee-----------C--------CCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGS---QVLVPFRGCEDDPRHLKLMGDLGQIVPMKF-----------N--------PRD 66 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~~~~~~~~~~~~~~v~~~~~-----------D--------l~~ 66 (327)
+|.|+|- |-.|.+++..|.+.+. +.+++.-+...... .. ...++..+ | ..+
T Consensus 3 ~IkViGv-GGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~----~~--~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~ 75 (198)
T d1ofua1 3 VIKVIGV-GGGGGNAVNHMAKNNVEGVEFICANTDAQALKN----IA--ARTVLQLGPGVTKGLGAGANPEVGRQAALED 75 (198)
T ss_dssp CEEEEEE-HHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSS----CS--CSEEEECCHHHHTTBCCCSCHHHHHHHHHHT
T ss_pred eEEEEEE-CchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhc----CC--ccceeccccccccCCCCCCChHHHHHHHHHH
Confidence 4677887 6679999999998863 56665544322111 00 00111111 1 114
Q ss_pred hhHHHHHhccccEEEEccccccccCcchhHhhhhHHHHHHHHHHHHcCCcceEEEEec
Q 047628 67 DNTIKATMAKANVVINLIGREYETRNYSFEDVNHFMAERIAGIAKEHGGIMRFIQISC 124 (327)
Q Consensus 67 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~v~~~v~~Ss 124 (327)
.+.+.+.++++|.||-+||...... .-++.-+++.|++.+ +..+-+++.
T Consensus 76 ~~~I~~~l~~~d~vfi~AGlGGGTG--------tgaapviA~~ake~g-~lvvaivtl 124 (198)
T d1ofua1 76 RERISEVLEGADMVFITTGMGGGTG--------TGAAPIIAEVAKEMG-ILTVAVVTR 124 (198)
T ss_dssp HHHHHHHHTTCSEEEEEEETTSSHH--------HHHHHHHHHHHHHTT-CEEEEEEEE
T ss_pred HHHHHHHhCCCCeEEEEecCCCCcc--------ccHHHHHHHHHHHcC-CCEEEEEec
Confidence 5677888899999999999865432 134456889999998 655545544
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=82.08 E-value=0.63 Score=36.10 Aligned_cols=35 Identities=31% Similarity=0.374 Sum_probs=31.3
Q ss_pred cEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCCCC
Q 047628 8 IIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGCED 43 (327)
Q Consensus 8 ~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (327)
..|+|+|| |-.|...+..|.++|.+|.++.+.+..
T Consensus 5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 35999999 999999999999999999999988654
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=82.00 E-value=3.2 Score=31.71 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=29.0
Q ss_pred ccCCcEEEEEcCCCccHHHHHHHHHh-CCCEEEEeeC
Q 047628 4 VYSGIIATVFGTTGFLGRYVVQQLAK-MGSQVLVPFR 39 (327)
Q Consensus 4 ~~~~~~ilI~GatG~iG~~l~~~Ll~-~g~~V~~~~R 39 (327)
++..++|+|-|. |.+|+++++.|.+ .|..|++++-
T Consensus 28 ~l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd 63 (234)
T d1b26a1 28 DPKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSD 63 (234)
T ss_dssp CTTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeec
Confidence 456789999986 9999999999975 5999988763
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=81.83 E-value=0.63 Score=38.36 Aligned_cols=31 Identities=26% Similarity=0.367 Sum_probs=28.1
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
-++|+|+ |+-|..++.+|.++|++|.++-+.
T Consensus 9 dvIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIGS-GYGGAVAALRLTQAGIPTQIVEMG 39 (370)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4788888 999999999999999999999875
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=81.35 E-value=0.75 Score=37.66 Aligned_cols=32 Identities=22% Similarity=0.242 Sum_probs=28.8
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRGC 41 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (327)
-++|+|+ |.-|.-++.+|.+.|++|.++-+..
T Consensus 6 DviIVGs-G~aG~v~A~~La~~G~kVlvLEaG~ 37 (379)
T d2f5va1 6 DVVIVGS-GPIGCTYARELVGAGYKVAMFDIGE 37 (379)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred cEEEECc-CHHHHHHHHHHhhCCCeEEEEecCC
Confidence 4888888 9999999999999999999997754
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=81.20 E-value=0.71 Score=34.73 Aligned_cols=31 Identities=16% Similarity=0.067 Sum_probs=28.3
Q ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 9 IATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 9 ~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
-++|+|| |+.|...+..+.+.|.+|.++.+.
T Consensus 4 DvvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 4 DYIAIGG-GSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 3789999 999999999999999999999875
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=80.82 E-value=0.46 Score=39.84 Aligned_cols=33 Identities=27% Similarity=0.367 Sum_probs=25.4
Q ss_pred cEEEEEcC------CCccH---HHHHHHHHhCCCEEEEeeCC
Q 047628 8 IIATVFGT------TGFLG---RYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 8 ~~ilI~Ga------tG~iG---~~l~~~Ll~~g~~V~~~~R~ 40 (327)
||||+++. +|-+| ..|+++|.+.||+|++++..
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp~ 42 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPS 42 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEecC
Confidence 78998774 35555 56788999999999998743
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=80.74 E-value=6 Score=26.40 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCccHHHHHHHHHhCCCEEEEeeCC
Q 047628 7 GIIATVFGTTGFLGRYVVQQLAKMGSQVLVPFRG 40 (327)
Q Consensus 7 ~~~ilI~GatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (327)
+.+|+|-|-||..|+.-+++.++-|-+|.+=+..
T Consensus 6 ~trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtP 39 (119)
T d2nu7a1 6 NTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTP 39 (119)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECT
T ss_pred CCcEEEEcCCCcHHHHHHHHHHHhCCceEEEEcc
Confidence 5789999999999999999999999887765443
|
| >d1lqta1 c.3.1.1 (A:109-324) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.12 E-value=9 Score=28.45 Aligned_cols=37 Identities=30% Similarity=0.280 Sum_probs=30.0
Q ss_pred CCcEEEEEcCCCccHHHHHHHHH--------------------hCC-CEEEEeeCCCCC
Q 047628 6 SGIIATVFGTTGFLGRYVVQQLA--------------------KMG-SQVLVPFRGCED 43 (327)
Q Consensus 6 ~~~~ilI~GatG~iG~~l~~~Ll--------------------~~g-~~V~~~~R~~~~ 43 (327)
..++|+|+|+ |.++.=+++.|+ +.| .+|+++.|+...
T Consensus 38 ~gk~VvVIGg-GNvAlD~AR~ll~~~~~l~~tdi~~~~l~~l~r~~~~~V~iv~RRg~~ 95 (216)
T d1lqta1 38 SGARAVVIGN-GNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 95 (216)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred cCceEEEECC-CchhHhhhhhhccCHhhhccCCCcHHHHHHHhhcCCceEEEEEECChH
Confidence 4689999999 999999999887 445 479999887644
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