Citrus Sinensis ID: 047865
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 389 | ||||||
| 224112475 | 370 | predicted protein [Populus trichocarpa] | 0.943 | 0.991 | 0.693 | 1e-150 | |
| 255574794 | 436 | conserved hypothetical protein [Ricinus | 0.974 | 0.869 | 0.646 | 1e-145 | |
| 449441298 | 497 | PREDICTED: uncharacterized protein LOC10 | 0.912 | 0.714 | 0.655 | 1e-145 | |
| 18405285 | 427 | uncharacterized protein [Arabidopsis tha | 0.964 | 0.878 | 0.610 | 1e-145 | |
| 334184842 | 441 | uncharacterized protein [Arabidopsis tha | 0.951 | 0.839 | 0.615 | 1e-145 | |
| 297823935 | 427 | hypothetical protein ARALYDRAFT_483062 [ | 0.971 | 0.885 | 0.603 | 1e-144 | |
| 225448469 | 492 | PREDICTED: uncharacterized protein LOC10 | 0.907 | 0.717 | 0.645 | 1e-142 | |
| 255574790 | 469 | conserved hypothetical protein [Ricinus | 0.925 | 0.767 | 0.628 | 1e-142 | |
| 297736593 | 397 | unnamed protein product [Vitis vinifera] | 0.907 | 0.889 | 0.645 | 1e-142 | |
| 356569294 | 473 | PREDICTED: uncharacterized protein LOC10 | 0.907 | 0.746 | 0.638 | 1e-140 |
| >gi|224112475|ref|XP_002316203.1| predicted protein [Populus trichocarpa] gi|222865243|gb|EEF02374.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1386), Expect = e-150, Method: Compositional matrix adjust.
Identities = 262/378 (69%), Positives = 304/378 (80%), Gaps = 11/378 (2%)
Query: 12 PEVEDKANQDRKVVLPLEKCDIFAGKWVLDNVTHPLYKEDECEFLTEWVTCLRNGRPDSL 71
P VE K + D K+ L E+CDIF G WVLDN THPLYKED CEFL+EWV CLRNGR DSL
Sbjct: 4 PAVE-KEDADEKIALQPEECDIFTGHWVLDNKTHPLYKEDGCEFLSEWVRCLRNGRRDSL 62
Query: 72 YQKWRWQPTDCSLPRFDAKLLLNKLRGKRLMLVGDSIHYNQWQSLVCMVQSVIPPGKKSL 131
YQ WRWQP DCSLP+F+ KLLL KL+GKRLM VGDSIH+NQWQSL+C+VQS IPPGKKSL
Sbjct: 63 YQNWRWQPRDCSLPKFEPKLLLEKLKGKRLMFVGDSIHFNQWQSLICLVQSAIPPGKKSL 122
Query: 132 RYISTQTTAFTLEVLLTILSFSDYNATLEFYWAPFLVESNADPPTMRDGKLDPVVMPESI 191
Y S +T+ DYNATLEFYWAPFLVESN+DPPTMRDGK D ++MPESI
Sbjct: 123 DYAS----------YITVFKIEDYNATLEFYWAPFLVESNSDPPTMRDGKSDAIIMPESI 172
Query: 192 TKHGQNWKGVDYLIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDMYTVYEKTLRAWGKW 251
+KHG+NWK VDYLIFNTY WW KYPTMKVLRGSFDEG EYDEI+ + YE+ LR W KW
Sbjct: 173 SKHGRNWKDVDYLIFNTYNWWLKYPTMKVLRGSFDEGTAEYDEIERHIAYERVLRTWAKW 232
Query: 252 VEENVNPNLTSVFFSSAAPKHVRSSDRNNVNGVKCVEETTPIFNRTTRLEVGTNQQLFAI 311
VEENV+P TS+F+SS P+H RSSD N+ +G+ C +ET PI NRTT ++V T++Q+FAI
Sbjct: 233 VEENVDPTRTSIFYSSLFPQHFRSSDWNSPDGINCAKETMPILNRTTPVDVSTDRQVFAI 292
Query: 312 AANVTQSMEVPVHFLNITSLSEYRKDAHTSVYGTAAGKMLLPEQISEPTTYADCLHWCLP 371
AANVT+SM+VPVHFLN+T+LSEYRKDAHTSVY GK+L EQ S P YADCLHWCLP
Sbjct: 293 AANVTRSMKVPVHFLNVTTLSEYRKDAHTSVYTARDGKLLSLEQRSNPGVYADCLHWCLP 352
Query: 372 GLPDTWNELVYARIVSGS 389
G+PDTWNEL+YARI++ S
Sbjct: 353 GVPDTWNELLYARIIALS 370
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255574794|ref|XP_002528304.1| conserved hypothetical protein [Ricinus communis] gi|223532259|gb|EEF34062.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449441298|ref|XP_004138419.1| PREDICTED: uncharacterized protein LOC101203137 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|18405285|ref|NP_565924.1| uncharacterized protein [Arabidopsis thaliana] gi|15983771|gb|AAL10482.1| At2g40160/T7M7.25 [Arabidopsis thaliana] gi|21360563|gb|AAM47478.1| At2g40160/T7M7.25 [Arabidopsis thaliana] gi|330254696|gb|AEC09790.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|334184842|ref|NP_001189720.1| uncharacterized protein [Arabidopsis thaliana] gi|330254697|gb|AEC09791.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297823935|ref|XP_002879850.1| hypothetical protein ARALYDRAFT_483062 [Arabidopsis lyrata subsp. lyrata] gi|297325689|gb|EFH56109.1| hypothetical protein ARALYDRAFT_483062 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|225448469|ref|XP_002269697.1| PREDICTED: uncharacterized protein LOC100243314 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255574790|ref|XP_002528302.1| conserved hypothetical protein [Ricinus communis] gi|223532257|gb|EEF34060.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|297736593|emb|CBI25464.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356569294|ref|XP_003552838.1| PREDICTED: uncharacterized protein LOC100785597 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 389 | ||||||
| TAIR|locus:2082078 | 487 | ESK1 "ESKIMO 1" [Arabidopsis t | 0.971 | 0.776 | 0.568 | 1.3e-123 | |
| TAIR|locus:2065069 | 424 | TBL28 "TRICHOME BIREFRINGENCE- | 0.907 | 0.832 | 0.575 | 6.9e-118 | |
| TAIR|locus:2179172 | 434 | TBL3 "TRICHOME BIREFRINGENCE-L | 0.886 | 0.794 | 0.417 | 2.8e-82 | |
| TAIR|locus:2063125 | 425 | TBL33 "AT2G40320" [Arabidopsis | 0.884 | 0.809 | 0.406 | 6.3e-76 | |
| TAIR|locus:2057145 | 410 | TBL34 "AT2G38320" [Arabidopsis | 0.886 | 0.841 | 0.394 | 3.1e-74 | |
| TAIR|locus:2088659 | 556 | TBL1 "AT3G12060" [Arabidopsis | 0.930 | 0.651 | 0.365 | 8.5e-65 | |
| TAIR|locus:2080280 | 379 | TBL36 "AT3G54260" [Arabidopsis | 0.429 | 0.440 | 0.427 | 1.1e-62 | |
| TAIR|locus:2170184 | 608 | TBR [Arabidopsis thaliana (tax | 0.884 | 0.565 | 0.356 | 9e-61 | |
| TAIR|locus:2182157 | 464 | TBL11 "TRICHOME BIREFRINGENCE- | 0.856 | 0.717 | 0.373 | 1.6e-56 | |
| TAIR|locus:2155874 | 457 | TBL4 "AT5G49340" [Arabidopsis | 0.907 | 0.772 | 0.346 | 2.5e-56 |
| TAIR|locus:2082078 ESK1 "ESKIMO 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1215 (432.8 bits), Expect = 1.3e-123, P = 1.3e-123
Identities = 223/392 (56%), Positives = 280/392 (71%)
Query: 1 PQHQEFAQEAE-PEVE-DKANQDRK-VVLPLEKCDIFAGKWVLDNVTHPLYKEDECEFLT 57
P +E ++ E ++E A +D + V LP E+CD+F G+WV DN THPLYKED+CEFLT
Sbjct: 107 PVQEEVSKTEEVKKIELFAATEDEEDVELPPEECDLFTGEWVFDNETHPLYKEDQCEFLT 166
Query: 58 EWVTCLRNGRPDSLYQKWRWQPTDCSLPRFDAXXXXXXXXXXXXXXVGDSIHYNQWQSLV 117
VTC+RNGR DSLYQ WRWQP DCSLP+F A VGDS++ NQW+S+V
Sbjct: 167 AQVTCMRNGRRDSLYQNWRWQPRDCSLPKFKAKLLLEKLRNKRMMFVGDSLNRNQWESMV 226
Query: 118 CMVQSVIPPGKKSLRYISTQTTAFTLEVLLTILSFSDYNATLEFYWAPFLVESNADPPTM 177
C+VQSV+PPG+KSL + L++ DYNAT+EFYWAPFLVESN+D P M
Sbjct: 227 CLVQSVVPPGRKSLNKTGS----------LSVFRVEDYNATVEFYWAPFLVESNSDDPNM 276
Query: 178 RDGKLDPVVMPESITKHGQNWKGVDYLIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDM 237
L+ ++MPESI KHG NWKGVD+L+FNTYIWW MKVLRGSFD+G TEY+EI+
Sbjct: 277 HS-ILNRIIMPESIEKHGVNWKGVDFLVFNTYIWWMNTFAMKVLRGSFDKGDTEYEEIER 335
Query: 238 YTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKHVRSSDRNNVNGVKCVEETTPIFNRT 297
Y + +R WG WVE N++P T+VFF+S +P H++S D N +G+KC ETTPI N +
Sbjct: 336 PVAYRRVMRTWGDWVERNIDPLRTTVFFASMSPLHIKSLDWENPDGIKCALETTPILNMS 395
Query: 298 TRLEVGTNQQLFAIAANVTQSMEVPVHFLNITSLSEYRKDAHTSVYGTAAGKMLLPEQIS 357
VGT+ +LF++A NVT S+ VPV+FLNIT LSEYRKDAHTSV+ GKML PEQ +
Sbjct: 396 MPFSVGTDYRLFSVAENVTHSLNVPVYFLNITKLSEYRKDAHTSVHTIRQGKMLTPEQQA 455
Query: 358 EPTTYADCLHWCLPGLPDTWNELVYARIVSGS 389
+P TYADC+HWCLPGLPDTWNE +Y RI+S S
Sbjct: 456 DPNTYADCIHWCLPGLPDTWNEFLYTRIISRS 487
|
|
| TAIR|locus:2065069 TBL28 "TRICHOME BIREFRINGENCE-LIKE 28" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2179172 TBL3 "TRICHOME BIREFRINGENCE-LIKE 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2063125 TBL33 "AT2G40320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2057145 TBL34 "AT2G38320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2088659 TBL1 "AT3G12060" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2080280 TBL36 "AT3G54260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2170184 TBR [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2182157 TBL11 "TRICHOME BIREFRINGENCE-LIKE 11" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2155874 TBL4 "AT5G49340" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 389 | |||
| pfam13839 | 270 | pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Estera | 6e-93 | |
| PLN02629 | 387 | PLN02629, PLN02629, powdery mildew resistance 5 | 2e-84 | |
| pfam14416 | 55 | pfam14416, PMR5N, PMR5 N terminal Domain | 4e-25 |
| >gnl|CDD|222410 pfam13839, PC-Esterase, GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
Score = 279 bits (716), Expect = 6e-93
Identities = 118/304 (38%), Positives = 153/304 (50%), Gaps = 36/304 (11%)
Query: 84 LPRFDAKLLLNKLRGKRLMLVGDSIHYNQWQSLVCMVQSVIPPGKKSLRYISTQTTAFTL 143
LPRFDA+ L +LRGKR++ VGDS+ NQW+SLVC++ V PP K+
Sbjct: 1 LPRFDAQQFLERLRGKRVVFVGDSLSRNQWESLVCLLSQVEPPKGKT----------LER 50
Query: 144 EVLLTILSFSDYNATLEFYWAPFLVESNADPPTMRDGKLDPVVMPESITKHGQNWKGVDY 203
+ L F DYN T+EFYW+PFLVES+ R KLD K + W G D
Sbjct: 51 DGRLFRFRFKDYNVTIEFYWSPFLVESDNAEEGKRVLKLD-----SIDEKWSKLWPGADV 105
Query: 204 LIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDMYTVYEKTLRAWGKWVEENVNPNLTSV 263
L+FN+ WW KV G + Y E+ Y K L W KWV+ N+ P+ T V
Sbjct: 106 LVFNSGHWWLHR---KVYIGWDYCQKSNYKEMGFLDAYRKALETWAKWVDVNLPPSKTRV 162
Query: 264 FFSSAAPKHVRSSDRNNVNGVKCVEETTPIFNRTTRLEVGTNQQLFAIAANVTQ--SMEV 321
FF + +P H + N G C ET P+ + G ++ I V +M+
Sbjct: 163 FFRTFSPVHFEGGEWN--TGGSCY-ETEPLLGSEYK---GLTPEMIDIVNEVLSRAAMKT 216
Query: 322 PVHFLNITSLSEYRKDAHTSVYGTAAGKMLLPEQISEPTTYADCLHWCLPGLPDTWNELV 381
PV L+IT LS+YRKD H SVY DCLHWCLPG+PDTWNEL+
Sbjct: 217 PVKLLDITLLSQYRKDGHPSVYRKPGPPKK----------EQDCLHWCLPGVPDTWNELL 266
Query: 382 YARI 385
A +
Sbjct: 267 LALL 270
|
The PC-Esterase family is comprised of Cas1p, the Homo sapiens C7orf58, Arabidopsis thaliana PMR5 and a group of plant freezing resistance/coldacclimatization proteins typified by Arabidopsis thaliana ESKIMO1, animal FAM55D proteins, and animal FAM113 proteins. The PC-Esterase family has features that are both similar and different from the canonical GDSL/SGNH superfamily. The members of this family are predicted to have Acyl esterase activity and predicted to modify cell-surface biopolymers such as glycans and glycoproteins. The Cas1p protein has a Cas1_AcylT domain, in addition, with the opposing acyltransferase activity. The C7orf58 family has a ATP-Grasp domain fused to the PC-Esterase and is the first identified secreted tubulin-tyrosine ligase like enzyme in eukaryotes. The plant family with PMR5, ESK1, TBL3 etc have a N-terminal C rich potential sugar binding domain followed by the PC-Esterase domain. Length = 270 |
| >gnl|CDD|215338 PLN02629, PLN02629, powdery mildew resistance 5 | Back alignment and domain information |
|---|
| >gnl|CDD|206583 pfam14416, PMR5N, PMR5 N terminal Domain | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 389 | |||
| PLN02629 | 387 | powdery mildew resistance 5 | 100.0 | |
| PF13839 | 263 | PC-Esterase: GDSL/SGNH-like Acyl-Esterase family f | 100.0 | |
| PF14416 | 55 | PMR5N: PMR5 N terminal Domain | 99.94 | |
| cd01842 | 183 | SGNH_hydrolase_like_5 SGNH_hydrolase subfamily. SG | 97.51 |
| >PLN02629 powdery mildew resistance 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-115 Score=867.15 Aligned_cols=333 Identities=39% Similarity=0.782 Sum_probs=292.7
Q ss_pred CCCCcCccCeeeeCCCCCCCcCCCCCc-ccccccccccCCCCCcccceeeeecCCCCCCccCHHHHHHHhcCCeEEEEec
Q 047865 28 LEKCDIFAGKWVLDNVTHPLYKEDECE-FLTEWVTCLRNGRPDSLYQKWRWQPTDCSLPRFDAKLLLNKLRGKRLMLVGD 106 (389)
Q Consensus 28 ~~~Cd~~~G~WV~d~~~~PlY~~~~Cp-~i~~~~~C~~nGRpD~~yl~WrWqP~~C~Lprfd~~~fl~~lrgk~l~FVGD 106 (389)
.+.||||+|+||+|+. +|||++++|| ||+++|||++|||||++|++|||||++|+||||||.+||++|||||||||||
T Consensus 50 ~~~CD~f~G~WV~D~s-~PlY~~~~Cp~fi~~~~nC~knGRPD~~Yl~WRWqP~gC~LPRFda~~fLe~~RgKrl~FVGD 128 (387)
T PLN02629 50 QSTCALFVGTWVRDDS-YPLYQSSDCPGVIDPEFNCQMYGRPDSDYLKYRWQPLNCELPRFNGLEFLLKMKGKTVMFVGD 128 (387)
T ss_pred ccccCCCCCeEecCCC-CCCCCCCCCccccccccchhhcCCCCcchhhccccCCCCCCCCcCHHHHHHHhcCCeEEEecc
Confidence 6889999999999985 9999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhhhhcCCCCceeeeecCceeeEEEeeceeeeeeccccceEEEEEecccccccCCCCCCCCCCCCCccc
Q 047865 107 SIHYNQWQSLVCMVQSVIPPGKKSLRYISTQTTAFTLEVLLTILSFSDYNATLEFYWAPFLVESNADPPTMRDGKLDPVV 186 (389)
Q Consensus 107 Sl~Rnq~~SL~ClL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~n~tv~f~wspfLv~~~~~~~~~~~g~~~~~l 186 (389)
||+|||||||+|||+++++..++.+...+ +...|+ |++||+||+||||||||+.+... ..++|
T Consensus 129 SL~RNQ~eSLvClL~~~~p~~~~~~~~~~-~~~~~~---------F~~yN~TV~~ywspfLV~~~~~~-------~~~~l 191 (387)
T PLN02629 129 SLGRNQWESLICLISSSVPSTRTQMSRGD-PLSTFK---------FLDYGVSISFYKAPYLVDIDAVQ-------GKRVL 191 (387)
T ss_pred ccchhHHHHHHHHhhccCCCCceeeecCC-ceEEEE---------eccCCEEEEEEecceEEeeecCC-------CceeE
Confidence 99999999999999998876655555444 556666 99999999999999999986532 13467
Q ss_pred ccccccccCCCCccccEEEEecccccccCCCceeccceecCCCccccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEe
Q 047865 187 MPESITKHGQNWKGVDYLIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDMYTVYEKTLRAWGKWVEENVNPNLTSVFFS 266 (389)
Q Consensus 187 ~~~~ld~~~~~w~~~DvlV~ntG~Ww~~~~~~~~~~g~~~~~~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vffR 266 (389)
++|.+|+.+..|.++|||||||||||.+++.++. ++++++|..++++|++.+||++||+||++||++++++.+++||||
T Consensus 192 ~LD~id~~a~~w~~~DvlVfntghWw~~~~~~~~-~~~~~~g~~~~~~~~~~~A~r~al~T~~~wv~~~~~~~kt~vffr 270 (387)
T PLN02629 192 KLEEISGNANAWRDADVLIFNTGHWWSHQGSLQG-WDYIESGGTYYQDMDRLVALEKALRTWAYWVDTNVDRSRTRVFFQ 270 (387)
T ss_pred EecCcchhhhhhccCCEEEEeCccccCCCCeeEE-eeeeccCCccccCccHHHHHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 8888988888999999999999999999865433 467788888899999999999999999999999999999999999
Q ss_pred ecCCCCcccCCCCCC---CCCCCCCccccCCCCccccccCCcHHHHHHHHHHHhcCCcceEEeeccccccccccCCCCCc
Q 047865 267 SAAPKHVRSSDRNNV---NGVKCVEETTPIFNRTTRLEVGTNQQLFAIAANVTQSMEVPVHFLNITSLSEYRKDAHTSVY 343 (389)
Q Consensus 267 t~SP~Hf~~g~Wn~~---~gG~C~~~T~P~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~lLDIT~ls~~R~DgHps~y 343 (389)
|+||+||+||+||+. .+|+|+++|+|+.++++ . +....+++++++++++++.+|+|||||.||++|||||||+|
T Consensus 271 T~SP~Hfe~g~Wn~gg~~~~~~C~~et~P~~~~~~-~--~~~~~~~~~ve~v~~~~~~~v~lLDIT~ls~lR~DgHPs~Y 347 (387)
T PLN02629 271 SISPTHYNPSEWSAGASTTTKNCYGETTPMSGMTY-P--GAYPDQMRVVDEVIRGMHNPAYLLDITLLSELRKDGHPSIY 347 (387)
T ss_pred ecCcccccCCCcCCCCCCCCCCCccCCccCcCccc-c--CcchHHHHHHHHHHHhcCCceEEEechhhhhcCCCCCcccc
Confidence 999999999999931 13579989999986543 2 33344556888888889999999999999999999999999
Q ss_pred CCccCCCCCccccCCCCCCCCcccccCCCchhHHHHHHHHHHh
Q 047865 344 GTAAGKMLLPEQISEPTTYADCLHWCLPGLPDTWNELVYARIV 386 (389)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~DClHWCLPGv~DtWNelL~~~L~ 386 (389)
+.. ++++++.++..++||+||||||||||||||||++|+
T Consensus 348 ~~~----~~~~~~~~p~~~~DC~HWCLPGvpDTWNelL~a~L~ 386 (387)
T PLN02629 348 SGD----LSPSQRANPDRSADCSHWCLPGLPDTWNQLFYTALF 386 (387)
T ss_pred cCC----CchhhccCCCCCCCcccccCCCCCccHHHHHHHHHh
Confidence 753 345666677788999999999999999999999997
|
|
| >PF13839 PC-Esterase: GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | Back alignment and domain information |
|---|
| >PF14416 PMR5N: PMR5 N terminal Domain | Back alignment and domain information |
|---|
| >cd01842 SGNH_hydrolase_like_5 SGNH_hydrolase subfamily | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 389 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 5e-04
Identities = 36/295 (12%), Positives = 84/295 (28%), Gaps = 84/295 (28%)
Query: 35 AGKWVL-DNVTHPLYKEDECEFLTEWVTCLRNGRPDSLYQK-----WRWQPTDCSLPRFD 88
+GK + +V + + +F W+ P+++ + ++ P S
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS 220
Query: 89 AKLLLN----KLRGKRLM---------LVGDSIHYNQW---------QSLV----CMVQS 122
+ + L + +RL+ LV ++ N + L+ V
Sbjct: 221 SNIKLRIHSIQAELRRLLKSKPYENCLLVLLNV-QNAKAWNAFNLSCKILLTTRFKQVTD 279
Query: 123 VIPPGKKSLRYISTQTTAFTLEVLLTILSFSDYNATLEFYWAPFLVESNAD-PPTMRDGK 181
+ + + + T + + ++L +L D P +
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLL-------------LKYLDCRPQDLPREVLTT- 325
Query: 182 LDPVVM---PESITKHGQNWKGVDYLIFNTYIWWTKYPTMK---VLRGSFDEGATEYDEI 235
+P + ESI W D W K ++ S + +
Sbjct: 326 -NPRRLSIIAESIRDGLATW---DN--------WKHVNCDKLTTIIESSLN----VLEPA 369
Query: 236 DMYTVYE-------------KTL-RAWGKWVEENVNPNLTSVFFSSAAPKHVRSS 276
+ +++ L W ++ +V + + S K + S
Sbjct: 370 EYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKES 424
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 389 | |||
| 4h08_A | 200 | Putative hydrolase; GDSL-like lipase/acylhydrolase | 80.35 |
| >4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=80.35 E-value=1.7 Score=37.48 Aligned_cols=51 Identities=14% Similarity=0.186 Sum_probs=34.9
Q ss_pred cccEEEEecccccccCCCceeccceecCCCccccccCHHHHHHHHHHHHHHHHHhhcCCCcceEEEeecCCCCc
Q 047865 200 GVDYLIFNTYIWWTKYPTMKVLRGSFDEGATEYDEIDMYTVYEKTLRAWGKWVEENVNPNLTSVFFSSAAPKHV 273 (389)
Q Consensus 200 ~~DvlV~ntG~Ww~~~~~~~~~~g~~~~~~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vffRt~SP~Hf 273 (389)
.+|+|||+.|..=.. ...+.|+..|+++++.+.+. ...++++|-+..|-..
T Consensus 74 ~pd~Vvi~~G~ND~~---------------------~~~~~~~~~l~~ii~~l~~~--~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD---------------------YTEEEYDKSFPKLIKIIRKY--APKAKLIWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSSCTT---------------------SCHHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCEE
T ss_pred CCCeEEEEeeeCCCC---------------------CCHHHHHHHHHHHHHHHhhh--CCCccEEEeccCCCcc
Confidence 479999988854110 12356888888888877653 3466888888888653
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 389 | |||
| d3dc7a1 | 207 | Uncharacterized protein Lp3323 {Lactobacillus plan | 85.53 | |
| d3bzwa1 | 248 | Uncharacterized protein BT2961 {Bacteroides thetai | 83.67 | |
| d1pvva2 | 163 | Ornithine transcarbamoylase {Archaeon Pyrococcus f | 81.02 |
| >d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: SGNH hydrolase family: BT2961-like domain: Uncharacterized protein Lp3323 species: Lactobacillus plantarum [TaxId: 1590]
Probab=85.53 E-value=0.12 Score=42.58 Aligned_cols=15 Identities=40% Similarity=0.388 Sum_probs=12.7
Q ss_pred hcCCeEEEEechhhH
Q 047865 96 LRGKRLMLVGDSIHY 110 (389)
Q Consensus 96 lrgk~l~FVGDSl~R 110 (389)
+..|||+|+|||++-
T Consensus 2 ~~~kri~~iGDSit~ 16 (207)
T d3dc7a1 2 VSFKRPAWLGDSITA 16 (207)
T ss_dssp BCCSSEEEEESTTTS
T ss_pred CCCCEEEEEehHhhc
Confidence 457899999999984
|
| >d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
| >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|