Citrus Sinensis ID: 047831

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150--
Protein Sequence
MEIRALFSCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccEEcccccccccHcccccccccHHHHHHHHHHHHHcccccccccccccEcccEEEEEEEccEEEEcc
Coil and Loop (DISEMBL)
MEIRALFSCALLGIFLLFLQSHCHNLAINFHqdvylkgspqrntiqqypVTRKIVKaklglpplqwrKKLANFASWWVNqqrrdcdlvhsnsnhgeslfwgsgknwksADAVAAWAAEQgyynhktnscsrykdCLRYTQMVWRQSLKVGCL
Flexible Loop (DISEMBL)
MEIRALFSCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGyynhktnscsryKDCLRYTQMVWRQSLKVGCL
Low Complexity Region (SEG)
MEIRALFSCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSadavaawaaEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL
Disordered region (IsUnstruct)
***RALFSCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKV***
Disordered Region (DISOPRED)
****ALFSCALLGIFLLFLQSHCHNLAINFHQ*********RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL
Disordered Region (DISEMBL)
MEIRALFSCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL
Disordered Region (DISPRO)
*EIRALFSCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MEIRALFSCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	152	2.2.26 [Sep-21-2011]
Q40374	173	Pathogenesis-related prot	N/A	no	0.723	0.635	0.463	4e-24
P09042	168	Pathogenesis-related prot	N/A	no	0.875	0.791	0.346	4e-21
Q00008	167	Pathogenesis-related prot	N/A	no	0.723	0.658	0.423	5e-21
P07053	168	Pathogenesis-related prot	N/A	no	0.743	0.672	0.407	9e-21
P35792	164	Pathogenesis-related prot	N/A	no	0.743	0.689	0.412	4e-20
P08299	168	Pathogenesis-related prot	N/A	no	0.723	0.654	0.4	4e-20
Q05968	164	Pathogenesis-related prot	N/A	no	0.743	0.689	0.394	1e-19
P35793	164	Pathogenesis-related prot	N/A	no	0.743	0.689	0.403	3e-17
P33154	161	Pathogenesis-related prot	no	no	0.723	0.683	0.353	4e-16
Q41359	167	Pathogenesis-related prot	N/A	no	0.743	0.676	0.368	9e-16

>sp|Q40374|PR1_MEDTR Pathogenesis-related protein PR-1 OS=Medicago truncatula GN=PR-1 PE=2 SV=1

 Score =  110 bits (274), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 51/110 (46%), Positives = 71/110 (64%)

Query: 42  RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
           R+   Q+ + + I +A +GL PL W  KL ++A W+ NQ+R DC L HSN  +GE++FWG
Sbjct: 35  RSFKNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCALEHSNGPYGENIFWG 94

Query: 102 SGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           SG  W  A AV+AW  E+ +YN+  NSC   + C  YTQ+VW  + KVGC
Sbjct: 95  SGVGWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYTQVVWGSTTKVGC 144

Probably involved in the defense reaction of plants against pathogens.
Medicago truncatula (taxid: 3880)

>sp|P09042|PR1C_TOBAC Pathogenesis-related protein 1C OS=Nicotiana tabacum PE=2 SV=3

 Score =  100 bits (249), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 17/150 (11%)

Query: 2   EIRALFSCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKAKLGL 61
           ++ + F  + L +FL+   S CH                 +N+ Q Y       +A +G+
Sbjct: 8   QMSSFFLVSTLLLFLIISHS-CH----------------AQNSQQDYLDAHNTARADVGV 50

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGY 121
            PL W  ++A +A  + +Q   DC+LVHS+  +GE+L WGSG    +A AV  W  E+ Y
Sbjct: 51  EPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQY 110

Query: 122 YNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           Y H +N+C++ + C  YTQ+VWR S++VGC
Sbjct: 111 YAHDSNTCAQGQVCGHYTQVVWRNSVRVGC 140

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q00008|PRMS_MAIZE Pathogenesis-related protein PRMS OS=Zea mays GN=PRMS PE=2 SV=1

 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 68/111 (61%), Gaps = 1/111 (0%)

Query: 42  RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
            N+ Q Y   +   +A +G+ P+ W  KL  FA  +  Q+  DC L HS   +GE++FWG
Sbjct: 28  ENSPQDYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAAQRAGDCRLQHSGGPYGENIFWG 87

Query: 102 S-GKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           S G +WK+ DAV +W  E+ +YN+ TNSC+  K C  YTQ+VWR +  +GC
Sbjct: 88  SAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHYTQVVWRATTSIGC 138

Probably involved in the defense reaction of plants against pathogens.

Zea mays (taxid: 4577)

>sp|P07053|PR1B_TOBAC Pathogenesis-related protein 1B OS=Nicotiana tabacum PE=2 SV=1

 Score = 99.0 bits (245), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 70/113 (61%)

Query: 39  SPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESL 98
           S  +N+ Q Y       +A +G+ PL W   +A +A  +V+Q   DC+LVHS+  +GE+L
Sbjct: 28  SHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYVSQLAADCNLVHSHGQYGENL 87

Query: 99  FWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             GSG    +A AV  W  E+ YY+H +N+C++ + C  YTQ+VWR S++VGC
Sbjct: 88  AQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGC 140

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|P35792|PR12_HORVU Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare PE=2 SV=1

 Score = 97.1 bits (240), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 47/114 (41%), Positives = 69/114 (60%), Gaps = 1/114 (0%)

Query: 39  SPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESL 98
           S  +N+ Q Y       ++ +G+  + W  KL  FA  + NQ+  DC L HS   +GE++
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 99  FWGS-GKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           FWGS G +WK+ADAV +W  E+  YN+ +N+C+  K C  YTQ+VWR S  +GC
Sbjct: 82  FWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVWRASTSIGC 135

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P08299|PR1A_TOBAC Pathogenesis-related protein 1A OS=Nicotiana tabacum PE=1 SV=1

 Score = 96.7 bits (239), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/110 (40%), Positives = 69/110 (62%)

Query: 42  RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
           +N+ Q Y       +A +G+ PL W  ++A +A  + +Q   DC+LVHS+  +GE+L  G
Sbjct: 31  QNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAADCNLVHSHGQYGENLAEG 90

Query: 102 SGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           SG    +A AV  W  E+ YY+H +N+C++ + C  YTQ+VWR S++VGC
Sbjct: 91  SGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVWRNSVRVGC 140

Probably involved in the defense reaction of plants against pathogens.

Nicotiana tabacum (taxid: 4097)

>sp|Q05968|PR1_HORVU Pathogenesis-related protein 1 OS=Hordeum vulgare PE=2 SV=1

 Score = 95.5 bits (236), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/114 (39%), Positives = 70/114 (61%), Gaps = 1/114 (0%)

Query: 39  SPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESL 98
           S  +N+ Q Y       ++ +G+  + W  KL  FA  + NQ+  DC L HS   +GE++
Sbjct: 22  SQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 99  FWGS-GKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           FWGS G +WK++DAV +W +E+  Y++ +N+C+  K C  YTQ+VWR S  +GC
Sbjct: 82  FWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGC 135

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P35793|PR13_HORVU Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare PE=2 SV=1

 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 1/114 (0%)

Query: 39  SPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESL 98
           S  +N+ Q Y       +A +G+  + W  KL  FA  + NQ+  DC L HS   +GE++
Sbjct: 22  SQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRINDCKLQHSGGPYGENI 81

Query: 99  FWGS-GKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           FWGS G +WK++DAV +W +E+  Y++ +N+C+  K C  YTQ+VWR S  +GC
Sbjct: 82  FWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVWRASTSIGC 135

Probably involved in the defense reaction of plants against pathogens.

Hordeum vulgare (taxid: 4513)

>sp|P33154|PR1_ARATH Pathogenesis-related protein 1 OS=Arabidopsis thaliana GN=At2g14610 PE=1 SV=1

 Score = 84.0 bits (206), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 3/113 (2%)

Query: 39  SPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESL 98
           S  +++ Q Y       +  +G+ P+QW +++A +A  +  Q R +C L+HS   +GE+L
Sbjct: 24  SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENL 83

Query: 99  FWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
            WGSG +     AV  W +E+  YN+  N+C+    C  YTQ+VWR+S+++GC
Sbjct: 84  AWGSG-DLSGVSAVNMWVSEKANYNYAANTCNGV--CGHYTQVVWRKSVRLGC 133

Partially responsible for acquired pathogen resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|Q41359|PR1_SAMNI Pathogenesis-related protein PR-1 type OS=Sambucus nigra PE=2 SV=1

 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 1/114 (0%)

Query: 39  SPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHS-NSNHGES 97
           S  +N+ Q Y       ++ + + P+ W + +A FA  +   +  DC LVHS +  +GE+
Sbjct: 26  SVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRLVHSGDPRYGEN 85

Query: 98  LFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           L +GSG      +AV  W AE+  YN  TN+C+  K C  YTQ+VWR S+++GC
Sbjct: 86  LAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNSVRIGC 139

Probably involved in the defense reaction of plants against pathogens.

Sambucus nigra (taxid: 4202)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
255567116	171	STS14 protein precursor, putative [Ricin	0.730	0.649	0.666	1e-36
224143430	134	predicted protein [Populus trichocarpa]	0.697	0.791	0.669	2e-36
116790124	177	unknown [Picea sitchensis]	0.723	0.621	0.509	4e-28
15235962	185	putative pathogenesis-related protein [A	0.776	0.637	0.512	1e-27
361067289	133	Pinus taeda anonymous locus 0_15252_01 g	0.723	0.827	0.490	4e-27
376335851	133	hypothetical protein 0_15252_01, partial	0.723	0.827	0.490	4e-27
361067291	133	Pinus taeda anonymous locus 0_15252_01 g	0.723	0.827	0.490	4e-27
297798832	186	hypothetical protein ARALYDRAFT_491590 [	0.723	0.591	0.522	4e-26
255583299	179	STS14 protein precursor, putative [Ricin	0.756	0.642	0.454	2e-25
297799412	208	hypothetical protein ARALYDRAFT_492241 [	0.697	0.509	0.481	1e-24

>gi|255567116|ref|XP_002524540.1| STS14 protein precursor, putative [Ricinus communis] gi|223536214|gb|EEF37867.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  157 bits (397), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 89/111 (80%)

Query: 41  QRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFW 100
           QR TI+QY       +AKLGL PL+W  KLA+FAS W +Q++ DC L+HSNSN+GE+LFW
Sbjct: 33  QRETIKQYLKPHNRERAKLGLRPLKWSNKLASFASSWAHQRQGDCALLHSNSNYGENLFW 92

Query: 101 GSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           GSGK+WK  DAVAAWA E+ YYNH TN+C++ KDCL YTQMVWRQSLKVGC
Sbjct: 93  GSGKDWKPGDAVAAWAEEKCYYNHNTNTCTKNKDCLHYTQMVWRQSLKVGC 143

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224143430|ref|XP_002324953.1| predicted protein [Populus trichocarpa] gi|222866387|gb|EEF03518.1| predicted protein [Populus trichocarpa]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/106 (66%), Positives = 89/106 (83%)

Query: 46  QQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKN 105
           +QY V   + + KLGLPPL+W KKLANFAS W +Q++ DC L+HSNS++GE+LFWGSGK+
Sbjct: 1   EQYLVPHNLEREKLGLPPLRWSKKLANFASSWAHQRQEDCALIHSNSDYGENLFWGSGKD 60

Query: 106 WKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           WK+ DAVAAWA E+G YN+KTN+C+  KDCL YTQ+VWRQSLKVGC
Sbjct: 61  WKAGDAVAAWAEEKGDYNYKTNTCAHNKDCLHYTQIVWRQSLKVGC 106

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116790124|gb|ABK25508.1| unknown [Picea sitchensis]

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 56/110 (50%), Positives = 79/110 (71%)

Query: 42  RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
           RN + Q+   +  ++AK+G PPL+W + LA++A WW NQ+R DC L HSN  +GE++FWG
Sbjct: 40  RNMVAQFLAPQNQMRAKVGDPPLRWSQTLAHYAQWWANQRRWDCSLTHSNGPYGENIFWG 99

Query: 102 SGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           SGK+W+  DAV+AW  E  +YN+  NSC+ Y+ C  YTQ+VWR+S  VGC
Sbjct: 100 SGKDWQPKDAVSAWIGEYRWYNYNRNSCNGYQQCGHYTQIVWRKSRSVGC 149

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235962|ref|NP_194875.1| putative pathogenesis-related protein [Arabidopsis thaliana] gi|5262758|emb|CAB45906.1| pathogenesis-related protein homolog [Arabidopsis thaliana] gi|7270050|emb|CAB79865.1| pathogenesis-related protein homolog [Arabidopsis thaliana] gi|332660517|gb|AEE85917.1| putative pathogenesis-related protein [Arabidopsis thaliana]

 Score =  127 bits (320), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 63/123 (51%), Positives = 81/123 (65%), Gaps = 5/123 (4%)

Query: 30  FHQDVYLKGSPQRNTIQQ-YPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLV 88
           F QD  L     RNTIQQ +     I++AKL LPPL+W   LA +AS W   +R DC L+
Sbjct: 39  FSQDKALA----RNTIQQQFLRPHNILRAKLRLPPLKWSNSLALYASRWARTRRGDCKLI 94

Query: 89  HSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLK 148
           HS   +GE+LFWGSGK W   DAVAAWA+E  YY+ +T+ C    DCL YTQ+VW++S +
Sbjct: 95  HSGGPYGENLFWGSGKGWTPRDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSR 154

Query: 149 VGC 151
           +GC
Sbjct: 155 IGC 157

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|361067289|gb|AEW07956.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence

 Score =  126 bits (316), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 79/110 (71%)

Query: 42  RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
           RN + Q+   +  ++AK+G PPL+W + LA++A WW NQ+R DC L HS+  +GE++FWG
Sbjct: 2   RNMVAQFLAPQNQMRAKVGDPPLRWSQTLAHYAQWWANQRRWDCSLTHSHGPYGENIFWG 61

Query: 102 SGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           SGK+W+  DAV+AW  E  +YN+  NSC+ Y+ C  YTQ+VW++S  VGC
Sbjct: 62  SGKDWQPKDAVSAWVGEYKWYNYNRNSCNGYQQCGHYTQIVWKKSRSVGC 111

Source: Pinus lambertiana

Species: Pinus lambertiana

Genus: Pinus

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|376335851|gb|AFB32585.1| hypothetical protein 0_15252_01, partial [Pinus mugo] gi|376335853|gb|AFB32586.1| hypothetical protein 0_15252_01, partial [Pinus mugo] gi|376335855|gb|AFB32587.1| hypothetical protein 0_15252_01, partial [Pinus mugo]

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 79/110 (71%)

Query: 42  RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
           RN + Q+   +  ++AK+G PPL+W + LA++A WW NQ+R DC L HS+  +GE++FWG
Sbjct: 2   RNMVAQFLAPQNQMRAKVGDPPLRWSQTLAHYAQWWANQRRWDCSLTHSHGPYGENIFWG 61

Query: 102 SGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           SGK+W+  DAV+AW  E  +YN+  NSC+ Y+ C  YTQ+VW++S  VGC
Sbjct: 62  SGKDWQPKDAVSAWIGEYKWYNYNRNSCNDYQQCGHYTQIVWKKSRSVGC 111

Source: Pinus mugo

Species: Pinus mugo

Genus: Pinus

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|361067291|gb|AEW07957.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129174|gb|AFG45271.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129176|gb|AFG45272.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129178|gb|AFG45273.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129180|gb|AFG45274.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129182|gb|AFG45275.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129184|gb|AFG45276.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129186|gb|AFG45277.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129188|gb|AFG45278.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129190|gb|AFG45279.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129192|gb|AFG45280.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129194|gb|AFG45281.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129196|gb|AFG45282.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129198|gb|AFG45283.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129200|gb|AFG45284.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129202|gb|AFG45285.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129204|gb|AFG45286.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129206|gb|AFG45287.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence gi|383129208|gb|AFG45288.1| Pinus taeda anonymous locus 0_15252_01 genomic sequence

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/110 (49%), Positives = 79/110 (71%)

Query: 42  RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
           RN + Q+   +  ++AK+G PPL+W + LA++A WW NQ+R DC L HS+  +GE++FWG
Sbjct: 2   RNMVAQFLAPQNQMRAKVGDPPLRWSQTLAHYAQWWANQRRWDCSLTHSHGPYGENIFWG 61

Query: 102 SGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           SGK+W+  DAV+AW  E  +YN+  NSC+ Y+ C  YTQ+VW++S  VGC
Sbjct: 62  SGKDWQPKDAVSAWIGEYKWYNYNRNSCNDYQQCGHYTQIVWKKSRSVGC 111

Source: Pinus radiata

Species: Pinus radiata

Genus: Pinus

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798832|ref|XP_002867300.1| hypothetical protein ARALYDRAFT_491590 [Arabidopsis lyrata subsp. lyrata] gi|297313136|gb|EFH43559.1| hypothetical protein ARALYDRAFT_491590 [Arabidopsis lyrata subsp. lyrata]

 Score =  122 bits (307), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 58/111 (52%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 42  RNTIQQ-YPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFW 100
           RNTIQQ +     I++AKL LPPL+W   LA +AS W   +  DC L+HS   +GE+LFW
Sbjct: 48  RNTIQQQFLRPHNILRAKLRLPPLKWSNSLALYASRWAQTRGGDCKLIHSGGPYGENLFW 107

Query: 101 GSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           GSGK W   DAVAAWA+E  YY+ +T  C    DCL YTQ+VW++S ++GC
Sbjct: 108 GSGKGWTPRDAVAAWASEMKYYDRRTYHCKVNGDCLHYTQLVWKKSSRIGC 158

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255583299|ref|XP_002532413.1| STS14 protein precursor, putative [Ricinus communis] gi|223527887|gb|EEF29977.1| STS14 protein precursor, putative [Ricinus communis]

 Score =  120 bits (300), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/121 (45%), Positives = 79/121 (65%), Gaps = 6/121 (4%)

Query: 31  HQDVYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHS 90
           HQ  YL      +T  Q+       +A L +PPL W  +LAN+A W+ NQ+R DCDL HS
Sbjct: 36  HQHAYL------STANQFLGPHNAARAALRMPPLIWDTRLANYAQWYANQRRFDCDLRHS 89

Query: 91  NSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVG 150
           N  +GE++FWGSG  W  A AV AW +E+ +YN+ +NSC  +++C  YTQ+VWR++ ++G
Sbjct: 90  NGPYGENIFWGSGTGWTPAQAVTAWVSERKWYNYWSNSCYGHQECGHYTQIVWRKTRRIG 149

Query: 151 C 151
           C
Sbjct: 150 C 150

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297799412|ref|XP_002867590.1| hypothetical protein ARALYDRAFT_492241 [Arabidopsis lyrata subsp. lyrata] gi|297313426|gb|EFH43849.1| hypothetical protein ARALYDRAFT_492241 [Arabidopsis lyrata subsp. lyrata]

 Score =  117 bits (294), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 69/106 (65%)

Query: 46  QQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKN 105
           QQ+      V+  LGLPPL W  K+A++A+WW NQ+R DC L HS   +GE+LFWGSG +
Sbjct: 74  QQFLDPHNTVRGNLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGSGSD 133

Query: 106 WKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           + S  AV +W  E   YNH TN+C     C  YTQ+VWR++ ++GC
Sbjct: 134 FTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGC 179

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	152
TAIR|locus:2125244	185	AT4G31470 "AT4G31470" [Arabido	0.723	0.594	0.468	6.6e-26
TAIR|locus:504954862	207	AT5G57625 "AT5G57625" [Arabido	0.638	0.468	0.494	2.6e-24
TAIR|locus:2117547	210	AT4G25790 "AT4G25790" [Arabido	0.697	0.504	0.452	5.3e-24
TAIR|locus:2118771	161	AT4G30320 "AT4G30320" [Arabido	0.690	0.652	0.433	6.1e-23
TAIR|locus:2035317	241	AT1G01310 "AT1G01310" [Arabido	0.697	0.439	0.405	3.9e-21
TAIR|locus:2031055	161	AT1G50060 "AT1G50060" [Arabido	0.723	0.683	0.381	1.1e-18
TAIR|locus:2117537	190	AT4G25780 "AT4G25780" [Arabido	0.690	0.552	0.376	1.4e-18
TAIR|locus:2075039	186	AT3G09590 "AT3G09590" [Arabido	0.927	0.758	0.344	3.6e-18
TAIR|locus:2134178	163	AT4G33720 "AT4G33720" [Arabido	0.802	0.748	0.335	4.7e-16
TAIR|locus:2064294	161	PR1 "AT2G14610" [Arabidopsis t	0.723	0.683	0.327	4.2e-15

TAIR|locus:2125244 AT4G31470 "AT4G31470" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 52/111 (46%), Positives = 69/111 (62%)

Query:    42 RNTIQQ-YPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFW 100
             RNTIQQ +     I++AKL LPPL+W   LA +AS W   +R DC L+HS   +GE+LFW
Sbjct:    47 RNTIQQQFLRPHNILRAKLRLPPLKWSNSLALYASRWARTRRGDCKLIHSGGPYGENLFW 106

Query:   101 GSGKNWKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             GSGK W           E  YY+ +T+ C    DCL YTQ+VW++S ++GC
Sbjct:   107 GSGKGWTPRDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGC 157

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504954862 AT5G57625 "AT5G57625" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 48/97 (49%), Positives = 61/97 (62%)

Query:    55 VKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSXXXXXX 114
             +++ LGLPPL W  KLA++A+WW NQ+R DC L HS   +GE+LFWGSG +W        
Sbjct:    82 LRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGPYGENLFWGSGSSWAPGFAVQS 141

Query:   115 XXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
                E   YNH TNSC     C  YTQMVWR + ++GC
Sbjct:   142 WIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGC 178

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117547 AT4G25790 "AT4G25790" [Arabidopsis thaliana (taxid:3702)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 48/106 (45%), Positives = 65/106 (61%)

Query:    46 QQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKN 105
             QQ+      V+  LGLPPL W  K+A++A+WW NQ+R DC L HS   +GE+LFWGSG +
Sbjct:    76 QQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGSGSD 135

Query:   106 WKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             + S         E   YNH TN+C     C  YTQ+VWR++ ++GC
Sbjct:   136 FTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGC 181

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

TAIR|locus:2118771 AT4G30320 "AT4G30320" [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 46/106 (43%), Positives = 64/106 (60%)

Query:    46 QQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKN 105
             +Q+   +   +A L L PL+W  KLA +A WW NQ+R DC L HSN  +GE+LFWGSG  
Sbjct:    28 EQFMGPQNAARAHLRLKPLKWDAKLARYAQWWANQRRGDCALTHSNGPYGENLFWGSGNR 87

Query:   106 WKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             W           E   YN+++NSC+  + C  YTQ+VW+ + K+GC
Sbjct:    88 WGPSQAAYGWLSEARSYNYRSNSCNS-EMCGHYTQIVWKNTQKIGC 132

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0010054 "trichoblast differentiation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

TAIR|locus:2035317 AT1G01310 "AT1G01310" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 43/106 (40%), Positives = 61/106 (57%)

Query:    46 QQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKN 105
             +++ +   +V+A++G PP QW  +LA +A  W NQ+  DC LVHSN  +GE++FW    N
Sbjct:    86 REFLIAHNLVRARVGEPPFQWDGRLAAYARTWANQRVGDCRLVHSNGPYGENIFWAGKNN 145

Query:   106 WKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             W           E  +Y+ K N+C     C  YTQ+VWR S KVGC
Sbjct:   146 WSPRDIVNVWADEDKFYDVKGNTCEPQHMCGHYTQIVWRDSTKVGC 191

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2031055 AT1G50060 "AT1G50060" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 42/110 (38%), Positives = 67/110 (60%)

Query:    42 RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
             +NT Q Y  +    +A++G+P + W   LA +A  + N ++ DC+LVHSN  +GE+L  G
Sbjct:    24 QNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKADCNLVHSNGPYGENLAKG 83

Query:   102 SGKNWKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             S  ++ +         E+ YY++  N+C+  K CL YTQ+VWR S+K+GC
Sbjct:    84 SSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWRDSVKIGC 133

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117537 AT4G25780 "AT4G25780" [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
 Identities = 41/109 (37%), Positives = 62/109 (56%)

Query:    47 QYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNH----GESLFWGS 102
             Q+     +V+A    PPL W ++L N+A  W NQ+R DC L HS SN     GE+++WG 
Sbjct:    54 QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGY 113

Query:   103 GKNWKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             G NW           E+ +Y++ +N+C   + C  YTQ+VW+ + +VGC
Sbjct:   114 GANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGC 162

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2075039 AT3G09590 "AT3G09590" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 52/151 (34%), Positives = 77/151 (50%)

Query:     8 SCALLGIFLLFLQSHCHNLAINFHQDVYLKGSPQRNTIQQYPVTRKIVKA------KLGL 61
             SC LL +FLLF   H   L  +   D     +   N  ++  ++R+ ++A        G+
Sbjct:    10 SCLLL-LFLLF-SGHPSVLGTSI-PDAVNTAARLVNRARRAKLSREFLQAHNDARVSSGV 66

Query:    62 PPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKN-WKSXXXXXXXXXEQG 120
             P L W + LA FA  W  Q++ DC ++HS   +GE++FW   K  W           E+ 
Sbjct:    67 PTLGWDRDLARFADKWAKQRKSDCSMIHSGGPYGENIFWHRRKKTWSPEKVVTRWFEERF 126

Query:   121 YYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
              Y+ KTN+C+  K C  YTQMVWR++  VGC
Sbjct:   127 NYDVKTNTCAPGKMCGHYTQMVWRETTAVGC 157

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2134178 AT4G33720 "AT4G33720" [Arabidopsis thaliana (taxid:3702)]

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 43/128 (33%), Positives = 74/128 (57%)

Query:    26 LAINFHQD--VYLKGSPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRR 83
             LAI F     V+LK    +++ Q +       +A++G+ PL+W +K+A +A  + NQ++ 
Sbjct:    12 LAITFFLVLIVHLKA---QDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKG 68

Query:    84 DCDLVHSNSNHGESLFWGSGKNWKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVW 143
             DC + HS+ ++GE++ W SG +            EQ  Y++ +N+C+  K C  YTQ+VW
Sbjct:    69 DCAMKHSSGSYGENIAWSSG-SMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVW 127

Query:   144 RQSLKVGC 151
             R S ++GC
Sbjct:   128 RNSERLGC 135

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IEA;ISS

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2064294 PR1 "AT2G14610" [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 37/113 (32%), Positives = 63/113 (55%)

Query:    39 SPQRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESL 98
             S  +++ Q Y       +  +G+ P+QW +++A +A  +  Q R +C L+HS   +GE+L
Sbjct:    24 SKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQLRGNCRLIHSGGPYGENL 83

Query:    99 FWGSGKNWKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
              WGSG +            E+  YN+  N+C+    C  YTQ+VWR+S+++GC
Sbjct:    84 AWGSG-DLSGVSAVNMWVSEKANYNYAANTCNGV--CGHYTQVVWRKSVRLGC 133

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;ISS

GO:0009627 "systemic acquired resistance" evidence=IEP;RCA

GO:0005618 "cell wall" evidence=IDA

GO:0010266 "response to vitamin B1" evidence=IEP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0006952 "defense response" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.XVIII.2209.1 hypothetical protein (134 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	152
cd05381	136	cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like ex	4e-47
smart00198	144	smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 fa	2e-18
cd00168	122	cd00168, SCP, SCP: SCP-like extracellular protein	4e-14
cd05380	144	cd05380, SCP_euk, SCP_euk: SCP-like extracellular	4e-13
cd05559	136	cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracel	4e-13
cd05384	129	cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like ex	6e-12
cd05382	132	cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-lik	1e-11
cd05385	144	cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-l	3e-11
pfam00188	121	pfam00188, CAP, Cysteine-rich secretory protein fa	3e-08
cd05383	138	cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellu	4e-05

>gnl|CDD|240181 cd05381, SCP_PR-1_like, SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

 Score =  148 bits (377), Expect = 4e-47
 Identities = 51/97 (52%), Positives = 72/97 (74%)

Query: 55  VKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAA 114
            +A +G+PPL+W   LA +A  + NQ+R DC LVHSN  +GE+LFWGSG NW +ADAVA+
Sbjct: 11  ARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGGNWSAADAVAS 70

Query: 115 WAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           W +E+ YY++ +N+C+  K C  YTQ+VWR + +VGC
Sbjct: 71  WVSEKKYYDYDSNTCAAGKMCGHYTQVVWRNTTRVGC 107

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|214553 smart00198, SCP, SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

 Score = 75.9 bits (187), Expect = 2e-18
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 11/97 (11%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSNS--NHGESLFWGSG----KNWKSADAVAAW 115
             L W  +LA+ A  W NQ    C   HS     +GE+L W S      +  ++ AV  W
Sbjct: 31  LKLTWDCELASSAQNWANQ----CPFGHSTPRPGYGENLAWWSSSTALPDTYASAAVQLW 86

Query: 116 AAEQGYYNHKTNSC-SRYKDCLRYTQMVWRQSLKVGC 151
             E   Y + +N+C         YTQ+VW ++ KVGC
Sbjct: 87  YDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGC 123

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function. Length = 144

>gnl|CDD|238097 cd00168, SCP, SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

 Score = 64.0 bits (156), Expect = 4e-14
 Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 60  GLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNH----GESLFWGSGKNWKSADAVAAW 115
           G+ P+ W  +LA  A  + N     C   HS  +     GE+L  GS  +     AV AW
Sbjct: 17  GMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLAAGSY-DMTGPAAVQAW 71

Query: 116 AAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             E   YN      S       YTQ+VW+ + K+GC
Sbjct: 72  YNEIKNYNFGQPGFSS--GTGHYTQVVWKNTTKIGC 105

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. Little is known about the biological roles of the bacterial and archaeal SCP domains. Length = 122

>gnl|CDD|240180 cd05380, SCP_euk, SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

 Score = 62.2 bits (151), Expect = 4e-13
 Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSN----SNHGESLFWGSG----KNWKSADAVA 113
           P L+W  +LA  A  W       C   HS        G++L  GS         + DAV 
Sbjct: 30  PKLKWDDELAALAQNWAKT----CVFEHSPCRNTGGVGQNLAAGSSTGSTVEELAEDAVN 85

Query: 114 AWAAEQGYYNHKTNS-CSRYKDCLRYTQMVWRQSLKVGC 151
           AW  E   Y   +N   +       +TQMVW ++ KVGC
Sbjct: 86  AWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGC 124

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|240186 cd05559, SCP_HrTT-1, SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

 Score = 62.1 bits (151), Expect = 4e-13
 Identities = 24/57 (42%), Positives = 35/57 (61%)

Query: 95  GESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           GE+LF  +G  + +  AV  W  E+  YN+ TN+C+  K C  YTQ+VW  + K+GC
Sbjct: 56  GENLFISTGPPFDATKAVEDWNNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGC 112

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 136

>gnl|CDD|240184 cd05384, SCP_PRY1_like, SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

 Score = 58.9 bits (143), Expect = 6e-12
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 60  GLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQ 119
           G+ PL W   LA +A  + N      +L HS   +GE+L  G         AV AW  E 
Sbjct: 18  GVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLAAGYP---SGTSAVDAWYDEI 74

Query: 120 GYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             Y++  ++    +    +TQ+VW+ + +VGC
Sbjct: 75  EDYDY--SNPGFSEATGHFTQLVWKSTTQVGC 104

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune. Length = 129

>gnl|CDD|240182 cd05382, SCP_GAPR-1_like, SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

 Score = 58.0 bits (141), Expect = 1e-11
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 5/97 (5%)

Query: 57  AKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHS-NSNHGESLFWGSGKNWKSA--DAVA 113
           A  G PPL+  K+LA  A  W  +      L HS  S +GE+L + SG        +AV 
Sbjct: 15  ALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGSGPDLTGEEAVD 74

Query: 114 AWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVG 150
           +W  E   Y+      S       +TQ+VW+ S ++G
Sbjct: 75  SWYNEIKKYDFNKPGFS--SKTGHFTQVVWKSSTELG 109

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms. Length = 132

>gnl|CDD|240185 cd05385, SCP_GLIPR-1_like, SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

 Score = 57.4 bits (139), Expect = 3e-11
 Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 2/57 (3%)

Query: 95  GESLFWGSGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           GE+++ GS   +   +AV +W  E  +Y+  TNSCSR   C  YTQ+VW  S KVGC
Sbjct: 66  GENIWLGSIYIFSPKNAVTSWYNEGKFYDFDTNSCSR--VCGHYTQVVWATSYKVGC 120

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Length = 144

>gnl|CDD|215778 pfam00188, CAP, Cysteine-rich secretory protein family

 Score = 49.1 bits (117), Expect = 3e-08
 Identities = 24/97 (24%), Positives = 32/97 (32%), Gaps = 2/97 (2%)

Query: 56  KAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKS-ADAVAA 114
            A  G PPL W   LA  A                +     +L   +GK       AV  
Sbjct: 9   SAAGGAPPLSWDPTLAAAAQDHAAYCAD-NGYFGHDYGENLALVSVAGKADDPGVAAVEN 67

Query: 115 WAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           W  E   Y+      +        T ++W +S KVGC
Sbjct: 68  WYDEAKDYDAAVGINAWMSSPGHRTNLLWPKSTKVGC 104

This is a large family of cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) that are found in a wide range of organisms, including prokaryotes and non-vertebrate eukaryotes, The nine subfamilies of the mammalian CAP 'super'family include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins. Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP 'super'family results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences. The Ca++-chelating function would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine from Heloderma horridum horridum blocks the Ca++ transporting ryanodine receptors. Length = 121

>gnl|CDD|240183 cd05383, SCP_CRISP, SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

 Score = 40.8 bits (96), Expect = 4e-05
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 15/95 (15%)

Query: 66  WRKKLANFASWWVNQQRRDCDLVHSNSNH--------GESLFWGSGK-NWKSADAVAAWA 116
           W ++ A  A  W N     C+L HS  N         GE++F  S   +W  +D + AW 
Sbjct: 29  WNEEAAQNAKKWANT----CNLTHSPPNGRTIGGITCGENIFMSSYPRSW--SDVIQAWY 82

Query: 117 AEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
            E   + +   +         YTQ+VW +S  VGC
Sbjct: 83  DEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGC 117

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ transporting ryanodine receptors. One member, DE or CRISP-1, has been shown to mediate gamete fusion by binding to the egg surface; a sequence motif in the SCP domain plays a role in that binding. Length = 138

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	152
cd05381	136	SCP_PR-1_like SCP_PR-1_like: SCP-like extracellula	100.0
cd05384	129	SCP_PRY1_like SCP_PRY1_like: SCP-like extracellula	99.98
cd05382	132	SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracel	99.97
cd05559	136	SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular prot	99.97
cd05385	144	SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extrac	99.97
cd00168	122	SCP SCP: SCP-like extracellular protein domain, fo	99.97
smart00198	144	SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extra	99.97
cd05383	138	SCP_CRISP SCP_CRISP: SCP-like extracellular protei	99.97
cd05380	144	SCP_euk SCP_euk: SCP-like extracellular protein do	99.96
KOG3017	225	consensus Defense-related protein containing SCP d	99.94
TIGR02909	127	spore_YkwD uncharacterized protein, YkwD family. M	99.85
PF00188	124	CAP: Cysteine-rich secretory protein family; Inter	99.76
cd05379	122	SCP_bacterial SCP_bacterial: SCP-like extracellula	99.69
COG2340	207	Uncharacterized protein with SCP/PR1 domains [Func	99.51
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	87.78
PF12273	130	RCR: Chitin synthesis regulation, resistance to Co	82.4

>cd05381 SCP_PR-1_like SCP_PR-1_like: SCP-like extracellular protein domain, PR-1 like subfamily

Probab=100.00  E-value=1.4e-33  Score=196.22  Aligned_cols=107  Identities=49%  Similarity=0.999  Sum_probs=99.2

Q ss_pred             hhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCCCccceeeeccCCCCCHHHHHHHHHhccccCCCC
Q 047831           46 QQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYNHK  125 (152)
Q Consensus        46 ~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y~~~  125 (152)
                      ++||+.||.+|+.++++||+||++|+..||.||+.|+..|...|+...+||||+++.....++.++|+.|++|..+|++.
T Consensus         2 ~~il~~hN~~R~~~~~~~L~Wd~~La~~A~~~a~~~~~~c~~~~~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y~~~   81 (136)
T cd05381           2 QDFLDAHNAARAAVGVPPLKWDDTLAAYAQRYANQRRGDCALVHSNGPYGENLFWGSGGNWSAADAVASWVSEKKYYDYD   81 (136)
T ss_pred             hHHHHHHHHHHHhcCCCcceECHHHHHHHHHHHHHhcCCCCcccCCCCCCceEEEecCCCCCHHHHHHHHHhccccCCCC
Confidence            57999999999999999999999999999999999988899999887899999987654457899999999999999999


Q ss_pred             CCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          126 TNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       126 ~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      .+.|..+..++|||||||++|++||||
T Consensus        82 ~~~~~~~~~~~hftq~vw~~t~~vGCa  108 (136)
T cd05381          82 SNTCAAGKMCGHYTQVVWRNTTRVGCA  108 (136)
T ss_pred             CCCcCCCccchHHHHHHHHhcCEeceE
Confidence            988887788999999999999999997

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. It also includes CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05384 SCP_PRY1_like SCP_PRY1_like: SCP-like extracellular protein domain, PRY1-like sub-family restricted to fungi

Probab=99.98  E-value=3.1e-32  Score=187.82  Aligned_cols=104  Identities=28%  Similarity=0.449  Sum_probs=94.6

Q ss_pred             HHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCCCccceeeeccCCCCCHHHHHHHHHhccccCC
Q 047831           44 TIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYYN  123 (152)
Q Consensus        44 ~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y~  123 (152)
                      +++.||+.||.+|+.+|++||+||++|+..||.||++|+..|.+.|++..+|||++.++.   ++.++|+.|++|..+|+
T Consensus         2 ~~~~iL~~hN~~R~~~g~~~L~w~~~La~~A~~~a~~c~~~~~~~~~~~~~geNi~~~~~---~~~~~v~~W~~e~~~y~   78 (129)
T cd05384           2 FASSILDAHNSKRALHGVQPLTWNNTLAEYAQDYANSYDCSGNLAHSGGPYGENLAAGYP---SGTSAVDAWYDEIEDYD   78 (129)
T ss_pred             HHHHHHHHHHHHHHHcCCCcCccCHHHHHHHHHHHHHhccCCceecCCCCCCcEEEEecC---CHHHHHHHHHhhhhhCC
Confidence            588999999999999999999999999999999999887777789998889999987653   78999999999999999


Q ss_pred             CCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          124 HKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       124 ~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      |..+.+  +..++|||||||++|++||||
T Consensus        79 ~~~~~~--~~~~~h~tqmvw~~t~~vGCa  105 (129)
T cd05384          79 YSNPGF--SEATGHFTQLVWKSTTQVGCA  105 (129)
T ss_pred             CCCCCC--CCcccchhhhhhhccceeeeE
Confidence            987654  367899999999999999997

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. PRY1 is a yeast protein that is up-regulated in core ESCRT mutants. This PRY1-like group also contains fruiting body proteins SC7/14 from Schizophyllum commune.

>cd05382 SCP_GAPR-1_like SCP_GAPR-1_like: SCP-like extracellular protein domain, golgi-associated plant pathogenesis related protein (GAPR)-like sub-family

Probab=99.97  E-value=6.7e-32  Score=186.51  Aligned_cols=108  Identities=27%  Similarity=0.433  Sum_probs=96.4

Q ss_pred             hHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCC-CccceeeeccC--CCCCHHHHHHHHHhcc
Q 047831           43 NTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS-NHGESLFWGSG--KNWKSADAVAAWAAEQ  119 (152)
Q Consensus        43 ~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~-~~GeNi~~~~~--~~~~~~~~v~~W~~e~  119 (152)
                      +++++||+.||++|+.+||+||+||++|+..||.||++|+..+.+.|++. .+|||++++..  ....+.++|+.|++|.
T Consensus         1 ~~~~~iL~~hN~~R~~~g~~~L~wd~~La~~A~~~a~~c~~~~~~~h~~~~~~GeN~~~~~~~~~~~~~~~~v~~W~~e~   80 (132)
T cd05382           1 DFQKECLDAHNEYRALHGAPPLKLDKELAKEAQKWAEKLASSGKLQHSSPSGYGENLAYASGSGPDLTGEEAVDSWYNEI   80 (132)
T ss_pred             CHHHHHHHHHHHHHHHcCCCcCeeCHHHHHHHHHHHHHhhhcCceeCCCCCCCCceeEEecCCCCCCCHHHHHHHHHhcc
Confidence            36889999999999999999999999999999999998887777889876 59999998764  3458899999999999


Q ss_pred             ccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          120 GYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       120 ~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      .+|++..+.+  +..+||||||||++|++||||
T Consensus        81 ~~y~~~~~~~--~~~~gh~tqmvw~~t~~vGCa  111 (132)
T cd05382          81 KKYDFNKPGF--SSKTGHFTQVVWKSSTELGVG  111 (132)
T ss_pred             ccCCCCCCCC--CCCCCCeEEeEecCCCceeeE
Confidence            9999985543  367999999999999999997

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. GAPR-1 and GLIPR-2 appear to be synonyms.

>cd05559 SCP_HrTT-1 SCP_HrTT-1: SCP-like extracellular protein domain in HrTT-1, a tail-tip epidermis marker in ascidians

Probab=99.97  E-value=1.9e-31  Score=185.62  Aligned_cols=104  Identities=29%  Similarity=0.575  Sum_probs=93.7

Q ss_pred             HhhHHHHHhHHHHhCC-----CCCCcccHHHHHHHHHHHHHhccCCCccCCCC----CccceeeeccCCCCCHHHHHHHH
Q 047831           45 IQQYPVTRKIVKAKLG-----LPPLQWRKKLANFASWWVNQQRRDCDLVHSNS----NHGESLFWGSGKNWKSADAVAAW  115 (152)
Q Consensus        45 ~~~il~~hN~~R~~~~-----~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~----~~GeNi~~~~~~~~~~~~~v~~W  115 (152)
                      ++.||+.||.+|+.++     |++|+||++|+..||.||+    +|.+.|++.    .+|||++...++..++.++|+.|
T Consensus         1 r~~il~~HN~~R~~~~p~a~~m~~L~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~~~v~~W   76 (136)
T cd05559           1 RLNLVDLHNQYRSQVSPPAANMLKMTWDEELAALAEAYAR----KCIWDHNPDRGHLRVGENLFISTGPPFDATKAVEDW   76 (136)
T ss_pred             CcHHHHHHHHHHhhCCCccccCcccccCHHHHHHHHHHHH----hccccCCCcccCCCceeeeeecCCCCCCHHHHHHHH
Confidence            3679999999999985     5579999999999999999    899988763    69999998765556799999999


Q ss_pred             HhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          116 AAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       116 ~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      |+|..+|+|..+.|..+..++|||||||++|++||||
T Consensus        77 ~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa  113 (136)
T cd05559          77 NNEKLDYNYNTNTCAPNKMCGHYTQVVWANTFKIGCG  113 (136)
T ss_pred             HHHHHhcCCCCCCCCCCCcccchHHHHHhccCccceE
Confidence            9999999999888887788999999999999999997

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd05385 SCP_GLIPR-1_like SCP_GLIPR-1_like: SCP-like extracellular protein domain, glioma pathogenesis-related protein (GLIPR)-like sub-family

Probab=99.97  E-value=3e-31  Score=186.30  Aligned_cols=104  Identities=33%  Similarity=0.650  Sum_probs=92.6

Q ss_pred             hHHhhHHHHHhHHHHhC-----CCCCCcccHHHHHHHHHHHHHhccCCCccCCCC------------CccceeeeccCCC
Q 047831           43 NTIQQYPVTRKIVKAKL-----GLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS------------NHGESLFWGSGKN  105 (152)
Q Consensus        43 ~~~~~il~~hN~~R~~~-----~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~------------~~GeNi~~~~~~~  105 (152)
                      +++++||+.||.+|+.+     +|++|+||++|+..||.||+    +|.+.|++.            .+||||+++....
T Consensus         1 ~f~~~~L~~HN~~R~~~~p~a~~m~~l~Wd~~La~~Aq~~a~----~C~~~~~~~~~~~~~~~~~~~~~GeNi~~~~~~~   76 (144)
T cd05385           1 EFIDECVRIHNELRSKVSPPAANMRYMTWDAALAKTARAWAK----KCKFKHNIYLGKRYKCHPKFTSVGENIWLGSIYI   76 (144)
T ss_pred             CHHHHHHHHHHHHHhhCCCCcccCcccccCHHHHHHHHHHHh----cCCCCCCchhhcccccccccCcccceeeecccCC
Confidence            47889999999999999     58899999999999999999    898888742            4899998776545


Q ss_pred             CCHHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          106 WKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       106 ~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      +++.++|+.||+|..+|+|..+.|.  ..+||||||||++|++||||
T Consensus        77 ~~~~~av~~W~~e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCa  121 (144)
T cd05385          77 FSPKNAVTSWYNEGKFYDFDTNSCS--RVCGHYTQVVWATSYKVGCA  121 (144)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCCC--CcccCHHHHHHhhccccceE
Confidence            6889999999999999999887775  57999999999999999997

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>cd00168 SCP SCP: SCP-like extracellular protein domain, found in eukaryotes and prokaryotes

Probab=99.97  E-value=1.6e-30  Score=177.49  Aligned_cols=100  Identities=33%  Similarity=0.515  Sum_probs=90.0

Q ss_pred             hhHHHHHhHHHHhC-CCCCCcccHHHHHHHHHHHHHhccCCCccCCCC----CccceeeeccCCCCCHHHHHHHHHhccc
Q 047831           46 QQYPVTRKIVKAKL-GLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS----NHGESLFWGSGKNWKSADAVAAWAAEQG  120 (152)
Q Consensus        46 ~~il~~hN~~R~~~-~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~----~~GeNi~~~~~~~~~~~~~v~~W~~e~~  120 (152)
                      ++||+.||.+|+.+ +|+||+||++|+..||.||+    +|.+.|++.    .+||||+++..+ .++..+|+.|++|..
T Consensus         2 ~~il~~hN~~R~~~a~~~~L~wd~~La~~A~~~a~----~c~~~h~~~~~~~~~geNi~~~~~~-~~~~~~v~~W~~e~~   76 (122)
T cd00168           2 QEVVRLHNSYRAKVNGMLPMSWDAELAKTAQNYAN----RCIFKHSGEDGRGFVGENLAAGSYD-MTGPAAVQAWYNEIK   76 (122)
T ss_pred             cHHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHHh----hccccCCCcccCCCCCceeEEecCC-CCHHHHHHHHHHHHH
Confidence            56999999999999 99999999999999999999    899999875    599999987643 589999999999999


Q ss_pred             cCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          121 YYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       121 ~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      +|+|.++.+  +..++||+||||++|++||||
T Consensus        77 ~y~~~~~~~--~~~~~h~~qmvw~~s~~vGca  106 (122)
T cd00168          77 NYNFGQPGF--SSGTGHYTQVVWKNTTKIGCG  106 (122)
T ss_pred             hCCCCCCCC--CCCccchhhhhcccCCeeeeE
Confidence            999985443  467899999999999999997

This family includes plant pathogenesis-related protein 1 (PR-1), which accumulates after infections with pathogens, and may act as an anti-fungal agent or be involved in cell wall loosening. This family also includes CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Roles for CRISP, in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. The human GAPR-1 protein has been reported to dimerize, and such a dimer may form an active site containing a catalytic triad. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as

>smart00198 SCP SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains

Probab=99.97  E-value=1.7e-30  Score=181.86  Aligned_cols=105  Identities=30%  Similarity=0.526  Sum_probs=94.3

Q ss_pred             HHhhHHHHHhHHHHhCC-----------CCCCcccHHHHHHHHHHHHHhccCCCccCCCC-CccceeeeccC----CCCC
Q 047831           44 TIQQYPVTRKIVKAKLG-----------LPPLQWRKKLANFASWWVNQQRRDCDLVHSNS-NHGESLFWGSG----KNWK  107 (152)
Q Consensus        44 ~~~~il~~hN~~R~~~~-----------~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~-~~GeNi~~~~~----~~~~  107 (152)
                      .++.||+.||.+|+.++           |+||+||++|+..||.||+    .|...|+.. .+|||+++..+    ....
T Consensus         2 ~~~~iL~~HN~~R~~~a~G~~~~p~a~~m~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~GeNi~~~~~~~~~~~~~   77 (144)
T smart00198        2 QQQEILDAHNKLRSQVAKGLLANPAASNMLKLTWDCELASSAQNWAN----QCPFGHSTPRGYGENLAWWSSSTDLPITY   77 (144)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCcccccccccCCHHHHHHHHHHHH----hCCCcCCCcCCcCcceEEecccCcccchh
Confidence            47889999999999998           9999999999999999999    899989875 69999987653    2346


Q ss_pred             HHHHHHHHHhccccCCCCCCCCCC-CCCChhHHHHHHHhcCccccC
Q 047831          108 SADAVAAWAAEQGYYNHKTNSCSR-YKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       108 ~~~~v~~W~~e~~~y~~~~~~~~~-~~~~~hftqmvW~~t~~vGCa  152 (152)
                      +..+|+.||+|..+|++..+.|.. +..++|||||||++|++||||
T Consensus        78 ~~~av~~W~~e~~~y~~~~~~~~~~~~~~~hftqmvw~~s~~vGCa  123 (144)
T smart00198       78 ASAAVQLWYDEFQDYGYSSNTCKDTNGKIGHYTQVVWAKTYKVGCG  123 (144)
T ss_pred             HHHHHHHHHHHHHHcCCCCCccccCccchhHHHHHHHHhcCCcceE
Confidence            888999999999999999888775 678999999999999999997

Human glioma pathogenesis-related protein GliPR and the plant pathogenesis-related protein represent functional links between plant defense systems and human immune system. This family has no known function.

>cd05383 SCP_CRISP SCP_CRISP: SCP-like extracellular protein domain, CRISP-like sub-family

Probab=99.97  E-value=3.1e-30  Score=179.95  Aligned_cols=104  Identities=25%  Similarity=0.450  Sum_probs=92.0

Q ss_pred             HHhhHHHHHhHHHHhCC-----CCCCcccHHHHHHHHHHHHHhccCCCccCCCC--------CccceeeeccCCCCCHHH
Q 047831           44 TIQQYPVTRKIVKAKLG-----LPPLQWRKKLANFASWWVNQQRRDCDLVHSNS--------NHGESLFWGSGKNWKSAD  110 (152)
Q Consensus        44 ~~~~il~~hN~~R~~~~-----~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~--------~~GeNi~~~~~~~~~~~~  110 (152)
                      .++.||+.||.+|+.+.     |++|+||++|+..||.||+    +|.+.|++.        .+|||++.... ..+..+
T Consensus         2 ~~~~il~~HN~~R~~~~p~a~~M~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~~~~~GeNl~~~~~-~~~~~~   76 (138)
T cd05383           2 VQKEIVDLHNELRRSVNPTASNMLKMEWNEEAAQNAKKWAN----TCNLTHSPPNGRTIGGITCGENIFMSSY-PRSWSD   76 (138)
T ss_pred             HHHHHHHHHHHHhccCCCCcccCcccEeCHHHHHHHHHHHh----cCCCcCCchhhcccCCCCcceeeeccCC-CCCHHH
Confidence            47889999999999974     5579999999999999999    899888853        47999987653 247889


Q ss_pred             HHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          111 AVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       111 ~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      +|+.||+|..+|+|+.+.|..+..|+|||||||++|++||||
T Consensus        77 av~~W~~e~~~y~~~~~~~~~~~~~~hftqmvw~~t~~vGCa  118 (138)
T cd05383          77 VIQAWYDEYKDFKYGVGATPPGAVVGHYTQIVWYKSYLVGCA  118 (138)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCchhhHHHHHHHhccccceE
Confidence            999999999999999887777788999999999999999997

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, which combine SCP with a C-terminal cysteine rich domain, and allergen 5 from vespid venom. Involvement of CRISP in response to pathogens, fertilization, and sperm maturation have been proposed. One member, Tex31 from the venom duct of Conus textile, has been shown to possess proteolytic activity sensitive to serine protease inhibitors. SCP has also been proposed to be a Ca++ chelating serine protease. The Ca++-chelating function would fit with various signaling processes that members of this family, such as the CRISPs, are involved in, and is supported by sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how helothermine, a toxic peptide secreted by the beaded lizard, blocks Ca++ t

>cd05380 SCP_euk SCP_euk: SCP-like extracellular protein domain, as found mainly in eukaryotes

Probab=99.96  E-value=3.8e-29  Score=174.35  Aligned_cols=103  Identities=32%  Similarity=0.548  Sum_probs=90.8

Q ss_pred             hhHHHHHhHHHHhC------------CCCCCcccHHHHHHHHHHHHHhccCCCccCCCC----CccceeeeccCCC----
Q 047831           46 QQYPVTRKIVKAKL------------GLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS----NHGESLFWGSGKN----  105 (152)
Q Consensus        46 ~~il~~hN~~R~~~------------~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~----~~GeNi~~~~~~~----  105 (152)
                      +.||+.||.+|+.+            +|++|+||++|+..||.||+    +|...|+..    .+|||++......    
T Consensus         2 ~~il~~HN~~R~~~a~g~~~~~p~a~~m~~l~Wd~~La~~A~~~a~----~C~~~~~~~~~~~~~GeNl~~~~~~~~~~~   77 (144)
T cd05380           2 QAILDAHNELRSKVAKGTYSLLPPASNMPKLKWDDELAALAQNWAK----TCVFEHSPCRNTGGVGQNLAAGSSTGSTVE   77 (144)
T ss_pred             cHHHHHHHHHHHHhhcCCCCCCCchhcCCcceeCHHHHHHHHHHHh----cCCCcCCcccCCCCCCcEEEEeccCCCCHH
Confidence            57999999999999            79999999999999999999    898888864    6999999876432    


Q ss_pred             CCHHHHHHHHHhccccCCCCCC-CCCCCCCChhHHHHHHHhcCccccC
Q 047831          106 WKSADAVAAWAAEQGYYNHKTN-SCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       106 ~~~~~~v~~W~~e~~~y~~~~~-~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ..+.++|+.||+|..+|++... .+..+..++|||||||++|++||||
T Consensus        78 ~~~~~~v~~W~~e~~~~~~~~~~~~~~~~~~~hftq~vw~~t~~vGCa  125 (144)
T cd05380          78 ELAEDAVNAWYNELKDYGFGSNPTNNFNSGIGHFTQMVWAKTTKVGCA  125 (144)
T ss_pred             HHHHHHHHHHHHHHHHcCCCcCcccccccchhHHHHHHHHhcCccceE
Confidence            3588999999999999999875 4445678999999999999999997

This family includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases.

>KOG3017 consensus Defense-related protein containing SCP domain [Function unknown]

Probab=99.94  E-value=3.5e-27  Score=176.57  Aligned_cols=108  Identities=35%  Similarity=0.627  Sum_probs=96.4

Q ss_pred             ChhHHhhHHHHHhHHHHhCC-----CCCCcccHHHHHHHHHHHHHhccCCCccCCC------CCccceeeeccCCC----
Q 047831           41 QRNTIQQYPVTRKIVKAKLG-----LPPLQWRKKLANFASWWVNQQRRDCDLVHSN------SNHGESLFWGSGKN----  105 (152)
Q Consensus        41 ~~~~~~~il~~hN~~R~~~~-----~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~------~~~GeNi~~~~~~~----  105 (152)
                      ..+++++|++.||.+|..++     |++|+||++|+..||.||+    +|.+.|+.      ..+|||++++.+..    
T Consensus        38 ~~~~~~~~~~~hn~~r~~~~~~as~m~~m~Wd~~La~~Aq~~a~----~c~~~~~~~~~~~~~~~GeNl~~~~~~~~~~~  113 (225)
T KOG3017|consen   38 HNNLRSEILNGHNVARGAVGPPASNMMKLKWDDELAALAQNWAN----TCPFGHDKCVHTSFGPYGENLAWGWSSNPPLS  113 (225)
T ss_pred             cHHHHHHHHhhhHHhcCccCCchHhCccccCCHHHHHHHHHHHh----hCCcccCccccccCCCCcccceeeccCCCCcc
Confidence            34789999999999999998     9999999999999999999    78777763      47899999876531    


Q ss_pred             --CCHHHHHHHHHhccccCCCCCCCCCC---CCCChhHHHHHHHhcCccccC
Q 047831          106 --WKSADAVAAWAAEQGYYNHKTNSCSR---YKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       106 --~~~~~~v~~W~~e~~~y~~~~~~~~~---~~~~~hftqmvW~~t~~vGCa  152 (152)
                        .++..+++.|+.|...|++.++.|..   +..|||||||||++|++||||
T Consensus       114 ~~~~~~~a~~~w~~e~~~~~~~~~~~~~~~~~~~~gHyTQ~vw~~s~~vGCg  165 (225)
T KOG3017|consen  114 LDTSGALAVEAWESEFQEYDWSSNTCSSADFGEGIGHYTQMVWAKSTKVGCG  165 (225)
T ss_pred             ccccHHHHHHHHHHHHHHccCcccccCcccCCCcceEEEEEEEeCCceecee
Confidence              46788999999999999999999985   789999999999999999997

>TIGR02909 spore_YkwD uncharacterized protein, YkwD family

Probab=99.85  E-value=3.2e-21  Score=132.74  Aligned_cols=92  Identities=17%  Similarity=0.223  Sum_probs=82.4

Q ss_pred             hhHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCC-----------------CccceeeeccCC
Q 047831           42 RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS-----------------NHGESLFWGSGK  104 (152)
Q Consensus        42 ~~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~-----------------~~GeNi~~~~~~  104 (152)
                      +++++++++.||++|..+|++||+||+.|++.|+.||++|+.++.++|+.+                 .+||||+++.. 
T Consensus         2 ~~~e~~~l~~iN~~R~~~Gl~pL~~~~~L~~~A~~hA~~ma~~~~~~H~~~~~~~~~~r~~~~g~~~~~~gENi~~g~~-   80 (127)
T TIGR02909         2 TAEEKRVVELVNAERAKNGLKPLKADPELSKVARLKSEDMRDKNYFSHTSPTYGSPFDMMKKFGISYRMAGENIAYGNS-   80 (127)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHHhCCcccccCCCCCCHHHHHHHcCCCcccceeeeeccCC-
Confidence            356889999999999999999999999999999999999999999999852                 34999997654 


Q ss_pred             CCCHHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          105 NWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       105 ~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                        ++..+|+.|+++.                +|+.+|+|.+.++||||
T Consensus        81 --~~~~~v~~W~~S~----------------gH~~nil~~~~~~~Gvg  110 (127)
T TIGR02909        81 --TVEAVHNAWMNSP----------------GHRANILNPNYTEIGVG  110 (127)
T ss_pred             --CHHHHHHHHHcCH----------------hHHHHHcCCCcCeEeEE
Confidence              7899999999752                79999999999999996

Members of this protein family represent a subset of those belonging to Pfam family pfam00188 (SCP-like extracellular protein). Based on currently cuttoffs for this model, all member proteins are found in Bacteria capable of endospore formation. Members include a named but uncharacterized protein, YkwD of Bacillus subtilis. Only the C-terminal region is well-conserved and is included in the seed alignment for this model. Three members of this family have an N-terminal domain homologous to the spore coat assembly protein SafA.

>PF00188 CAP: Cysteine-rich secretory protein family; InterPro: IPR014044 The cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins (CAP) superfamily proteins are found in a wide range of organisms, including prokaryotes [] and non-vertebrate eukaryotes [], The nine subfamilies of the mammalian CAP superfamily include: the human glioma pathogenesis-related 1 (GLIPR1), Golgi associated pathogenesis related-1 (GAPR1) proteins, peptidase inhibitor 15 (PI15), peptidase inhibitor 16 (PI16), cysteine-rich secretory proteins (CRISPs), CRISP LCCL domain containing 1 (CRISPLD1), CRISP LCCL domain containing 2 (CRISPLD2), mannose receptor like and the R3H domain containing like proteins

Probab=99.76  E-value=7.4e-19  Score=116.86  Aligned_cols=101  Identities=26%  Similarity=0.377  Sum_probs=69.2

Q ss_pred             HHHHhHHH-HhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCCCccceeeeccCCCCC---HHHHHHHHHhccccCCC
Q 047831           49 PVTRKIVK-AKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWK---SADAVAAWAAEQGYYNH  124 (152)
Q Consensus        49 l~~hN~~R-~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~~~GeNi~~~~~~~~~---~~~~v~~W~~e~~~y~~  124 (152)
                      |+.||++| ...+++||+||++|+..|+.+|++|+......|   ..|++..........   ....++.|+.+...+++
T Consensus         1 L~~~N~~R~~~~~~~~L~~d~~L~~~A~~~a~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (124)
T PF00188_consen    1 LDLHNEYRSAANGLPPLKWDPELAKAAQAHAKYCANSNSLSH---DSGENGSQSSRFGSYSDAQVTAVENWYSESKNYNF   77 (124)
T ss_dssp             HHHHHHHHHBSSTBB--EE-HHHHHHHHHHHTTTCSSEETTE---ESEEEEEEESSTTSHHHHHHHHHHHHHGGGGGEET
T ss_pred             CHHHHHHHHHhCCCCCCeeCHHHHHHHHHhhHHhhhhccccc---ccCCCCccccccccccchhhHHHHHHHhccccccc
Confidence            78999999 889999999999999999999994433222222   467787655432211   11129999999999988


Q ss_pred             CC--CCCCCCCCChhHHHHHHHhcCccccC
Q 047831          125 KT--NSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       125 ~~--~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ..  ........++||+||+|.++++||||
T Consensus        78 ~~~~~~~~~~~~~~h~~~ll~~~~~~iGca  107 (124)
T PF00188_consen   78 QNQSIFNSWMNSPGHFTNLLWPNTTRIGCA  107 (124)
T ss_dssp             TCSTEESSTTSTCHHHHHHT-TT--EEEEE
T ss_pred             ccchhhhccCCchhhhhhhhcCCCCEEEEE
Confidence            72  22223467899999999999999997

Members are most often secreted and have an extracellular endocrine or paracrine function and are involved in processes including the regulation of extracellular matrix and branching morphogenesis, potentially as either proteases or protease inhibitors; in ion channel regulation in fertility; as tumour suppressor or pro-oncogenic genes in tissues including the prostate; and in cell-cell adhesion during fertilisation. The overall protein structural conservation within the CAP superfamily results in fundamentally similar functions for the CAP domain in all members, yet the diversity outside of this core region dramatically alters the target specificity and, thus, the biological consequences []. The Ca++-chelating function [] would fit with the various signalling processes (e.g. the CRISP proteins) that members of this family are involved in, and also the sequence and structural evidence of a conserved pocket containing two histidines and a glutamate. It also may explain how Q91055 from SWISSPROT blocks the Ca++ transporting ryanodine receptors. This entry represents the CAP domain common to all members of the CAP superfamily. The CAP domain forms a unique 3 layer alpha-beta-alpha fold with some, though not all, of the structural elements found in proteases [].; PDB: 3U3N_C 3U3U_C 3U3L_C 1U53_A 1RC9_A 1SMB_A 3NT8_B 1QNX_A 1WVR_A 3Q2U_A ....

>cd05379 SCP_bacterial SCP_bacterial: SCP-like extracellular protein domain, as found in bacteria and archaea

Probab=99.69  E-value=6.7e-17  Score=109.20  Aligned_cols=88  Identities=23%  Similarity=0.325  Sum_probs=77.9

Q ss_pred             hhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCC-----------------CccceeeeccCCCCCH
Q 047831           46 QQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS-----------------NHGESLFWGSGKNWKS  108 (152)
Q Consensus        46 ~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~-----------------~~GeNi~~~~~~~~~~  108 (152)
                      +.+++.+|.+|..+|++||+||++|...|+.||++|+....+.|.+.                 .+|||++.+..   ++
T Consensus         2 ~~~~~~iN~~R~~~gl~pl~~~~~l~~~A~~~a~~~~~~~~~~h~~~~~~~~~~~~~~~g~~~~~~~eni~~~~~---~~   78 (122)
T cd05379           2 QEALELINAYRAQNGLPPLTWDPALAAAAQAHARDMAANGYFSHTGPDGSSPFDRARAAGYPYSSAGENIAYGYS---TA   78 (122)
T ss_pred             hHHHHHHHHHHHHcCCCCCccChHHHHHHHHHHHHHHhcCccCCcCCCCCCHHHHHHHcCCCcCccchhhcccCC---CH
Confidence            46899999999999999999999999999999999998777888753                 13999987654   79


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          109 ADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       109 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      .++++.|+++                .+|+.+|+|.+.+++|||
T Consensus        79 ~~~~~~w~~~----------------~~H~~~ll~~~~~~~Gvg  106 (122)
T cd05379          79 EAAVDGWMNS----------------PGHRANILNPDYTEVGVG  106 (122)
T ss_pred             HHHHHHHhCC----------------HhHHHHHcCCCcceeeEE
Confidence            9999999976                379999999999999997

The wider family of SCP containing proteins includes plant pathogenesis-related protein 1 (PR-1), CRISPs, mammalian cysteine-rich secretory proteins, and allergen 5 from vespid venom. It has been proposed that SCP domains may function as endopeptidases. Little is known about the biological roles of the bacterial and archaeal SCP domains.

>COG2340 Uncharacterized protein with SCP/PR1 domains [Function unknown]

Probab=99.51  E-value=4e-14  Score=105.00  Aligned_cols=78  Identities=26%  Similarity=0.427  Sum_probs=69.6

Q ss_pred             ChhHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCC-----------------CccceeeeccC
Q 047831           41 QRNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS-----------------NHGESLFWGSG  103 (152)
Q Consensus        41 ~~~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~-----------------~~GeNi~~~~~  103 (152)
                      .+++..++++.+|++|..++++||+||.+|+..|+.|+++|+.+..++|..+                 .+||||++++.
T Consensus        77 ~~~~~~~~~~~~N~~R~~~~l~~L~~n~~L~~~A~~~a~~m~~~g~~sH~~~~g~~~~~r~~~~g~~~~~agENIa~g~~  156 (207)
T COG2340          77 LAQFEKAVVAETNQERAKHGLPPLAWNATLAKAARNHARDMAKNGYFSHTSPTGETPADRLKKYGISGATAGENIAYGSN  156 (207)
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCcccCHHHHHHHHHHHHHHHHcCCccccCCCCCCHHHHHHhCCcccccccceeecCCC
Confidence            4678889999999999999999999999999999999999999999999863                 48999998864


Q ss_pred             CCCCH-HHHHHHHHhcccc
Q 047831          104 KNWKS-ADAVAAWAAEQGY  121 (152)
Q Consensus       104 ~~~~~-~~~v~~W~~e~~~  121 (152)
                         +. +.+|+.|++...+
T Consensus       157 ---~~~~~~v~~Wl~S~gH  172 (207)
T COG2340         157 ---DPPEAAVDGWLNSPGH  172 (207)
T ss_pred             ---CchHHHHHHhcCChhh
Confidence               44 8999999988744

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=87.78  E-value=0.48  Score=30.82  Aligned_cols=19  Identities=32%  Similarity=0.383  Sum_probs=9.1

Q ss_pred             ChHHHHHHHHHHHHHHHHH
Q 047831            1 MEIRALFSCALLGIFLLFL   19 (152)
Q Consensus         1 m~~r~~~~~~~~~~~~l~~   19 (152)
                      |.-|.+|+..+++.++||+
T Consensus         1 MaSK~~llL~l~LA~lLli   19 (95)
T PF07172_consen    1 MASKAFLLLGLLLAALLLI   19 (95)
T ss_pred             CchhHHHHHHHHHHHHHHH
Confidence            6666655444433333333

Some of them may be involved in resistance to environmental stress [].

>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls

Probab=82.40  E-value=1.2  Score=30.45  Aligned_cols=21  Identities=19%  Similarity=0.294  Sum_probs=14.6

Q ss_pred             HHhHHHHhCCCCCCcccHHHH
Q 047831           51 TRKIVKAKLGLPPLQWRKKLA   71 (152)
Q Consensus        51 ~hN~~R~~~~~~~L~wd~~La   71 (152)
                      .||+.|++.|+.|+.-..-+.
T Consensus        21 ~~~rRR~r~G~~P~~gt~w~~   41 (130)
T PF12273_consen   21 CHNRRRRRRGLQPIYGTRWMA   41 (130)
T ss_pred             HHHHHHhhcCCCCcCCceecC
Confidence            468888888988886544333

Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	152
1cfe_A	135	P14a, Nmr, 20 Structures Length = 135		5e-13

>pdb|1CFE|A Chain A, P14a, Nmr, 20 Structures Length = 135

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 42  RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWG 101
           +N+ Q Y       +A++G+ P+ W   LA+ A  + N +  DC+L+HS +  GE+L  G
Sbjct: 1   QNSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKG 58
Query: 102 SGKNWKSXXXXXXXXXEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
            G ++           E+  YN+ TN C   K C  YTQ+VWR S+++GC
Sbjct: 59  GG-DFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGC 107

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	152
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	1e-28
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	8e-28
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	3e-22
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	3e-21
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	3e-20
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	1e-19
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	2e-19
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	6e-17
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	1e-16
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	3e-16
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	5e-11
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	4e-07

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1 Length = 135

 Score =  101 bits (254), Expect = 1e-28
 Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 57  AKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWA 116
           A++G+ P+ W   LA+ A  + N +  DC+L+HS    GE+L  G G ++    AV  W 
Sbjct: 16  AQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSG--AGENLAKGGG-DFTGRAAVQLWV 72

Query: 117 AEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           +E+  YN+ TN C   K C  YTQ+VWR S+++GC
Sbjct: 73  SERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGC 107

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A* Length = 154

 Score =  100 bits (250), Expect = 8e-28
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 57  AKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNH----GESLFWGSGKNWKSADAV 112
            K G+PPL+  K L   A  +         L HS  +     GE+L W S  +    +  
Sbjct: 22  QKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASY-DQTGKEVA 80

Query: 113 AAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             W +E   YN +    +       +T MVW+ + K+G 
Sbjct: 81  DRWYSEIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGV 117

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A Length = 205

 Score = 86.9 bits (215), Expect = 3e-22
 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 10/108 (9%)

Query: 52  RKIVKAKLGLPPLQWRKKLANFASWWVNQ--------QRRDCDLVHSNSNHGESLFWGSG 103
            ++      +  + W   LA  A  W +          +    L  + ++ GE+++ GS 
Sbjct: 31  SEVKPTASDMLYMTWDPALAQIAKAWASNCQFSHNTRLKPPHKLHPNFTSLGENIWTGSV 90

Query: 104 KNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             +  + A+  W  E   Y+ KT  C   K C  YTQ+VW  S KVGC
Sbjct: 91  PIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGC 136

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A Length = 210

 Score = 84.2 bits (208), Expect = 3e-21
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 52  RKIVKAKL-GLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS--------NHGESLFWGS 102
           R+ VK     +  ++W    A  A  W ++    C   HS            GE++F  S
Sbjct: 17  RRSVKPTARNMLQMKWNSHAAQNAKRWADR----CTFAHSPPNTRTVGKLRCGENIFMSS 72

Query: 103 GKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
              +  +  V AW  E   + +   +         YTQ+VW +S  +GC
Sbjct: 73  Q-PFPWSGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGC 120

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A Length = 221

 Score = 81.9 bits (202), Expect = 3e-20
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 13/98 (13%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSNS--------NHGESLFWGSGKNWKSADAVA 113
             ++W  + A+ A  W N     C L HS            GES++  S     + + + 
Sbjct: 37  LKMEWYPEAASNAERWANT----CSLNHSPDNLRVLEGIQCGESIYMSSNARTWT-EIIH 91

Query: 114 AWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
            W  E   + +   +         YTQ+VW Q+ + GC
Sbjct: 92  LWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGC 129

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus} Length = 196

 Score = 79.9 bits (197), Expect = 1e-19
 Identities = 21/98 (21%), Positives = 34/98 (34%), Gaps = 8/98 (8%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSA----DAVAAWAA 117
             + +  ++   A     Q        +     GE++F  S      A     A  AW  
Sbjct: 51  KTMAYDCEVEKTAMNNAKQCVFKHSQPNQRKGLGENIFMSSDSGMDKAKAAEQASKAWFG 110

Query: 118 EQGYYNHKTNSC----SRYKDCLRYTQMVWRQSLKVGC 151
           E        N         +    YTQMVW++++K+GC
Sbjct: 111 ELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGC 148

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1 Length = 209

 Score = 79.5 bits (196), Expect = 2e-19
 Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSNSNH--GESLFWGSGKNWKS---ADAVAAWA 116
             L W  +LA  A  W NQ +   D     + +  G+++        K       V  W 
Sbjct: 80  KNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMWE 139

Query: 117 AEQGYYNHKTNSCSRY-KDCLRYTQMVWRQSLKVGC 151
            E   YN K             YTQMVW  + +VGC
Sbjct: 140 DEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGC 175

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta} Length = 218

 Score = 73.4 bits (180), Expect = 6e-17
 Identities = 25/104 (24%), Positives = 40/104 (38%), Gaps = 18/104 (17%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSNSNH------GESLFWGSGKNWKS---ADAV 112
           P L W  +LA  A  W NQ    C   H    +      G+++   S          + +
Sbjct: 77  PNLTWDPELATIAQRWANQ----CTFEHDACRNVERFAVGQNIAATSSSGKNKSTPNEMI 132

Query: 113 AAWAAEQGYYNHKTNSCSRYKD-----CLRYTQMVWRQSLKVGC 151
             W  E   ++++  S     D        YTQ+VW ++ K+GC
Sbjct: 133 LLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGC 176

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 74.8 bits (183), Expect = 1e-16
 Identities = 10/97 (10%), Positives = 26/97 (26%), Gaps = 11/97 (11%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSN-SNHGESLFWGSGKNWKS------ADAVAA 114
             L W   +       +      C    +      ++    S               ++ 
Sbjct: 70  YKLSWDCAMEQQLQDAIQS----CPSGFAGIQGVAQNTMSWSSSGGYPDPSVKIEPTLSG 125

Query: 115 WAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           W +         ++         ++ MV+ ++ K+GC
Sbjct: 126 WWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGC 162

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus} Length = 424

 Score = 73.6 bits (180), Expect = 3e-16
 Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 19/105 (18%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSNS----NHGESLFWGSGKNWKS----ADAVA 113
             + +  ++   A    N+    C   HS+       GE+++  S   +        A  
Sbjct: 272 LKMVYDCEVEASAIRHGNK----CVYQHSHGEDRPGLGENIYKTSVLKFDKNKAAKQASQ 327

Query: 114 AWAAEQGYYNHKTNSCSRY-------KDCLRYTQMVWRQSLKVGC 151
            W  E   Y    ++                YTQM W  + K+GC
Sbjct: 328 LWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGC 372

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C* Length = 233

 Score = 57.8 bits (139), Expect = 5e-11
 Identities = 16/103 (15%), Positives = 25/103 (24%), Gaps = 12/103 (11%)

Query: 61  LPPLQWRKKLANFASWWVNQ---QRRDCDLVHSNSNHGESLFWGSGKNWKSA-----DAV 112
           +  + W  +LA  A         +   C         G+  F  SG           DAV
Sbjct: 68  MKVVVWDAELAGLAKRHTKGCVGETHACRNTERFWLPGQLNFKYSGDKLPRIKELIDDAV 127

Query: 113 AAWAAEQGYYN----HKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
                ++                  D       +  +   VGC
Sbjct: 128 KKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGC 170

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A Length = 206

 Score = 46.6 bits (110), Expect = 4e-07
 Identities = 11/90 (12%), Positives = 22/90 (24%), Gaps = 18/90 (20%)

Query: 62  PPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGY 121
             L +   L   A   +              + G + F G  +    +            
Sbjct: 48  YGLVYDCGLEEEARKEIKL----PGYAD-LHHRGVTRFSGDYEGSAISALKEILETFSAD 102

Query: 122 YNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
            N                Q+V+ ++ + GC
Sbjct: 103 KNS-------------MRQVVYPKATRFGC 119

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	152
1cfe_A	135	Pathogenesis-related protein P14A; PR-1 proteins,	100.0
4aiw_A	154	Golgi-associated plant pathogenesis-related prote;	100.0
3q2u_A	205	Glioma pathogenesis-related protein 1; crisp, memb	99.97
1xta_A	221	Natrin 1; crisp, serine protease, ION channel bloc	99.97
2ddb_A	210	Pseudecin, channel blocker; crisp, snake venom, CN	99.97
1u53_A	196	Secreted protein Asp-2; antibiotic; 1.56A {Necator	99.97
1qnx_A	209	VES V 5, antigen 5; allergen, vespid venom; 1.90A	99.96
2vzn_A	218	Venom allergen 3; major FIRE ANT allergen, SOL I 3	99.96
3u3l_C	233	Tablysin 15; CAP domain, alphavbeta3 integrin, sal	99.96
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	99.95
3nt8_A	424	Ancylostoma secreted protein 1; pathogenesis relat	99.94
3s6s_A	206	AC-Asp-7; pathogenesis-related protein, SCP/TAPS,	99.89
4ifa_A	339	Extracellular protein containing A SCP domain; vac	99.79
4h0a_A	323	Uncharacterized protein; CAP protein family, cyste	99.63
3plv_C	21	66 kDa U4/U6.U5 small nuclear ribonucleoprotein C;	85.73

>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1

Probab=100.00  E-value=1.5e-37  Score=215.36  Aligned_cols=107  Identities=37%  Similarity=0.724  Sum_probs=100.4

Q ss_pred             hHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCCCccceeeeccCCCCCHHHHHHHHHhccccC
Q 047831           43 NTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYY  122 (152)
Q Consensus        43 ~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y  122 (152)
                      +.+++||+.||.+|+.++++||+||++|+..||.||++|+++|.+.|+++  ||||++++ ...++.++|+.||+|..+|
T Consensus         2 ~~~~~iL~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~--GENla~~~-~~~~~~~~v~~W~~E~~~y   78 (135)
T 1cfe_A            2 NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGG-GDFTGRAAVQLWVSERPSY   78 (135)
T ss_dssp             CSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSCSS--SBCCEECS-SSCCHHHHHHHHHTTGGGE
T ss_pred             cHHHHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHHHhcCCCcccCCC--CeEEEEec-CCCCHHHHHHHHHhHHhhC
Confidence            35889999999999999999999999999999999999999999999985  99999886 3468999999999999999


Q ss_pred             CCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          123 NHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       123 ~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      +|..+.|..++.+||||||||++|++||||
T Consensus        79 ~~~~~~~~~~~~~gHfTQ~vW~~t~~vGCa  108 (135)
T 1cfe_A           79 NYATNQCVGGKKCRHYTQVVWRNSVRLGCG  108 (135)
T ss_dssp             EGGGTEECSSSCCSSHHHHHCTTCCEEEEE
T ss_pred             CCCCCCcCCCCcccceeeeEEccCcEEeEE
Confidence            999999987788999999999999999997

>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*

Probab=100.00  E-value=3.6e-37  Score=217.77  Aligned_cols=108  Identities=24%  Similarity=0.375  Sum_probs=99.6

Q ss_pred             hhHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCC----CCccceeeeccCCCCCHHHHHHHHHh
Q 047831           42 RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSN----SNHGESLFWGSGKNWKSADAVAAWAA  117 (152)
Q Consensus        42 ~~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~----~~~GeNi~~~~~~~~~~~~~v~~W~~  117 (152)
                      .+++++||+.||.+|+.||+|||+||++|+..||.||+++++.|.+.|++    +.+||||+++.. ..++.++|+.||+
T Consensus         7 ~~f~~~iL~~HN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~-~~~~~~~v~~W~~   85 (154)
T 4aiw_A            7 KQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASY-DQTGKEVADRWYS   85 (154)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESS-CCCHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCC-CCCHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999984    378999998754 3478999999999


Q ss_pred             ccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          118 EQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       118 e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      |..+|+|..+.|.  ..|||||||||++|++||||
T Consensus        86 E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCg  118 (154)
T 4aiw_A           86 EIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVG  118 (154)
T ss_dssp             GGGGCCTTSCSCC--TTTHHHHHHHCTTCCEEEEE
T ss_pred             HhhhcccCCCCcC--CCcCCeeeeehhhhceeeeE
Confidence            9999999999887  46999999999999999997

>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A

Probab=99.97  E-value=9.6e-32  Score=197.78  Aligned_cols=108  Identities=29%  Similarity=0.593  Sum_probs=96.7

Q ss_pred             CCChhHHhhHHHHHhHHHHhCC-----CCCCcccHHHHHHHHHHHHHhccCCCccCCC------------CCccceeeec
Q 047831           39 SPQRNTIQQYPVTRKIVKAKLG-----LPPLQWRKKLANFASWWVNQQRRDCDLVHSN------------SNHGESLFWG  101 (152)
Q Consensus        39 ~~~~~~~~~il~~hN~~R~~~~-----~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~------------~~~GeNi~~~  101 (152)
                      ....+++++||+.||.+|+.++     |++|+||++|+..||.||+    +|.+.|++            ..+||||+.+
T Consensus        13 ~~~~~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~   88 (205)
T 3q2u_A           13 IENEDFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWAS----NCQFSHNTRLKPPHKLHPNFTSLGENIWTG   88 (205)
T ss_dssp             TTCHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TCBSSCCTTSSTTCCSSTTCSSCEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHH----hCCCCCCccccccccccCCCCCCceEEEEc
Confidence            3457899999999999999996     6689999999999999999    89988875            2589999987


Q ss_pred             cCCCCCHHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          102 SGKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       102 ~~~~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      +....++.++|+.||+|..+|+|.++.|.  ..+||||||||++|++||||
T Consensus        89 ~~~~~~~~~~v~~W~~E~~~y~~~~~~~~--~~~gHfTQ~VW~~t~~vGCa  137 (205)
T 3q2u_A           89 SVPIFSVSSAITNWYDEIQDYDFKTRICK--KVCGHYTQVVWADSYKVGCA  137 (205)
T ss_dssp             ETTTCCHHHHHHHHHGGGGGEETTTTEES--SCCHHHHHHTCTTCCEEEEE
T ss_pred             cCCCCCHHHHHHHHHhHHHhcCCCCCCcc--chhHHHHHHHhhcccEeeeE
Confidence            65556899999999999999999988775  68999999999999999996

>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A

Probab=99.97  E-value=2.2e-31  Score=198.08  Aligned_cols=110  Identities=21%  Similarity=0.436  Sum_probs=97.5

Q ss_pred             CCCChhHHhhHHHHHhHHHHhCC-----CCCCcccHHHHHHHHHHHHHhccCCCccCCCC--------CccceeeeccCC
Q 047831           38 GSPQRNTIQQYPVTRKIVKAKLG-----LPPLQWRKKLANFASWWVNQQRRDCDLVHSNS--------NHGESLFWGSGK  104 (152)
Q Consensus        38 ~~~~~~~~~~il~~hN~~R~~~~-----~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~--------~~GeNi~~~~~~  104 (152)
                      .+...+++++||+.||.+|+.++     |++|+||++|+..||.||+    +|.+.|++.        .+||||++++..
T Consensus         8 ~~~~~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~   83 (221)
T 1xta_A            8 STRRKKKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWAN----TCSLNHSPDNLRVLEGIQCGESIYMSSNA   83 (221)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGCEETTEECEEEEEEESSC
T ss_pred             cCCCHHHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHh----cCCCCCcCccccccCCCCCceEEEeecCC
Confidence            34557889999999999999996     5599999999999999999    899999863        489999987642


Q ss_pred             CCCHHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          105 NWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       105 ~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                       .+..++|+.||+|..+|+|..+.+..+..+||||||||++|++||||
T Consensus        84 -~~~~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa  130 (221)
T 1xta_A           84 -RTWTEIIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCA  130 (221)
T ss_dssp             -CCHHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEE
T ss_pred             -CCHHHHHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEE
Confidence             36899999999999999999877766788999999999999999997

>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A

Probab=99.97  E-value=2.9e-31  Score=196.04  Aligned_cols=106  Identities=23%  Similarity=0.428  Sum_probs=94.3

Q ss_pred             hhHHhhHHHHHhHHHHhCC-----CCCCcccHHHHHHHHHHHHHhccCCCccCCCC--------CccceeeeccCCCCCH
Q 047831           42 RNTIQQYPVTRKIVKAKLG-----LPPLQWRKKLANFASWWVNQQRRDCDLVHSNS--------NHGESLFWGSGKNWKS  108 (152)
Q Consensus        42 ~~~~~~il~~hN~~R~~~~-----~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~--------~~GeNi~~~~~~~~~~  108 (152)
                      .+++++||+.||.+|+.++     |++|+||++|+..||.||+    +|.+.|++.        .+||||++++.. .+.
T Consensus         3 ~~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~-~~~   77 (210)
T 2ddb_A            3 KNYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWAD----RCTFAHSPPNTRTVGKLRCGENIFMSSQP-FPW   77 (210)
T ss_dssp             -CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGSEETTEECEEEEEEESSC-CCH
T ss_pred             HHHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHh----cCCCCCCCccccccCCCCCcceEEEEcCC-CCH
Confidence            3578999999999999996     5699999999999999999    899999863        489999987642 468


Q ss_pred             HHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          109 ADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       109 ~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      .++|+.||+|..+|+|+.+.+..+..+||||||||++|++||||
T Consensus        78 ~~av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa  121 (210)
T 2ddb_A           78 SGVVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCA  121 (210)
T ss_dssp             HHHHHHHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEE
T ss_pred             HHHHHHHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEE
Confidence            99999999999999999877776788999999999999999997

>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}

Probab=99.97  E-value=4.9e-31  Score=192.80  Aligned_cols=111  Identities=20%  Similarity=0.356  Sum_probs=94.4

Q ss_pred             CCCChhHHhhHHHHHhHHHHhC-----------------CCCCCcccHHHHHHHHHHHHHhccCCCccCCC----CCccc
Q 047831           38 GSPQRNTIQQYPVTRKIVKAKL-----------------GLPPLQWRKKLANFASWWVNQQRRDCDLVHSN----SNHGE   96 (152)
Q Consensus        38 ~~~~~~~~~~il~~hN~~R~~~-----------------~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~----~~~Ge   96 (152)
                      .....++++.||+.||.+|+.+                 +|++|+||++|+..||.||+    +|.+.|+.    ..+||
T Consensus        10 ~~lt~~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~Ge   85 (196)
T 1u53_A           10 NGMSEEARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMKTMAYDCEVEKTAMNNAK----QCVFKHSQPNQRKGLGE   85 (196)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCCCCCCGGGSTTCEE
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccchhcccCHHHHHHHHHHHH----hCccCCCccccCCCCCe
Confidence            3455678999999999999998                 25599999999999999999    89999984    26899


Q ss_pred             eeeeccCCCC----CHHHHHHHHHhccccCCCCC-CCCC---CCCCChhHHHHHHHhcCccccC
Q 047831           97 SLFWGSGKNW----KSADAVAAWAAEQGYYNHKT-NSCS---RYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus        97 Ni~~~~~~~~----~~~~~v~~W~~e~~~y~~~~-~~~~---~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ||++.++...    .+.++|+.||+|..+|+|.. +.|.   .+..+||||||||++|++||||
T Consensus        86 Nl~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa  149 (196)
T 1u53_A           86 NIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCY  149 (196)
T ss_dssp             EEEEESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEE
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeE
Confidence            9998764322    25899999999999999987 6665   3567999999999999999997

>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1

Probab=99.96  E-value=9.6e-31  Score=193.06  Aligned_cols=111  Identities=25%  Similarity=0.433  Sum_probs=93.1

Q ss_pred             CCCChhHHhhHHHHHhHHHHhC--C---------------CCCCcccHHHHHHHHHHHHHhccCCCccCCC------CCc
Q 047831           38 GSPQRNTIQQYPVTRKIVKAKL--G---------------LPPLQWRKKLANFASWWVNQQRRDCDLVHSN------SNH   94 (152)
Q Consensus        38 ~~~~~~~~~~il~~hN~~R~~~--~---------------~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~------~~~   94 (152)
                      .....++++.||+.||.+|+.+  |               |++|+||++|+..||.||+    +|.+.|+.      ..+
T Consensus        39 ~~l~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~  114 (209)
T 1qnx_A           39 YGLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQV  114 (209)
T ss_dssp             ESCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCC
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhcCccccCCCCCCCccccccccccCHHHHHHHHHHHh----cCcccCCCccCCCCCCC
Confidence            3455678999999999999997  2               7899999999999999999    89999985      158


Q ss_pred             cceeeeccCC---CCCHHHHHHHHHhccccCCCCCCCCC-CCCCChhHHHHHHHhcCccccC
Q 047831           95 GESLFWGSGK---NWKSADAVAAWAAEQGYYNHKTNSCS-RYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus        95 GeNi~~~~~~---~~~~~~~v~~W~~e~~~y~~~~~~~~-~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ||||+++...   ..++.++|+.||+|..+|+|..+-+. .+..+||||||||++|++||||
T Consensus       115 GeNl~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa  176 (209)
T 1qnx_A          115 GQNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCG  176 (209)
T ss_dssp             EEEEEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEE
T ss_pred             ccEEEEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeE
Confidence            9999976532   23688999999999999999864221 1346899999999999999997

>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}

Probab=99.96  E-value=1.6e-30  Score=192.97  Aligned_cols=111  Identities=21%  Similarity=0.410  Sum_probs=92.3

Q ss_pred             CCCChhHHhhHHHHHhHHHHhCC-----------------CCCCcccHHHHHHHHHHHHHhccCCCccCCC------CCc
Q 047831           38 GSPQRNTIQQYPVTRKIVKAKLG-----------------LPPLQWRKKLANFASWWVNQQRRDCDLVHSN------SNH   94 (152)
Q Consensus        38 ~~~~~~~~~~il~~hN~~R~~~~-----------------~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~------~~~   94 (152)
                      .....++++.||+.||.+|+.++                 |++|+||++|+..||.||+    +|.+.|++      ..+
T Consensus        36 ~~~t~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~~L~Wd~~La~~Aq~~A~----~C~~~Hs~c~~~~~~~~  111 (218)
T 2vzn_A           36 VGFTDAEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMPNLTWDPELATIAQRWAN----QCTFEHDACRNVERFAV  111 (218)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCCCCEECHHHHHHHHHHHT----TCCSSCCSCCCCSSSCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhchhccCCHHHHHHHHHHHH----hCCcCCCCCCCCccCCC
Confidence            45567889999999999999972                 7899999999999999999    89999986      258


Q ss_pred             cceeeeccCC---CCCHHHHHHHHHhccccCCCCCC-C--CC--CCCCChhHHHHHHHhcCccccC
Q 047831           95 GESLFWGSGK---NWKSADAVAAWAAEQGYYNHKTN-S--CS--RYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus        95 GeNi~~~~~~---~~~~~~~v~~W~~e~~~y~~~~~-~--~~--~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ||||++....   ..+..++|+.||+|..+|+|... .  +.  .+..+||||||||++|++||||
T Consensus       112 GeNl~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa  177 (218)
T 2vzn_A          112 GQNIAATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCG  177 (218)
T ss_dssp             EEEEEEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEE
T ss_pred             ceEEEEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEE
Confidence            9999976532   13567999999999999999842 1  22  2356899999999999999997

>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*

Probab=99.96  E-value=2.5e-29  Score=188.26  Aligned_cols=111  Identities=15%  Similarity=0.138  Sum_probs=91.4

Q ss_pred             CCCChhHHhhHHHHHhHHHHhC-----------CCCCCcccHHHHHHHHHHHHHhccCCCccCCC----C---Cccceee
Q 047831           38 GSPQRNTIQQYPVTRKIVKAKL-----------GLPPLQWRKKLANFASWWVNQQRRDCDLVHSN----S---NHGESLF   99 (152)
Q Consensus        38 ~~~~~~~~~~il~~hN~~R~~~-----------~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~----~---~~GeNi~   99 (152)
                      .....++++.||+.||.+|+.+           +|++|+||++||..||.||+    +|.+.|++    .   .+|||++
T Consensus        34 ~~~s~~~~~~il~~HN~~R~~va~G~~~~P~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~c~~~~~~~~~Gen~~  109 (233)
T 3u3l_C           34 RELLKEHRNEILSKINDVRDHVAKGSWGLPVAARMKVVVWDAELAGLAKRHTK----GCVGETHACRNTERFWLPGQLNF  109 (233)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHHHTTCTTCCCBSSCBCCEECHHHHHHHHHHHT----TCCSCCCCBCCCSSCSSCEEEEE
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHHcCCCCCCccccCCccEECHHHHHHHHHHHH----hCCCCCCcccccCcCCcCeEEEE
Confidence            3455789999999999999999           58999999999999999999    89999986    1   5899987


Q ss_pred             eccCCC-CC----HHHHHHHHHhccccCCCCC----CCCCCCCCChhHHHHHHHhcCccccC
Q 047831          100 WGSGKN-WK----SADAVAAWAAEQGYYNHKT----NSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       100 ~~~~~~-~~----~~~~v~~W~~e~~~y~~~~----~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ..++.. .+    +.++|+.||+|.++|++..    +.+..+..+||||||||++|++||||
T Consensus       110 ~~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa  171 (233)
T 3u3l_C          110 KYSGDKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCG  171 (233)
T ss_dssp             EEEESSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEE
T ss_pred             EecCCCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeE
Confidence            654422 12    5789999999999999753    22333578999999999999999997

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=99.95  E-value=1.3e-28  Score=198.23  Aligned_cols=110  Identities=12%  Similarity=0.179  Sum_probs=93.1

Q ss_pred             CCChhHHhhHHHHHhHHHHhC--C--------------CCCCcccHHHHHHHHHHHHHhccCCCccCCCC-Cccceeeec
Q 047831           39 SPQRNTIQQYPVTRKIVKAKL--G--------------LPPLQWRKKLANFASWWVNQQRRDCDLVHSNS-NHGESLFWG  101 (152)
Q Consensus        39 ~~~~~~~~~il~~hN~~R~~~--~--------------~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~-~~GeNi~~~  101 (152)
                      ....++++.||+.||.+|+.+  |              |++|+||++|+..||.||+    +|.+.|+.. .+|||++..
T Consensus        31 ~~~~~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~~L~Wd~eLa~~Aq~~a~----~C~~~h~~~~~~GeNl~~~  106 (424)
T 3nt8_A           31 GITDSDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMYKLSWDCAMEQQLQDAIQ----SCPSGFAGIQGVAQNTMSW  106 (424)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCBCCEECHHHHHHHHHHCT----TCCSSCCCCTTCEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCCccccCHHHHHHHHHHHh----hCCCcCCCCCCceeeEEec
Confidence            456778999999999999999  3              7789999999999999999    999999875 699999876


Q ss_pred             cC--CC----CCHHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          102 SG--KN----WKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       102 ~~--~~----~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      +.  ..    ..+.++|+.||+|.++|++.....-.+..+||||||||++|++||||
T Consensus       107 ~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa  163 (424)
T 3nt8_A          107 SSSGGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCA  163 (424)
T ss_dssp             ECTTCCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEE
T ss_pred             cccCCcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceE
Confidence            42  11    13688999999999999998544333567899999999999999997

>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}

Probab=99.94  E-value=2.9e-27  Score=190.43  Aligned_cols=110  Identities=18%  Similarity=0.299  Sum_probs=93.4

Q ss_pred             CCChhHHhhHHHHHhHHHHhCC-----------------CCCCcccHHHHHHHHHHHHHhccCCCccCCCC----Cccce
Q 047831           39 SPQRNTIQQYPVTRKIVKAKLG-----------------LPPLQWRKKLANFASWWVNQQRRDCDLVHSNS----NHGES   97 (152)
Q Consensus        39 ~~~~~~~~~il~~hN~~R~~~~-----------------~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~----~~GeN   97 (152)
                      ....++++.||+.||.+|+.++                 |++|+||++|+..||.||+    +|.+.|++.    .+|||
T Consensus       232 ~~~~~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~~~~~~~~GeN  307 (424)
T 3nt8_A          232 GMTDSVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGN----KCVYQHSHGEDRPGLGEN  307 (424)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCSSCCCTTTSTTCEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHH----hCcccCCCccccCcccee
Confidence            4456899999999999999984                 3389999999999999999    999999864    69999


Q ss_pred             eeeccCCCC----CHHHHHHHHHhccccCCCCCCC-C------CCCCCChhHHHHHHHhcCccccC
Q 047831           98 LFWGSGKNW----KSADAVAAWAAEQGYYNHKTNS-C------SRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus        98 i~~~~~~~~----~~~~~v~~W~~e~~~y~~~~~~-~------~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      |++.+....    .+.++|+.||+|.++|+|.... +      ..+..+||||||||++|++||||
T Consensus       308 l~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa  373 (424)
T 3nt8_A          308 IYKTSVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCA  373 (424)
T ss_dssp             EEEESSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEE
T ss_pred             EEecccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeE
Confidence            998754332    4789999999999999987543 2      23568999999999999999997

>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A

Probab=99.89  E-value=3.9e-24  Score=156.92  Aligned_cols=92  Identities=13%  Similarity=0.083  Sum_probs=73.1

Q ss_pred             CCChhHHhhHHHHHhHHHHhC------------CCCCCcccHHHHHHHHHHHHHhccCCCccCCCCCccceeeeccCCC-
Q 047831           39 SPQRNTIQQYPVTRKIVKAKL------------GLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKN-  105 (152)
Q Consensus        39 ~~~~~~~~~il~~hN~~R~~~------------~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~~~GeNi~~~~~~~-  105 (152)
                      ....++++.||+.||.+|+.+            +|++|+||++|+..||.||+     |. .+.. ..||||+..++.. 
T Consensus        13 ~lt~~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-----C~-~~~~-~~GeNl~~~sg~~~   85 (206)
T 3s6s_A           13 MVDRPFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-----LP-GYAD-LHHRGVTRFSGDYE   85 (206)
T ss_dssp             CSCHHHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-----ST-THHH-HTTCEEEEEEEECS
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-----CC-CCCC-CCCcEEEEecCCCC
Confidence            445678999999999999986            25679999999999999997     65 3322 2399996543321 


Q ss_pred             -CC--HHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          106 -WK--SADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       106 -~~--~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                       ..  ..++|+.||+|               .+||||||||++|++||||
T Consensus        86 ~~~~~~~~av~~W~~E---------------~~gHfTQmVW~~Tt~VGCa  120 (206)
T 3s6s_A           86 GSAISALKEILETFSA---------------DKNSMRQVVYPKATRFGCS  120 (206)
T ss_dssp             SCHHHHHHHHHHHHTT---------------CHHHHHHHHCTTCCEEEEE
T ss_pred             ccchhHHHHHHHHHhh---------------hhhhHHHHHHHhhceeeEE
Confidence             12  34899999999               4799999999999999997

>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}

Probab=99.79  E-value=1.2e-19  Score=141.87  Aligned_cols=92  Identities=17%  Similarity=0.263  Sum_probs=83.4

Q ss_pred             hhHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCC-----------------CccceeeeccCC
Q 047831           42 RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS-----------------NHGESLFWGSGK  104 (152)
Q Consensus        42 ~~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~-----------------~~GeNi~~~~~~  104 (152)
                      ..+.+++|++||.+|+.+|++||+||+.|++.||.||++|+.+|.++|++.                 .+||||++++. 
T Consensus       218 ~a~e~~vl~lvN~~Ra~~Gl~pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~~-  296 (339)
T 4ifa_A          218 NGNMQQIFDLTNIIRSRHNLPLLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHS-  296 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESCS-
T ss_pred             HHHHHHHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeCC-
Confidence            356789999999999999999999999999999999999999999999852                 36999999875 


Q ss_pred             CCCHHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          105 NWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       105 ~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                        ++..+|+.|++..                ||+.+|+|.+.+.||||
T Consensus       297 --s~~~av~~WmnSp----------------GHr~NIL~~~~t~iGvG  326 (339)
T 4ifa_A          297 --DGVAALQGWLNSE----------------GHRKNLLNEQFTGLGVG  326 (339)
T ss_dssp             --SHHHHHHHHHTSH----------------HHHHHHTCTTCCEEEEE
T ss_pred             --CHHHHHHHHhCCH----------------hHHHHHhCCCCCEEEEE
Confidence              8999999999633                89999999999999996

>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}

Probab=99.63  E-value=4.3e-16  Score=121.40  Aligned_cols=91  Identities=12%  Similarity=0.157  Sum_probs=75.3

Q ss_pred             hHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCC----------------CccceeeeccCCCC
Q 047831           43 NTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS----------------NHGESLFWGSGKNW  106 (152)
Q Consensus        43 ~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~----------------~~GeNi~~~~~~~~  106 (152)
                      ...+++|+++|.+|..+|++||+||+.|+..|+.||.+|++.....|++.                .+||||+.++.   
T Consensus       204 ~~e~~il~liN~~R~~~GL~pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~~---  280 (323)
T 4h0a_A          204 NQLISLYEVTNEMRKLKGLKPLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFN---  280 (323)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESCC---
T ss_pred             HHHHHHHHHHHHHHHHcCCcccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCCC---
Confidence            45678999999999999999999999999999999999987654444431                46999999875   


Q ss_pred             CHHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          107 KSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       107 ~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ++..+|+.|++..                ||..+|+..+.+.||+|
T Consensus       281 ~~~~vv~~WmnSp----------------gHR~NiL~~~~t~iGvG  310 (323)
T 4h0a_A          281 DVPTLIHSWMNSD----------------IHRSRLLNSKYDEMGGD  310 (323)
T ss_dssp             SHHHHHHHHHTSH----------------HHHHHHTCSSCCEEEEE
T ss_pred             CHHHHHHHHHcCH----------------HHHHHHcCCCCCEEEEE
Confidence            8999999999754                79999999999999986

>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}

Probab=85.73  E-value=0.71  Score=20.78  Aligned_cols=17  Identities=24%  Similarity=0.288  Sum_probs=14.3

Q ss_pred             HHHHhHHHHhCCCCCCc
Q 047831           49 PVTRKIVKAKLGLPPLQ   65 (152)
Q Consensus        49 l~~hN~~R~~~~~~~L~   65 (152)
                      ++..|..|.+.||.|+.
T Consensus         4 iEEtnk~r~~lGLkplp   20 (21)
T 3plv_C            4 IEETNELRASLGLKLIP   20 (26)
T ss_dssp             HHHHHHHHHHTTCCCCC
T ss_pred             HHHHHHHHHHcCCCCCC
Confidence            46789999999999873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	152
d1cfea_	135	d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1	3e-14
d1rc9a1	164	d.111.1.1 (A:1-164) Cysteine-rich secretory protei	1e-13
d1qnxa_	209	d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jac	1e-11
d1smba_	149	d.111.1.1 (A:) Golgi-associated PR-1 protein {Huma	2e-10

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]} Length = 135

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

 Score = 63.3 bits (153), Expect = 3e-14
 Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 3/109 (2%)

Query: 43  NTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGS 102
           N+ Q Y       +A++G+ P+ W   LA+ A  + N +  DC+L+HS +          
Sbjct: 2   NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHSGAGEN---LAKG 58

Query: 103 GKNWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
           G ++    AV  W +E+  YN+ TN C   K C  YTQ+VWR S+++GC
Sbjct: 59  GGDFTGRAAVQLWVSERPSYNYATNQCVGGKKCRHYTQVVWRNSVRLGC 107

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]} Length = 164

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

 Score = 62.6 bits (151), Expect = 1e-13
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 5/104 (4%)

Query: 52  RKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSN----SNHGESLFWGSGKNWK 107
           R +      +  ++W  + A+ A  W  +         S        GE+++       K
Sbjct: 27  RSVNPTASNMLRMEWYPEAADNAERWAYRCIESHSSYESRVIEGIKCGENIYMSPY-PMK 85

Query: 108 SADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             D + AW  E   + +   +         YTQ+VW +S ++GC
Sbjct: 86  WTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGC 129

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]} Length = 209

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

 Score = 57.6 bits (138), Expect = 1e-11
 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 6/97 (6%)

Query: 61  LPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHG----ESLFWGSGKNWKSA-DAVAAW 115
           +  L W  +LA  A  W NQ +   D     + +      +L   +   +      V  W
Sbjct: 79  MKNLVWNDELAYVAQVWANQCQYGHDTCRDVAKYQVGQNVALTGSTAAKYDDPVKLVKMW 138

Query: 116 AAEQGYYNHKTNS-CSRYKDCLRYTQMVWRQSLKVGC 151
             E   YN K     + +     YTQMVW  + +VGC
Sbjct: 139 EDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGC 175

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 2e-10
 Identities = 25/99 (25%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 57  AKLGLPPLQWRKKLANFASWWVNQQRRDCDLV----HSNSNHGESLFWGSGKNWKSADAV 112
            K G+PPL+  K L   A  +         L      S    GE+L W S  +    +  
Sbjct: 19  QKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASY-DQTGKEVA 77

Query: 113 AAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGC 151
             W +E   YN +            +T MVW+ + K+G 
Sbjct: 78  DRWYSEIKNYNFQQPGF--TSGTGHFTAMVWKNTKKMGV 114

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	152
d1cfea_	135	Pathogenesis-related protein 1 (PR1) {Tomato (Lyco	100.0
d1smba_	149	Golgi-associated PR-1 protein {Human (Homo sapiens	100.0
d1rc9a1	164	Cysteine-rich secretory protein (SteCRISP) {Chines	99.96
d1qnxa_	209	Insect allergen 5 (AG5) {Yellow jacket (Vespula vu	99.94

>d1cfea_ d.111.1.1 (A:) Pathogenesis-related protein 1 (PR1) {Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Pathogenesis-related protein 1 (PR1)
species: Tomato (Lycopersicon esculentum), P14a [TaxId: 4081]

Probab=100.00  E-value=7.9e-36  Score=204.95  Aligned_cols=107  Identities=38%  Similarity=0.742  Sum_probs=98.2

Q ss_pred             hHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCCCccceeeeccCCCCCHHHHHHHHHhccccC
Q 047831           43 NTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNSNHGESLFWGSGKNWKSADAVAAWAAEQGYY  122 (152)
Q Consensus        43 ~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~~~GeNi~~~~~~~~~~~~~v~~W~~e~~~y  122 (152)
                      ++++++|+.||.+|+.++|+||+||++|++.||.||+.++..|.+.|+  .+||||+++.+ ..++.++|+.||+|..+|
T Consensus         2 ~~~q~~l~~HN~~R~~~~~~~L~Wd~~La~~Aq~~A~~~~~~~~~~~~--~~GeNi~~~~~-~~~~~~av~~W~~E~~~y   78 (135)
T d1cfea_           2 NSPQDYLAVHNDARAQVGVGPMSWDANLASRAQNYANSRAGDCNLIHS--GAGENLAKGGG-DFTGRAAVQLWVSERPSY   78 (135)
T ss_dssp             CSHHHHHHHHHHHHHHTTCCCCEECSHHHHHHHHHHHHHTTTCCSCSC--SSSBCCEECSS-SCCHHHHHHHHHTTGGGE
T ss_pred             CcHHHHHHHHHHHHHHcCCCcCEECHHHHHHHHHHHHHHhhCCCcccC--ccccceeccCC-CCCHHHHHHHHHhhcccc
Confidence            457889999999999999999999999999999999999888888777  58999998653 468999999999999999


Q ss_pred             CCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          123 NHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       123 ~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      +|..+.+..+..+||||||||++|++||||
T Consensus        79 ~~~~~~~~~~~~~ghftQmvW~~t~~vGCa  108 (135)
T d1cfea_          79 NYATNQCVGGKKCRHYTQVVWRNSVRLGCG  108 (135)
T ss_dssp             EGGGTEECSSSCCSSHHHHHCTTCCEEEEE
T ss_pred             ccccccCCCCcccchhheeeehhheEeeEE
Confidence            999988887788999999999999999997

>d1smba_ d.111.1.1 (A:) Golgi-associated PR-1 protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Golgi-associated PR-1 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-34  Score=197.72  Aligned_cols=108  Identities=24%  Similarity=0.374  Sum_probs=98.9

Q ss_pred             hhHHhhHHHHHhHHHHhCCCCCCcccHHHHHHHHHHHHHhccCCCccCCCC----CccceeeeccCCCCCHHHHHHHHHh
Q 047831           42 RNTIQQYPVTRKIVKAKLGLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS----NHGESLFWGSGKNWKSADAVAAWAA  117 (152)
Q Consensus        42 ~~~~~~il~~hN~~R~~~~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~----~~GeNi~~~~~~~~~~~~~v~~W~~  117 (152)
                      ++++++||+.||.+|+.+|++||+||++|++.||.||++|+++|.+.|++.    .+|||++++.. ..++.++|+.|++
T Consensus         4 ~~f~~~il~~HN~~R~~~g~~pL~wd~~La~~A~~~A~~~a~~~~~~h~~~~~~~~~geni~~~~~-~~~~~~~v~~W~~   82 (149)
T d1smba_           4 KQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASY-DQTGKEVADRWYS   82 (149)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHHHHHHHHHCCCCCCHHHHTTSSEEEEEEESS-CCCHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHHHHHcCCCcchhhHHHHHHHHHHHHhhcccccccccccccccccCceeeecCC-CccHHHHHHHHHH
Confidence            568999999999999999999999999999999999999999999999853    68999998753 3478999999999


Q ss_pred             ccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          118 EQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       118 e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      |..+|+|..+.|.  ..+||||||||++|++||||
T Consensus        83 e~~~y~~~~~~~~--~~~ghftqmvw~~t~~vGCg  115 (149)
T d1smba_          83 EIKNYNFQQPGFT--SGTGHFTAMVWKNTKKMGVG  115 (149)
T ss_dssp             GGGGCCTTSCCCC--GGGHHHHHHHCTTCCEEEEE
T ss_pred             HHhhcccCCCCcc--cccchhhheecCCceEeeEE
Confidence            9999999998886  56899999999999999997

>d1rc9a1 d.111.1.1 (A:1-164) Cysteine-rich secretory protein (SteCRISP) {Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Cysteine-rich secretory protein (SteCRISP)
species: Chinese green tree viper (Trimeresurus stejnegeri) [TaxId: 39682]

Probab=99.96  E-value=4e-30  Score=181.37  Aligned_cols=110  Identities=20%  Similarity=0.370  Sum_probs=96.7

Q ss_pred             CCCChhHHhhHHHHHhHHHHhCCCC-----CCcccHHHHHHHHHHHHHhccCCCccCCCC--------CccceeeeccCC
Q 047831           38 GSPQRNTIQQYPVTRKIVKAKLGLP-----PLQWRKKLANFASWWVNQQRRDCDLVHSNS--------NHGESLFWGSGK  104 (152)
Q Consensus        38 ~~~~~~~~~~il~~hN~~R~~~~~~-----~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~--------~~GeNi~~~~~~  104 (152)
                      .+...+++++||+.||.+|+.++.+     +|+||.+|+..||.||+    +|...|+..        .+|||++..+. 
T Consensus         8 ~~~~~~~~~~il~~HN~~R~~~~~~a~~m~~L~Wd~~La~~A~~~a~----~c~~~~~~~~~~~~~~~~~g~n~~~~~~-   82 (164)
T d1rc9a1           8 SPRKPEIQNEIVDLHNSLRRSVNPTASNMLRMEWYPEAADNAERWAY----RCIESHSSYESRVIEGIKCGENIYMSPY-   82 (164)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGGEETTEECEEEEEEESS-
T ss_pred             CCCCHHHHHHHHHHHHHHHHHcCCCcccccccccCHHHHHHHHHHHH----HHhhccCCcccccccccccceEEEEecC-
Confidence            5566789999999999999999744     59999999999999999    888877753        68999986543 


Q ss_pred             CCCHHHHHHHHHhccccCCCCCCCCCCCCCChhHHHHHHHhcCccccC
Q 047831          105 NWKSADAVAAWAAEQGYYNHKTNSCSRYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus       105 ~~~~~~~v~~W~~e~~~y~~~~~~~~~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ..++.++|+.||+|..+|+|..+.+..+..++|||||||++|++||||
T Consensus        83 ~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~ghftqmvW~~t~~vGCa  130 (164)
T d1rc9a1          83 PMKWTDIIHAWHDEYKDFKYGVGADPPNAVTGHYTQIVWYKSYRIGCA  130 (164)
T ss_dssp             CCCHHHHHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEE
T ss_pred             CCCHHHHHHHHhhhhheeecCCCCCCCcchhhHHHHHhhhcccEEeEE
Confidence            347899999999999999999888887788999999999999999997

>d1qnxa_ d.111.1.1 (A:) Insect allergen 5 (AG5) {Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]}

class: Alpha and beta proteins (a+b)
fold: PR-1-like
superfamily: PR-1-like
family: PR-1-like
domain: Insect allergen 5 (AG5)
species: Yellow jacket (Vespula vulgaris), Ves v 5 [TaxId: 7454]

Probab=99.94  E-value=1.1e-27  Score=174.59  Aligned_cols=110  Identities=25%  Similarity=0.445  Sum_probs=91.9

Q ss_pred             CCChhHHhhHHHHHhHHHHhC-----------------CCCCCcccHHHHHHHHHHHHHhccCCCccCCCC------Ccc
Q 047831           39 SPQRNTIQQYPVTRKIVKAKL-----------------GLPPLQWRKKLANFASWWVNQQRRDCDLVHSNS------NHG   95 (152)
Q Consensus        39 ~~~~~~~~~il~~hN~~R~~~-----------------~~~~L~wd~~La~~Aq~~A~~~a~~c~~~h~~~------~~G   95 (152)
                      ....++++.||+.||.+|+.+                 .|++|+||++|+..||.||+    +|...|+..      .+|
T Consensus        40 ~~t~~~r~~iL~~HN~~R~~vA~G~~~~~~~~~~P~A~~M~~L~Wd~eLa~~A~~~a~----~C~~~~~~~~~~~~~~~G  115 (209)
T d1qnxa_          40 GLTKQEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMKNLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVG  115 (209)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCCCCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcccccccccCCCCccccCccceECHHHHHHHHHHHh----hcccCCCcccCCCCCCCc
Confidence            445789999999999999875                 26679999999999999999    888887642      679


Q ss_pred             ceeeeccC---CCCCHHHHHHHHHhccccCCCCCCCCC-CCCCChhHHHHHHHhcCccccC
Q 047831           96 ESLFWGSG---KNWKSADAVAAWAAEQGYYNHKTNSCS-RYKDCLRYTQMVWRQSLKVGCL  152 (152)
Q Consensus        96 eNi~~~~~---~~~~~~~~v~~W~~e~~~y~~~~~~~~-~~~~~~hftqmvW~~t~~vGCa  152 (152)
                      ||+++...   ...++.++|+.|++|..+|++..+.+. .+..+||||||||++|++||||
T Consensus       116 en~~~~~~~~~~~~~~~~~v~~W~~E~~~~~~~~~~~~~~~~~~ghftQmvw~~t~~VGCa  176 (209)
T d1qnxa_         116 QNVALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCG  176 (209)
T ss_dssp             EEEEEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEE
T ss_pred             ceeeecccCCcCcccHHHHHHHHHHHhhhcCCCcccccCCccccchhHHHhhhhhCEEeEE
Confidence            99976532   234689999999999999999876654 3356999999999999999997