Citrus Sinensis ID: 047862
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 769 | 2.2.26 [Sep-21-2011] | |||||||
| Q94KD8 | 768 | Probable beta-D-xylosidas | yes | no | 0.949 | 0.950 | 0.501 | 0.0 | |
| Q9LJN4 | 781 | Probable beta-D-xylosidas | no | no | 0.938 | 0.924 | 0.513 | 0.0 | |
| A5JTQ3 | 774 | Beta-xylosidase/alpha-L-a | N/A | no | 0.947 | 0.941 | 0.491 | 0.0 | |
| A5JTQ2 | 774 | Beta-xylosidase/alpha-L-a | N/A | no | 0.950 | 0.944 | 0.495 | 0.0 | |
| Q9FGY1 | 774 | Beta-D-xylosidase 1 OS=Ar | no | no | 0.940 | 0.934 | 0.501 | 0.0 | |
| Q9FLG1 | 784 | Beta-D-xylosidase 4 OS=Ar | no | no | 0.942 | 0.924 | 0.497 | 0.0 | |
| Q9LXD6 | 773 | Beta-D-xylosidase 3 OS=Ar | no | no | 0.938 | 0.934 | 0.488 | 0.0 | |
| Q9SGZ5 | 767 | Probable beta-D-xylosidas | no | no | 0.949 | 0.951 | 0.459 | 0.0 | |
| Q9LXA8 | 792 | Probable beta-D-xylosidas | no | no | 0.950 | 0.922 | 0.448 | 0.0 | |
| Q0CB82 | 765 | Probable exo-1,4-beta-xyl | N/A | no | 0.875 | 0.879 | 0.411 | 1e-140 |
| >sp|Q94KD8|BXL2_ARATH Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1 | Back alignment and function desciption |
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Score = 780 bits (2013), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/767 (50%), Positives = 512/767 (66%), Gaps = 37/767 (4%)
Query: 7 TYVCDPARFAELKLKLSDFAFCDAKLPYPVRAKDLVDRMTLAEKVQQLGDLAYGVPRLGL 66
T+ CD A L+ FC +P P R +DL+ R+TLAEKV LG+ A +PRLG+
Sbjct: 29 TFACDTKDAATATLR-----FCQLSVPIPERVRDLIGRLTLAEKVSLLGNTAAAIPRLGI 83
Query: 67 PLYEWWSEALHGVSYIGRRTNTPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTV 126
YEWWSEALHGVS +G PGT F P ATSFP VI T ASFN SLW+ IG+ V
Sbjct: 84 KGYEWWSEALHGVSNVG------PGTKFGGVYPAATSFPQVITTVASFNASLWESIGRVV 137
Query: 127 STEARAMHNLGNAGLTFWSPNINVVRDPRWGRVMETPGEDPFVVGRYSVNYVRGLQDVEG 186
S EARAM+N G GLT+WSPN+N++RDPRWGR ETPGEDP V G+Y+ +YVRGLQ G
Sbjct: 138 SNEARAMYNGGVGGLTYWSPNVNILRDPRWGRGQETPGEDPVVAGKYAASYVRGLQ---G 194
Query: 187 QENTADLSTRPLKVSACCKHYAAYDLDNWKGVDRFHFDSKVTEQDMIETFNLPFEMCVRE 246
+ + LKV+ACCKH+ AYDLDNW GVDRFHF++KV++QD+ +TF++PF MCV+E
Sbjct: 195 NDRSR------LKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVKE 248
Query: 247 GDASSVMCSYNRVNGIPTCADSKLLNQTIRGDWNLHGYIVSDCDSIQTIVESHKFLNDTK 306
G+ +S+MCSYN+VNG+PTCAD LL +TIR W L+GYIVSDCDS+ + ++ + T
Sbjct: 249 GNVASIMCSYNQVNGVPTCADPNLLKKTIRNQWGLNGYIVSDCDSVGVLYDTQHY-TGTP 307
Query: 307 EEAVARVLKAGLDLDCGDYYTNFTVGAVQQGKVRETDIDRSLRFLYVVLMRLGYFDG--- 363
EEA A +KAGLDLDCG + T+ AV++ +RE+D+D +L V MRLG FDG
Sbjct: 308 EEAAADSIKAGLDLDCGPFLGAHTIDAVKKNLLRESDVDNALINTLTVQMRLGMFDGDIA 367
Query: 364 SPQYKSLGKNDICNPQHIELAGEAAAQGIVLLKNDNGTLPFHNATIKTLAVVGPHANATK 423
+ Y LG +C P H LA EAA QGIVLLKN +LP + +T+AV+GP+++AT
Sbjct: 368 AQPYGHLGPAHVCTPVHKGLALEAAQQGIVLLKNHGSSLPLSSQRHRTVAVIGPNSDATV 427
Query: 424 AMIGNYEGIPCRYISPMTGLSTYGNVNYAFGCADIACKNDSMISQATDAAKNADATIIVT 483
MIGNY G+ C Y SP+ G++ Y + GC D+ C +D + A +AA+ ADAT++V
Sbjct: 428 TMIGNYAGVACGYTSPVQGITGYARTIHQKGCVDVHCMDDRLFDAAVEAARGADATVLVM 487
Query: 484 GLDLSIEAEALDRNDLYLPGFQTQLINQVADAAKGPVILVLMCAGGVDISFAKNNPKIKS 543
GLD SIEAE DRN L LPG Q +L+++VA AAKGPVILVLM G +DISFA+ + KI +
Sbjct: 488 GLDQSIEAEFKDRNSLLLPGKQQELVSRVAKAAKGPVILVLMSGGPIDISFAEKDRKIPA 547
Query: 544 ILWAGYPGEEGGRAIADIVFGKYNPGGKLPLTWYEGNYVDKIPFTSMPLRSV--DKLPGR 601
I+WAGYPG+EGG AIADI+FG NPGGKLP+TWY +Y+ +P T M +R V ++PGR
Sbjct: 548 IVWAGYPGQEGGTAIADILFGSANPGGKLPMTWYPQDYLTNLPMTEMSMRPVHSKRIPGR 607
Query: 602 TYKFFDGPVVYPFGYGLSYTLFKYNLAFSNKSIDVKLDKFQVCRDLNYTNGATKPQCPAV 661
TY+F+DGPVVYPFG+GLSYT F +N+A + K I + + R N T ++
Sbjct: 608 TYRFYDGPVVYPFGHGLSYTRFTHNIADAPKVIPIAV------RGRNGTVSGK-----SI 656
Query: 662 QTADLKCNDNYFTFEIEVQNVGKVDGSEVVMVYSKLPGIAGTPIKQLIGFQRVYVAAGQS 721
+ +C+ +EV NVG DG+ ++V+S PG P KQL+ F+RV+VA G+
Sbjct: 657 RVTHARCDRLSLGVHVEVTNVGSRDGTHTMLVFSAPPGGEWAPKKQLVAFERVHVAVGEK 716
Query: 722 AKVNFTLNVCDSLRIIDFAANSILAAGAHTILLGDGAVSFPLQVNLI 768
+V ++VC L ++D A N + G H I +GD + + LQ + +
Sbjct: 717 KRVQVNIHVCKYLSVVDRAGNRRIPIGDHGIHIGDESHTVSLQASTL 763
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May be involved in remodeling of xylans during vascular development. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: - |
| >sp|Q9LJN4|BXL5_ARATH Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2 | Back alignment and function description |
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| >sp|A5JTQ3|XYL2_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia GN=Xyl2 PE=2 SV=1 | Back alignment and function description |
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| >sp|A5JTQ2|XYL1_MEDSV Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia GN=Xyl1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FGY1|BXL1_ARATH Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FLG1|BXL4_ARATH Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9LXD6|BXL3_ARATH Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9SGZ5|BXL7_ARATH Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9LXA8|BXL6_ARATH Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q0CB82|BXLB_ASPTN Probable exo-1,4-beta-xylosidase bxlB OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=bxlB PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 769 | ||||||
| 255557375 | 802 | Beta-glucosidase, putative [Ricinus comm | 0.983 | 0.942 | 0.693 | 0.0 | |
| 449433577 | 812 | PREDICTED: probable beta-D-xylosidase 2- | 0.988 | 0.935 | 0.651 | 0.0 | |
| 225432136 | 809 | PREDICTED: probable beta-D-xylosidase 5- | 0.986 | 0.938 | 0.633 | 0.0 | |
| 225432134 | 805 | PREDICTED: probable beta-D-xylosidase 5- | 0.977 | 0.934 | 0.630 | 0.0 | |
| 224093292 | 694 | predicted protein [Populus trichocarpa] | 0.895 | 0.992 | 0.659 | 0.0 | |
| 225432132 | 805 | PREDICTED: beta-xylosidase/alpha-L-arabi | 0.984 | 0.940 | 0.613 | 0.0 | |
| 297736787 | 774 | unnamed protein product [Vitis vinifera] | 0.937 | 0.931 | 0.614 | 0.0 | |
| 297736788 | 746 | unnamed protein product [Vitis vinifera] | 0.905 | 0.932 | 0.587 | 0.0 | |
| 359477633 | 781 | PREDICTED: LOW QUALITY PROTEIN: beta-D-x | 0.977 | 0.962 | 0.602 | 0.0 | |
| 297736786 | 745 | unnamed protein product [Vitis vinifera] | 0.906 | 0.935 | 0.579 | 0.0 |
| >gi|255557375|ref|XP_002519718.1| Beta-glucosidase, putative [Ricinus communis] gi|223541135|gb|EEF42691.1| Beta-glucosidase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/769 (69%), Positives = 625/769 (81%), Gaps = 13/769 (1%)
Query: 1 PDNKTFTYVCDPARFAELKLKLSDFAFCDAKLPYPVRAKDLVDRMTLAEKVQQLGDLAYG 60
P +FTYVCD +R+ L L ++ F FCD+ L Y VRAKDLV++MTL EKVQQLGDLAYG
Sbjct: 42 PRGSSFTYVCDSSRYDNLGLDMTTFGFCDSSLSYEVRAKDLVNQMTLKEKVQQLGDLAYG 101
Query: 61 VPRLGLPLYEWWSEALHGVSYIGRRTNTPPGTHFDSEVPGATSFPTVILTTASFNESLWK 120
VPRLG+P YEWWSEALHGVS +G PGT FD VPGATSFPT ILTTASFNESLWK
Sbjct: 102 VPRLGIPKYEWWSEALHGVSDVG------PGTFFDDLVPGATSFPTTILTTASFNESLWK 155
Query: 121 KIGQTVSTEARAMHNLGNAGLTFWSPNINVVRDPRWGRVMETPGEDPFVVGRYSVNYVRG 180
IGQ S +ARAM+NLG AGLT+WSPN+NVVRDPRWGR +ETPGEDP+VVGRY+VNYVRG
Sbjct: 156 NIGQA-SAKARAMYNLGRAGLTYWSPNVNVVRDPRWGRTVETPGEDPYVVGRYAVNYVRG 214
Query: 181 LQDVEGQENTADLSTRPLKVSACCKHYAAYDLDNWKGVDRFHFDSKVTEQDMIETFNLPF 240
LQDVEG EN DL+TRPLKVS+CCKHYAAYD++ W+GV+R FD++VTEQDM+ETF PF
Sbjct: 215 LQDVEGTENYTDLNTRPLKVSSCCKHYAAYDVEKWQGVERLTFDARVTEQDMVETFLRPF 274
Query: 241 EMCVREGDASSVMCSYNRVNGIPTCADSKLLNQTIRGDWNLHGYIVSDCDSIQTIVESHK 300
EMCV+EGD SSVMCS+NRVNGIPTCAD KLLNQTIRGDW+LHGYIVSDCDSI+ +V++HK
Sbjct: 275 EMCVKEGDVSSVMCSFNRVNGIPTCADPKLLNQTIRGDWDLHGYIVSDCDSIEVMVDNHK 334
Query: 301 FLNDTKEEAVARVLKAGLDLDCGDYYTNFTVGAVQQGKVRETDIDRSLRFLYVVLMRLGY 360
FL DT E+AVA+VLKAGLDLDCG YYTNFT +V+QGK RE IDRSL++LYVVLMRLG+
Sbjct: 335 FLGDTNEDAVAQVLKAGLDLDCGGYYTNFTETSVKQGKAREEYIDRSLKYLYVVLMRLGF 394
Query: 361 FDGSPQYKSLGKNDICNPQHIELAGEAAAQGIVLLKNDNGTLPFHNATIKTLAVVGPHAN 420
FDG+PQY+ LGK DIC +++ELA +AA +GIVLLKN N TLP +K LAVVGPHAN
Sbjct: 395 FDGTPQYQKLGKKDICTKENVELAKQAAREGIVLLKN-NDTLPLSMDKVKNLAVVGPHAN 453
Query: 421 ATKAMIGNYEGIPCRYISPMTGLSTYGNVNYAFGCADIACKNDSMISQATDAAKNADATI 480
AT+ MIGNY G+PCRY+SP+ G S Y NV Y GC D+ CKN+S++ A AAKNADATI
Sbjct: 454 ATRVMIGNYAGVPCRYVSPIDGFSIYSNVTYEIGC-DVPCKNESLVFPAVHAAKNADATI 512
Query: 481 IVTGLDLSIEAEALDRNDLYLPGFQTQLINQVADAAKGPVILVLMCAGGVDISFAKNNPK 540
IV GLDL+IEAE LDRNDL LPG+QTQLINQVA AA GPVILV+M AGGVDISFA++N K
Sbjct: 513 IVAGLDLTIEAEGLDRNDLLLPGYQTQLINQVAGAANGPVILVIMAAGGVDISFARDNEK 572
Query: 541 IKSILWAGYPGEEGGRAIADIVFGKYNPGGKLPLTWYEGNYVDKIPFTSMPLRSVDKL-- 598
IK+ILW GYPG+EGG AIAD+VFGKYNPGG+LP+TWYE ++V+++P T M LR ++L
Sbjct: 573 IKAILWVGYPGQEGGHAIADVVFGKYNPGGRLPITWYEADFVEQVPMTYMQLRPDEELGY 632
Query: 599 PGRTYKFFDGPVVYPFGYGLSYTLFKYNLAFSNKSIDVKLDKFQVCRDLNYTNGATKPQC 658
PG+TYKF+DG VYPFGYGLSYT F YN+ + +S + L+KFQ CRDL Y N KP C
Sbjct: 633 PGKTYKFYDGSTVYPFGYGLSYTTFSYNITSAKRSKHIALNKFQHCRDLRYGNETFKPSC 692
Query: 659 PAVQTADLKCNDNYFTFEIEVQNVGKVDGSEVVMVYSKLP-GIAGTPIKQLIGFQRVYVA 717
PAV T L CND+ F E+EV+N G DGSEVVMVYSK P GI G+ IKQ+IGF+RV+V
Sbjct: 693 PAVLTDHLPCNDD-FELEVEVENTGSRDGSEVVMVYSKTPEGIVGSYIKQVIGFKRVFVQ 751
Query: 718 AGQSAKVNFTLNVCDSLRIIDFAANSILAAGAHTILLGDGAVSFPLQVN 766
AG KVNF NVC S RIID+ A SIL +G HTI++GD VS PL +N
Sbjct: 752 AGSVEKVNFRFNVCKSFRIIDYNAYSILPSGGHTIMVGDDIVSIPLYIN 800
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449433577|ref|XP_004134574.1| PREDICTED: probable beta-D-xylosidase 2-like [Cucumis sativus] gi|449530107|ref|XP_004172038.1| PREDICTED: probable beta-D-xylosidase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|225432136|ref|XP_002274651.1| PREDICTED: probable beta-D-xylosidase 5-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225432134|ref|XP_002274619.1| PREDICTED: probable beta-D-xylosidase 5-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224093292|ref|XP_002309869.1| predicted protein [Populus trichocarpa] gi|222852772|gb|EEE90319.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|225432132|ref|XP_002274591.1| PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 1-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297736787|emb|CBI25988.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297736788|emb|CBI25989.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359477633|ref|XP_003632006.1| PREDICTED: LOW QUALITY PROTEIN: beta-D-xylosidase 3-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297736786|emb|CBI25987.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 769 | ||||||
| TAIR|locus:2091236 | 781 | AT3G19620 [Arabidopsis thalian | 0.938 | 0.924 | 0.515 | 6.2e-204 | |
| TAIR|locus:2196060 | 768 | BXL2 "beta-xylosidase 2" [Arab | 0.929 | 0.930 | 0.507 | 3.1e-202 | |
| TAIR|locus:2157994 | 774 | BXL1 "beta-xylosidase 1" [Arab | 0.921 | 0.916 | 0.510 | 2.6e-198 | |
| TAIR|locus:2174809 | 784 | XYL4 "beta-D-xylosidase 4" [Ar | 0.954 | 0.936 | 0.498 | 1e-196 | |
| TAIR|locus:2144756 | 773 | BXL3 "AT5G09730" [Arabidopsis | 0.938 | 0.934 | 0.489 | 2.5e-191 | |
| TAIR|locus:2029391 | 767 | AT1G78060 [Arabidopsis thalian | 0.947 | 0.950 | 0.465 | 4.3e-180 | |
| TAIR|locus:2142434 | 792 | AT5G10560 [Arabidopsis thalian | 0.938 | 0.911 | 0.455 | 1.6e-173 | |
| ASPGD|ASPL0000029139 | 763 | bxlB [Emericella nidulans (tax | 0.762 | 0.768 | 0.403 | 5.1e-121 | |
| UNIPROTKB|Q5ATH9 | 763 | bxlB "Exo-1,4-beta-xylosidase | 0.762 | 0.768 | 0.403 | 5.1e-121 | |
| ASPGD|ASPL0000048081 | 803 | xlnD [Emericella nidulans (tax | 0.747 | 0.716 | 0.400 | 2.1e-107 |
| TAIR|locus:2091236 AT3G19620 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1973 (699.6 bits), Expect = 6.2e-204, P = 6.2e-204
Identities = 394/764 (51%), Positives = 506/764 (66%)
Query: 8 YVCDPARFAELKLKLSDFAFCDAKLPYPVRAKDLVDRMTLAEKVQQLGDLAYGVPRLGLP 67
+ CD + A K + FC+ L Y RAKDLV R++L EKVQQL + A GVPRLG+P
Sbjct: 27 FACDISAPATAK-----YGFCNVSLSYEARAKDLVSRLSLKEKVQQLVNKATGVPRLGVP 81
Query: 68 LYEWWSEALHGVSYIGRRTNTPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTVS 127
YEWWSEALHGVS +G PG HF+ VPGATSFP ILT ASFN SLW K+G+ VS
Sbjct: 82 PYEWWSEALHGVSDVG------PGVHFNGTVPGATSFPATILTAASFNTSLWLKMGEVVS 135
Query: 128 TEARAMHNLGNAGLTFWSPNINVVRDPRWGRVMETPGEDPFVVGRYSVNYVRGLQDVEGQ 187
TEARAMHN+G AGLT+WSPN+NV RDPRWGR ETPGEDP VV +Y+VNYV+GLQDV
Sbjct: 136 TEARAMHNVGLAGLTYWSPNVNVFRDPRWGRGQETPGEDPLVVSKYAVNYVKGLQDV--- 192
Query: 188 ENTADLSTRPLKVSACCKHYAAYDLDNWKGVDRFHFDSKVTEQDMIETFNLPFEMCVREG 247
+ A S R LKVS+CCKHY AYDLDNWKG+DRFHFD+KVT+QD+ +T+ PF+ CV EG
Sbjct: 193 -HDAGKSRR-LKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQTPFKSCVEEG 250
Query: 248 DASSVMCSYNRVNGIPTCADSKLLNQTIRGDWNLHGYIVSDCDSIQTIVESHKFLNDTKE 307
D SSVMCSYNRVNGIPTCAD LL IRG W L GYIVSDCDSIQ + T+E
Sbjct: 251 DVSSVMCSYNRVNGIPTCADPNLLRGVIRGQWRLDGYIVSDCDSIQVYFNDIHYTK-TRE 309
Query: 308 EAVARVLKAGLDLDCGDYYTNFTVGAVQQGKVRETDIDRSLRFLYVVLMRLGYFDGSPQ- 366
+AVA LKAGL+++CGD+ +T AV+ K+ +D+D +L + Y+VLMRLG+FDG P+
Sbjct: 310 DAVALALKAGLNMNCGDFLGKYTENAVKLKKLNGSDVDEALIYNYIVLMRLGFFDGDPKS 369
Query: 367 --YKSLGKNDICNPQHIELAGEAAAQGIVLLKNDNGTLPFHNATIKTLAVVGPHANATKA 424
+ +LG +D+C+ H LA EAA QGIVLL+N G LP T+K LAV+GP+ANATK
Sbjct: 370 LPFGNLGPSDVCSKDHQMLALEAAKQGIVLLEN-RGDLPLPKTTVKKLAVIGPNANATKV 428
Query: 425 MIGNYEGIPCRYISPMTGLSTY--GNVNYAFGCADIACKNDSMISQATDAAKNADATIIV 482
MI NY G+PC+Y SP+ GL Y + Y GC D+ C + ++IS A A AD T++V
Sbjct: 429 MISNYAGVPCKYTSPIQGLQKYVPEKIVYEPGCKDVKCGDQTLISAAVKAVSEADVTVLV 488
Query: 483 TGLDLSIEAEALDRNDLYLPGFQTQLINQVADAAKGPVILVLMCAGGVDISFAKNNPKIK 542
GLD ++EAE LDR +L LPG+Q +L+ VA+AAK V+LV+M AG +DISFAKN I+
Sbjct: 489 VGLDQTVEAEGLDRVNLTLPGYQEKLVRDVANAAKKTVVLVIMSAGPIDISFAKNLSTIR 548
Query: 543 SILWAGYPGEEGGRAIADIVFGKYNPGGKLPLTWYEGNYVDKIPFTSMPLR--SVDKLPG 600
++LW GYPGE GG AIA ++FG YNP G+LP TWY + DK+ T M +R S PG
Sbjct: 549 AVLWVGYPGEAGGDAIAQVIFGDYNPSGRLPETWYPQEFADKVAMTDMNMRPNSTSGFPG 608
Query: 601 RTYKFFDGPVVYPFGYGLSYTLFKYNLAFSNKSIDVKLDKFQVCRDLNYTNGATKPQCPA 660
R+Y+F+ G +Y FGYGLSY+ F + + I +K + +LN T +
Sbjct: 609 RSYRFYTGKPIYKFGYGLSYSSFSTFVLSAPSIIHIKTNPIM---NLNKTT--------S 657
Query: 661 VQTADLKCNDNYFTFEIEVQNVGKVDGSEVVMVYSKLPGIA------GTPIKQLIGFQRV 714
V + + C+D I V+N G GS VV+V+ K P + G P+ QL+GF+RV
Sbjct: 658 VDISTVNCHDLKIRIVIGVKNHGLRSGSHVVLVFWKPPKCSKSLVGGGVPLTQLVGFERV 717
Query: 715 YVAAGQSAKVNFTLNVCDSLRIIDFAANSILAAGAHTILLGDGA 758
V + K +VC +L ++D L G H +++G +
Sbjct: 718 EVGRSMTEKFTVDFDVCKALSLVDTHGKRKLVTGHHKLVIGSNS 761
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| TAIR|locus:2196060 BXL2 "beta-xylosidase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2157994 BXL1 "beta-xylosidase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2174809 XYL4 "beta-D-xylosidase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2144756 BXL3 "AT5G09730" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2029391 AT1G78060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2142434 AT5G10560 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000029139 bxlB [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q5ATH9 bxlB "Exo-1,4-beta-xylosidase bxlB" [Aspergillus nidulans FGSC A4 (taxid:227321)] | Back alignment and assigned GO terms |
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| ASPGD|ASPL0000048081 xlnD [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q4WFI6 | BXLB_ASPFU | 3, ., 2, ., 1, ., 3, 7 | 0.4077 | 0.9102 | 0.9079 | yes | no |
| A2QA27 | XYND_ASPNC | 3, ., 2, ., 1, ., 3, 7 | 0.3692 | 0.8842 | 0.8457 | yes | no |
| Q5ATH9 | BXLB_EMENI | 3, ., 2, ., 1, ., 3, 7 | 0.3686 | 0.8933 | 0.9003 | yes | no |
| O00089 | XYND_ASPNG | 3, ., 2, ., 1, ., 3, 7 | 0.3692 | 0.8842 | 0.8457 | yes | no |
| Q94KD8 | BXL2_ARATH | 3, ., 2, ., 1, ., - | 0.5019 | 0.9492 | 0.9505 | yes | no |
| Q2TYT2 | BXLB_ASPOR | 3, ., 2, ., 1, ., 3, 7 | 0.4002 | 0.8816 | 0.8506 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.2.1.37 | 0.914 |
| 3rd Layer | 3.2.1 | 0.921 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 769 | |||
| PLN03080 | 779 | PLN03080, PLN03080, Probable beta-xylosidase; Prov | 0.0 | |
| PRK15098 | 765 | PRK15098, PRK15098, beta-D-glucoside glucohydrolas | 4e-80 | |
| pfam01915 | 221 | pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase fam | 8e-63 | |
| pfam00933 | 296 | pfam00933, Glyco_hydro_3, Glycosyl hydrolase famil | 9e-58 | |
| COG1472 | 397 | COG1472, BglX, Beta-glucosidase-related glycosidas | 5e-54 | |
| pfam14310 | 71 | pfam14310, Fn3-like, Fibronectin type III-like dom | 5e-14 |
| >gnl|CDD|178629 PLN03080, PLN03080, Probable beta-xylosidase; Provisional | Back alignment and domain information |
|---|
Score = 794 bits (2053), Expect = 0.0
Identities = 359/749 (47%), Positives = 477/749 (63%), Gaps = 31/749 (4%)
Query: 23 SDFAFCDAKLPYPVRAKDLVDRMTLAEKVQQLGDLAYGVPRLGLPLYEWWSEALHGVSYI 82
S + FC+A LP P RA+ LV +TL EK+ QL + A GVPRLG+P YEWWSE+LHG++
Sbjct: 38 SAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADN 97
Query: 83 GRRTNTPPGTHFDS-EVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMHNLGNAGL 141
G PG F+S V ATSFP VIL+ ASFN SLW+ IG ++ EARAM+N G AGL
Sbjct: 98 G------PGVSFNSGPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGL 151
Query: 142 TFWSPNINVVRDPRWGRVMETPGEDPFVVGRYSVNYVRGLQDVEGQENTADLSTRPLKVS 201
TFW+PNIN+ RDPRWGR ETPGEDP V YSV +V+G Q + ++ D L +S
Sbjct: 152 TFWAPNINIFRDPRWGRGQETPGEDPAVASAYSVEFVKGFQGGKWKKVRDDGEDGKLMLS 211
Query: 202 ACCKHYAAYDLDNWKGVDRFHFDSKVTEQDMIETFNLPFEMCVREGDASSVMCSYNRVNG 261
ACCKHY AYDL+ W R+ F++ VTEQDM +T+ PF+ C++EG AS +MCSYN+VNG
Sbjct: 212 ACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQEGKASCLMCSYNQVNG 271
Query: 262 IPTCADSKLLNQTIRGDWNLHGYIVSDCDSIQTIVESHKFLNDTKEEAVARVLKAGLDLD 321
+P CA LL Q R +W GYI SDCD++ TI E + + E+AVA VLKAG+D++
Sbjct: 272 VPACARKDLL-QKARDEWGFQGYITSDCDAVATIFEYQTYTK-SPEDAVADVLKAGMDIN 329
Query: 322 CGDYYTNFTVGAVQQGKVRETDIDRSLRFLYVVLMRLGYFDGSP---QYKSLGKNDICNP 378
CG Y T A+++GKV+E DIDR+L L+ V +RLG FDG P Y LG N++C
Sbjct: 330 CGSYMLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTK 389
Query: 379 QHIELAGEAAAQGIVLLKNDNGTLPFHNATIKTLAVVGPHANATKAMIGNYEGIPCRYIS 438
+H ELA EAA QGIVLLKND LP + + + +LA++GP AN + G+Y G+PC+ +
Sbjct: 390 EHRELALEAARQGIVLLKNDKKFLPLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTT 449
Query: 439 PMTGLSTY-GNVNYAFGCADIACKNDSMISQATDAAKNADATIIVTGLDLSIEAEALDRN 497
GL Y ++A GC D++C +D+ +A AK AD ++V GLDLS E E DR
Sbjct: 450 LFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKRADFVVVVAGLDLSQETEDHDRV 509
Query: 498 DLYLPGFQTQLINQVADAAKGPVILVLMCAGGVDISFAKNNPKIKSILWAGYPGEEGGRA 557
L LPG Q LI+ VA +K PV+LVL G VD+SFAK +P+I SILW GYPGE GG+A
Sbjct: 510 SLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQA 569
Query: 558 IADIVFGKYNPGGKLPLTWYEGNYVDKIPFTSMPLR--SVDKLPGRTYKFFDGPVVYPFG 615
+A+I+FG YNPGG+LP+TWY ++ +P T M +R PGRTY+F+ G VVY FG
Sbjct: 570 LAEIIFGDYNPGGRLPMTWYPESFTA-VPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFG 628
Query: 616 YGLSYTLFKYNLAFSNKSIDVKLDKFQVCRDLNYTNGATKP------QCPAVQTADL-KC 668
YGLSYT F Y + + K K + R + + KP + VQ D+ C
Sbjct: 629 YGLSYTKFSYKILSAPK-------KLSLSRSSVQDSISRKPLLQRRDELDYVQIEDIASC 681
Query: 669 NDNYFTFEIEVQNVGKVDGSEVVMVYSKLPGI-AGTPIKQLIGFQRVYVAAGQSAKVNFT 727
F I V NVG++DGS VVM++S+ P + G P KQL+GF RV+ A+G+S +
Sbjct: 682 ESLRFNVHISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGFDRVHTASGRSTETEIV 741
Query: 728 LNVCDSLRIIDFAANSILAAGAHTILLGD 756
++ C L + + +L G H ++LGD
Sbjct: 742 VDPCKHLSVANEEGKRVLPLGDHVLMLGD 770
|
Length = 779 |
| >gnl|CDD|185053 PRK15098, PRK15098, beta-D-glucoside glucohydrolase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|216783 pfam01915, Glyco_hydro_3_C, Glycosyl hydrolase family 3 C-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|216204 pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|224389 COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|222669 pfam14310, Fn3-like, Fibronectin type III-like domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 769 | |||
| PLN03080 | 779 | Probable beta-xylosidase; Provisional | 100.0 | |
| PRK15098 | 765 | beta-D-glucoside glucohydrolase; Provisional | 100.0 | |
| COG1472 | 397 | BglX Beta-glucosidase-related glycosidases [Carboh | 100.0 | |
| PF00933 | 299 | Glyco_hydro_3: Glycosyl hydrolase family 3 N termi | 100.0 | |
| PRK05337 | 337 | beta-hexosaminidase; Provisional | 100.0 | |
| PF01915 | 227 | Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-ter | 100.0 | |
| PF14310 | 71 | Fn3-like: Fibronectin type III-like domain; PDB: 3 | 99.82 | |
| PF07705 | 101 | CARDB: CARDB; InterPro: IPR011635 The APHP (acidic | 96.62 | |
| PF10633 | 78 | NPCBM_assoc: NPCBM-associated, NEW3 domain of alph | 95.13 | |
| PF12690 | 82 | BsuPI: Intracellular proteinase inhibitor; InterPr | 93.87 | |
| COG0486 | 454 | ThdF Predicted GTPase [General function prediction | 90.69 | |
| PF14874 | 102 | PapD-like: Flagellar-associated PapD-like | 90.3 | |
| PRK13202 | 104 | ureB urease subunit beta; Reviewed | 84.94 | |
| PRK13203 | 102 | ureB urease subunit beta; Reviewed | 84.63 | |
| PF13473 | 104 | Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D | 83.37 | |
| cd00407 | 101 | Urease_beta Urease beta-subunit; Urease is a nicke | 82.48 | |
| TIGR00192 | 101 | urease_beta urease, beta subunit. In a number of s | 81.64 | |
| PF00699 | 100 | Urease_beta: Urease beta subunit CAUTION: The Pros | 80.19 |
| >PLN03080 Probable beta-xylosidase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-163 Score=1444.34 Aligned_cols=739 Identities=48% Similarity=0.898 Sum_probs=634.9
Q ss_pred ccccCcchhhhcccCCCCCcccCCCCChHHHHHHHHhhcCHHHHHHhhcCcccCcCCCCcchhHHHhhhccccccccccC
Q 047862 7 TYVCDPARFAELKLKLSDFAFCDAKLPYPVRAKDLVDRMTLAEKVQQLGDLAYGVPRLGLPLYEWWSEALHGVSYIGRRT 86 (769)
Q Consensus 7 ~~~~~~~~f~d~~~~~~~~~~~d~~~~~~~rv~~ll~~MTleEKv~ql~~~~~~i~~lgi~~~~~~~~~~~gv~~~~~~~ 86 (769)
.|.||. ++.+.+||||+++++++|+++||++||||||++||.+...+++|||||.+.||+|++||++..+
T Consensus 29 ~~~c~~-------~~~~~~~~~~~~~~~~~r~~~Ll~~mTleEKv~~l~~~~~~vpRlGIP~~~~~~d~~hGv~~~~--- 98 (779)
T PLN03080 29 QFPCKP-------PTFSAYPFCNASLPIPARARSLVSLLTLDEKIAQLSNTAAGVPRLGIPPYEWWSESLHGLADNG--- 98 (779)
T ss_pred CcCCCC-------ccccCCCccCCCCCHHHHHHHHHHhcCHHHHHHHhcCCCCCCCcCCCCccceecccccccccCC---
Confidence 455875 4566799999999999999999999999999999998888999999999999999999997554
Q ss_pred CCCCccccC-CCCCCcccCchhhHhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeecceecccCCCCCCccCCCcCC
Q 047862 87 NTPPGTHFD-SEVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMHNLGNAGLTFWSPNINVVRDPRWGRVMETPGE 165 (769)
Q Consensus 87 ~~~~g~~~~-~~~~~~t~fP~~~~laAt~d~~l~~~~g~~~~~E~ra~~~~g~~G~~~laP~vdl~r~p~~gR~~e~fge 165 (769)
+|+.+. +.+.++|.||++|++|||||++|++++|+++|+|+|+++|.+.+|+++|+|++||.|||||||++|||||
T Consensus 99 ---~g~~~~~g~~~~aT~FP~~i~laAt~d~~L~~~~g~~ig~E~ra~g~~~~~G~~~~aP~vdi~rdPrwGR~~EtfGE 175 (779)
T PLN03080 99 ---PGVSFNSGPVSAATSFPQVILSAASFNRSLWRAIGSAIAVEARAMYNAGQAGLTFWAPNINIFRDPRWGRGQETPGE 175 (779)
T ss_pred ---CccccccCCCCCceECchHHhhhhcCCHHHHHHHHHHHHHHHHhhccccccCcceeecccccccCCCcCccccCcCC
Confidence 577663 3355799999999999999999999999999999999976655577889999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhhccccCCCCccccCCCCCeeeEeecccccCccCCCCCCccccccccCCHHHHHHhccHHHHHHHH
Q 047862 166 DPFVVGRYSVNYVRGLQDVEGQENTADLSTRPLKVSACCKHYAAYDLDNWKGVDRFHFDSKVTEQDMIETFNLPFEMCVR 245 (769)
Q Consensus 166 Dp~l~~~~a~a~v~GlQ~~~g~~~~~~~~~~~~~V~a~~KHFpg~~~~~~~~~~r~~~~~~~~~~~l~e~~l~pF~~ai~ 245 (769)
||+|+++|+.|||+|||+.+......+...++.+|+||+||||||+++.+.+..|...++.+++++|+|+||+||++||+
T Consensus 176 DP~lv~~~a~a~V~GlQ~~~~~~~~~~~~~~~~~V~a~~KHF~g~~~e~~~~~~r~~~~~~v~~~~L~e~yl~PF~~ai~ 255 (779)
T PLN03080 176 DPAVASAYSVEFVKGFQGGKWKKVRDDGEDGKLMLSACCKHYTAYDLEKWGNFSRYTFNAVVTEQDMEDTYQPPFKSCIQ 255 (779)
T ss_pred CHHHHHHHHHHHHHHhcCCCcccccccccCCCceEEEECCeeeCCCccccCCccccCccCccCHHHHHhhhhHHHHHHHH
Confidence 99999999999999999841000000000124569999999999998877777888889999999999999999999999
Q ss_pred cCCCceeeecccccCCccccCCHHHHHHHHHhhcCCCeEEEcCchhHHHhhhhcccccCCHHHHHHHHHHcCCCCCCCcc
Q 047862 246 EGDASSVMCSYNRVNGIPTCADSKLLNQTIRGDWNLHGYIVSDCDSIQTIVESHKFLNDTKEEAVARVLKAGLDLDCGDY 325 (769)
Q Consensus 246 ~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~ 325 (769)
+|.+++||||||++||+|||.|++||++ ||+||||+|+|||||++|..+.. .|++..+.+|++++||+||+||+|..+
T Consensus 256 ~g~~~~VM~sYn~vnG~Pa~~s~~lL~~-LR~ewGF~G~VvSD~~a~~~~~~-~~~~~~~~~ea~~~Al~AG~Dl~~~~~ 333 (779)
T PLN03080 256 EGKASCLMCSYNQVNGVPACARKDLLQK-ARDEWGFQGYITSDCDAVATIFE-YQTYTKSPEDAVADVLKAGMDINCGSY 333 (779)
T ss_pred hcCCeEEEeCCcCcCCccccCCHHHHHH-HHHHhCcCCeEecchHHHHHhhh-cccccCCHHHHHHHHHHcCCCcccCch
Confidence 9988899999999999999999999986 99999999999999999999987 777777899999999999999999887
Q ss_pred hHHHHHHHHHcCCCcHHHHHhHHHHHHHHHHHhcCCCCCC---CccCCCCCCCCCHHHHHHHHHHHhhcceeeccCCCCC
Q 047862 326 YTNFTVGAVQQGKVRETDIDRSLRFLYVVLMRLGYFDGSP---QYKSLGKNDICNPQHIELAGEAAAQGIVLLKNDNGTL 402 (769)
Q Consensus 326 ~~~~l~~av~~g~i~~~~id~av~RiL~~k~~~Glf~~~p---~~~~~~~~~v~~~~~~~la~eaA~eSiVLLKN~~~~L 402 (769)
+.+.|.+||++|+|++++||+||+|||++|+++|+|++.+ +|.+.....+.+++|+++|+|+|++|||||||++++|
T Consensus 334 ~~~~l~~av~~G~i~e~~ID~av~RiL~~k~rlGlfd~~~~~~~~~~~~~~~v~~~~h~~lA~eaA~~siVLLKN~~~~L 413 (779)
T PLN03080 334 MLRHTQSAIEKGKVQEEDIDRALFNLFSVQLRLGLFDGDPRNGWYGKLGPNNVCTKEHRELALEAARQGIVLLKNDKKFL 413 (779)
T ss_pred hHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCcCCCcccccccccccccCCHHHHHHHHHHHHhCEEEEecCCCCC
Confidence 7889999999999999999999999999999999999533 2333345678899999999999999999999999999
Q ss_pred CCCCCCCceEEEEccCcccccccccccccCCCccCCHHHHHhhcc-ceeEeeccccccCCCchhhHHHHHHccCCCEEEE
Q 047862 403 PFHNATIKTLAVVGPHANATKAMIGNYEGIPCRYISPMTGLSTYG-NVNYAFGCADIACKNDSMISQATDAAKNADATII 481 (769)
Q Consensus 403 PL~~~~~~kIaviG~~a~~~~~~~G~~~g~~~~~~t~~~gl~~~~-~~~~~~g~~~~~~~~~~~~~~a~~~a~~aD~vIv 481 (769)
||++.+.+||+||||+|+....++|+|++.+++.+|++++|+++. .++|..||....|.+...+++|+++|++||+|||
T Consensus 414 PL~~~~~~~IaViGp~A~~~~~~~g~~~~~~~~~~t~~~gl~~~~~~~~y~~g~~~~~~~~~~~~~~A~~~A~~aD~vIv 493 (779)
T PLN03080 414 PLNKSEVSSLAIIGPMANDPYNLGGDYTGVPCQPTTLFKGLQAYVKKTSFAAGCKDVSCNSDTGFGEAIAIAKRADFVVV 493 (779)
T ss_pred CCCCCCCCEEEEECCCCCCcCcCCCCCCCCCCCCCCHHHHHHHHhhcceeccCccccccCchhhHHHHHHHhccCCEEEE
Confidence 998765579999999999988788889988888999999999875 5788889865555556678999999999999999
Q ss_pred EEcCCCCcccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEeCCceeeecccccCCCccEEEEccCCCchhHHHHHHH
Q 047862 482 VTGLDLSIEAEALDRNDLYLPGFQTQLINQVADAAKGPVILVLMCAGGVDISFAKNNPKIKSILWAGYPGEEGGRAIADI 561 (769)
Q Consensus 482 vvG~~~~~e~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~pG~~~g~AlAdV 561 (769)
++|.+...++|+.||.+|.||+.|.+||++|++++++|||||+++|+|++|+|+.++++++|||++||||+++|+|||||
T Consensus 494 ~~G~~~~~e~E~~Dr~~l~Lp~~Q~~LI~~va~~~~~pvIvVl~~g~Pv~l~~~~~~~~v~AIl~~~ypGqegG~AiAdv 573 (779)
T PLN03080 494 VAGLDLSQETEDHDRVSLLLPGKQMDLISSVASVSKKPVVLVLTGGGPVDVSFAKQDPRIASILWIGYPGEVGGQALAEI 573 (779)
T ss_pred EeCCCccccccCCCcccccCCccHHHHHHHHHhhcCCCEEEEEeCCceeeccchhccCCCCeEEEccCCcccchhhhHHH
Confidence 99999889999999999999999999999999877789999999999999999876678999999999999999999999
Q ss_pred HhcCCCCCccccceecccCcCCCCCccCCCCCCCCC--CCCCccccCCCCCcccCCCCCCCCCceecccccccccccccc
Q 047862 562 VFGKYNPGGKLPLTWYEGNYVDKIPFTSMPLRSVDK--LPGRTYKFFDGPVVYPFGYGLSYTLFKYNLAFSNKSIDVKLD 639 (769)
Q Consensus 562 L~G~~nPsGkLPvT~~~~~~~~~~p~~~~~~~~~~~--y~g~~Yr~~~~~~~ypFG~GLSYTtF~ys~~~~~~~~~~~~~ 639 (769)
|||++|||||||+||||+++ .++|++++++++++. |+|++||||+.+|+||||||||||||+|++++++..++++..
T Consensus 574 LfG~vnPsGkLPvT~~p~~~-~~~P~~~~~~~~~~~~~~pg~~Yr~~~~~p~ypFG~GLSYTtF~ys~~~~~~~~~~~~~ 652 (779)
T PLN03080 574 IFGDYNPGGRLPMTWYPESF-TAVPMTDMNMRADPSRGYPGRTYRFYTGDVVYGFGYGLSYTKFSYKILSAPKKLSLSRS 652 (779)
T ss_pred HcCCCCCCCcCeeeeccccc-ccCCccccCcccccccCCCCCCceeCCCCcceeccCCCccceeEecccccccccccccc
Confidence 99999999999999989886 579998888765433 899999999999999999999999999999874322112110
Q ss_pred ccccccccccCCCCCCCCC--CCccccc-ccCCCceEEEEEEEEecCCCCcceeEEEEEeCC-CCCCCcchhcccccccc
Q 047862 640 KFQVCRDLNYTNGATKPQC--PAVQTAD-LKCNDNYFTFEIEVQNVGKVDGSEVVMVYSKLP-GIAGTPIKQLIGFQRVY 715 (769)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~v~v~V~NtG~~~G~evvQlYv~~p-~~~~~P~k~L~gF~kv~ 715 (769)
...... .......+.+ ....... ..|+...++|+|+|||||+++|+||||||+++| ++..+|.|||+||+||+
T Consensus 653 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~VtNtG~~~G~evvQlYv~~p~~~~~~P~k~L~gF~kv~ 729 (779)
T PLN03080 653 SVQDSI---SRKPLLQRRDELDYVQIEDIASCESLRFNVHISVSNVGEMDGSHVVMLFSRSPPVVPGVPEKQLVGFDRVH 729 (779)
T ss_pred cccccc---ccccccccccccccccccccccCCCceEEEEEEEEECCcccCcEEEEEEEecCccCCCCcchhccCcEeEe
Confidence 000000 0000000000 0000000 123323699999999999999999999999999 77889999999999999
Q ss_pred cCCCCEEEEEEEeccCCCeeEEeCCCCEEEcCeeEEEEEecCCceeEEE
Q 047862 716 VAAGQSAKVNFTLNVCDSLRIIDFAANSILAAGAHTILLGDGAVSFPLQ 764 (769)
Q Consensus 716 L~pGes~~V~~~l~~~~~l~~~d~~~~~~~~~G~y~i~vG~ss~~~~~~ 764 (769)
|+||||++|+|+|+.+++|++||++++|++|+|+|+|+||.+++++.++
T Consensus 730 L~~Ges~~V~~~l~~~~~ls~~d~~~~~~v~~G~y~l~vG~~~~~~~~~ 778 (779)
T PLN03080 730 TASGRSTETEIVVDPCKHLSVANEEGKRVLPLGDHVLMLGDLEHSLSIE 778 (779)
T ss_pred eCCCCEEEEEEEeCchHHceEEcCCCcEEEeCccEEEEEeCCccceEEe
Confidence 9999999999999975689999999999999999999999999766655
|
|
| >PRK15098 beta-D-glucoside glucohydrolase; Provisional | Back alignment and domain information |
|---|
| >COG1472 BglX Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PF00933 Glyco_hydro_3: Glycosyl hydrolase family 3 N terminal domain; InterPro: IPR001764 O-Glycosyl hydrolases 3 | Back alignment and domain information |
|---|
| >PRK05337 beta-hexosaminidase; Provisional | Back alignment and domain information |
|---|
| >PF01915 Glyco_hydro_3_C: Glycosyl hydrolase family 3 C-terminal domain; InterPro: IPR002772 Glycoside hydrolase family 3 GH3 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3 | Back alignment and domain information |
|---|
| >PF14310 Fn3-like: Fibronectin type III-like domain; PDB: 3ABZ_D 3AC0_D 2X40_A 2X41_A 2X42_A | Back alignment and domain information |
|---|
| >PF07705 CARDB: CARDB; InterPro: IPR011635 The APHP (acidic peptide-dependent hydrolases/peptidase) domain is found in a variety of different proteins | Back alignment and domain information |
|---|
| >PF10633 NPCBM_assoc: NPCBM-associated, NEW3 domain of alpha-galactosidase; InterPro: IPR018905 This domain has been named NEW3, but its function is not known | Back alignment and domain information |
|---|
| >PF12690 BsuPI: Intracellular proteinase inhibitor; InterPro: IPR020481 BsuPI is a intracellular proteinase inhibitor that directly regulates the major intracellular proteinase (ISP-1) activity in vivo | Back alignment and domain information |
|---|
| >COG0486 ThdF Predicted GTPase [General function prediction only] | Back alignment and domain information |
|---|
| >PF14874 PapD-like: Flagellar-associated PapD-like | Back alignment and domain information |
|---|
| >PRK13202 ureB urease subunit beta; Reviewed | Back alignment and domain information |
|---|
| >PRK13203 ureB urease subunit beta; Reviewed | Back alignment and domain information |
|---|
| >PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D | Back alignment and domain information |
|---|
| >cd00407 Urease_beta Urease beta-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide | Back alignment and domain information |
|---|
| >TIGR00192 urease_beta urease, beta subunit | Back alignment and domain information |
|---|
| >PF00699 Urease_beta: Urease beta subunit CAUTION: The Prosite patterns do not match this subunit of the enzyme; InterPro: IPR002019 Urease 3 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 769 | ||||
| 2x40_A | 721 | Structure Of Beta-Glucosidase 3b From Thermotoga Ne | 5e-42 | ||
| 2x42_A | 721 | Structure Of Beta-Glucosidase 3b From Thermotoga Ne | 5e-41 | ||
| 4i8d_A | 714 | Crystal Structure Of Beta-D-Glucoside Glucohydrolas | 5e-39 | ||
| 3zyz_A | 713 | Crystal Structure Of A Glycoside Hydrolase Family 3 | 6e-39 | ||
| 4i3g_A | 829 | Crystal Structure Of Desr, A Beta-glucosidase From | 5e-31 | ||
| 4i3g_A | 829 | Crystal Structure Of Desr, A Beta-glucosidase From | 5e-13 | ||
| 3rrx_A | 822 | Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Bet | 3e-29 | ||
| 3usz_A | 822 | Crystal Structure Of Truncated Exo-1,31,4-Beta-Gluc | 3e-29 | ||
| 1lq2_A | 602 | Crystal Structure Of Barley Beta-D-Glucan Glucohydr | 7e-29 | ||
| 1ex1_A | 605 | Beta-D-Glucan Exohydrolase From Barley Length = 605 | 8e-29 | ||
| 3ac0_A | 845 | Crystal Structure Of Beta-Glucosidase From Kluyvero | 3e-23 | ||
| 3ac0_A | 845 | Crystal Structure Of Beta-Glucosidase From Kluyvero | 7e-21 | ||
| 3abz_A | 845 | Crystal Structure Of Se-Met Labeled Beta-Glucosidas | 2e-20 | ||
| 3bmx_A | 642 | Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis | 1e-06 | ||
| 4gyj_A | 648 | Crystal Structure Of Mutant (D318n) Bacillus Subtil | 4e-06 | ||
| 3lk6_A | 616 | Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) Fro | 5e-06 |
| >pdb|2X40|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Glycerol Length = 721 | Back alignment and structure |
|
| >pdb|2X42|A Chain A, Structure Of Beta-Glucosidase 3b From Thermotoga Neapolitana In Complex With Alpha-D-Glucose Length = 721 | Back alignment and structure |
| >pdb|4I8D|A Chain A, Crystal Structure Of Beta-D-Glucoside Glucohydrolase From Trichoderma Reesei Length = 714 | Back alignment and structure |
| >pdb|3ZYZ|A Chain A, Crystal Structure Of A Glycoside Hydrolase Family 3 Beta-Glucosidase, Bgl1 From Hypocrea Jecorina At 2.1a Resolution. Length = 713 | Back alignment and structure |
| >pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 | Back alignment and structure |
| >pdb|4I3G|A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezueale In Complex With D-glucose. Length = 829 | Back alignment and structure |
| >pdb|3RRX|A Chain A, Crystal Structure Of Q683a Mutant Of Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 | Back alignment and structure |
| >pdb|3USZ|A Chain A, Crystal Structure Of Truncated Exo-1,31,4-Beta-Glucanase (Exop) From Pseudoalteromonas Sp. Bb1 Length = 822 | Back alignment and structure |
| >pdb|1LQ2|A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole Length = 602 | Back alignment and structure |
| >pdb|1EX1|A Chain A, Beta-D-Glucan Exohydrolase From Barley Length = 605 | Back alignment and structure |
| >pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 | Back alignment and structure |
| >pdb|3AC0|A Chain A, Crystal Structure Of Beta-Glucosidase From Kluyveromyces Marxianus In Complex With Glucose Length = 845 | Back alignment and structure |
| >pdb|3ABZ|A Chain A, Crystal Structure Of Se-Met Labeled Beta-Glucosidase From Kluyveromyces Marxianus Length = 845 | Back alignment and structure |
| >pdb|3BMX|A Chain A, Beta-N-Hexosaminidase (Ybbd) From Bacillus Subtilis Length = 642 | Back alignment and structure |
| >pdb|4GYJ|A Chain A, Crystal Structure Of Mutant (D318n) Bacillus Subtilus Family 3 Glycoside Hydrolase (Nagz) In Complex With Glcnac-Murnac (Space Group P1) Length = 648 | Back alignment and structure |
| >pdb|3LK6|A Chain A, Beta-N-Hexosaminidase N318d Mutant (Ybbd_n318d) From Bacillus Subtilis Length = 616 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* Length = 721 | Back alignment and structure |
|---|
Score = 490 bits (1263), Expect = e-164
Identities = 186/808 (23%), Positives = 314/808 (38%), Gaps = 176/808 (21%)
Query: 37 RAKDLVDRMTLAEKVQQL-GDLA------------------YGVPRLGLPLYEWWSEALH 77
+ +++ ++TL EKV+ + G + VPR+GLP + ++
Sbjct: 3 KVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPA 61
Query: 78 GVSYIGRRTNTPPGTHFDSEVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMHNLG 137
G+ R N ++ T+FP I+ +++N L +++G+ + E R
Sbjct: 62 GL-----RINPTRENDENTY--YTTAFPVEIMLASTWNRELLEEVGKAMGEEVREY---- 110
Query: 138 NAGLTFWSPNINVVRDPRWGRVMETPGEDPFVVGRYSVNYVRGLQDVEGQENTADLSTRP 197
+ +P +N+ R+P GR E EDP + G + ++V+G+Q
Sbjct: 111 GVDVLL-APAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQSQ------------- 156
Query: 198 LKVSACCKHYAAYDLDNWKGVDRFHFDSKVTEQDMIETFNLPFEMCVREGDASSVMCSYN 257
V AC KH+ A + + R D+ V+E+ + E + FE+ V++ SVM +YN
Sbjct: 157 -GVGACIKHFVANNQETN----RMVVDTIVSERALREIYLRGFEIAVKKSKPWSVMSAYN 211
Query: 258 RVNGIPTCADSKLLNQTIRGDWNLHGYIVSDCDSIQTIVESHKFLNDTKEEAVARVLKAG 317
++NG + LL + +R +W G+++SD + VE LKAG
Sbjct: 212 KLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGDNPVEQ---------------LKAG 256
Query: 318 LDLDC-GDYYTNFT---------VGAVQQGKVRETDIDRSLRFLYVVLMRLGYFDGSPQY 367
DL G Y T + A+++GK+ E +D +R + VL+ F
Sbjct: 257 NDLIMPGKAYQVNTERRDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFKNYRY- 315
Query: 368 KSLGKNDICNPQHIELAGEAAAQGIVLLKNDNGTLPFHNATIKTLAVVGPHANATKAM-I 426
N +H ++A EA A+G+VLL+N+ LP + +A+ G T
Sbjct: 316 ----SNKPDLEKHAKVAYEAGAEGVVLLRNEE-ALPL--SENSKIALFGTGQIETIKGGT 368
Query: 427 GNYEGIPCRYISPMTGLSTYG---NVNYAFGCADIACK---------------------- 461
G+ + P IS + G+ G + A D K
Sbjct: 369 GSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIKPKL 428
Query: 462 --NDSMISQATDAAKNADATIIVTGLDLSIEAEALDR----NDLYLPGFQTQLINQVADA 515
N + AK D +IV E DR D YL +T LI V+
Sbjct: 429 PENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSRE 485
Query: 516 AKG---PVILVLMCAGGVDISFAKNNPKIKSILWAGYPGEEGGRAIADIVFGKYNPGGKL 572
VI++L V++ ++ IL G+E GR +AD++ G+ NP GKL
Sbjct: 486 FHEQGKKVIVLLNIGSPVEVVSWRDLV--DGILLVWQAGQETGRIVADVLTGRINPSGKL 543
Query: 573 PLTWYEGNYVDKIPFTSMPLRSVDKLPGRT--------YKFFDG---PVVYPFGYGLSYT 621
P T+ +P + P D Y+++D Y FGYGLSYT
Sbjct: 544 PTTF--PRDYSDVPSWTFPGEPKDNPQKVVYEEDIYVGYRYYDTFGVEPAYEFGYGLSYT 601
Query: 622 LFKYNLAFSNKSIDVKLDKFQVCRDLNYTNGATKPQCPAVQTADLKCNDNYFTFEIEVQN 681
F+Y+ D+ + + + ++N
Sbjct: 602 TFEYS--------DLNVSF----------------------------DGETLRVQYRIEN 625
Query: 682 VGKVDGSEVVMVYSKLP-GIAGTPIKQLIGFQRV-YVAAGQSAKVNFTLNVCDSLRIIDF 739
G G EV VY K P G P ++L F + + G+S +V + V L +
Sbjct: 626 TGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN- 683
Query: 740 AANSILAAGAHTILLGDGAVSFPLQVNL 767
++ AG + + +G + + L+
Sbjct: 684 GEEWVVEAGEYEVRVGASSRNIKLKGTF 711
|
| >3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A Length = 822 | Back alignment and structure |
|---|
| >1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* Length = 602 | Back alignment and structure |
|---|
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 | Back alignment and structure |
|---|
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* Length = 845 | Back alignment and structure |
|---|
| >3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* Length = 642 | Back alignment and structure |
|---|
| >3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* Length = 535 | Back alignment and structure |
|---|
| >2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A Length = 340 | Back alignment and structure |
|---|
| >3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} Length = 351 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 769 | |||
| 3abz_A | 845 | Beta-glucosidase I; glycoside hydrolase family3 be | 100.0 | |
| 3zyz_A | 713 | Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.1 | 100.0 | |
| 2x41_A | 721 | Beta-glucosidase; hydrolase, TIM barrel fold, fibr | 100.0 | |
| 1x38_A | 602 | Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domai | 100.0 | |
| 3rrx_A | 822 | EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,( | 100.0 | |
| 3bmx_A | 642 | Uncharacterized lipoprotein YBBD; beta-N-hexosamin | 100.0 | |
| 3sql_A | 535 | Glycosyl hydrolase family 3; structural genomics, | 100.0 | |
| 3tev_A | 351 | Glycosyl hyrolase, family 3; PSI-biology, midwest | 100.0 | |
| 4gvf_A | 349 | Beta-hexosaminidase; TIM-barrel, hydrolase; HET: N | 100.0 | |
| 2oxn_A | 340 | Beta-hexosaminidase; TIM-barrel, hydrolase; HET: O | 100.0 | |
| 4g6c_A | 348 | Beta-hexosaminidase 1; ssgcid, niaid, structural g | 100.0 | |
| 3idu_A | 127 | Uncharacterized protein; all beta-protein, structu | 97.1 | |
| 2l0d_A | 114 | Cell surface protein; structural genomics, northea | 96.58 | |
| 2kut_A | 122 | Uncharacterized protein; structural genomics, PSI- | 96.11 | |
| 3isy_A | 120 | Bsupi, intracellular proteinase inhibitor; intrace | 91.34 | |
| 4ep8_B | 101 | Urease subunit beta; alpha-beta barrel, nickel met | 87.59 | |
| 1cuo_A | 129 | Protein (azurin ISO-2); beta barrel, periplasmic, | 87.16 | |
| 1w8o_A | 601 | Bacterial sialidase; 3D-structure, glycosidase, hy | 84.82 | |
| 2x3c_A | 343 | Toxic extracellular endopeptidase; hydrolase; 1.99 | 82.27 | |
| 3ay2_A | 167 | Lipid modified azurin protein; beta sandwich, bact | 80.63 | |
| 1yew_A | 382 | Particulate methane monooxygenase, B subunit; memb | 80.31 |
| >3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-145 Score=1302.55 Aligned_cols=631 Identities=26% Similarity=0.437 Sum_probs=544.2
Q ss_pred HHHHHHHHhhcCHHHHHHhhcC----cccCcCCCCcchhHHHhhhccccccccccCCCCCccccCCCCCCcccCchhhHh
Q 047862 35 PVRAKDLVDRMTLAEKVQQLGD----LAYGVPRLGLPLYEWWSEALHGVSYIGRRTNTPPGTHFDSEVPGATSFPTVILT 110 (769)
Q Consensus 35 ~~rv~~ll~~MTleEKv~ql~~----~~~~i~~lgi~~~~~~~~~~~gv~~~~~~~~~~~g~~~~~~~~~~t~fP~~~~l 110 (769)
+.|+++||++||+|||++||.+ ...+++|+|||.+ ++.|+.||+... ++.+. .++|.||++++|
T Consensus 3 ~~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~~~----------~~~~~-~~~t~fP~~~~l 70 (845)
T 3abz_A 3 KFDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIRGT----------KFFDG-VPSGCFPNGTGL 70 (845)
T ss_dssp CCCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCCCS----------CSTTC-CCBCCCCCHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCeeee----------eccCC-CCcCcCcCHHHH
Confidence 5689999999999999999986 3567899999998 467888876411 11110 148999999999
Q ss_pred hhcCCHHHHHHHHHHHHHHHHHhhccCCCccee-ecceecccCCCCCCccCCCcCCCHHHHHHHHHHHHhhhccccCCCC
Q 047862 111 TASFNESLWKKIGQTVSTEARAMHNLGNAGLTF-WSPNINVVRDPRWGRVMETPGEDPFVVGRYSVNYVRGLQDVEGQEN 189 (769)
Q Consensus 111 aAt~d~~l~~~~g~~~~~E~ra~~~~g~~G~~~-laP~vdl~r~p~~gR~~e~fgeDp~l~~~~a~a~v~GlQ~~~g~~~ 189 (769)
|||||++|++++|+++|+|+|++ |+|+ |+|++||.|||+|||++|+|||||+|+++|+.|+|+|||+. |
T Consensus 71 aat~d~~l~~~~g~~~g~E~ra~------Gi~~~laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~-g--- 140 (845)
T 3abz_A 71 ASTFDRDLLETAGKLMAKESIAK------NAAVILGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE-G--- 140 (845)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHHT------TCSEEECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-T---
T ss_pred HhcCCHHHHHHHHHHHHHHHHHc------CCCEEecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-C---
Confidence 99999999999999999999999 8898 99999999999999999999999999999999999999997 6
Q ss_pred ccccCCCCCeeeEeecccccCccCCCCCCccccccccCCHHHHHHhccHHHHHHHHcCCCceeeecccccCCccccCCHH
Q 047862 190 TADLSTRPLKVSACCKHYAAYDLDNWKGVDRFHFDSKVTEQDMIETFNLPFEMCVREGDASSVMCSYNRVNGIPTCADSK 269 (769)
Q Consensus 190 ~~~~~~~~~~V~a~~KHFpg~~~~~~~~~~r~~~~~~~~~~~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ 269 (769)
|+||+||||||+.+ ..|...++.+++++|+|+||+||+++|+++.+++||||||++||+|||+|++
T Consensus 141 ----------V~a~~KHFpg~g~e----~~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~~VM~syn~ing~pa~~s~~ 206 (845)
T 3abz_A 141 ----------IAATVKHFVCNDLE----DQRFSSNSIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGEHCSQSKK 206 (845)
T ss_dssp ----------CBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTTSHHHHHHHHHHCCSEEEECSSEETTEEGGGCHH
T ss_pred ----------eeEEeeccccCCcc----cCCccccCCCCHHHHHHhhHHHHHHHHHhcCCCEEEecCCCcCCEeccCCHH
Confidence 99999999999864 3566778889999999999999999997444679999999999999999999
Q ss_pred HHHHHHHhhcCCCeEEEcCchhHHHhhhhcccccCCHHHHHHHHHHcCCCCCCC-c--chH-HHHHHHHHcCC-CcHHHH
Q 047862 270 LLNQTIRGDWNLHGYIVSDCDSIQTIVESHKFLNDTKEEAVARVLKAGLDLDCG-D--YYT-NFTVGAVQQGK-VRETDI 344 (769)
Q Consensus 270 ll~~lLR~e~gF~G~ViSD~~~~~~~~~~~~~~~~~~~ea~~~al~AG~D~~~~-~--~~~-~~l~~av~~g~-i~~~~i 344 (769)
||++|||+||||+|+|||||++|. ++++|++||+||+|+ + ++. +.|.+||++|+ |++++|
T Consensus 207 ll~~lLR~e~GF~G~VvSD~~~~~---------------~~~~Al~AG~D~~m~~~~~~~~~~~l~~av~~G~~i~~~~i 271 (845)
T 3abz_A 207 LLIDILRDEWKWDGMLMSDWFGTY---------------TTAAAIKNGLDIEFPGPTRWRTRALVSHSLNSREQITTEDV 271 (845)
T ss_dssp HHTCCCCCCTCCCSEEECCTTCCC---------------CSHHHHHHTCCBBCSSSCSSCCHHHHHHHHHTTCSCCHHHH
T ss_pred HHHHHHhhccCCCeEEEcccccHH---------------HHHHHHHcCCCcccCCchhhhHHHHHHHHHHcCccchHHHH
Confidence 999999999999999999998753 246899999999996 2 223 48999999999 999999
Q ss_pred HhHHHHHHHHHHHhc----CCCCCCCccCCCCCCCCCHHHHHHHHHHHhhcceeeccCCCCCCCCCCCCceEEEEccCcc
Q 047862 345 DRSLRFLYVVLMRLG----YFDGSPQYKSLGKNDICNPQHIELAGEAAAQGIVLLKNDNGTLPFHNATIKTLAVVGPHAN 420 (769)
Q Consensus 345 d~av~RiL~~k~~~G----lf~~~p~~~~~~~~~v~~~~~~~la~eaA~eSiVLLKN~~~~LPL~~~~~~kIaviG~~a~ 420 (769)
|+||+|||++|+++| +|+. | +.......+++++|+++|+++|++|||||||++++|||++ .+||+||||+|+
T Consensus 272 d~av~RIL~~k~~~g~l~~~~~~-p-~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A~ 347 (845)
T 3abz_A 272 DDRVRQVLKMIKFVVDNLEKTGI-V-ENGPESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNAK 347 (845)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHCC-C-TTCCCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTTS
T ss_pred HHHHHHHHHHHHHhCCccccccC-C-ccCccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCcc
Confidence 999999999999999 9984 3 3322223478999999999999999999999999999986 469999999999
Q ss_pred ccccccccccc-CCCccCCHHHHHhhcc--ceeEeeccccc------------------------------------c--
Q 047862 421 ATKAMIGNYEG-IPCRYISPMTGLSTYG--NVNYAFGCADI------------------------------------A-- 459 (769)
Q Consensus 421 ~~~~~~G~~~g-~~~~~~t~~~gl~~~~--~~~~~~g~~~~------------------------------------~-- 459 (769)
....++|++.. .+.+.+||++||+++. .+.|..||... .
T Consensus 348 ~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~~ 427 (845)
T 3abz_A 348 AKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERSD 427 (845)
T ss_dssp CCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSCT
T ss_pred hhhccCCCccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCcc
Confidence 88766665544 5778899999998764 35666554200 0
Q ss_pred --------------------------------------------------------------------------------
Q 047862 460 -------------------------------------------------------------------------------- 459 (769)
Q Consensus 460 -------------------------------------------------------------------------------- 459 (769)
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~~ 507 (845)
T 3abz_A 428 DEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSFC 507 (845)
T ss_dssp TCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCSTT
T ss_pred cccceeeeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeeccccccccccc
Confidence
Q ss_pred -------------------------C------------------------CC-chhhHHHHHHccCCCEEEEEEcCCCCc
Q 047862 460 -------------------------C------------------------KN-DSMISQATDAAKNADATIIVTGLDLSI 489 (769)
Q Consensus 460 -------------------------~------------------------~~-~~~~~~a~~~a~~aD~vIvvvG~~~~~ 489 (769)
. .+ ...+++|+++|++||+||||+|.+...
T Consensus 508 ~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~~ 587 (845)
T 3abz_A 508 FGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGEW 587 (845)
T ss_dssp TTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTTT
T ss_pred cccCcccceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCcc
Confidence 0 00 134678899999999999999999999
Q ss_pred ccccCCCCCCCCChhHHHHHHHHHHhcCCCEEEEEeCCceeeecccccCCCccEEEEccCCCchhHHHHHHHHhcCCCCC
Q 047862 490 EAEALDRNDLYLPGFQTQLINQVADAAKGPVILVLMCAGGVDISFAKNNPKIKSILWAGYPGEEGGRAIADIVFGKYNPG 569 (769)
Q Consensus 490 e~Eg~Dr~~l~Lp~~q~~Li~~v~~~~~~pvVvVl~~g~P~~l~~~~~~~~v~Ail~a~~pG~~~g~AlAdVL~G~~nPs 569 (769)
|+||.||.+|.||+.|++||++|++++ +|||||+++|+|++|+|+. +++|||++|||||++|+||||||||++|||
T Consensus 588 e~Eg~DR~~l~LP~~Q~~LI~aV~a~~-~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNPS 663 (845)
T 3abz_A 588 ETEGYDRENMDLPKRTNELVRAVLKAN-PNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVPN 663 (845)
T ss_dssp SBTTBCCSSSCCCTTHHHHHHHHHHHC-SCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCCC
T ss_pred ccccCCcccccCCHHHHHHHHHHHHhC-CCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCCC
Confidence 999999999999999999999999865 6899999999999999883 799999999999999999999999999999
Q ss_pred ccccceecccCcCCCCCccCCCCCCCC---CCCC---CccccCC---CCCcccCCCCCCCCCceec--cccccccccccc
Q 047862 570 GKLPLTWYEGNYVDKIPFTSMPLRSVD---KLPG---RTYKFFD---GPVVYPFGYGLSYTLFKYN--LAFSNKSIDVKL 638 (769)
Q Consensus 570 GkLPvT~~~~~~~~~~p~~~~~~~~~~---~y~g---~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~~~~~~~~~~~~ 638 (769)
||||+|| |++. +|+|.++. ..... .|.+ .+||||+ .+|+||||||||||||+|+ +++ +
T Consensus 664 GkLP~T~-p~~~-~d~P~~~~-~~~~~g~~~y~eg~~vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~------v-- 732 (845)
T 3abz_A 664 GKLSLSW-PFKL-QDNPAFLN-FKTEFGRVIYGEDIFVGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFK------V-- 732 (845)
T ss_dssp CCCSSCB-CSSG-GGSTTTTS-CSCBTTEEECTTTTCCTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEE------E--
T ss_pred CCCceee-eCch-hhCCcccc-CCCCCCceeccCCccCCCcchhcCCCceeecccCCCcceeEEEeccccc------c--
Confidence 9999998 5664 66886432 11111 0221 2599997 5799999999999999999 887 1
Q ss_pred cccccccccccCCCCCCCCCCCcccccccCCCceEEEEEEEEecC-CCCcceeEEEEEeCC-CCCCCcchhccccccccc
Q 047862 639 DKFQVCRDLNYTNGATKPQCPAVQTADLKCNDNYFTFEIEVQNVG-KVDGSEVVMVYSKLP-GIAGTPIKQLIGFQRVYV 716 (769)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V~NtG-~~~G~evvQlYv~~p-~~~~~P~k~L~gF~kv~L 716 (769)
+. +.++|+|+||||| +++|+||||||+++| +++.+|.|+||||+||+|
T Consensus 733 ~~------------------------------~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L 782 (845)
T 3abz_A 733 TD------------------------------DKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHL 782 (845)
T ss_dssp CS------------------------------SEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE
T ss_pred cC------------------------------CeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEE
Confidence 11 4799999999999 999999999999999 889999999999999999
Q ss_pred CCCCEEEEEEEec-cCCCeeEEeCC-CCEEEcCeeEEEEEecCCceeEEEEe
Q 047862 717 AAGQSAKVNFTLN-VCDSLRIIDFA-ANSILAAGAHTILLGDGAVSFPLQVN 766 (769)
Q Consensus 717 ~pGes~~V~~~l~-~~~~l~~~d~~-~~~~~~~G~y~i~vG~ss~~~~~~~~ 766 (769)
+||||++|+|+|+ . ++|++||+. ++|++|+|+|+|+||.||.+++++..
T Consensus 783 ~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG~ss~di~l~~~ 833 (845)
T 3abz_A 783 EPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVGTSSDDILSVKE 833 (845)
T ss_dssp CTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEESSTTCEEEEEE
T ss_pred CCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEECCCCCceeEEE
Confidence 9999999999999 8 799999996 78999999999999999977776544
|
| >3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A* | Back alignment and structure |
|---|
| >2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A* | Back alignment and structure |
|---|
| >1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A* | Back alignment and structure |
|---|
| >3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A | Back alignment and structure |
|---|
| >3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A* | Back alignment and structure |
|---|
| >3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A* | Back alignment and structure |
|---|
| >3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans} | Back alignment and structure |
|---|
| >4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A* | Back alignment and structure |
|---|
| >2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A | Back alignment and structure |
|---|
| >4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A* | Back alignment and structure |
|---|
| >3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A | Back alignment and structure |
|---|
| >2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans} | Back alignment and structure |
|---|
| >2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens} | Back alignment and structure |
|---|
| >3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ... | Back alignment and structure |
|---|
| >1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A | Back alignment and structure |
|---|
| >1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A* | Back alignment and structure |
|---|
| >2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A | Back alignment and structure |
|---|
| >3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae} | Back alignment and structure |
|---|
| >1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 769 | ||||
| d1x38a1 | 388 | c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-te | 2e-49 | |
| d1x38a2 | 214 | c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, | 1e-26 | |
| d1tr9a_ | 330 | c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio chol | 3e-12 |
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 388 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Score = 176 bits (447), Expect = 2e-49
Identities = 96/394 (24%), Positives = 161/394 (40%), Gaps = 41/394 (10%)
Query: 27 FCDAKLPYPVRAKDLVDRMTLAEKVQQL------------------GDLAYG---VPRLG 65
+ DA P R DL+ RMTLAEK+ Q+ G L G VPR G
Sbjct: 5 YKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKG 64
Query: 66 LPLYEWWSEALHGV--SYIGRRTNTPPGTHFDSE-----VPGATSFPTVILTTASFNESL 118
EW + + G + + R P D+ V GAT FP + A+ + L
Sbjct: 65 ATAKEWQ-DMVDGFQKACMSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYL 123
Query: 119 WKKIGQTVSTEARAMHNLGNAGLTFWSPNINVVRDPRWGRVMETPGEDPFVVGRYSVNYV 178
K+IG+ + E RA ++P I V RDPRWGR E+ ED +V +
Sbjct: 124 VKRIGEATALEVRATGIQ-----YAFAPCIAVCRDPRWGRCYESYSEDRRIVQSMTELIP 178
Query: 179 RGLQDVEGQENTA-DLSTRPLKVSACCKHYAAYDLDNWKGVDRFHFDSKVTEQDMIETFN 237
DV + KV+AC KH+ + VD + ++ + ++ + +
Sbjct: 179 GLQGDVPKDFTSGMPFVAGKNKVAACAKHFVG----DGGTVDGINENNTIINREGLMNIH 234
Query: 238 LPFEMCVREGDASSVMCSYNRVNGIPTCADSKLLNQTIRGDWNLHGYIVSDCDSIQTIVE 297
+P + S+VM SY+ NG+ A+ L+ ++ G+++SD + I I
Sbjct: 235 MPAYKNAMDKGVSTVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT 294
Query: 298 SHKF-LNDTKEEAVARVLKAGLDLDCGDYYTNFTVGAVQQGKVRETDIDRSLRFLYVVLM 356
+ + + ++ L + + + + G V G + + ID ++ + V
Sbjct: 295 PAGSDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKF 354
Query: 357 RLGYFDGSPQYKSLGKNDICNPQHIELAGEAAAQ 390
+G F+ P + +H +LA EAA +
Sbjct: 355 TMGLFEN-PYADPAMAEQLGKQEHRDLAREAARK 387
|
| >d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} Length = 214 | Back information, alignment and structure |
|---|
| >d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} Length = 330 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 769 | |||
| d1x38a1 | 388 | Beta-D-glucan exohydrolase, N-terminal domain {Bar | 100.0 | |
| d1tr9a_ | 330 | Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: | 100.0 | |
| d1x38a2 | 214 | Beta-D-glucan exohydrolase, C-terminal domain {Bar | 100.0 | |
| d1w8oa1 | 103 | Sialidase, "linker" domain {Micromonospora viridif | 96.77 | |
| d2q3za2 | 114 | Transglutaminase, two C-terminal domains {Human (H | 88.96 | |
| d1g0da2 | 112 | Transglutaminase, two C-terminal domains {Red sea | 85.55 | |
| d1ex0a2 | 112 | Transglutaminase, two C-terminal domains {Human (H | 85.07 | |
| d1vjja2 | 115 | Transglutaminase, two C-terminal domains {Human (H | 84.7 | |
| d1ejxb_ | 101 | Urease, beta-subunit {Klebsiella aerogenes [TaxId: | 83.6 | |
| d2vzsa2 | 122 | Exochitosanase CsxA, domains 2, 4 and 5 {Amycolato | 82.2 | |
| d4ubpb_ | 122 | Urease, beta-subunit {Bacillus pasteurii [TaxId: 1 | 80.44 |
| >d1x38a1 c.1.8.7 (A:1-388) Beta-D-glucan exohydrolase, N-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: (Trans)glycosidases family: NagZ-like domain: Beta-D-glucan exohydrolase, N-terminal domain species: Barley (Hordeum vulgare) [TaxId: 4513]
Probab=100.00 E-value=6.3e-71 Score=610.99 Aligned_cols=348 Identities=28% Similarity=0.451 Sum_probs=280.0
Q ss_pred Cc-ccCCCCChHHHHHHHHhhcCHHHHHHhhcCc---------------------ccCcCCCCcchhHHHhhhccccccc
Q 047862 25 FA-FCDAKLPYPVRAKDLVDRMTLAEKVQQLGDL---------------------AYGVPRLGLPLYEWWSEALHGVSYI 82 (769)
Q Consensus 25 ~~-~~d~~~~~~~rv~~ll~~MTleEKv~ql~~~---------------------~~~i~~lgi~~~~~~~~~~~gv~~~ 82 (769)
+| |+||++|+++||++||++||||||||||++. ...+++++.+...|+ +.+++++..
T Consensus 2 ~~~y~d~~~~~e~Rv~dLl~~MTleEKigQl~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~lq~~ 80 (388)
T d1x38a1 2 YVLYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQ-DMVDGFQKA 80 (388)
T ss_dssp CCGGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHH-HHHHHHHHH
T ss_pred CCCcCCCCCCHHHHHHHHHHCCCHHHHHhhhcccccccCCHHHHHhccccceeecCCcccCCCCCHHHHH-HHHHHHHHH
Confidence 46 9999999999999999999999999999742 234678888876543 333333221
Q ss_pred cccCCCCCcccc-------CC--CCCCcccCchhhHhhhcCCHHHHHHHHHHHHHHHHHhhccCCCccee-ecceecccC
Q 047862 83 GRRTNTPPGTHF-------DS--EVPGATSFPTVILTTASFNESLWKKIGQTVSTEARAMHNLGNAGLTF-WSPNINVVR 152 (769)
Q Consensus 83 ~~~~~~~~g~~~-------~~--~~~~~t~fP~~~~laAt~d~~l~~~~g~~~~~E~ra~~~~g~~G~~~-laP~vdl~r 152 (769)
. ...+.|++. ++ ...+.|.||+++++|||||++|++++|+++|+|+|++ |+|+ |||++||.|
T Consensus 81 ~--~~~~~giPlli~~D~e~G~~~~~~~t~~p~~~~~aat~d~~l~~~~g~~~g~E~ra~------Gin~~~aPv~Dv~~ 152 (388)
T d1x38a1 81 C--MSTRLGIPMIYGIDAVHGQNNVYGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT------GIQYAFAPCIAVCR 152 (388)
T ss_dssp H--HTSSSCCCCEEEECCSSSSTTSTTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT------TCCEECCCBCCCCS
T ss_pred H--HhccCCCCceeecccccCcccccccccchhhhhccccCCHHHHHHHHHHhhHHHHhc------CCccccCCcccccc
Confidence 1 011122220 11 1235789999999999999999999999999999999 8998 999999999
Q ss_pred CCCCCccCCCcCCCHHHHHHHHHHHHhhhccccCCCCccccC--CCCCeeeEeecccccCccCCCCCCccccccccCCHH
Q 047862 153 DPRWGRVMETPGEDPFVVGRYSVNYVRGLQDVEGQENTADLS--TRPLKVSACCKHYAAYDLDNWKGVDRFHFDSKVTEQ 230 (769)
Q Consensus 153 ~p~~gR~~e~fgeDp~l~~~~a~a~v~GlQ~~~g~~~~~~~~--~~~~~V~a~~KHFpg~~~~~~~~~~r~~~~~~~~~~ 230 (769)
||+|||++|+|||||+|+++|+. +|.++|+..+..-...+. .+..+|+||+|||||||.... ++...++.++++
T Consensus 153 ~p~~gr~~et~geDp~l~~~~~~-~v~~~~g~~~~~~~~G~~~~~~~~gV~a~~KHFpG~g~~~~---~~~~~~~~i~~~ 228 (388)
T d1x38a1 153 DPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVPKDFTSGMPFVAGKNKVAACAKHFVGDGGTVD---GINENNTIINRE 228 (388)
T ss_dssp CTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCCTTCCTTCCCCCSTTSCBCEEEEETTGGGCGG---GCTTCEECCCHH
T ss_pred cccccccccCccCCHHHHHHHHh-hhhhhhchhhhhhcccccccccccCcceeeeeeecCCcccc---CccccccchhHH
Confidence 99999999999999999999965 677777642110000000 123469999999999985431 233445678999
Q ss_pred HHHHhccHHHHHHHHcCCCceeeecccccCCccccCCHHHHHHHHHhhcCCCeEEEcCchhHHHhhhhcccccCCHHHHH
Q 047862 231 DMIETFNLPFEMCVREGDASSVMCSYNRVNGIPTCADSKLLNQTIRGDWNLHGYIVSDCDSIQTIVESHKFLNDTKEEAV 310 (769)
Q Consensus 231 ~l~e~~l~pF~~ai~~g~~~~vM~sy~~vng~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~~~~~~~~~~~~~~~~~ea~ 310 (769)
+|+++||+||+.+|++|.. +|||+||.+||+|+|.|+++|+++||++|||+|+|||||++|+++.. ++.....+++
T Consensus 229 ~l~~~~l~pf~~~i~~g~~-~vM~s~~~~~g~pa~~s~~~l~~lLR~~~gF~G~VvSD~~~m~~~~~---~~~~~~~~~~ 304 (388)
T d1x38a1 229 GLMNIHMPAYKNAMDKGVS-TVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITT---PAGSDYSYSV 304 (388)
T ss_dssp HHHHHTSHHHHHHHHTTCC-EEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSS---STTTTHHHHH
T ss_pred HHHHHhhhhhHHHHhhccc-cccccccccCCccccCCHHHHHHHHHhccCCCceeecchhhcccccc---ccCCcHHHHH
Confidence 9999999999999998865 99999999999999999999999999999999999999999998864 3345677889
Q ss_pred HHHHHcCCCCCCCc----chHHHHHHHHHcCCCcHHHHHhHHHHHHHHHHHhcCCCCCCCccCCC-CCCCCCHHHHHHHH
Q 047862 311 ARVLKAGLDLDCGD----YYTNFTVGAVQQGKVRETDIDRSLRFLYVVLMRLGYFDGSPQYKSLG-KNDICNPQHIELAG 385 (769)
Q Consensus 311 ~~al~AG~D~~~~~----~~~~~l~~av~~g~i~~~~id~av~RiL~~k~~~Glf~~~p~~~~~~-~~~v~~~~~~~la~ 385 (769)
+.+++||+||+|.+ .+.+.|.+||++|+|+++|||+||+|||++|+++||||+ | |.+.. ...+++++|+++|+
T Consensus 305 ~~a~~ag~d~~~~~~~~~~~~~~l~~av~~G~i~~~rid~sv~Ril~~k~~lGlfd~-p-~~~~~~~~~i~~~~h~~~a~ 382 (388)
T d1x38a1 305 KASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFEN-P-YADPAMAEQLGKQEHRDLAR 382 (388)
T ss_dssp HHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTTC-C-SCCGGGGGGTTCHHHHHHHH
T ss_pred HHHHhcCCCeecCCccHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCCCC-C-CCChhhhhhcCCHHHHHHHH
Confidence 99999999999853 356789999999999999999999999999999999994 3 44322 34588999999999
Q ss_pred HHHhhc
Q 047862 386 EAAAQG 391 (769)
Q Consensus 386 eaA~eS 391 (769)
++|+||
T Consensus 383 ~aA~~S 388 (388)
T d1x38a1 383 EAARKS 388 (388)
T ss_dssp HHHHHH
T ss_pred HHHhcC
Confidence 999997
|
| >d1tr9a_ c.1.8.7 (A:) Beta-hexosaminidase NagZ {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1x38a2 c.23.11.1 (A:389-602) Beta-D-glucan exohydrolase, C-terminal domain {Barley (Hordeum vulgare) [TaxId: 4513]} | Back information, alignment and structure |
|---|
| >d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain {Micromonospora viridifaciens [TaxId: 1881]} | Back information, alignment and structure |
|---|
| >d2q3za2 b.1.5.1 (A:472-585) Transglutaminase, two C-terminal domains {Human (Homo sapiens), tissue isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g0da2 b.1.5.1 (A:472-583) Transglutaminase, two C-terminal domains {Red sea bream (Chrysophrys major) [TaxId: 143350]} | Back information, alignment and structure |
|---|
| >d1ex0a2 b.1.5.1 (A:516-627) Transglutaminase, two C-terminal domains {Human (Homo sapiens), blood isozyme [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vjja2 b.1.5.1 (A:479-593) Transglutaminase, two C-terminal domains {Human (Homo sapiens), TGase E3 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ejxb_ b.85.3.1 (B:) Urease, beta-subunit {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
| >d2vzsa2 b.1.4.1 (A:778-899) Exochitosanase CsxA, domains 2, 4 and 5 {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
| >d4ubpb_ b.85.3.1 (B:) Urease, beta-subunit {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|