Citrus Sinensis ID: 047759

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP
Secondary Structure (PSIPRED)
ccccccccEEEEcHHHHHHHHHHHHHHccccccccccccEEEEEEEEcccEEEEEEccEEEEEEEEccEEEEEccEEEEEEEcccEEEcEEEEEEEEEEEcc
Secondary Structure Prediction (SSPRO)
cHHHccccEEEccHHHHHHHHHHHHHHHccccccccHHHHHHHcccccccEEEEEEcccEEEEEEEccEEEEEccEEEEEEEcccEEEEccEEcEEEEEEcc
Coil and Loop (DISEMBL)
maaekeggivkkGHEEGLKLAVSLLKkfelpegllplaNVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRgvkakelmlwpp
Flexible Loop (DISEMBL)
maaekeggivkkgheeGLKLAVSLLKKFelpegllplANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDteingyvdkmkikklrgvkakelmlwpp
Low Complexity Region (SEG)
MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP
Disordered region (IsUnstruct)
****************GLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELML***
Disordered Region (DISOPRED)
*****EG**VKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP
Disordered Region (DISEMBL)
MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP
Disordered Region (DISPRO)
****KEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
449436677	137	PREDICTED: uncharacterized protein LOC10	1.0	0.744	0.764	6e-38
356542189	136	PREDICTED: uncharacterized protein LOC10	0.980	0.735	0.87	1e-36
225443814	133	PREDICTED: uncharacterized protein LOC10	0.980	0.751	0.77	1e-33
147778776	133	hypothetical protein VITISV_003230 [Viti	0.980	0.751	0.76	7e-33
356546962	136	PREDICTED: uncharacterized protein LOC10	0.980	0.735	0.84	8e-33
224076966	136	predicted protein [Populus trichocarpa]	0.980	0.735	0.77	6e-32
226509585	139	uncharacterized protein LOC100278998 [Ze	1.0	0.733	0.627	1e-31
255563132	137	conserved hypothetical protein [Ricinus	1.0	0.744	0.754	2e-31
226532856	138	uncharacterized protein LOC100276192 [Ze	1.0	0.739	0.627	2e-31
224079557	136	predicted protein [Populus trichocarpa]	0.980	0.735	0.72	2e-31

>gi|449436677|ref|XP_004136119.1| PREDICTED: uncharacterized protein LOC101210896 [Cucumis sativus] gi|449489173|ref|XP_004158237.1| PREDICTED: uncharacterized LOC101210896 [Cucumis sativus]

 Score =  161 bits (407), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 78/102 (76%), Positives = 91/102 (89%)

Query: 1   MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKV 60
           MA  K GGIVKKG EEGL+LAV+LLK+FELPEGLLPLA+VVEVGYV+ TGY+WIVQ+ KV
Sbjct: 1   MADPKAGGIVKKGQEEGLELAVALLKEFELPEGLLPLADVVEVGYVKETGYVWIVQRKKV 60

Query: 61  EHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
           EHEFKM+SKLVSYDTEI G++   +IKKL+GVKAKE +LWPP
Sbjct: 61  EHEFKMVSKLVSYDTEITGFILNKRIKKLKGVKAKEFLLWPP 102

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356542189|ref|XP_003539552.1| PREDICTED: uncharacterized protein LOC100784386 [Glycine max]

 Score =  157 bits (396), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 87/100 (87%), Positives = 94/100 (94%)

Query: 3   AEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEH 62
           AEKEGG+VKKGHEEGLKLA SLL++FELPEGLLPLA+VVEVGYV+ TGYMWIVQ+ KVEH
Sbjct: 2   AEKEGGVVKKGHEEGLKLAASLLQEFELPEGLLPLADVVEVGYVKGTGYMWIVQKKKVEH 61

Query: 63  EFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
           EFKMISKLVSYDTEI GYV K KIKKL+GVKAKELMLWPP
Sbjct: 62  EFKMISKLVSYDTEIKGYVSKKKIKKLKGVKAKELMLWPP 101

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225443814|ref|XP_002273711.1| PREDICTED: uncharacterized protein LOC100261780 [Vitis vinifera] gi|297740497|emb|CBI30679.3| unnamed protein product [Vitis vinifera]

 Score =  146 bits (369), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/100 (77%), Positives = 90/100 (90%)

Query: 3   AEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEH 62
           AEKEGGIVK GHEEG+++AV+LL++F LP GLLPL +V+EVG+V STGYMWI+Q+ KVEH
Sbjct: 2   AEKEGGIVKTGHEEGMRMAVALLEEFGLPLGLLPLVDVIEVGFVRSTGYMWILQKKKVEH 61

Query: 63  EFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
            FKMISKLVSYDTEI GY+DK  IKKL+GVKAKELMLWPP
Sbjct: 62  NFKMISKLVSYDTEIRGYIDKKHIKKLKGVKAKELMLWPP 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147778776|emb|CAN71580.1| hypothetical protein VITISV_003230 [Vitis vinifera]

 Score =  144 bits (363), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 76/100 (76%), Positives = 90/100 (90%)

Query: 3   AEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEH 62
           AEKEGGIVK GHEEG+++AV+LL++F LP GLLPL +V+EVG+V STGYMWI+Q+ KVEH
Sbjct: 2   AEKEGGIVKTGHEEGMRMAVALLEEFGLPLGLLPLVDVIEVGFVRSTGYMWILQKKKVEH 61

Query: 63  EFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
            FKMISKLVSYDTEI GY++K  IKKL+GVKAKELMLWPP
Sbjct: 62  NFKMISKLVSYDTEIRGYIEKKHIKKLKGVKAKELMLWPP 101

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546962|ref|XP_003541888.1| PREDICTED: uncharacterized protein LOC100791850 [Glycine max]

 Score =  144 bits (362), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/100 (84%), Positives = 94/100 (94%)

Query: 3   AEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEH 62
           AEKEGG+VKKGHEEGLKLA SLL++FELPEGLLPLA+V+EVGYV+ TGYMWIVQ+ KVEH
Sbjct: 2   AEKEGGVVKKGHEEGLKLAASLLQEFELPEGLLPLADVIEVGYVKGTGYMWIVQKKKVEH 61

Query: 63  EFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
           EFK+ISKLVSYDTEI GY+ K KIKKL+GVKAKELMLWPP
Sbjct: 62  EFKLISKLVSYDTEIKGYISKKKIKKLKGVKAKELMLWPP 101

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224076966|ref|XP_002305071.1| predicted protein [Populus trichocarpa] gi|222848035|gb|EEE85582.1| predicted protein [Populus trichocarpa]

 Score =  141 bits (355), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/100 (77%), Positives = 87/100 (87%)

Query: 3   AEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEH 62
           AEKEG IVK GHEEGLK+A SLL++F LP GLLPLA+VVEVG+V+ TGYMWI+Q+ KVEH
Sbjct: 2   AEKEGAIVKTGHEEGLKMAASLLEEFGLPLGLLPLADVVEVGFVKGTGYMWILQKKKVEH 61

Query: 63  EFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
            FKMISKLVSYDTEI G+V    IKKL+GVKAKELMLWPP
Sbjct: 62  NFKMISKLVSYDTEITGFVSTKNIKKLKGVKAKELMLWPP 101

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226509585|ref|NP_001145546.1| uncharacterized protein LOC100278998 [Zea mays] gi|195657859|gb|ACG48397.1| hypothetical protein [Zea mays]

 Score =  140 bits (352), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 64/102 (62%), Positives = 80/102 (78%)

Query: 1   MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKV 60
           MAAEKEG +V KGH+EG+K A +LL++F LP GLLPL +V EVG+V +TGY W+ Q+ KV
Sbjct: 1   MAAEKEGAVVTKGHDEGMKAAAALLEEFGLPPGLLPLEDVTEVGFVRATGYFWLAQRKKV 60

Query: 61  EHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
           EH F+ I K VSYD +I GYV    I++L+GVKAKELMLWPP
Sbjct: 61  EHRFRKIGKQVSYDVDIAGYVRPRGIRRLKGVKAKELMLWPP 102

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255563132|ref|XP_002522570.1| conserved hypothetical protein [Ricinus communis] gi|223538261|gb|EEF39870.1| conserved hypothetical protein [Ricinus communis]

 Score =  139 bits (351), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/102 (75%), Positives = 89/102 (87%)

Query: 1   MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKV 60
           MA +KEGGIVKKG EEGLK+A+S+L++FELP GLLPL  V+EVG+V  TGYMWI+Q+ KV
Sbjct: 1   MAEKKEGGIVKKGQEEGLKMAISILEEFELPLGLLPLEGVIEVGFVRDTGYMWILQKKKV 60

Query: 61  EHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
           EH FKMISKLVSYD+EI GYV K  IKKL+GVKAKELMLWPP
Sbjct: 61  EHSFKMISKLVSYDSEITGYVSKKLIKKLKGVKAKELMLWPP 102

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226532856|ref|NP_001143509.1| uncharacterized protein LOC100276192 [Zea mays] gi|195621716|gb|ACG32688.1| hypothetical protein [Zea mays] gi|413946620|gb|AFW79269.1| hypothetical protein ZEAMMB73_054395 [Zea mays]

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/102 (62%), Positives = 80/102 (78%)

Query: 1   MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKV 60
           MAAEKEG +V KGH+EG+K A +LL++F LP GLLPL +V EVG+V +TGY W+ Q+ KV
Sbjct: 1   MAAEKEGAVVTKGHDEGMKAAAALLEEFGLPPGLLPLEDVTEVGFVRATGYFWLAQRKKV 60

Query: 61  EHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
           EH F+ I K VSYD EI GYV    I++L+GVKAKEL+LWPP
Sbjct: 61  EHRFRKIGKQVSYDVEIAGYVRPRGIRRLKGVKAKELVLWPP 102

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079557|ref|XP_002305889.1| predicted protein [Populus trichocarpa] gi|222848853|gb|EEE86400.1| predicted protein [Populus trichocarpa]

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/100 (72%), Positives = 89/100 (89%)

Query: 3   AEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEH 62
           AEKEGG+V KGH+EGLK+A+SLL++F LP GLLPLA+V+EVG+V STGYMWIVQ+ KVEH
Sbjct: 2   AEKEGGVVAKGHQEGLKMAISLLEEFGLPLGLLPLADVIEVGFVRSTGYMWIVQKKKVEH 61

Query: 63  EFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
            FK+ SK+VSYDT+I G+V K +I+KL+GVKAKE MLWPP
Sbjct: 62  NFKIASKIVSYDTDIKGHVSKKQIRKLKGVKAKEFMLWPP 101

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
TAIR|locus:2134966	157	AT4G24130 [Arabidopsis thalian	1.0	0.649	0.421	3.1e-19
TAIR|locus:2170463	143	AT5G46230 [Arabidopsis thalian	0.950	0.678	0.402	6.5e-19
TAIR|locus:2198247	157	AT1G30020 [Arabidopsis thalian	0.833	0.541	0.458	1.2e-17
TAIR|locus:2027579	166	SVB "SMALLER WITH VARIABLE BRA	0.745	0.457	0.526	1.6e-17
TAIR|locus:2203043	179	AT1G09310 [Arabidopsis thalian	0.745	0.424	0.513	2e-17
TAIR|locus:2157824	171	AT5G49600 "AT5G49600" [Arabido	0.764	0.456	0.372	8.4e-10
TAIR|locus:505006096	166	AT1G02816 "AT1G02816" [Arabido	0.872	0.536	0.333	6.1e-07
TAIR|locus:2133264	167	AT4G02370 "AT4G02370" [Arabido	0.813	0.497	0.344	7.8e-07
TAIR|locus:2166178	170	AT5G37070 "AT5G37070" [Arabido	0.950	0.570	0.281	5.5e-06
TAIR|locus:2149770	170	AT5G01610 "AT5G01610" [Arabido	0.901	0.541	0.275	5.8e-05

TAIR|locus:2134966 AT4G24130 [Arabidopsis thaliana (taxid:3702)]

 Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
 Identities = 43/102 (42%), Positives = 65/102 (63%)

Query:     1 MAAEKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKV 60
             +  E+EG  +  G EE  K ++ LL++   P+G++PL N+VE G V +TGY+W+ Q    
Sbjct:     9 VGGEREGAEIVYGAEECYKQSLELLEELGFPKGVMPLKNLVECGRVRATGYVWMKQDTPY 68

Query:    61 EHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLWPP 102
             EH F+  +  VSY  E+  YVDK  +KK+ GVK+K++ LW P
Sbjct:    69 EHFFEATNTRVSYGLEVTAYVDKCCMKKMTGVKSKQMFLWVP 110

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005634 "nucleus" evidence=IDA

TAIR|locus:2170463 AT5G46230 [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 39/97 (40%), Positives = 65/97 (67%)

Query:     4 EKEGGIVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHE 63
             ++EG  +  G     + A  +L    LP+GLLPL N+ E+G+ +STGY+WI  +NKV+H 
Sbjct:    10 QREGAEICNGESNCKQKAKEILSTMNLPKGLLPLDNMTEIGHNKSTGYVWIKIKNKVQHR 69

Query:    64 FKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLW 100
             FK I + VSYD+E+   ++  ++ +L G+K+KE+++W
Sbjct:    70 FKAIGRNVSYDSEVTAILENRRMSQLTGIKSKEILIW 106

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2198247 AT1G30020 [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 39/85 (45%), Positives = 60/85 (70%)

Query:    18 LKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEI 77
             L  A  LL   +LP GLLPL ++ EVGY ++ G++W+  ++K+EH F+ I + V YDTEI
Sbjct:    24 LDKAKELLALIKLPTGLLPLKDMTEVGYNKTKGFVWMRMRSKIEHTFREIGRRVLYDTEI 83

Query:    78 NGYVDKMKIKKLRGVKAKELMLWPP 102
               +V+  ++++L GVK+KELM+W P
Sbjct:    84 TAFVEDRRMRRLTGVKSKELMIWVP 108

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2027579 SVB "SMALLER WITH VARIABLE BRANCHES" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 40/76 (52%), Positives = 54/76 (71%)

Query:    25 LKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKM 84
             LK+  +P GLLPL ++ EVGY   TG +W+ Q+  + H+F+ I KLVSY TE+   V+  
Sbjct:    29 LKEVSMPNGLLPLKDIEEVGYDRETGIVWLKQKKSITHKFEAIGKLVSYATEVIAQVEVG 88

Query:    85 KIKKLRGVKAKELMLW 100
             KIKKL GVKAKEL++W
Sbjct:    89 KIKKLTGVKAKELLIW 104

GO:0005737 "cytoplasm" evidence=ISM

GO:0010090 "trichome morphogenesis" evidence=IMP

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2203043 AT1G09310 [Arabidopsis thaliana (taxid:3702)]

 Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
 Identities = 39/76 (51%), Positives = 53/76 (69%)

Query:    25 LKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKM 84
             LK+  +P GLLPL ++ EVGY   +G +W+ Q+  + H+F  I KLVSY TE+   V+  
Sbjct:    29 LKEISMPNGLLPLKDIEEVGYDRESGVVWLKQKKSITHKFTEIDKLVSYGTEVTAIVETG 88

Query:    85 KIKKLRGVKAKELMLW 100
             KIKKL GVKAKEL++W
Sbjct:    89 KIKKLTGVKAKELLIW 104

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0048046 "apoplast" evidence=IDA

GO:0019344 "cysteine biosynthetic process" evidence=RCA

TAIR|locus:2157824 AT5G49600 "AT5G49600" [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 32/86 (37%), Positives = 48/86 (55%)

Query:    23 SLLKKFELPEGLLPLANVVEVGYVESTGYMWIV-QQNKVEHEFKMISKLVSYDT------ 75
             SLL +  LP  LL    + E GYV+ TG++W+  ++ K E + +    L+ +D       
Sbjct:    25 SLLSEIGLPNRLLSNKEIKECGYVKDTGFVWLKHKEKKKEDQKRRYQDLLRFDNVVVCFE 84

Query:    76 -EINGYVDKMKIKKLRGVKAKELMLW 100
              E+  Y +  +IKKL GVKAKE M+W
Sbjct:    85 DEVTAYFEPNRIKKLTGVKAKEFMVW 110

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006096 AT1G02816 "AT1G02816" [Arabidopsis thaliana (taxid:3702)]

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 31/93 (33%), Positives = 49/93 (52%)

Query:     9 IVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMI- 67
             ++   +++ +  A +LL+ +  P G+LP   VV     +STG  +    NK    F +  
Sbjct:    20 LIAAANDDDIPTAYTLLQSYNFPVGILP-KGVVSYDLDKSTG-QFHAYFNK-SCSFALQG 76

Query:    68 SKLVSYDTEINGYVDKMKIKKLRGVKAKELMLW 100
             S  + Y + I+GY+ + KI KL GVK K L LW
Sbjct:    77 SYQLDYKSTISGYISENKITKLTGVKVKVLFLW 109

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

TAIR|locus:2133264 AT4G02370 "AT4G02370" [Arabidopsis thaliana (taxid:3702)]

 Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
 Identities = 30/87 (34%), Positives = 44/87 (50%)

Query:    15 EEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMI-SKLVSY 73
             E     A SLL+ +  P G+LP   VV      +TG       +     F ++ S  ++Y
Sbjct:    26 ESDTPTAYSLLQSYNFPVGILP-KGVVAYDLDTTTGKFHAYFNDSCS--FNLVGSYQLNY 82

Query:    74 DTEINGYVDKMKIKKLRGVKAKELMLW 100
              + I+GY+ + K+KKL GVK K L LW
Sbjct:    83 KSTISGYISENKLKKLTGVKVKVLFLW 109

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005773 "vacuole" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0048767 "root hair elongation" evidence=RCA

TAIR|locus:2166178 AT5G37070 "AT5G37070" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 29/103 (28%), Positives = 54/103 (52%)

Query:     1 MAAEKEGG---IVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQ 57
             +++  EGG   +V K   +  K    LLK+F LP G+ P  +     + E TG + +   
Sbjct:    31 LSSSIEGGTKWLVNKLKGKMQKPLPELLKEFGLPVGIFP-QDATNYEFNEETGKLTVFIP 89

Query:    58 NKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLW 100
                E  ++  S ++ + T + GY++K K+ ++ G+K K +M+W
Sbjct:    90 ETCEVGYRD-SSVLRFSTTVTGYLEKGKLAEVEGMKTK-VMIW 130

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2149770 AT5G01610 "AT5G01610" [Arabidopsis thaliana (taxid:3702)]

 Score = 96 (38.9 bits), Expect = 5.8e-05, P = 5.8e-05
 Identities = 27/98 (27%), Positives = 52/98 (53%)

Query:     6 EGG---IVKKGHEEGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEH 62
             EGG   +V K   +  K    LLK+++LP G+ P  +     + E T  + ++  +  E 
Sbjct:    36 EGGTKWLVNKIKGKMQKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEV 94

Query:    63 EFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELMLW 100
              +K  S ++ + T + G+++K K+  + G+K K +M+W
Sbjct:    95 GYKD-SSVLKFTTTVTGHLEKGKLTDVEGIKTK-VMIW 130

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00035882001 SubName- Full=Chromosome chr10 scaffold_81, whole genome shotgun sequence; (133 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	102
pfam04398	108	pfam04398, DUF538, Protein of unknown function, DU	1e-24

>gnl|CDD|218064 pfam04398, DUF538, Protein of unknown function, DUF538

 Score = 88.8 bits (221), Expect = 1e-24
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 21  AVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGY 80
           A  LL+++ LP GLLP   V E    E+TG  W+      E  F+  S  V YD  + GY
Sbjct: 2   AYELLEEYGLPVGLLPK-GVTEYTLDETTGKFWVYLNGTCEFTFEGYS--VRYDPTVTGY 58

Query: 81  VDKMKIKKLRGVKAKELMLWPP 102
           + K ++  L GVK K L LW P
Sbjct: 59  ISKGRLSGLEGVKVKVLFLWVP 80

This family consists of several plant proteins of unknown function. Length = 108

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
PF04398	110	DUF538: Protein of unknown function, DUF538; Inter	100.0

>PF04398 DUF538: Protein of unknown function, DUF538; InterPro: IPR007493 This family consists of several plant proteins of unknown function

Probab=100.00  E-value=5.5e-37  Score=213.31  Aligned_cols=80  Identities=51%  Similarity=0.912  Sum_probs=63.3

Q ss_pred             hHHHHHHhCCCCCCCcCCCCceEEEEEccccEEEEEecCeEEEEEeecCeEEEEceEEEEEEecCceeccceeEEEEEee
Q 047759           20 LAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKELML   99 (102)
Q Consensus        20 ~a~elL~~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l~~~c~~~f~~~~~~v~Y~~~ItG~l~~g~i~~L~GVk~k~lf~   99 (102)
                      ||||+|++||||+||||+ +|++|+||++||+|||+|+++|+++|+.  |+|+|+++|||+|++|+|++|+|||+|+||+
T Consensus         1 tayelL~~~glP~GLLP~-~v~~y~l~~~tG~f~v~l~~~C~~~~~~--~~v~Y~~~ItG~i~~g~i~~L~GVk~k~l~~   77 (110)
T PF04398_consen    1 TAYELLEEYGLPRGLLPL-GVTEYGLNRDTGFFWVKLKSPCEFRFEG--YLVSYDSEITGYIEKGKIKNLTGVKVKELFL   77 (110)
T ss_dssp             --HHHHHHHS-TT-TTTS-SS-EEEE-TTT-SEEEE-SS-EEEESTT--SEEEE-SEEEEEE-SS-EEEEES-EEE-SSS
T ss_pred             CHHHhHHHcCCCCCcCCC-CceEEEEecCCcEEEEEecCCEEEEEEE--EEEEEcCeEEEEECCCcCccccCEEEEEEEE
Confidence            699999999999999995 9999999999999999999999999964  8999999999999999999999999999999


Q ss_pred             cCC
Q 047759          100 WPP  102 (102)
Q Consensus       100 W~~  102 (102)
                      |++
T Consensus        78 W~~   80 (110)
T PF04398_consen   78 WVP   80 (110)
T ss_dssp             EES
T ss_pred             Eee
Confidence            986

; PDB: 1YDU_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	102
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	9e-20

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1 Length = 170

 Score = 77.6 bits (191), Expect = 9e-20
 Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 24  LLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDK 83
           LLK+++LP G+ P  +     + E T  + ++  +  E  +K  S ++ + T + G+++K
Sbjct: 57  LLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYK-DSSVLKFTTTVTGHLEK 114

Query: 84  MKIKKLRGVKAKELMLWPP 102
            K+  + G+K K +M+W  
Sbjct: 115 GKLTDVEGIKTK-VMIWVK 132

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	102
1ydu_A	170	AT5G01610; DUF538, structural genomics, protein st	100.0

>1ydu_A AT5G01610; DUF538, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG unknown function; NMR {Arabidopsis thaliana} SCOP: b.162.1.1

Probab=100.00  E-value=2.7e-35  Score=217.23  Aligned_cols=84  Identities=25%  Similarity=0.489  Sum_probs=80.5

Q ss_pred             cchhhHHHHHHhCCCCCCCcCCCCceEEEEEccccEEEEEecCeEEEEEeecCeEEEEceEEEEEEecCceeccceeEEE
Q 047759           16 EGLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAK   95 (102)
Q Consensus        16 ~~~~~a~elL~~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l~~~c~~~f~~~~~~v~Y~~~ItG~l~~g~i~~L~GVk~k   95 (102)
                      .+++++||+|++||||+|||| ++|++|+||++||+|||+|+++|+|.|+. +++|+|+++|||+|++|+|++|+||++|
T Consensus        49 ~~~~ta~elL~e~gLP~GLLP-~~V~~Y~l~~~tG~f~V~l~~~C~~~f~~-~~~v~Y~~~VtG~l~~GkI~~L~GVk~K  126 (170)
T 1ydu_A           49 KMQKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYKD-SSVLKFTTTVTGHLEKGKLTDVEGIKTK  126 (170)
T ss_dssp             TTTSSCHHHHHHHSCTTCTTT-SSSCEEEECTTTCSEEEECSSCEEEESTT-SSEEEECSEEEEEECSSCEEEEESCEEE
T ss_pred             cccccHHHHHHHcCCCCCcCC-CCCeEEEEECCCcEEEEEeCCCEEEEecC-ccEEEEcCEEEEEEcCCcCccccCEEEE
Confidence            367899999999999999999 79999999999999999999999999985 8999999999999999999999999999


Q ss_pred             EEeecCC
Q 047759           96 ELMLWPP  102 (102)
Q Consensus        96 ~lf~W~~  102 (102)
                      +| +|+|
T Consensus       127 ~L-lWv~  132 (170)
T 1ydu_A          127 VM-IWVK  132 (170)
T ss_dssp             SS-SEES
T ss_pred             EE-EEee
Confidence            99 9986

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	102
d1ydua1	169	b.162.1.1 (A:2-170) Hypothetical protein At5g01610	1e-20

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 169

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 79.0 bits (195), Expect = 1e-20
 Identities = 21/79 (26%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 24  LLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDK 83
           LLK+++LP G+ P  +     + E T  + ++  +  E  +K  S ++ + T + G+++K
Sbjct: 56  LLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYK-DSSVLKFTTTVTGHLEK 113

Query: 84  MKIKKLRGVKAKELMLWPP 102
            K+  + G+K K +M+W  
Sbjct: 114 GKLTDVEGIKTK-VMIWVK 131

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	102
d1ydua1	169	Hypothetical protein At5g01610 {Thale cress (Arabi	100.0

>d1ydua1 b.162.1.1 (A:2-170) Hypothetical protein At5g01610 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: At5g01610-like
superfamily: At5g01610-like
family: At5g01610-like
domain: Hypothetical protein At5g01610
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.7e-34  Score=211.01  Aligned_cols=83  Identities=27%  Similarity=0.511  Sum_probs=79.0

Q ss_pred             chhhHHHHHHhCCCCCCCcCCCCceEEEEEccccEEEEEecCeEEEEEeecCeEEEEceEEEEEEecCceeccceeEEEE
Q 047759           17 GLKLAVSLLKKFELPEGLLPLANVVEVGYVESTGYMWIVQQNKVEHEFKMISKLVSYDTEINGYVDKMKIKKLRGVKAKE   96 (102)
Q Consensus        17 ~~~~a~elL~~~gLP~GLLP~~~V~~y~l~~~tG~f~v~l~~~c~~~f~~~~~~v~Y~~~ItG~l~~g~i~~L~GVk~k~   96 (102)
                      .+.+++|||++||||+|||| ++|++|+||++||+|||+|+++|++.|+. +|+|+|+++|||+|++|+|++|+|||+| 
T Consensus        49 ~~k~l~ELL~eygLP~GLLP-~~V~~Y~l~~~TG~f~V~l~~~C~~~f~~-sy~v~Y~~~VtG~ls~Gki~~L~GVkvK-  125 (169)
T d1ydua1          49 MQKPLPELLKEYDLPIGIFP-GDATNYEFDEETKKLTVLIPSICEVGYKD-SSVLKFTTTVTGHLEKGKLTDVEGIKTK-  125 (169)
T ss_dssp             TTSSCHHHHHHHSCTTCTTT-SSSCEEEECTTTCSEEEECSSCEEEESTT-SSEEEECSEEEEEECSSCEEEEESCEEE-
T ss_pred             CCCCHHHHHHhcCCCCccCC-CCceEEEEECCCcEEEEEeCCCEEEEecC-ceEEEEcCEEEEEEcCCcCccccceEEE-
Confidence            56789999999999999999 79999999999999999999999999974 8999999999999999999999999999 


Q ss_pred             EeecCC
Q 047759           97 LMLWPP  102 (102)
Q Consensus        97 lf~W~~  102 (102)
                      +|+|++
T Consensus       126 lflWv~  131 (169)
T d1ydua1         126 VMIWVK  131 (169)
T ss_dssp             SSSEES
T ss_pred             EEEEEE
Confidence            789986