Citrus Sinensis ID: 047851

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Protein Sequence
TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNGAFQG
Secondary Structure (PSIPRED)
cHHHHHHHHHHccHHHHcHHEEEcccHHHHHHHHHHHHcccHHHHccEEEEccccHHHHHHHHccccccccccccccccccccccHHccHHHHHcHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHccHHHHHHHHHHcHHHHHHHHHHHHcHcccHHHHcEEEEEccccHcHHHHHHHHccHHHHHHHHcccccEEEcHHHHHHHHHHHHHHHHHHcccccccccccccccEcc
Coil and Loop (DISEMBL)
TIRDIIYIFQNHYPERLAIsilynppkffESIWKAIRYFldprttqklkfiypnnkESLAFMKssfdvenlptefggkatlqydhEEFSRLMaqddvktarfwglddqrprkitngafqg
Flexible Loop (DISEMBL)
TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTArfwglddqrprkitngafqg
Low Complexity Region (SEG)
TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNGAFQG
Disordered region (IsUnstruct)
**RDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGL***************
Disordered Region (DISOPRED)
TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVK**********************
Disordered Region (DISEMBL)
TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNGAFQG
Disordered Region (DISPRO)
TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGL***************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNGAFQG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	120	2.2.26 [Sep-21-2011]
P45816	492	SEC14 cytosolic factor OS	no	no	0.633	0.154	0.367	2e-07
P33324	310	CRAL-TRIO domain-containi	yes	no	0.7	0.270	0.321	4e-07
P53989	302	SEC14 cytosolic factor OS	no	no	0.641	0.254	0.375	6e-07
Q55CU8	364	Random slug protein 5 OS=	no	no	0.691	0.228	0.313	2e-06
P24280	304	SEC14 cytosolic factor OS	no	no	0.641	0.253	0.337	3e-06
Q10138	444	CRAL-TRIO domain-containi	yes	no	0.675	0.182	0.302	9e-06
Q757H2	436	Phosphatidylinositol tran	no	no	0.65	0.178	0.301	1e-05
Q9UU99	1008	CRAL-TRIO domain-containi	no	no	0.65	0.077	0.313	2e-05
P53860	351	Phosphatidylinositol tran	no	no	0.725	0.247	0.333	3e-05
P53844	350	Phosphatidylinositol tran	no	no	0.766	0.262	0.313	6e-05

>sp|P45816|SEC14_YARLI SEC14 cytosolic factor OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC14 PE=3 SV=2

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           ++D   I QN+YPER+    L N P  F +++  I+ FLDP T  K+     N KE L  
Sbjct: 193 LKDASNIGQNYYPERMGKFYLINAPFGFSTVFSVIKRFLDPVTVSKIHVYGSNYKEKLLA 252

Query: 62  MKSSFDVENLPTEFGGKAT 80
              ++   NLP +FGG+++
Sbjct: 253 QVPAY---NLPIKFGGQSS 268

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.
Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|P33324|YKJ1_YEAST CRAL-TRIO domain-containing protein YKL091C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL091C PE=1 SV=2

 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 3/87 (3%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           I+D+  I QN+YPER+    + + P  F +++K ++ FLDP T  K+  +  + K+ L  
Sbjct: 196 IKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELL- 254

Query: 62  MKSSFDVENLPTEFGGKATLQYDHEEF 88
                 +ENLP ++GG + L   +++F
Sbjct: 255 --KQIPIENLPVKYGGTSVLHNPNDKF 279

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P53989|SEC14_CANGA SEC14 cytosolic factor OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC14 PE=3 SV=1

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           +R+  YI QN+YPER+    L N P  F + ++  + FLDP T  K+ FI  ++ +S   
Sbjct: 192 VREASYISQNYYPERMGKFYLINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQSELL 250

Query: 62  MKSSFDVENLPTEFGGKATL 81
            +     ENLP++FGGK+ +
Sbjct: 251 KQ--IPAENLPSKFGGKSEV 268

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro.

Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) (taxid: 284593)

>sp|Q55CU8|RSC5_DICDI Random slug protein 5 OS=Dictyostelium discoideum GN=rsc5 PE=2 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)

Query: 6   IYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYP---NNKESLAFM 62
           ++   +H PER+  S+  +PP  F   WK I  FL+  T  K++FI     + K + A +
Sbjct: 201 MHFLLDHCPERMGQSLFLDPPALFWFAWKIISPFLNEVTLSKVRFINSKKVDGKRTFAEL 260

Query: 63  KSSFDVENLPTEFGGKATLQYDHEEF 88
               D+ENL    GG     Y+ +E+
Sbjct: 261 LEYVDIENLEQNLGGNLDYNYNIDEY 286

Dictyostelium discoideum (taxid: 44689)

>sp|P24280|SEC14_YEAST SEC14 cytosolic factor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC14 PE=1 SV=3

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           +R+  YI QN+YPER+    + N P  F + ++  + FLDP T  K+  +  + ++ L  
Sbjct: 194 VREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELL- 252

Query: 62  MKSSFDVENLPTEFGGKATL 81
                  ENLP +FGGK+ +
Sbjct: 253 --KQIPAENLPVKFGGKSEV 270

Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro. Essential for viability and secretion.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q10138|YAS2_SCHPO CRAL-TRIO domain-containing protein C3H8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H8.02 PE=1 SV=1

 Score = 48.9 bits (115), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 5/86 (5%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           ++ +I  F+ HYPE L   I++  P  F+ +W  I+ +LDP    K+KF   N ++    
Sbjct: 254 LKFMIKCFEAHYPECLGECIVHKAPWLFQGVWSIIKSWLDPVVVSKVKFTR-NYRD---- 308

Query: 62  MKSSFDVENLPTEFGGKATLQYDHEE 87
           ++   + +N+  EFGG    +Y + E
Sbjct: 309 LQQYINPDNILKEFGGPNPWRYTYPE 334

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q757H2|CSR1_ASHGO Phosphatidylinositol transfer protein CSR1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CSR1 PE=3 SV=2

 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           ++ +I  F+ HYPE L    ++  P  F  IW  I+ +LDP    K+ F      ++ A 
Sbjct: 271 VKFLITCFEAHYPECLGKLFIHKAPWIFPPIWNIIKNWLDPVVAAKIAFT-----KTAAD 325

Query: 62  MKSSFDVENLPTEFGGKATLQYD 84
           ++     E +P E GGK    +D
Sbjct: 326 LEEFIPAEQIPLELGGKDEYNFD 348

Non-classical phosphatidylinositol (PtdIns) transfer protein (PITP), which exhibits PtdIns-binding/transfer activity in the absence of detectable PtdCho-binding/transfer activity. May also regulate post-Golgi membrane-trafficking events and have a role resistance to oxidative stress.

Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) (taxid: 284811)

>sp|Q9UU99|YJX4_SCHPO CRAL-TRIO domain-containing protein C23B6.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC23B6.04c PE=1 SV=1

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)

Query: 3   RDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFM 62
           ++++ I Q HY ERL  +++ N P      +K I  F+DP T +KLKF  P        +
Sbjct: 756 KEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKFNEP--------L 807

Query: 63  KSSFDVENLPTEFGGKATLQYDHEEF 88
                 + L + FGG    +Y HE++
Sbjct: 808 DRYVPKDQLDSNFGGSLHFEYHHEKY 833

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P53860|PDR16_YEAST Phosphatidylinositol transfer protein PDR16 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR16 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 12/99 (12%)

Query: 3   RDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFM 62
           +++++I Q HYPERL  ++L N P    +  K I  F+DP T +KL F  P       F+
Sbjct: 223 KEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREKLVFDEP-------FV 275

Query: 63  KSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTAR 101
           K     E L + +GG    +Y+H+ +   +    V+TAR
Sbjct: 276 KYVPKNE-LDSLYGGDLKFKYNHDVYWPAL----VETAR 309

Has phosphatidylinositol transfer activity. Involved in the regulation of the phospholipid composition of plasma- and endomembranes. Altering plasma membrane composition may provide a possible mechanism for multidrug resistance. Involved in the regulation of sterol biosynthesis. Contributes to efficient phospholipase D1 activation in the regulation of phospholipid turnover.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|P53844|PDR17_YEAST Phosphatidylinositol transfer protein PDR17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PDR17 PE=1 SV=1

 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 10/102 (9%)

Query: 3   RDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFM 62
           R  + + Q+HYPERLA  +L N P F  +  K +  FLDP T  K  F  P         
Sbjct: 225 RMCLNVMQDHYPERLAKCVLINIPWFAWAFLKMMYPFLDPATKAKAIFDEP--------F 276

Query: 63  KSSFDVENLPTEFGGKATLQYDHEEFSRLMAQ--DDVKTARF 102
           ++  +   L   + G    +Y HE +   M +  DD++  RF
Sbjct: 277 ENHIEPSQLDALYNGLLDFKYKHEVYWPDMVKKVDDLRLKRF 318

Has phosphatidylinositol transfer activity. Involved in the regulation of the phospholipid composition of plasma- and endomembranes. Altering plasma membrane composition may provide a possible mechanism for multidrug resistance. Contributes to efficient phospholipase D1 activation and phospholipase B1 inhibition in the regulation of phospholipid turnover.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
359476700	296	PREDICTED: CRAL-TRIO domain-containing p	0.958	0.388	0.724	4e-45
297735160	290	unnamed protein product [Vitis vinifera]	0.958	0.396	0.724	5e-45
388505484	296	unknown [Lotus japonicus] gi|388511721|g	0.966	0.391	0.672	1e-44
359807349	296	uncharacterized protein LOC100782334 [Gl	0.975	0.395	0.683	1e-44
255561170	294	transporter, putative [Ricinus communis]	0.958	0.391	0.681	2e-43
224134296	294	predicted protein [Populus trichocarpa]	0.958	0.391	0.681	4e-43
358249208	296	uncharacterized protein LOC100800024 [Gl	0.975	0.395	0.658	7e-43
357518335	290	Phosphatidylinositol transfer protein PD	0.966	0.4	0.629	4e-42
357518337	318	Phosphatidylinositol transfer protein PD	0.966	0.364	0.629	8e-42
224094769	294	predicted protein [Populus trichocarpa]	0.958	0.391	0.663	3e-41

>gi|359476700|ref|XP_002266907.2| PREDICTED: CRAL-TRIO domain-containing protein C23B6.04c [Vitis vinifera]

 Score =  185 bits (469), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 84/116 (72%), Positives = 97/116 (83%), Gaps = 1/116 (0%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T RDII I QNHYPERLAI ILYNPP+ F + WK ++YFLDP+T QK+KF+YP NKESL 
Sbjct: 168 TARDIINILQNHYPERLAICILYNPPRIFVAFWKVVKYFLDPKTFQKVKFVYPKNKESLE 227

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
            MKS FDVENLP EFGGKATL+YDHEEFSR+MA+DDVKTA +WGLD  +P  +TNG
Sbjct: 228 VMKSLFDVENLPGEFGGKATLKYDHEEFSRMMAEDDVKTASYWGLDS-KPCHVTNG 282

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735160|emb|CBI17522.3| unnamed protein product [Vitis vinifera]

 Score =  184 bits (468), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 84/116 (72%), Positives = 97/116 (83%), Gaps = 1/116 (0%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T RDII I QNHYPERLAI ILYNPP+ F + WK ++YFLDP+T QK+KF+YP NKESL 
Sbjct: 162 TARDIINILQNHYPERLAICILYNPPRIFVAFWKVVKYFLDPKTFQKVKFVYPKNKESLE 221

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
            MKS FDVENLP EFGGKATL+YDHEEFSR+MA+DDVKTA +WGL D +P  +TNG
Sbjct: 222 VMKSLFDVENLPGEFGGKATLKYDHEEFSRMMAEDDVKTASYWGL-DSKPCHVTNG 276

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388505484|gb|AFK40808.1| unknown [Lotus japonicus] gi|388511721|gb|AFK43922.1| unknown [Lotus japonicus]

 Score =  183 bits (464), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 100/116 (86%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T RDII+I QNHYPERLAI+ L+NPP+ F++ +KA++YFLDP+T QK+KF+YPNNK+S+ 
Sbjct: 163 TARDIIHILQNHYPERLAIAFLFNPPRIFQAFYKAVKYFLDPKTAQKVKFVYPNNKDSVE 222

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
            MKS FD++NLP+EFGGKATL+YDHEEFSRLM +DDVKTA++WG DD +P    NG
Sbjct: 223 LMKSLFDIDNLPSEFGGKATLKYDHEEFSRLMTEDDVKTAKYWGFDDDKPFTTMNG 278

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807349|ref|NP_001241635.1| uncharacterized protein LOC100782334 [Glycine max] gi|255637795|gb|ACU19219.1| unknown [Glycine max]

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 82/120 (68%), Positives = 102/120 (85%), Gaps = 3/120 (2%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T RDII+I QNHYPERLAI+ LYNPP+ F++ WKAIR+FLDP T QK+KF+YPNNK+S+ 
Sbjct: 163 TSRDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAIRFFLDPNTVQKVKFVYPNNKDSVE 222

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQ---RPRKITNGA 117
            MKS FD+ENLP+EFGGK +L+YDHEEFSRLM +DDVKTA+FWGLD++    P+K  +GA
Sbjct: 223 LMKSLFDMENLPSEFGGKTSLKYDHEEFSRLMTEDDVKTAKFWGLDEEPFNPPKKGHSGA 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255561170|ref|XP_002521597.1| transporter, putative [Ricinus communis] gi|223539275|gb|EEF40868.1| transporter, putative [Ricinus communis]

 Score =  179 bits (453), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 79/116 (68%), Positives = 95/116 (81%), Gaps = 1/116 (0%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T RDII I QNHYPERLAI+ LYNPP+ FE+ WKA++YFLDP+T QK+KF+YP NK+S+ 
Sbjct: 162 TSRDIINILQNHYPERLAIAFLYNPPRIFEAFWKAVKYFLDPKTFQKVKFVYPKNKDSVE 221

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
            M S FD +NLP EFGGK T+ YDHEEFSR+MAQDDVKTA+FWG DD +P  + NG
Sbjct: 222 LMSSLFDADNLPGEFGGKTTMNYDHEEFSRMMAQDDVKTAKFWGFDD-KPSYVANG 276

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134296|ref|XP_002327803.1| predicted protein [Populus trichocarpa] gi|222836888|gb|EEE75281.1| predicted protein [Populus trichocarpa]

 Score =  178 bits (451), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 79/116 (68%), Positives = 96/116 (82%), Gaps = 1/116 (0%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T RD I I QNHYPERLA+++LYNPP+ FE+ WK ++YFLDP T QK+KF+YP  ++S+ 
Sbjct: 162 TARDCINILQNHYPERLAVALLYNPPRIFEAFWKVVKYFLDPLTFQKVKFVYPKKEDSVE 221

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
            MKS FDV+NLP EFGGKATL YDHEEFSRLM+QDDVKTA+FWGL D++P  I NG
Sbjct: 222 LMKSFFDVDNLPNEFGGKATLNYDHEEFSRLMSQDDVKTAKFWGL-DEKPSHIANG 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249208|ref|NP_001239755.1| uncharacterized protein LOC100800024 [Glycine max] gi|255646050|gb|ACU23512.1| unknown [Glycine max]

 Score =  177 bits (449), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 79/120 (65%), Positives = 100/120 (83%), Gaps = 3/120 (2%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T RDII+I QNHYPERLAI+ +YNPP+ F++ WKAIR+FLDP+T QK+KF+YPNNK+S+ 
Sbjct: 163 TSRDIIHILQNHYPERLAIAFMYNPPRIFQAFWKAIRFFLDPKTVQKVKFVYPNNKDSVE 222

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQ---RPRKITNGA 117
            +KS F  ENLP+EFGGK +L YDHEEFSRLM +DDVKTA+FWGLD++    P+K  +GA
Sbjct: 223 LIKSLFPTENLPSEFGGKTSLNYDHEEFSRLMTEDDVKTAKFWGLDEKPFNPPKKGHSGA 282

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357518335|ref|XP_003629456.1| Phosphatidylinositol transfer protein PDR17 [Medicago truncatula] gi|355523478|gb|AET03932.1| Phosphatidylinositol transfer protein PDR17 [Medicago truncatula]

 Score =  175 bits (443), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 73/116 (62%), Positives = 99/116 (85%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T R+II+I Q HYPERL I+IL+NPP+ F++ +KAI++FLDP+T QK+KF+YPN+K+S+ 
Sbjct: 163 TAREIIHILQGHYPERLGIAILHNPPRIFQAFYKAIKFFLDPKTAQKVKFVYPNSKDSVE 222

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
            MKS FD++NLP+EFGGK TL+YDHEEFSRLM ++D KTA+FWG+DD++P    NG
Sbjct: 223 LMKSLFDMDNLPSEFGGKTTLKYDHEEFSRLMTEEDAKTAKFWGIDDEKPFTTKNG 278

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357518337|ref|XP_003629457.1| Phosphatidylinositol transfer protein PDR17 [Medicago truncatula] gi|355523479|gb|AET03933.1| Phosphatidylinositol transfer protein PDR17 [Medicago truncatula]

 Score =  174 bits (440), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 73/116 (62%), Positives = 99/116 (85%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T R+II+I Q HYPERL I+IL+NPP+ F++ +KAI++FLDP+T QK+KF+YPN+K+S+ 
Sbjct: 191 TAREIIHILQGHYPERLGIAILHNPPRIFQAFYKAIKFFLDPKTAQKVKFVYPNSKDSVE 250

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
            MKS FD++NLP+EFGGK TL+YDHEEFSRLM ++D KTA+FWG+DD++P    NG
Sbjct: 251 LMKSLFDMDNLPSEFGGKTTLKYDHEEFSRLMTEEDAKTAKFWGIDDEKPFTTKNG 306

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224094769|ref|XP_002310229.1| predicted protein [Populus trichocarpa] gi|222853132|gb|EEE90679.1| predicted protein [Populus trichocarpa]

 Score =  172 bits (435), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 77/116 (66%), Positives = 93/116 (80%), Gaps = 1/116 (0%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
           T R+ I I QNHYPERLA++ LYNPP+ FE+ WK +++FLDP T QK+KF+YP  ++S  
Sbjct: 162 TARECINILQNHYPERLAVAFLYNPPRIFEAFWKVVKFFLDPITIQKVKFVYPKKEDSFE 221

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
            MKS FDV+NLP EFGGKATL YDHEEFSRLMAQDDVKTA+FWGL D++P  I N 
Sbjct: 222 LMKSFFDVDNLPNEFGGKATLTYDHEEFSRLMAQDDVKTAKFWGL-DEKPSHIANS 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	120
TAIR|locus:2115320	294	AT4G36640 [Arabidopsis thalian	0.958	0.391	0.594	1.3e-36
TAIR|locus:2025202	296	AT1G75170 "AT1G75170" [Arabido	0.975	0.395	0.583	1.5e-35
TAIR|locus:2138606	301	AT4G08690 "AT4G08690" [Arabido	0.816	0.325	0.428	1e-20
TAIR|locus:2015066	314	AT1G22180 "AT1G22180" [Arabido	0.825	0.315	0.407	1.2e-19
SGD|S000001574	310	YKL091C "Putative homolog of S	0.7	0.270	0.333	8.3e-09
DICTYBASE|DDB_G0275959	247	DDB_G0275959 "cellular retinal	0.658	0.319	0.294	3.4e-08
UNIPROTKB|G4NEY9	403	MGG_00707 "CRAL/TRIO domain-co	0.775	0.230	0.339	5.1e-08
SGD|S000004684	304	SEC14 "Phosphatidylinositol/ph	0.625	0.246	0.371	6.1e-08
ASPGD|ASPL0000053954	471	AN0485 [Emericella nidulans (t	0.675	0.171	0.337	6.6e-08
TAIR|locus:2006732	252	AT1G14820 "AT1G14820" [Arabido	0.583	0.277	0.361	2.9e-07

TAIR|locus:2115320 AT4G36640 [Arabidopsis thaliana (taxid:3702)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 69/116 (59%), Positives = 94/116 (81%)

Query:     1 TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
             T R+II+I QN+YPERL I+ LYNPP+ F+++++A +YFLDPRT +K+KF+YP +K S  
Sbjct:   161 TTREIIHILQNYYPERLGIAFLYNPPRLFQAVYRAAKYFLDPRTAEKVKFVYPKDKASDE 220

Query:    61 FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKITNG 116
              M + FDVENLP EFGG+ATL+YDHE+FSR M +DD+KTA++WGL+ +   K TNG
Sbjct:   221 LMTTHFDVENLPKEFGGEATLEYDHEDFSRQMYEDDLKTAKYWGLEGKHYPK-TNG 275

GO:0005215 "transporter activity" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0006810 "transport" evidence=IEA;ISS

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

TAIR|locus:2025202 AT1G75170 "AT1G75170" [Arabidopsis thaliana (taxid:3702)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 70/120 (58%), Positives = 89/120 (74%)

Query:     3 RDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFM 62
             R+ I I QNHYPERLA++ LYNPP+ FE+ WK ++YF+D +T  K+KF+YP N ES+  M
Sbjct:   166 RETINILQNHYPERLAVAFLYNPPRLFEAFWKIVKYFIDAKTFVKVKFVYPKNSESVELM 225

Query:    63 KSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRKI--TNGAFQG 120
              + FD ENLPTEFGGKA LQY++EEFS+ M QDDVKTA FWGL      ++  +NG F G
Sbjct:   226 STFFDEENLPTEFGGKALLQYNYEEFSKQMNQDDVKTANFWGLGHSNNNQLHASNG-FSG 284

GO:0005215 "transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=ISS

TAIR|locus:2138606 AT4G08690 "AT4G08690" [Arabidopsis thaliana (taxid:3702)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 42/98 (42%), Positives = 63/98 (64%)

Query:     1 TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
             T ++  ++ Q HYPERLA ++LYNPPKFFE  WK  R FL+P+T  K+KF+Y ++  +  
Sbjct:   162 TTKETAHVLQEHYPERLAFAVLYNPPKFFEPFWKVARPFLEPKTRNKVKFVYSDDPNTKV 221

Query:    61 FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVK 98
              M+ +FD+E +   FGG     ++ E+ S  M +DD K
Sbjct:   222 IMEENFDMEKMELAFGGNDDSGFNIEKHSERMKEDDKK 259

GO:0005215 "transporter activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006810 "transport" evidence=ISS

GO:0042546 "cell wall biogenesis" evidence=RCA

TAIR|locus:2015066 AT1G22180 "AT1G22180" [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
 Identities = 42/103 (40%), Positives = 70/103 (67%)

Query:     3 RDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFM 62
             R+  ++ Q HYPERL ++I+YNPPK FES +K ++ FL+P+T+ K+KF+Y ++  S   +
Sbjct:   167 RETAHVLQEHYPERLGLAIVYNPPKIFESFYKMVKPFLEPKTSNKVKFVYSDDNLSNKLL 226

Query:    63 KSSFDVENLPTEFGGK-ATLQYDHEEFSRLMAQDDVKTARFWG 104
             +  FD+E L   FGGK +   ++ E+++  M +DD+K   F+G
Sbjct:   227 EDLFDMEQLEVAFGGKNSDAGFNFEKYAERMREDDLK---FYG 266

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031348 "negative regulation of defense response" evidence=RCA

SGD|S000001574 YKL091C "Putative homolog of Sec14p" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 137 (53.3 bits), Expect = 8.3e-09, P = 8.3e-09
 Identities = 29/87 (33%), Positives = 52/87 (59%)

Query:     2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
             I+D+  I QN+YPER+    + + P  F +++K ++ FLDP T  K+  +  + K+ L  
Sbjct:   196 IKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKEL-- 253

Query:    62 MKSSFDVENLPTEFGGKATLQYDHEEF 88
             +K    +ENLP ++GG + L   +++F
Sbjct:   254 LKQ-IPIENLPVKYGGTSVLHNPNDKF 279

GO:0031210 "phosphatidylcholine binding" evidence=IDA

GO:0035091 "phosphatidylinositol binding" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0008525 "phosphatidylcholine transporter activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0008526 "phosphatidylinositol transporter activity" evidence=IDA

DICTYBASE|DDB_G0275959 DDB_G0275959 "cellular retinaldehyde-binding/triple function domain-containing protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 129 (50.5 bits), Expect = 3.4e-08, P = 3.4e-08
 Identities = 25/85 (29%), Positives = 47/85 (55%)

Query:     2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
             ++ ++ +FQ  YPE L   ++ N P  F  IW  I+++LDP T  K+ F+    K+ + +
Sbjct:   164 VKFMVELFQKFYPESLQKCLILNAPWIFMGIWHIIKHWLDPNTASKVSFV--KTKQLVDY 221

Query:    62 MKSSFDVENLPTEFGGKATLQYDHE 86
             +      + L + +GG +T +Y +E
Sbjct:   222 IPK----DQLESSYGGTSTFKYTYE 242

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|G4NEY9 MGG_00707 "CRAL/TRIO domain-containing protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 132 (51.5 bits), Expect = 5.1e-08, P = 5.1e-08
 Identities = 36/106 (33%), Positives = 54/106 (50%)

Query:     3 RDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFM 62
             R+++ I Q HYPERL  +++ N P   +  +K I  F+DP T  KLKF    N++    M
Sbjct:   202 REVLNILQTHYPERLGRALIVNVPWVVQGFFKLITPFIDPLTRDKLKF----NED----M 253

Query:    63 KSSFDVENLPTEF-GGKATLQYDHEEF---SRLMAQD-DVKTARFW 103
              +    E L TE  GG    +YDH  +    R M ++  V+  + W
Sbjct:   254 SNYVPKEQLWTEISGGALEFEYDHSTYWPALRKMCEERQVEKEKRW 299

GO:0005575 "cellular_component" evidence=ND

SGD|S000004684 SEC14 "Phosphatidylinositol/phosphatidylcholine transfer protein" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 129 (50.5 bits), Expect = 6.1e-08, P = 6.1e-08
 Identities = 29/78 (37%), Positives = 45/78 (57%)

Query:     2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
             +R+  YI QN+YPER+    + N P  F + ++  + FLDP T  K+ FI  ++ +    
Sbjct:   194 VREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKI-FILGSSYQK-EL 251

Query:    62 MKSSFDVENLPTEFGGKA 79
             +K     ENLP +FGGK+
Sbjct:   252 LKQ-IPAENLPVKFGGKS 268

GO:0015914 "phospholipid transport" evidence=IMP;IDA

GO:2001246 "negative regulation of phosphatidylcholine biosynthetic process" evidence=IMP;IDA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IMP

GO:0046488 "phosphatidylinositol metabolic process" evidence=IGI;IMP

GO:0048194 "Golgi vesicle budding" evidence=IDA

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:1901352 "negative regulation of phosphatidylglycerol biosynthetic process" evidence=IMP

GO:0008526 "phosphatidylinositol transporter activity" evidence=IMP;IDA

GO:0008525 "phosphatidylcholine transporter activity" evidence=IMP;IDA

GO:0005829 "cytosol" evidence=IDA

GO:0000139 "Golgi membrane" evidence=IEA;IDA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0006896 "Golgi to vacuole transport" evidence=IGI;IMP

GO:0005215 "transporter activity" evidence=IEA

GO:0030437 "ascospore formation" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA;IDA

GO:0005737 "cytoplasm" evidence=IDA

ASPGD|ASPL0000053954 AN0485 [Emericella nidulans (taxid:162425)]

 Score = 132 (51.5 bits), Expect = 6.6e-08, P = 6.6e-08
 Identities = 29/86 (33%), Positives = 46/86 (53%)

Query:     2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
             ++ II  FQ++YPE L   +++N P  F  IWK I+ ++DP    K+ F   N  + LA 
Sbjct:   267 VKFIIECFQDNYPECLGNLLIHNAPWIFSGIWKIIKGWMDPVIVSKVHFT--NGAKDLA- 323

Query:    62 MKSSFDVENLPTEFGGKATLQYDHEE 87
                  D++ +P E GG     Y++ E
Sbjct:   324 --KFIDMDKIPKELGGNEDWTYEYAE 347

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

TAIR|locus:2006732 AT1G14820 "AT1G14820" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 26/72 (36%), Positives = 42/72 (58%)

Query:    10 QNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVE 69
             Q++YPERLA   + + P FF ++WK +  FL+  T +K+  I  + +E   F +     +
Sbjct:   162 QSYYPERLAKCYILHMPGFFVTVWKFVCRFLEKATQEKI-VIVTDGEEQRKF-EEEIGAD 219

Query:    70 NLPTEFGGKATL 81
              LP E+GG+A L
Sbjct:   220 ALPEEYGGRAKL 231

GO:0005215 "transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006810 "transport" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00024935001 SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (290 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	120
smart00516	158	smart00516, SEC14, Domain in homologues of a S	1e-20
pfam00650	152	pfam00650, CRAL_TRIO, CRAL/TRIO domain	1e-19
cd00170	157	cd00170, SEC14, Sec14p-like lipid-binding domain	5e-18
pfam13716	149	pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain	7e-08

>gnl|CDD|214706 smart00516, SEC14, Domain in homologues of a S

 Score = 81.2 bits (201), Expect = 1e-20
 Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 3/78 (3%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
            +R I+ I Q+HYPERL    + NPP FF  +WK I+ FLD +T +K++F+  ++KE L 
Sbjct: 82  VLRKILKILQDHYPERLGKVYIINPPWFFRVLWKIIKPFLDEKTREKIRFVGNDSKEELL 141

Query: 61  FMKSSFDVENLPTEFGGK 78
                 D E LP E GG 
Sbjct: 142 EY---IDKEQLPEELGGT 156

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 158

>gnl|CDD|216042 pfam00650, CRAL_TRIO, CRAL/TRIO domain

 Score = 78.1 bits (193), Expect = 1e-19
 Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 3/78 (3%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
            ++ I+ I Q++YPERL   ++ N P  F  IWK I+ FLDP+T +K+ F   +N E L 
Sbjct: 78  FLKKILKILQDNYPERLGKILIVNAPWIFNVIWKLIKPFLDPKTREKIHFHKNSNLEEL- 136

Query: 61  FMKSSFDVENLPTEFGGK 78
                   E LP E+GG 
Sbjct: 137 --LKYIPPEQLPKEYGGT 152

Length = 152

>gnl|CDD|238099 cd00170, SEC14, Sec14p-like lipid-binding domain

 Score = 74.3 bits (183), Expect = 5e-18
 Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 4/77 (5%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           ++ I+ I Q++YPERL    + NPP FF+ +WK ++ FL  +T +K+ F+  ++KE L  
Sbjct: 85  LKKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLG-SDKEELLK 143

Query: 62  MKSSFDVENLPTEFGGK 78
                D E LP E+GG 
Sbjct: 144 Y---IDKEQLPEEYGGT 157

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits. Length = 157

>gnl|CDD|222339 pfam13716, CRAL_TRIO_2, Divergent CRAL/TRIO domain

 Score = 47.3 bits (113), Expect = 7e-08
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           ++ +  +    +P+ L    + +P  F +   K +      +   K K IY     SL+ 
Sbjct: 70  LKKLYKLLPRAFPKNLKAVYIVHPSTFLKKFLKTLGRLFSSKKLFKKKVIY---VSSLSE 126

Query: 62  MKSSFDVENLPTEFGGKATLQYDHE 86
           +    D   LP E GG   L YDHE
Sbjct: 127 LSEYIDPTQLPLELGG--VLSYDHE 149

This family includes divergent members of the CRAL-TRIO domain family. This family includes ECM25 that contains a divergent CRAL-TRIO domain identified by Gallego and colleagues. Length = 149

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	120
KOG1470	324	consensus Phosphatidylinositol transfer protein PD	99.84
PF00650	159	CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 T	99.84
KOG1471	317	consensus Phosphatidylinositol transfer protein SE	99.82
smart00516	158	SEC14 Domain in homologues of a S. cerevisiae phos	99.8
cd00170	157	SEC14 Sec14p-like lipid-binding domain. Found in s	99.76
PF13716	149	CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q	98.82
KOG4406	467	consensus CDC42 Rho GTPase-activating protein [Sig	97.12

>KOG1470 consensus Phosphatidylinositol transfer protein PDR16 and related proteins [Lipid transport and metabolism]

Probab=99.84  E-value=4.3e-21  Score=148.94  Aligned_cols=98  Identities=40%  Similarity=0.758  Sum_probs=89.3

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|.++++||+||||||+..+++|+||+|..+|++++|||+++|+.||+|+..     .+++.++||+++||..+||+...
T Consensus       171 ~k~~~~~lq~hYPErLg~a~l~~~P~iF~~~wkiikpflDp~t~~Kv~F~~~-----~~~l~~~~d~~~l~s~~GG~~~~  245 (324)
T KOG1470|consen  171 LKELLHILQDHYPERLGKALLVNAPWIFQPFWKIIKPFLDPKTASKVKFVEP-----KDDLSEYFDESQLPSLFGGKLLF  245 (324)
T ss_pred             HHHHHHHHHHhChHHhhhhhhcCChHHHHHHHHHhhhccChhhhceeEEecC-----hhHHHhhCCccccchhhCCCccc
Confidence            6889999999999999999999999999999999999999999999999864     46699999999999999999999


Q ss_pred             CCCcHHHHHHHhHhhHHHhhhhc
Q 047851           82 QYDHEEFSRLMAQDDVKTARFWG  104 (120)
Q Consensus        82 ~~~~~~~~~~~~~~d~~~~~~~~  104 (120)
                      .|.+..+|+.|.+.+...+..|.
T Consensus       246 ~y~~e~~~~~~~~~~~~~~~~~~  268 (324)
T KOG1470|consen  246 EYTHEEYWPQMKEDDSSLRLEYE  268 (324)
T ss_pred             ccCCcchhhhhhhhHHHHHHhHH
Confidence            99999999999988765444443

>PF00650 CRAL_TRIO: CRAL/TRIO domain; InterPro: IPR001251 This entry defines the C-terminal of various retinaldehyde/retinal-binding proteins that may be functional components of the visual cycle

Probab=99.84  E-value=2.6e-21  Score=134.64  Aligned_cols=75  Identities=40%  Similarity=0.763  Sum_probs=67.1

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGK   78 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~   78 (120)
                      +|.++++++++||+|++++|++|+|++++++|+++++||++++++||.++++.+  +.++|.++||+++||.+|||+
T Consensus        85 ~k~~~~~~~~~yP~rl~~i~iin~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~~--~~~~l~~~i~~~~lP~~~GG~  159 (159)
T PF00650_consen   85 LKKIIQLLQDHYPERLGKIYIINAPWFFRVLWKIVKPFLSPKTREKIVFHSGSD--WKAKLKEYIDPEQLPVEYGGT  159 (159)
T ss_dssp             HHHHHHHHHHHSTTTEEEEEEES--TTHHHHHHHHGGGS-HHHHCTEEEECTTC--HCHHHCCCSTGGGSBGGGTSS
T ss_pred             hhhhhhhhcccCCccceeEEEEecChhhhhhHhHHHhhcCHhhheeEEEECCcc--cHHHHHhhCCHhHCchhcCCC
Confidence            578999999999999999999999999999999999999999999999996544  447999999999999999996

Cellular retinaldehyde-binding protein (CRALBP) carries 11-cis-retinol or 11-cis-retinaldehyde as endogenous ligands and may function as a substrate carrier protein that modulates interaction of these retinoids with visual cycle enzymes []. The multidomain protein Trio binds the LAR transmembrane tyrosine phosphatase, contains a protein kinase domain, and has separate rac-specific and rho-specific guanine nucleotide exchange factor domains []. Trio is a multifunctional protein that integrates and amplifies signals involved in coordinating actin remodeling, which is necessary for cell migration and growth. Other members of the family are transfer proteins that include, guanine nucleotide exchange factor that may function as an effector of RAC1, phosphatidylinositol/phosphatidylcholine transfer protein that is required for the transport of secretory proteins from the golgi complex and alpha-tocopherol transfer protein that enhances the transfer of the ligand between separate membranes.; PDB: 1OIZ_A 1R5L_A 1OIP_A 3HX3_A 3HY5_A 1OLM_E 1O6U_E 3Q8G_A 3B7Q_B 3B7Z_A ....

>KOG1471 consensus Phosphatidylinositol transfer protein SEC14 and related proteins [Lipid transport and metabolism]

Probab=99.82  E-value=1.5e-20  Score=145.06  Aligned_cols=78  Identities=31%  Similarity=0.606  Sum_probs=72.7

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|+++.++|++||++++++||||+|++|+++|++++|||+++|++||++.+++   +.++|.++|++++||.+|||++++
T Consensus       183 ~~~~~~~~q~~yPe~l~~~~iIN~P~~f~~~~~~ikpfL~~kt~~ki~~~~~~---~~~~L~k~i~~~~LP~~yGG~~~~  259 (317)
T KOG1471|consen  183 LKKILKILQDNYPERLKRIHIINAPTIFSALWKVVKPFLDEKTRKKIHVLHSK---DKESLLKYIPPEVLPEEYGGTCGD  259 (317)
T ss_pred             HHHHHHHHHHhCHHhhceEEEEcCchhHHHHHHHHhccCCHHHHhhheecCCC---chhhhhhhCCHhhCccccCCCccc
Confidence            68899999999999999999999999999999999999999999999944444   489999999999999999999997


Q ss_pred             C
Q 047851           82 Q   82 (120)
Q Consensus        82 ~   82 (120)
                      .
T Consensus       260 ~  260 (317)
T KOG1471|consen  260 L  260 (317)
T ss_pred             c
Confidence            4

>smart00516 SEC14 Domain in homologues of a S

Probab=99.80  E-value=9e-20  Score=126.76  Aligned_cols=76  Identities=42%  Similarity=0.798  Sum_probs=71.7

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKAT   80 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~   80 (120)
                      +|+++++++++||+|++++||+|+|++++++|+++++|+++++++||++++++   +.+.|.++||+++||++|||++.
T Consensus        83 lk~~~~~~~~~yp~~l~~i~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~---~~~~L~~~i~~~~lP~~~GG~~~  158 (158)
T smart00516       83 LRKILKILQDHYPERLGKVLIINPPWFFRVLWKIIKPFLDEKTREKIRFVGND---SKEELLEYIDPEQLPEELGGTLD  158 (158)
T ss_pred             HHHHHHHHHHHhHHHhCeEEEECCCHHHHHHHHHHHhhcChhhhccEEEeCCC---CHHHHHhhCCHhhCcHhhCCCCC
Confidence            68899999999999999999999999999999999999999999999999764   37889999999999999999974

cerevisiae phosphatidylinositol transfer protein (Sec14p). Domain in homologues of a S. cerevisiae phosphatidylinositol transfer protein (Sec14p) and in RhoGAPs, RhoGEFs and the RasGAP, neurofibromin (NF1). Lipid-binding domain. The SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>cd00170 SEC14 Sec14p-like lipid-binding domain

Probab=99.76  E-value=1.6e-18  Score=118.71  Aligned_cols=73  Identities=37%  Similarity=0.760  Sum_probs=69.1

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGK   78 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~   78 (120)
                      +|+++++++++||++++++|++|+|++++++|+++++|+++++++||.+++++    .++|.++||+++||.+|||+
T Consensus        85 ~k~~~~~~~~~yp~~l~~v~ivn~p~~~~~~~~~~~~~l~~~~~~ki~~~~~~----~~~L~~~i~~~~Lp~~~GG~  157 (157)
T cd00170          85 LKKILKILQDNYPERLKAVYIINPPWFFKVLWKIVKPFLSEKTRKKIVFLGSD----KEELLKYIDKEQLPEEYGGT  157 (157)
T ss_pred             HHHHHHHHHHhChHhhCeEEEECCCHhHHHHHHHHHHhcCHhhhhhEEEecCC----HHHHHhhCChhhCcHhhCCC
Confidence            58899999999999999999999999999999999999999999999999642    68999999999999999996

Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to associate with G protein beta/gamma subunits.

>PF13716 CRAL_TRIO_2: Divergent CRAL/TRIO domain; PDB: 2D4Q_B 3PG7_B 2E2X_B 3P7Z_B 3PEG_A

Probab=98.82  E-value=2.4e-10  Score=79.35  Aligned_cols=75  Identities=17%  Similarity=0.400  Sum_probs=55.1

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHH-HHHHHhcCHhh-hcceeEECCCChhhHHHHhccCCCCCCCcccCCCc
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIW-KAIRYFLDPRT-TQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKA   79 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~-~ivk~~l~~~t-~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~   79 (120)
                      ++++.+++...|+..|+++||+|++++++.+. .+.+++.+.+. ..||.++.+     .++|.++||+++||+.+||+.
T Consensus        70 l~~~~~~l~~~~~~nl~~vyiv~p~~~~k~~~~~~~~~~~~~~~~~~kv~~~~s-----l~~L~~~i~~~qL~~~lp~~~  144 (149)
T PF13716_consen   70 LKQLYKLLPRKYKKNLKKVYIVHPNWFLKKILATLLRPFVSSKFWKKKVVYVSS-----LSELSKHIDPSQLPESLPGVL  144 (149)
T ss_dssp             HHHTTTSS-HHHHHTEEEEEEES--HHHHHHHHHTTTTGGGGTT--TTEEEESS-----TCGGGGTSGGGG------HHH
T ss_pred             HHHHHHHHHHHHhhceEEEEEECCCHHHHHHHHHHhcccccccccceEEEEECC-----HHHHHhhCCHHHhcccCCCEE
Confidence            46677788899999999999999999999999 55577788888 999998864     789999999999999999888


Q ss_pred             CC
Q 047851           80 TL   81 (120)
Q Consensus        80 ~~   81 (120)
                      ++
T Consensus       145 ~~  146 (149)
T PF13716_consen  145 QY  146 (149)
T ss_dssp             --
T ss_pred             ec
Confidence            73

>KOG4406 consensus CDC42 Rho GTPase-activating protein [Signal transduction mechanisms; Cytoskeleton]

Probab=97.12  E-value=0.00081  Score=54.49  Aligned_cols=59  Identities=15%  Similarity=0.358  Sum_probs=50.5

Q ss_pred             HHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCC
Q 047851            6 IYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVE   69 (120)
Q Consensus         6 ~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~   69 (120)
                      ..-+-.+|-.-++.+|+|.+.|+.+++|++++||++.+..+||.-+.     ..++|.+++.-+
T Consensus       155 Yke~Dr~~~KNlKalYvvHptwfikvi~n~~kplIS~KF~rKi~Y~n-----~lseL~~~l~l~  213 (467)
T KOG4406|consen  155 YKELDRNFKKNLKALYVVHPTWFIKVIWNLFKPLISLKFTRKIIYFN-----SLSELFEALKLN  213 (467)
T ss_pred             HHHHHHHHhhhhhheEEecHHHHHHHHHHHHhhhcchhhhceeEEee-----hHHHHHHhhhhh
Confidence            33445567788999999999999999999999999999999999885     389999987643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	120
3q8g_A	320	Resurrection Of A Functional Phosphatidylinositol T		3e-08
3b74_A	320	Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Co		3e-08
1aua_A	296	Phosphatidylinositol Transfer Protein Sec14p From S		3e-07
4fmm_A	360	Dimeric Sec14 Family Homolog 3 From Saccharomyces C		2e-06

>pdb|3Q8G|A Chain A, Resurrection Of A Functional Phosphatidylinositol Transfer Protein From A Pseudo-Sec14 Scaffold By Directed Evolution Length = 320

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           I+D+  I QN+YPER+    + + P  F +++K ++ FLDP T  K+  +  + K+ L  
Sbjct: 206 IKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELL- 264
Query: 62  MKSSFDVENLPTEFGGKATLQYDHEEF 88
                 +ENLP ++GG + L   +++F
Sbjct: 265 --KQIPIENLPVKYGGTSVLHNPNDKF 289

>pdb|3B74|A Chain A, Crystal Structure Of Yeast Sec14 Homolog Sfh1 In Complex With Phosphatidylethanolamine Length = 320

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           I+D+  I QN+YPER+    + + P  F +++K ++ FLDP T  K+  +  + K+ L  
Sbjct: 206 IKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKELL- 264
Query: 62  MKSSFDVENLPTEFGGKATLQYDHEEF 88
                 +ENLP ++GG + L   +++F
Sbjct: 265 --KQIPIENLPVKYGGTSVLHNPNDKF 289

>pdb|1AUA|A Chain A, Phosphatidylinositol Transfer Protein Sec14p From Saccharomyces Cerevisiae Length = 296

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           +R+  YI QN+YPER+    + N P  F + ++  + FLDP T  K+  +  + ++ L  
Sbjct: 191 VREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELL- 249
Query: 62  MKSSFDVENLPTEFGGKATL 81
                  ENLP +FGGK+ +
Sbjct: 250 --KQIPAENLPVKFGGKSEV 267

>pdb|4FMM|A Chain A, Dimeric Sec14 Family Homolog 3 From Saccharomyces Cerevisiae Presents Some Novel Features Of Structure That Lead To A Surprising "dimer- Monomer" State Change Induced By Substrate Binding Length = 360

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 3   RDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFM 62
           +++++I Q HYPERL  ++L N P    +  K I  F+DP T +KL F  P       F+
Sbjct: 223 KEVLHILQTHYPERLGKALLTNIPWLAWTFLKLIHPFIDPLTREKLVFDEP-------FV 275
Query: 63  KSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTAR 101
           K     E L + +GG    +Y+H+ +   +    V+TAR
Sbjct: 276 KYVPKNE-LDSLYGGDLKFKYNHDVYWPAL----VETAR 309

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	120
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	7e-29
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	3e-27
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	1e-18
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	2e-17
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	7e-16

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A* Length = 320

 Score =  105 bits (263), Expect = 7e-29
 Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
            I+D+  I QN+YPER+    + + P  F +++K ++ FLDP T  K+  +  + K+ L 
Sbjct: 205 YIKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSSYKKEL- 263

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDDVKTARFWGLDDQRPRK 112
                  +ENLP ++GG + L   +++F         +  R+ G + + P  
Sbjct: 264 --LKQIPIENLPVKYGGTSVLHNPNDKFYYSDIGPW-RDPRYIGPEGEIPNI 312

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1 Length = 296

 Score =  100 bits (251), Expect = 3e-27
 Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)

Query: 1   TIRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLA 60
            +R+  YI QN+YPER+    + N P  F + ++  + FLDP T  K+  +  + ++ L 
Sbjct: 190 YVREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKEL- 248

Query: 61  FMKSSFDVENLPTEFGGKATLQYDHE 86
                   ENLP +FGGK+ +     
Sbjct: 249 --LKQIPAENLPVKFGGKSEVDESKG 272

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A* Length = 316

 Score = 78.2 bits (193), Expect = 1e-18
 Identities = 16/95 (16%), Positives = 42/95 (44%), Gaps = 5/95 (5%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           +R ++ + Q+ +P         + P +F + +  ++ FL  +  +++ F++ ++      
Sbjct: 219 LRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERV-FVHGDDLSGF-- 275

Query: 62  MKSSFDVENLPTEFGGKATLQYDHEEFSRLMAQDD 96
                D   LP++FGG    +YD +  +  +    
Sbjct: 276 -YQEIDENILPSDFGGTLP-KYDGKAVAEQLFGPQ 308

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A* Length = 262

 Score = 74.3 bits (183), Expect = 2e-17
 Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
            + I  +  + +P ++    L N P  F +++  I+ FL  +  +++     N K+SL  
Sbjct: 160 AKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQ 219

Query: 62  MKSSFDVENLPTEFGGKA-TLQYDHEEFSRLMAQ 94
                  + LP E+GG+  +++   +E++  + +
Sbjct: 220 ----HFPDILPLEYGGEEFSMEDICQEWTNFIMK 249

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E* Length = 403

 Score = 70.8 bits (173), Expect = 7e-16
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
             + + +F+ +YPE L    +   PK F   +  I+ FL   T +K+  +  N KE L  
Sbjct: 171 YGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVL-- 228

Query: 62  MKSSFDVENLPTEFGGKAT 80
                  + +P E+GG  T
Sbjct: 229 -LKHISPDQVPVEYGGTMT 246

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	120
1r5l_A	262	Alpha-TTP, protein (alpha-tocopherol transfer prot	99.88
3hx3_A	316	Retinaldehyde-binding protein 1; lipid transfer pr	99.87
1aua_A	296	Phosphatidylinositol transfer protein SEC14P; phos	99.87
3q8g_A	320	CRAL-TRIO domain-containing protein YKL091C; strin	99.83
1olm_A	403	SEC14-like protein 2; lipid-binding protein, chole	99.83
3pg7_A	256	Neurofibromin; SEC lipid binding domain, PH domain	97.38
3peg_A	290	Neurofibromin; SEC14 domain, pleckstrin homology d	95.61

>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*

Probab=99.88  E-value=3.4e-23  Score=154.10  Aligned_cols=89  Identities=19%  Similarity=0.309  Sum_probs=79.3

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|++++++|++||+||+++||||+|++|+++|++++|||+++|++||++++++   +.++|.++|| ++||++|||+++.
T Consensus       160 ~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t~~Ki~~~~~~---~~~~L~~~i~-~~LP~~yGG~~~~  235 (262)
T 1r5l_A          160 AKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNN---YKQSLLQHFP-DILPLEYGGEEFS  235 (262)
T ss_dssp             HHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSS---CHHHHHHHST-TTSCGGGTCSSCC
T ss_pred             HHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHHHhheEEeCCC---cHHHHHHHhh-hhCcHhhCCCCCC
Confidence            68899999999999999999999999999999999999999999999998653   4789999999 9999999999987


Q ss_pred             CCCcHHHHHHHhH
Q 047851           82 QYDHEEFSRLMAQ   94 (120)
Q Consensus        82 ~~~~~~~~~~~~~   94 (120)
                      ..+....|....+
T Consensus       236 ~~~~~~~w~~~l~  248 (262)
T 1r5l_A          236 MEDICQEWTNFIM  248 (262)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            6666666655443

>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*

Probab=99.87  E-value=5.8e-23  Score=158.19  Aligned_cols=88  Identities=18%  Similarity=0.437  Sum_probs=81.4

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|++++++|++||+||+++||||+|++|.++|+++++||+++|++||.+++++    .++|.++||+++||++|||+++ 
T Consensus       219 ~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~KI~~~~~~----~~~L~~~I~~~~LP~eyGG~~~-  293 (316)
T 3hx3_A          219 LRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDD----LSGFYQEIDENILPSDFGGTLP-  293 (316)
T ss_dssp             HHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTTEEEEETC----CHHHHHHSCGGGSBGGGTSSBC-
T ss_pred             HHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhheEEeCCC----HHHHHhhCCHhhCcHhhCCCCC-
Confidence            68999999999999999999999999999999999999999999999998653    4789999999999999999998 


Q ss_pred             CCCcHHHHHHHhH
Q 047851           82 QYDHEEFSRLMAQ   94 (120)
Q Consensus        82 ~~~~~~~~~~~~~   94 (120)
                      .+++..|++.+..
T Consensus       294 ~~d~~~~~~~l~~  306 (316)
T 3hx3_A          294 KYDGKAVAEQLFG  306 (316)
T ss_dssp             CCCHHHHHHHHC-
T ss_pred             CcChhHHHHHHcC
Confidence            4899999988765

>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1

Probab=99.87  E-value=1.7e-22  Score=153.34  Aligned_cols=78  Identities=33%  Similarity=0.557  Sum_probs=73.6

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|++++++|++||+||+++||||+|++|.++|+++++||+++|++||+|++++   +.++|.++||+++||++|||++++
T Consensus       191 ~k~~~~~~q~~YPerl~~i~iiN~P~~f~~~~~iikpfl~~~t~~KI~~~~~~---~~~~L~~~i~~~~LP~~yGG~~~~  267 (296)
T 1aua_A          191 VREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSS---YQKELLKQIPAENLPVKFGGKSEV  267 (296)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSC---CHHHHTTTSCSSSSBGGGTSCBCC
T ss_pred             HHHHHHHHHHhHHHhhCeEEEECchHHHHHHHHHHHhhcCHhhcceEEEeCcc---cHHHHHhhCCHhhCcHHhCCCCCC
Confidence            57889999999999999999999999999999999999999999999999764   478899999999999999999987


Q ss_pred             C
Q 047851           82 Q   82 (120)
Q Consensus        82 ~   82 (120)
                      .
T Consensus       268 ~  268 (296)
T 1aua_A          268 D  268 (296)
T ss_dssp             C
T ss_pred             C
Confidence            5

>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*

Probab=99.83  E-value=1.2e-21  Score=151.34  Aligned_cols=78  Identities=32%  Similarity=0.554  Sum_probs=73.5

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|++++++|++||+||+++||||+|++|.++|+++++||+++|++||.|++++   +.++|.++||+++||++|||++++
T Consensus       206 ~k~~~~~lq~~YPerl~~i~iiN~P~~f~~~~~~ikpfl~~~t~~KI~~~~~~---~~~~L~~~i~~~~LP~~yGG~~~~  282 (320)
T 3q8g_A          206 IKDVADISQNYYPERMGKFYIIHSPFGFSTMFKMVKPFLDPVTVSKIFILGSS---YKKELLKQIPIENLPVKYGGTSVL  282 (320)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHTTTGGGSCHHHHHTEEECCTT---HHHHHHHHSCGGGSBGGGTSCBCC
T ss_pred             HHHHHHHHHhhCchhhceEEEECCCHHHHHHHHHHHHhCCHHHhhhEEEeCCC---cHHHHHhhCChhhCChhhCCCCCC
Confidence            57899999999999999999999999999999999999999999999999754   468999999999999999999997


Q ss_pred             C
Q 047851           82 Q   82 (120)
Q Consensus        82 ~   82 (120)
                      .
T Consensus       283 ~  283 (320)
T 3q8g_A          283 H  283 (320)
T ss_dssp             S
T ss_pred             C
Confidence            4

>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*

Probab=99.83  E-value=3.3e-21  Score=151.97  Aligned_cols=86  Identities=23%  Similarity=0.442  Sum_probs=77.2

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|++++++|++||+||+++||||+|++|.++|++++|||+++|++||+|++++   +.++|.++||+++||++|||++++
T Consensus       171 ~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ikpfl~~~t~~KI~~~~~~---~~~~L~~~I~~~~LP~~yGG~~~~  247 (403)
T 1olm_A          171 YGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGAN---WKEVLLKHISPDQVPVEYGGTMTD  247 (403)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTT---HHHHHTTTSCGGGSBGGGTSSBCC
T ss_pred             HHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHHHHhhcCHhhhceEEEEChh---HHHHHHhhcChhhCchhhCCCcCC
Confidence            58999999999999999999999999999999999999999999999999652   578999999999999999999997


Q ss_pred             CCCcHHHHHH
Q 047851           82 QYDHEEFSRL   91 (120)
Q Consensus        82 ~~~~~~~~~~   91 (120)
                      . +++.+|..
T Consensus       248 ~-~~~~~c~~  256 (403)
T 1olm_A          248 P-DGNPKCKS  256 (403)
T ss_dssp             T-TCCTTCTT
T ss_pred             C-CCCccccc
Confidence            3 55444443

>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*

Probab=97.38  E-value=4.7e-05  Score=56.88  Aligned_cols=65  Identities=14%  Similarity=0.197  Sum_probs=53.1

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHH-HHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKA-IRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENL   71 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~i-vk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~L   71 (120)
                      ++++..++...|...++++|++|++++++..+.. .+++.+.+..+|+.++++     ..+|.++|+.++|
T Consensus        79 l~~~~~llp~~~~kNlk~~Yivnpt~~~k~~~~~~~~~~~~~k~~~Ki~fv~s-----l~eL~~~i~~~~L  144 (256)
T 3pg7_A           79 LSKWFVVFPGFAYDNVSAVYIYNCNSWVREYTKYHERLLTGLKGSKRLVFIDC-----PGKLAEHIEHEQQ  144 (256)
T ss_dssp             HHHTTTSSCHHHHHTEEEEEEESCCHHHHHHHHHTHHHHTTTTTCTTEEEESS-----TTGGGGTSCGGGC
T ss_pred             HHHHHHHcCHHHHhcccEEEEECCCHHHHHHHHHHhccccccccCCcEEEECC-----HHHHHhhcCHHHc
Confidence            3556667788899999999999999999977665 467777789999999964     6889999976654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	120
d1olma3	199	c.13.1.1 (A:76-274) Supernatant protein factor (SP	5e-16
d1r5la2	185	c.13.1.1 (A:91-275) Alpha-tocopherol transfer prot	5e-16
d1auaa2	203	c.13.1.1 (A:97-299) C-terminal domain of phosphati	9e-16

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]} Length = 199

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 5e-16
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
             + + +F+ +YPE L    +   PK F   +  I+ FL   T +K+  +  N KE L  
Sbjct: 96  YGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGANWKEVLL- 154

Query: 62  MKSSFDVENLPTEFGGKAT 80
                  + +P E+GG  T
Sbjct: 155 --KHISPDQVPVEYGGTMT 171

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.1 bits (166), Expect = 5e-16
 Identities = 19/94 (20%), Positives = 45/94 (47%), Gaps = 5/94 (5%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
            + I  +  + +P ++    L N P  F +++  I+ FL  +  +++     N K+SL  
Sbjct: 86  AKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNNYKQSLLQ 145

Query: 62  MKSSFDVENLPTEFGGKA-TLQYDHEEFSRLMAQ 94
                  + LP E+GG+  +++   +E++  + +
Sbjct: 146 ----HFPDILPLEYGGEEFSMEDICQEWTNFIMK 175

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 203

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.5 bits (164), Expect = 9e-16
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 2   IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAF 61
           +R+  YI QN+YPER+    + N P  F + ++  + FLDP T  K+  +  + ++ L  
Sbjct: 98  VREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSSYQKELL- 156

Query: 62  MKSSFDVENLPTEFGGKATLQYD 84
                  ENLP +FGGK+ +   
Sbjct: 157 --KQIPAENLPVKFGGKSEVDES 177

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	120
d1olma3	199	Supernatant protein factor (SPF), middle domain {H	99.89
d1auaa2	203	C-terminal domain of phosphatidylinositol transfer	99.87
d1r5la2	185	Alpha-tocopherol transfer protein {Human (Homo sap	99.86

>d1olma3 c.13.1.1 (A:76-274) Supernatant protein factor (SPF), middle domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Supernatant protein factor (SPF), middle domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=7.2e-25  Score=156.96  Aligned_cols=78  Identities=24%  Similarity=0.482  Sum_probs=73.4

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|++++++|++||+|++++||||+|++|+++|+++++||+++|++||.+++++   +.+.|.++|++++||++|||+|.+
T Consensus        96 l~~~~~~~q~~YPerl~~i~iiN~P~~f~~~w~ivk~fl~~~t~~KI~~~~~~---~~~~L~~~i~~~~lP~~yGGt~~~  172 (199)
T d1olma3          96 YGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNLIKPFLSEDTRKKIMVLGAN---WKEVLLKHISPDQVPVEYGGTMTD  172 (199)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHHHGGGSCHHHHHTEEECCTT---HHHHHTTTSCGGGSBGGGTSSBCC
T ss_pred             HHHHHHHHHHHHHHhhhheEEECCCHHHHHHHHHHHHhcCHHhhccEEEeCCC---CHHHHHHhCCHhhCCHHhCCCCCC
Confidence            67899999999999999999999999999999999999999999999999754   478899999999999999999986


Q ss_pred             C
Q 047851           82 Q   82 (120)
Q Consensus        82 ~   82 (120)
                      .
T Consensus       173 ~  173 (199)
T d1olma3         173 P  173 (199)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1auaa2 c.13.1.1 (A:97-299) C-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: C-terminal domain of phosphatidylinositol transfer protein sec14p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=6.1e-23  Score=146.68  Aligned_cols=102  Identities=28%  Similarity=0.502  Sum_probs=84.6

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|++++++|++||+++++++|||+|++|+++|+++++||+++|++||++++++   +.+.|.++||+++||++|||+|.|
T Consensus        98 ~k~~~~~~q~~yPe~l~~i~ivN~P~~~~~~~~~vk~fl~~~t~~KI~~~~~~---~~~~L~~~id~~~LP~~~GG~~~~  174 (203)
T d1auaa2          98 VREASYISQNYYPERMGKFYIINAPFGFSTAFRLFKPFLDPVTVSKIFILGSS---YQKELLKQIPAENLPVKFGGKSEV  174 (203)
T ss_dssp             HHHHHHHHHHHSTTCEEEEEEESCCHHHHHHHHHHGGGSCHHHHTTEEECCSC---CHHHHTTTSCSSSSBGGGTSCBCC
T ss_pred             HHHHHHHHHHhChHhhcceEEECCcHHHHHHHHHHHhhcCHHHhhceeecCCC---CHHHHHhhCCHhhChHHhCCCCcC
Confidence            57899999999999999999999999999999999999999999999999764   478999999999999999999997


Q ss_pred             CCCcHHHHHHHhHhh---HHHhhhhccCCCCC
Q 047851           82 QYDHEEFSRLMAQDD---VKTARFWGLDDQRP  110 (120)
Q Consensus        82 ~~~~~~~~~~~~~~d---~~~~~~~~~~~~~~  110 (120)
                      ..+...    +...|   .+..++|+..++.|
T Consensus       175 ~~~~g~----~~~~~~~~~~~p~~~~~~~~~p  202 (203)
T d1auaa2         175 DESKGG----LYLSDIGPWRDPKYIGPEGEAP  202 (203)
T ss_dssp             CGGGCC----STTCCCSGGGCGGGCCTTCCCC
T ss_pred             CCCCCC----ccccCCCCCCChhhcCCCCCCc
Confidence            533211    22222   25566777766544

>d1r5la2 c.13.1.1 (A:91-275) Alpha-tocopherol transfer protein {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: SpoIIaa-like
superfamily: CRAL/TRIO domain
family: CRAL/TRIO domain
domain: Alpha-tocopherol transfer protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.1e-22  Score=143.70  Aligned_cols=92  Identities=18%  Similarity=0.331  Sum_probs=77.9

Q ss_pred             HHHHHHHHhhhhHHhhchheEEcCchHHHHHHHHHHHhcCHhhhcceeEECCCChhhHHHHhccCCCCCCCcccCCCcCC
Q 047851            2 IRDIIYIFQNHYPERLAISILYNPPKFFESIWKAIRYFLDPRTTQKLKFIYPNNKESLAFMKSSFDVENLPTEFGGKATL   81 (120)
Q Consensus         2 ~k~i~~~l~~~yP~rl~~i~iin~P~~~~~~~~ivk~~l~~~t~~Ki~~~~~~~~~~~~~L~~~i~~~~LP~~~GG~~~~   81 (120)
                      +|++++++|++||+|++++||||+|++++++|+++++||++++++||.+++++    .+++..++++++||++|||+++.
T Consensus        86 ~~~~~~~~q~~yP~rl~~i~ivn~P~~~~~~~~~vk~fl~~k~~~Ki~~~~~~----~~~~~~~~~~~~LP~~~GG~~~~  161 (185)
T d1r5la2          86 AKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIHMHGNN----YKQSLLQHFPDILPLEYGGEEFS  161 (185)
T ss_dssp             HHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHHHTTEEECCSS----CHHHHHHHSTTTSCGGGTCSSCC
T ss_pred             HHHHHHHHHhhCchhhheeEEEcCCHHHHHHHHHHHHhccHHHHhheEEeccc----hHHHHhhcCHHhCCHhcCCCCCC
Confidence            57899999999999999999999999999999999999999999999999754    35666778899999999999986


Q ss_pred             CCCcH-HHHHHHhHhhH
Q 047851           82 QYDHE-EFSRLMAQDDV   97 (120)
Q Consensus        82 ~~~~~-~~~~~~~~~d~   97 (120)
                      ..+.. .|.+.+.+.++
T Consensus       162 ~~~~~~~~~~~~~~~~d  178 (185)
T d1r5la2         162 MEDICQEWTNFIMKSED  178 (185)
T ss_dssp             HHHHHHHHHHHHHHTHH
T ss_pred             hHHHHHHHHHHHHHHHH
Confidence            54544 44455555544