Citrus Sinensis ID: 047639

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Protein Sequence
MMMVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYCYCMRENDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSSSSISVTNMDMQQHLADSVAEQQLQRQQQQPQPLQQLEQQQQYASYDPFSTQTMSTGYDYFNDHDHQLEQAHTSEQLFTTLWSWQ
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHcccccccccccEEEEEccccccccccccccccEEEcccccccccccccccccccccccEEEEEcccccccccEEEEcccEEEccccccccccccccccccEEEEcccccccccEEEEEEEEEcccccHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHcccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccHHHHHHHHHHHHcccccccccEEEEEEEcccccccccccccccEEEEEccccHHHHHHcccccEEEccccccEEcccccccccEEEEEEEEEEEEEcccccccccccccccEEEEEEEcccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
mmmvpkgfrfnptDEELIQILESkvsgqqmplHFSFIVErnlyelepqqlqslpenerycycmrendsrevsgrgwwKATSHVKKIyatnnngscadvigykrpltfhkfknngrnrsnaiktNWIMHEYTLHslstdwtlckikykgkpsvqEELEDIRNDYRLRvnndfeasssssisvTNMDMQQHLADSVAEQQLQrqqqqpqplqqleqqqqyasydpfstqtmstgydyfndhdhqleqahTSEQLFTTLWSWQ
Flexible Loop (DISEMBL)
mmmvpkgfrfnpTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYCYCMREndsrevsgrgWWKATSHVKKiyatnnngscaDVIGYKRPLTfhkfknngrnrsnaiKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSSSSISVTNMDMQQHLADSVAEQQLQRQQQQPQPLQQLEQQQQYASYDPFSTQTMSTGYDYFNDHDHQLEQAHTSEQLFTTLWSWQ
Low Complexity Region (SEG)
MMMVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYCYCMRENDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSSSSISVTNMDMQQHLADSVAeqqlqrqqqqpqplqqleqqqqYASYDPFSTQTMSTGYDYFNDHDHQLEQAHTSEQLFTTLWSWQ
Disordered region (IsUnstruct)
****************LIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYCYCMRENDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGK**********************************************************************************GYDYFN*************QLFTTLW***
Disordered Region (DISOPRED)
MMMVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYCYCMRENDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSLSTDWTLCKIKY***********************************************************************************************************T******
Disordered Region (DISEMBL)
MMMVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYCYCMRENDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSSSSISVTNMDMQQHLADS************************YASYDPFSTQTMSTGYDYFNDHDHQLEQAHTSEQLFTTLWSWQ
Disordered Region (DISPRO)
*MMVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYCYCMRENDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGK***************************************************************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MMMVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYCYCMRENDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSSSSISVTNMDMQQHLADSVAEQQLQRQQQQPQPLQQLEQQQQYASYDPFSTQTMSTGYDYFNDHDHQLEQAHTSEQLFTTLWSWQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	260	2.2.26 [Sep-21-2011]
Q93VY3	297	NAC domain-containing pro	no	no	0.492	0.430	0.398	7e-16
A2YMR0	425	NAC transcription factor	N/A	no	0.719	0.44	0.293	8e-16
Q9FIW5	337	Putative NAC domain-conta	no	no	0.473	0.364	0.368	1e-15
A0SPJ6	396	NAC transcription factor	N/A	no	0.515	0.338	0.329	3e-15
A0SPJ3	405	NAC transcription factor	N/A	no	0.526	0.338	0.324	3e-15
A0SPJ8	406	NAC transcription factor	N/A	no	0.523	0.334	0.325	3e-15
D2SMN4	406	NAC transcription factor	N/A	no	0.523	0.334	0.325	3e-15
Q9C932	317	NAC domain-containing pro	no	no	0.55	0.451	0.371	3e-15
Q8GY42	323	NAC transcription factor	no	no	0.553	0.445	0.340	4e-15
A0SPJ9	402	NAC transcription factor	N/A	no	0.515	0.333	0.329	6e-15

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score = 84.3 bits (207), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 81/163 (49%), Gaps = 35/163 (21%)

Query: 2   MMVPKGFRFNPTDEE-LIQILESKVSGQQMPLHFSF--IVERNLYELEPQQLQS---LPE 55
           + +P GFRF PTDEE L+Q L  KV+G     HFS   I + +LY+ +P  L S     E
Sbjct: 12  LSLPPGFRFYPTDEELLVQYLCRKVAG----YHFSLQVIGDIDLYKFDPWDLPSKALFGE 67

Query: 56  NERYCYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHK 109
            E Y +  R+    N SR   V+G G+WKAT   K I A          +G K+ L F+ 
Sbjct: 68  KEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRR------VGIKKALVFYA 121

Query: 110 FKNNGRNRSNAIKTNWIMHEYTL--HSLS------TDWTLCKI 144
            K          KTNWIMHEY L  HS S       DW LC+I
Sbjct: 122 GKA-----PKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRI 159

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.
Arabidopsis thaliana (taxid: 3702)

>sp|A2YMR0|NAC10_ORYSI NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica GN=ONAC010 PE=3 SV=1

 Score = 84.3 bits (207), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 103/215 (47%), Gaps = 28/215 (13%)

Query: 4   VPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPENERY 59
           +P GFRF+PTDEEL +  L+ K +   +PL  + I E +LY+ +P +L    +  E E Y
Sbjct: 29  LPPGFRFHPTDEELVVHYLKKKAA--SVPLPVTIIAEVDLYKFDPWELPEKANFGEQEWY 86

Query: 60  CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  R+    N +R    +  G+WKAT   K I A+   GS  + +G K+ L F++ K  
Sbjct: 87  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMAS---GSTREKVGVKKALVFYRGKP- 142

Query: 114 GRNRSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNN---- 169
                  +KTNWIMHEY L   S+         +  P +       R    LR+++    
Sbjct: 143 ----PKGVKTNWIMHEYRLTDTSSSAAAVATTRQPPPPIT---GGSRGAVSLRLDDWVLC 195

Query: 170 -DFEASSSSSISVTNMDMQQHLADSVAEQQLQRQQ 203
             ++ ++ +     +M+ +  + D+VA      QQ
Sbjct: 196 RIYKKTNKAGAGQRSMECEDSVEDAVAAYAPSSQQ 230

Transcription factor of the NAC family associated with male fertility.

Oryza sativa subsp. indica (taxid: 39946)

>sp|Q9FIW5|NAC94_ARATH Putative NAC domain-containing protein 94 OS=Arabidopsis thaliana GN=ANAC094 PE=4 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 82/144 (56%), Gaps = 21/144 (14%)

Query: 3   MVPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEP---QQLQSLPENER 58
           +V  GFRF+PTDEEL+   L+ KV  + +P  F  I + ++Y+ +P    +L ++ E E 
Sbjct: 19  VVLPGFRFHPTDEELVSFYLKRKVLHKSLP--FDLIKKVDIYKYDPWDLPKLAAMGEKEW 76

Query: 59  YCYCMRENDSR------EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKN 112
           Y YC R+   R       V+G G+WKAT   + IY+ ++       IG K+ L F++   
Sbjct: 77  YFYCPRDRKYRNSTRPNRVTGGGFWKATGTDRPIYSLDS----TRCIGLKKSLVFYR--- 129

Query: 113 NGRNRSNAIKTNWIMHEYTLHSLS 136
            GR  +  +KT+W+MHE+ L SLS
Sbjct: 130 -GR-AAKGVKTDWMMHEFRLPSLS 151

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 42/176 (23%)

Query: 4   VPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPENERY 59
           +P GFRF+PTDEEL +  L+ K +  ++PL  + I E +LY+ +P +L    +  E E Y
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAA--KVPLPVTIITEVDLYKFDPWELPEKATFGEQEWY 85

Query: 60  CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  R+    N +R    +  G+WKAT   K I A+   G   + +G K+ L F++ K  
Sbjct: 86  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILAS---GCGREKVGVKKALVFYRGK-- 140

Query: 114 GRNRSNAIKTNWIMHEYTLHSLST----------------------DWTLCKIKYK 147
                  +KTNWIMHEY L   S+                      DW LC+I  K
Sbjct: 141 ---PPKGLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLCRIYKK 193

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

>sp|A0SPJ3|NAMA1_TRIDB NAC transcription factor NAM-A1 OS=Triticum durum GN=NAM-A1 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/179 (32%), Positives = 85/179 (47%), Gaps = 42/179 (23%)

Query: 4   VPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPENERY 59
           +P GFRF+PTDEEL +  L+ K +  ++PL  + I E +LY+ +P +L    +  E E Y
Sbjct: 33  LPPGFRFHPTDEELVVHYLKKKAA--KVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWY 90

Query: 60  CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNN-GSCADVIGYKRPLTFHKFKN 112
            +  R+    N +R    +  G+WKAT   K I A+    G   + +G K+ L F++ K 
Sbjct: 91  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGTGCGLVREKLGVKKALVFYRGKP 150

Query: 113 NGRNRSNAIKTNWIMHEYTLHSLST------------------------DWTLCKIKYK 147
                   +KTNWIMHEY L  +S                         DW LC+I  K
Sbjct: 151 -----PKGLKTNWIMHEYRLTDVSGSTTTSRPPPPVTGGSRAAASLRLDDWVLCRIYKK 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-B2) and one extra pseudogene (NAM-B1) (PubMed:17124321).

Triticum durum (taxid: 4567)

>sp|A0SPJ8|NAM1_HORVD NAC transcription factor NAM-1 OS=Hordeum vulgare var. distichum GN=NAM-1 PE=4 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 84/178 (47%), Gaps = 42/178 (23%)

Query: 4   VPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPENERY 59
           +P GFRF+PTDEEL +  L+ K +  + PL  + I E +LY+ +P +L    +  E+E Y
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAA--KAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWY 92

Query: 60  CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  R+    N +R    +  G+WKAT   K I A+   G   + +G K+ L F++ K  
Sbjct: 93  FFSPRDRKYANGARPNRAATSGYWKATGTDKPILAS-ATGCGREKVGVKKALVFYRGKP- 150

Query: 114 GRNRSNAIKTNWIMHEYTLHSLST------------------------DWTLCKIKYK 147
                  +KTNWIMHEY L   S                         DW LC+I  K
Sbjct: 151 ----PRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKK 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

>sp|D2SMN4|NAMB1_HORVS NAC transcription factor NAM-B1 OS=Hordeum vulgare subsp. spontaneum GN=NAM-B1 PE=4 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 84/178 (47%), Gaps = 42/178 (23%)

Query: 4   VPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPENERY 59
           +P GFRF+PTDEEL +  L+ K +  + PL  + I E +LY+ +P +L    +  E+E Y
Sbjct: 35  LPPGFRFHPTDEELVVHYLKKKAA--KAPLPVTIIAEVDLYKFDPWELPEKATFGEHEWY 92

Query: 60  CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  R+    N +R    +  G+WKAT   K I A+   G   + +G K+ L F++ K  
Sbjct: 93  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILAS-ATGCGREKVGVKKALVFYRGKP- 150

Query: 114 GRNRSNAIKTNWIMHEYTLHSLST------------------------DWTLCKIKYK 147
                  +KTNWIMHEY L   S                         DW LC+I  K
Sbjct: 151 ----PRGLKTNWIMHEYRLTGASAGSTTTSRPPPVTGGSRAPASLRLDDWVLCRIYKK 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Sequences of the 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare subsp. spontaneum (taxid: 77009)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/175 (37%), Positives = 86/175 (49%), Gaps = 32/175 (18%)

Query: 2   MMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENE 57
           + +P GFRF PTDEEL +Q L  K +G    L    I E +LY+ +P  L +     E E
Sbjct: 12  LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYKFDPWVLPNKALFGEKE 69

Query: 58  RYCYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
            Y +  R+    N SR   V+G G+WKAT    KI +T         +G K+ L F+  K
Sbjct: 70  WYFFSPRDRKYPNGSRPNRVAGSGYWKATG-TDKIISTE-----GQRVGIKKALVFYIGK 123

Query: 112 NNGRNRSNAIKTNWIMHEYTLHSLS--------TDWTLCKIKYKGKPSVQEELED 158
                     KTNWIMHEY L   S         DW LC+I YK + S Q+++ D
Sbjct: 124 -----APKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRI-YKKQSSAQKQVYD 172

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GY42|NAC25_ARATH NAC transcription factor 25 OS=Arabidopsis thaliana GN=NAC025 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 89/185 (48%), Gaps = 41/185 (22%)

Query: 4   VPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPENERYC 60
           +P GFRF+PTDEEL+ +   K     +PL  S I E +LY+ +P +L    S  E+E Y 
Sbjct: 16  LPPGFRFHPTDEELV-VHYLKKKADSVPLPVSIIAEIDLYKFDPWELPSKASFGEHEWYF 74

Query: 61  YCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNG 114
           +  R+    N  R    +  G+WKAT   K I+  N++      +G K+ L F+     G
Sbjct: 75  FSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHK-----VGVKKALVFY-----G 124

Query: 115 RNRSNAIKTNWIMHEYTL--HSLST------------------DWTLCKIKYKGKPSVQE 154
                 IKT+WIMHEY L   +LST                  DW LC+I YK   S + 
Sbjct: 125 GKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRI-YKKNSSQRP 183

Query: 155 ELEDI 159
            +E +
Sbjct: 184 TMERV 188

Transcription factor of the NAC family. May be associated with anther development and pollen production.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ9|NAM2_HORVD NAC transcription factor NAM-2 OS=Hordeum vulgare var. distichum GN=NAM-2 PE=4 SV=1

 Score = 81.3 bits (199), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 42/176 (23%)

Query: 4   VPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPENERY 59
           +P GFRF+PTDEEL +  L+ K +  ++PL  + I E +LY+ +P +L    +  E E Y
Sbjct: 28  LPPGFRFHPTDEELVVHYLKKKAA--KVPLPVTIIAEVDLYKFDPWELPEKATFGEQEWY 85

Query: 60  CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  R+    N +R    +  G+WKAT   K I A+   G   + +G K  L F++ K  
Sbjct: 86  FFSPRDRKYPNGARPNRAATSGYWKATGTDKPILAS---GCGREKVGVKXALVFYRGK-- 140

Query: 114 GRNRSNAIKTNWIMHEYTLHSLST----------------------DWTLCKIKYK 147
                  +KTNWIMHEY L   S+                      DW LC+I  K
Sbjct: 141 ---PPKGLKTNWIMHEYRLTDASSSAATSRPPPVTGGSRAASLRLDDWVLCRIYKK 193

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. Sequences of 11 European varieties of H.vulgare tested belongs to the same haplotype while the sequence found in H.spontaneum, an ancestor of the cultivated H.vulgare which has a higher GPC, belongs to an other haplotype.

Hordeum vulgare var. distichum (taxid: 112509)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
224095696	259	NAC domain protein, IPR003441 [Populus t	0.953	0.957	0.533	6e-64
224133118	254	NAC domain protein, IPR003441 [Populus t	0.896	0.917	0.507	1e-61
224132704	254	NAC domain protein, IPR003441 [Populus t	0.896	0.917	0.507	9e-61
255587058	251	NAC domain-containing protein, putative	0.861	0.892	0.474	1e-54
255562844	411	NAC domain-containing protein, putative	0.55	0.347	0.351	3e-16
357486931	391	NAC domain protein [Medicago truncatula]	0.680	0.452	0.327	4e-16
356498703	354	PREDICTED: NAC domain-containing protein	0.565	0.415	0.357	7e-16
351724343	229	NAC domain protein [Glycine max] gi|1879	0.653	0.742	0.331	8e-16
297823143	258	hypothetical protein ARALYDRAFT_482294 [	0.515	0.519	0.364	1e-15
356502539	442	PREDICTED: protein FEZ-like [Glycine max	0.55	0.323	0.342	1e-15

>gi|224095696|ref|XP_002310439.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222853342|gb|EEE90889.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  249 bits (637), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 142/266 (53%), Positives = 176/266 (66%), Gaps = 18/266 (6%)

Query: 3   MVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQ-----SLPENE 57
           MVP GFRFNPTDEELIQ+L+ K SGQ+MPLHF  I+E N+YE EPQ L+     +L   E
Sbjct: 1   MVPHGFRFNPTDEELIQVLDRKASGQEMPLHF--ILEMNVYEREPQDLEWNQSTALSNGE 58

Query: 58  RYCYCMRE-NDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRN 116
           R+ YC RE NDSREV GRGWWKATSHVKK+YA ++      ++G KRPLTFH+FK+N RN
Sbjct: 59  RFYYCKREINDSREVIGRGWWKATSHVKKVYANDHQL----LVGNKRPLTFHRFKDNERN 114

Query: 117 RSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSS 176
           R+NAIKTNWIMHEY+L S +T+W LCKIKYKGKPS+QEE+E I+  +  R  NDFEA SS
Sbjct: 115 RNNAIKTNWIMHEYSLESRTTEWRLCKIKYKGKPSLQEEIESIKKQHSSR--NDFEAGSS 172

Query: 177 SSISVTNMDMQQHL-ADSVAE-QQLQRQQQQPQPLQQLEQQQQYASYDPFSTQTMSTGYD 234
           +++ V   + Q  + ADS           QQP       QQ   + Y P     + TG  
Sbjct: 173 TNVGVEQHEEQTLVPADSTMPLDHYNGYDQQPHDQWNNMQQLPPSPYHPNYLPALCTGSG 232

Query: 235 -YFNDHDHQLEQAHTSEQLFTTLWSW 259
            Y+ +   +LE A   EQ F +LWSW
Sbjct: 233 HYYVNQQEELEPA-VHEQPFPSLWSW 257

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224133118|ref|XP_002327965.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|224133122|ref|XP_002327966.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222837374|gb|EEE75753.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222837375|gb|EEE75754.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  242 bits (618), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/276 (50%), Positives = 175/276 (63%), Gaps = 43/276 (15%)

Query: 3   MVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQ-----SLPENE 57
           MVP GFRFNPTDEELIQ+L+ K SGQ+MPLHF  I+ERN+YE EPQ L+      L   E
Sbjct: 1   MVPHGFRFNPTDEELIQVLDRKASGQEMPLHF--ILERNVYEREPQDLEWNQTAPLSNGE 58

Query: 58  RYCYCMRE-NDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRN 116
           RY YC RE N SREV GRGWWKATSHVKKI+A N++     ++G KRPL FH+FK+N RN
Sbjct: 59  RYYYCTRETNYSREVLGRGWWKATSHVKKIHANNDD---QLLVGNKRPLKFHRFKDNERN 115

Query: 117 RSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSS 176
           R+NA+KTNWIM+EY+L S +TDW LCKIK+KGKPSVQEE+E +R  Y  R  NDFEA SS
Sbjct: 116 RNNAVKTNWIMYEYSLESRTTDWRLCKIKHKGKPSVQEEMESMREQYSSR--NDFEAGSS 173

Query: 177 SSISVTNMDMQQHLADSVAEQQLQRQQQQPQPLQQLEQQQQY-----------ASYDPF- 224
           ++               V  QQ Q Q   P   +  +  Q Y           + YDP  
Sbjct: 174 TNF--------------VGGQQQQEQTSLPTNYEGYDHHQSYYQWNNMQQSPPSPYDPSL 219

Query: 225 -STQTMSTGYDYFNDHDHQLEQAHTSEQLFTTLWSW 259
            +  + S+G+ Y+ +   +LE +   E  F +LWSW
Sbjct: 220 PAPPSTSSGH-YYVEQQEKLEPS--DEHPFPSLWSW 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224132704|ref|XP_002327860.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222837269|gb|EEE75648.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  239 bits (610), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 140/276 (50%), Positives = 175/276 (63%), Gaps = 43/276 (15%)

Query: 3   MVPKGFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQ-----SLPENE 57
           MVP GFRFNPTDEELIQ L+ K SGQ+MPLHF  I+E N+YE EPQ L+      L   E
Sbjct: 1   MVPHGFRFNPTDEELIQFLDRKASGQEMPLHF--ILETNVYEREPQDLEWNQTTPLSNGE 58

Query: 58  RYCYCMRE-NDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRN 116
           RY YC RE N SREV GRGWWKATSHVKKI+A N++     ++G KRPLTFH+FK+N RN
Sbjct: 59  RYYYCTREINYSREVLGRGWWKATSHVKKIHANNDD---QLLVGNKRPLTFHRFKDNERN 115

Query: 117 RSNAIKTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSS 176
           R+NA+KTNWIM+EY+L S +T W LCKIK+KGKPSVQEE+E +R  Y  R  NDFEA SS
Sbjct: 116 RNNAVKTNWIMYEYSLESRTTLWKLCKIKHKGKPSVQEEMESMREQYSSR--NDFEAGSS 173

Query: 177 SSISVTNMDMQQHLADSVAEQQLQRQQQQPQPLQQLEQQQQY-----------ASYDPF- 224
           ++               V  QQ Q Q   P   +  +Q Q Y           + YDP+ 
Sbjct: 174 TNF--------------VGGQQQQEQTILPTNYEGYDQHQSYYQWNNMQQLPPSPYDPYL 219

Query: 225 -STQTMSTGYDYFNDHDHQLEQAHTSEQLFTTLWSW 259
            +  + S+G+ Y+ +   +LE +   E  F +LWSW
Sbjct: 220 PAPPSTSSGH-YYVEQQEKLEPS--DEHPFPSLWSW 252

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255587058|ref|XP_002534118.1| NAC domain-containing protein, putative [Ricinus communis] gi|223525830|gb|EEF28269.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/274 (47%), Positives = 158/274 (57%), Gaps = 50/274 (18%)

Query: 7   GFRFNPTDEELIQILESKVSGQQMPLHFSFIVERNLYELEPQQLQ-----SLPENERYCY 61
           GFRFNPTDEELI+IL+ K S Q+MPL   FIV  NLY+ EPQ L+     SL  NERY  
Sbjct: 7   GFRFNPTDEELIKILDRKASEQEMPL--EFIVHTNLYDQEPQHLEWNDNPSLGNNERYYC 64

Query: 62  CMRENDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAI 121
           C RENDSREV+GRGWWKATSHVKKIY          ++G KRPLTFH++++N RNR NAI
Sbjct: 65  CKRENDSREVAGRGWWKATSHVKKIYVN------VVLVGCKRPLTFHRYRDNDRNRKNAI 118

Query: 122 KTNWIMHEYTLHSLSTDWTLCKIKYKGKPSVQEELEDIRNDYRLRVNNDFEASSSSSISV 181
           KTNWIMHEY+L S  T+W LCKI +KGKPS+ EE+E+IR          FEA+ SS    
Sbjct: 119 KTNWIMHEYSLESKITEWRLCKIIHKGKPSIHEEMENIR--------QHFEAAGSS---- 166

Query: 182 TNMDMQQHLADSVAEQQLQRQQQQPQPLQ---------------QLEQQQQYASYDPFST 226
                     DS    + +R QQ+  P                  L+Q  Q     P+  
Sbjct: 167 ---------VDSQLGSERERAQQECSPALPAVNSTMPSYSQYYWHLQQFPQSPYRIPYHQ 217

Query: 227 QTMSTGYDYFNDHDHQLEQAHTSEQLFTTLWSWQ 260
              STGY YFN+      +  + EQ   +LW WQ
Sbjct: 218 NLESTGY-YFNEQQGLSLEPSSEEQFGGSLWPWQ 250

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255562844|ref|XP_002522427.1| NAC domain-containing protein, putative [Ricinus communis] gi|223538312|gb|EEF39919.1| NAC domain-containing protein, putative [Ricinus communis]

 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 91/182 (50%), Gaps = 39/182 (21%)

Query: 2   MMVPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQLQSLP---ENE 57
           +M+P GFRF+PTDEEL+   L+ K+  QQ PL    I + ++Y+ +P  L  L    E E
Sbjct: 13  VMLP-GFRFHPTDEELVGFYLKRKI--QQRPLSIELIKQLDIYKYDPWDLPKLATTGEKE 69

Query: 58  RYCYCMRENDSR------EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
            Y YC R+   R       V+G G+WKAT   + IY++  N      IG K+ L F+K  
Sbjct: 70  WYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGN----KCIGLKKSLVFYK-- 123

Query: 112 NNGRNRSNAIKTNWIMHEYTLHSLS-----------------TDWTLCKIKYKGKPSVQE 154
             GR  +  IKT+W+MHE+ L SL+                   W +C+I  K   + Q 
Sbjct: 124 --GR-AAKGIKTDWMMHEFRLPSLTDSASPAKRFLDKTIPVNDSWAICRIFKKTNSTAQR 180

Query: 155 EL 156
            L
Sbjct: 181 AL 182

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357486931|ref|XP_003613753.1| NAC domain protein [Medicago truncatula] gi|355515088|gb|AES96711.1| NAC domain protein [Medicago truncatula]

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 104/223 (46%), Gaps = 46/223 (20%)

Query: 3   MVPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPENER 58
           ++  GFRF+PTDEEL+   L+ KV  QQ PL    I + ++Y+ +P  L    S  E E 
Sbjct: 13  VILPGFRFHPTDEELVGFYLKRKV--QQRPLSIELIKQLDIYKYDPWDLPKFASTGEKEW 70

Query: 59  YCYCMRENDSR------EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKN 112
           Y YC R+   R       V+G G+WKAT   K IY++      +  IG K+ L F+K   
Sbjct: 71  YFYCPRDRKYRNSARPNRVTGAGFWKATGTDKPIYSSEG----SKCIGLKKSLVFYK--- 123

Query: 113 NGRNRSNAIKTNWIMHEYTLHSL----------------STDWTLCKIKYKGKPSVQ--- 153
            GR  +  IKT+W+MHE+ L SL                +  W +C+I  K   + Q   
Sbjct: 124 -GR-AAKGIKTDWMMHEFRLPSLIDPLSPKKYLEKTIPANESWAICRIFKKTNSTAQRAL 181

Query: 154 -----EELEDIRNDYRLRVNNDFEASSSSSISVT-NMDMQQHL 190
                  L + R    L  N +     SS+IS+T N  +  H 
Sbjct: 182 SHSWVSSLSETRTSNMLTKNQEITQFCSSNISLTKNTSLANHF 224

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356498703|ref|XP_003518189.1| PREDICTED: NAC domain-containing protein 29-like [Glycine max]

 Score = 90.5 bits (223), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 86/176 (48%), Gaps = 29/176 (16%)

Query: 4   VPKGFRFNPTDEELI-QILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENERY 59
           +P GFRF+PTDEELI   L  KV+   +PL  S I E ++Y+ +P +L +     E E Y
Sbjct: 9   LPPGFRFHPTDEELILHYLRKKVAS--IPLPVSIIAEVDIYKFDPWELPAKAEFGEKEWY 66

Query: 60  CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  R+    N +R    +  G+WKAT   K I A+   G   +  G K+ L F+K    
Sbjct: 67  FFSPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLPGGGVREHFGVKKALVFYK---- 122

Query: 114 GRNRSNAIKTNWIMHEYTLHSLS------------TDWTLCKIKYKGKPSVQEELE 157
           GR     +KTNWIMHEY     +             DW LC+I  K K +V    E
Sbjct: 123 GR-PPKGVKTNWIMHEYRFVDTNRPIRIKDTSMRLDDWVLCRIYKKTKHAVSPTTE 177

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724343|ref|NP_001238078.1| NAC domain protein [Glycine max] gi|187940283|gb|ACD39372.1| NAC domain protein [Glycine max]

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 32/202 (15%)

Query: 2   MMVPKGFRFNPTDEELI-QILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERYC 60
           + +P GFRF+PTDEEL+ Q L+ KV     PL  S I E ++ + +P  L    E ERY 
Sbjct: 12  LRLPPGFRFHPTDEELVLQYLKRKVF--SCPLPASIIPEVDVCKSDPWDLPGDLEQERYF 69

Query: 61  YCMRE------NDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNG 114
           +  +E      N S   +  G+WKAT   K+I  +  N     V+G K+ L F++ K   
Sbjct: 70  FSTKEAKYPNGNRSNRATNSGYWKATGLDKQIVTSKGN----QVVGMKKTLVFYRGK--- 122

Query: 115 RNRSNAIKTNWIMHEYTLHSLST--------DWTLCKIKYKGKPSVQ--EELEDIRND-- 162
               +  +T+WIMHEY L+ L+         +W LC+I  K +   +  EE   +RN   
Sbjct: 123 --PPHGSRTDWIMHEYRLNILNASQSHVPMENWVLCRIFLKKRSGAKNGEESNKVRNSKV 180

Query: 163 --YRLRVNNDFEASSSSSISVT 182
             Y     N  ++SSS++  +T
Sbjct: 181 VFYDFLAQNKTDSSSSAASGIT 202

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297823143|ref|XP_002879454.1| hypothetical protein ARALYDRAFT_482294 [Arabidopsis lyrata subsp. lyrata] gi|297325293|gb|EFH55713.1| hypothetical protein ARALYDRAFT_482294 [Arabidopsis lyrata subsp. lyrata]

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 86/162 (53%), Gaps = 28/162 (17%)

Query: 1   MMMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERY 59
           ++ +P GFRF+PTDEEL +Q L  KV+G  +PL  S I E ++ + +P  L    E+ERY
Sbjct: 12  VLRLPPGFRFHPTDEELVVQYLRRKVTG--LPLPASVIPETDVCKSDPWDLPGDCESERY 69

Query: 60  CYCMRE------NDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  RE      N S   +G G+WKAT   K+I      G    V+G K+ L F+K K  
Sbjct: 70  FFSTREAKYPNGNRSNRSTGSGYWKATGIDKQI------GKKKLVVGMKKTLVFYKGKP- 122

Query: 114 GRNRSNAIKTNWIMHEYTL--------HSLSTDWTLCKIKYK 147
                N  +TNW++HEY L        +  + +W LC++  K
Sbjct: 123 ----PNGTRTNWVLHEYRLVDSQQESSYGQNMNWVLCRVFLK 160

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356502539|ref|XP_003520076.1| PREDICTED: protein FEZ-like [Glycine max]

 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 91/181 (50%), Gaps = 38/181 (20%)

Query: 2   MMVPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQLQSLP---ENE 57
           +M+P GFRF+PTDEEL+   L+ K+  QQ PL    I + ++Y+ +P  L  L    E E
Sbjct: 17  VMLP-GFRFHPTDEELVGFYLKRKI--QQRPLTIELIKQLDIYKFDPWDLPKLATTGEKE 73

Query: 58  RYCYCMRENDSR------EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
            Y YC R+   R       V+G G+WKAT   + IY++      +  IG K+ L F+K  
Sbjct: 74  WYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEG----SKCIGLKKSLVFYK-- 127

Query: 112 NNGRNRSNAIKTNWIMHEYTLHSLST----------------DWTLCKIKYKGKPSVQEE 155
             GR  +  +KT+W+MHE+ L SL+                  W +C+I  K   + Q  
Sbjct: 128 --GR-AAKGVKTDWMMHEFRLPSLTDSLSPKYIDKITIPANESWAICRIFKKTNATAQRA 184

Query: 156 L 156
           L
Sbjct: 185 L 185

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	260
TAIR|locus:2179877	252	NAC083 "NAC domain containing	0.653	0.674	0.343	1.5e-19
TAIR|locus:2051053	268	NAC041 "NAC domain containing	0.634	0.615	0.318	2.8e-18
TAIR|locus:2202820	418	FEZ "FEZ" [Arabidopsis thalian	0.473	0.294	0.406	1.7e-17
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.626	0.514	0.370	2e-17
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.623	0.511	0.364	4.1e-17
TAIR|locus:2007166	268	NAP "NAC-like, activated by AP	0.561	0.544	0.357	4.7e-16
TAIR|locus:2202028	395	NAC007 "NAC 007" [Arabidopsis	0.526	0.346	0.331	1.4e-15
TAIR|locus:2095908	359	NAC047 "NAC domain containing	0.480	0.348	0.402	3.5e-15
TAIR|locus:2142285	292	NAC096 "NAC domain containing	0.565	0.503	0.333	7.3e-15
TAIR|locus:2020123	301	NAC020 "NAC domain containing	0.5	0.431	0.362	9.1e-15

TAIR|locus:2179877 NAC083 "NAC domain containing protein 83" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
 Identities = 68/198 (34%), Positives = 100/198 (50%)

Query:     1 MMMVPKGFRFNPTDEELI-QILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERY 59
             ++ +P GFRF+PTDEEL+ Q L+ KV    +P   S I E ++   +P  L    E ERY
Sbjct:    11 VLRLPPGFRFHPTDEELVVQYLKRKVCSSPLPA--SIIPEFDVCRADPWDLPGNLEKERY 68

Query:    60 CYCMRE------NDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
              +  RE      N S   +G G+WKAT   K++  +  N     ++G K+ L F+K K  
Sbjct:    69 FFSTREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGN----QIVGLKKTLVFYKGKPP 124

Query:   114 GRNRSNAIKTNWIMHEYTLHSL-------STDWTLCKIKYKGKPSVQEELEDIRNDYR-L 165
               +R     T+WIMHEY L S        + +W LC+I  K +   + + +D   D R L
Sbjct:   125 HGSR-----TDWIMHEYRLSSSPPSSMGPTQNWVLCRIFLKKRAGNKNDDDD--GDSRNL 177

Query:   166 RVNNDFEASSSSSISVTN 183
             R NN+  +S    I  T+
Sbjct:   178 RHNNNNNSSDQIEIITTD 195

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0010089 "xylem development" evidence=RCA;IMP

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0009651 "response to salt stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

GO:0010150 "leaf senescence" evidence=IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

TAIR|locus:2051053 NAC041 "NAC domain containing protein 41" [Arabidopsis thaliana (taxid:3702)]

 Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
 Identities = 63/198 (31%), Positives = 100/198 (50%)

Query:     1 MMMVPKGFRFNPTDEELI-QILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLPENERY 59
             ++ +P GFRF+PTDEEL+ Q L  KV+G  +PL  S I E ++ + +P  L    E+E Y
Sbjct:    12 VLRLPPGFRFHPTDEELVVQYLRRKVTG--LPLPASVIPETDVCKSDPWDLPGDCESEMY 69

Query:    60 CYCMRE------NDSREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
              +  RE      N S   +G G+WKAT   K+I      G    V+G K+ L F+K K  
Sbjct:    70 FFSTREAKYPNGNRSNRSTGSGYWKATGLDKQI------GKKKLVVGMKKTLVFYKGKP- 122

Query:   114 GRNRSNAIKTNWIMHEY--------TLHSLSTDWTLCKIKYKGKPSV-----QEELEDIR 160
                  N  +TNW++HEY        +L+  + +W LC++  K + +      ++E E++ 
Sbjct:   123 ----PNGTRTNWVLHEYRLVDSQQDSLYGQNMNWVLCRVFLKKRSNSNSKRKEDEKEEVE 178

Query:   161 NDYRLRVNNDFEASSSSS 178
             N+       + E  +  S
Sbjct:   179 NEKETETEREREEENKKS 196

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2202820 FEZ "FEZ" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 59/145 (40%), Positives = 83/145 (57%)

Query:     2 MMVPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQLQSLP---ENE 57
             +++P GFRF+PTDEEL+   L+ KV  Q  PL    I + ++Y+ +P  L       E E
Sbjct:    15 VLLP-GFRFHPTDEELVSFYLKRKV--QHNPLSIELIRQLDIYKYDPWDLPKFAMTGEKE 71

Query:    58 RYCYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
              Y YC R+    N SR   V+G G+WKAT   + IY++  N  C   IG K+ L F+K  
Sbjct:    72 WYFYCPRDRKYRNSSRPNRVTGAGFWKATGTDRPIYSSEGN-KC---IGLKKSLVFYK-- 125

Query:   112 NNGRNRSNAIKTNWIMHEYTLHSLS 136
               GR  +  +KT+W+MHE+ L SLS
Sbjct:   126 --GR-AAKGVKTDWMMHEFRLPSLS 147

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0045770 "positive regulation of asymmetric cell division" evidence=IMP

GO:0048103 "somatic stem cell division" evidence=IMP

GO:0048829 "root cap development" evidence=IMP

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 73/197 (37%), Positives = 96/197 (48%)

Query:     2 MMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENE 57
             + +P GFRF PTDEEL +Q L  K +G    L    I E +LY+ +P  L +     E E
Sbjct:    12 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQL--IAEIDLYKFDPWVLPNKALFGEKE 69

Query:    58 RYCYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
              Y +  R+    N SR   V+G G+WKAT    KI +T         +G K+ L F+  K
Sbjct:    70 WYFFSPRDRKYPNGSRPNRVAGSGYWKATG-TDKIISTEGQR-----VGIKKALVFYIGK 123

Query:   112 NNGRNRSNAIKTNWIMHEYTL-----HSLST---DWTLCKIKYKGKPSVQEELED--IRN 161
                       KTNWIMHEY L      + ST   DW LC+I YK + S Q+++ D  I N
Sbjct:   124 -----APKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRI-YKKQSSAQKQVYDNGIAN 177

Query:   162 DYRLRVNNDFEASSSSS 178
                   N     +SSSS
Sbjct:   178 AREFSNNGTSSTTSSSS 194

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 71/195 (36%), Positives = 95/195 (48%)

Query:     2 MMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENE 57
             + +P GFRF PTDEEL ++ L  K +G    L    I E +LY+ +P  L S     E E
Sbjct:    12 LSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQL--IAEIDLYKFDPWVLPSKALFGEKE 69

Query:    58 RYCYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
              Y +  R+    N SR   V+G G+WKAT    K+ +T         +G K+ L F+  K
Sbjct:    70 WYFFSPRDRKYPNGSRPNRVAGSGYWKATG-TDKVISTEGRR-----VGIKKALVFYIGK 123

Query:   112 NNGRNRSNAIKTNWIMHEYTL-----HSLST---DWTLCKIKYKGKPSVQEEL-EDIRND 162
                       KTNWIMHEY L      + ST   DW LC+I YK + S Q++   ++   
Sbjct:   124 -----APKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRI-YKKQTSAQKQAYNNLMTS 177

Query:   163 YRLRVNNDFEASSSS 177
              R   NN    SSSS
Sbjct:   178 GREYSNNGSSTSSSS 192

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2007166 NAP "NAC-like, activated by AP3/PI" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 65/182 (35%), Positives = 92/182 (50%)

Query:     4 VPKGFRFNPTDEELI-QILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENERY 59
             +P GFRF+PTDEELI   L ++   +  P+  S I E ++Y+ +P QL       ENE Y
Sbjct:     9 LPPGFRFHPTDEELIVYYLRNQTMSKPCPV--SIIPEVDIYKFDPWQLPEKTEFGENEWY 66

Query:    60 CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
              +  RE    N  R    +  G+WKAT   K I++ ++N      +G K+ L F+K    
Sbjct:    67 FFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSN------VGVKKALVFYK---- 116

Query:   114 GRNRSNAIKTNWIMHEYTLHS---LST---------DWTLCKI-KYKGKPSVQEELEDIR 160
             GR     IKT+WIMHEY LH     ST         +W LC+I K +G   +  E E   
Sbjct:   117 GRP-PKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKRGASKLLNEQEGFM 175

Query:   161 ND 162
             ++
Sbjct:   176 DE 177

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010150 "leaf senescence" evidence=IMP

GO:0009617 "response to bacterium" evidence=RCA

GO:0045087 "innate immune response" evidence=RCA

GO:0009825 "multidimensional cell growth" evidence=IMP

GO:0009908 "flower development" evidence=IMP

TAIR|locus:2202028 NAC007 "NAC 007" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
 Identities = 56/169 (33%), Positives = 85/169 (50%)

Query:     4 VPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQLQSL----PENER 58
             VP GFRF+PTDEEL+   L  KV+ +++ +   FI + +LY++EP  LQ L     E + 
Sbjct:     7 VPPGFRFHPTDEELVDYYLRKKVASKRIEI--DFIKDIDLYKIEPWDLQELCKIGHEEQS 64

Query:    59 YCYCMRENDSREVSGR--------GWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKF 110
               Y     D +  +G         G+WKAT   K IY  ++      +IG ++ L F+K 
Sbjct:    65 DWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAIYLRHS------LIGMRKTLVFYK- 117

Query:   111 KNNGRNRSNAIKTNWIMHEYTLHS------LSTDWTLCKIKYKGKPSVQ 153
                GR   N  K++WIMHEY L +          W +C++  K   +V+
Sbjct:   118 ---GR-APNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRLAAVR 162

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2095908 NAC047 "NAC domain containing protein 47" [Arabidopsis thaliana (taxid:3702)]

 Score = 196 (74.1 bits), Expect = 3.5e-15, P = 3.5e-15
 Identities = 58/144 (40%), Positives = 77/144 (53%)

Query:     4 VPKGFRFNPTDEELI-QILESKVSGQQMPLHFSFIVERNLYELEPQQLQS-LP--ENERY 59
             +P GFRF+PTDEELI   L  KVS   +PL  S I + ++Y+ +P  L +  P  E E Y
Sbjct:    10 LPPGFRFHPTDEELILHYLRKKVSSSPVPL--SIIADVDIYKSDPWDLPAKAPFGEKEWY 67

Query:    60 CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
              +  R+    N +R    +  G+WKAT   K I   N  G   + IG K+ L F++ K  
Sbjct:    68 FFSPRDRKYPNGARPNRAAASGYWKATGTDKLIAVPNGEGFHEN-IGIKKALVFYRGKP- 125

Query:   114 GRNRSNAIKTNWIMHEYTL-HSLS 136
                    +KTNWIMHEY L  SLS
Sbjct:   126 ----PKGVKTNWIMHEYRLADSLS 145

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006865 "amino acid transport" evidence=RCA

GO:0010260 "organ senescence" evidence=RCA

TAIR|locus:2142285 NAC096 "NAC domain containing protein 96" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 7.3e-15, P = 7.3e-15
 Identities = 60/180 (33%), Positives = 92/180 (51%)

Query:     4 VPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPEN--E 57
             +P GFRF+PTDEELI+  L+ KV G ++ L    +++  LY  +P +L     LP    E
Sbjct:     6 LPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVID--LYSFDPWELPDKSFLPNRDME 63

Query:    58 RYCYCMRE----NDSREVSGR--GWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
              Y +C R+    N  R   G   G+WKAT   +KI  T+ + S   +IGY++ L F+K +
Sbjct:    64 WYFFCSRDKKYPNGFRTNRGTKAGYWKATGKDRKI--TSRSSS---IIGYRKTLVFYKGR 118

Query:   112 NNGRNRSNAIKTNWIMHEYTL---------HSLSTDWTLCKIKYKGKPSVQEELEDIRND 162
                 +RSN     WIMHEY L          +L   + LC++  K +     ++  I ++
Sbjct:   119 APLGDRSN-----WIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKIRKIPSE 173

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2020123 NAC020 "NAC domain containing protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 189 (71.6 bits), Expect = 9.1e-15, P = 9.1e-15
 Identities = 58/160 (36%), Positives = 84/160 (52%)

Query:     2 MMVPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPEN- 56
             M +P GFRF+PTDEEL+   L+ KV+GQ + L    I E +LY+ EP  L     LP N 
Sbjct:     4 MSLPPGFRFHPTDEELVAYYLDRKVNGQAIELEI--IPEVDLYKCEPWDLPEKSFLPGND 61

Query:    57 -ERYCYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHK 109
              E Y Y  R+    N SR    +  G+WKAT   + + +          +G K+ L +++
Sbjct:    62 MEWYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRTVESKKMK------MGMKKTLVYYR 115

Query:   110 FKNNGRNRSNAIKTNWIMHEYTL-H----SLSTDWTLCKI 144
                 GR   + ++TNW+MHEY L H    SL   + LC++
Sbjct:   116 ----GR-APHGLRTNWVMHEYRLTHAPSSSLKESYALCRV 150

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	260
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	5e-36

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  124 bits (314), Expect = 5e-36
 Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 22/139 (15%)

Query: 5   PKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQLQ----SLPENERY 59
           P GFRF+PTDEEL+   L+ KV G+ +PL    I E ++Y+ EP  L        + E Y
Sbjct: 2   PPGFRFHPTDEELVVYYLKRKVLGKPLPL-LDVIPEVDIYKFEPWDLPDGKAKGGDREWY 60

Query: 60  CYCMRE----NDSRE--VSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  R+    N SR    +G G+WKAT   K + +         V+G K+ L F+K    
Sbjct: 61  FFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGE-----VVGMKKTLVFYK---- 111

Query: 114 GRNRSNAIKTNWIMHEYTL 132
           GR      KT+W+MHEY L
Sbjct: 112 GRAP-KGEKTDWVMHEYRL 129

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	260
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	100.0

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=100.00  E-value=9.4e-40  Score=266.40  Aligned_cols=119  Identities=39%  Similarity=0.727  Sum_probs=91.9

Q ss_pred             CCCCceEcCCHHHH-HHHHHHHHcCCCCCCCcceeeeccCCCCCCcccCCC---CCCeEEEEEecc------CCCccccC
Q 047639            4 VPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSL---PENERYCYCMRE------NDSREVSG   73 (260)
Q Consensus         4 LPpGfRF~PTDeEL-~~YL~~Ki~g~plp~~~~~I~e~Dvy~~~Pw~Lp~~---~~~ewYFFs~~~------~r~~R~~~   73 (260)
                      |||||||+|||+|| .+||++|+.|.+++. ..+|+++|||++|||+|+..   .+++||||++++      +|.+|+++
T Consensus         1 LP~G~rF~PtD~ELi~~yL~~k~~g~~~~~-~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~   79 (129)
T PF02365_consen    1 LPPGFRFRPTDEELINHYLRPKILGEPLPC-EDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTG   79 (129)
T ss_dssp             --TTEEE---HHHHHHCTHHHHHTT-HHCS--CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEET
T ss_pred             CCCceEecCChHHHHHHHHHHHhcCCCCCc-ccceeecccCccChHHhhhhccCCCceEEEEEecccccCCccccccccc
Confidence            89999999999999 899999999999884 48899999999999999932   278999999997      45688999


Q ss_pred             CceEEeecCceEEEEcCCCCCcceeeEEEeeeeeecccCCCCCCCCCcccCeeEeEeeec
Q 047639           74 RGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLH  133 (260)
Q Consensus        74 ~G~Wk~~G~~k~I~~~~~~g~~~~viG~Kk~l~Fy~~~~~~~~~~~~~kT~WvMhEY~l~  133 (260)
                      +|+||++|+.+.|... +    +.+||+|++|+||.++.     +++.+|+|+||||+|.
T Consensus        80 ~G~Wk~~g~~~~i~~~-~----g~~iG~k~~l~f~~~~~-----~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   80 GGYWKSTGKEKPIKDP-G----GKVIGFKKTLVFYSGKS-----PNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             TEEEEEECEEEEEEE--T----TCEEEEEEEEEEEESST-----TS-EEEEEEEEEEEE-
T ss_pred             ceEEeecccccccccc-c----ceeeeeEEEEEEEeccC-----CCCCcCCeEEEEEEeC
Confidence            9999999999999985 3    38999999999998766     7889999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	260
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		5e-15
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		5e-15
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		6e-14

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 83/171 (48%), Gaps = 32/171 (18%)
Query: 2   MMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENE 57
           + +P GFRF PTDEEL +Q L  K +G    L    I E +LY+ +P  L +     E E
Sbjct: 18  LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYKFDPWVLPNKALFGEKE 75
Query: 58  RYCYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
            Y +  R+    N SR   V+G G+WKAT    KI +T         +G K+ L F+  K
Sbjct: 76  WYFFSPRDRKYPNGSRPNRVAGSGYWKATG-TDKIISTEGQ-----RVGIKKALVFYIGK 129
Query: 112 NNGRNRSNAIKTNWIMHEYTLHSLST--------DWTLCKIKYKGKPSVQE 154
                     KTNWIMHEY L   S         DW LC+I YK + S Q+
Sbjct: 130 A-----PKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRI-YKKQSSAQK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 83/171 (48%), Gaps = 32/171 (18%)
Query: 2   MMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENE 57
           + +P GFRF PTDEEL +Q L  K +G    L    I E +LY+ +P  L +     E E
Sbjct: 15  LSLPPGFRFYPTDEELMVQYLCRKAAGYDFSLQ--LIAEIDLYKFDPWVLPNKALFGEKE 72
Query: 58  RYCYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
            Y +  R+    N SR   V+G G+WKAT    KI +T         +G K+ L F+  K
Sbjct: 73  WYFFSPRDRKYPNGSRPNRVAGSGYWKATG-TDKIISTEGQ-----RVGIKKALVFYIGK 126
Query: 112 NNGRNRSNAIKTNWIMHEYTLHSLST--------DWTLCKIKYKGKPSVQE 154
                     KTNWIMHEY L   S         DW LC+I YK + S Q+
Sbjct: 127 A-----PKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRI-YKKQSSAQK 171

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 36/164 (21%)
Query: 4   VPKGFRFNPTDEELIQ-ILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENERY 59
           +P GFRF+PTD+EL++  L  K +GQ++P+    I E +LY+ +P  L         E Y
Sbjct: 15  LPPGFRFHPTDDELVEHYLCRKAAGQRLPV--PIIAEVDLYKFDPWDLPERALFGAREWY 72
Query: 60  CYCMRE----NDSR--EVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNN 113
            +  R+    N SR    +G G+WKAT   K +            +G K+ L F+  K  
Sbjct: 73  FFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGR------TLGIKKALVFYAGKA- 125
Query: 114 GRNRSNAIKTNWIMHEYTLHSLST-------------DWTLCKI 144
                  +KT+WIMHEY L                  DW LC++
Sbjct: 126 ----PRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRL 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	260
1ut7_A	171	No apical meristem protein; transcription regulati	2e-36
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	5e-35

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  126 bits (318), Expect = 2e-36
 Identities = 59/168 (35%), Positives = 77/168 (45%), Gaps = 31/168 (18%)

Query: 2   MMVPKGFRFNPTDEELI-QILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENE 57
           + +P GFRF PTDEEL+ Q L  K +G         I E +LY+ +P  L +     E E
Sbjct: 15  LSLPPGFRFYPTDEELMVQYLCRKAAGY--DFSLQLIAEIDLYKFDPWVLPNKALFGEKE 72

Query: 58  RYCYCMRE----NDSRE--VSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
            Y +  R+    N SR   V+G G+WKAT   K I            +G K+ L F+   
Sbjct: 73  WYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQ------RVGIKKALVFYI-- 124

Query: 112 NNGRNRSNAIKTNWIMHEYTLHSLST--------DWTLCKIKYKGKPS 151
             G+      KTNWIMHEY L   S         DW LC+I  K   +
Sbjct: 125 --GKAP-KGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQSSA 169

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  122 bits (309), Expect = 5e-35
 Identities = 53/169 (31%), Positives = 75/169 (44%), Gaps = 36/169 (21%)

Query: 2   MMVPKGFRFNPTDEELI-QILESKVSGQQMPLHFSFIVERNLYELEPQQLQS---LPENE 57
           + +P GFRF+PTD+EL+   L  K +GQ   L    I E +LY+ +P  L         E
Sbjct: 13  LNLPPGFRFHPTDDELVEHYLCRKAAGQ--RLPVPIIAEVDLYKFDPWDLPERALFGARE 70

Query: 58  RYCYCMRE----NDSRE--VSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFK 111
            Y +  R+    N SR    +G G+WKAT   K +            +G K+ L F+   
Sbjct: 71  WYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGR------TLGIKKALVFYA-- 122

Query: 112 NNGRNRSNAIKTNWIMHEYTLHSLST-------------DWTLCKIKYK 147
             G+     +KT+WIMHEY L                  DW LC++  K
Sbjct: 123 --GKA-PRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNK 168

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	260
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=4.4e-50  Score=342.73  Aligned_cols=135  Identities=37%  Similarity=0.729  Sum_probs=124.0

Q ss_pred             CCCCCCceEcCCHHHH-HHHHHHHHcCCCCCCCcceeeeccCCCCCCcccCCCC---CCeEEEEEecc------CCCccc
Q 047639            2 MMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLP---ENERYCYCMRE------NDSREV   71 (260)
Q Consensus         2 ~~LPpGfRF~PTDeEL-~~YL~~Ki~g~plp~~~~~I~e~Dvy~~~Pw~Lp~~~---~~ewYFFs~~~------~r~~R~   71 (260)
                      +.|||||||+|||||| .+||++|+.|.+++  ..+|.++|||.+|||+||+.+   +.+||||++++      .|.+|+
T Consensus        13 ~~LPpGfRF~PTDeELV~~YL~~K~~g~~~~--~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~   90 (174)
T 3ulx_A           13 LNLPPGFRFHPTDDELVEHYLCRKAAGQRLP--VPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRA   90 (174)
T ss_dssp             TTCCTTCCCCCCHHHHHHHTHHHHHHTCCCS--SSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCEE
T ss_pred             cCCCCcceeCCCHHHHHHHHHHHHhcCCCCC--cCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCceee
Confidence            5799999999999999 99999999999999  789999999999999999876   78999999987      467999


Q ss_pred             cCCceEEeecCceEEEEcCCCCCcceeeEEEeeeeeecccCCCCCCCCCcccCeeEeEeeecCC-------------CCC
Q 047639           72 SGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSL-------------STD  138 (260)
Q Consensus        72 ~~~G~Wk~~G~~k~I~~~~~~g~~~~viG~Kk~l~Fy~~~~~~~~~~~~~kT~WvMhEY~l~~~-------------~~~  138 (260)
                      +++||||++|+++.|..  ++    .+||+||+|+||.+++     +++.||+|+||||+|..+             .++
T Consensus        91 t~~G~WkatG~dk~I~~--~g----~~vG~KktLvFy~g~~-----p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~  159 (174)
T 3ulx_A           91 AGNGYWKATGADKPVAP--RG----RTLGIKKALVFYAGKA-----PRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDD  159 (174)
T ss_dssp             ETTEEEEECSCCEEECC--SS----SCCEEEEEEEEEESST-----TSCEEEEEEEEEEEECSCC-----------CCSS
T ss_pred             cCCceEccCCCCcEEee--CC----cEEEEEEEEEEecCCC-----CCCCcCCeEEEEEEeCCCCCcccccccCCCCCCC
Confidence            99999999999999975  23    7999999999999988     899999999999999875             368


Q ss_pred             eEEEEEEEeCC
Q 047639          139 WTLCKIKYKGK  149 (260)
Q Consensus       139 ~VLCrI~~k~~  149 (260)
                      |||||||+|+.
T Consensus       160 wVlCrvf~K~~  170 (174)
T 3ulx_A          160 WVLCRLYNKKN  170 (174)
T ss_dssp             EEEEEEEESCC
T ss_pred             EEEEEEEEcCC
Confidence            99999999875

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=8.5e-50  Score=340.34  Aligned_cols=136  Identities=40%  Similarity=0.714  Sum_probs=122.7

Q ss_pred             CCCCCCceEcCCHHHH-HHHHHHHHcCCCCCCCcceeeeccCCCCCCcccCCCC---CCeEEEEEecc------CCCccc
Q 047639            2 MMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLP---ENERYCYCMRE------NDSREV   71 (260)
Q Consensus         2 ~~LPpGfRF~PTDeEL-~~YL~~Ki~g~plp~~~~~I~e~Dvy~~~Pw~Lp~~~---~~ewYFFs~~~------~r~~R~   71 (260)
                      +.|||||||+|||||| .+||++|+.|.+++  ..+|+++|||.+|||+||+.+   +++||||++++      .|.+|+
T Consensus        15 ~~lPpGfRF~PTDeELv~~YL~~K~~g~~~~--~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~   92 (171)
T 1ut7_A           15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFS--LQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV   92 (171)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCS--SCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEE
T ss_pred             cCCCCcceeCCChHHHHHHHHHHHhcCCCCC--CCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCccccc
Confidence            5799999999999999 99999999999999  789999999999999999876   78999999987      467899


Q ss_pred             cCCceEEeecCceEEEEcCCCCCcceeeEEEeeeeeecccCCCCCCCCCcccCeeEeEeeecCC--------CCCeEEEE
Q 047639           72 SGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSL--------STDWTLCK  143 (260)
Q Consensus        72 ~~~G~Wk~~G~~k~I~~~~~~g~~~~viG~Kk~l~Fy~~~~~~~~~~~~~kT~WvMhEY~l~~~--------~~~~VLCr  143 (260)
                      |++||||++|+++.|..  ++    .+||+||+|+||.+++     +++.||+|+||||+|...        .++|||||
T Consensus        93 t~~G~Wk~tG~~k~I~~--~~----~~vG~KktLvFy~g~~-----p~g~kT~WvMhEY~l~~~~~~~~~~~~~~~VlCr  161 (171)
T 1ut7_A           93 AGSGYWKATGTDKIIST--EG----QRVGIKKALVFYIGKA-----PKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCR  161 (171)
T ss_dssp             ETTEEEEEEEEEEEEEE--TT----EEEEEEEEEEEEESST-----TSCEEEEEEEEEEEECCCC--------CCEEEEE
T ss_pred             CCCCEEeccCCCceEEe--cC----cEEEEEEEEEEEcCcC-----CCCCcCCeEEEEEEcCCCccccCcccCCCEEEEE
Confidence            99999999999999986  33    8999999999999988     899999999999999865        47999999


Q ss_pred             EEEeCCC
Q 047639          144 IKYKGKP  150 (260)
Q Consensus       144 I~~k~~~  150 (260)
                      ||+|...
T Consensus       162 v~~k~~~  168 (171)
T 1ut7_A          162 IYKKQSS  168 (171)
T ss_dssp             EEECC--
T ss_pred             EEEcCCC
Confidence            9999764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	260
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	1e-32

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  115 bits (288), Expect = 1e-32
 Identities = 55/165 (33%), Positives = 70/165 (42%), Gaps = 31/165 (18%)

Query: 1   MMMVPKGFRFNPTDEELIQI-LESKVSGQQMPLHFSFIVERNLYELEPQQL---QSLPEN 56
            + +P GFRF PTDEEL+   L  K +G         I E +LY+ +P  L       E 
Sbjct: 14  QLSLPPGFRFYPTDEELMVQYLCRKAAGY--DFSLQLIAEIDLYKFDPWVLPNKALFGEK 71

Query: 57  ERYCYCMREND------SREVSGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKF 110
           E Y +  R+           V+G G+WKAT   K I            +G K+ L F+  
Sbjct: 72  EWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQ------RVGIKKALVFYIG 125

Query: 111 KNNGRNRSNAIKTNWIMHEYTLHSLST--------DWTLCKIKYK 147
           K          KTNWIMHEY L   S         DW LC+I  K
Sbjct: 126 KA-----PKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKK 165

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	260
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2e-48  Score=328.10  Aligned_cols=134  Identities=41%  Similarity=0.724  Sum_probs=120.7

Q ss_pred             CCCCCCceEcCCHHHH-HHHHHHHHcCCCCCCCcceeeeccCCCCCCcccCCCC---CCeEEEEEecc------CCCccc
Q 047639            2 MMVPKGFRFNPTDEEL-IQILESKVSGQQMPLHFSFIVERNLYELEPQQLQSLP---ENERYCYCMRE------NDSREV   71 (260)
Q Consensus         2 ~~LPpGfRF~PTDeEL-~~YL~~Ki~g~plp~~~~~I~e~Dvy~~~Pw~Lp~~~---~~ewYFFs~~~------~r~~R~   71 (260)
                      ++|||||||+|||||| .+||++|+.|.+++  ..+|+++|||++|||+||+..   +++||||++++      .|.+|+
T Consensus        15 l~LPpG~RF~PTDeELv~~YL~~Ki~g~~l~--~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~   92 (166)
T d1ut7a_          15 LSLPPGFRFYPTDEELMVQYLCRKAAGYDFS--LQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRV   92 (166)
T ss_dssp             SCCCTTEEECCCHHHHHHHTHHHHHTTCCCS--SCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEE
T ss_pred             ccCCCccccCCCcHHHHHHHHHHHHcCCCCC--cccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCccccc
Confidence            5899999999999999 89999999999999  789999999999999999765   78899999987      466899


Q ss_pred             cCCceEEeecCceEEEEcCCCCCcceeeEEEeeeeeecccCCCCCCCCCcccCeeEeEeeecCC--------CCCeEEEE
Q 047639           72 SGRGWWKATSHVKKIYATNNNGSCADVIGYKRPLTFHKFKNNGRNRSNAIKTNWIMHEYTLHSL--------STDWTLCK  143 (260)
Q Consensus        72 ~~~G~Wk~~G~~k~I~~~~~~g~~~~viG~Kk~l~Fy~~~~~~~~~~~~~kT~WvMhEY~l~~~--------~~~~VLCr  143 (260)
                      +++|+||++|+++.|.+  ++    .+||+|++|+||+++.     +++.+|+|+||||+|.+.        .++|||||
T Consensus        93 ~g~G~Wk~~g~~~~i~~--~g----~~vG~kk~l~fy~~~~-----~~~~~t~W~M~EY~l~~~~~~~~~~~~~~~VLCr  161 (166)
T d1ut7a_          93 AGSGYWKATGTDKIIST--EG----QRVGIKKALVFYIGKA-----PKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCR  161 (166)
T ss_dssp             ETTEEEEEEEEEEEEEE--TT----EEEEEEEEEEEEESST-----TSCEEEEEEEEEEEECCCC--------CCEEEEE
T ss_pred             cCCCEecccCCCceEec--CC----cEEEEEEEEEEEecCC-----CCCCccCeEEEEEecCCcccccCccccCCEEEEE
Confidence            99999999999998875  33    8999999999999988     889999999999999875        46899999


Q ss_pred             EEEeC
Q 047639          144 IKYKG  148 (260)
Q Consensus       144 I~~k~  148 (260)
                      ||+|.
T Consensus       162 I~~Kk  166 (166)
T d1ut7a_         162 IYKKQ  166 (166)
T ss_dssp             EEECC
T ss_pred             EEecC
Confidence            99884